Query 020756
Match_columns 321
No_of_seqs 276 out of 2312
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 07:43:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020756.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020756hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 99.9 6.4E-24 2.2E-28 194.7 25.8 202 2-229 99-308 (321)
2 4gqb_B Methylosome protein 50; 99.9 1.9E-22 6.4E-27 187.2 25.7 200 3-228 101-316 (344)
3 1got_B GT-beta; complex (GTP-b 99.9 5E-21 1.7E-25 176.3 28.5 214 2-229 74-330 (340)
4 2ymu_A WD-40 repeat protein; u 99.9 2.6E-21 8.9E-26 189.1 27.4 198 3-229 364-567 (577)
5 1vyh_C Platelet-activating fac 99.9 6.9E-21 2.4E-25 180.2 26.6 203 2-230 127-357 (410)
6 3ow8_A WD repeat-containing pr 99.9 8.8E-21 3E-25 173.8 26.4 174 2-201 141-319 (321)
7 2ynn_A Coatomer subunit beta'; 99.9 1.5E-20 5.2E-25 170.4 27.5 198 2-225 74-284 (304)
8 1vyh_C Platelet-activating fac 99.9 7.9E-21 2.7E-25 179.8 25.8 202 2-229 169-398 (410)
9 4h5i_A Guanine nucleotide-exch 99.9 6.6E-21 2.3E-25 177.8 24.3 174 3-202 155-342 (365)
10 2ynn_A Coatomer subunit beta'; 99.9 1.5E-20 5E-25 170.5 25.1 202 2-229 32-246 (304)
11 2xzm_R RACK1; ribosome, transl 99.9 1.6E-20 5.5E-25 173.0 25.6 201 2-229 95-327 (343)
12 3frx_A Guanine nucleotide-bind 99.9 3.4E-20 1.1E-24 169.4 27.1 205 2-229 37-255 (319)
13 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.4E-20 4.8E-25 173.8 24.4 203 2-229 35-270 (345)
14 3frx_A Guanine nucleotide-bind 99.9 8.7E-20 3E-24 166.6 27.9 200 2-229 84-304 (319)
15 2pbi_B Guanine nucleotide-bind 99.9 1.6E-19 5.5E-24 167.5 28.7 205 2-229 125-344 (354)
16 2ymu_A WD-40 repeat protein; u 99.9 7.3E-20 2.5E-24 178.8 27.4 198 3-229 323-526 (577)
17 1gxr_A ESG1, transducin-like e 99.9 2.5E-19 8.4E-24 162.0 28.0 203 4-229 71-283 (337)
18 2xzm_R RACK1; ribosome, transl 99.9 1.8E-19 6.1E-24 166.0 27.4 203 2-228 46-272 (343)
19 1got_B GT-beta; complex (GTP-b 99.9 6.8E-20 2.3E-24 168.7 24.5 172 3-200 162-340 (340)
20 1erj_A Transcriptional repress 99.9 1.4E-19 4.7E-24 170.1 26.7 201 3-229 83-328 (393)
21 3dwl_C Actin-related protein 2 99.9 4.8E-21 1.6E-25 177.3 16.5 201 2-229 30-269 (377)
22 1gxr_A ESG1, transducin-like e 99.9 3.7E-19 1.3E-23 160.8 28.1 201 3-229 117-324 (337)
23 4g56_B MGC81050 protein; prote 99.9 2.2E-20 7.4E-25 173.7 20.1 201 3-229 113-330 (357)
24 1k8k_C P40, ARP2/3 complex 41 99.9 1.3E-19 4.5E-24 166.5 24.7 202 2-229 27-262 (372)
25 2hes_X YDR267CP; beta-propelle 99.9 3.4E-19 1.2E-23 163.5 27.3 202 2-228 31-266 (330)
26 4ery_A WD repeat-containing pr 99.9 2.4E-19 8.3E-24 162.1 26.0 202 2-229 84-297 (312)
27 1erj_A Transcriptional repress 99.9 2.3E-19 8E-24 168.5 26.6 194 2-222 142-363 (393)
28 3iz6_a 40S ribosomal protein R 99.9 1.6E-19 5.4E-24 168.9 25.0 213 2-229 85-362 (380)
29 2pm7_B Protein transport prote 99.9 1.6E-19 5.4E-24 163.1 24.0 204 2-229 28-272 (297)
30 1nr0_A Actin interacting prote 99.9 1.8E-19 6.1E-24 179.1 26.4 205 3-229 79-342 (611)
31 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.1E-19 3.6E-24 167.9 23.1 177 30-229 18-212 (345)
32 2pbi_B Guanine nucleotide-bind 99.8 4.3E-19 1.5E-23 164.6 26.8 204 2-229 83-302 (354)
33 1nr0_A Actin interacting prote 99.8 9.9E-20 3.4E-24 180.9 23.4 201 4-229 38-257 (611)
34 4h5i_A Guanine nucleotide-exch 99.8 1.1E-19 3.6E-24 169.6 22.1 208 3-230 102-331 (365)
35 4gqb_B Methylosome protein 50; 99.8 7.7E-20 2.6E-24 169.5 21.1 180 2-206 146-334 (344)
36 3vl1_A 26S proteasome regulato 99.8 1.3E-19 4.6E-24 169.8 21.2 200 3-229 76-309 (420)
37 4ery_A WD repeat-containing pr 99.8 1.3E-18 4.5E-23 157.2 26.9 179 2-206 42-227 (312)
38 3dm0_A Maltose-binding peripla 99.8 3.6E-19 1.2E-23 179.1 25.4 201 2-229 449-680 (694)
39 1k8k_C P40, ARP2/3 complex 41 99.8 2.5E-19 8.6E-24 164.6 22.3 177 2-203 71-274 (372)
40 3zwl_B Eukaryotic translation 99.8 7.7E-19 2.6E-23 160.5 25.4 203 2-229 51-277 (369)
41 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.3E-19 2.5E-23 166.9 26.0 199 5-223 203-409 (415)
42 3dm0_A Maltose-binding peripla 99.8 4E-19 1.4E-23 178.7 25.5 205 2-229 402-620 (694)
43 3zwl_B Eukaryotic translation 99.8 1.5E-18 5.1E-23 158.5 27.1 208 2-229 93-333 (369)
44 4g56_B MGC81050 protein; prote 99.8 1.4E-19 4.9E-24 168.1 20.2 177 2-202 158-342 (357)
45 4aez_A CDC20, WD repeat-contai 99.8 9.4E-19 3.2E-23 164.4 25.9 204 3-229 154-367 (401)
46 1sq9_A Antiviral protein SKI8; 99.8 9.6E-19 3.3E-23 162.5 24.2 197 2-224 88-367 (397)
47 3iz6_a 40S ribosomal protein R 99.8 7.5E-19 2.6E-23 164.3 22.9 177 2-204 177-376 (380)
48 3ei3_B DNA damage-binding prot 99.8 2.3E-18 7.8E-23 160.0 26.0 174 3-202 94-281 (383)
49 2aq5_A Coronin-1A; WD40 repeat 99.8 1.4E-18 4.8E-23 162.9 24.6 206 2-227 54-283 (402)
50 2aq5_A Coronin-1A; WD40 repeat 99.8 1.3E-18 4.3E-23 163.3 24.3 210 2-229 101-331 (402)
51 2xyi_A Probable histone-bindin 99.8 1.7E-18 5.7E-23 164.5 25.3 204 2-227 148-394 (430)
52 4aez_A CDC20, WD repeat-contai 99.8 2.9E-18 9.8E-23 161.1 26.4 202 2-228 110-320 (401)
53 3lrv_A PRE-mRNA-splicing facto 99.8 3.6E-19 1.2E-23 163.8 19.5 204 2-228 55-277 (343)
54 3dw8_B Serine/threonine-protei 99.8 3.3E-19 1.1E-23 168.3 19.7 153 27-204 176-374 (447)
55 3jrp_A Fusion protein of prote 99.8 1.5E-18 5.3E-23 159.3 23.5 203 3-229 31-274 (379)
56 1r5m_A SIR4-interacting protei 99.8 9.6E-19 3.3E-23 162.9 21.7 200 2-229 168-412 (425)
57 2hes_X YDR267CP; beta-propelle 99.8 4.3E-18 1.5E-22 156.1 25.6 181 19-224 5-210 (330)
58 3bg1_A Protein SEC13 homolog; 99.8 6.9E-19 2.3E-23 160.4 20.0 202 2-229 32-280 (316)
59 3vl1_A 26S proteasome regulato 99.8 1.3E-18 4.5E-23 163.0 21.1 200 3-229 117-352 (420)
60 3mmy_A MRNA export factor; mRN 99.8 2.2E-18 7.6E-23 157.4 22.0 191 18-229 29-333 (368)
61 1r5m_A SIR4-interacting protei 99.8 1.9E-18 6.4E-23 160.9 21.7 175 2-203 224-425 (425)
62 2vdu_B TRNA (guanine-N(7)-)-me 99.8 6.6E-18 2.3E-22 161.1 25.8 193 3-222 123-365 (450)
63 2hqs_A Protein TOLB; TOLB, PAL 99.8 6.7E-18 2.3E-22 160.2 25.7 208 5-229 159-371 (415)
64 3dw8_B Serine/threonine-protei 99.8 1.5E-18 5.1E-23 163.8 21.0 138 79-229 174-360 (447)
65 1l0q_A Surface layer protein; 99.8 2E-17 6.9E-22 153.6 28.2 203 3-229 10-217 (391)
66 3dwl_C Actin-related protein 2 99.8 4.5E-19 1.5E-23 164.0 16.5 184 25-229 8-223 (377)
67 4aow_A Guanine nucleotide-bind 99.8 1.7E-17 5.8E-22 150.4 26.4 203 2-229 105-324 (340)
68 1sq9_A Antiviral protein SKI8; 99.8 2.3E-18 7.8E-23 160.0 20.7 203 2-229 33-309 (397)
69 3ei3_B DNA damage-binding prot 99.8 2.6E-18 9E-23 159.5 21.1 186 20-229 65-269 (383)
70 3i2n_A WD repeat-containing pr 99.8 3.6E-18 1.2E-22 155.7 21.3 199 3-227 88-337 (357)
71 4gga_A P55CDC, cell division c 99.8 1.6E-17 5.5E-22 157.0 26.4 227 2-238 122-392 (420)
72 2j04_B YDR362CP, TAU91; beta p 99.8 1.9E-18 6.4E-23 169.2 20.4 200 3-229 181-415 (524)
73 3mkq_A Coatomer beta'-subunit; 99.8 7.1E-18 2.4E-22 171.3 25.2 199 2-226 74-285 (814)
74 3f3f_A Nucleoporin SEH1; struc 99.8 1.3E-17 4.5E-22 150.3 23.8 181 2-203 30-337 (351)
75 3mkq_A Coatomer beta'-subunit; 99.8 5.5E-18 1.9E-22 172.1 23.0 201 3-229 33-246 (814)
76 2j04_A TAU60, YPL007P, hypothe 99.8 2E-18 6.9E-23 168.4 18.9 191 22-229 9-242 (588)
77 3k26_A Polycomb protein EED; W 99.8 2.3E-18 8E-23 157.3 18.3 200 2-229 92-353 (366)
78 2pm9_A Protein WEB1, protein t 99.8 5.4E-18 1.8E-22 158.2 20.1 204 3-229 87-324 (416)
79 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.3E-17 4.3E-22 159.1 22.6 179 30-229 104-325 (450)
80 2pm7_B Protein transport prote 99.8 2.3E-17 8E-22 148.8 22.9 174 27-223 8-216 (297)
81 4e54_B DNA damage-binding prot 99.8 1.5E-18 5E-23 165.1 15.5 199 3-227 140-360 (435)
82 3vu4_A KMHSV2; beta-propeller 99.8 1.5E-17 5.2E-22 154.2 21.9 169 3-203 79-271 (355)
83 1l0q_A Surface layer protein; 99.8 8.8E-17 3E-21 149.3 27.0 203 3-227 52-259 (391)
84 2pm9_A Protein WEB1, protein t 99.8 3.4E-18 1.2E-22 159.6 17.5 179 2-203 133-337 (416)
85 3f3f_A Nucleoporin SEH1; struc 99.8 3.4E-17 1.1E-21 147.6 23.0 183 26-229 9-324 (351)
86 3jrp_A Fusion protein of prote 99.8 2.5E-17 8.5E-22 151.2 21.9 189 20-229 3-227 (379)
87 4e54_B DNA damage-binding prot 99.8 4.4E-18 1.5E-22 161.7 17.0 183 24-229 115-314 (435)
88 4aow_A Guanine nucleotide-bind 99.8 3.1E-16 1.1E-20 142.1 28.4 203 2-227 58-272 (340)
89 4gga_A P55CDC, cell division c 99.8 9E-17 3.1E-21 151.8 25.4 179 3-202 207-394 (420)
90 3sfz_A APAF-1, apoptotic pepti 99.8 4.2E-17 1.5E-21 173.4 25.4 204 2-229 634-900 (1249)
91 2j04_A TAU60, YPL007P, hypothe 99.8 8.4E-18 2.9E-22 164.1 17.6 171 28-229 85-285 (588)
92 3jro_A Fusion protein of prote 99.8 2.5E-17 8.6E-22 167.7 21.5 204 2-229 28-272 (753)
93 2ojh_A Uncharacterized protein 99.8 1.1E-16 3.8E-21 141.2 23.0 204 2-229 19-234 (297)
94 3i2n_A WD repeat-containing pr 99.8 1.8E-16 6.2E-21 144.4 24.8 200 4-229 43-278 (357)
95 3odt_A Protein DOA1; ubiquitin 99.8 2.6E-16 9E-21 140.7 25.4 194 2-225 78-280 (313)
96 3k26_A Polycomb protein EED; W 99.8 8.2E-18 2.8E-22 153.6 15.8 198 4-229 43-305 (366)
97 4a11_B DNA excision repair pro 99.8 2.1E-16 7.3E-21 146.4 24.7 201 2-229 63-352 (408)
98 2oaj_A Protein SNI1; WD40 repe 99.8 8.5E-17 2.9E-21 167.0 24.4 190 3-222 37-282 (902)
99 2j04_B YDR362CP, TAU91; beta p 99.8 1.8E-17 6.1E-22 162.3 18.2 199 2-224 232-456 (524)
100 1pgu_A Actin interacting prote 99.8 1.2E-16 4.3E-21 156.3 24.2 202 4-229 38-270 (615)
101 3sfz_A APAF-1, apoptotic pepti 99.7 1.4E-17 4.7E-22 177.2 17.5 199 3-229 981-1196(1249)
102 4ggc_A P55CDC, cell division c 99.7 4.1E-16 1.4E-20 139.9 24.5 219 2-230 42-303 (318)
103 1yfq_A Cell cycle arrest prote 99.7 5.3E-17 1.8E-21 147.5 18.7 195 3-229 77-310 (342)
104 3bws_A Protein LP49; two-domai 99.7 5.9E-16 2E-20 145.6 26.4 210 3-229 189-418 (433)
105 3v7d_B Cell division control p 99.7 4.1E-16 1.4E-20 148.4 25.3 197 2-229 139-368 (464)
106 4a11_B DNA excision repair pro 99.7 3.8E-16 1.3E-20 144.6 24.5 177 2-205 119-367 (408)
107 3lrv_A PRE-mRNA-splicing facto 99.7 1.1E-16 3.8E-21 147.1 20.3 195 2-221 92-309 (343)
108 3odt_A Protein DOA1; ubiquitin 99.7 1E-15 3.4E-20 136.9 25.9 195 2-229 36-242 (313)
109 3bg1_A Protein SEC13 homolog; 99.7 1E-16 3.4E-21 146.1 19.0 178 2-202 78-292 (316)
110 1yfq_A Cell cycle arrest prote 99.7 1.4E-16 4.6E-21 144.8 19.5 201 2-229 30-269 (342)
111 2xyi_A Probable histone-bindin 99.7 5.5E-16 1.9E-20 147.1 23.9 184 2-206 201-413 (430)
112 3mmy_A MRNA export factor; mRN 99.7 1.6E-16 5.4E-21 145.0 18.9 165 2-186 61-335 (368)
113 1pgu_A Actin interacting prote 99.7 8.1E-16 2.8E-20 150.5 24.4 202 3-227 86-313 (615)
114 2ojh_A Uncharacterized protein 99.7 2.9E-16 9.8E-21 138.5 19.1 211 4-229 61-289 (297)
115 3vu4_A KMHSV2; beta-propeller 99.7 7.2E-16 2.4E-20 142.9 22.4 195 9-229 3-258 (355)
116 3bws_A Protein LP49; two-domai 99.7 9.8E-16 3.3E-20 144.1 23.4 206 3-229 142-362 (433)
117 2oit_A Nucleoporin 214KDA; NH2 99.7 3.1E-16 1.1E-20 149.9 19.5 139 79-226 89-255 (434)
118 3gre_A Serine/threonine-protei 99.7 1.7E-16 5.9E-21 149.8 17.2 177 2-202 130-358 (437)
119 3gre_A Serine/threonine-protei 99.7 5.2E-16 1.8E-20 146.5 20.2 182 18-222 52-268 (437)
120 2w18_A PALB2, fancn, partner a 99.7 1.4E-15 4.8E-20 140.1 22.4 177 2-201 154-355 (356)
121 4ggc_A P55CDC, cell division c 99.7 4.6E-15 1.6E-19 133.0 25.3 163 21-202 143-314 (318)
122 4gq1_A NUP37; propeller, trans 99.7 3.7E-16 1.3E-20 146.8 16.6 202 3-229 109-377 (393)
123 1xfd_A DIP, dipeptidyl aminope 99.7 6.7E-16 2.3E-20 155.1 19.1 214 3-227 35-321 (723)
124 3v7d_B Cell division control p 99.7 6.6E-15 2.3E-19 140.0 24.3 199 2-230 180-410 (464)
125 3u4y_A Uncharacterized protein 99.7 9.2E-15 3.1E-19 132.5 23.5 201 4-228 19-237 (331)
126 3jro_A Fusion protein of prote 99.7 1.5E-15 5E-20 154.6 19.6 184 25-229 6-225 (753)
127 2oaj_A Protein SNI1; WD40 repe 99.7 2.5E-15 8.6E-20 155.9 21.6 177 27-229 16-229 (902)
128 2ecf_A Dipeptidyl peptidase IV 99.7 1.4E-15 4.8E-20 153.3 19.1 185 29-227 37-301 (741)
129 2z3z_A Dipeptidyl aminopeptida 99.7 3.2E-15 1.1E-19 150.0 20.2 200 5-227 101-371 (706)
130 3vgz_A Uncharacterized protein 99.7 4.9E-14 1.7E-18 128.3 25.6 202 4-228 68-288 (353)
131 3vgz_A Uncharacterized protein 99.7 7.2E-14 2.5E-18 127.2 26.3 203 4-229 110-331 (353)
132 4gq1_A NUP37; propeller, trans 99.6 1.9E-15 6.6E-20 141.9 15.8 176 2-203 163-389 (393)
133 1k32_A Tricorn protease; prote 99.6 6.6E-15 2.3E-19 154.8 21.3 179 30-228 297-488 (1045)
134 3hfq_A Uncharacterized protein 99.6 6.6E-14 2.2E-18 128.1 24.3 206 3-229 61-303 (347)
135 1ri6_A Putative isomerase YBHE 99.6 3.9E-14 1.3E-18 128.1 22.5 205 3-227 13-246 (343)
136 3u4y_A Uncharacterized protein 99.6 2.9E-14 9.8E-19 129.2 21.3 204 4-229 61-290 (331)
137 2ecf_A Dipeptidyl peptidase IV 99.6 6.2E-15 2.1E-19 148.6 18.4 199 5-227 129-395 (741)
138 3pe7_A Oligogalacturonate lyas 99.6 1.7E-14 5.9E-19 133.6 20.0 211 4-227 8-253 (388)
139 1p22_A F-BOX/WD-repeat protein 99.6 4.3E-14 1.5E-18 133.9 22.9 192 2-229 190-401 (435)
140 1pby_B Quinohemoprotein amine 99.6 7.8E-14 2.7E-18 125.8 23.6 200 3-229 9-297 (337)
141 2w18_A PALB2, fancn, partner a 99.6 2E-14 6.8E-19 132.5 19.6 140 82-229 178-344 (356)
142 2ovr_B FBW7, F-BOX/WD repeat p 99.6 1.5E-13 5.2E-18 130.2 26.1 192 3-228 217-424 (445)
143 1xfd_A DIP, dipeptidyl aminope 99.6 1.1E-14 3.6E-19 146.3 18.9 203 4-227 90-375 (723)
144 3o4h_A Acylamino-acid-releasin 99.6 4.4E-15 1.5E-19 146.0 14.9 202 4-227 43-261 (582)
145 2ovr_B FBW7, F-BOX/WD repeat p 99.6 1.8E-13 6.2E-18 129.7 25.5 193 3-229 177-378 (445)
146 3scy_A Hypothetical bacterial 99.6 4.2E-13 1.4E-17 123.5 27.0 173 32-220 158-360 (361)
147 1p22_A F-BOX/WD-repeat protein 99.6 1.8E-13 6.1E-18 129.6 24.3 192 2-229 150-352 (435)
148 1ri6_A Putative isomerase YBHE 99.6 1.5E-13 5.2E-18 124.2 22.7 205 5-229 60-294 (343)
149 2z3z_A Dipeptidyl aminopeptida 99.6 2.4E-13 8.1E-18 136.4 25.0 187 32-227 184-416 (706)
150 4a5s_A Dipeptidyl peptidase 4 99.6 2.6E-14 8.9E-19 145.0 17.7 212 4-227 35-334 (740)
151 1z68_A Fibroblast activation p 99.6 2.2E-15 7.7E-20 151.6 9.7 182 29-228 16-269 (719)
152 1z68_A Fibroblast activation p 99.6 8.3E-15 2.8E-19 147.4 13.7 212 3-227 34-327 (719)
153 3o4h_A Acylamino-acid-releasin 99.6 3.3E-14 1.1E-18 139.8 16.9 195 5-228 88-298 (582)
154 1jmx_B Amine dehydrogenase; ox 99.6 7.3E-13 2.5E-17 120.2 22.8 199 3-229 19-312 (349)
155 3hfq_A Uncharacterized protein 99.5 1E-12 3.6E-17 120.1 23.0 204 4-228 15-256 (347)
156 3scy_A Hypothetical bacterial 99.5 1.3E-12 4.4E-17 120.3 23.7 206 3-229 73-323 (361)
157 4a5s_A Dipeptidyl peptidase 4 99.5 1.7E-13 5.8E-18 139.0 18.8 181 28-226 16-274 (740)
158 1pby_B Quinohemoprotein amine 99.5 5.6E-12 1.9E-16 113.5 25.3 182 4-206 55-314 (337)
159 1k32_A Tricorn protease; prote 99.5 7.3E-13 2.5E-17 139.2 22.0 195 5-226 317-525 (1045)
160 3pe7_A Oligogalacturonate lyas 99.5 4.3E-13 1.5E-17 124.1 17.2 182 5-201 168-380 (388)
161 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.9E-12 6.6E-17 119.9 21.5 211 6-229 61-327 (365)
162 2oit_A Nucleoporin 214KDA; NH2 99.5 5.8E-13 2E-17 127.1 18.1 160 29-202 93-277 (434)
163 3c5m_A Oligogalacturonate lyas 99.5 2.5E-13 8.6E-18 125.6 13.7 200 18-228 20-254 (396)
164 3azo_A Aminopeptidase; POP fam 99.5 9.2E-13 3.1E-17 131.1 18.2 179 3-201 45-272 (662)
165 1nir_A Nitrite reductase; hemo 99.5 9.5E-12 3.2E-16 122.1 24.0 179 4-207 158-360 (543)
166 1jmx_B Amine dehydrogenase; ox 99.4 2.3E-11 7.9E-16 110.2 23.2 184 3-206 63-329 (349)
167 3azo_A Aminopeptidase; POP fam 99.4 8.8E-12 3E-16 124.0 21.6 184 29-225 130-348 (662)
168 1nir_A Nitrite reductase; hemo 99.4 2.2E-11 7.5E-16 119.5 22.5 203 4-229 199-438 (543)
169 1jof_A Carboxy-CIS,CIS-muconat 99.4 1.4E-11 4.9E-16 114.0 20.1 185 3-206 117-344 (365)
170 2gop_A Trilobed protease; beta 99.4 2.4E-11 8.1E-16 110.7 21.0 199 5-228 43-278 (347)
171 3c5m_A Oligogalacturonate lyas 99.4 4.7E-12 1.6E-16 116.9 15.5 166 61-228 167-367 (396)
172 2gop_A Trilobed protease; beta 99.4 3.7E-11 1.3E-15 109.4 20.1 180 32-227 18-230 (347)
173 2xdw_A Prolyl endopeptidase; a 99.3 4.1E-10 1.4E-14 113.4 22.4 189 31-229 127-353 (710)
174 2xdw_A Prolyl endopeptidase; a 99.3 1.5E-10 5.2E-15 116.6 19.1 182 37-227 80-301 (710)
175 2bkl_A Prolyl endopeptidase; m 99.3 1.7E-10 5.9E-15 116.0 19.0 179 36-224 75-283 (695)
176 2oiz_A Aromatic amine dehydrog 99.2 6E-09 2E-13 96.7 26.7 206 4-224 30-360 (361)
177 1q7f_A NHL, brain tumor CG1071 99.2 3.8E-08 1.3E-12 87.1 26.6 155 62-228 100-267 (286)
178 2dg1_A DRP35, lactonase; beta 99.2 1.4E-08 4.8E-13 91.9 24.1 204 5-227 66-295 (333)
179 1q7f_A NHL, brain tumor CG1071 99.1 1.4E-08 4.6E-13 90.0 21.8 170 4-202 99-279 (286)
180 1yr2_A Prolyl oligopeptidase; 99.1 3.3E-09 1.1E-13 107.5 18.2 182 36-227 114-331 (741)
181 2bkl_A Prolyl endopeptidase; m 99.1 1.5E-08 5.2E-13 101.7 22.1 161 30-202 122-303 (695)
182 3no2_A Uncharacterized protein 99.1 5E-08 1.7E-12 87.1 23.0 179 3-209 13-202 (276)
183 3e5z_A Putative gluconolactona 99.0 3.6E-08 1.2E-12 87.9 21.2 196 5-229 50-274 (296)
184 3fvz_A Peptidyl-glycine alpha- 99.0 3.1E-08 1.1E-12 90.2 21.1 203 5-227 69-306 (329)
185 2dg1_A DRP35, lactonase; beta 99.0 4.7E-08 1.6E-12 88.4 21.1 177 31-224 47-245 (333)
186 3iuj_A Prolyl endopeptidase; h 99.0 5.1E-08 1.7E-12 98.1 21.7 208 5-227 155-386 (693)
187 1yr2_A Prolyl oligopeptidase; 99.0 1.4E-07 4.6E-12 95.6 24.0 207 5-227 189-422 (741)
188 2ghs_A AGR_C_1268P; regucalcin 98.9 4.1E-07 1.4E-11 82.8 24.9 175 29-227 90-287 (326)
189 3e5z_A Putative gluconolactona 98.9 1.6E-07 5.5E-12 83.6 21.4 173 30-224 29-230 (296)
190 3g4e_A Regucalcin; six bladed 98.9 5.9E-07 2E-11 80.4 24.6 179 28-228 53-258 (297)
191 1qks_A Cytochrome CD1 nitrite 98.9 5.1E-07 1.7E-11 88.9 25.9 177 4-206 176-377 (567)
192 1xip_A Nucleoporin NUP159; bet 98.9 4.3E-08 1.5E-12 91.9 16.5 127 81-228 87-230 (388)
193 1rwi_B Serine/threonine-protei 98.9 6.5E-07 2.2E-11 78.0 22.8 173 30-227 68-248 (270)
194 3dsm_A Uncharacterized protein 98.9 5E-07 1.7E-11 82.3 22.4 199 4-229 63-284 (328)
195 3fvz_A Peptidyl-glycine alpha- 98.9 7.6E-07 2.6E-11 80.9 23.0 181 29-221 24-250 (329)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 6.6E-07 2.2E-11 79.7 21.9 178 29-227 71-283 (314)
197 3iuj_A Prolyl endopeptidase; h 98.8 1.2E-07 4.2E-12 95.3 18.0 182 32-227 132-341 (693)
198 1qks_A Cytochrome CD1 nitrite 98.8 1.1E-06 3.7E-11 86.6 22.4 177 33-229 158-359 (567)
199 2mad_H Methylamine dehydrogena 98.7 4.8E-06 1.7E-10 77.5 25.2 74 129-207 272-355 (373)
200 3hrp_A Uncharacterized protein 98.7 2.9E-06 9.8E-11 80.0 23.5 176 5-206 152-358 (409)
201 1rwi_B Serine/threonine-protei 98.7 1.2E-06 4.2E-11 76.2 19.4 153 30-205 109-266 (270)
202 1xip_A Nucleoporin NUP159; bet 98.7 3.1E-07 1.1E-11 86.1 15.7 157 3-186 56-233 (388)
203 3dr2_A Exported gluconolactona 98.7 8.6E-07 2.9E-11 79.6 18.0 181 28-228 85-293 (305)
204 2oiz_A Aromatic amine dehydrog 98.7 3.2E-06 1.1E-10 78.1 22.3 87 88-179 259-360 (361)
205 3dsm_A Uncharacterized protein 98.7 2.4E-06 8E-11 77.8 21.1 184 4-211 104-310 (328)
206 3g4e_A Regucalcin; six bladed 98.7 3.9E-06 1.3E-10 75.0 21.0 148 32-186 101-261 (297)
207 3c75_H MADH, methylamine dehyd 98.7 3E-06 1E-10 80.4 21.0 192 5-208 99-408 (426)
208 3dr2_A Exported gluconolactona 98.6 4.4E-06 1.5E-10 74.9 20.6 158 31-204 47-225 (305)
209 2ghs_A AGR_C_1268P; regucalcin 98.6 3E-06 1E-10 77.0 19.0 146 33-202 53-209 (326)
210 3no2_A Uncharacterized protein 98.6 1.2E-05 4.1E-10 71.5 21.8 159 7-185 58-231 (276)
211 2ece_A 462AA long hypothetical 98.5 2.8E-05 9.5E-10 73.8 23.1 213 4-229 105-398 (462)
212 2z2n_A Virginiamycin B lyase; 98.5 0.00013 4.5E-09 63.8 25.7 149 63-224 79-237 (299)
213 3hrp_A Uncharacterized protein 98.5 1.9E-05 6.4E-10 74.4 21.3 172 31-224 133-335 (409)
214 2z2n_A Virginiamycin B lyase; 98.5 0.00015 5.3E-09 63.3 25.8 147 63-224 121-278 (299)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 9.7E-06 3.3E-10 72.0 17.8 130 62-202 153-298 (314)
216 2xe4_A Oligopeptidase B; hydro 98.5 3E-06 1E-10 86.1 15.9 144 32-186 177-338 (751)
217 1npe_A Nidogen, entactin; glyc 98.4 0.00029 9.9E-09 61.5 26.0 174 30-223 80-262 (267)
218 1npe_A Nidogen, entactin; glyc 98.4 0.0001 3.5E-09 64.4 22.3 159 31-206 38-201 (267)
219 1fwx_A Nitrous oxide reductase 98.3 3.8E-05 1.3E-09 75.2 19.2 203 5-223 175-455 (595)
220 1mda_H Methylamine dehydrogena 98.3 5.4E-05 1.9E-09 70.3 18.6 111 91-208 219-352 (368)
221 2qc5_A Streptogramin B lactona 98.3 0.00089 3E-08 58.4 25.3 149 63-224 84-242 (300)
222 1fwx_A Nitrous oxide reductase 98.2 0.00016 5.6E-09 70.7 21.9 161 63-229 113-347 (595)
223 2mad_H Methylamine dehydrogena 98.2 4.2E-05 1.4E-09 71.1 16.8 113 89-206 27-159 (373)
224 2qc5_A Streptogramin B lactona 98.2 0.00085 2.9E-08 58.5 24.5 148 63-223 126-283 (300)
225 2xe4_A Oligopeptidase B; hydro 98.2 0.00022 7.4E-09 72.3 23.2 168 6-186 202-386 (751)
226 3sjl_D Methylamine dehydrogena 98.2 2.7E-05 9.3E-10 72.7 14.0 119 87-211 37-178 (386)
227 2ece_A 462AA long hypothetical 98.1 0.00018 6.2E-09 68.2 19.2 166 61-228 42-269 (462)
228 3sjl_D Methylamine dehydrogena 98.1 0.00011 3.7E-09 68.7 16.6 122 35-167 39-179 (386)
229 2qe8_A Uncharacterized protein 98.1 0.00041 1.4E-08 63.1 19.5 149 28-186 16-214 (343)
230 2iwa_A Glutamine cyclotransfer 98.1 0.0003 1E-08 62.3 17.9 176 31-230 23-224 (266)
231 3s25_A Hypothetical 7-bladed b 98.0 0.0004 1.4E-08 62.6 18.3 197 8-227 38-238 (302)
232 3v64_C Agrin; beta propeller, 98.0 0.0023 7.7E-08 58.6 22.7 157 31-205 75-236 (349)
233 3v65_B Low-density lipoprotein 97.9 0.0015 5.1E-08 60.7 21.4 158 30-205 117-279 (386)
234 1ijq_A LDL receptor, low-densi 97.9 0.0052 1.8E-07 55.3 24.4 178 5-204 10-196 (316)
235 2qe8_A Uncharacterized protein 97.9 0.0017 5.8E-08 58.9 20.6 99 84-186 196-310 (343)
236 2fp8_A Strictosidine synthase; 97.9 0.0016 5.4E-08 58.4 20.0 113 84-203 81-216 (322)
237 3nol_A Glutamine cyclotransfer 97.9 0.0012 4.1E-08 58.1 18.2 157 60-230 63-243 (262)
238 3tc9_A Hypothetical hydrolase; 97.9 0.0015 5E-08 61.8 20.3 152 32-203 140-301 (430)
239 3c75_H MADH, methylamine dehyd 97.8 0.00024 8.1E-09 67.3 13.1 114 91-210 81-217 (426)
240 3p5b_L Low density lipoprotein 97.7 0.018 6.3E-07 53.6 24.7 158 30-205 113-279 (400)
241 2iwa_A Glutamine cyclotransfer 97.7 0.0051 1.8E-07 54.3 19.4 157 4-185 43-224 (266)
242 3qqz_A Putative uncharacterize 97.6 0.016 5.5E-07 50.8 21.6 177 29-224 27-236 (255)
243 3s25_A Hypothetical 7-bladed b 97.6 0.0022 7.5E-08 57.8 16.1 150 34-206 109-258 (302)
244 3sov_A LRP-6, low-density lipo 97.6 0.013 4.4E-07 52.9 21.4 157 30-204 36-198 (318)
245 3mbr_X Glutamine cyclotransfer 97.6 0.0045 1.6E-07 53.8 16.8 157 60-230 41-222 (243)
246 2p4o_A Hypothetical protein; p 97.6 0.016 5.5E-07 51.5 21.0 149 31-203 34-198 (306)
247 3nok_A Glutaminyl cyclase; bet 97.5 0.011 3.9E-07 52.0 19.2 162 2-189 72-258 (268)
248 1ijq_A LDL receptor, low-densi 97.5 0.027 9.2E-07 50.5 22.2 156 64-227 12-179 (316)
249 3v65_B Low-density lipoprotein 97.5 0.026 8.8E-07 52.3 22.3 135 63-206 182-322 (386)
250 3tc9_A Hypothetical hydrolase; 97.5 0.031 1.1E-06 52.6 22.9 138 5-156 159-300 (430)
251 3nol_A Glutamine cyclotransfer 97.5 0.013 4.3E-07 51.5 18.6 156 5-185 65-243 (262)
252 3v64_C Agrin; beta propeller, 97.5 0.062 2.1E-06 48.9 25.1 136 62-206 138-279 (349)
253 2fp8_A Strictosidine synthase; 97.4 0.011 3.7E-07 52.9 18.4 119 84-207 127-273 (322)
254 2p4o_A Hypothetical protein; p 97.4 0.057 2E-06 47.8 23.4 132 85-228 119-274 (306)
255 1mda_H Methylamine dehydrogena 97.4 0.00055 1.9E-08 63.5 9.4 90 107-202 47-157 (368)
256 1kb0_A Quinohemoprotein alcoho 97.3 0.018 6E-07 57.6 20.3 57 148-210 457-515 (677)
257 3qqz_A Putative uncharacterize 97.3 0.0078 2.7E-07 52.8 14.7 135 83-227 27-188 (255)
258 1n7d_A LDL receptor, low-densi 97.3 0.0021 7.2E-08 64.6 12.5 157 30-204 407-572 (699)
259 3m0c_C LDL receptor, low-densi 97.3 0.097 3.3E-06 53.2 24.7 136 63-205 447-591 (791)
260 3kya_A Putative phosphatase; s 97.2 0.011 3.8E-07 56.8 16.4 155 31-203 141-341 (496)
261 3nok_A Glutaminyl cyclase; bet 97.1 0.013 4.6E-07 51.5 14.8 152 64-230 77-253 (268)
262 4hw6_A Hypothetical protein, I 97.1 0.045 1.5E-06 51.6 19.4 151 31-202 141-303 (433)
263 2hz6_A Endoplasmic reticulum t 97.1 0.00016 5.5E-09 66.8 2.0 176 4-210 18-200 (369)
264 3p5b_L Low density lipoprotein 97.1 0.1 3.5E-06 48.4 21.2 158 62-227 92-261 (400)
265 4hw6_A Hypothetical protein, I 97.1 0.14 4.6E-06 48.2 22.2 160 30-206 183-377 (433)
266 3mbr_X Glutamine cyclotransfer 97.0 0.11 3.6E-06 45.1 19.6 156 5-185 43-222 (243)
267 4a0p_A LRP6, LRP-6, low-densit 97.0 0.24 8.4E-06 48.9 24.1 157 30-204 38-198 (628)
268 3hxj_A Pyrrolo-quinoline quino 96.9 0.048 1.6E-06 48.0 17.1 127 63-207 118-248 (330)
269 3a9g_A Putative uncharacterize 96.8 0.017 5.8E-07 52.9 13.4 143 84-229 30-214 (354)
270 3amr_A 3-phytase; beta-propell 96.8 0.29 1E-05 44.7 21.7 182 5-203 50-263 (355)
271 3sre_A PON1, serum paraoxonase 96.8 0.17 5.9E-06 46.3 19.9 133 63-202 84-251 (355)
272 2hz6_A Endoplasmic reticulum t 96.8 0.00029 1E-08 65.1 1.2 128 63-206 20-153 (369)
273 3a9g_A Putative uncharacterize 96.8 0.068 2.3E-06 48.9 16.9 142 30-185 30-216 (354)
274 3s94_A LRP-6, low-density lipo 96.7 0.29 9.8E-06 48.3 22.2 158 30-205 41-204 (619)
275 1yiq_A Quinohemoprotein alcoho 96.6 0.28 9.7E-06 48.9 21.7 72 147-224 454-530 (689)
276 2ism_A Putative oxidoreductase 96.6 0.048 1.6E-06 49.8 14.6 142 84-229 32-219 (352)
277 3sov_A LRP-6, low-density lipo 96.5 0.42 1.5E-05 42.8 22.8 136 62-206 101-242 (318)
278 3hxj_A Pyrrolo-quinoline quino 96.5 0.27 9.4E-06 43.0 18.7 137 54-208 147-289 (330)
279 2p9w_A MAL S 1 allergenic prot 96.5 0.3 1E-05 44.3 18.7 151 33-202 17-214 (334)
280 3m0c_C LDL receptor, low-densi 96.4 0.98 3.3E-05 45.9 24.5 136 62-206 493-636 (791)
281 2ism_A Putative oxidoreductase 96.4 0.15 5.2E-06 46.4 16.7 142 30-185 32-221 (352)
282 2g8s_A Glucose/sorbosone dehyd 96.3 0.11 3.9E-06 47.3 15.5 144 30-185 19-216 (353)
283 3das_A Putative oxidoreductase 96.3 0.33 1.1E-05 44.3 18.3 144 30-185 33-220 (347)
284 2xbg_A YCF48-like protein; pho 96.2 0.64 2.2E-05 41.5 20.6 146 64-223 144-304 (327)
285 1cru_A Protein (soluble quinop 96.2 0.23 8E-06 47.0 17.2 144 30-185 28-246 (454)
286 1kb0_A Quinohemoprotein alcoho 96.2 0.37 1.3E-05 48.0 19.3 77 106-185 457-538 (677)
287 2p9w_A MAL S 1 allergenic prot 96.1 0.73 2.5E-05 41.7 20.7 121 32-158 66-216 (334)
288 4a0p_A LRP6, LRP-6, low-densit 96.0 0.84 2.9E-05 45.0 20.9 138 63-206 363-511 (628)
289 3s94_A LRP-6, low-density lipo 96.0 1.1 3.6E-05 44.2 21.5 136 63-205 372-512 (619)
290 2g8s_A Glucose/sorbosone dehyd 95.9 0.12 4.1E-06 47.1 13.5 143 84-229 19-214 (353)
291 1yiq_A Quinohemoprotein alcoho 95.8 0.6 2.1E-05 46.5 19.2 77 106-185 455-536 (689)
292 3das_A Putative oxidoreductase 95.5 0.58 2E-05 42.7 16.2 143 83-229 32-218 (347)
293 3kya_A Putative phosphatase; s 95.5 0.12 4E-06 49.7 11.8 136 84-227 140-325 (496)
294 1n7d_A LDL receptor, low-densi 95.4 0.075 2.6E-06 53.3 10.7 136 62-206 475-618 (699)
295 2xzh_A Clathrin heavy chain 1; 95.4 1.5 5.2E-05 39.8 23.1 183 5-211 87-299 (365)
296 2xbg_A YCF48-like protein; pho 95.4 0.94 3.2E-05 40.4 17.1 103 75-185 197-311 (327)
297 1kv9_A Type II quinohemoprotei 95.0 3.2 0.00011 41.1 21.4 57 147-209 437-495 (668)
298 3pbp_A Nucleoporin NUP82; beta 94.9 1.1 3.9E-05 42.0 16.2 69 83-157 66-158 (452)
299 2ad6_A Methanol dehydrogenase 94.8 1.2 4.2E-05 43.2 17.2 78 105-185 443-525 (571)
300 1bpo_A Protein (clathrin); cla 94.8 2.7 9.3E-05 39.6 24.2 183 5-211 86-298 (494)
301 1cru_A Protein (soluble quinop 94.7 0.93 3.2E-05 42.8 15.5 100 84-186 28-163 (454)
302 3pbp_A Nucleoporin NUP82; beta 94.5 0.36 1.2E-05 45.3 11.8 95 30-140 67-196 (452)
303 4a2l_A BT_4663, two-component 94.4 4.6 0.00016 40.4 22.1 136 52-202 365-525 (795)
304 2ad6_A Methanol dehydrogenase 93.7 5.4 0.00018 38.6 20.3 57 147-209 443-501 (571)
305 1k3i_A Galactose oxidase precu 93.4 0.66 2.2E-05 45.7 12.1 115 86-203 189-323 (656)
306 2wg3_C Hedgehog-interacting pr 93.2 5.8 0.0002 37.4 18.7 144 30-185 15-240 (463)
307 3sbq_A Nitrous-oxide reductase 93.1 1.5 5.1E-05 42.6 13.4 119 83-206 323-481 (638)
308 1k3i_A Galactose oxidase precu 92.9 2.2 7.5E-05 41.9 15.0 96 63-159 220-325 (656)
309 3sre_A PON1, serum paraoxonase 92.6 6 0.0002 36.0 20.5 121 61-185 140-285 (355)
310 1kv9_A Type II quinohemoprotei 91.9 9.1 0.00031 37.7 18.1 75 106-183 438-517 (668)
311 3v9f_A Two-component system se 91.8 7.1 0.00024 38.9 17.5 138 52-204 371-525 (781)
312 4a2l_A BT_4663, two-component 91.6 12 0.00041 37.4 23.3 108 82-203 356-480 (795)
313 2wg3_C Hedgehog-interacting pr 90.9 9.7 0.00033 35.9 16.4 100 85-186 16-158 (463)
314 3q7m_A Lipoprotein YFGL, BAMB; 90.0 9.9 0.00034 33.7 20.5 100 95-207 189-301 (376)
315 3q7m_A Lipoprotein YFGL, BAMB; 89.3 11 0.00038 33.4 19.5 64 95-165 144-215 (376)
316 3amr_A 3-phytase; beta-propell 88.7 14 0.00047 33.6 19.7 126 63-200 51-207 (355)
317 1tl2_A L10, protein (tachylect 88.1 3 0.0001 35.5 9.3 93 83-184 41-152 (236)
318 1flg_A Protein (quinoprotein e 87.3 3.2 0.00011 40.4 10.4 78 105-185 465-547 (582)
319 1xi4_A Clathrin heavy chain; a 87.3 15 0.00051 39.8 15.8 181 5-209 86-296 (1630)
320 3v9f_A Two-component system se 87.2 25 0.00085 34.9 18.7 136 54-204 127-288 (781)
321 1flg_A Protein (quinoprotein e 85.2 8.2 0.00028 37.4 12.1 57 147-209 465-523 (582)
322 1w6s_A Methanol dehydrogenase 84.4 31 0.0011 33.5 18.6 77 106-185 453-534 (599)
323 2xzh_A Clathrin heavy chain 1; 81.6 30 0.001 31.3 20.9 172 2-201 46-234 (365)
324 4asc_A Kelch repeat and BTB do 81.3 26 0.00088 30.3 14.0 96 108-203 69-174 (315)
325 3zwu_A Alkaline phosphatase PH 80.7 5.4 0.00018 39.0 8.7 58 129-186 481-550 (592)
326 4hvt_A Ritya.17583.B, post-pro 80.6 48 0.0016 32.9 18.1 185 2-202 213-429 (711)
327 3ii7_A Kelch-like protein 7; p 80.5 21 0.00071 30.6 11.9 110 94-203 11-127 (306)
328 3sbq_A Nitrous-oxide reductase 80.4 3.6 0.00012 39.9 7.1 67 128-202 327-407 (638)
329 3ii7_A Kelch-like protein 7; p 80.0 28 0.00094 29.8 13.7 97 106-203 118-225 (306)
330 2vpj_A Kelch-like protein 12; 80.0 27 0.00093 29.7 13.9 96 106-202 175-277 (301)
331 2woz_A Kelch repeat and BTB do 79.0 31 0.0011 29.8 13.4 96 108-203 80-184 (318)
332 1w6s_A Methanol dehydrogenase 75.0 63 0.0022 31.3 20.5 57 147-209 452-510 (599)
333 2zwa_A Leucine carboxyl methyl 73.3 70 0.0024 31.4 14.7 97 107-204 469-578 (695)
334 2uvk_A YJHT; unknown function, 73.2 36 0.0012 29.8 11.5 101 106-206 217-345 (357)
335 4gq2_M Nucleoporin NUP120; bet 71.2 20 0.00067 37.0 10.3 38 125-165 237-274 (950)
336 4a9v_A PHOX; hydrolase, beta-p 70.9 20 0.00068 34.8 9.5 62 127-188 479-552 (592)
337 4asc_A Kelch repeat and BTB do 67.4 59 0.002 27.8 15.0 96 107-203 118-221 (315)
338 2vpj_A Kelch-like protein 12; 66.4 59 0.002 27.5 14.3 97 107-204 79-185 (301)
339 1bpo_A Protein (clathrin); cla 63.5 1E+02 0.0034 29.1 18.6 172 2-201 45-233 (494)
340 3q6k_A 43.2 kDa salivary prote 63.3 89 0.0031 28.4 14.5 102 82-185 86-242 (381)
341 2uvk_A YJHT; unknown function, 61.5 45 0.0015 29.1 9.7 93 94-186 19-127 (357)
342 1tl2_A L10, protein (tachylect 60.7 37 0.0013 28.8 8.2 87 124-223 41-146 (236)
343 1zgk_A Kelch-like ECH-associat 58.2 87 0.003 26.7 15.7 95 107-204 138-241 (308)
344 1xi4_A Clathrin heavy chain; a 49.8 2.2E+02 0.0074 31.1 13.4 172 2-201 45-233 (1630)
345 4a9v_A PHOX; hydrolase, beta-p 49.3 62 0.0021 31.4 8.7 60 83-142 476-549 (592)
346 3zwu_A Alkaline phosphatase PH 49.1 51 0.0017 32.0 8.2 57 86-142 479-549 (592)
347 1zgk_A Kelch-like ECH-associat 48.3 1.3E+02 0.0043 25.6 13.7 52 106-159 184-242 (308)
348 2xn4_A Kelch-like protein 2; s 43.7 1.4E+02 0.005 25.0 16.5 97 107-204 125-230 (302)
349 2zwa_A Leucine carboxyl methyl 40.8 1.6E+02 0.0056 28.8 10.7 94 106-203 412-522 (695)
350 3ei3_A DNA damage-binding prot 40.7 3.5E+02 0.012 28.5 21.4 107 81-202 884-998 (1158)
351 2woz_A Kelch repeat and BTB do 40.1 1.7E+02 0.0059 24.8 17.4 96 107-203 128-231 (318)
352 4fhn_B Nucleoporin NUP120; pro 40.1 29 0.001 36.5 5.2 37 126-165 240-276 (1139)
353 3ei3_A DNA damage-binding prot 36.5 4E+02 0.014 28.0 20.1 173 5-186 715-944 (1158)
354 2xn4_A Kelch-like protein 2; s 35.0 2E+02 0.0068 24.0 17.5 80 106-185 173-259 (302)
355 4gq2_M Nucleoporin NUP120; bet 27.3 3.1E+02 0.011 28.0 10.4 35 84-120 237-272 (950)
356 3f7f_A Nucleoporin NUP120; nuc 25.1 1.1E+02 0.0039 30.4 6.3 32 132-166 228-259 (729)
357 3gbl_A BETA2-microglobulin; im 22.3 1.6E+02 0.0056 20.4 5.2 40 4-43 4-46 (97)
358 4hvt_A Ritya.17583.B, post-pro 22.2 5E+02 0.017 25.5 10.4 72 32-114 353-429 (711)
359 3kxs_F Capsid protein; core pr 20.8 33 0.0011 25.8 1.1 10 266-275 128-137 (143)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=6.4e-24 Score=194.74 Aligned_cols=202 Identities=14% Similarity=0.249 Sum_probs=163.6
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ ++.+............+.|+|+|++|++... .| .+.+++............+
T Consensus 99 s~D~~i~lWd~~~---~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~----------dg--~v~i~~~~~~~~~~~~~~~ 163 (321)
T 3ow8_A 99 SLDAHIRLWDLEN---GKQIKSIDAGPVDAWTLAFSPDSQYLATGTH----------VG--KVNIFGVESGKKEYSLDTR 163 (321)
T ss_dssp ETTSEEEEEETTT---TEEEEEEECCTTCCCCEEECTTSSEEEEECT----------TS--EEEEEETTTCSEEEEEECS
T ss_pred eCCCcEEEEECCC---CCEEEEEeCCCccEEEEEECCCCCEEEEEcC----------CC--cEEEEEcCCCceeEEecCC
Confidence 3578999999998 7778777777778889999999999877421 12 2455565544333333346
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
...|.+++|+|+|++|++ +..++.|.+||++. +.+..+ |...+.++.|+|+|++|++++ .|+.|++||++++
T Consensus 164 ~~~v~~~~~spdg~~las--g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s---~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLAS--GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS---DDGYIKIYDVQHA 238 (321)
T ss_dssp SSCEEEEEECTTSSEEEE--EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC---TTSCEEEEETTTC
T ss_pred CceEEEEEECCCCCEEEE--EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc---CCCeEEEEECCCc
Confidence 778999999999999988 46789999999964 455666 678899999999999999998 8999999999999
Q ss_pred eEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCCCCCC
Q 020756 159 KQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 159 ~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+++..+..| .+..++|+|||++|++++. |+.++|||+. ++++ +..|...++.+.|+|+...+++.
T Consensus 239 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~------D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 239 NLAGTLSGHASWVLNVAFCPDDTHFVSSSS------DKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ceeEEEcCCCCceEEEEECCCCCEEEEEeC------CCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 988888876 6889999999999999995 9999999995 4555 34577899999999998877765
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.91 E-value=1.9e-22 Score=187.19 Aligned_cols=200 Identities=12% Similarity=0.179 Sum_probs=151.3
Q ss_pred CCceEEEEEcCCcCCCCceeeeec----ccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee
Q 020756 3 SPASVQIYACGKDLQSQPLARRSF----FRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP 78 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~----f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~ 78 (321)
..+.|+||++.+ ++.+....+ +...+..+.|+|+|++|+... . | | .+.++++.........
T Consensus 101 ~dg~v~lWd~~~---~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs-~--d-------~--~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 101 DSGAVELWELDE---NETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS-K--D-------I--CIKVWDLAQQVVLSSY 165 (344)
T ss_dssp TTSEEEEEEECT---TSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-T--T-------S--CEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeccC---CCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-C--C-------C--eEEEEECCCCcEEEEE
Confidence 468999999998 565544332 356778999999999987642 1 1 2 2566666655333344
Q ss_pred cCCCCCeEEEEECcCCCE-EEEEEccCCCeEEEEeCCC-ceeEEe----CCcCeeeEEEcCCC-CeEEEEccCCCCCcEE
Q 020756 79 LRKEGPVHDVQWSYSGSE-FAVVYGFMPASATIFNKKC-RPILEL----GSGPYNTVRWNPKG-KFLCLAGFGNLPGDMA 151 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~-l~~~~g~~~~~i~i~d~~~-~~~~~~----~~~~~~~~~~sPdG-~~l~~~g~~n~~g~i~ 151 (321)
..|.+.|.+++|+|++.. |++ +..|+.|+|||++. +.+..+ +...+.++.|+|++ ++|++++ .|+.|+
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s--~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~---~dg~v~ 240 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLS--CSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD---ENGTVS 240 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEE--EETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE---TTSEEE
T ss_pred cCcCCceEEEEecCCCCCceee--eccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec---cCCcEE
Confidence 458999999999999975 455 46789999999964 455554 34568899999965 5677777 889999
Q ss_pred EEECCCCeEEEeeeCC--CeeeEEEccCC-CEEEEEEcCCceeecCcEEEEeecCcee--EEeccCceEEEEEecCCCCC
Q 020756 152 FWDYVDGKQLGTTRAE--CSVTSEWSPDG-RYFMTATTAPRLQIDNGIKIFHHNGSLF--FKKMFDKLFQAEWKPVSPDK 226 (321)
Q Consensus 152 iwD~~~~~~i~~~~~~--~~~~~~wSpdG-~~l~t~~s~~rl~~d~~v~iw~~~g~~l--~~~~~~~~~~~~w~P~~~~~ 226 (321)
|||+++++++..+..| .++.++||||| ++|++++. |+.|+|||+....+ ...|...|+.++|+|+...+
T Consensus 241 ~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~------D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSE------DCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSL 314 (344)
T ss_dssp EEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEET------TSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeE
Confidence 9999999999888877 78999999998 57888884 99999999965544 45678899999999999887
Q ss_pred CC
Q 020756 227 FG 228 (321)
Q Consensus 227 ~~ 228 (321)
+.
T Consensus 315 la 316 (344)
T 4gqb_B 315 LT 316 (344)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.89 E-value=5e-21 Score=176.30 Aligned_cols=214 Identities=10% Similarity=0.090 Sum_probs=162.2
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEe------cccC--------------C-------
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQS------DVDK--------------T------- 54 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~------d~d~--------------t------- 54 (321)
+.++.|+||++.+ ++.+............+.|+|+|++|+..... +... .
T Consensus 74 s~Dg~v~iWd~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~ 150 (340)
T 1got_B 74 SQDGKLIIWDSYT---TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150 (340)
T ss_dssp ETTTEEEEEETTT---CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEE
T ss_pred eCCCcEEEEECCC---CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEE
Confidence 4678999999988 67777777777788899999999988764210 0000 0
Q ss_pred ----Ccee--ecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcC
Q 020756 55 ----NQSY--YGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGP 125 (321)
Q Consensus 55 ----~~s~--~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~ 125 (321)
+... .+...+.+++............|.+.|.+++|+|+++.|++ +..|+.|++||++. ..+..+ |...
T Consensus 151 ~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--g~~d~~v~~wd~~~~~~~~~~~~h~~~ 228 (340)
T 1got_B 151 FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS--GACDASAKLWDVREGMCRQTFTGHESD 228 (340)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTCSEEEEECCCSSC
T ss_pred ECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE--EeCCCcEEEEECCCCeeEEEEcCCcCC
Confidence 0000 01123444454443222223358899999999999998887 46789999999954 455566 7889
Q ss_pred eeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC----CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee
Q 020756 126 YNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE----CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 126 ~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~----~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
++++.|+|+|++|++++ .|+.|++||+++++.+..+... .++.++|+|+|++|++++. |+.++|||+
T Consensus 229 v~~v~~~p~~~~l~s~s---~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~------d~~i~vwd~ 299 (340)
T 1got_B 229 INAICFFPNGNAFATGS---DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD------DFNCNVWDA 299 (340)
T ss_dssp EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET------TSEEEEEET
T ss_pred EEEEEEcCCCCEEEEEc---CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC------CCeEEEEEc
Confidence 99999999999999999 8999999999999887776543 5788999999999999995 999999998
Q ss_pred c-Ccee--EEeccCceEEEEEecCCCCCCCC
Q 020756 202 N-GSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 202 ~-g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
. +..+ +..|...+..+.|+|++..+++.
T Consensus 300 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 330 (340)
T 1got_B 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred ccCcEeeEeecCCCcEEEEEEcCCCCEEEEE
Confidence 4 4544 55688899999999998877764
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.89 E-value=2.6e-21 Score=189.06 Aligned_cols=198 Identities=16% Similarity=0.272 Sum_probs=162.9
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||+. + ++.+............+.|+|+|++|+.... ...+.+++..+.. ......|.
T Consensus 364 ~dg~v~~~~~-~---~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~------------d~~v~~~~~~~~~-~~~~~~~~ 426 (577)
T 2ymu_A 364 DDKTVKLWNR-N---GQLLQTLTGHSSSVRGVAFSPDGQTIASASD------------DKTVKLWNRNGQL-LQTLTGHS 426 (577)
T ss_dssp TTSEEEEEET-T---CCEEEEEECCSSCEEEEEECTTSSCEEEEET------------TSEEEEECTTCCE-EEEEECCS
T ss_pred CCCEEEEEcC-C---CCEEEEecCCCCCeEEEEECCCCCEEEEEeC------------CCEEEEEeCCCCE-EEEecCCC
Confidence 4678999995 3 4667777767778889999999999876421 1125555655542 22334688
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeE
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQ 160 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~ 160 (321)
..|.+++|+||++.|+++ ..++.+.+||..++.+..+ |...+.+++|+|+|++|++++ .++.|++||. ++++
T Consensus 427 ~~v~~~~~s~d~~~l~~~--~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~---~d~~i~iw~~-~~~~ 500 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASA--SDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS---DDKTVKLWNR-NGQL 500 (577)
T ss_dssp SCEEEEEECTTSSEEEEE--ETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEE---TTSEEEEEET-TSCE
T ss_pred CCeEEEEECCCCCEEEEE--cCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe---CCCEEEEEcC-CCCE
Confidence 999999999999999885 5688999999988877776 788999999999999999999 8999999996 6778
Q ss_pred EEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee--EEeccCceEEEEEecCCCCCCCC
Q 020756 161 LGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 161 i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+..+..| .++.++|||||++|++++. |+.|+|||++|+++ +..|...|..+.|+|++..+++.
T Consensus 501 ~~~~~~h~~~v~~l~~s~dg~~l~s~~~------dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 501 LQTLTGHSSSVRGVAFSPDGQTIASASD------DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEET------TSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred EEEEeCCCCCEEEEEEcCCCCEEEEEEC------cCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 8888876 7899999999999999994 99999999999887 55688899999999999888764
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.89 E-value=6.9e-21 Score=180.16 Aligned_cols=203 Identities=10% Similarity=0.120 Sum_probs=162.5
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ ++.+.....+...+..+.|+|+|++|+... . | |. +.+++..+.........|
T Consensus 127 s~Dg~i~vwd~~~---~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs-~--D-------~~--i~iwd~~~~~~~~~~~~h 191 (410)
T 1vyh_C 127 SEDATIKVWDYET---GDFERTLKGHTDSVQDISFDHSGKLLASCS-A--D-------MT--IKLWDFQGFECIRTMHGH 191 (410)
T ss_dssp ESSSCEEEEETTT---CCCCEEECCCSSCEEEEEECTTSSEEEEEE-T--T-------SC--CCEEETTSSCEEECCCCC
T ss_pred eCCCeEEEEECCC---CcEEEEEeccCCcEEEEEEcCCCCEEEEEe-C--C-------Ce--EEEEeCCCCceeEEEcCC
Confidence 3578999999998 677777777778888999999999776642 1 1 22 344455443222222358
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
...|.+++|+|+|+.|++. ..|+.|.+||+.. ..+..+ |...+..+.|+|+|++|++++ .|+.|++||+.++
T Consensus 192 ~~~V~~v~~~p~~~~l~s~--s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s---~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSA--SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS---NDQTVRVWVVATK 266 (410)
T ss_dssp SSCEEEEEECSSSSEEEEE--ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTC
T ss_pred CCCEEEEEEeCCCCEEEEE--eCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc---CCCeEEEEECCCC
Confidence 8999999999999998884 6789999999954 455555 778899999999999999999 8999999999999
Q ss_pred eEEEeeeCC--CeeeEEEccC--------------------CCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCc
Q 020756 159 KQLGTTRAE--CSVTSEWSPD--------------------GRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDK 213 (321)
Q Consensus 159 ~~i~~~~~~--~~~~~~wSpd--------------------G~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~ 213 (321)
+++..+..| .+.+++|+|+ |.+|++++. |+.++|||+. |..+ +..|...
T Consensus 267 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~------D~~i~iwd~~~~~~~~~~~~h~~~ 340 (410)
T 1vyh_C 267 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR------DKTIKMWDVSTGMCLMTLVGHDNW 340 (410)
T ss_dssp CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET------TSEEEEEETTTTEEEEEEECCSSC
T ss_pred ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC------CCeEEEEECCCCceEEEEECCCCc
Confidence 888888776 6889999997 778999994 9999999985 5554 4567788
Q ss_pred eEEEEEecCCCCCCCCc
Q 020756 214 LFQAEWKPVSPDKFGDI 230 (321)
Q Consensus 214 ~~~~~w~P~~~~~~~~~ 230 (321)
+..+.|+|++..+++..
T Consensus 341 v~~v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 341 VRGVLFHSGGKFILSCA 357 (410)
T ss_dssp EEEEEECSSSSCEEEEE
T ss_pred EEEEEEcCCCCEEEEEe
Confidence 99999999998888753
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.89 E-value=8.8e-21 Score=173.79 Aligned_cols=174 Identities=11% Similarity=0.091 Sum_probs=141.4
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.. ++..............+.|+|+|++|+.... | | .+.+++............|
T Consensus 141 ~~dg~v~i~~~~~---~~~~~~~~~~~~~v~~~~~spdg~~lasg~~---d-------g--~i~iwd~~~~~~~~~~~~h 205 (321)
T 3ow8_A 141 THVGKVNIFGVES---GKKEYSLDTRGKFILSIAYSPDGKYLASGAI---D-------G--IINIFDIATGKLLHTLEGH 205 (321)
T ss_dssp CTTSEEEEEETTT---CSEEEEEECSSSCEEEEEECTTSSEEEEEET---T-------S--CEEEEETTTTEEEEEECCC
T ss_pred cCCCcEEEEEcCC---CceeEEecCCCceEEEEEECCCCCEEEEEcC---C-------C--eEEEEECCCCcEEEEEccc
Confidence 3468899999998 6666666655667789999999999877521 1 2 2556666554333333357
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
..+|.+++|+|+|++|++ +..|+.|+|||++. ..+..+ |...+.+++|+|+|++|++++ .|+.|+|||+.++
T Consensus 206 ~~~v~~l~~spd~~~l~s--~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s---~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVT--ASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS---SDKSVKVWDVGTR 280 (321)
T ss_dssp SSCCCEEEECTTSCEEEE--ECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTT
T ss_pred CCceeEEEEcCCCCEEEE--EcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe---CCCcEEEEeCCCC
Confidence 889999999999999888 47789999999964 455555 778899999999999999999 8999999999999
Q ss_pred eEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee
Q 020756 159 KQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 159 ~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
+++..+..| .+..++|+|||++|++++. |+.|+|||+
T Consensus 281 ~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~------d~~i~vwd~ 319 (321)
T 3ow8_A 281 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGD------DQEIHIYDC 319 (321)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEET------TCCEEEEEC
T ss_pred EEEEEEcCCCCcEEEEEECCCCCEEEEEeC------CCeEEEEeC
Confidence 999998776 7889999999999999994 999999996
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.88 E-value=1.5e-20 Score=170.39 Aligned_cols=198 Identities=12% Similarity=0.150 Sum_probs=155.1
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceeeeecC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGLVPLR 80 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~v~l~ 80 (321)
+..+.|+||++.+ ++.+.....+...+..+.|+|++++|+... .| |. +.+++.... ........
T Consensus 74 s~d~~i~vwd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs-~D---------~~--v~lWd~~~~~~~~~~~~~ 138 (304)
T 2ynn_A 74 SDDFRIRVFNYNT---GEKVVDFEAHPDYIRSIAVHPTKPYVLSGS-DD---------LT--VKLWNWENNWALEQTFEG 138 (304)
T ss_dssp ETTSEEEEEETTT---CCEEEEEECCSSCEEEEEECSSSSEEEEEE-TT---------SC--EEEEEGGGTTEEEEEECC
T ss_pred CCCCEEEEEECCC---CcEEEEEeCCCCcEEEEEEcCCCCEEEEEC-CC---------Ce--EEEEECCCCcchhhhhcc
Confidence 3568999999998 778877777788889999999999887542 11 22 445554433 22233346
Q ss_pred CCCCeEEEEECc-CCCEEEEEEccCCCeEEEEeCCC-ceeEEe---CCcCeeeEEEcC--CCCeEEEEccCCCCCcEEEE
Q 020756 81 KEGPVHDVQWSY-SGSEFAVVYGFMPASATIFNKKC-RPILEL---GSGPYNTVRWNP--KGKFLCLAGFGNLPGDMAFW 153 (321)
Q Consensus 81 ~~~~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~---~~~~~~~~~~sP--dG~~l~~~g~~n~~g~i~iw 153 (321)
|...|.+++|+| ++..|++ +..|+.|++||+.. .....+ +...++.+.|+| ++++|++++ .|+.|++|
T Consensus 139 h~~~v~~v~~~p~~~~~l~s--gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s---~D~~i~iW 213 (304)
T 2ynn_A 139 HEHFVMCVAFNPKDPSTFAS--GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS---DDLTIKIW 213 (304)
T ss_dssp CCSCEEEEEECTTCTTEEEE--EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE---TTSEEEEE
T ss_pred cCCcEEEEEECCCCCCEEEE--EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc---CCCeEEEE
Confidence 889999999999 5677877 47789999999853 333433 457789999987 788999999 89999999
Q ss_pred ECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCC
Q 020756 154 DYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPD 225 (321)
Q Consensus 154 D~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~ 225 (321)
|+++++++..+..| .+..+.|+|++.+|++++. |+.|+|||.. ++++ ...+...++.++|+|+...
T Consensus 214 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~------Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 214 DYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE------DGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (304)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET------TSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGG
T ss_pred eCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcC------CCeEEEEECCCCceeeeccCCCccEEEEEECCCCCc
Confidence 99999999999887 7888999999999999994 9999999995 4554 3345678999999998754
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.88 E-value=7.9e-21 Score=179.76 Aligned_cols=202 Identities=9% Similarity=0.138 Sum_probs=162.5
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
|..+.|+||++.. .+.+.....+...+..+.|+|+|++|+... . ...+.++++...........|
T Consensus 169 s~D~~i~iwd~~~---~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s-~-----------D~~i~~wd~~~~~~~~~~~~h 233 (410)
T 1vyh_C 169 SADMTIKLWDFQG---FECIRTMHGHDHNVSSVSIMPNGDHIVSAS-R-----------DKTIKMWEVQTGYCVKTFTGH 233 (410)
T ss_dssp ETTSCCCEEETTS---SCEEECCCCCSSCEEEEEECSSSSEEEEEE-T-----------TSEEEEEETTTCCEEEEEECC
T ss_pred eCCCeEEEEeCCC---CceeEEEcCCCCCEEEEEEeCCCCEEEEEe-C-----------CCeEEEEECCCCcEEEEEeCC
Confidence 3578899999988 677777777778889999999999886642 1 123566666544333333358
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe--CCcCeeeEEEcCC--------------------CCeE
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL--GSGPYNTVRWNPK--------------------GKFL 138 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~--~~~~~~~~~~sPd--------------------G~~l 138 (321)
...|.++.|+|+|..|+++ ..|+.|++||+... ....+ |...+.++.|+|+ |.+|
T Consensus 234 ~~~v~~~~~~~~g~~l~s~--s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 311 (410)
T 1vyh_C 234 REWVRMVRPNQDGTLIASC--SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311 (410)
T ss_dssp SSCEEEEEECTTSSEEEEE--ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEE
T ss_pred CccEEEEEECCCCCEEEEE--cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEE
Confidence 8899999999999999885 66899999999643 45555 7888999999997 6789
Q ss_pred EEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCc
Q 020756 139 CLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDK 213 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~ 213 (321)
++++ .|+.|++||+.+++++..+..| .+..+.|+|+|++|++++. |+.|+|||+. ++++ +..|...
T Consensus 312 ~sgs---~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~------D~~i~vwd~~~~~~~~~~~~h~~~ 382 (410)
T 1vyh_C 312 LSGS---RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD------DKTLRVWDYKNKRCMKTLNAHEHF 382 (410)
T ss_dssp EEEE---TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEET------TTEEEEECCTTSCCCEEEECCSSC
T ss_pred EEEe---CCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCceEEEEcCCCCc
Confidence 9998 8999999999999999988876 6889999999999999995 9999999995 4444 5567789
Q ss_pred eEEEEEecCCCCCCCC
Q 020756 214 LFQAEWKPVSPDKFGD 229 (321)
Q Consensus 214 ~~~~~w~P~~~~~~~~ 229 (321)
|..+.|+|+.+.+++.
T Consensus 383 v~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 383 VTSLDFHKTAPYVVTG 398 (410)
T ss_dssp EEEEEECSSSSCEEEE
T ss_pred EEEEEEcCCCCEEEEE
Confidence 9999999998887764
No 9
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=6.6e-21 Score=177.81 Aligned_cols=174 Identities=14% Similarity=0.086 Sum_probs=133.7
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee--eeecC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG--LVPLR 80 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~--~v~l~ 80 (321)
.++.|+||++.+ ++++.... ...++..+.|+|+|++|+... ...+..++....... .....
T Consensus 155 ~d~~i~iwd~~~---~~~~~~~~-~~~~V~~v~fspdg~~l~s~s-------------~~~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 155 VPAIMRIIDPSD---LTEKFEIE-TRGEVKDLHFSTDGKVVAYIT-------------GSSLEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp SSCEEEEEETTT---TEEEEEEE-CSSCCCEEEECTTSSEEEEEC-------------SSCEEEEETTTCCEEEEECCCC
T ss_pred CCCEEEEeECCC---CcEEEEeC-CCCceEEEEEccCCceEEecc-------------ceeEEEEEeccCcceeeeecCC
Confidence 578999999998 67776654 456788999999999987752 112445554333222 22234
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCC--eEEEEeCCCce-----eEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEE
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPA--SATIFNKKCRP-----ILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMA 151 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~--~i~i~d~~~~~-----~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~ 151 (321)
|...|.+++|+|+|+.++++...... .+.+||+.... ...+ +...+.+++|||||++|++++ .|+.|+
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs---~D~~V~ 294 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS---NDNSIA 294 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE---TTSCEE
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc---CCCEEE
Confidence 77889999999999999987533222 57778874332 2233 677899999999999999999 899999
Q ss_pred EEECCCCeEEEee-eCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 152 FWDYVDGKQLGTT-RAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 152 iwD~~~~~~i~~~-~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
|||+++++++..+ .+| .|++++|||||++|++++. |++|+||++.
T Consensus 295 iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~------D~tvrvw~ip 342 (365)
T 4h5i_A 295 LVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA------ANTIHIIKLP 342 (365)
T ss_dssp EEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET------TSEEEEEECC
T ss_pred EEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC------CCeEEEEEcC
Confidence 9999999999875 555 7999999999999999994 9999999984
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.88 E-value=1.5e-20 Score=170.50 Aligned_cols=202 Identities=11% Similarity=0.088 Sum_probs=157.6
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ +..+............+.|+|+|++|+... ....+.+++............|
T Consensus 32 ~~dg~v~lWd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s------------~d~~i~vwd~~~~~~~~~~~~h 96 (304)
T 2ynn_A 32 LYSGRVELWNYET---QVEVRSIQVTETPVRAGKFIARKNWIIVGS------------DDFRIRVFNYNTGEKVVDFEAH 96 (304)
T ss_dssp ETTSEEEEEETTT---TEEEEEEECCSSCEEEEEEEGGGTEEEEEE------------TTSEEEEEETTTCCEEEEEECC
T ss_pred cCCCcEEEEECCC---CceeEEeeccCCcEEEEEEeCCCCEEEEEC------------CCCEEEEEECCCCcEEEEEeCC
Confidence 3578999999998 777877777777888999999999987752 1123556666554333333358
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc--eeEEe--CCcCeeeEEEcC-CCCeEEEEccCCCCCcEEEEECC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR--PILEL--GSGPYNTVRWNP-KGKFLCLAGFGNLPGDMAFWDYV 156 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~--~~~~~--~~~~~~~~~~sP-dG~~l~~~g~~n~~g~i~iwD~~ 156 (321)
.+.|.+++|+|++.+|++ +..|+.|++||++.. ....+ |...+.++.|+| ++.+|++++ .|+.|++||+.
T Consensus 97 ~~~v~~~~~~~~~~~l~s--gs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs---~D~~v~iwd~~ 171 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLS--GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC---LDRTVKVWSLG 171 (304)
T ss_dssp SSCEEEEEECSSSSEEEE--EETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE---TTSEEEEEETT
T ss_pred CCcEEEEEEcCCCCEEEE--ECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe---CCCeEEEEECC
Confidence 899999999999999887 467899999999643 33344 788899999999 678999999 99999999998
Q ss_pred CCeEEEeeeC---CCeeeEEEcc--CCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCCCCC
Q 020756 157 DGKQLGTTRA---ECSVTSEWSP--DGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 157 ~~~~i~~~~~---~~~~~~~wSp--dG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~~~~ 228 (321)
+......+.. ..+..+.|+| ++.+|++++. |+.|+|||+. ++++ +..|...+..+.|+|+.+.+++
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~------D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD------DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp CSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEET------TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred CCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcC------CCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEE
Confidence 7754444432 2677788886 7889999995 9999999995 4444 5568889999999999887776
Q ss_pred C
Q 020756 229 D 229 (321)
Q Consensus 229 ~ 229 (321)
.
T Consensus 246 ~ 246 (304)
T 2ynn_A 246 G 246 (304)
T ss_dssp E
T ss_pred E
Confidence 5
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.88 E-value=1.6e-20 Score=172.96 Aligned_cols=201 Identities=12% Similarity=0.175 Sum_probs=152.1
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee--c
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP--L 79 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~--l 79 (321)
+..+.|+||++.+ ++.+.....+......+.|+|+|++|+... . | + .+.+++..+....... .
T Consensus 95 s~D~~v~lwd~~~---~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~-~--d-------~--~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 95 SWDKTLRLWDLRT---GTTYKRFVGHQSEVYSVAFSPDNRQILSAG-A--E-------R--EIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp ETTSEEEEEETTS---SCEEEEEECCCSCEEEEEECSSTTEEEEEE-T--T-------S--CEEEEESSSCEEEECCTTT
T ss_pred cCCCcEEEEECCC---CcEEEEEcCCCCcEEEEEECCCCCEEEEEc-C--C-------C--EEEEEeccCCceeeeeccc
Confidence 3578999999998 677777777788889999999999887642 1 1 2 2455555543211111 1
Q ss_pred CCCCCeEEEEECcCC----------CEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCC
Q 020756 80 RKEGPVHDVQWSYSG----------SEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLP 147 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g----------~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~ 147 (321)
.|...|.+++|+|++ .+|++ +..++.|.+||........+ |...+++++|+|+|++|++++ .|
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs---~d 234 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFAS--VGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGG---KD 234 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEE--EETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEE---TT
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEE--EcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEc---CC
Confidence 477889999999987 56666 46789999999877666665 788999999999999999999 99
Q ss_pred CcEEEEECCC-CeEEEeee-CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-eeE--E-------------e
Q 020756 148 GDMAFWDYVD-GKQLGTTR-AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LFF--K-------------K 209 (321)
Q Consensus 148 g~i~iwD~~~-~~~i~~~~-~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l~--~-------------~ 209 (321)
+.|++||+.+ ......+. .+.+..++|+|++++++++. |+.++||++... .+. . .
T Consensus 235 g~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 235 KKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-------DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKG 307 (343)
T ss_dssp CEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-------SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCC
T ss_pred CeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-------CCCEEEEEeCCCCCCceEEeecCcchhhhhhcC
Confidence 9999999953 33444443 34789999999999887666 899999998532 211 1 3
Q ss_pred ccCceEEEEEecCCCCCCCC
Q 020756 210 MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 210 ~~~~~~~~~w~P~~~~~~~~ 229 (321)
+...+..++|+|++..++..
T Consensus 308 ~~~~v~~~~~sp~g~~l~sg 327 (343)
T 2xzm_R 308 KNPQCTSLAWNALGKKLFAG 327 (343)
T ss_dssp SCCCEEEEEECSSSCCEEEE
T ss_pred CCCceEEEEECCCCCeEEEe
Confidence 45678999999999888765
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.88 E-value=3.4e-20 Score=169.39 Aligned_cols=205 Identities=14% Similarity=0.085 Sum_probs=159.5
Q ss_pred CCCceEEEEEcCCcCC--CCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec
Q 020756 2 GSPASVQIYACGKDLQ--SQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL 79 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~--~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l 79 (321)
|.++.|+||++..... +.++.....+...+..+.|+|+|++|+... ....+.+++...........
T Consensus 37 s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s------------~D~~v~~wd~~~~~~~~~~~ 104 (319)
T 3frx_A 37 SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS------------WDKTLRLWDVATGETYQRFV 104 (319)
T ss_dssp ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE------------TTSEEEEEETTTTEEEEEEE
T ss_pred cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe------------CCCEEEEEECCCCCeeEEEc
Confidence 4578999999975210 123444455667778899999999987652 11235666665553333334
Q ss_pred CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCC------CCeEEEEccCCCCCcEE
Q 020756 80 RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNPK------GKFLCLAGFGNLPGDMA 151 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPd------G~~l~~~g~~n~~g~i~ 151 (321)
.|.+.|.+++|+|++..|++ +..|+.|++||+++..+..+ |...+.++.|+|. +.+|++++ .|+.|+
T Consensus 105 ~h~~~v~~~~~~~~~~~l~s--~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~---~d~~i~ 179 (319)
T 3frx_A 105 GHKSDVMSVDIDKKASMIIS--GSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG---NDKMVK 179 (319)
T ss_dssp CCSSCEEEEEECTTSCEEEE--EETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEE---TTSCEE
T ss_pred cCCCcEEEEEEcCCCCEEEE--EeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe---CCCEEE
Confidence 68999999999999999888 47789999999998877777 6788999999995 44888888 899999
Q ss_pred EEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-ceeEE-eccCceEEEEEecCCCCCC
Q 020756 152 FWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-SLFFK-KMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 152 iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-~~l~~-~~~~~~~~~~w~P~~~~~~ 227 (321)
+||+++++....+..| .+..++|+|||++|++++. |+.|+|||+.. +.+.. .....+..++|+|+...++
T Consensus 180 ~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la 253 (319)
T 3frx_A 180 AWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK------DGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLA 253 (319)
T ss_dssp EEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET------TCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEE
T ss_pred EEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEE
Confidence 9999999888888776 7889999999999999994 99999999954 44433 3456899999999987666
Q ss_pred CC
Q 020756 228 GD 229 (321)
Q Consensus 228 ~~ 229 (321)
..
T Consensus 254 ~~ 255 (319)
T 3frx_A 254 AA 255 (319)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.87 E-value=1.4e-20 Score=173.81 Aligned_cols=203 Identities=14% Similarity=0.242 Sum_probs=149.6
Q ss_pred CCCceEEEEEcCCcCCCCceeeee---cccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRS---FFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP 78 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~---~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~ 78 (321)
|..+.|+||++.. +..+.... -+...+..+.|+|+|++|+... .| +...||.+.... ......
T Consensus 35 ~~D~~i~iw~~~~---~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s---~D-------~~v~iw~~~~~~-~~~~~~ 100 (345)
T 3fm0_A 35 GGDRRIRIWGTEG---DSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS---FD-------ATTCIWKKNQDD-FECVTT 100 (345)
T ss_dssp ETTSCEEEEEEET---TEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE---TT-------SCEEEEEECCC--EEEEEE
T ss_pred cCCCeEEEEEcCC---CcceeeeeeccccCCcEEEEEECCCCCEEEEEE---CC-------CcEEEEEccCCC-eEEEEE
Confidence 4578999999987 44333322 2456778899999999887652 11 333344332221 122222
Q ss_pred -cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc----eeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEE
Q 020756 79 -LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR----PILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMA 151 (321)
Q Consensus 79 -l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~----~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~ 151 (321)
..|.+.|.+++|+|+|++|+++ ..|+.|.+||+... .+..+ |...+.++.|+|+|++|++++ .|+.|+
T Consensus 101 ~~~h~~~v~~v~~sp~~~~l~s~--s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s---~d~~i~ 175 (345)
T 3fm0_A 101 LEGHENEVKSVAWAPSGNLLATC--SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS---YDDTVK 175 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEE--ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE---TTSCEE
T ss_pred ccCCCCCceEEEEeCCCCEEEEE--ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe---CCCcEE
Confidence 3588999999999999999985 67899999998543 23334 678899999999999999999 899999
Q ss_pred EEECCCCe--EEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec--C--------------ceeEE---
Q 020756 152 FWDYVDGK--QLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN--G--------------SLFFK--- 208 (321)
Q Consensus 152 iwD~~~~~--~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~--g--------------~~l~~--- 208 (321)
+||..+++ ++..+..| .+..++|+|||++|++++. |+.|+||+.. + ..+..
T Consensus 176 ~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~------D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T 3fm0_A 176 LYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD------DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSG 249 (345)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET------TSCEEEEEEECTTCTTCCCCC---CEEEEEEEECS
T ss_pred EEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC------CCeEEEeccccCCCCccceeeccCCccceeEEecC
Confidence 99998875 44566665 7889999999999999995 9999999962 1 11111
Q ss_pred eccCceEEEEEecCCCCCCCC
Q 020756 209 KMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 209 ~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.|...++++.|+|+...+++.
T Consensus 250 ~h~~~v~~v~~~~~~~~l~s~ 270 (345)
T 3fm0_A 250 FHSRTIYDIAWCQLTGALATA 270 (345)
T ss_dssp SCSSCEEEEEECTTTCCEEEE
T ss_pred CCCCcEEEEEEecCCCEEEEE
Confidence 155689999999998877765
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.87 E-value=8.7e-20 Score=166.63 Aligned_cols=200 Identities=15% Similarity=0.217 Sum_probs=157.2
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ ++.+.....+...+..+.|+|+|+.|+... . | + .+.+++..+. .......|
T Consensus 84 s~D~~v~~wd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~--D-------~--~i~vwd~~~~-~~~~~~~h 147 (319)
T 3frx_A 84 SWDKTLRLWDVAT---GETYQRFVGHKSDVMSVDIDKKASMIISGS-R--D-------K--TIKVWTIKGQ-CLATLLGH 147 (319)
T ss_dssp ETTSEEEEEETTT---TEEEEEEECCSSCEEEEEECTTSCEEEEEE-T--T-------S--CEEEEETTSC-EEEEECCC
T ss_pred eCCCEEEEEECCC---CCeeEEEccCCCcEEEEEEcCCCCEEEEEe-C--C-------C--eEEEEECCCC-eEEEEecc
Confidence 3578999999998 777777777788899999999999887642 1 1 2 2455566554 23333468
Q ss_pred CCCeEEEEECcCCC------EEEEEEccCCCeEEEEeCCCc-eeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEE
Q 020756 82 EGPVHDVQWSYSGS------EFAVVYGFMPASATIFNKKCR-PILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAF 152 (321)
Q Consensus 82 ~~~v~~~~wsP~g~------~l~~~~g~~~~~i~i~d~~~~-~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~i 152 (321)
.+.|.++.|+|.+. .|++ +..++.|++||++.. ....+ |...++++.|+|+|++|++++ .|+.|+|
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s--~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~---~dg~i~i 222 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIIS--AGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAG---KDGEIML 222 (319)
T ss_dssp SSCEEEEEECCC------CCEEEE--EETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEE---TTCEEEE
T ss_pred CCcEEEEEEccCCCCCCCccEEEE--EeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEe---CCCeEEE
Confidence 89999999999543 5555 567899999999654 44455 788999999999999999999 8999999
Q ss_pred EECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE-e----------ccCceEEEEEe
Q 020756 153 WDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK-K----------MFDKLFQAEWK 220 (321)
Q Consensus 153 wD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~-~----------~~~~~~~~~w~ 220 (321)
||+.+++++..+..+ .+..++|+|||.+|++++ +++++||+++...+.. . +...+..++|+
T Consensus 223 wd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~-------~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 295 (319)
T 3frx_A 223 WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT-------ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWS 295 (319)
T ss_dssp EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEE-------TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEEC
T ss_pred EECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEc-------CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEEC
Confidence 999999998888776 788999999999999888 7889999997654421 1 23468899999
Q ss_pred cCCCCCCCC
Q 020756 221 PVSPDKFGD 229 (321)
Q Consensus 221 P~~~~~~~~ 229 (321)
|++..+++.
T Consensus 296 pdg~~l~sg 304 (319)
T 3frx_A 296 ADGQTLFAG 304 (319)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEe
Confidence 999888765
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.87 E-value=1.6e-19 Score=167.50 Aligned_cols=205 Identities=12% Similarity=0.177 Sum_probs=156.6
Q ss_pred CCCceEEEEEcCCcCC---CCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee
Q 020756 2 GSPASVQIYACGKDLQ---SQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP 78 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~---~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~ 78 (321)
|..+.|+||++..... .........+......+.|+|++..|+... ....+.++++.........
T Consensus 125 ~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s------------~D~~v~lwd~~~~~~~~~~ 192 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS------------GDGTCALWDVESGQLLQSF 192 (354)
T ss_dssp STTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEE------------TTSEEEEEETTTCCEEEEE
T ss_pred eCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEe------------CCCcEEEEeCCCCeEEEEE
Confidence 4578899999875210 122334444566778899999999887642 1223566666554333333
Q ss_pred cCCCCCeEEEEECc--CCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEE
Q 020756 79 LRKEGPVHDVQWSY--SGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFW 153 (321)
Q Consensus 79 l~~~~~v~~~~wsP--~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iw 153 (321)
..|...|.+++|+| +|+.|++ +..|+.+.+||++. ..+..+ |...++++.|+|+|++|++++ .|+.|++|
T Consensus 193 ~~h~~~v~~~~~~~~~~g~~l~s--gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s---~D~~v~lw 267 (354)
T 2pbi_B 193 HGHGADVLCLDLAPSETGNTFVS--GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGS---DDATCRLY 267 (354)
T ss_dssp ECCSSCEEEEEECCCSSCCEEEE--EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSCEEEE
T ss_pred cCCCCCeEEEEEEeCCCCCEEEE--EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEe---CCCeEEEE
Confidence 35888999999988 4677777 46789999999964 455555 788999999999999999999 89999999
Q ss_pred ECCCCeEEEeeeCC----CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCcee--EEeccCceEEEEEecCCCCC
Q 020756 154 DYVDGKQLGTTRAE----CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLF--FKKMFDKLFQAEWKPVSPDK 226 (321)
Q Consensus 154 D~~~~~~i~~~~~~----~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l--~~~~~~~~~~~~w~P~~~~~ 226 (321)
|+++++.+..+..+ .++.++|+|+|++|++++. |+.++|||+ +|..+ +..|...+..++|+|++..+
T Consensus 268 d~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~------d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l 341 (354)
T 2pbi_B 268 DLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN------DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAF 341 (354)
T ss_dssp ETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET------TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCE
T ss_pred ECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC------CCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEE
Confidence 99998877766543 5678999999999999995 999999998 56655 44678899999999998877
Q ss_pred CCC
Q 020756 227 FGD 229 (321)
Q Consensus 227 ~~~ 229 (321)
++.
T Consensus 342 ~sg 344 (354)
T 2pbi_B 342 CSG 344 (354)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 16
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.86 E-value=7.3e-20 Score=178.78 Aligned_cols=198 Identities=16% Similarity=0.250 Sum_probs=159.7
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.. +.+.....+......+.|+|+|+.|+.... . | .+.+++..+..... ...|.
T Consensus 323 ~d~~i~~w~~~~----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-----d-----g--~v~~~~~~~~~~~~-~~~~~ 385 (577)
T 2ymu_A 323 DDKTVKLWNRNG----QHLQTLTGHSSSVWGVAFSPDGQTIASASD-----D-----K--TVKLWNRNGQLLQT-LTGHS 385 (577)
T ss_dssp TTSCEEEEETTS----CEEEEECCCSSCEEEEEECTTSSEEEEEET-----T-----S--EEEEEETTCCEEEE-EECCS
T ss_pred CCCeEEEEeCCC----CeeEEEeCCCCCEEEEEECCCCCEEEEEeC-----C-----C--EEEEEcCCCCEEEE-ecCCC
Confidence 467899999755 455555556677788999999999877521 0 2 24555555543222 23578
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeE
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQ 160 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~ 160 (321)
..|.+++|+|+|++|++. ..++.|.+||..++.+..+ |...+.++.|+||+++|++++ .++.|++||+ +++.
T Consensus 386 ~~v~~~~~s~dg~~l~~~--~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~---~d~~v~~w~~-~~~~ 459 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASA--SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASAS---DDKTVKLWNR-NGQL 459 (577)
T ss_dssp SCEEEEEECTTSSCEEEE--ETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSEEEEEET-TSCE
T ss_pred CCeEEEEECCCCCEEEEE--eCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEc---CCCEEEEEEC-CCCE
Confidence 899999999999999884 6688999999988777766 788999999999999999999 8999999997 5666
Q ss_pred EEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee--EEeccCceEEEEEecCCCCCCCC
Q 020756 161 LGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 161 i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+..+..| .+..++|||||++|++++. |+.|+||+.+|+++ +..|...+..++|+|++..+++.
T Consensus 460 ~~~~~~~~~~v~~~~~spd~~~las~~~------d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~ 526 (577)
T 2ymu_A 460 LQTLTGHSSSVRGVAFSPDGQTIASASD------DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASA 526 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeC------CCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEE
Confidence 7777665 7889999999999999994 99999999999877 55677899999999999888765
No 17
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.86 E-value=2.5e-19 Score=161.99 Aligned_cols=203 Identities=9% Similarity=0.092 Sum_probs=156.5
Q ss_pred CceEEEEEcCCcCCCCceeeee--cccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc--eeeeec
Q 020756 4 PASVQIYACGKDLQSQPLARRS--FFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH--EGLVPL 79 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~--~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~--~~~v~l 79 (321)
.+.|+||++........+.... -.......+.|+|+|++|++... + | .+.+++..... ......
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d---------~--~i~~~d~~~~~~~~~~~~~ 138 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE-A---------S--TLSIWDLAAPTPRIKAELT 138 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES-S---------S--EEEEEECCCC--EEEEEEE
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC-C---------C--cEEEEECCCCCcceeeecc
Confidence 7899999998732122333333 34567789999999998877521 0 2 35555655442 222233
Q ss_pred CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC
Q 020756 80 RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV 156 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~ 156 (321)
.|...|.+++|+|+++.|++. ..++.+.+||++. ..+..+ |...+.++.|+|+|++|++++ .++.|++||++
T Consensus 139 ~~~~~i~~~~~~~~~~~l~~~--~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~~~d~~ 213 (337)
T 1gxr_A 139 SSAPACYALAISPDSKVCFSC--CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG---LDNTVRSWDLR 213 (337)
T ss_dssp CSSSCEEEEEECTTSSEEEEE--ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSEEEEEETT
T ss_pred cCCCceEEEEECCCCCEEEEE--eCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe---cCCcEEEEECC
Confidence 578899999999999999885 6688999999965 455555 678899999999999999998 89999999999
Q ss_pred CCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee--EEeccCceEEEEEecCCCCCCCC
Q 020756 157 DGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 157 ~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+++.+..+... .+..++|+|+|++|++++. ++.+++|++....+ ...+...+..+.|+|+...++..
T Consensus 214 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (337)
T 1gxr_A 214 EGRQLQQHDFTSQIFSLGYCPTGEWLAVGME------SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVST 283 (337)
T ss_dssp TTEEEEEEECSSCEEEEEECTTSSEEEEEET------TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEeeecCCCceEEEEECCCCCEEEEEcC------CCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEe
Confidence 99888877664 7889999999999999994 89999999965544 44566789999999998877754
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.86 E-value=1.8e-19 Score=165.96 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=150.6
Q ss_pred CCCceEEEEEcCCcCC----CCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee
Q 020756 2 GSPASVQIYACGKDLQ----SQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV 77 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~----~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v 77 (321)
+.++.|+||++..... +.+......+...+..+.|+|+|.+|+... .| + .+.+++.........
T Consensus 46 s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s-~D---------~--~v~lwd~~~~~~~~~ 113 (343)
T 2xzm_R 46 SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS-WD---------K--TLRLWDLRTGTTYKR 113 (343)
T ss_dssp ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE-TT---------S--EEEEEETTSSCEEEE
T ss_pred cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc-CC---------C--cEEEEECCCCcEEEE
Confidence 3568999999976210 123344445566788999999999876542 11 2 355666654433333
Q ss_pred ecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe-----CCcCeeeEEEcCCC----------CeEEEEc
Q 020756 78 PLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL-----GSGPYNTVRWNPKG----------KFLCLAG 142 (321)
Q Consensus 78 ~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~-----~~~~~~~~~~sPdG----------~~l~~~g 142 (321)
...|.+.|.+++|+|+|++|+++ ..|+.|++||+.+.....+ |...+.++.|+|++ .+|++++
T Consensus 114 ~~~h~~~v~~v~~sp~~~~l~s~--~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 114 FVGHQSEVYSVAFSPDNRQILSA--GAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp EECCCSCEEEEEECSSTTEEEEE--ETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred EcCCCCcEEEEEECCCCCEEEEE--cCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc
Confidence 34689999999999999999885 6689999999976655443 56679999999997 7899998
Q ss_pred cCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCce-eEE-eccCceEEE
Q 020756 143 FGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSL-FFK-KMFDKLFQA 217 (321)
Q Consensus 143 ~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~-l~~-~~~~~~~~~ 217 (321)
.|+.|++||. +.+.+..+..| .+..++|+|||++|++++. |+.|+|||+ .... ... .+...+..+
T Consensus 192 ---~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~------dg~v~iwd~~~~~~~~~~~~~~~~v~~v 261 (343)
T 2xzm_R 192 ---WDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGK------DKKLLIWDILNLTYPQREFDAGSTINQI 261 (343)
T ss_dssp ---TTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEET------TCEEEEEESSCCSSCSEEEECSSCEEEE
T ss_pred ---CCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcC------CCeEEEEECCCCcccceeecCCCcEEEE
Confidence 8999999995 56666667665 7889999999999999994 999999998 3332 222 244579999
Q ss_pred EEecCCCCCCC
Q 020756 218 EWKPVSPDKFG 228 (321)
Q Consensus 218 ~w~P~~~~~~~ 228 (321)
+|+|+...+..
T Consensus 262 ~~sp~~~~la~ 272 (343)
T 2xzm_R 262 AFNPKLQWVAV 272 (343)
T ss_dssp EECSSSCEEEE
T ss_pred EECCCCCEEEE
Confidence 99999765543
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.86 E-value=6.8e-20 Score=168.70 Aligned_cols=172 Identities=13% Similarity=0.142 Sum_probs=138.9
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+ ++.+.....+......+.|+|+|++++... .| | .+.+++............|.
T Consensus 162 ~d~~i~~wd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~-~d---------~--~v~~wd~~~~~~~~~~~~h~ 226 (340)
T 1got_B 162 GDTTCALWDIET---GQQTTTFTGHTGDVMSLSLAPDTRLFVSGA-CD---------A--SAKLWDVREGMCRQTFTGHE 226 (340)
T ss_dssp TTSCEEEEETTT---TEEEEEECCCSSCEEEEEECTTSSEEEEEE-TT---------S--CEEEEETTTCSEEEEECCCS
T ss_pred CCCcEEEEECCC---CcEEEEEcCCCCceEEEEECCCCCEEEEEe-CC---------C--cEEEEECCCCeeEEEEcCCc
Confidence 468899999998 677777776778889999999999776542 11 2 25566665443333334588
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe-C---CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL-G---SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD 157 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~-~---~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~ 157 (321)
..|.+++|+|+|+.|++. ..|+.|++||++.. .+..+ + ...+.++.|+|+|++|++++ .++.|++||+.+
T Consensus 227 ~~v~~v~~~p~~~~l~s~--s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~---~d~~i~vwd~~~ 301 (340)
T 1got_B 227 SDINAICFFPNGNAFATG--SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY---DDFNCNVWDALK 301 (340)
T ss_dssp SCEEEEEECTTSSEEEEE--ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE---TTSEEEEEETTT
T ss_pred CCEEEEEEcCCCCEEEEE--cCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC---CCCeEEEEEccc
Confidence 999999999999999884 67899999999654 45555 2 23689999999999999999 899999999999
Q ss_pred CeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEe
Q 020756 158 GKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFH 200 (321)
Q Consensus 158 ~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~ 200 (321)
++.+..+.+| .+.+++|+|||++|++++. |+.|+|||
T Consensus 302 ~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~------D~~i~iWd 340 (340)
T 1got_B 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSW------DSFLKIWN 340 (340)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSCEEEEET------TSCEEEEC
T ss_pred CcEeeEeecCCCcEEEEEEcCCCCEEEEEcC------CccEEecC
Confidence 9988888877 7889999999999999994 99999996
No 20
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.86 E-value=1.4e-19 Score=170.07 Aligned_cols=201 Identities=14% Similarity=0.162 Sum_probs=152.2
Q ss_pred CCceEEEEEcCCcCCCCceeeeeccc------------------CccceEEeCCCCCeeEEEEEecccCCCceeecceeE
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFR------------------CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKL 64 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~------------------~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l 64 (321)
....|+||++.. ++.+....... ..+..+.|+|+|++|+... . | | .+
T Consensus 83 ~~~~v~i~~~~~---g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~-~--d-------~--~i 147 (393)
T 1erj_A 83 CNKTTQVYRVSD---GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA-E--D-------R--LI 147 (393)
T ss_dssp CBSCEEEEETTT---CCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE-T--T-------S--CE
T ss_pred cCCcEEEEEecC---CCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc-C--C-------C--eE
Confidence 346799999987 55554433221 1256899999999987642 1 1 2 35
Q ss_pred EEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe-CCcCeeeEEEcC-CCCeEEEE
Q 020756 65 NYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL-GSGPYNTVRWNP-KGKFLCLA 141 (321)
Q Consensus 65 ~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~-~~~~~~~~~~sP-dG~~l~~~ 141 (321)
.+++............|.+.|.+++|+|+|+.|++. ..|+.+++||++.. ....+ +...+.++.|+| +|++|+++
T Consensus 148 ~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~--s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 225 (393)
T 1erj_A 148 RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG--SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAG 225 (393)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE--ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEE
T ss_pred EEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEe--cCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEE
Confidence 666766553334444689999999999999999874 66899999999654 44444 677899999999 89999999
Q ss_pred ccCCCCCcEEEEECCCCeEEEee-------eCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC---------
Q 020756 142 GFGNLPGDMAFWDYVDGKQLGTT-------RAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG--------- 203 (321)
Q Consensus 142 g~~n~~g~i~iwD~~~~~~i~~~-------~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g--------- 203 (321)
+ .++.|++||+.+++.+..+ ..| .+..++|+|||++|++++. |+.|+|||+..
T Consensus 226 s---~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~------d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 226 S---LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL------DRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp E---TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET------TSEEEEEEC-----------
T ss_pred c---CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC------CCEEEEEECCCCCCcccccC
Confidence 9 8999999999998877665 233 6889999999999999994 99999999843
Q ss_pred ----cee--EEeccCceEEEEEecCCCCCCCC
Q 020756 204 ----SLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 204 ----~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.+. +..|...+..+.|+|+...+++.
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 328 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSG 328 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEE
Confidence 122 44577789999999998887765
No 21
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.86 E-value=4.8e-21 Score=177.34 Aligned_cols=201 Identities=15% Similarity=0.117 Sum_probs=150.0
Q ss_pred CCCceEEEEEcCCcCCC--CceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc---eee
Q 020756 2 GSPASVQIYACGKDLQS--QPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH---EGL 76 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~--~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~---~~~ 76 (321)
+..+.|+||++.. + +.+.....+......+.|+|+|++|+... . | |. +.+++..... ...
T Consensus 30 ~~d~~i~iw~~~~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~--d-------~~--v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 30 TATNQVELYEQDG---NGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS-Q--D-------RN--AYVYEKRPDGTWKQTL 94 (377)
T ss_dssp CSSSCBCEEEEET---TEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-T--T-------SS--EEEC------CCCCEE
T ss_pred cCCCEEEEEEccC---CceEEEEEEecCCceEEEEEEeCCCCEEEEEe-C--C-------Ce--EEEEEcCCCCceeeee
Confidence 3678999999987 5 55666666677888999999999887652 1 1 22 3444443332 223
Q ss_pred eecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCce----eEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCc
Q 020756 77 VPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRP----ILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGD 149 (321)
Q Consensus 77 v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~----~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~ 149 (321)
....|.+.|.+++|+|+|+.|++. ..++.+.+||++... ...+ |...+.++.|+|+|++|++++ .++.
T Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~---~d~~ 169 (377)
T 3dwl_C 95 VLLRLNRAATFVRWSPNEDKFAVG--SGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC---ADRK 169 (377)
T ss_dssp ECCCCSSCEEEEECCTTSSCCEEE--ESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE---SSSC
T ss_pred EecccCCceEEEEECCCCCEEEEE--ecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe---CCCE
Confidence 334588999999999999999885 668899999996542 4444 678899999999999999999 8999
Q ss_pred EEEEECC------------------CCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Cce---
Q 020756 150 MAFWDYV------------------DGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSL--- 205 (321)
Q Consensus 150 i~iwD~~------------------~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~--- 205 (321)
|++||+. .++++..+ .| .+..++|+|||++|++++. |+.|+|||+. ++.
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~------d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH------DSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET------TTEEC-CEECSTTSCEE
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC------CCcEEEEECCCCCCcce
Confidence 9999985 34566666 44 6889999999999999994 9999999995 433
Q ss_pred -e--EEeccCceEEEEEecCCCCCCCC
Q 020756 206 -F--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 206 -l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+ ...+...+..+.|+|++..++..
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEE
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEE
Confidence 3 55677789999999998777654
No 22
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.86 E-value=3.7e-19 Score=160.81 Aligned_cols=201 Identities=8% Similarity=0.089 Sum_probs=154.2
Q ss_pred CCceEEEEEcCCcCCCC--ceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecC
Q 020756 3 SPASVQIYACGKDLQSQ--PLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLR 80 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~--~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~ 80 (321)
..+.|+||++.. ++ ..............+.|+|+|++|++... ...+++++............
T Consensus 117 ~d~~i~~~d~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------------dg~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 117 EASTLSIWDLAA---PTPRIKAELTSSAPACYALAISPDSKVCFSCCS------------DGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp SSSEEEEEECCC---C--EEEEEEECSSSCEEEEEECTTSSEEEEEET------------TSCEEEEETTTTEEEEEECC
T ss_pred CCCcEEEEECCC---CCcceeeecccCCCceEEEEECCCCCEEEEEeC------------CCcEEEEeCCCCceeeeeec
Confidence 468899999988 44 33444445566789999999998877521 11256667655533333334
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
|.+.|.+++|+|+++.|++. ..++.+.+||++.. .+..+ +...+.++.|+|+|++|++++ .++.|++||+.++
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~--~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTG--GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGM---ESSNVEVLHVNKP 256 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTSS
T ss_pred ccCceEEEEECCCCCEEEEE--ecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEc---CCCcEEEEECCCC
Confidence 78899999999999999885 66889999999644 44455 678899999999999999998 8899999999988
Q ss_pred eEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee-EEeccCceEEEEEecCCCCCCCC
Q 020756 159 KQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF-FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 159 ~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l-~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+......+. .+..++|+|||++|++++. |+.+++|++. ++.+ ...+...+..+.|+|+...++..
T Consensus 257 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 324 (337)
T 1gxr_A 257 DKYQLHLHESCVLSLKFAYCGKWFVSTGK------DNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTG 324 (337)
T ss_dssp CEEEECCCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred CeEEEcCCccceeEEEECCCCCEEEEecC------CCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEe
Confidence 765443332 7889999999999999994 9999999985 4444 33466789999999998776654
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.86 E-value=2.2e-20 Score=173.66 Aligned_cols=201 Identities=10% Similarity=0.082 Sum_probs=141.6
Q ss_pred CCceEEEEEcCCcCCCCceeeee----cccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee
Q 020756 3 SPASVQIYACGKDLQSQPLARRS----FFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP 78 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~----~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~ 78 (321)
..+.|+||++.+ ++.+.... -+...+..+.|+|+|++|+... . | | .+.+++..........
T Consensus 113 ~dg~v~lWd~~~---~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs-~--d-------g--~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 113 DSGAVELWEILE---KESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG-K--D-------F--SVKVWDLSQKAVLKSY 177 (357)
T ss_dssp TTSCEEEC-----------CCCCEEECCCSSCEEEEEECSSSSEEEEEE-T--T-------S--CEEEEETTTTEEEEEE
T ss_pred CCCEEEEeeccc---cceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe-C--C-------C--eEEEEECCCCcEEEEE
Confidence 467899999988 44433222 2345678899999999987642 1 1 2 2556666555333333
Q ss_pred cCCCCCeEEEEECcCCCE-EEEEEccCCCeEEEEeCCC-ceeEEe----CCcCeeeEEEcCCC-CeEEEEccCCCCCcEE
Q 020756 79 LRKEGPVHDVQWSYSGSE-FAVVYGFMPASATIFNKKC-RPILEL----GSGPYNTVRWNPKG-KFLCLAGFGNLPGDMA 151 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~-l~~~~g~~~~~i~i~d~~~-~~~~~~----~~~~~~~~~~sPdG-~~l~~~g~~n~~g~i~ 151 (321)
..|.+.|.+++|+|++.. |++ +..++.|.|||++. +.+..+ +...+.++.|+|++ .+|++++ .++.|+
T Consensus 178 ~~h~~~v~~v~~s~~~~~~~~s--~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~---~d~~i~ 252 (357)
T 4g56_B 178 NAHSSEVNCVAACPGKDTIFLS--CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD---ETGNVS 252 (357)
T ss_dssp CCCSSCEEEEEECTTCSSCEEE--EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE---SSSCEE
T ss_pred cCCCCCEEEEEEccCCCceeee--eccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee---ccccee
Confidence 358899999999999874 444 46689999999954 333332 46678999999986 4667777 789999
Q ss_pred EEECCCCeEEEeeeCC--CeeeEEEccCC-CEEEEEEcCCceeecCcEEEEeecCc-ee-EEeccCceEEEEEec-CCCC
Q 020756 152 FWDYVDGKQLGTTRAE--CSVTSEWSPDG-RYFMTATTAPRLQIDNGIKIFHHNGS-LF-FKKMFDKLFQAEWKP-VSPD 225 (321)
Q Consensus 152 iwD~~~~~~i~~~~~~--~~~~~~wSpdG-~~l~t~~s~~rl~~d~~v~iw~~~g~-~l-~~~~~~~~~~~~w~P-~~~~ 225 (321)
+||+++++++..+..+ .++.++|||+| ++|++++ .|+.|+|||+... ++ ...|...|..++|+| ++..
T Consensus 253 ~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs------~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~ 326 (357)
T 4g56_B 253 LVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS------EDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSK 326 (357)
T ss_dssp EEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE------TTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTE
T ss_pred EEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe------CCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCE
Confidence 9999999888888766 78999999997 5778887 4999999999644 44 335778999999999 4555
Q ss_pred CCCC
Q 020756 226 KFGD 229 (321)
Q Consensus 226 ~~~~ 229 (321)
+++.
T Consensus 327 l~s~ 330 (357)
T 4g56_B 327 FTTV 330 (357)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 24
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.86 E-value=1.3e-19 Score=166.50 Aligned_cols=202 Identities=13% Similarity=0.137 Sum_probs=156.0
Q ss_pred CCCceEEEEEcCCcCCCC--ceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-e-eee
Q 020756 2 GSPASVQIYACGKDLQSQ--PLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-E-GLV 77 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~--~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~-~~v 77 (321)
+..+.|+||++.. ++ .+.....+......+.|+|+|++|++.. .| |. +.+++..... . ...
T Consensus 27 ~~d~~v~i~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d---------g~--i~vwd~~~~~~~~~~~ 91 (372)
T 1k8k_C 27 PNNHEVHIYEKSG---NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TD---------RN--AYVWTLKGRTWKPTLV 91 (372)
T ss_dssp CSSSEEEEEEEET---TEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TT---------SC--EEEEEEETTEEEEEEE
T ss_pred eCCCEEEEEeCCC---CcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CC---------Ce--EEEEECCCCeeeeeEE
Confidence 3678999999988 55 6666666778888999999999887752 11 33 3444443331 1 222
Q ss_pred ecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCce----eEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcE
Q 020756 78 PLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRP----ILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDM 150 (321)
Q Consensus 78 ~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~----~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i 150 (321)
...|...|.+++|+|+|++|++. ..++.+.+||+.... ...+ |...+.++.|+|+|++|++++ .++.|
T Consensus 92 ~~~~~~~v~~~~~~~~~~~l~~~--~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i 166 (372)
T 1k8k_C 92 ILRINRAARCVRWAPNEKKFAVG--SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS---CDFKC 166 (372)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEE--ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE---TTSCE
T ss_pred eecCCCceeEEEECCCCCEEEEE--eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc---CCCCE
Confidence 24578899999999999999885 567899999985432 2333 578899999999999999998 89999
Q ss_pred EEEEC------------------CCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCcee--E
Q 020756 151 AFWDY------------------VDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLF--F 207 (321)
Q Consensus 151 ~iwD~------------------~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l--~ 207 (321)
++||+ ..++++..+..+ .+..++|+|+|++|++++. |+.++|||+ +++.+ +
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 167 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH------DSTVCLADADKKMAVATL 240 (372)
T ss_dssp EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET------TTEEEEEEGGGTTEEEEE
T ss_pred EEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC------CCEEEEEECCCCceeEEE
Confidence 99995 367788877665 6889999999999999994 999999999 56665 4
Q ss_pred EeccCceEEEEEecCCCCCCCC
Q 020756 208 KKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 208 ~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
..+...+..+.|+|+...++..
T Consensus 241 ~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 241 ASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp ECSSCCEEEEEEEETTEEEEEE
T ss_pred ccCCCCeEEEEEecCCCEEEEE
Confidence 4466689999999998766554
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.4e-19 Score=163.45 Aligned_cols=202 Identities=13% Similarity=0.182 Sum_probs=142.6
Q ss_pred CCCceEEEEEcCCcCCCCceeee-ec-ccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC------c
Q 020756 2 GSPASVQIYACGKDLQSQPLARR-SF-FRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT------H 73 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~-~~-f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~------~ 73 (321)
+..+.|+||++.... ...+... .. +...+..+.|+|+|++|+... . | +. +.+++.... .
T Consensus 31 ~~D~~i~lw~~~~~~-~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s-~--D-------~~--v~iw~~~~~~~~~~~~ 97 (330)
T 2hes_X 31 STDRKIKLVSVKYDD-FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS-F--D-------ST--VSIWAKEESADRTFEM 97 (330)
T ss_dssp ESSSCEEEEECSSSC-CEEEEEECTTCCCSCEEEEEECTTSSEEEEEE-T--T-------SC--EEEEEC-------CCC
T ss_pred cCCCEEEEEEecCCC-eEEEEEEecCCccCCEEEEEECCCCCEEEEEe-C--C-------Cc--EEEEEcccCcCccccc
Confidence 457899999998721 1223322 11 556778999999999877642 1 1 33 333333211 1
Q ss_pred e-eeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-C----ceeEEe--CCcCeeeEEEcCCCCeEEEEccCC
Q 020756 74 E-GLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-C----RPILEL--GSGPYNTVRWNPKGKFLCLAGFGN 145 (321)
Q Consensus 74 ~-~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~----~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n 145 (321)
. ......|.+.|.+++|+|+|++|+++ ..|+.|+|||++ . ..+..+ |...+.++.|+|+|++|++++
T Consensus 98 ~~~~~~~~h~~~V~~v~~sp~g~~las~--s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s--- 172 (330)
T 2hes_X 98 DLLAIIEGHENEVKGVAWSNDGYYLATC--SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSS--- 172 (330)
T ss_dssp EEEEEEC----CEEEEEECTTSCEEEEE--ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEE---
T ss_pred eeEEEEcCCCCcEEEEEECCCCCEEEEE--eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEc---
Confidence 1 12223588999999999999999885 668999999983 2 234445 778899999999999999999
Q ss_pred CCCcEEEEECCCC--eEEEeeeCC--CeeeEEEccC--CCEEEEEEcCCceeecCcEEEEeecCc---------eeE--E
Q 020756 146 LPGDMAFWDYVDG--KQLGTTRAE--CSVTSEWSPD--GRYFMTATTAPRLQIDNGIKIFHHNGS---------LFF--K 208 (321)
Q Consensus 146 ~~g~i~iwD~~~~--~~i~~~~~~--~~~~~~wSpd--G~~l~t~~s~~rl~~d~~v~iw~~~g~---------~l~--~ 208 (321)
.|+.|++||..++ +++..+..| .+..++|+|+ +.+|++++. |+.|+||++.+. .+. .
T Consensus 173 ~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~------D~~v~iw~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 2hes_X 173 YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD------DSTVRVWKYMGDDEDDQQEWVCEAILP 246 (330)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEET------TSCEEEEEEEEECTTSCEEEEEEEECC
T ss_pred CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC------CCeEEEEEecCCCccccceeEEeeecc
Confidence 8999999998776 677778776 7889999999 778999984 999999998542 121 1
Q ss_pred -eccCceEEEEEecCCCCCCC
Q 020756 209 -KMFDKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 209 -~~~~~~~~~~w~P~~~~~~~ 228 (321)
.|...++.++|+|.. .+++
T Consensus 247 ~~h~~~v~~v~~s~~~-~l~s 266 (330)
T 2hes_X 247 DVHKRQVYNVAWGFNG-LIAS 266 (330)
T ss_dssp SCCSSCEEEEEECTTS-CEEE
T ss_pred cccccceEEEEEcCCC-EEEE
Confidence 266789999999654 4444
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.85 E-value=2.4e-19 Score=162.12 Aligned_cols=202 Identities=17% Similarity=0.264 Sum_probs=156.0
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ ++.+.....+......+.|+|+|++|+.... | | .+.+++............|
T Consensus 84 ~~d~~i~vwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d-------~--~i~iwd~~~~~~~~~~~~~ 148 (312)
T 4ery_A 84 SDDKTLKIWDVSS---GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF---D-------E--SVRIWDVKTGKCLKTLPAH 148 (312)
T ss_dssp ETTSEEEEEETTT---CCEEEEEECCSSCEEEEEECSSSSEEEEEET---T-------S--CEEEEETTTCCEEEEECCC
T ss_pred CCCCEEEEEECCC---CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC---C-------C--cEEEEECCCCEEEEEecCC
Confidence 3578999999998 6777777777778889999999998876421 1 2 2566666544333333357
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD 157 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~ 157 (321)
..+|.++.|+|+|+.|++. ..++.+.+||++. ..+..+ +...+..+.|+|+|++|++++ .++.|++||+.+
T Consensus 149 ~~~v~~~~~~~~~~~l~~~--~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~ 223 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSS--SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT---LDNTLKLWDYSK 223 (312)
T ss_dssp SSCEEEEEECTTSSEEEEE--ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE---TTTEEEEEETTT
T ss_pred CCcEEEEEEcCCCCEEEEE--eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc---CCCeEEEEECCC
Confidence 8899999999999998884 6788999999964 444554 456789999999999999998 899999999999
Q ss_pred CeEEEeeeCCC----eeeEEEc-cCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCCCCCC
Q 020756 158 GKQLGTTRAEC----SVTSEWS-PDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 158 ~~~i~~~~~~~----~~~~~wS-pdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
++++..+..+. .....|+ ++|++|++++. |+.|+|||+. ++++ +..|...+..++|+|+...+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 297 (312)
T 4ery_A 224 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE------DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 297 (312)
T ss_dssp TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT------TSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC------CCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEE
Confidence 99888887651 2234455 67889998884 9999999995 4444 44577899999999998877654
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.85 E-value=2.3e-19 Score=168.48 Aligned_cols=194 Identities=11% Similarity=0.184 Sum_probs=150.3
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ ++.+.....+...+..+.|+|+|++|+... ....+.+++.... .....+.+
T Consensus 142 ~~d~~i~iwd~~~---~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s------------~d~~v~iwd~~~~-~~~~~~~~ 205 (393)
T 1erj_A 142 AEDRLIRIWDIEN---RKIVMILQGHEQDIYSLDYFPSGDKLVSGS------------GDRTVRIWDLRTG-QCSLTLSI 205 (393)
T ss_dssp ETTSCEEEEETTT---TEEEEEECCCSSCEEEEEECTTSSEEEEEE------------TTSEEEEEETTTT-EEEEEEEC
T ss_pred cCCCeEEEEECCC---CcEEEEEccCCCCEEEEEEcCCCCEEEEec------------CCCcEEEEECCCC-eeEEEEEc
Confidence 3568899999988 677777777778889999999999886642 1123566666554 34445557
Q ss_pred CCCeEEEEECc-CCCEEEEEEccCCCeEEEEeCCCc-eeEEe---------CCcCeeeEEEcCCCCeEEEEccCCCCCcE
Q 020756 82 EGPVHDVQWSY-SGSEFAVVYGFMPASATIFNKKCR-PILEL---------GSGPYNTVRWNPKGKFLCLAGFGNLPGDM 150 (321)
Q Consensus 82 ~~~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~---------~~~~~~~~~~sPdG~~l~~~g~~n~~g~i 150 (321)
...+..++|+| +|++|++ +..++.|.+||++.. .+..+ |...+.++.|+|+|++|++++ .|+.|
T Consensus 206 ~~~v~~~~~~~~~~~~l~~--~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s---~d~~v 280 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAA--GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS---LDRSV 280 (393)
T ss_dssp SSCEEEEEECSTTCCEEEE--EETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE---TTSEE
T ss_pred CCCcEEEEEECCCCCEEEE--EcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe---CCCEE
Confidence 78899999999 8888887 467899999998643 33333 567899999999999999999 89999
Q ss_pred EEEECCCC------------eEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCc
Q 020756 151 AFWDYVDG------------KQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDK 213 (321)
Q Consensus 151 ~iwD~~~~------------~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~ 213 (321)
++||+.+. .+...+..| .+..++|+|+|++|++++. |+.++|||+. |+.+ +..|...
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~------D~~v~iwd~~~~~~~~~l~~h~~~ 354 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK------DRGVLFWDKKSGNPLLMLQGHRNS 354 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET------TSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC------CCeEEEEECCCCeEEEEECCCCCC
Confidence 99999753 344455555 6888999999999999994 9999999984 5554 5568889
Q ss_pred eEEEEEecC
Q 020756 214 LFQAEWKPV 222 (321)
Q Consensus 214 ~~~~~w~P~ 222 (321)
+..+.|+|.
T Consensus 355 v~~v~~~~~ 363 (393)
T 1erj_A 355 VISVAVANG 363 (393)
T ss_dssp EEEEEECSS
T ss_pred EEEEEecCC
Confidence 999999874
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.85 E-value=1.6e-19 Score=168.90 Aligned_cols=213 Identities=10% Similarity=0.136 Sum_probs=158.2
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecc-------c-----------------CC---
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDV-------D-----------------KT--- 54 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~-------d-----------------~t--- 54 (321)
+..+.|+||++.+ ++.+.....+...+..+.|+|+|++|+... .|. . .+
T Consensus 85 s~D~~v~iWd~~~---~~~~~~~~~h~~~v~~~~~s~~g~~las~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v 160 (380)
T 3iz6_a 85 SQDGRLIVWNALT---SQKTHAIKLHCPWVMECAFAPNGQSVACGG-LDSACSIFNLSSQADRDGNMPVSRVLTGHKGYA 160 (380)
T ss_dssp ETTSEEEEEETTT---TEEEEEEECCCTTCCCCEECTTSSEEEECC-SSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCC
T ss_pred eCCCeEEEEECCC---CccceEEecCCCCEEEEEECCCCCEEEEee-CCCcEEEEECCCCccccCCccceeeccCCCcce
Confidence 4578999999988 677777777777888999999999887532 110 0 00
Q ss_pred ---------C-cee--ecceeEEEEEcCCCceeeee-----cCCCCCeEEEEECc-CCCEEEEEEccCCCeEEEEeCC--
Q 020756 55 ---------N-QSY--YGESKLNYLTTDGTHEGLVP-----LRKEGPVHDVQWSY-SGSEFAVVYGFMPASATIFNKK-- 114 (321)
Q Consensus 55 ---------~-~s~--~g~~~l~~l~~~g~~~~~v~-----l~~~~~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~-- 114 (321)
+ ... .....+.++++......... ..|...|.++.|+| ++..|++ |..|+.|++||++
T Consensus 161 ~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s--gs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 161 SSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFIS--GSCDTTVRLWDLRIT 238 (380)
T ss_dssp CCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE--EETTSCEEEEETTTT
T ss_pred EEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEE--EECCCeEEEEECCCC
Confidence 0 000 01123444444333211111 34778999999987 7777777 5678999999985
Q ss_pred CceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC---------CeeeEEEccCCCEEEE
Q 020756 115 CRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE---------CSVTSEWSPDGRYFMT 183 (321)
Q Consensus 115 ~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~---------~~~~~~wSpdG~~l~t 183 (321)
...+..+ |...++++.|+|+|++|++++ .|+.|++||+++++++..+..+ .++.++|||+|++|++
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s---~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGS---DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEEC---SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEEc---CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEE
Confidence 3455666 788999999999999999999 9999999999999888776543 2678999999999999
Q ss_pred EEcCCceeecCcEEEEee-cCceeE------EeccCceEEEEEecCCCCCCCC
Q 020756 184 ATTAPRLQIDNGIKIFHH-NGSLFF------KKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 184 ~~s~~rl~~d~~v~iw~~-~g~~l~------~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
++. |+.++|||+ .++.+. ..|...|..+.|+|++..+++.
T Consensus 316 g~~------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 316 GYS------NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp ECT------TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred EEC------CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 985 999999998 455443 3466789999999999888765
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.85 E-value=1.6e-19 Score=163.14 Aligned_cols=204 Identities=16% Similarity=0.287 Sum_probs=150.1
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCC--CCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eee-e
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRG--STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGL-V 77 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~--G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~-v 77 (321)
+..+.|+||++.... .+.+.....+...+..+.|+++ |++|+.. +.| |. +.+++..... ... .
T Consensus 28 s~D~~v~iw~~~~~~-~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~-s~D---------~~--v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 28 SSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASC-SYD---------GK--VMIWKEENGRWSQIAV 94 (297)
T ss_dssp ETTSCEEEEEBCSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEE-ETT---------TE--EEEEEBSSSCBCCCEE
T ss_pred eCCCEEEEEecCCCC-cEEEEEEccccCCeEEEEecCCCcCCEEEEE-cCC---------CE--EEEEEcCCCceEEEEE
Confidence 357889999997521 3566666777788889999874 6666553 211 32 4445554331 122 2
Q ss_pred ecCCCCCeEEEEECcC--CCEEEEEEccCCCeEEEEeCCCc---eeEEe--CCcCeeeEEEcCC-------------CCe
Q 020756 78 PLRKEGPVHDVQWSYS--GSEFAVVYGFMPASATIFNKKCR---PILEL--GSGPYNTVRWNPK-------------GKF 137 (321)
Q Consensus 78 ~l~~~~~v~~~~wsP~--g~~l~~~~g~~~~~i~i~d~~~~---~~~~~--~~~~~~~~~~sPd-------------G~~ 137 (321)
...|...|.+++|+|+ |..|++. ..|+.+.+||++.. ....+ |...++++.|+|+ +++
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~--s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVA--SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEE--ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCE
T ss_pred eecCCCceeEEEeCcCCCCcEEEEE--ECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcce
Confidence 2347889999999998 8888874 67899999998643 12233 7889999999997 579
Q ss_pred EEEEccCCCCCcEEEEECCCCe----EEEeeeCC--CeeeEEEccCC---CEEEEEEcCCceeecCcEEEEeecCc----
Q 020756 138 LCLAGFGNLPGDMAFWDYVDGK----QLGTTRAE--CSVTSEWSPDG---RYFMTATTAPRLQIDNGIKIFHHNGS---- 204 (321)
Q Consensus 138 l~~~g~~n~~g~i~iwD~~~~~----~i~~~~~~--~~~~~~wSpdG---~~l~t~~s~~rl~~d~~v~iw~~~g~---- 204 (321)
|++++ .|+.|+|||+++++ ++..+..| .+..++|+|++ .+|++++. |+.++|||+...
T Consensus 173 l~sgs---~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~------D~~v~iWd~~~~~~~~ 243 (297)
T 2pm7_B 173 FVTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ------DRTCIIWTQDNEQGPW 243 (297)
T ss_dssp EEEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET------TSCEEEEEESSTTSCC
T ss_pred EEEEc---CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC------CCcEEEEEeCCCCCcc
Confidence 99998 89999999998764 56667766 68999999995 88999984 999999999642
Q ss_pred --eeE--EeccCceEEEEEecCCCCCCCC
Q 020756 205 --LFF--KKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 205 --~l~--~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.+. ..+...++.++|+|++..+++.
T Consensus 244 ~~~~~~~~~~~~~v~~~~~s~~g~~las~ 272 (297)
T 2pm7_B 244 KKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (297)
T ss_dssp EEEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred ceeeeecccCCCcEEEEEECCCCCEEEEE
Confidence 122 2355689999999999887765
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.85 E-value=1.8e-19 Score=179.07 Aligned_cols=205 Identities=19% Similarity=0.264 Sum_probs=153.4
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+.. .........+...+..+.|+|+|+.|+.... +.+.. + .+++++. +. .......|.
T Consensus 79 ~d~~v~lWd~~~~~-~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~-~~~~~-----~--~v~~wd~-~~-~~~~l~gh~ 147 (611)
T 1nr0_A 79 VHGNVRIWDTTQTT-HILKTTIPVFSGPVKDISWDSESKRIAAVGE-GRERF-----G--HVFLFDT-GT-SNGNLTGQA 147 (611)
T ss_dssp TTSEEEEEESSSTT-CCEEEEEECSSSCEEEEEECTTSCEEEEEEC-CSSCS-----E--EEEETTT-CC-BCBCCCCCS
T ss_pred CCCCEEEeECCCCc-ceeeEeecccCCceEEEEECCCCCEEEEEEC-CCCce-----e--EEEEeeC-CC-CcceecCCC
Confidence 57899999997621 2223344556778889999999999887531 11111 1 3455442 22 112223588
Q ss_pred CCeEEEEECcCCCE-EEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 83 GPVHDVQWSYSGSE-FAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 83 ~~v~~~~wsP~g~~-l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
+.|.+++|+|++.. |++ +..|+.+++||... +.+..+ |...+++++|+|||++|++++ .|+.|++||+.++
T Consensus 148 ~~v~~v~f~p~~~~~l~s--~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s---~D~~i~lwd~~~g 222 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIIS--GSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG---GDGTIVLYNGVDG 222 (611)
T ss_dssp SCEEEEEECSSSSCEEEE--EETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTC
T ss_pred CCceEEEECCCCCeEEEE--EeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE---CCCcEEEEECCCC
Confidence 99999999999974 665 56789999999854 445555 788999999999999999999 9999999999999
Q ss_pred eEEEeee-------CC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee----------------------
Q 020756 159 KQLGTTR-------AE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF---------------------- 206 (321)
Q Consensus 159 ~~i~~~~-------~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l---------------------- 206 (321)
+++..+. .| .+..++|+|||++|++++. |+.++|||+. ++++
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~------D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA------DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC------CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 8887773 34 7889999999999999994 9999999984 3322
Q ss_pred -----------------------EEeccCceEEEEEecCCCCCCCC
Q 020756 207 -----------------------FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 207 -----------------------~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
...|...+..++|+|++..+++.
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~ 342 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSA 342 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 12356689999999998887765
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.85 E-value=1.1e-19 Score=167.89 Aligned_cols=177 Identities=17% Similarity=0.313 Sum_probs=137.1
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce---eeeecCCCCCeEEEEECcCCCEEEEEEccCCC
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE---GLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPA 106 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~---~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~ 106 (321)
....+.|||+|++|+... . | +. +.+++..+... ..+...|.+.|.+++|+|+|++|++. ..|+
T Consensus 18 ~v~~l~~sp~g~~las~~-~--D-------~~--i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~--s~D~ 83 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCG-G--D-------RR--IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA--SFDA 83 (345)
T ss_dssp CEEEEEECTTSSCEEEEE-T--T-------SC--EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE--ETTS
T ss_pred cEEEEEECCCCCEEEEEc-C--C-------Ce--EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE--ECCC
Confidence 566899999999887652 1 1 33 33344433311 11223588999999999999999884 6789
Q ss_pred eEEEEeCCCc---eeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC---eEEEeeeCC--CeeeEEEcc
Q 020756 107 SATIFNKKCR---PILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG---KQLGTTRAE--CSVTSEWSP 176 (321)
Q Consensus 107 ~i~i~d~~~~---~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~---~~i~~~~~~--~~~~~~wSp 176 (321)
.+.|||+... .+..+ |...+.+++|+|+|++|++++ .|+.|++||+.++ +++..+..| .+..++|+|
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s---~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS---RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE---CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 9999998543 34455 788999999999999999999 8999999999865 455666655 688999999
Q ss_pred CCCEEEEEEcCCceeecCcEEEEeecCce-e----EEeccCceEEEEEecCCCCCCCC
Q 020756 177 DGRYFMTATTAPRLQIDNGIKIFHHNGSL-F----FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 177 dG~~l~t~~s~~rl~~d~~v~iw~~~g~~-l----~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+|++|++++. |+.++||+..... . ...|...|+.++|+|++..+++.
T Consensus 161 ~~~~l~s~s~------d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 161 SQELLASASY------DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp SSSCEEEEET------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEeC------CCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 9999999994 9999999986432 1 44577899999999998877765
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.85 E-value=4.3e-19 Score=164.57 Aligned_cols=204 Identities=8% Similarity=0.109 Sum_probs=156.0
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC----ceeee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT----HEGLV 77 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~----~~~~v 77 (321)
|.++.|+||+... +...............+.|+|+|..|+... .| +...+|.+..... .....
T Consensus 83 s~Dg~v~vWd~~~---~~~~~~~~~~~~~v~~~~~sp~g~~lasg~---~d-------~~i~v~~~~~~~~~~~~~~~~~ 149 (354)
T 2pbi_B 83 SQDGKVIVWDSFT---TNKEHAVTMPCTWVMACAYAPSGCAIACGG---LD-------NKCSVYPLTFDKNENMAAKKKS 149 (354)
T ss_dssp ETTSEEEEEETTT---CCEEEEEECSSSCCCEEEECTTSSEEEEES---TT-------SEEEEEECCCCTTCCSGGGCEE
T ss_pred eCCCeEEEEECCC---CCcceEEecCCCCEEEEEECCCCCEEEEee---CC-------CCEEEEEEecccccccccccee
Confidence 4678999999988 666667777777788999999999987641 11 2223444332211 01111
Q ss_pred ecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEe--CCcCeeeEEEcC--CCCeEEEEccCCCCCcEEE
Q 020756 78 PLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILEL--GSGPYNTVRWNP--KGKFLCLAGFGNLPGDMAF 152 (321)
Q Consensus 78 ~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~--~~~~~~~~~~sP--dG~~l~~~g~~n~~g~i~i 152 (321)
...|.+.|.++.|+|++..|+++ ..|+.|.+||+. +..+..+ |...+.++.|+| +|++|++++ .|+.|++
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~--s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs---~Dg~v~~ 224 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTA--SGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG---CDKKAMV 224 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEE--ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE---TTSCEEE
T ss_pred eeccCCcEEEEEEeCCCCEEEEE--eCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe---CCCeEEE
Confidence 12478999999999999999885 568999999995 4455666 778899999988 578999999 8999999
Q ss_pred EECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-eeEEe----ccCceEEEEEecCCCC
Q 020756 153 WDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LFFKK----MFDKLFQAEWKPVSPD 225 (321)
Q Consensus 153 wD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l~~~----~~~~~~~~~w~P~~~~ 225 (321)
||+++++++..+..| .+..++|+|+|.+|++++. |+.++|||+... .+... ....+..+.|+|++..
T Consensus 225 wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~------D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 225 WDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSD------DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL 298 (354)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred EECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC------CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE
Confidence 999999999888776 7889999999999999994 999999999643 33222 1236789999999887
Q ss_pred CCCC
Q 020756 226 KFGD 229 (321)
Q Consensus 226 ~~~~ 229 (321)
++..
T Consensus 299 l~~g 302 (354)
T 2pbi_B 299 LFAG 302 (354)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7754
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.85 E-value=9.9e-20 Score=180.91 Aligned_cols=201 Identities=17% Similarity=0.168 Sum_probs=154.9
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCC-Cceee-eecCC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDG-THEGL-VPLRK 81 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g-~~~~~-v~l~~ 81 (321)
...|+||++.+ ++.+....-+...+..+.|||+|++|+.... | |. +.+++... ..... ....|
T Consensus 38 ~~~v~l~~~~~---~~~~~~~~~h~~~v~~~~~spdg~~lasg~~---d-------~~--v~lWd~~~~~~~~~~~~~~~ 102 (611)
T 1nr0_A 38 GTSVYTVPVGS---LTDTEIYTEHSHQTTVAKTSPSGYYCASGDV---H-------GN--VRIWDTTQTTHILKTTIPVF 102 (611)
T ss_dssp TTEEEEEETTC---SSCCEEECCCSSCEEEEEECTTSSEEEEEET---T-------SE--EEEEESSSTTCCEEEEEECS
T ss_pred CCEEEEecCCC---cccCeEecCCCCceEEEEECCCCcEEEEEeC---C-------CC--EEEeECCCCcceeeEeeccc
Confidence 35799999987 5666666667778889999999999877521 1 22 45555532 21122 22247
Q ss_pred CCCeEEEEECcCCCEEEEEEccCC--CeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCe-EEEEccCCCCCcEEEEECC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMP--ASATIFNKKCRPILEL--GSGPYNTVRWNPKGKF-LCLAGFGNLPGDMAFWDYV 156 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~--~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~-l~~~g~~n~~g~i~iwD~~ 156 (321)
.++|.+++|+|+|+.|+++....+ +.+.+||.. .....+ |...++++.|+|++.+ |++++ .|+.|++||..
T Consensus 103 ~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s---~D~~v~lwd~~ 178 (611)
T 1nr0_A 103 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFRIISGS---DDNTVAIFEGP 178 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCEEEEEE---TTSCEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeEEEEEe---CCCeEEEEECC
Confidence 899999999999999998743332 478888853 333344 7889999999999984 88888 89999999999
Q ss_pred CCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEE---------eccCceEEEEEecCCC
Q 020756 157 DGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFK---------KMFDKLFQAEWKPVSP 224 (321)
Q Consensus 157 ~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~---------~~~~~~~~~~w~P~~~ 224 (321)
+++++..+..| .+.+++|+|||++|++++. |+.++|||+ +|+.+.. .|...++.+.|+|++.
T Consensus 179 ~~~~~~~l~~H~~~V~~v~fspdg~~las~s~------D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 179 PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG------DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp TBEEEEEECCCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred CCeEeeeeccccCceEEEEECCCCCEEEEEEC------CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence 99998888877 6899999999999999994 999999997 4555422 4677999999999998
Q ss_pred CCCCC
Q 020756 225 DKFGD 229 (321)
Q Consensus 225 ~~~~~ 229 (321)
.+++.
T Consensus 253 ~l~s~ 257 (611)
T 1nr0_A 253 KIASA 257 (611)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88765
No 34
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.85 E-value=1.1e-19 Score=169.64 Aligned_cols=208 Identities=13% Similarity=0.056 Sum_probs=145.1
Q ss_pred CCceEEEEEcCCcCC-CCceeeeecccC-----ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceee
Q 020756 3 SPASVQIYACGKDLQ-SQPLARRSFFRC-----STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGL 76 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~-~~~i~~~~~f~~-----~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~ 76 (321)
....||+|++..... ...+....+... ....+.|||||++|++.+.. . ...+.+++.... ...
T Consensus 102 ~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~-~---------d~~i~iwd~~~~-~~~ 170 (365)
T 4h5i_A 102 GNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSK-V---------PAIMRIIDPSDL-TEK 170 (365)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESC-S---------SCEEEEEETTTT-EEE
T ss_pred CCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECC-C---------CCEEEEeECCCC-cEE
Confidence 467899999876310 011222223221 13358999999999875311 1 123566676655 445
Q ss_pred eecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeC-CCceeEEe----CCcCeeeEEEcCCCCeEEEEccCCC-CCcE
Q 020756 77 VPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNK-KCRPILEL----GSGPYNTVRWNPKGKFLCLAGFGNL-PGDM 150 (321)
Q Consensus 77 v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~-~~~~~~~~----~~~~~~~~~~sPdG~~l~~~g~~n~-~g~i 150 (321)
..+.|.+.|.+++|+|||++|+++ ..+ .+.+|+. .+..+... |...+.++.|+|+|++|++++..+. ...+
T Consensus 171 ~~~~~~~~V~~v~fspdg~~l~s~--s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 171 FEIETRGEVKDLHFSTDGKVVAYI--TGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEE--CSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred EEeCCCCceEEEEEccCCceEEec--cce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 556788899999999999999885 334 4555554 55544332 5677999999999999999873221 1268
Q ss_pred EEEECCCCeE----EEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEE---eccCceEEEEEe
Q 020756 151 AFWDYVDGKQ----LGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFK---KMFDKLFQAEWK 220 (321)
Q Consensus 151 ~iwD~~~~~~----i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~---~~~~~~~~~~w~ 220 (321)
.+||+..... ...+..+ .+++++|||||++||+++. |+.|+|||+ +++++.. .|...|+.++|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~------D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN------DNSIALVKLKDLSMSKIFKQAHSFAITEVTIS 321 (365)
T ss_dssp EEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET------TSCEEEEETTTTEEEEEETTSSSSCEEEEEEC
T ss_pred eecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC------CCEEEEEECCCCcEEEEecCcccCCEEEEEEC
Confidence 8899876643 2344444 6899999999999999995 999999999 4666533 477899999999
Q ss_pred cCCCCCCCCc
Q 020756 221 PVSPDKFGDI 230 (321)
Q Consensus 221 P~~~~~~~~~ 230 (321)
|++..+++..
T Consensus 322 pdg~~laS~S 331 (365)
T 4h5i_A 322 PDSTYVASVS 331 (365)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999888763
No 35
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.85 E-value=7.7e-20 Score=169.53 Aligned_cols=180 Identities=12% Similarity=0.131 Sum_probs=132.3
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-eeeec-
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE-GLVPL- 79 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~-~~v~l- 79 (321)
+..+.|+||++.+ ++++.....+...+..+.|+++|..+++.++.| |. +.++++..... ..+..
T Consensus 146 s~d~~i~iwd~~~---~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---------~~--v~iwd~~~~~~~~~~~~~ 211 (344)
T 4gqb_B 146 SKDICIKVWDLAQ---QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED---------NR--ILLWDTRCPKPASQIGCS 211 (344)
T ss_dssp ETTSCEEEEETTT---TEEEEEECCCSSCEEEEEECSSCTTEEEEEETT---------SC--EEEEETTSSSCEEECC--
T ss_pred eCCCeEEEEECCC---CcEEEEEcCcCCceEEEEecCCCCCceeeeccc---------cc--cccccccccceeeeeecc
Confidence 3578999999998 788888777788889999999998877654322 22 45555543322 22221
Q ss_pred CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEe--CCcCeeeEEEcCCC-CeEEEEccCCCCCcEEEEEC
Q 020756 80 RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILEL--GSGPYNTVRWNPKG-KFLCLAGFGNLPGDMAFWDY 155 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~--~~~~~~~~~~sPdG-~~l~~~g~~n~~g~i~iwD~ 155 (321)
.+...+.+++|+|++..++++ |..++.|+|||++ ++.+..+ |...++++.|+|+| ++|++++ .|+.|+|||+
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~s-g~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs---~D~~i~vwd~ 287 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVF-GDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS---EDCSLAVLDS 287 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEE-EETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE---TTSCEEEECT
T ss_pred eeeccceeeeecCCCCcceEE-eccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe---CCCeEEEEEC
Confidence 245678999999976544433 5778999999995 4556666 78899999999998 5788888 8999999999
Q ss_pred CCCeEEEeeeCC--CeeeEEEccCCCEEE-EEEcCCceeecCcEEEEeecCcee
Q 020756 156 VDGKQLGTTRAE--CSVTSEWSPDGRYFM-TATTAPRLQIDNGIKIFHHNGSLF 206 (321)
Q Consensus 156 ~~~~~i~~~~~~--~~~~~~wSpdG~~l~-t~~s~~rl~~d~~v~iw~~~g~~l 206 (321)
.+++++.. .+| .+++++|||+|++|+ +++ .|+.|++|++..+.+
T Consensus 288 ~~~~~~~~-~~H~~~V~~v~~sp~~~~llas~s------~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 288 SLSELFRS-QAHRDFVRDATWSPLNHSLLTTVG------WDHQVVHHVVPTEPL 334 (344)
T ss_dssp TCCEEEEE-CCCSSCEEEEEECSSSTTEEEEEE------TTSCEEEEECCC---
T ss_pred CCCcEEEE-cCCCCCEEEEEEeCCCCeEEEEEc------CCCeEEEEECCCCCC
Confidence 99887654 444 789999999998654 666 499999999865443
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.84 E-value=1.3e-19 Score=169.81 Aligned_cols=200 Identities=10% Similarity=0.061 Sum_probs=148.5
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+ ++........ .......|+++|++|++... + | .+.+++............|.
T Consensus 76 ~d~~v~i~d~~~---~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~-d---------g--~i~iwd~~~~~~~~~~~~h~ 139 (420)
T 3vl1_A 76 LDGHDFLFNTII---RDGSKMLKRA-DYTAVDTAKLQMRRFILGTT-E---------G--DIKVLDSNFNLQREIDQAHV 139 (420)
T ss_dssp ETTEEEEEECCS---EETTTTSCSC-CEEEEEEECSSSCEEEEEET-T---------S--CEEEECTTSCEEEEETTSSS
T ss_pred cCCcEEEEEecc---cceeeEEecC-CceEEEEEecCCCEEEEEEC-C---------C--CEEEEeCCCcceeeeccccc
Confidence 367899999988 3333222221 23344478999998877521 1 2 25566665543333323689
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK 159 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~ 159 (321)
+.|.+++|+|+|+.|++. ..++.|.+||+. +..+..+ |...+.++.|+|+|++|++++ .++.|++||+++++
T Consensus 140 ~~v~~~~~~~~~~~l~s~--s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISS--SQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS---LDGTIRLWECGTGT 214 (420)
T ss_dssp SCEEEEEECTTSSEEEEE--ETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE---TTSCEEEEETTTTE
T ss_pred CccEEEEECCCCCEEEEE--eCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc---CCCcEEEeECCCCc
Confidence 999999999999988884 668999999995 4455555 788999999999999999999 89999999999998
Q ss_pred EEEeeeC--------------------------CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEE---e
Q 020756 160 QLGTTRA--------------------------ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFK---K 209 (321)
Q Consensus 160 ~i~~~~~--------------------------~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~---~ 209 (321)
.+..+.. ..+..++|+|+|++|++++. |+.++|||+. ++.+.. .
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV------SGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET------TSCEEEEETTTCCEEEEECCT
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC------CCeEEEEECCCCceeEEcccc
Confidence 8888764 23445677999999999995 9999999994 444433 2
Q ss_pred ccCceEEEEEecCCC-CCCCC
Q 020756 210 MFDKLFQAEWKPVSP-DKFGD 229 (321)
Q Consensus 210 ~~~~~~~~~w~P~~~-~~~~~ 229 (321)
+...+..+.|+|+.. .+++.
T Consensus 289 ~~~~v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 289 FTCSCNSLTVDGNNANYIYAG 309 (420)
T ss_dssp TSSCEEEEEECSSCTTEEEEE
T ss_pred cCCCceeEEEeCCCCCEEEEE
Confidence 556899999999988 55543
No 37
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.84 E-value=1.3e-18 Score=157.22 Aligned_cols=179 Identities=18% Similarity=0.271 Sum_probs=141.9
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.. ++.+.....+......+.|+|+|++|+.... ...+.+++............|
T Consensus 42 ~~dg~i~iw~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------------d~~i~vwd~~~~~~~~~~~~~ 106 (312)
T 4ery_A 42 SADKLIKIWGAYD---GKFEKTISGHKLGISDVAWSSDSNLLVSASD------------DKTLKIWDVSSGKCLKTLKGH 106 (312)
T ss_dssp ETTSCEEEEETTT---CCEEEEECCCSSCEEEEEECTTSSEEEEEET------------TSEEEEEETTTCCEEEEEECC
T ss_pred eCCCeEEEEeCCC---cccchhhccCCCceEEEEEcCCCCEEEEECC------------CCEEEEEECCCCcEEEEEcCC
Confidence 3568899999988 6777777777788889999999998877521 113555666544333333357
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
...|.++.|+|+++.|++. ..++.+.+||++. ..+..+ |...+.++.|+|+|++|++++ .++.|++||+.++
T Consensus 107 ~~~v~~~~~~~~~~~l~s~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~ 181 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSG--SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS---YDGLCRIWDTASG 181 (312)
T ss_dssp SSCEEEEEECSSSSEEEEE--ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTC
T ss_pred CCCEEEEEEcCCCCEEEEE--eCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEEECCCC
Confidence 8899999999999998884 6788999999964 455555 678899999999999999999 8999999999999
Q ss_pred eEEEeeeCC---CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee
Q 020756 159 KQLGTTRAE---CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF 206 (321)
Q Consensus 159 ~~i~~~~~~---~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l 206 (321)
+.+..+... .+..++|+|+|++|++++. |+.++|||+. ++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 182 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL------DNTLKLWDYSKGKCL 227 (312)
T ss_dssp CEEEEECCSSCCCEEEEEECTTSSEEEEEET------TTEEEEEETTTTEEE
T ss_pred ceeeEEeccCCCceEEEEECCCCCEEEEEcC------CCeEEEEECCCCcEE
Confidence 877766432 6778999999999999994 9999999995 4444
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.84 E-value=3.6e-19 Score=179.14 Aligned_cols=201 Identities=16% Similarity=0.207 Sum_probs=154.1
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee---
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP--- 78 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~--- 78 (321)
+..+.|+||++.+ +..+.....+...+..+.|+|+|+.|+... . | + .+.+++..+.....+.
T Consensus 449 s~Dg~v~vwd~~~---~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~--D-------~--~i~iwd~~~~~~~~~~~~~ 513 (694)
T 3dm0_A 449 SWDGELRLWDLAA---GVSTRRFVGHTKDVLSVAFSLDNRQIVSAS-R--D-------R--TIKLWNTLGECKYTISEGG 513 (694)
T ss_dssp ETTSEEEEEETTT---TEEEEEEECCSSCEEEEEECTTSSCEEEEE-T--T-------S--CEEEECTTSCEEEEECSST
T ss_pred eCCCcEEEEECCC---CcceeEEeCCCCCEEEEEEeCCCCEEEEEe-C--C-------C--EEEEEECCCCcceeeccCC
Confidence 3578999999998 677777777788899999999999987642 1 1 2 2445555443222221
Q ss_pred cCCCCCeEEEEECcCCC--EEEEEEccCCCeEEEEeCCCc-eeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEE
Q 020756 79 LRKEGPVHDVQWSYSGS--EFAVVYGFMPASATIFNKKCR-PILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFW 153 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~--~l~~~~g~~~~~i~i~d~~~~-~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iw 153 (321)
..|...|.+++|+|++. .|++ +..|+.|++||++.. .+..+ |...+.++.|+|+|++|++++ .|+.|+||
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s--~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~---~Dg~i~iw 588 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVS--ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG---KDGVVLLW 588 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEE--EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSBCEEE
T ss_pred CCCCCcEEEEEEeCCCCcceEEE--EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe---CCCeEEEE
Confidence 13778899999999984 4444 577899999999654 44555 788999999999999999999 89999999
Q ss_pred ECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee-EEec---------------------
Q 020756 154 DYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF-FKKM--------------------- 210 (321)
Q Consensus 154 D~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l-~~~~--------------------- 210 (321)
|+.+++++..+..+ .+..++|||++.+|+++. +++|+|||+....+ ....
T Consensus 589 d~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (694)
T 3dm0_A 589 DLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-------EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRK 661 (694)
T ss_dssp ETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-------TTEEEEEETTTTEEEEEECCCCC----------------C
T ss_pred ECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-------CCCEEEEECCCCCChhhhccccccccccccccccccCCce
Confidence 99999988887765 788899999999988877 88899999965433 2211
Q ss_pred cCceEEEEEecCCCCCCCC
Q 020756 211 FDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 211 ~~~~~~~~w~P~~~~~~~~ 229 (321)
...+..+.|+|++..+++.
T Consensus 662 ~~~~~~l~~spdg~~l~sg 680 (694)
T 3dm0_A 662 VIYCTSLNWSADGSTLFSG 680 (694)
T ss_dssp CCCEEEEEECTTSSEEEEE
T ss_pred eEEeeeEEEcCCCCEEEEE
Confidence 1136789999999888765
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.84 E-value=2.5e-19 Score=164.59 Aligned_cols=177 Identities=10% Similarity=0.093 Sum_probs=137.0
Q ss_pred CCCceEEEEEcCCcCCCCceeeee--cccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc--eeee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRS--FFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH--EGLV 77 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~--~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~--~~~v 77 (321)
+..+.|+||++.. ++...... -+......+.|+|+|++|++... . |...+|.+...... ...+
T Consensus 71 ~~dg~i~vwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d-----~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 71 GTDRNAYVWTLKG---RTWKPTLVILRINRAARCVRWAPNEKKFAVGSG-----S-----RVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp ETTSCEEEEEEET---TEEEEEEECCCCSSCEEEEEECTTSSEEEEEET-----T-----SSEEEEEEETTTTEEEEEEE
T ss_pred cCCCeEEEEECCC---CeeeeeEEeecCCCceeEEEECCCCCEEEEEeC-----C-----CEEEEEEecCCCcceeeeee
Confidence 3568899999977 44433333 24567889999999998877531 1 33345555443321 1233
Q ss_pred ecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-------------------CceeEEe--CCcCeeeEEEcCCCC
Q 020756 78 PLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-------------------CRPILEL--GSGPYNTVRWNPKGK 136 (321)
Q Consensus 78 ~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-------------------~~~~~~~--~~~~~~~~~~sPdG~ 136 (321)
...|...|.+++|+|+++.|++. ..++.+.+||+. +..+..+ |...+.++.|+|+|+
T Consensus 138 ~~~~~~~i~~~~~~~~~~~l~~~--~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSVLLAAG--SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 215 (372)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEE--ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred ecccCCCeeEEEEcCCCCEEEEE--cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence 34578999999999999998884 668899999963 4456666 677899999999999
Q ss_pred eEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 137 FLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 137 ~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
+|++++ .++.|++||+++++++..+..+ .+..++|+|+|++|+++. |+.++||++..
T Consensus 216 ~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------d~~i~i~~~~~ 274 (372)
T 1k8k_C 216 RVAWVS---HDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-------DCFPVLFTYDS 274 (372)
T ss_dssp EEEEEE---TTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET-------TSSCEEEEEET
T ss_pred EEEEEe---CCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEe-------CCeEEEEEccC
Confidence 999999 8999999999999988888776 788999999999888874 99999999965
No 40
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.84 E-value=7.7e-19 Score=160.48 Aligned_cols=203 Identities=16% Similarity=0.212 Sum_probs=157.4
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ ++.+.....+......+.|+|+|++|++... | | .+.+++.... .....+.+
T Consensus 51 ~~dg~i~vwd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d---------g--~i~iwd~~~~-~~~~~~~~ 114 (369)
T 3zwl_B 51 SKDSSASVWYSLN---GERLGTLDGHTGTIWSIDVDCFTKYCVTGSA-D---------Y--SIKLWDVSNG-QCVATWKS 114 (369)
T ss_dssp ESSSCEEEEETTT---CCEEEEECCCSSCEEEEEECTTSSEEEEEET-T---------T--EEEEEETTTC-CEEEEEEC
T ss_pred eCCCEEEEEeCCC---chhhhhhhhcCCcEEEEEEcCCCCEEEEEeC-C---------C--eEEEEECCCC-cEEEEeec
Confidence 3568899999998 7888877777888899999999998876521 1 2 3566666554 23333447
Q ss_pred CCCeEEEEECcCCCEEEEEEcc---CCCeEEEEeCCCc------------eeEEe--CCc--CeeeEEEcCCCCeEEEEc
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGF---MPASATIFNKKCR------------PILEL--GSG--PYNTVRWNPKGKFLCLAG 142 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~---~~~~i~i~d~~~~------------~~~~~--~~~--~~~~~~~sPdG~~l~~~g 142 (321)
..+|.+++|+|+++.|+++... .++.+.+||+... .+..+ +.. .+.++.|+|+|++|++++
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 8899999999999999986321 1289999998422 22222 333 899999999999999998
Q ss_pred cCCCCCcEEEEECCC-CeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEE-eccCceEEE
Q 020756 143 FGNLPGDMAFWDYVD-GKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFK-KMFDKLFQA 217 (321)
Q Consensus 143 ~~n~~g~i~iwD~~~-~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~-~~~~~~~~~ 217 (321)
.+|.|.+||+.+ ++.+..+..+ .+..++|+|||++|++++. |+.++|||+. ++.+.. .+...+..+
T Consensus 195 ---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~~~~~ 265 (369)
T 3zwl_B 195 ---KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR------DTNSFLVDVSTLQVLKKYETDCPLNTA 265 (369)
T ss_dssp ---TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred ---CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC------CceEEEEECCCCceeeeecCCCCceeE
Confidence 889999999998 6888877765 7889999999999999984 9999999995 455433 355689999
Q ss_pred EEecCCCCCCCC
Q 020756 218 EWKPVSPDKFGD 229 (321)
Q Consensus 218 ~w~P~~~~~~~~ 229 (321)
.|+|+...++..
T Consensus 266 ~~~~~~~~l~~~ 277 (369)
T 3zwl_B 266 VITPLKEFIILG 277 (369)
T ss_dssp EECSSSSEEEEE
T ss_pred EecCCCceEEEe
Confidence 999998877754
No 41
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=7.3e-19 Score=166.87 Aligned_cols=199 Identities=11% Similarity=0.109 Sum_probs=148.8
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGP 84 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~ 84 (321)
..|+||++.+ ++.. ....+......+.|||+|+.|++....+ |...||.++..+.....+ ..+...
T Consensus 203 ~~i~~~d~~t---g~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~---------g~~~i~~~d~~~~~~~~l-~~~~~~ 268 (415)
T 2hqs_A 203 SALVIQTLAN---GAVR-QVASFPRHNGAPAFSPDGSKLAFALSKT---------GSLNLYVMDLASGQIRQV-TDGRSN 268 (415)
T ss_dssp CEEEEEETTT---CCEE-EEECCSSCEEEEEECTTSSEEEEEECTT---------SSCEEEEEETTTCCEEEC-CCCSSC
T ss_pred cEEEEEECCC---CcEE-EeecCCCcccCEEEcCCCCEEEEEEecC---------CCceEEEEECCCCCEEeC-cCCCCc
Confidence 4899999987 5543 4444566778999999999998764321 344688898876543333 346778
Q ss_pred eEEEEECcCCCEEEEEEcc-CCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEE
Q 020756 85 VHDVQWSYSGSEFAVVYGF-MPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQL 161 (321)
Q Consensus 85 v~~~~wsP~g~~l~~~~g~-~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i 161 (321)
+.+++|+|||+.|++.... ....|.+||+.+.....+ +...+..+.|||||++|++++..+.+..|++||+.+++..
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 9999999999999987432 122788889876655554 5567788999999999999874333468999999988765
Q ss_pred EeeeCCCeeeEEEccCCCEEEEEEcCCceeecC---cEEEEeecCcee--EEeccCceEEEEEecCC
Q 020756 162 GTTRAECSVTSEWSPDGRYFMTATTAPRLQIDN---GIKIFHHNGSLF--FKKMFDKLFQAEWKPVS 223 (321)
Q Consensus 162 ~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~---~v~iw~~~g~~l--~~~~~~~~~~~~w~P~~ 223 (321)
.......+..++|+|||++|++++. ++ .|++||++|+.+ ...+...+.+++|+|..
T Consensus 349 ~l~~~~~~~~~~~spdg~~l~~~s~------~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 349 VLSSTFLDETPSLAPNGTMVIYSSS------QGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp ECCCSSSCEEEEECTTSSEEEEEEE------ETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred EecCCCCcCCeEEcCCCCEEEEEEc------CCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence 4433346788999999999999885 55 699999988766 33466789999999964
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.84 E-value=4e-19 Score=178.74 Aligned_cols=205 Identities=12% Similarity=0.096 Sum_probs=157.6
Q ss_pred CCCceEEEEEcCCcCC--CCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec
Q 020756 2 GSPASVQIYACGKDLQ--SQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL 79 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~--~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l 79 (321)
+.++.|+||++..... +........+...+..+.|+|+|++|+... . ...|.++++..........
T Consensus 402 s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs-~-----------Dg~v~vwd~~~~~~~~~~~ 469 (694)
T 3dm0_A 402 SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS-W-----------DGELRLWDLAAGVSTRRFV 469 (694)
T ss_dssp ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE-T-----------TSEEEEEETTTTEEEEEEE
T ss_pred eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe-C-----------CCcEEEEECCCCcceeEEe
Confidence 4578999999987321 112334445667788999999999887642 1 1235666665554444445
Q ss_pred CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe------CCcCeeeEEEcCCC--CeEEEEccCCCCCcEE
Q 020756 80 RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL------GSGPYNTVRWNPKG--KFLCLAGFGNLPGDMA 151 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~------~~~~~~~~~~sPdG--~~l~~~g~~n~~g~i~ 151 (321)
.|.+.|.+++|+|+|+.|+++ ..|+.|+|||..+.....+ |...+.++.|+|++ .+|++++ .|+.|+
T Consensus 470 ~h~~~v~~~~~s~~~~~l~s~--s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s---~d~~v~ 544 (694)
T 3dm0_A 470 GHTKDVLSVAFSLDNRQIVSA--SRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS---WDKTVK 544 (694)
T ss_dssp CCSSCEEEEEECTTSSCEEEE--ETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE---TTSCEE
T ss_pred CCCCCEEEEEEeCCCCEEEEE--eCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEe---CCCeEE
Confidence 789999999999999999885 6789999999976655444 45679999999997 5788888 899999
Q ss_pred EEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe-ccCceEEEEEecCCCCCC
Q 020756 152 FWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK-MFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 152 iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~-~~~~~~~~~w~P~~~~~~ 227 (321)
+||+.+++++..+..| .+++++|||||++|++++. |+.|+|||+ +++.++.. +...+..++|+|+...+.
T Consensus 545 vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~------Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 545 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK------DGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET------TSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC------CCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEE
Confidence 9999999988888876 6889999999999999995 999999999 45555433 345789999999876555
Q ss_pred CC
Q 020756 228 GD 229 (321)
Q Consensus 228 ~~ 229 (321)
..
T Consensus 619 ~~ 620 (694)
T 3dm0_A 619 AA 620 (694)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.5e-18 Score=158.55 Aligned_cols=208 Identities=11% Similarity=0.135 Sum_probs=158.1
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-------
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE------- 74 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~------- 74 (321)
+..+.|+||++.+ ++.+.... +......+.|+|+|+++++.... .. ...|...+|.+.......
T Consensus 93 ~~dg~i~iwd~~~---~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~-~~----~~~g~i~~~d~~~~~~~~~~~~~~~ 163 (369)
T 3zwl_B 93 SADYSIKLWDVSN---GQCVATWK-SPVPVKRVEFSPCGNYFLAILDN-VM----KNPGSINIYEIERDSATHELTKVSE 163 (369)
T ss_dssp ETTTEEEEEETTT---CCEEEEEE-CSSCEEEEEECTTSSEEEEEECC-BT----TBCCEEEEEEEEECTTTCCEEEECS
T ss_pred eCCCeEEEEECCC---CcEEEEee-cCCCeEEEEEccCCCEEEEecCC-cc----CCCCEEEEEEecCCccceeeccccc
Confidence 3578999999998 67776666 67788899999999998876421 00 011333344444332111
Q ss_pred --eeeecCCCC--CeEEEEECcCCCEEEEEEccCCCeEEEEeCCC--ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCC
Q 020756 75 --GLVPLRKEG--PVHDVQWSYSGSEFAVVYGFMPASATIFNKKC--RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNL 146 (321)
Q Consensus 75 --~~v~l~~~~--~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~--~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~ 146 (321)
......+.+ .+.+++|+|+|+.|++. ..++.|.+||++. ..+..+ +...+.++.|+|+|++|++++ .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~ 238 (369)
T 3zwl_B 164 EPIHKIITHEGLDAATVAGWSTKGKYIIAG--HKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSS---R 238 (369)
T ss_dssp SCSEEEECCTTCCCEEEEEECGGGCEEEEE--ETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE---T
T ss_pred ceeeeccCCcCccceeEEEEcCCCCEEEEE--cCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEec---C
Confidence 111112344 89999999999998884 6689999999975 455555 788999999999999999998 8
Q ss_pred CCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecC--------------cEEEEeec-Ccee--EE
Q 020756 147 PGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDN--------------GIKIFHHN-GSLF--FK 208 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~--------------~v~iw~~~-g~~l--~~ 208 (321)
++.|.+||+.+++.+..+... .+..+.|+|+|+++++++. ++ .+++||+. ++.+ ..
T Consensus 239 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 312 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGG------QEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ 312 (369)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEEC------CC-------------CEEEEEETTTCCEEEEEE
T ss_pred CceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeec------CCCceEEEEecCCCcceeEEEecCCCcchhhee
Confidence 999999999999888888765 7889999999999999985 44 79999984 4544 44
Q ss_pred eccCceEEEEEecCCCCCCCC
Q 020756 209 KMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 209 ~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.+...+..+.|+|+...+++.
T Consensus 313 ~~~~~v~~~~~s~~~~~l~s~ 333 (369)
T 3zwl_B 313 GHFGPLNTVAISPQGTSYASG 333 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEE
T ss_pred cccCcEEEEEECCCCCEEEEE
Confidence 577899999999998877765
No 44
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.84 E-value=1.4e-19 Score=168.12 Aligned_cols=177 Identities=15% Similarity=0.144 Sum_probs=135.6
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-eeee-c
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE-GLVP-L 79 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~-~~v~-l 79 (321)
+..+.|+||++.+ ++.+.....+...+..+.|++++..+++....| | .+.+++...... ..+. .
T Consensus 158 s~dg~v~iwd~~~---~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d---------g--~v~~wd~~~~~~~~~~~~~ 223 (357)
T 4g56_B 158 GKDFSVKVWDLSQ---KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED---------G--RILLWDTRKPKPATRIDFC 223 (357)
T ss_dssp ETTSCEEEEETTT---TEEEEEECCCSSCEEEEEECTTCSSCEEEEETT---------S--CEEECCTTSSSCBCBCCCT
T ss_pred eCCCeEEEEECCC---CcEEEEEcCCCCCEEEEEEccCCCceeeeeccC---------C--ceEEEECCCCceeeeeeec
Confidence 3578899999998 777877777777888999999998776654322 2 244555543321 2222 2
Q ss_pred CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCC-CeEEEEccCCCCCcEEEEEC
Q 020756 80 RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKG-KFLCLAGFGNLPGDMAFWDY 155 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG-~~l~~~g~~n~~g~i~iwD~ 155 (321)
.+...+.+++|+|++..++++ |..++.|.+||++. +.+..+ +...+++++|+|+| ++|++++ .|+.|+|||+
T Consensus 224 ~~~~~v~~v~~sp~~~~~la~-g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs---~D~~i~iwd~ 299 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKDDTFAC-GDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS---EDCTVAVLDA 299 (357)
T ss_dssp TCCSCEEEEEECTTSTTEEEE-EESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE---TTSCEEEECT
T ss_pred cccccccchhhhhcccceEEE-eecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe---CCCEEEEEEC
Confidence 356789999999986644433 56788999999954 455555 78899999999998 5788888 8999999999
Q ss_pred CCCeEEEeeeCC-CeeeEEEcc-CCCEEEEEEcCCceeecCcEEEEeec
Q 020756 156 VDGKQLGTTRAE-CSVTSEWSP-DGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 156 ~~~~~i~~~~~~-~~~~~~wSp-dG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
++++++..+.+. .++.++||| ||++|++++. |+.|+||++.
T Consensus 300 ~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~------Dg~v~iW~~~ 342 (357)
T 4g56_B 300 DFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGW------DHKVLHHHLP 342 (357)
T ss_dssp TSCEEEEECCCSSCEEEEEECSSSTTEEEEEET------TSCEEEEECC
T ss_pred CCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcC------CCeEEEEECC
Confidence 999888776543 789999999 8999999994 9999999984
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.84 E-value=9.4e-19 Score=164.38 Aligned_cols=204 Identities=18% Similarity=0.246 Sum_probs=157.5
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcC-CCceeeeecCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTD-GTHEGLVPLRK 81 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~-g~~~~~v~l~~ 81 (321)
..+.|+||++.. ++.+.....+......+.|+ ++.|+... . ...+.+++.. ..........|
T Consensus 154 ~dg~i~iwd~~~---~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~-----------dg~i~i~d~~~~~~~~~~~~~~ 216 (401)
T 4aez_A 154 GNGLVDIYDVES---QTKLRTMAGHQARVGCLSWN--RHVLSSGS-R-----------SGAIHHHDVRIANHQIGTLQGH 216 (401)
T ss_dssp TTSCEEEEETTT---CCEEEEECCCSSCEEEEEEE--TTEEEEEE-T-----------TSEEEEEETTSSSCEEEEEECC
T ss_pred CCCeEEEEECcC---CeEEEEecCCCCceEEEEEC--CCEEEEEc-C-----------CCCEEEEecccCcceeeEEcCC
Confidence 468899999998 77787777778888899994 45555432 1 1235566665 22223333468
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
.+.|.+++|+|+|+.|++. ..++.|.+||++. ..+..+ |...+.++.|+|+|..+++++.+..++.|++||+.++
T Consensus 217 ~~~v~~~~~~~~~~~l~s~--~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASG--GNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp SSCEEEEEECTTSSEEEEE--ETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred CCCeeEEEEcCCCCEEEEE--eCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 8999999999999999884 6688999999964 455565 6788999999999987777664446899999999999
Q ss_pred eEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-ee----EEeccCceEEEEEecCCCCCCCC
Q 020756 159 KQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LF----FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 159 ~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l----~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+++..+..+ .+..++|+|+|++|++++.. .|+.++||++... .. ...|...+..+.|+|++..+++.
T Consensus 295 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~----~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 367 (401)
T 4aez_A 295 ARVNTVDAGSQVTSLIWSPHSKEIMSTHGF----PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTA 367 (401)
T ss_dssp CEEEEEECSSCEEEEEECSSSSEEEEEECT----TTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEE
T ss_pred CEEEEEeCCCcEEEEEECCCCCeEEEEeec----CCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 988888765 78999999999999996521 3899999999653 22 33567789999999999888765
No 46
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.83 E-value=9.6e-19 Score=162.53 Aligned_cols=197 Identities=16% Similarity=0.276 Sum_probs=147.3
Q ss_pred CCCceEEEEEcCCcCCCCc-----eeeeecc-----cCccceEEeC----CCCCe-eEEEEEecccCCCceeecceeEEE
Q 020756 2 GSPASVQIYACGKDLQSQP-----LARRSFF-----RCSTVQLNWN----RGSTG-LLAVAQSDVDKTNQSYYGESKLNY 66 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~-----i~~~~~f-----~~~~~~~~Ws----p~G~~-l~~~~~~d~d~t~~s~~g~~~l~~ 66 (321)
+..+.|+||++.. ++. +.....+ ......+.|+ |+|++ |++.. .+ |...+|.
T Consensus 88 ~~dg~i~iw~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~d---------g~i~iwd 154 (397)
T 1sq9_A 88 SFSGDLLFYRITR---EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD-VK---------GTTYIWK 154 (397)
T ss_dssp ETTSCEEEEEEEE---CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE-TT---------SCEEEEE
T ss_pred cCCCCEEEEEccC---CcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe-CC---------CcEEEEe
Confidence 3568899999998 555 6666666 4778899999 99999 65542 11 3333454
Q ss_pred EEc------CCCcee-----eee------cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe-----C-
Q 020756 67 LTT------DGTHEG-----LVP------LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL-----G- 122 (321)
Q Consensus 67 l~~------~g~~~~-----~v~------l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~-----~- 122 (321)
+.. ... .. .+. ..+...|.+++|+|++ .|++ +..++.+.+||++. ..+..+ |
T Consensus 155 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~h~ 230 (397)
T 1sq9_A 155 FHPFADESNSLT-LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIAT--GFNNGTVQISELSTLRPLYNFESQHSMI 230 (397)
T ss_dssp EESSSSHHHHTT-TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE--ECTTSEEEEEETTTTEEEEEEECCC---
T ss_pred CCccccccccce-eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEE--EeCCCcEEEEECCCCceeEEEecccccc
Confidence 443 111 11 221 3468899999999999 6666 57789999999964 455544 3
Q ss_pred --CcCeeeEEEcCCCCeEEEEccCCCC---CcEEEEECCCCeEEEeeeC-------------C--CeeeEEEccCCCEEE
Q 020756 123 --SGPYNTVRWNPKGKFLCLAGFGNLP---GDMAFWDYVDGKQLGTTRA-------------E--CSVTSEWSPDGRYFM 182 (321)
Q Consensus 123 --~~~~~~~~~sPdG~~l~~~g~~n~~---g~i~iwD~~~~~~i~~~~~-------------~--~~~~~~wSpdG~~l~ 182 (321)
...+.++.|+|+|++|++++ .+ +.|.+||+.+++.+..+.. + .+..++|+|+|++|+
T Consensus 231 ~~~~~i~~i~~~~~~~~l~~~~---~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 307 (397)
T 1sq9_A 231 NNSNSIRSVKFSPQGSLLAIAH---DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 307 (397)
T ss_dssp CCCCCEEEEEECSSTTEEEEEE---EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE
T ss_pred ccCCccceEEECCCCCEEEEEe---cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE
Confidence 77899999999999999998 77 9999999999988888875 4 788999999999999
Q ss_pred EEEcCCceeecCcEEEEeec-Ccee--EE------ec---------------cCceEEEEEecCCC
Q 020756 183 TATTAPRLQIDNGIKIFHHN-GSLF--FK------KM---------------FDKLFQAEWKPVSP 224 (321)
Q Consensus 183 t~~s~~rl~~d~~v~iw~~~-g~~l--~~------~~---------------~~~~~~~~w~P~~~ 224 (321)
+++. |+.|+|||+. ++.+ +. .+ ...+..+.|+|+..
T Consensus 308 ~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 308 SAGW------DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp EEET------TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred EEeC------CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccc
Confidence 9994 9999999994 5555 33 33 67899999999973
No 47
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.83 E-value=7.5e-19 Score=164.29 Aligned_cols=177 Identities=16% Similarity=0.223 Sum_probs=132.5
Q ss_pred CCCceEEEEEcCCcCCCCceeee-----ecccCccceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ce
Q 020756 2 GSPASVQIYACGKDLQSQPLARR-----SFFRCSTVQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HE 74 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~-----~~f~~~~~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~ 74 (321)
+..+.|+||++.+ ++.+... ..+..+...+.|++ +++.++. .+.| |. +.+++.... ..
T Consensus 177 s~D~~i~~wd~~~---~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s-gs~D---------~~--v~~wd~~~~~~~ 241 (380)
T 3iz6_a 177 SGDQTCVLWDVTT---GQRISIFGSEFPSGHTADVLSLSINSLNANMFIS-GSCD---------TT--VRLWDLRITSRA 241 (380)
T ss_dssp CTTSCEEEECTTT---CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE-EETT---------SC--EEEEETTTTCCC
T ss_pred CCCCcEEEEEcCC---CcEEEEeecccCCCCccCeEEEEeecCCCCEEEE-EECC---------Ce--EEEEECCCCCcc
Confidence 3578999999998 6665443 23456778899987 5555544 3221 22 455555422 22
Q ss_pred eeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEeC--C-------cCeeeEEEcCCCCeEEEEccC
Q 020756 75 GLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILELG--S-------GPYNTVRWNPKGKFLCLAGFG 144 (321)
Q Consensus 75 ~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~~--~-------~~~~~~~~sPdG~~l~~~g~~ 144 (321)
......|.+.|.+++|+|+|++|++ +..|+.++|||++. ..+..+. . ..+.+++|+|+|++|++++
T Consensus 242 ~~~~~~h~~~v~~v~~~p~~~~l~s--~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~-- 317 (380)
T 3iz6_a 242 VRTYHGHEGDINSVKFFPDGQRFGT--GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY-- 317 (380)
T ss_dssp CEEECCCSSCCCEEEECTTSSEEEE--ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC--
T ss_pred eEEECCcCCCeEEEEEecCCCeEEE--EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE--
Confidence 2333458999999999999999988 47799999999965 4444441 1 2378999999999999998
Q ss_pred CCCCcEEEEECCCCeEEEee----eCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc
Q 020756 145 NLPGDMAFWDYVDGKQLGTT----RAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 145 n~~g~i~iwD~~~~~~i~~~----~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~ 204 (321)
.+|.|++||+.+++.+..+ ..| .+++++|||||++|++++. |+.++||++.+.
T Consensus 318 -~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~------D~~i~iW~~~~~ 376 (380)
T 3iz6_a 318 -SNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW------DKNLKIWAFSGH 376 (380)
T ss_dssp -TTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT------TSCEEEEECCSS
T ss_pred -CCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC------CCCEEEEecCCC
Confidence 8999999999988877666 334 6889999999999999994 999999999764
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.83 E-value=2.3e-18 Score=159.98 Aligned_cols=174 Identities=11% Similarity=0.139 Sum_probs=136.4
Q ss_pred CCceEEEEEcCCcCCCCceeeeec--ccCccceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec
Q 020756 3 SPASVQIYACGKDLQSQPLARRSF--FRCSTVQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL 79 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~--f~~~~~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l 79 (321)
..+.|+||++.. ++....... +...+..+.|+| ++++|+.. ..| | .+.+++..+.....+..
T Consensus 94 ~dg~i~iwd~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~d---------~--~i~iwd~~~~~~~~~~~ 158 (383)
T 3ei3_B 94 KGGDIILWDYDV---QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS-SIR---------G--ATTLRDFSGSVIQVFAK 158 (383)
T ss_dssp BTSCEEEEETTS---TTCEEEECCCSTTCBEEEEEEETTEEEEEEEE-ETT---------T--EEEEEETTSCEEEEEEC
T ss_pred CCCeEEEEeCCC---cccceeeecCCcCCceeEEEeCCCCCCEEEEE-eCC---------C--EEEEEECCCCceEEEec
Confidence 468899999998 555555543 667888999999 55666553 211 2 35666666543333322
Q ss_pred C--CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCC-eEEEEccCCCCCcEEEEE
Q 020756 80 R--KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGK-FLCLAGFGNLPGDMAFWD 154 (321)
Q Consensus 80 ~--~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~-~l~~~g~~n~~g~i~iwD 154 (321)
. +...|.+++|+|+++.|++. ..++.|.+||+++..+..+ |...+.++.|+|+|+ +|++++ .|+.|++||
T Consensus 159 ~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---~d~~i~iwd 233 (383)
T 3ei3_B 159 TDSWDYWYCCVDVSVSRQMLATG--DSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSS---VDATVKLWD 233 (383)
T ss_dssp CCCSSCCEEEEEEETTTTEEEEE--ETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEE---TTSEEEEEE
T ss_pred cCCCCCCeEEEEECCCCCEEEEE--CCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEe---CCCEEEEEe
Confidence 2 34789999999999998884 6789999999988887777 788999999999999 888888 899999999
Q ss_pred CCC----CeEEEeeeCC-CeeeEEEcc-CCCEEEEEEcCCceeecCcEEEEeec
Q 020756 155 YVD----GKQLGTTRAE-CSVTSEWSP-DGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 155 ~~~----~~~i~~~~~~-~~~~~~wSp-dG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
+.+ +.++..+.+. .+..++|+| ||++|++++. |+.++|||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~------d~~i~iwd~~ 281 (383)
T 3ei3_B 234 LRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ------RNEIRVYSSY 281 (383)
T ss_dssp GGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES------SSEEEEEETT
T ss_pred CCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC------CCcEEEEECC
Confidence 987 6677766543 789999999 9999999994 9999999984
No 49
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.83 E-value=1.4e-18 Score=162.92 Aligned_cols=206 Identities=9% Similarity=0.151 Sum_probs=150.7
Q ss_pred CCCceEEEEEcCCcC-CCCceeeeecccCccceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCCC-------
Q 020756 2 GSPASVQIYACGKDL-QSQPLARRSFFRCSTVQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT------- 72 (321)
Q Consensus 2 g~p~~v~v~~~~~~~-~~~~i~~~~~f~~~~~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~------- 72 (321)
+..+.|+||++.... ....+.....+...+..+.|+| +++.|+... .| |. +.+++....
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-~d---------g~--v~vw~~~~~~~~~~~~ 121 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS-ED---------CT--VMVWEIPDGGLVLPLR 121 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE-TT---------SE--EEEEECCTTCCSSCBC
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe-CC---------Ce--EEEEEccCCCCccccC
Confidence 457899999997621 0123444445677889999999 777766542 11 33 444444332
Q ss_pred ceeeeecCCCCCeEEEEECcCC-CEEEEEEccCCCeEEEEeCC-CceeEEe----CCcCeeeEEEcCCCCeEEEEccCCC
Q 020756 73 HEGLVPLRKEGPVHDVQWSYSG-SEFAVVYGFMPASATIFNKK-CRPILEL----GSGPYNTVRWNPKGKFLCLAGFGNL 146 (321)
Q Consensus 73 ~~~~v~l~~~~~v~~~~wsP~g-~~l~~~~g~~~~~i~i~d~~-~~~~~~~----~~~~~~~~~~sPdG~~l~~~g~~n~ 146 (321)
........|...|.+++|+|+| ..|++ +..++.|.+||+. +..+..+ |...+.++.|+|+|++|++++ .
T Consensus 122 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~ 196 (402)
T 2aq5_A 122 EPVITLEGHTKRVGIVAWHPTAQNVLLS--AGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC---R 196 (402)
T ss_dssp SCSEEEECCSSCEEEEEECSSBTTEEEE--EETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE---T
T ss_pred CceEEecCCCCeEEEEEECcCCCCEEEE--EcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe---c
Confidence 1122223588999999999998 46666 4668899999995 4456666 678899999999999999999 8
Q ss_pred CCcEEEEECCCCeEEEee-eCC---CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-ce-e--EE-eccCceEEE
Q 020756 147 PGDMAFWDYVDGKQLGTT-RAE---CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-SL-F--FK-KMFDKLFQA 217 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~-~~~---~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-~~-l--~~-~~~~~~~~~ 217 (321)
++.|++||+++++.+..+ ..+ .+..+.|+|||++|+++.+.. .|+.++|||+.. .. + .. .+...+..+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM---SERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT---CCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC---CCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 999999999999988887 454 378899999999999983100 389999999954 32 2 22 345679999
Q ss_pred EEecCCCCCC
Q 020756 218 EWKPVSPDKF 227 (321)
Q Consensus 218 ~w~P~~~~~~ 227 (321)
.|+|+...++
T Consensus 274 ~~s~~~~~l~ 283 (402)
T 2aq5_A 274 FFDPDTNIVY 283 (402)
T ss_dssp EEETTTTEEE
T ss_pred EEcCCCCEEE
Confidence 9999998876
No 50
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.83 E-value=1.3e-18 Score=163.25 Aligned_cols=210 Identities=12% Similarity=0.128 Sum_probs=152.2
Q ss_pred CCCceEEEEEcCCcCC----CCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee
Q 020756 2 GSPASVQIYACGKDLQ----SQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV 77 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~----~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v 77 (321)
+..+.|+||++..... .+++.....+...+..+.|+|+|..+++.+..| | .+.+++.........
T Consensus 101 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---------g--~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 101 SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD---------N--VILVWDVGTGAAVLT 169 (402)
T ss_dssp ETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT---------S--CEEEEETTTTEEEEE
T ss_pred eCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC---------C--EEEEEECCCCCccEE
Confidence 3578999999998310 056667777778889999999996555554321 2 256666655433222
Q ss_pred e--cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe---CCcC-eeeEEEcCCCCeEEEEccCCCCCcE
Q 020756 78 P--LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL---GSGP-YNTVRWNPKGKFLCLAGFGNLPGDM 150 (321)
Q Consensus 78 ~--l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~---~~~~-~~~~~~sPdG~~l~~~g~~n~~g~i 150 (321)
. ..|.+.|.+++|+|+|+.|++. ..++.|.+||++. ..+..+ |... +..+.|+|+|++|+++.....++.|
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i 247 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGALICTS--CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQV 247 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSSCEEEE--ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEE
T ss_pred EecCCCCCceEEEEECCCCCEEEEE--ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceE
Confidence 2 3588999999999999999985 6789999999964 455554 3343 7899999999999988222278999
Q ss_pred EEEECCCCeE-E--EeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCce--e--EEe--ccCceEEEEEe
Q 020756 151 AFWDYVDGKQ-L--GTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSL--F--FKK--MFDKLFQAEWK 220 (321)
Q Consensus 151 ~iwD~~~~~~-i--~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~--l--~~~--~~~~~~~~~w~ 220 (321)
.+||+++++. + ..+... .+..++|+|||++|+++++ .|+.|+||++.... + ... +...+..+.|+
T Consensus 248 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~-----~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~s 322 (402)
T 2aq5_A 248 ALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGK-----GDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYM 322 (402)
T ss_dssp EEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEET-----TCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEEC
T ss_pred EEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEc-----CCCeEEEEEecCCCcceEeecccccCCcccceEEe
Confidence 9999987643 2 222222 6888999999999987764 38999999996432 2 222 34789999999
Q ss_pred cCCCCCCCC
Q 020756 221 PVSPDKFGD 229 (321)
Q Consensus 221 P~~~~~~~~ 229 (321)
|+...++..
T Consensus 323 p~~~~~~s~ 331 (402)
T 2aq5_A 323 PKRGLEVNK 331 (402)
T ss_dssp CGGGSCGGG
T ss_pred cccccceec
Confidence 998877754
No 51
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.83 E-value=1.7e-18 Score=164.53 Aligned_cols=204 Identities=19% Similarity=0.311 Sum_probs=148.2
Q ss_pred CCCceEEEEEcCCc-------CCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce
Q 020756 2 GSPASVQIYACGKD-------LQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE 74 (321)
Q Consensus 2 g~p~~v~v~~~~~~-------~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~ 74 (321)
+..+.|+||++... ....++.....+......+.|+|++..+++....+ |. |.++++.....
T Consensus 148 ~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d---------g~--i~vwd~~~~~~ 216 (430)
T 2xyi_A 148 TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD---------HT--ICLWDINATPK 216 (430)
T ss_dssp CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT---------SC--EEEEETTSCCB
T ss_pred CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC---------Ce--EEEEeCCCCCC
Confidence 45688999999861 11345666666778889999999999554443211 32 45555544111
Q ss_pred -------eeeecCCCCCeEEEEECc-CCCEEEEEEccCCCeEEEEeCCCc----eeEEe--CCcCeeeEEEcCCCC-eEE
Q 020756 75 -------GLVPLRKEGPVHDVQWSY-SGSEFAVVYGFMPASATIFNKKCR----PILEL--GSGPYNTVRWNPKGK-FLC 139 (321)
Q Consensus 75 -------~~v~l~~~~~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~~~----~~~~~--~~~~~~~~~~sPdG~-~l~ 139 (321)
......|...|++++|+| ++..|+++ ..++.|.+||++.. .+..+ |...++++.|+|+|+ +|+
T Consensus 217 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~ 294 (430)
T 2xyi_A 217 EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV--ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 294 (430)
T ss_dssp GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE--ETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred CCceeccceeecCCCCCEeeeEEeCCCCCEEEEE--eCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEE
Confidence 122235888999999999 55566664 56889999999643 44554 788999999999998 466
Q ss_pred EEccCCCCCcEEEEECCC-CeEEEeeeCC--CeeeEEEccCCCE-EEEEEcCCceeecCcEEEEeecC------------
Q 020756 140 LAGFGNLPGDMAFWDYVD-GKQLGTTRAE--CSVTSEWSPDGRY-FMTATTAPRLQIDNGIKIFHHNG------------ 203 (321)
Q Consensus 140 ~~g~~n~~g~i~iwD~~~-~~~i~~~~~~--~~~~~~wSpdG~~-l~t~~s~~rl~~d~~v~iw~~~g------------ 203 (321)
+++ .+|.|.+||+++ ...+..+..| .+++++|+|+|++ |++++ .|+.|+|||+..
T Consensus 295 tg~---~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~~ 365 (430)
T 2xyi_A 295 TGS---ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAED 365 (430)
T ss_dssp EEE---TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE------TTSCCEEEEGGGTTCCCCHHHHHH
T ss_pred EEe---CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe------CCCcEEEEeCCCCccccCcccccc
Confidence 777 889999999987 4566667655 7899999999965 66666 499999999964
Q ss_pred ---cee--EEeccCceEEEEEecCCCCCC
Q 020756 204 ---SLF--FKKMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 204 ---~~l--~~~~~~~~~~~~w~P~~~~~~ 227 (321)
+++ +..|...+.++.|+|+.+.++
T Consensus 366 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 394 (430)
T 2xyi_A 366 GPPELLFIHGGHTAKISDFSWNPNEPWII 394 (430)
T ss_dssp CCTTEEEECCCCSSCEEEEEECSSSTTEE
T ss_pred CCcceEEEcCCCCCCceEEEECCCCCCEE
Confidence 444 334667899999999988444
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.83 E-value=2.9e-18 Score=161.06 Aligned_cols=202 Identities=13% Similarity=0.186 Sum_probs=153.2
Q ss_pred CCCceEEEEEcCCcCCCCceeeeec-ccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSF-FRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLR 80 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~-f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~ 80 (321)
|..+.|+||++.+ ++.+..... .......+.|+|+|++|++... . | .+.+++............
T Consensus 110 ~~d~~v~lw~~~~---~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~-----d-----g--~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 110 ALERNVYVWNADS---GSVSALAETDESTYVASVKWSHDGSFLSVGLG-----N-----G--LVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp EETTEEEEEETTT---CCEEEEEECCTTCCEEEEEECTTSSEEEEEET-----T-----S--CEEEEETTTCCEEEEECC
T ss_pred ECCCeEEEeeCCC---CcEeEeeecCCCCCEEEEEECCCCCEEEEECC-----C-----C--eEEEEECcCCeEEEEecC
Confidence 3568999999988 566555554 4667889999999999877531 1 2 356666655433333346
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC--CceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK--CRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV 156 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~--~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~ 156 (321)
|.+.|.+++|+ ++.|++ +..++.+.+||++ ...+..+ |...+.++.|+|+|++|++++ .++.|++||+.
T Consensus 175 ~~~~v~~~~~~--~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~~ 247 (401)
T 4aez_A 175 HQARVGCLSWN--RHVLSS--GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG---NDNVVQIWDAR 247 (401)
T ss_dssp CSSCEEEEEEE--TTEEEE--EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETT
T ss_pred CCCceEEEEEC--CCEEEE--EcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe---CCCeEEEccCC
Confidence 88999999994 567776 4678999999996 3344444 788999999999999999999 89999999999
Q ss_pred CCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEE-eccCceEEEEEecCCCCCCC
Q 020756 157 DGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFK-KMFDKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 157 ~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~-~~~~~~~~~~w~P~~~~~~~ 228 (321)
+++.+..+..+ .+..++|+|+|..+++.++. ..|+.+++||+. ++.+.. .+...+..+.|+|+...++.
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g---s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 248 SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG---TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp CSSEEEEECCCSSCCCEEEECTTSTTEEEEECC---TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred CCCccEEecCCcceEEEEEECCCCCCEEEEecC---CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEE
Confidence 99888877665 78899999988666654320 028999999984 555533 35568999999999988876
No 53
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.6e-19 Score=163.77 Aligned_cols=204 Identities=7% Similarity=-0.001 Sum_probs=142.1
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eeeeecC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGLVPLR 80 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~v~l~ 80 (321)
|..+.|+||++.+ ++.+.... ......+.|+|+ ++..+ .|.+-..+.....+..++..... ...+...
T Consensus 55 ~~Dg~v~iwd~~~---~~~~~~~~--~~~v~~~~~~~~----~~s~s--~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 55 CEDGALHFTQLKD---SKTITTIT--TPNPRTGGEHPA----IISRG--PCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EETTEEEEEEESS---SSCEEEEE--EECCCTTCCCCS----EEEEC--STTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred CCCCcEEEEECCC---CcEEEEEe--cCCceeeeeCCc----eEEec--CCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 3578999999998 66666555 344556778887 23222 22222222222233334443332 3344556
Q ss_pred CCCCeEEEEECc--CCCEEEEEEccCCCeEEEEeCCCcee-EEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEE
Q 020756 81 KEGPVHDVQWSY--SGSEFAVVYGFMPASATIFNKKCRPI-LEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWD 154 (321)
Q Consensus 81 ~~~~v~~~~wsP--~g~~l~~~~g~~~~~i~i~d~~~~~~-~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD 154 (321)
|.++|.+++|+| ++++|+++ ..|+.+.+||++.... ..+ +...+.++.|+|+|++|++++ .+|.|++||
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~--s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~---~dg~i~iwd 198 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWA--DNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS---PDGILDVYN 198 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEE--ETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC---TTSCEEEEE
T ss_pred CCCCEEEEEcCCCCCCCEEEEE--eCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc---CCCEEEEEE
Confidence 778999999999 99999885 6789999999965433 333 345799999999999999998 899999999
Q ss_pred CCCCeEE-EeeeC-C--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-eeEEe-----ccCce--EEEEEecC
Q 020756 155 YVDGKQL-GTTRA-E--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LFFKK-----MFDKL--FQAEWKPV 222 (321)
Q Consensus 155 ~~~~~~i-~~~~~-~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l~~~-----~~~~~--~~~~w~P~ 222 (321)
+++++.+ ..+.. | .++.++|+|+|.+|++++ ++.++|||+... .+... +...+ ..++|+|+
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-------~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-------DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-------SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-------CCeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 9998776 66665 4 789999999999999999 559999999543 22111 11223 35999999
Q ss_pred CCCCCC
Q 020756 223 SPDKFG 228 (321)
Q Consensus 223 ~~~~~~ 228 (321)
+..++.
T Consensus 272 g~~l~~ 277 (343)
T 3lrv_A 272 GKNMIA 277 (343)
T ss_dssp SSEEEE
T ss_pred CCEEEE
Confidence 988887
No 54
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.82 E-value=3.3e-19 Score=168.25 Aligned_cols=153 Identities=11% Similarity=0.192 Sum_probs=114.9
Q ss_pred ccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee--------ecCCCCCeEEEEECcCC-CEE
Q 020756 27 FRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV--------PLRKEGPVHDVQWSYSG-SEF 97 (321)
Q Consensus 27 f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v--------~l~~~~~v~~~~wsP~g-~~l 97 (321)
+...+..+.|+|+|++|+.. .| | .+.+++......... ...|.+.|.+++|+|+| +.|
T Consensus 176 h~~~v~~~~~~~~~~~l~s~--~d---------~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 242 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSA--DD---------L--RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTF 242 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEE--CS---------S--EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEE
T ss_pred CCcceEEEEEcCCCCEEEEe--CC---------C--eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEE
Confidence 45677899999999988763 11 2 244555542211111 12478899999999999 777
Q ss_pred EEEEccCCCeEEEEeCCCce-----eEEe--CCc------------CeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC-
Q 020756 98 AVVYGFMPASATIFNKKCRP-----ILEL--GSG------------PYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD- 157 (321)
Q Consensus 98 ~~~~g~~~~~i~i~d~~~~~-----~~~~--~~~------------~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~- 157 (321)
++ +..++.|.+||++... +..+ +.. .+.++.|+|+|++|++++ . +.|++||+++
T Consensus 243 ~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---~-~~v~iwd~~~~ 316 (447)
T 3dw8_B 243 VY--SSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD---Y-LSVKVWDLNME 316 (447)
T ss_dssp EE--EETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE---S-SEEEEEETTCC
T ss_pred EE--EeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee---C-CeEEEEeCCCC
Confidence 77 4678999999996543 4555 333 899999999999999998 6 9999999987
Q ss_pred CeEEEeeeCCC-----------------eeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc
Q 020756 158 GKQLGTTRAEC-----------------SVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 158 ~~~i~~~~~~~-----------------~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~ 204 (321)
++++..+..|. ++.++|+|||++|++++. |+.|+|||+...
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~------dg~v~iwd~~~~ 374 (447)
T 3dw8_B 317 NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSY------NNFFRMFDRNTK 374 (447)
T ss_dssp SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECS------TTEEEEEETTTC
T ss_pred ccccceeeccccccccccccccccccccceEEEECCCCCEEEEecc------CCEEEEEEcCCC
Confidence 77777777662 233899999999999984 999999999544
No 55
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.5e-18 Score=159.26 Aligned_cols=203 Identities=17% Similarity=0.287 Sum_probs=151.4
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCC--CCeeEEEEEecccCCCceeecceeEEEEEcCCCc--eeeee
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRG--STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH--EGLVP 78 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~--G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~--~~~v~ 78 (321)
..+.|+||++.... .+.+.....+...+..+.|+++ |++|+... .| |. +.+++..... .....
T Consensus 31 ~dg~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~d---------g~--v~iwd~~~~~~~~~~~~ 97 (379)
T 3jrp_A 31 SDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-YD---------GK--VLIWKEENGRWSQIAVH 97 (379)
T ss_dssp TTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TT---------SC--EEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEecCCCc-ceeeeEecCCCCcEEEEEeCCCCCCCEEEEec-cC---------CE--EEEEEcCCCceeEeeee
Confidence 57899999998421 4555566666778889999987 77776642 11 33 3444444332 22333
Q ss_pred cCCCCCeEEEEECcC--CCEEEEEEccCCCeEEEEeCCCc---eeEEe--CCcCeeeEEEcC-------------CCCeE
Q 020756 79 LRKEGPVHDVQWSYS--GSEFAVVYGFMPASATIFNKKCR---PILEL--GSGPYNTVRWNP-------------KGKFL 138 (321)
Q Consensus 79 l~~~~~v~~~~wsP~--g~~l~~~~g~~~~~i~i~d~~~~---~~~~~--~~~~~~~~~~sP-------------dG~~l 138 (321)
..|...|.+++|+|+ +..|++. ..++.+.+||++.. ....+ +...+.++.|+| ++++|
T Consensus 98 ~~~~~~v~~~~~~~~~~~~~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 98 AVHSASVNSVQWAPHEYGPLLLVA--SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEE--ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred cCCCcceEEEEeCCCCCCCEEEEe--cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 347899999999999 8888885 66889999999543 22333 788999999999 69999
Q ss_pred EEEccCCCCCcEEEEECCCCe----EEEeeeCC--CeeeEEEccC---CCEEEEEEcCCceeecCcEEEEeecCc-----
Q 020756 139 CLAGFGNLPGDMAFWDYVDGK----QLGTTRAE--CSVTSEWSPD---GRYFMTATTAPRLQIDNGIKIFHHNGS----- 204 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~----~i~~~~~~--~~~~~~wSpd---G~~l~t~~s~~rl~~d~~v~iw~~~g~----- 204 (321)
++++ .++.|++||++++. .+..+..| .+.+++|+|+ |++|++++. |+.++|||+...
T Consensus 176 ~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~ 246 (379)
T 3jrp_A 176 VTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ------DRTCIIWTQDNEQGPWK 246 (379)
T ss_dssp EEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET------TSCEEEEEESSTTSCCE
T ss_pred EEEe---CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC------CCEEEEEeCCCCCccce
Confidence 9999 89999999998653 44556555 7889999999 899999994 999999999643
Q ss_pred -eeEE--eccCceEEEEEecCCCCCCCC
Q 020756 205 -LFFK--KMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 205 -~l~~--~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.+.. .+...+..+.|+|++..++..
T Consensus 247 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 274 (379)
T 3jrp_A 247 KTLLKEEKFPDVLWRASWSLSGNVLALS 274 (379)
T ss_dssp EEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred eeeeccccCCCcEEEEEEcCCCCEEEEe
Confidence 1121 256689999999999888764
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.82 E-value=9.6e-19 Score=162.89 Aligned_cols=200 Identities=10% Similarity=0.173 Sum_probs=152.7
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCc---------------cceEEeCCCCCeeEEEEEecccCCCceeecceeEEE
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCS---------------TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNY 66 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~---------------~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~ 66 (321)
+..+.|++|++.+ ++.+......... ...+.|++++. +++. . ....++.
T Consensus 168 ~~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-----------~~g~i~~ 231 (425)
T 1r5m_A 168 DVENVTILWNVIS---GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIP-G-----------PKGAIFV 231 (425)
T ss_dssp ETTCCEEEEETTT---TEEEEEECCC---------------CCCBSCCEEEETTE-EEEE-C-----------GGGCEEE
T ss_pred ecCCeEEEEECCC---CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEE-c-----------CCCeEEE
Confidence 3568899999988 6777666665554 78899999865 3332 1 1123566
Q ss_pred EEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEcc
Q 020756 67 LTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGF 143 (321)
Q Consensus 67 l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~ 143 (321)
++............|..+|.+++|+|+++.|++. ..++.+.+||+.. ..+..+ +...+.++.|+|+| +|++++
T Consensus 232 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~- 307 (425)
T 1r5m_A 232 YQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA--SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCS- 307 (425)
T ss_dssp EETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE--ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEE-
T ss_pred EEcCCCceeeeeccCCCceEEEEECCCCCEEEEE--cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEe-
Confidence 6665543333334578999999999999988885 6688999999854 455555 67899999999999 888888
Q ss_pred CCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Cc----------------
Q 020756 144 GNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GS---------------- 204 (321)
Q Consensus 144 ~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~---------------- 204 (321)
.++.|++||+.+++.+..+..+ .+..++|+|+|++|++++. |+.|+||++. +.
T Consensus 308 --~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 379 (425)
T 1r5m_A 308 --MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM------DGQVNVYDLKKLNSKSRSLYGNRDGILNP 379 (425)
T ss_dssp --TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET------TSCEEEEECHHHHC--------------C
T ss_pred --CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC------CCeEEEEECCCCccceeeeecccccccCc
Confidence 8899999999999988888765 7889999999999999994 8999999995 33
Q ss_pred ----ee--EEeccC--ceEEEEEecCCCCCCCC
Q 020756 205 ----LF--FKKMFD--KLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 205 ----~l--~~~~~~--~~~~~~w~P~~~~~~~~ 229 (321)
.+ +..+.. .+..+.|+|+...++..
T Consensus 380 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 412 (425)
T 1r5m_A 380 LPIPLYASYQSSQDNDYIFDLSWNCAGNKISVA 412 (425)
T ss_dssp EECCEEEEECCTTCCCCEEEEEECTTSSEEEEE
T ss_pred ccchhhhhhcCcccCCceEEEEccCCCceEEEE
Confidence 34 334444 89999999998877643
No 57
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.3e-18 Score=156.11 Aligned_cols=181 Identities=10% Similarity=0.264 Sum_probs=131.7
Q ss_pred CceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eee--eecC-CCCCeEEEEECcCC
Q 020756 19 QPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGL--VPLR-KEGPVHDVQWSYSG 94 (321)
Q Consensus 19 ~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~--v~l~-~~~~v~~~~wsP~g 94 (321)
+.+.....+...+..+.|+++ +++..+.| |. +.+++..... ... +... |.++|.+++|+|+|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~---~las~~~D---------~~--i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 70 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG---ILATGSTD---------RK--IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT 70 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT---EEEEEESS---------SC--EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS
T ss_pred ccceeeccCCCceeeeccCCC---EEEEEcCC---------CE--EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC
Confidence 345555566777888999987 33433221 22 4444444321 111 2123 88999999999999
Q ss_pred CEEEEEEccCCCeEEEEeCCC--------ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC----CeE
Q 020756 95 SEFAVVYGFMPASATIFNKKC--------RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD----GKQ 160 (321)
Q Consensus 95 ~~l~~~~g~~~~~i~i~d~~~--------~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~----~~~ 160 (321)
+.|++. ..|+.|+|||+.. ..+..+ |...+.++.|+|+|++|++++ .|+.|++||+.. .++
T Consensus 71 ~~las~--s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s---~D~~v~iwd~~~~~~~~~~ 145 (330)
T 2hes_X 71 SLLAAG--SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS---RDKSVWIWETDESGEEYEC 145 (330)
T ss_dssp SEEEEE--ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE---TTSCEEEEECCTTCCCCEE
T ss_pred CEEEEE--eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe---CCCEEEEEeccCCCCCeEE
Confidence 998884 6789999999842 234444 788999999999999999999 899999999942 256
Q ss_pred EEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc---ee--EEeccCceEEEEEecCCC
Q 020756 161 LGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS---LF--FKKMFDKLFQAEWKPVSP 224 (321)
Q Consensus 161 i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~---~l--~~~~~~~~~~~~w~P~~~ 224 (321)
+..+..| .+..++|+|+|.+|++++. |+.++||+.... .+ +..|...++.+.|+|+..
T Consensus 146 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~------D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 210 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWHPSEALLASSSY------DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEG 210 (330)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEET------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSS
T ss_pred EEEeccCCCceEEEEECCCCCEEEEEcC------CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCC
Confidence 7777766 7899999999999999994 999999998532 33 456788999999999843
No 58
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.82 E-value=6.9e-19 Score=160.45 Aligned_cols=202 Identities=16% Similarity=0.216 Sum_probs=148.3
Q ss_pred CCCceEEEEEcCCcCCCC--ceeeeecccCccceEEeCCC--CCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eee
Q 020756 2 GSPASVQIYACGKDLQSQ--PLARRSFFRCSTVQLNWNRG--STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGL 76 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~--~i~~~~~f~~~~~~~~Wsp~--G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~ 76 (321)
+..+.|+||++.+ ++ .+....-+...+..+.|+++ |+.|+.. +.| +. +.+++..... ...
T Consensus 32 s~D~~v~lwd~~~---~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~-s~D---------~~--v~iWd~~~~~~~~~ 96 (316)
T 3bg1_A 32 SSDRSVKIFDVRN---GGQILIADLRGHEGPVWQVAWAHPMYGNILASC-SYD---------RK--VIIWREENGTWEKS 96 (316)
T ss_dssp ETTTEEEEEEEET---TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEE-ETT---------SC--EEEECCSSSCCCEE
T ss_pred eCCCeEEEEEecC---CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEE-ECC---------CE--EEEEECCCCcceEE
Confidence 3578999999987 43 34455556778889999864 7766554 211 22 4444544321 122
Q ss_pred ee-cCCCCCeEEEEECcC--CCEEEEEEccCCCeEEEEeCCCce-e---EEe--CCcCeeeEEEcCC-------------
Q 020756 77 VP-LRKEGPVHDVQWSYS--GSEFAVVYGFMPASATIFNKKCRP-I---LEL--GSGPYNTVRWNPK------------- 134 (321)
Q Consensus 77 v~-l~~~~~v~~~~wsP~--g~~l~~~~g~~~~~i~i~d~~~~~-~---~~~--~~~~~~~~~~sPd------------- 134 (321)
.. ..|.+.|.+++|+|+ |..|++ +..|+.+.+||++... . ..+ |...++++.|+|+
T Consensus 97 ~~~~~h~~~V~~v~~~p~~~g~~las--gs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3bg1_A 97 HEHAGHDSSVNSVCWAPHDYGLILAC--GSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174 (316)
T ss_dssp EEECCCSSCCCEEEECCTTTCSCEEE--ECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSC
T ss_pred EEccCCCCceEEEEECCCCCCcEEEE--EcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccccc
Confidence 22 358899999999998 667776 5779999999986542 1 222 6778999999998
Q ss_pred ----CCeEEEEccCCCCCcEEEEECCCC---eEEEeeeCC--CeeeEEEccCC----CEEEEEEcCCceeecCcEEEEee
Q 020756 135 ----GKFLCLAGFGNLPGDMAFWDYVDG---KQLGTTRAE--CSVTSEWSPDG----RYFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 135 ----G~~l~~~g~~n~~g~i~iwD~~~~---~~i~~~~~~--~~~~~~wSpdG----~~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
+++|++++ .|+.|++||++.. +++..+..| .+..++|+|++ .+|++++. |+.|+||++
T Consensus 175 ~~~~~~~l~sgs---~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~------D~~v~iw~~ 245 (316)
T 3bg1_A 175 KPNYIKRFASGG---CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ------DGRVFIWTC 245 (316)
T ss_dssp CCCCCCBEECCB---TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET------TCEEEEEEC
T ss_pred CccccceEEEec---CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC------CCeEEEEEc
Confidence 47888888 8999999999754 466677766 68999999997 88999994 999999998
Q ss_pred cC----c---eeEEeccCceEEEEEecCCCCCCCC
Q 020756 202 NG----S---LFFKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 202 ~g----~---~l~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.. . .+...+...++.++|+|++..+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred cCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 54 1 2345567899999999999887754
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.81 E-value=1.3e-18 Score=163.03 Aligned_cols=200 Identities=7% Similarity=0.090 Sum_probs=147.9
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.. ++.+.....+......+.|+|+|++|+... . ...+.+++............|.
T Consensus 117 ~dg~i~iwd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~-----------d~~i~iwd~~~~~~~~~~~~h~ 181 (420)
T 3vl1_A 117 TEGDIKVLDSNF---NLQREIDQAHVSEITKLKFFPSGEALISSS-Q-----------DMQLKIWSVKDGSNPRTLIGHR 181 (420)
T ss_dssp TTSCEEEECTTS---CEEEEETTSSSSCEEEEEECTTSSEEEEEE-T-----------TSEEEEEETTTCCCCEEEECCS
T ss_pred CCCCEEEEeCCC---cceeeecccccCccEEEEECCCCCEEEEEe-C-----------CCeEEEEeCCCCcCceEEcCCC
Confidence 568899999987 666665556778889999999999877642 1 1235666665443333333588
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEeC--------------------------CcCeeeEEEcCCC
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILELG--------------------------SGPYNTVRWNPKG 135 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~~--------------------------~~~~~~~~~sPdG 135 (321)
+.|.+++|+|+|+.|++. ..++.+.+||++. ..+..+. ...+.++.|+|+|
T Consensus 182 ~~v~~~~~~~~~~~l~s~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSA--SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp SCEEEEEEETTTTEEEEE--ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CcEEEEEEcCCCCEEEEE--cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 999999999999999974 6688999999964 4555552 2445556778999
Q ss_pred CeEEEEccCCCCCcEEEEECCCCeEEEeeeC-C--CeeeEEEccCCC-EEEEEEcCCceeecCcEEEEeecC-ce-e--E
Q 020756 136 KFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA-E--CSVTSEWSPDGR-YFMTATTAPRLQIDNGIKIFHHNG-SL-F--F 207 (321)
Q Consensus 136 ~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~-~--~~~~~~wSpdG~-~l~t~~s~~rl~~d~~v~iw~~~g-~~-l--~ 207 (321)
++|++++ .+|.|++||+.+++.+..+.. + .+..++|+|+|+ +|++++. |+.++|||+.. +. + .
T Consensus 260 ~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~------dg~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 260 KYVIAGH---VSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE------NGMLAQWDLRSPECPVGEF 330 (420)
T ss_dssp EEEEEEE---TTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET------TSEEEEEETTCTTSCSEEE
T ss_pred CEEEEEc---CCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC------CCeEEEEEcCCCcCchhhh
Confidence 9999998 899999999999887776654 3 688999999999 8999884 99999999953 33 2 3
Q ss_pred Ee-ccCceEEEEEecCCCCCCCC
Q 020756 208 KK-MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 208 ~~-~~~~~~~~~w~P~~~~~~~~ 229 (321)
.. +...+..+.| |++..+++.
T Consensus 331 ~~~~~~~v~~~~~-~~~~~l~s~ 352 (420)
T 3vl1_A 331 LINEGTPINNVYF-AAGALFVSS 352 (420)
T ss_dssp EESTTSCEEEEEE-ETTEEEEEE
T ss_pred hccCCCCceEEEe-CCCCEEEEe
Confidence 33 4456777755 555555544
No 60
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.81 E-value=2.2e-18 Score=157.35 Aligned_cols=191 Identities=14% Similarity=0.176 Sum_probs=141.4
Q ss_pred CCceeeeecccCccceEEeCCC---CCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCC
Q 020756 18 SQPLARRSFFRCSTVQLNWNRG---STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSG 94 (321)
Q Consensus 18 ~~~i~~~~~f~~~~~~~~Wsp~---G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g 94 (321)
.+.+....-++..+..+.|+|+ |++|++.. .| |...||.+...+.........|.++|.+++|+|++
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~-~d---------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 98 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGS-WA---------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG 98 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEE-TT---------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEEC-CC---------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC
Confidence 3455555566788999999999 57766642 11 33334444332332223333589999999999999
Q ss_pred CEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEE--cCCCCeEEEEccCCCCCcEEEEECCCCeEEEe-------
Q 020756 95 SEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRW--NPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGT------- 163 (321)
Q Consensus 95 ~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~--sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~------- 163 (321)
++|+++ ..++.|.+||+.......+ |...+.++.| +|+|++|++++ .++.|++||+++++.+..
T Consensus 99 ~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (368)
T 3mmy_A 99 SKVFTA--SCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGS---WDKTLKFWDTRSSNPMMVLQLPERC 173 (368)
T ss_dssp SEEEEE--ETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEE---TTSEEEEECSSCSSCSEEEECSSCE
T ss_pred CEEEEE--cCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEcc---CCCcEEEEECCCCcEEEEEecCCCc
Confidence 999985 6689999999976544444 7889999999 99999999998 889999999876532111
Q ss_pred --------------------------------------------------------------------------------
Q 020756 164 -------------------------------------------------------------------------------- 163 (321)
Q Consensus 164 -------------------------------------------------------------------------------- 163 (321)
T Consensus 174 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 174 YCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp EEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred eEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence
Q ss_pred ---eeCC--------------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCC
Q 020756 164 ---TRAE--------------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVS 223 (321)
Q Consensus 164 ---~~~~--------------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~ 223 (321)
+..+ .++.++|+|||++|++++. |+.|+|||+. ++++ +..+...+..++|+|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGS------DGRFSFWDKDARTKLKTSEQLDQPISACCFNHNG 327 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEET------TSCEEEEETTTTEEEEECCCCSSCEEEEEECTTS
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEEcc------CCeEEEEECCCCcEEEEecCCCCCceEEEECCCC
Confidence 1111 3778999999999999995 9999999996 4555 33466789999999999
Q ss_pred CCCCCC
Q 020756 224 PDKFGD 229 (321)
Q Consensus 224 ~~~~~~ 229 (321)
..++..
T Consensus 328 ~~l~~~ 333 (368)
T 3mmy_A 328 NIFAYA 333 (368)
T ss_dssp SCEEEE
T ss_pred CeEEEE
Confidence 888865
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.9e-18 Score=160.95 Aligned_cols=175 Identities=13% Similarity=0.148 Sum_probs=139.6
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|++|++.. ++.+.....+......+.|+|+|++|++.. . ...+++++............|
T Consensus 224 ~~~g~i~~~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~-----------d~~i~i~d~~~~~~~~~~~~~ 288 (425)
T 1r5m_A 224 GPKGAIFVYQITE---KTPTGKLIGHHGPISVLEFNDTNKLLLSAS-D-----------DGTLRIWHGGNGNSQNCFYGH 288 (425)
T ss_dssp CGGGCEEEEETTC---SSCSEEECCCSSCEEEEEEETTTTEEEEEE-T-----------TSCEEEECSSSBSCSEEECCC
T ss_pred cCCCeEEEEEcCC---CceeeeeccCCCceEEEEECCCCCEEEEEc-C-----------CCEEEEEECCCCccceEecCC
Confidence 3467899999998 677777766777888999999999877642 1 112556665544223333357
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
...|.++.|+|++ .|++ +..++.+.+||++. ..+..+ +...+.++.|+|+|++|++++ .+|.|++||+.++
T Consensus 289 ~~~i~~~~~~~~~-~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 289 SQSIVSASWVGDD-KVIS--CSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF---MDGQVNVYDLKKL 362 (425)
T ss_dssp SSCEEEEEEETTT-EEEE--EETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE---TTSCEEEEECHHH
T ss_pred CccEEEEEECCCC-EEEE--EeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE---CCCeEEEEECCCC
Confidence 8899999999999 6666 46689999999954 445444 678999999999999999998 8899999999988
Q ss_pred e--------------------EEEeeeCC----CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 159 K--------------------QLGTTRAE----CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 159 ~--------------------~i~~~~~~----~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
+ .+..+..+ .++.++|+|||++|++++. |+.++||++.|
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~iw~~~g 425 (425)
T 1r5m_A 363 NSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS------LQEGSVVAIPG 425 (425)
T ss_dssp HC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES------SSCCEEEECCC
T ss_pred ccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec------CceEEEEeecC
Confidence 7 88888876 7889999999999999994 99999999875
No 62
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.81 E-value=6.6e-18 Score=161.08 Aligned_cols=193 Identities=13% Similarity=0.046 Sum_probs=146.6
Q ss_pred CCceEEEEEcC--CcCCCCceeeee--cccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceee--
Q 020756 3 SPASVQIYACG--KDLQSQPLARRS--FFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGL-- 76 (321)
Q Consensus 3 ~p~~v~v~~~~--~~~~~~~i~~~~--~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~-- 76 (321)
..+.|+||++. . ++.+.... .+......+.|+|+|++|++... ...++.+++.......
T Consensus 123 ~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~------------~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 123 SDKSLLVFDVDKTS---KNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK------------FGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp GGTEEEEEEECSSS---SSCEEEEEEEECSSCEEEEEECTTSSEEEEEET------------TSEEEEEETTSCCCSSCC
T ss_pred CCCeEEEEECcCCC---CceeeeeecccCCCCceEEEEcCCCCEEEEEeC------------CCcEEEEecCCccccccc
Confidence 56899999998 6 56666554 34567789999999999877521 1235666654432221
Q ss_pred --eecCCCCCeEEEEECcC---CCEEEEEEccCCCeEEEEeCCC-ceeEE-e--CCcCeeeEEEcCCCCeEEEEccCCCC
Q 020756 77 --VPLRKEGPVHDVQWSYS---GSEFAVVYGFMPASATIFNKKC-RPILE-L--GSGPYNTVRWNPKGKFLCLAGFGNLP 147 (321)
Q Consensus 77 --v~l~~~~~v~~~~wsP~---g~~l~~~~g~~~~~i~i~d~~~-~~~~~-~--~~~~~~~~~~sPdG~~l~~~g~~n~~ 147 (321)
....|.+.|++++|+|+ +++|++. ..++.|.+||+.. ..+.. + |...+.++.|+ +|++|++++ .|
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~---~d 261 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITS--DRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG---GD 261 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEE--ETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE---SS
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEE--cCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe---CC
Confidence 22347899999999999 8888774 6788999999964 45555 3 67899999999 999999999 89
Q ss_pred CcEEEEECCCCeEEEeeeC---------------------------CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEe
Q 020756 148 GDMAFWDYVDGKQLGTTRA---------------------------ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFH 200 (321)
Q Consensus 148 g~i~iwD~~~~~~i~~~~~---------------------------~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~ 200 (321)
+.|+|||+.+++++..+.. ..+..+.|+|||++|++++. .++.|+||+
T Consensus 262 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-----~d~~i~iw~ 336 (450)
T 2vdu_B 262 DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE-----ATKCIIILE 336 (450)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET-----TCSEEEEEE
T ss_pred CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC-----CCCeEEEEE
Confidence 9999999999988777652 24678999999999999984 289999999
Q ss_pred e--c-C---cee--EEeccCceEEEEEecC
Q 020756 201 H--N-G---SLF--FKKMFDKLFQAEWKPV 222 (321)
Q Consensus 201 ~--~-g---~~l--~~~~~~~~~~~~w~P~ 222 (321)
+ . + ..+ ...+ ..+.++.|+|+
T Consensus 337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~ 365 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP-YNVISLSAHND 365 (450)
T ss_dssp ECSSSTTCEEEEEEEECS-SCEEEEEEETT
T ss_pred eccCCCCceeeccEeccC-CceEEEEecCC
Confidence 9 3 3 222 2223 78999999995
No 63
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.81 E-value=6.7e-18 Score=160.21 Aligned_cols=208 Identities=12% Similarity=0.024 Sum_probs=148.0
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGP 84 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~ 84 (321)
+.|+||++.. ..+....-.......+.|||+|++|++... +. +...|+++++.++....+ ..+.+.
T Consensus 159 ~~i~i~d~~g----~~~~~l~~~~~~v~~~~~Spdg~~la~~s~---~~------~~~~i~~~d~~tg~~~~l-~~~~~~ 224 (415)
T 2hqs_A 159 YELRVSDYDG----YNQFVVHRSPQPLMSPAWSPDGSKLAYVTF---ES------GRSALVIQTLANGAVRQV-ASFPRH 224 (415)
T ss_dssp EEEEEEETTS----CSCEEEEEESSCEEEEEECTTSSEEEEEEC---TT------SSCEEEEEETTTCCEEEE-ECCSSC
T ss_pred ceEEEEcCCC----CCCEEEeCCCCcceeeEEcCCCCEEEEEEe---cC------CCcEEEEEECCCCcEEEe-ecCCCc
Confidence 7899999864 334444445667889999999999988642 11 234588888876544333 356788
Q ss_pred eEEEEECcCCCEEEEEEc-cCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEE
Q 020756 85 VHDVQWSYSGSEFAVVYG-FMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQL 161 (321)
Q Consensus 85 v~~~~wsP~g~~l~~~~g-~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i 161 (321)
+.+++|||||+.|++... .....|.+||+.+.....+ +...+..+.|+|||++|++++..+....|++||+.+++..
T Consensus 225 ~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~ 304 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ 304 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE
T ss_pred ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE
Confidence 999999999999986532 2234799999977666666 5667899999999999999873222237888999887643
Q ss_pred Eee-eCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE-eccCceEEEEEecCCCCCCCC
Q 020756 162 GTT-RAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK-KMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 162 ~~~-~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~-~~~~~~~~~~w~P~~~~~~~~ 229 (321)
... ....+..++|||||++|++++... .+..+.+||+.+..+.. .....+..+.|+|++..++..
T Consensus 305 ~l~~~~~~~~~~~~spdG~~l~~~~~~~---g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 305 RITWEGSQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS 371 (415)
T ss_dssp ECCCSSSEEEEEEECTTSSEEEEEEECS---SCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEE
T ss_pred EEecCCCcccCeEECCCCCEEEEEECcC---CceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEE
Confidence 322 223677899999999999988410 12579999996544322 122378899999999877654
No 64
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.81 E-value=1.5e-18 Score=163.78 Aligned_cols=138 Identities=9% Similarity=0.148 Sum_probs=109.6
Q ss_pred cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEE--------e--CCcCeeeEEEcCCC-CeEEEEccCCC
Q 020756 79 LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILE--------L--GSGPYNTVRWNPKG-KFLCLAGFGNL 146 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~--------~--~~~~~~~~~~sPdG-~~l~~~g~~n~ 146 (321)
..|...|.+++|+|+|+.|++ + .|+.|.+||+. ...... + |...+.++.|+|+| ++|++++ .
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s--~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~---~ 247 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLS--A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS---S 247 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEE--E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE---T
T ss_pred cCCCcceEEEEEcCCCCEEEE--e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe---C
Confidence 458899999999999999888 4 48999999997 332222 2 67789999999999 8999998 8
Q ss_pred CCcEEEEECCCCeE----EEeeeCC--------------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec--Ccee
Q 020756 147 PGDMAFWDYVDGKQ----LGTTRAE--------------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN--GSLF 206 (321)
Q Consensus 147 ~g~i~iwD~~~~~~----i~~~~~~--------------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~--g~~l 206 (321)
++.|++||+++++. +..+..+ .+..++|+|||++|++++ ++.++|||+. ++.+
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-------~~~v~iwd~~~~~~~~ 320 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-------YLSVKVWDLNMENRPV 320 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-------SSEEEEEETTCCSSCS
T ss_pred CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-------CCeEEEEeCCCCcccc
Confidence 99999999998875 5666654 688999999999999988 5899999995 4444
Q ss_pred --EEeccC---------------ceEEEEEecCCCCCCCC
Q 020756 207 --FKKMFD---------------KLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 207 --~~~~~~---------------~~~~~~w~P~~~~~~~~ 229 (321)
+..+.. .+..++|+|++..+++.
T Consensus 321 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~ 360 (447)
T 3dw8_B 321 ETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTG 360 (447)
T ss_dssp CCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEE
T ss_pred ceeeccccccccccccccccccccceEEEECCCCCEEEEe
Confidence 333321 13348999999888754
No 65
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=2e-17 Score=153.62 Aligned_cols=203 Identities=10% Similarity=0.087 Sum_probs=151.6
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+ ++.+...... .....+.|+|+|++|++... ....|++++.... +....+...
T Consensus 10 ~d~~v~v~d~~~---~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~-----------~d~~i~v~d~~~~-~~~~~~~~~ 73 (391)
T 1l0q_A 10 ESDNISVIDVTS---NKVTATIPVG-SNPMGAVISPDGTKVYVANA-----------HSNDVSIIDTATN-NVIATVPAG 73 (391)
T ss_dssp TTTEEEEEETTT---TEEEEEEECS-SSEEEEEECTTSSEEEEEEG-----------GGTEEEEEETTTT-EEEEEEECS
T ss_pred CCCEEEEEECCC---CeEEEEeecC-CCcceEEECCCCCEEEEECC-----------CCCeEEEEECCCC-eEEEEEECC
Confidence 568999999988 6666655544 34678999999999877532 1224677777554 333334445
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeE
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQ 160 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~ 160 (321)
..+.+++|+|+|++|+++ +..++.|.+||+... .+..+ +...+..+.|+|+|++|++++ ..++.|++||+.+++.
T Consensus 74 ~~v~~~~~spdg~~l~~~-~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVT-NMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTN--NGDKTVSVINTVTKAV 150 (391)
T ss_dssp SSEEEEEECTTSSEEEEE-ETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEE--TTTTEEEEEETTTTEE
T ss_pred CCccceEECCCCCEEEEE-ECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEe--CCCCEEEEEECCCCcE
Confidence 599999999999988776 455789999999654 44444 556789999999999885544 1679999999999998
Q ss_pred EEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-eeEE-eccCceEEEEEecCCCCCCCC
Q 020756 161 LGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LFFK-KMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 161 i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l~~-~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+..+..+ .+..++|+|||++|+.+.. .++.+++||+... .+.. .+...+..+.|+|+...++..
T Consensus 151 ~~~~~~~~~~~~~~~~~dg~~l~~~~~-----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 151 INTVSVGRSPKGIAVTPDGTKVYVANF-----DSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVT 217 (391)
T ss_dssp EEEEECCSSEEEEEECTTSSEEEEEET-----TTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEE
T ss_pred EEEEecCCCcceEEECCCCCEEEEEeC-----CCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEE
Confidence 8887765 7788999999999866554 3789999999544 3322 344578889999998777643
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.81 E-value=4.5e-19 Score=164.00 Aligned_cols=184 Identities=10% Similarity=0.135 Sum_probs=132.7
Q ss_pred ecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccC
Q 020756 25 SFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFM 104 (321)
Q Consensus 25 ~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~ 104 (321)
.+++..+..+.|+|+|++|++.. ..|...||.+.............|.+.|.+++|+|+|++|+++ ..
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~--s~ 75 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTT----------ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTC--SQ 75 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCC----------SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEE--ET
T ss_pred ecCCCcEEEEEECCCCCEEEEec----------CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEE--eC
Confidence 44556788999999999886631 1133345555422101222223588999999999999999885 66
Q ss_pred CCeEEEEeCCCce----eEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe---EEEeeeC-C--CeeeE
Q 020756 105 PASATIFNKKCRP----ILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK---QLGTTRA-E--CSVTS 172 (321)
Q Consensus 105 ~~~i~i~d~~~~~----~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~---~i~~~~~-~--~~~~~ 172 (321)
|+.+.+||+.... ...+ |...+.++.|+|+|++|++++ .++.|++||+++++ .+..+.. | .+.++
T Consensus 76 d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS---GARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp TSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE---SSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred CCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe---cCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 8899999996543 5555 788999999999999999999 89999999998876 3555654 4 78999
Q ss_pred EEccCCCEEEEEEcCCceeecCcEEEEeec-------------------CceeEE-eccCceEEEEEecCCCCCCCC
Q 020756 173 EWSPDGRYFMTATTAPRLQIDNGIKIFHHN-------------------GSLFFK-KMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 173 ~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-------------------g~~l~~-~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+|+|||++|++++. |+.++|||+. ++++.. .|...+..+.|+|++..++..
T Consensus 153 ~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 223 (377)
T 3dwl_C 153 DWHPNNVLLAAGCA------DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA 223 (377)
T ss_dssp EECTTSSEEEEEES------SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE
T ss_pred EEcCCCCEEEEEeC------CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE
Confidence 99999999999994 9999999984 333322 566789999999999877755
No 67
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.81 E-value=1.7e-17 Score=150.44 Aligned_cols=203 Identities=18% Similarity=0.200 Sum_probs=155.5
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee-cC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP-LR 80 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~-l~ 80 (321)
+..+.|++|+... ................+.|++++..|+... . | + .+.+++..+....... ..
T Consensus 105 ~~d~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s-~--d-------~--~~~~~d~~~~~~~~~~~~~ 169 (340)
T 4aow_A 105 SWDGTLRLWDLTT---GTTTRRFVGHTKDVLSVAFSSDNRQIVSGS-R--D-------K--TIKLWNTLGVCKYTVQDES 169 (340)
T ss_dssp ETTSEEEEEETTT---TEEEEEEECCSSCEEEEEECTTSSCEEEEE-T--T-------S--CEEEECTTSCEEEEECSSS
T ss_pred cccccceEEeecc---cceeeeecCCCCceeEEEEeecCccceeec-C--C-------C--eEEEEEeCCCceEEEEecc
Confidence 3567899999988 566666666677788889999999887642 1 1 1 2444555444332222 34
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD 157 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~ 157 (321)
|...+..++|++++...+++.+..++.+.+||++.. .+..+ |...++++.|+|+|++|++++ .|+.|.+||+.+
T Consensus 170 ~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s---~Dg~i~iwd~~~ 246 (340)
T 4aow_A 170 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG---KDGQAMLWDLNE 246 (340)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE---TTCEEEEEETTT
T ss_pred ccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe---CCCeEEEEEecc
Confidence 788999999999877555444677899999999654 44555 788999999999999999999 899999999999
Q ss_pred CeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee-E-----------EeccCceEEEEEecCCC
Q 020756 158 GKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF-F-----------KKMFDKLFQAEWKPVSP 224 (321)
Q Consensus 158 ~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l-~-----------~~~~~~~~~~~w~P~~~ 224 (321)
.+++..+..+ .+..+.|+|++.+++.+. |+.++|||+.+..+ . ..+...|..++|+|++.
T Consensus 247 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~ 319 (340)
T 4aow_A 247 GKHLYTLDGGDIINALCFSPNRYWLCAAT-------GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ 319 (340)
T ss_dssp TEEEEEEECSSCEEEEEECSSSSEEEEEE-------TTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS
T ss_pred CceeeeecCCceEEeeecCCCCceeeccC-------CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC
Confidence 9999888876 788899999998776655 99999999976543 1 13556899999999998
Q ss_pred CCCCC
Q 020756 225 DKFGD 229 (321)
Q Consensus 225 ~~~~~ 229 (321)
.+++.
T Consensus 320 ~l~sg 324 (340)
T 4aow_A 320 TLFAG 324 (340)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 68
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.80 E-value=2.3e-18 Score=159.98 Aligned_cols=203 Identities=9% Similarity=0.068 Sum_probs=150.7
Q ss_pred CCCceEEEEEcCCcCCCC------ceeeeecccCccceEEeCCC----C---CeeEEEEEecccCCCceeecceeEEEEE
Q 020756 2 GSPASVQIYACGKDLQSQ------PLARRSFFRCSTVQLNWNRG----S---TGLLAVAQSDVDKTNQSYYGESKLNYLT 68 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~------~i~~~~~f~~~~~~~~Wsp~----G---~~l~~~~~~d~d~t~~s~~g~~~l~~l~ 68 (321)
+..+.|+||++.. ++ .+.....+...+..+.|+|+ | ++|+... . .|...+|.+.
T Consensus 33 ~~dg~i~iw~~~~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~-~---------dg~i~iw~~~ 99 (397)
T 1sq9_A 33 SGDGYLKVWDNKL---LDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS-F---------SGDLLFYRIT 99 (397)
T ss_dssp ETTSEEEEEESBC---CTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE-T---------TSCEEEEEEE
T ss_pred cCCCEEEEEECCC---cccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc-C---------CCCEEEEEcc
Confidence 4578999999998 44 56666667778889999999 8 7776642 1 1333344443
Q ss_pred cCCCce---eeeecCC-----CCCeEEEEEC----cCCCE-EEEEEccCCCeEEEEeCCC-------ceeE-----Ee--
Q 020756 69 TDGTHE---GLVPLRK-----EGPVHDVQWS----YSGSE-FAVVYGFMPASATIFNKKC-------RPIL-----EL-- 121 (321)
Q Consensus 69 ~~g~~~---~~v~l~~-----~~~v~~~~ws----P~g~~-l~~~~g~~~~~i~i~d~~~-------~~~~-----~~-- 121 (321)
...... ......+ .+.|.+++|+ |+++. |+++ ..++.|.+||+.. ..+. .+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 177 (397)
T 1sq9_A 100 REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT--DVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 177 (397)
T ss_dssp ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE--ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEE
T ss_pred CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEE--eCCCcEEEEeCCccccccccceeeccCcceeee
Confidence 322100 1122234 4899999999 99998 7774 6688999999865 3333 33
Q ss_pred -------CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeC-------C-CeeeEEEccCCCEEEEEEc
Q 020756 122 -------GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA-------E-CSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 122 -------~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~-------~-~~~~~~wSpdG~~l~t~~s 186 (321)
+...+.++.|+|+| +|++++ .++.|.+||+++++.+..+.. . .+..++|+|+|++|++++.
T Consensus 178 ~~~~~~~~~~~i~~~~~~~~~-~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~ 253 (397)
T 1sq9_A 178 TVESPMTPSQFATSVDISERG-LIATGF---NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD 253 (397)
T ss_dssp EECCSSSSCCCCCEEEECTTS-EEEEEC---TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEE
T ss_pred eeccccCCCCCceEEEECCCc-eEEEEe---CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEec
Confidence 57789999999999 888888 889999999999998888775 3 6889999999999999994
Q ss_pred CCceeec---CcEEEEee-cCcee--EEe-------------ccCceEEEEEecCCCCCCCC
Q 020756 187 APRLQID---NGIKIFHH-NGSLF--FKK-------------MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 187 ~~rl~~d---~~v~iw~~-~g~~l--~~~-------------~~~~~~~~~w~P~~~~~~~~ 229 (321)
| +.|+|||+ +++.+ +.. +...+..+.|+|+...++..
T Consensus 254 ------d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 254 ------SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp ------ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred ------CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEE
Confidence 8 89999998 45555 333 66789999999998877765
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.80 E-value=2.6e-18 Score=159.54 Aligned_cols=186 Identities=13% Similarity=0.159 Sum_probs=142.1
Q ss_pred ceeeeecccCccceEEeCCCC-CeeEEEEEecccCCCceeecceeEEEEEcCCCcee-eeec-CCCCCeEEEEECc-CCC
Q 020756 20 PLARRSFFRCSTVQLNWNRGS-TGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG-LVPL-RKEGPVHDVQWSY-SGS 95 (321)
Q Consensus 20 ~i~~~~~f~~~~~~~~Wsp~G-~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~-~v~l-~~~~~v~~~~wsP-~g~ 95 (321)
.+.....+...+..+.|+|+| ++|+.. ..| |. +.+++....... .+.. .|.+.|.+++|+| +++
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~d---------g~--i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 132 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVG-SKG---------GD--IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTN 132 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEE-EBT---------SC--EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEE-cCC---------Ce--EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCC
Confidence 344455566788899999999 555543 221 22 555666544222 2222 4889999999999 667
Q ss_pred EEEEEEccCCCeEEEEeCCCceeEEe-----CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--C
Q 020756 96 EFAVVYGFMPASATIFNKKCRPILEL-----GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--C 168 (321)
Q Consensus 96 ~l~~~~g~~~~~i~i~d~~~~~~~~~-----~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~ 168 (321)
.|+++ ..++.|.+||+.+..+..+ +...+.++.|+|+|++|++++ .++.|++||+ +++.+..+..| .
T Consensus 133 ~l~s~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~-~~~~~~~~~~h~~~ 206 (383)
T 3ei3_B 133 QLFVS--SIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD---STGRLLLLGL-DGHEIFKEKLHKAK 206 (383)
T ss_dssp EEEEE--ETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE---TTSEEEEEET-TSCEEEEEECSSSC
T ss_pred EEEEE--eCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC---CCCCEEEEEC-CCCEEEEeccCCCc
Confidence 77774 6689999999988776666 236699999999999999999 8999999999 56677777765 7
Q ss_pred eeeEEEccCCC-EEEEEEcCCceeecCcEEEEeec-----Ccee-EEeccCceEEEEEec-CCCCCCCC
Q 020756 169 SVTSEWSPDGR-YFMTATTAPRLQIDNGIKIFHHN-----GSLF-FKKMFDKLFQAEWKP-VSPDKFGD 229 (321)
Q Consensus 169 ~~~~~wSpdG~-~l~t~~s~~rl~~d~~v~iw~~~-----g~~l-~~~~~~~~~~~~w~P-~~~~~~~~ 229 (321)
+..++|+|+|+ +|++++. |+.++|||+. +..+ ...+...+..+.|+| ++..++..
T Consensus 207 v~~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSSV------DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp EEEEEECSSCTTEEEEEET------TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEE
T ss_pred EEEEEECCCCCCEEEEEeC------CCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEE
Confidence 89999999999 8888884 9999999995 4444 335778999999999 88777754
No 70
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.80 E-value=3.6e-18 Score=155.75 Aligned_cols=199 Identities=11% Similarity=0.165 Sum_probs=145.8
Q ss_pred CCceEEEEEcCCcCCCC-ceeeeecccCccceEE------eCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee
Q 020756 3 SPASVQIYACGKDLQSQ-PLARRSFFRCSTVQLN------WNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG 75 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~-~i~~~~~f~~~~~~~~------Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~ 75 (321)
..+.|+||++.. ++ ++.....+......+. |+++|+.|+... .| | .+.+++.......
T Consensus 88 ~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~-~d---------~--~i~vwd~~~~~~~ 152 (357)
T 3i2n_A 88 FGGNLHIWNLEA---PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS-RD---------G--TVKVWDPRQKDDP 152 (357)
T ss_dssp TTSCEEEECTTS---CSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE-TT---------S--CEEEECTTSCSSC
T ss_pred CCCeEEEEeCCC---CCccEEEEEecccceEEEeeccccccCCCccEEEEEe-CC---------C--eEEEEeCCCCCCc
Confidence 468899999998 45 6766666677777774 578999887642 11 2 2555555443212
Q ss_pred eeec-CC----CCCeEEEE----ECcCCCEEEEEEccCCCeEEEEeCCCceeEE-e-CCcCeeeEEEcC---CCCeEEEE
Q 020756 76 LVPL-RK----EGPVHDVQ----WSYSGSEFAVVYGFMPASATIFNKKCRPILE-L-GSGPYNTVRWNP---KGKFLCLA 141 (321)
Q Consensus 76 ~v~l-~~----~~~v~~~~----wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~-~-~~~~~~~~~~sP---dG~~l~~~ 141 (321)
...+ .+ ...|.++. |+|+++.|++. ..++.+.+||++...... . +...+.++.|+| ++++|+++
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 230 (357)
T 3i2n_A 153 VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG--YDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVAT 230 (357)
T ss_dssp SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE--ETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEE
T ss_pred ceeccccCCCCCCceEEEEEEeccCCCCCEEEEE--ccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEE
Confidence 2222 12 34889998 78999998884 668899999997654433 3 788999999999 99999999
Q ss_pred ccCCCCCcEEEEECCCCeEEEeee-----CC--CeeeEEEccCCC-EEEEEEcCCceeecCcEEEEeecC----------
Q 020756 142 GFGNLPGDMAFWDYVDGKQLGTTR-----AE--CSVTSEWSPDGR-YFMTATTAPRLQIDNGIKIFHHNG---------- 203 (321)
Q Consensus 142 g~~n~~g~i~iwD~~~~~~i~~~~-----~~--~~~~~~wSpdG~-~l~t~~s~~rl~~d~~v~iw~~~g---------- 203 (321)
+ .+|.|++||+++++.+..+. .+ .++.++|+|+|+ +|++++. |+.++|||+..
T Consensus 231 ~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 231 S---LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG------AGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp E---STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET------TSEEEEEEEECCSCC--CCTT
T ss_pred C---CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC------CCcEEEeecCCCcccccccCC
Confidence 8 89999999998765443332 44 789999999999 7888884 99999999852
Q ss_pred ----------cee--EEeccCceEEEEEecCCCCCC
Q 020756 204 ----------SLF--FKKMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 204 ----------~~l--~~~~~~~~~~~~w~P~~~~~~ 227 (321)
..+ ...|...+..+.|+|+...++
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 337 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC 337 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEE
Confidence 123 445677899999999998887
No 71
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.80 E-value=1.6e-17 Score=157.03 Aligned_cols=227 Identities=13% Similarity=0.182 Sum_probs=161.5
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecc--cCccceEEeCCCCCeeEEEEEecc-----c-CCCcee---------------
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFF--RCSTVQLNWNRGSTGLLAVAQSDV-----D-KTNQSY--------------- 58 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f--~~~~~~~~Wsp~G~~l~~~~~~d~-----d-~t~~s~--------------- 58 (321)
|..+.|+||++.+ ++.+....+. ...+..+.|+|+|++|++... |. | .+++..
T Consensus 122 gld~tV~lWd~~t---g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~-Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~ 197 (420)
T 4gga_A 122 ALDNSVYLWSASS---GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-SAEVQLWDVQQQKRLRNMTSHSARVGSLSW 197 (420)
T ss_dssp EETTEEEEEETTT---CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-TSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EeCCEEEEEECCC---CCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeCCCCceEEEee
Confidence 5678999999998 6666555543 345789999999999877531 10 0 011100
Q ss_pred --------ecceeEEEEEcCCCcee-eeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-----eeEEe--C
Q 020756 59 --------YGESKLNYLTTDGTHEG-LVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-----PILEL--G 122 (321)
Q Consensus 59 --------~g~~~l~~l~~~g~~~~-~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-----~~~~~--~ 122 (321)
.....++.++....... .....|...+..+.|+|+|+++++. ..|+.+.+||.... .+..+ +
T Consensus 198 ~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~--~~D~~v~i~~~~~~~~~~~~~~~~~~~ 275 (420)
T 4gga_A 198 NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG--GNDNLVNVWPSAPGEGGWVPLQTFTQH 275 (420)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE--ETTSCEEEEESSCCSSCSCCSEEECCC
T ss_pred CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeee--eccccceEEeeccccccceeeeeeccc
Confidence 00111222222222111 1123478899999999999999885 66889999998532 23333 6
Q ss_pred CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee
Q 020756 123 SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 123 ~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
...+.++.|+|++..+++.+.+..|+.|+|||+.+++++..+..+ .+..+.|+|+++.|++++.. .|+.|+|||+
T Consensus 276 ~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~----~d~~I~iwd~ 351 (420)
T 4gga_A 276 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF----AQNQLVIWKY 351 (420)
T ss_dssp SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECT----TTCCEEEEET
T ss_pred CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEec----CCCEEEEEEC
Confidence 788999999998877766554557899999999999998888776 78889999999999988632 3899999999
Q ss_pred -cCcee--EEeccCceEEEEEecCCCCCCCCc-chhhhccc
Q 020756 202 -NGSLF--FKKMFDKLFQAEWKPVSPDKFGDI-SELIKSVG 238 (321)
Q Consensus 202 -~g~~l--~~~~~~~~~~~~w~P~~~~~~~~~-~~~~~~~~ 238 (321)
+++++ +.+|...|..++|+|++..+++.. |...+.|.
T Consensus 352 ~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 352 PTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 56666 556888999999999999888763 44444443
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.9e-18 Score=169.25 Aligned_cols=200 Identities=11% Similarity=0.121 Sum_probs=142.1
Q ss_pred CCceEEEEEcCCcCCCCcee----eeecccCccceEEeCCC------CCeeEEEEEecccCCCceeecceeEEEEEcCCC
Q 020756 3 SPASVQIYACGKDLQSQPLA----RRSFFRCSTVQLNWNRG------STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT 72 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~----~~~~f~~~~~~~~Wsp~------G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~ 72 (321)
.++.|+||++.. ++... ........+..+.|+|+ |..|+. ++.| |. +.++++...
T Consensus 181 ~D~tI~iWd~~~---~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs-~s~D---------gt--vrlWd~~~~ 245 (524)
T 2j04_B 181 HSSCIQIFKMNT---STLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSF-VSQE---------GT--INFLEIIDN 245 (524)
T ss_dssp -CEEEEEEEEET---TTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEE-EETT---------SC--EEEEECCCC
T ss_pred CCceEEEEEccC---CCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEE-EecC---------Ce--EEEEEcCCC
Confidence 578899999977 44322 12223456778999997 344443 3221 33 334444332
Q ss_pred cee----------e-eecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC--ceeE--EeCCcCeeeE--EEcCCC
Q 020756 73 HEG----------L-VPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC--RPIL--ELGSGPYNTV--RWNPKG 135 (321)
Q Consensus 73 ~~~----------~-v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~--~~~~--~~~~~~~~~~--~~sPdG 135 (321)
... . ....|...|.+++|+|++ .|++ |..|++|.+||++. .+.. ..|...|.++ .|+|+|
T Consensus 246 ~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~las--gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g 322 (524)
T 2j04_B 246 ATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVC--GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFE 322 (524)
T ss_dssp SSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEE--EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTS
T ss_pred ccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEE--EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCC
Confidence 110 1 112477899999999865 5665 67799999999964 2333 3488999999 689998
Q ss_pred -CeEEEEccCCCCCcEEEEECCCCeEEEeeeCC----CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--E
Q 020756 136 -KFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE----CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--F 207 (321)
Q Consensus 136 -~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~----~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~ 207 (321)
++|++++ .|++|+|||+++++++..+..+ .+..++|||+|+.|++++. |+.++|||+. +.++ +
T Consensus 323 ~~~laS~S---~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~------d~tv~lwd~~~~~~~~~l 393 (524)
T 2j04_B 323 DTVVSTVA---VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG------ASSLRAVPSRAAFAVHPL 393 (524)
T ss_dssp CCEEEEEE---TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECS------SSEEEEEETTCTTCCEEE
T ss_pred CeEEEEec---cCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCC------CCcEEEEECcccccceee
Confidence 8999999 9999999999887655444332 4678999999999998884 8899999984 4433 5
Q ss_pred EeccCceEEEEEecCCCCCCCC
Q 020756 208 KKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 208 ~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
..|...|+.++|+|+++.+++.
T Consensus 394 ~gH~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 394 VSRETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp EECSSCEEEEECCSSCCBCEEE
T ss_pred ecCCCceEEEEeCCCCCeEEEE
Confidence 5788899999999999888765
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.80 E-value=7.1e-18 Score=171.29 Aligned_cols=199 Identities=12% Similarity=0.147 Sum_probs=157.4
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceeeeecC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGLVPLR 80 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~v~l~ 80 (321)
+..+.|+||++.+ ++.+.....+......+.|+|+|++|++.. .| | .+.+++.... ........
T Consensus 74 ~~dg~i~vw~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d---------g--~i~vw~~~~~~~~~~~~~~ 138 (814)
T 3mkq_A 74 SDDFRIRVFNYNT---GEKVVDFEAHPDYIRSIAVHPTKPYVLSGS-DD---------L--TVKLWNWENNWALEQTFEG 138 (814)
T ss_dssp ETTSEEEEEETTT---CCEEEEEECCSSCEEEEEECSSSSEEEEEE-TT---------S--EEEEEEGGGTSEEEEEEEC
T ss_pred eCCCeEEEEECCC---CcEEEEEecCCCCEEEEEEeCCCCEEEEEc-CC---------C--EEEEEECCCCceEEEEEcC
Confidence 3578999999998 778887777788899999999999987642 11 2 2455555443 22333345
Q ss_pred CCCCeEEEEECc-CCCEEEEEEccCCCeEEEEeCCC-ceeEEe--C-CcCeeeEEEcC--CCCeEEEEccCCCCCcEEEE
Q 020756 81 KEGPVHDVQWSY-SGSEFAVVYGFMPASATIFNKKC-RPILEL--G-SGPYNTVRWNP--KGKFLCLAGFGNLPGDMAFW 153 (321)
Q Consensus 81 ~~~~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~-~~~~~~~~~sP--dG~~l~~~g~~n~~g~i~iw 153 (321)
|..+|.+++|+| ++..|++. ..++.|.+||+.. .....+ + ...+..+.|+| +|++|++++ .+|.|.+|
T Consensus 139 ~~~~v~~~~~~p~~~~~l~~~--~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~dg~i~~~ 213 (814)
T 3mkq_A 139 HEHFVMCVAFNPKDPSTFASG--CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS---DDLTIKIW 213 (814)
T ss_dssp CSSCEEEEEEETTEEEEEEEE--ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC---TTSEEEEE
T ss_pred CCCcEEEEEEEcCCCCEEEEE--eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe---CCCEEEEE
Confidence 889999999999 78787774 6689999999853 344444 3 47899999999 999999998 89999999
Q ss_pred ECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCCC
Q 020756 154 DYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPDK 226 (321)
Q Consensus 154 D~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~~ 226 (321)
|+.+++.+..+..| .+..++|+|+|++|++++. |+.++|||+. ++.+ ...+...++.++|+|++..+
T Consensus 214 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 214 DYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE------DGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET------TSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 99999998888866 7889999999999999994 9999999995 4555 33455789999999998754
No 74
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.80 E-value=1.3e-17 Score=150.25 Aligned_cols=181 Identities=13% Similarity=0.213 Sum_probs=131.5
Q ss_pred CCCceEEEEEcCCcCCC-CceeeeecccCccceEEeCC--CCCeeEEEEEecccCCCceeecceeEEEEEcCCC------
Q 020756 2 GSPASVQIYACGKDLQS-QPLARRSFFRCSTVQLNWNR--GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT------ 72 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~-~~i~~~~~f~~~~~~~~Wsp--~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~------ 72 (321)
+..+.|+||++...... +.+.....+......+.|+| +|++|+... .| |...+|.+.....
T Consensus 30 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~-~d---------g~v~vwd~~~~~~~~~~~~ 99 (351)
T 3f3f_A 30 SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS-YD---------KTVKLWEEDPDQEECSGRR 99 (351)
T ss_dssp ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE-TT---------SCEEEEEECTTSCTTSSCS
T ss_pred eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc-CC---------CeEEEEecCCCcccccccC
Confidence 35789999999873100 23444455677889999999 577776642 11 3333444432211
Q ss_pred -ceeeeecCCCCCeEEEEECcC--CCEEEEEEccCCCeEEEEeCCCce--------------------------------
Q 020756 73 -HEGLVPLRKEGPVHDVQWSYS--GSEFAVVYGFMPASATIFNKKCRP-------------------------------- 117 (321)
Q Consensus 73 -~~~~v~l~~~~~v~~~~wsP~--g~~l~~~~g~~~~~i~i~d~~~~~-------------------------------- 117 (321)
........|.+.|.+++|+|+ ++.|+++ ..++.+.+||++...
T Consensus 100 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 177 (351)
T 3f3f_A 100 WNKLCTLNDSKGSLYSVKFAPAHLGLKLACL--GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCP 177 (351)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEE--ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECC
T ss_pred cceeeeecccCCceeEEEEcCCCCCcEEEEe--cCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEecc
Confidence 112222357899999999999 9988885 668899999974210
Q ss_pred -----------------------------eEEe--CCcCeeeEEEcCCC----CeEEEEccCCCCCcEEEEECCCC----
Q 020756 118 -----------------------------ILEL--GSGPYNTVRWNPKG----KFLCLAGFGNLPGDMAFWDYVDG---- 158 (321)
Q Consensus 118 -----------------------------~~~~--~~~~~~~~~~sPdG----~~l~~~g~~n~~g~i~iwD~~~~---- 158 (321)
+..+ |...+.++.|+|+| ++|++++ .||.|++||+.++
T Consensus 178 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~ 254 (351)
T 3f3f_A 178 SRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC---KDGRIRIFKITEKLSPL 254 (351)
T ss_dssp CSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE---TTSCEEEEEEEECC---
T ss_pred CCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc---CCCeEEEEeCCCCcCcc
Confidence 2333 56789999999998 7899998 8999999999864
Q ss_pred ------------------------------------------eEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecC
Q 020756 159 ------------------------------------------KQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDN 194 (321)
Q Consensus 159 ------------------------------------------~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~ 194 (321)
+.+..+..| .++.++|+|||++|++++. |+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------dg 328 (351)
T 3f3f_A 255 ASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGD------DG 328 (351)
T ss_dssp ------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEET------TS
T ss_pred ccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecC------CC
Confidence 566666665 7899999999999999995 99
Q ss_pred cEEEEeecC
Q 020756 195 GIKIFHHNG 203 (321)
Q Consensus 195 ~v~iw~~~g 203 (321)
.|+||+++.
T Consensus 329 ~v~iw~~~~ 337 (351)
T 3f3f_A 329 KVRLWKATY 337 (351)
T ss_dssp CEEEEEECT
T ss_pred cEEEEecCc
Confidence 999999953
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.79 E-value=5.5e-18 Score=172.08 Aligned_cols=201 Identities=11% Similarity=0.082 Sum_probs=158.7
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+ ++.+............+.|+|+|++|++... ...+.+++............|.
T Consensus 33 ~~g~v~iwd~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------------dg~i~vw~~~~~~~~~~~~~~~ 97 (814)
T 3mkq_A 33 YSGRVEIWNYET---QVEVRSIQVTETPVRAGKFIARKNWIIVGSD------------DFRIRVFNYNTGEKVVDFEAHP 97 (814)
T ss_dssp TTSEEEEEETTT---TEEEEEEECCSSCEEEEEEEGGGTEEEEEET------------TSEEEEEETTTCCEEEEEECCS
T ss_pred CCCEEEEEECCC---CceEEEEecCCCcEEEEEEeCCCCEEEEEeC------------CCeEEEEECCCCcEEEEEecCC
Confidence 468999999998 7788888878888999999999999887531 1235666665443333333588
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc--eeEEe--CCcCeeeEEEcC-CCCeEEEEccCCCCCcEEEEECCC
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR--PILEL--GSGPYNTVRWNP-KGKFLCLAGFGNLPGDMAFWDYVD 157 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~--~~~~~--~~~~~~~~~~sP-dG~~l~~~g~~n~~g~i~iwD~~~ 157 (321)
+.|.+++|+|+|+.|+++ ..++.+.+||+... ....+ |...+.++.|+| +|++|++++ .+|.|.+||+.+
T Consensus 98 ~~v~~~~~s~~~~~l~~~--~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~---~dg~v~vwd~~~ 172 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSG--SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC---LDRTVKVWSLGQ 172 (814)
T ss_dssp SCEEEEEECSSSSEEEEE--ETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE---TTSEEEEEETTC
T ss_pred CCEEEEEEeCCCCEEEEE--cCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe---CCCeEEEEECCC
Confidence 999999999999998874 66889999999653 33344 788999999999 899999998 899999999987
Q ss_pred CeEEEeeeC---CCeeeEEEcc--CCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCCCCCC
Q 020756 158 GKQLGTTRA---ECSVTSEWSP--DGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 158 ~~~i~~~~~---~~~~~~~wSp--dG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
++....+.. ..+..++|+| +|.+|++++. |+.+++||+. +..+ ...+...+..+.|+|+...++..
T Consensus 173 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 173 STPNFTLTTGQERGVNYVDYYPLPDKPYMITASD------DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT------TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC------CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 765555443 3688899999 9999999995 8999999985 4444 44567789999999998876654
No 76
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2e-18 Score=168.42 Aligned_cols=191 Identities=16% Similarity=0.193 Sum_probs=133.6
Q ss_pred eeeecccCccceEEeCCCCCeeEEEEEecc----cCCCcee-ecceeEEEE--E---------cC-CCceeeeecCCCCC
Q 020756 22 ARRSFFRCSTVQLNWNRGSTGLLAVAQSDV----DKTNQSY-YGESKLNYL--T---------TD-GTHEGLVPLRKEGP 84 (321)
Q Consensus 22 ~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~----d~t~~s~-~g~~~l~~l--~---------~~-g~~~~~v~l~~~~~ 84 (321)
..+.-|...+..+.|||||+.++.. +.|. .+.++.. .....++.+ . .. +.....+.+.++..
T Consensus 9 ~~~~~~~~~v~sv~~SpDG~~iASa-s~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T 2j04_A 9 VDRKEFEDWKNNLTWARDGTLYLTT-FPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCY 87 (588)
T ss_dssp ECSCCCSSSSCCEEECTTSCEEEEC-SSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCC
T ss_pred ccHhHhhccEEEEEECCCCCEEEEE-cCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCc
Confidence 3455567889999999999998773 1110 0111100 011123333 1 11 12123344456889
Q ss_pred eEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe-CCc-----CeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 85 VHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL-GSG-----PYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 85 v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~-~~~-----~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
|.+++|||+|+.||++ ..++.+.|||..+ .+..+ |.. .+.+++|||||++|++++ .||+|+|||+.++
T Consensus 88 V~~vawSPdG~~LAs~--s~dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs---~DGtVkIWd~~~~ 161 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVL--SNNGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGN---EDGELQFFSIRKN 161 (588)
T ss_dssp EEEEEECSSSSCEEEE--ETTSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEE---TTSEEEEEECCCC
T ss_pred EEEEEECCCCCEEEEE--eCCCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEc---CCCEEEEEECCCC
Confidence 9999999999999996 6689999999755 44444 343 499999999999999999 9999999999887
Q ss_pred e-------EEEee----eCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee------E-EeccCceEEEE
Q 020756 159 K-------QLGTT----RAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF------F-KKMFDKLFQAE 218 (321)
Q Consensus 159 ~-------~i~~~----~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l------~-~~~~~~~~~~~ 218 (321)
. .+.++ .+| .+.+++||||| |++++. |+.+++|++.++.+ . ..|...|.+++
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~------D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS------NNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET------TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC------CCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 4 35555 333 78999999999 667664 99999999977653 2 35667899999
Q ss_pred EecCCCCCCCC
Q 020756 219 WKPVSPDKFGD 229 (321)
Q Consensus 219 w~P~~~~~~~~ 229 (321)
|+ +..+++.
T Consensus 234 Fs--g~~LASa 242 (588)
T 2j04_A 234 IV--DYKVVLT 242 (588)
T ss_dssp EE--TTEEEEE
T ss_pred EE--CCEEEEE
Confidence 99 4555544
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.79 E-value=2.3e-18 Score=157.30 Aligned_cols=200 Identities=13% Similarity=0.091 Sum_probs=152.4
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee--
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP-- 78 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~-- 78 (321)
+..+.|+||++.+ ++.+.....+......+.|+| +++.|+... .| | .|++++..........
T Consensus 92 ~~dg~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~-~d---------g--~i~iwd~~~~~~~~~~~~ 156 (366)
T 3k26_A 92 GSRGIIRIINPIT---MQCIKHYVGHGNAINELKFHPRDPNLLLSVS-KD---------H--ALRLWNIQTDTLVAIFGG 156 (366)
T ss_dssp ETTCEEEEECTTT---CCEEEEEESCCSCEEEEEECSSCTTEEEEEE-TT---------S--CEEEEETTTTEEEEEECS
T ss_pred cCCCEEEEEEchh---ceEeeeecCCCCcEEEEEECCCCCCEEEEEe-CC---------C--eEEEEEeecCeEEEEecc
Confidence 3568999999998 777877777788899999999 777776642 11 2 2566666554222222
Q ss_pred -cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCce-e----------------------------EEe--CCcCe
Q 020756 79 -LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRP-I----------------------------LEL--GSGPY 126 (321)
Q Consensus 79 -l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~-~----------------------------~~~--~~~~~ 126 (321)
..|...|.+++|+|+|+.|++. ..++.+.+||++... + ... +...+
T Consensus 157 ~~~~~~~v~~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 234 (366)
T 3k26_A 157 VEGHRDEVLSADYDLLGEKIMSC--GMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYV 234 (366)
T ss_dssp TTSCSSCEEEEEECTTSSEEEEE--ETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCC
T ss_pred cccccCceeEEEECCCCCEEEEe--cCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceE
Confidence 3588999999999999999885 568899999986431 1 111 67889
Q ss_pred eeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe--------------EEEeeeCC--CeeeEEEccC--CCEEEEEEcCC
Q 020756 127 NTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK--------------QLGTTRAE--CSVTSEWSPD--GRYFMTATTAP 188 (321)
Q Consensus 127 ~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~--------------~i~~~~~~--~~~~~~wSpd--G~~l~t~~s~~ 188 (321)
.++.|+ |++|++++ .++.|.+||+.++. .+..+..+ .+..++|+|| |++|++++.
T Consensus 235 ~~~~~~--~~~l~~~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~-- 307 (366)
T 3k26_A 235 DCVRWL--GDLILSKS---CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ-- 307 (366)
T ss_dssp CEEEEE--TTEEEEEC---SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT--
T ss_pred EEEEEc--CCEEEEEe---cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec--
Confidence 999999 78999998 89999999988763 36666655 6888999999 999999984
Q ss_pred ceeecCcEEEEeecCc-----ee--EEec--cCceEEEEEecCCCCCCCC
Q 020756 189 RLQIDNGIKIFHHNGS-----LF--FKKM--FDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 189 rl~~d~~v~iw~~~g~-----~l--~~~~--~~~~~~~~w~P~~~~~~~~ 229 (321)
|+.|+|||+... .+ ...+ ...+..+.|+|++..+++.
T Consensus 308 ----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 353 (366)
T 3k26_A 308 ----VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 353 (366)
T ss_dssp ----TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred ----CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEE
Confidence 999999999643 22 3334 5789999999998877764
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.4e-18 Score=158.23 Aligned_cols=204 Identities=18% Similarity=0.309 Sum_probs=148.6
Q ss_pred CCceEEEEEcCCcCC-CCceeeeecccCccceEEeCCC-CCeeEEEEEecccCCCceeecceeEEEEEcCCCce-----e
Q 020756 3 SPASVQIYACGKDLQ-SQPLARRSFFRCSTVQLNWNRG-STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE-----G 75 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~-~~~i~~~~~f~~~~~~~~Wsp~-G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~-----~ 75 (321)
..+.|+||++..... .+.+.....+......+.|+|+ +++|+.. ..| | .+++++...... .
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~d---------g--~v~iwd~~~~~~~~~~~~ 154 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASG-GNN---------G--EIFIWDMNKCTESPSNYT 154 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEE-CSS---------S--CEEBCBTTTTSSCTTTCC
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEE-cCC---------C--eEEEEECCCCcccccccc
Confidence 468999999987221 2356666667788889999999 5555443 211 2 255555544320 1
Q ss_pred eee----cCCCCCeEEEEECcC-CCEEEEEEccCCCeEEEEeCCC-ceeEEe--C------CcCeeeEEEcCCC-CeEEE
Q 020756 76 LVP----LRKEGPVHDVQWSYS-GSEFAVVYGFMPASATIFNKKC-RPILEL--G------SGPYNTVRWNPKG-KFLCL 140 (321)
Q Consensus 76 ~v~----l~~~~~v~~~~wsP~-g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~------~~~~~~~~~sPdG-~~l~~ 140 (321)
.+. ..|.+.|.+++|+|+ +..|++ +..++.|.+||++. ..+..+ + ...+.++.|+|+| .+|++
T Consensus 155 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 155 PLTPGQSMSSVDEVISLAWNQSLAHVFAS--AGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CBCCCCSCCSSCCCCEEEECSSCTTEEEE--ESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred ccccccccCCCCCeeEEEeCCCCCcEEEE--EcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 111 247889999999999 566666 46789999999965 455555 3 6789999999998 57777
Q ss_pred EccCCCCC---cEEEEECCCC-eEEEeee-CC--CeeeEEEcc-CCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEe
Q 020756 141 AGFGNLPG---DMAFWDYVDG-KQLGTTR-AE--CSVTSEWSP-DGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKK 209 (321)
Q Consensus 141 ~g~~n~~g---~i~iwD~~~~-~~i~~~~-~~--~~~~~~wSp-dG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~ 209 (321)
++ .++ .|++||++++ ..+..+. .| .+..++|+| +|++|++++. |+.++|||+. ++.+ +..
T Consensus 233 ~~---~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 233 AT---GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR------DNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp EE---CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES------SSEEEEECSSSCCEEEEEEC
T ss_pred EE---CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC------CCCEEEeeCCCCccceeecC
Confidence 77 666 9999999986 5666665 44 789999999 9999999994 9999999984 5555 445
Q ss_pred ccCceEEEEEecCCC-CCCCC
Q 020756 210 MFDKLFQAEWKPVSP-DKFGD 229 (321)
Q Consensus 210 ~~~~~~~~~w~P~~~-~~~~~ 229 (321)
|...+..+.|+|+.+ .+++.
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEEC
T ss_pred CCCceEEEEECCCCCCEEEEE
Confidence 677899999999984 44443
No 79
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.3e-17 Score=159.14 Aligned_cols=179 Identities=9% Similarity=-0.055 Sum_probs=133.5
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEc-CCCceeeee-cCCCCCeEEEEECcCCCEEEEEEccCCCe
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTT-DGTHEGLVP-LRKEGPVHDVQWSYSGSEFAVVYGFMPAS 107 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~-~g~~~~~v~-l~~~~~v~~~~wsP~g~~l~~~~g~~~~~ 107 (321)
.+..+.|+|+|++|+++...| |...||.+.. .+.....+. ..+...|.+++|+|+|++|++. ..++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~--~~~g~ 172 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD---------KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIA--DKFGD 172 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG---------TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEE--ETTSE
T ss_pred ceEEEEEcCCCCEEEEEECCC---------CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEE--eCCCc
Confidence 467899999999986654221 4444555542 222222222 1467899999999999999885 56889
Q ss_pred EEEEeCCCce-------eEEeCCcCeeeEEEcCC---CCeEEEEccCCCCCcEEEEECCCCeEEEe-eeCC--CeeeEEE
Q 020756 108 ATIFNKKCRP-------ILELGSGPYNTVRWNPK---GKFLCLAGFGNLPGDMAFWDYVDGKQLGT-TRAE--CSVTSEW 174 (321)
Q Consensus 108 i~i~d~~~~~-------~~~~~~~~~~~~~~sPd---G~~l~~~g~~n~~g~i~iwD~~~~~~i~~-~~~~--~~~~~~w 174 (321)
+.+|++.... ...-|...+.++.|+|+ |++|++++ .|+.|++||+.+++++.. +..| .+.+++|
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~---~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~ 249 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD---RDEHIKISHYPQCFIVDKWLFGHKHFVSSICC 249 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE---TTSCEEEEEESCTTCEEEECCCCSSCEEEEEE
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc---CCCcEEEEECCCCceeeeeecCCCCceEEEEE
Confidence 9999985332 22237889999999999 99999999 899999999998877766 3344 7899999
Q ss_pred ccCCCEEEEEEcCCceeecCcEEEEeec-CceeEEec---------------------------cCceEEEEEecCCCCC
Q 020756 175 SPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFKKM---------------------------FDKLFQAEWKPVSPDK 226 (321)
Q Consensus 175 SpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~~~---------------------------~~~~~~~~w~P~~~~~ 226 (321)
+ ||++|++++. |+.|+|||+. |+++.... ...+..+.|.|+...+
T Consensus 250 s-d~~~l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 250 G-KDYLLLSAGG------DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp C-STTEEEEEES------SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred C-CCCEEEEEeC------CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 9 9999999994 9999999984 55543321 1357889999998877
Q ss_pred CCC
Q 020756 227 FGD 229 (321)
Q Consensus 227 ~~~ 229 (321)
+..
T Consensus 323 ~~~ 325 (450)
T 2vdu_B 323 AFF 325 (450)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 80
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.79 E-value=2.3e-17 Score=148.83 Aligned_cols=174 Identities=21% Similarity=0.336 Sum_probs=129.7
Q ss_pred ccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC--ceeeeecCCCCCeEEEEECcC--CCEEEEEEc
Q 020756 27 FRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT--HEGLVPLRKEGPVHDVQWSYS--GSEFAVVYG 102 (321)
Q Consensus 27 f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~--~~~~v~l~~~~~v~~~~wsP~--g~~l~~~~g 102 (321)
+...+..+.|+|+|++|+... . | +. +.+++..+. ........|.++|.+++|+|+ |+.|+++
T Consensus 8 h~~~V~~~~~s~~g~~las~s-~--D-------~~--v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~-- 73 (297)
T 2pm7_B 8 HNEMIHDAVMDYYGKRMATCS-S--D-------KT--IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC-- 73 (297)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-T--T-------SC--EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEE--
T ss_pred CcCceEEEEECCCCCEEEEEe-C--C-------CE--EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEE--
Confidence 455677899999999987652 1 1 33 444454432 112222358999999999864 8888884
Q ss_pred cCCCeEEEEeCCCc---eeEEe--CCcCeeeEEEcCC--CCeEEEEccCCCCCcEEEEECCCCe--EEEeeeCC--Ceee
Q 020756 103 FMPASATIFNKKCR---PILEL--GSGPYNTVRWNPK--GKFLCLAGFGNLPGDMAFWDYVDGK--QLGTTRAE--CSVT 171 (321)
Q Consensus 103 ~~~~~i~i~d~~~~---~~~~~--~~~~~~~~~~sPd--G~~l~~~g~~n~~g~i~iwD~~~~~--~i~~~~~~--~~~~ 171 (321)
..|++|+|||+... .+..+ |...++++.|+|+ |.+|++++ .|+.|++||+++.. ....+..| .+..
T Consensus 74 s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s---~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS---SDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (297)
T ss_dssp ETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEEBCSSSCBCCEEEECCSSCEEE
T ss_pred cCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEE---CCCcEEEEEecCCCceeeeeeecccCccce
Confidence 67899999999643 44444 7889999999998 89999999 89999999998652 12344444 6889
Q ss_pred EEEccC-------------CCEEEEEEcCCceeecCcEEEEeecC-c----ee--EEeccCceEEEEEecCC
Q 020756 172 SEWSPD-------------GRYFMTATTAPRLQIDNGIKIFHHNG-S----LF--FKKMFDKLFQAEWKPVS 223 (321)
Q Consensus 172 ~~wSpd-------------G~~l~t~~s~~rl~~d~~v~iw~~~g-~----~l--~~~~~~~~~~~~w~P~~ 223 (321)
++|+|+ +++|++++. |+.|+|||+.. . ++ +..|...|..++|+|+.
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~------D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGA------DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp EEECCCC------------CCEEEEEET------TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred EeecCCcccccccCCCCCCcceEEEEcC------CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence 999997 579999994 99999999953 3 22 44577899999999985
No 81
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.78 E-value=1.5e-18 Score=165.05 Aligned_cols=199 Identities=15% Similarity=0.148 Sum_probs=139.4
Q ss_pred CCceEEEEEcCCcCCCCceeeee--cccCccceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec
Q 020756 3 SPASVQIYACGKDLQSQPLARRS--FFRCSTVQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL 79 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~--~f~~~~~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l 79 (321)
..|.|+||++.. ++...... .+...+..+.|+| +|++|+.. +.| |. |.++++.+.....+..
T Consensus 140 ~dg~i~lWd~~~---~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~-s~D---------~~--v~iwd~~~~~~~~~~~ 204 (435)
T 4e54_B 140 KGGDIMLWNFGI---KDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS-SME---------GT--TRLQDFKGNILRVFAS 204 (435)
T ss_dssp TTSCEEEECSSC---CSCCEEECCCSSSCCCCEEEECSSCTTEEEEE-CSS---------SC--EEEEETTSCEEEEEEC
T ss_pred CCCEEEEEECCC---CCceeEEEccCCCCCEEEEEEeCCCCCEEEEE-eCC---------CE--EEEeeccCCceeEEec
Confidence 578999999987 44333333 3567788999998 46665543 211 22 4555665543333322
Q ss_pred C--CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCC-eEEEEccCCCCCcEEEEE
Q 020756 80 R--KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGK-FLCLAGFGNLPGDMAFWD 154 (321)
Q Consensus 80 ~--~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~-~l~~~g~~n~~g~i~iwD 154 (321)
. +...+.+++|+|+|+.|++ |..++.|.+||++++.+..+ |...++++.|+|++. +|++++ .|+.|+|||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~--g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s---~d~~v~iwd 279 (435)
T 4e54_B 205 SDTINIWFCSLDVSASSRMVVT--GDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATAS---VDQTVKIWD 279 (435)
T ss_dssp CSSCSCCCCCEEEETTTTEEEE--ECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEE---TTSBCCEEE
T ss_pred cCCCCccEEEEEECCCCCEEEE--EeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEec---CcceeeEEe
Confidence 2 2346789999999999888 57889999999988877666 788999999999997 556677 889999999
Q ss_pred CCCCeEEEee---eCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEE--ecc------CceEEEEEe
Q 020756 155 YVDGKQLGTT---RAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFK--KMF------DKLFQAEWK 220 (321)
Q Consensus 155 ~~~~~~i~~~---~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~--~~~------~~~~~~~w~ 220 (321)
+++.+....+ ..| .++.++|||||++|++++. |+.|+|||+. +..... .+. .......|+
T Consensus 280 ~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~------D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (435)
T 4e54_B 280 LRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ------KSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWH 353 (435)
T ss_dssp TTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES------SSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEEC
T ss_pred cccccccceEEEeeeccccccceeECCCCCeeEEEcC------CCEEEEEECCCCccceEEecccccccccceeEEEEEc
Confidence 9876543322 223 7889999999999999994 9999999984 443321 111 123345677
Q ss_pred cCCCCCC
Q 020756 221 PVSPDKF 227 (321)
Q Consensus 221 P~~~~~~ 227 (321)
|....++
T Consensus 354 ~~~~~~~ 360 (435)
T 4e54_B 354 PRYNLIV 360 (435)
T ss_dssp SSSSCEE
T ss_pred CCCCEEE
Confidence 7655443
No 82
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.78 E-value=1.5e-17 Score=154.17 Aligned_cols=169 Identities=15% Similarity=0.169 Sum_probs=127.9
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+ ++++.... +......+.|++++ +++.. ...+++++..........+..
T Consensus 79 ~d~~v~iWd~~~---~~~~~~~~-~~~~v~~v~~~~~~--~~~~~-------------~~~i~i~d~~~~~~~~~~~~~- 138 (355)
T 3vu4_A 79 VKEVVHIWDDVK---KQDVSRIK-VDAPVKDLFLSREF--IVVSY-------------GDVISVFKFGNPWKRITDDIR- 138 (355)
T ss_dssp STTEEEEEETTT---TEEEEEEE-CSSCEEEEEECSSE--EEEEE-------------TTEEEEEESSTTCCBSSCCEE-
T ss_pred CccEEEEEECCC---CcEEEEEE-CCCceEEEEEcCCE--EEEEE-------------cCEEEEEECCCCceeeEEecc-
Confidence 457999999998 77787776 45678889999864 33321 112555555443111111112
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCce-----------------eEEe--CCcCeeeEEEcCCCCeEEEEcc
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRP-----------------ILEL--GSGPYNTVRWNPKGKFLCLAGF 143 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~-----------------~~~~--~~~~~~~~~~sPdG~~l~~~g~ 143 (321)
+...+++++ ..+++..|..++.|.+||+.... +..+ |...+.+++|+|+|++|++++
T Consensus 139 -~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s- 214 (355)
T 3vu4_A 139 -FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS- 214 (355)
T ss_dssp -EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE-
T ss_pred -CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe-
Confidence 455667777 67777667889999999997532 4555 788999999999999999999
Q ss_pred CCCCCc-EEEEECCCCeEEEeee-C-C--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 144 GNLPGD-MAFWDYVDGKQLGTTR-A-E--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 144 ~n~~g~-i~iwD~~~~~~i~~~~-~-~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
.|++ |+|||+.+++++..+. + | .+..++|||||++|++++. |+.++|||+..
T Consensus 215 --~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~------d~~v~iw~~~~ 271 (355)
T 3vu4_A 215 --QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD------KWTLHVFEIFN 271 (355)
T ss_dssp --TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET------TCEEEEEESSC
T ss_pred --CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC------CCEEEEEEccC
Confidence 9998 9999999999999887 3 4 7899999999999999994 99999999853
No 83
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=8.8e-17 Score=149.28 Aligned_cols=203 Identities=12% Similarity=0.101 Sum_probs=150.8
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+ ++.+....... ....+.|+|+|++|++... ....|+.++..... ....+.+.
T Consensus 52 ~d~~i~v~d~~~---~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~-----------~~~~v~v~d~~~~~-~~~~~~~~ 115 (391)
T 1l0q_A 52 HSNDVSIIDTAT---NNVIATVPAGS-SPQGVAVSPDGKQVYVTNM-----------ASSTLSVIDTTSNT-VAGTVKTG 115 (391)
T ss_dssp GGTEEEEEETTT---TEEEEEEECSS-SEEEEEECTTSSEEEEEET-----------TTTEEEEEETTTTE-EEEEEECS
T ss_pred CCCeEEEEECCC---CeEEEEEECCC-CccceEECCCCCEEEEEEC-----------CCCEEEEEECCCCe-EEEEEeCC
Confidence 457899999988 66666655443 7778999999999887531 11247777876653 33333455
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeE
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQ 160 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~ 160 (321)
..+.+++|+|+|+.|+++ +..++.|.+||+... .+..+ ....+..+.|+|+|++|++++. .++.|++||+.+++.
T Consensus 116 ~~~~~~~~s~dg~~l~~~-~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVT-NNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANF--DSMSISVIDTVTNSV 192 (391)
T ss_dssp SSEEEEEECTTSSEEEEE-ETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEET--TTTEEEEEETTTTEE
T ss_pred CCcceEEECCCCCEEEEE-eCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeC--CCCEEEEEECCCCeE
Confidence 678999999999988665 456789999998654 44444 4556789999999999865541 568999999999988
Q ss_pred EEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEEe-ccCceEEEEEecCCCCCC
Q 020756 161 LGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFKK-MFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 161 i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~~-~~~~~~~~~w~P~~~~~~ 227 (321)
+..+..+ .+..++|+|||++|+++.... .++.+++||+. ++.+... ....+..+.|+|++..++
T Consensus 193 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~---~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 193 IDTVKVEAAPSGIAVNPEGTKAYVTNVDK---YFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVY 259 (391)
T ss_dssp EEEEECSSEEEEEEECTTSSEEEEEEECS---SCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEE
T ss_pred EEEEecCCCccceEECCCCCEEEEEecCc---CCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEE
Confidence 8877765 677899999999999887310 27899999985 4444322 234678899999998775
No 84
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.78 E-value=3.4e-18 Score=159.57 Aligned_cols=179 Identities=19% Similarity=0.306 Sum_probs=130.4
Q ss_pred CCCceEEEEEcCCcCCC----Cc--eeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee
Q 020756 2 GSPASVQIYACGKDLQS----QP--LARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG 75 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~----~~--i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~ 75 (321)
+..+.|+||++...... .. +............+.|+|+|..+++....+ | .+.+++......
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------g--~v~iwd~~~~~~- 200 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS---------N--FASIWDLKAKKE- 200 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS---------S--CEEEEETTTTEE-
T ss_pred cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC---------C--CEEEEECCCCCc-
Confidence 45789999999883100 11 111233456788999999965555543211 2 255666655422
Q ss_pred eeecC-C------CCCeEEEEECcCCC-EEEEEEccCCC---eEEEEeCCC--ceeEEe---CCcCeeeEEEcC-CCCeE
Q 020756 76 LVPLR-K------EGPVHDVQWSYSGS-EFAVVYGFMPA---SATIFNKKC--RPILEL---GSGPYNTVRWNP-KGKFL 138 (321)
Q Consensus 76 ~v~l~-~------~~~v~~~~wsP~g~-~l~~~~g~~~~---~i~i~d~~~--~~~~~~---~~~~~~~~~~sP-dG~~l 138 (321)
...+. + ...|.+++|+|++. .|++. ..++ .|.+||++. ..+..+ |...+.++.|+| ++++|
T Consensus 201 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~--~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 278 (416)
T 2pm9_A 201 VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA--TGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLL 278 (416)
T ss_dssp EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE--ECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCE
T ss_pred ceEEeccccccccCCceEEEEECCCCCCEEEEE--ECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeE
Confidence 22222 2 78999999999985 56654 4566 999999964 333333 577899999999 99999
Q ss_pred EEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCC-CEEEEEEcCCceeecCcEEEEeecC
Q 020756 139 CLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDG-RYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG-~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
++++ .++.|++||+.+++++..+..| .+..++|+||| ++|++++. |+.|+||++..
T Consensus 279 ~s~~---~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~------d~~i~iw~~~~ 337 (416)
T 2pm9_A 279 LSSG---RDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF------DNKIEVQTLQN 337 (416)
T ss_dssp EEEE---SSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS------SSEEEEEESCC
T ss_pred EEEe---CCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec------CCcEEEEEccC
Confidence 9999 8999999999999999888776 68899999999 88888884 99999999854
No 85
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.78 E-value=3.4e-17 Score=147.55 Aligned_cols=183 Identities=14% Similarity=0.214 Sum_probs=134.9
Q ss_pred cccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eee-eecCCCCCeEEEEECc--CCCEEEEEE
Q 020756 26 FFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGL-VPLRKEGPVHDVQWSY--SGSEFAVVY 101 (321)
Q Consensus 26 ~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~-v~l~~~~~v~~~~wsP--~g~~l~~~~ 101 (321)
.++..+..+.|+|+|++|+... . .|...+|.+...... ... ....|.++|.+++|+| +++.|++.
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~-~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~- 77 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCS-S---------DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASA- 77 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEE-T---------TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEE-
T ss_pred ccccceeEEEEcCCCCEEEEee-C---------CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEE-
Confidence 3467788999999999887652 1 133334444322211 111 1125889999999999 68888884
Q ss_pred ccCCCeEEEEeCCC----------ceeEEe--CCcCeeeEEEcCC--CCeEEEEccCCCCCcEEEEECCCCeE-------
Q 020756 102 GFMPASATIFNKKC----------RPILEL--GSGPYNTVRWNPK--GKFLCLAGFGNLPGDMAFWDYVDGKQ------- 160 (321)
Q Consensus 102 g~~~~~i~i~d~~~----------~~~~~~--~~~~~~~~~~sPd--G~~l~~~g~~n~~g~i~iwD~~~~~~------- 160 (321)
..|+.|.+||+.. ..+..+ |...+.++.|+|+ +++|++++ .++.|++||+++++.
T Consensus 78 -~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 78 -SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG---NDGILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp -ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE---TTCEEEEEECSSTTCTTCCEEE
T ss_pred -cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec---CCCcEEEecCCChHHhcccccc
Confidence 6689999999864 335555 6889999999999 99999999 899999999865431
Q ss_pred -----------------------------------------------------EEeeeCC--CeeeEEEccCC----CEE
Q 020756 161 -----------------------------------------------------LGTTRAE--CSVTSEWSPDG----RYF 181 (321)
Q Consensus 161 -----------------------------------------------------i~~~~~~--~~~~~~wSpdG----~~l 181 (321)
+..+..| .++.++|+|+| ++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 154 SEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp EEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred ccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE
Confidence 3333344 68889999998 889
Q ss_pred EEEEcCCceeecCcEEEEeecC-----------------------------------------------cee--EEeccC
Q 020756 182 MTATTAPRLQIDNGIKIFHHNG-----------------------------------------------SLF--FKKMFD 212 (321)
Q Consensus 182 ~t~~s~~rl~~d~~v~iw~~~g-----------------------------------------------~~l--~~~~~~ 212 (321)
++++. |+.|+|||+.. +.+ +..|..
T Consensus 234 ~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 307 (351)
T 3f3f_A 234 ATGCK------DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNG 307 (351)
T ss_dssp EEEET------TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSS
T ss_pred EEEcC------CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccc
Confidence 99984 99999999954 223 334667
Q ss_pred ceEEEEEecCCCCCCCC
Q 020756 213 KLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 213 ~~~~~~w~P~~~~~~~~ 229 (321)
.+..+.|+|+...+++.
T Consensus 308 ~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 308 EVWSVSWNLTGTILSSA 324 (351)
T ss_dssp CEEEEEECSSSCCEEEE
T ss_pred cEEEEEEcCCCCEEEEe
Confidence 89999999998877765
No 86
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.5e-17 Score=151.18 Aligned_cols=189 Identities=19% Similarity=0.251 Sum_probs=138.8
Q ss_pred ceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcC--CCEE
Q 020756 20 PLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYS--GSEF 97 (321)
Q Consensus 20 ~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~--g~~l 97 (321)
.+.....++..+..+.|+|+|++|++... .|...+|.+.............|.++|.+++|+|+ +++|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 72 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSS----------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTIL 72 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEET----------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEEC----------CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEE
Confidence 44555667788999999999998876521 13333444432222122223358899999999987 8888
Q ss_pred EEEEccCCCeEEEEeCCCc---eeEEe--CCcCeeeEEEcCC--CCeEEEEccCCCCCcEEEEECCCCe--EEEeeeCC-
Q 020756 98 AVVYGFMPASATIFNKKCR---PILEL--GSGPYNTVRWNPK--GKFLCLAGFGNLPGDMAFWDYVDGK--QLGTTRAE- 167 (321)
Q Consensus 98 ~~~~g~~~~~i~i~d~~~~---~~~~~--~~~~~~~~~~sPd--G~~l~~~g~~n~~g~i~iwD~~~~~--~i~~~~~~- 167 (321)
+++ ..++.|.+||+... .+..+ |...+.++.|+|+ |++|++++ .++.|.+||+.+.. ....+..+
T Consensus 73 ~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 73 ASC--SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp EEE--ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEECCTTSCCCEEEEECCT
T ss_pred EEe--ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec---CCCcEEEEecCCCCceeeEEecCCC
Confidence 885 66899999999654 44444 6789999999999 99999999 89999999998772 22333343
Q ss_pred -CeeeEEEcc-------------CCCEEEEEEcCCceeecCcEEEEeecC-c----ee--EEeccCceEEEEEecC---C
Q 020756 168 -CSVTSEWSP-------------DGRYFMTATTAPRLQIDNGIKIFHHNG-S----LF--FKKMFDKLFQAEWKPV---S 223 (321)
Q Consensus 168 -~~~~~~wSp-------------dG~~l~t~~s~~rl~~d~~v~iw~~~g-~----~l--~~~~~~~~~~~~w~P~---~ 223 (321)
.+..++|+| |+.+|++++. |+.|+|||+.. . .+ ...|...+..+.|+|+ .
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~ 221 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGA------DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR 221 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEET------TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeC------CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCC
Confidence 789999999 7999999995 99999999953 2 11 3346778999999999 5
Q ss_pred CCCCCC
Q 020756 224 PDKFGD 229 (321)
Q Consensus 224 ~~~~~~ 229 (321)
..+++.
T Consensus 222 ~~l~s~ 227 (379)
T 3jrp_A 222 SYLASV 227 (379)
T ss_dssp EEEEEE
T ss_pred CeEEEE
Confidence 656544
No 87
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.78 E-value=4.4e-18 Score=161.75 Aligned_cols=183 Identities=12% Similarity=0.166 Sum_probs=134.3
Q ss_pred eecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eeeee-cCCCCCeEEEEECc-CCCEEEEE
Q 020756 24 RSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGLVP-LRKEGPVHDVQWSY-SGSEFAVV 100 (321)
Q Consensus 24 ~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~v~-l~~~~~v~~~~wsP-~g~~l~~~ 100 (321)
..-|...+..+.|+|.+..+++..+.| |. |.+++..... ...+. ..|.++|.+++|+| +++.|+++
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~d---------g~--i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~ 183 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKG---------GD--IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYAS 183 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETT---------SC--EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCC---------CE--EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEE
Confidence 334556688999999766555543221 33 4555554332 22333 35899999999999 67888874
Q ss_pred EccCCCeEEEEeCCCceeEEe-----CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEE
Q 020756 101 YGFMPASATIFNKKCRPILEL-----GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSE 173 (321)
Q Consensus 101 ~g~~~~~i~i~d~~~~~~~~~-----~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~ 173 (321)
..|++|+|||+++.....+ +...+.++.|+|+|++|++++ .+|.|++||++. +.+..+..| .+++++
T Consensus 184 --s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~---~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 184 --SMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD---NVGNVILLNMDG-KELWNLRMHKKKVTHVA 257 (435)
T ss_dssp --CSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC---SSSBEEEEESSS-CBCCCSBCCSSCEEEEE
T ss_pred --eCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe---CCCcEeeeccCc-ceeEEEecccceEEeee
Confidence 7789999999987766554 233567899999999999998 899999999964 455666665 789999
Q ss_pred EccCCC-EEEEEEcCCceeecCcEEEEeecC-ce----e-EEeccCceEEEEEecCCCCCCCC
Q 020756 174 WSPDGR-YFMTATTAPRLQIDNGIKIFHHNG-SL----F-FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 174 wSpdG~-~l~t~~s~~rl~~d~~v~iw~~~g-~~----l-~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
|+|++. +|++++ .|+.|+|||+.. +. + ...|...|..++|+|++..+++.
T Consensus 258 ~~p~~~~~~~s~s------~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 258 LNPCCDWFLATAS------VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp ECTTCSSEEEEEE------TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE
T ss_pred ecCCCceEEEEec------CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE
Confidence 999987 455666 499999999843 21 1 34577789999999999888765
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.77 E-value=3.1e-16 Score=142.05 Aligned_cols=203 Identities=12% Similarity=0.071 Sum_probs=153.2
Q ss_pred CCCceEEEEEcCCcCCC--CceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec
Q 020756 2 GSPASVQIYACGKDLQS--QPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL 79 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~--~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l 79 (321)
|.++.|+||++...... .++.....+...+..+.|+|+|++|+... . ...+..++...........
T Consensus 58 s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~-~-----------d~~i~~~~~~~~~~~~~~~ 125 (340)
T 4aow_A 58 SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS-W-----------DGTLRLWDLTTGTTTRRFV 125 (340)
T ss_dssp ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE-T-----------TSEEEEEETTTTEEEEEEE
T ss_pred cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc-c-----------cccceEEeecccceeeeec
Confidence 46789999999873211 12333344567888999999999987652 1 1125566666655555555
Q ss_pred CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe----CCcCeeeEEEcCCCC--eEEEEccCCCCCcEEEE
Q 020756 80 RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL----GSGPYNTVRWNPKGK--FLCLAGFGNLPGDMAFW 153 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~----~~~~~~~~~~sPdG~--~l~~~g~~n~~g~i~iw 153 (321)
.+...+..+.+++++..|++. ..++.+.+||......... +...+..+.|++++. ++++++ .++.|++|
T Consensus 126 ~~~~~~~~~~~~~~~~~l~s~--s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~---~d~~i~i~ 200 (340)
T 4aow_A 126 GHTKDVLSVAFSSDNRQIVSG--SRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG---WDKLVKVW 200 (340)
T ss_dssp CCSSCEEEEEECTTSSCEEEE--ETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE---TTSCEEEE
T ss_pred CCCCceeEEEEeecCccceee--cCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc---CCCEEEEE
Confidence 677889999999999998884 6688999999976544333 577889999998764 566777 78999999
Q ss_pred ECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-eeEE-eccCceEEEEEecCCCCCC
Q 020756 154 DYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LFFK-KMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 154 D~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l~~-~~~~~~~~~~w~P~~~~~~ 227 (321)
|+.+++.+..+..| .+++++|+|||++|++++. |+.++|||+... .+.. .....+..+.|+|+...+.
T Consensus 201 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~------Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 272 (340)
T 4aow_A 201 NLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK------DGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC 272 (340)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET------TCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEE
T ss_pred ECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeC------CCeEEEEEeccCceeeeecCCceEEeeecCCCCceee
Confidence 99999999888876 7889999999999999994 999999999644 4433 3456789999999764433
No 89
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.77 E-value=9e-17 Score=151.85 Aligned_cols=179 Identities=16% Similarity=0.219 Sum_probs=135.6
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce----eeee
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE----GLVP 78 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~----~~v~ 78 (321)
..+.+++|++... ...+..........+.+.|+++|++++.... | | .+.+++...... ....
T Consensus 207 ~d~~i~~~d~~~~--~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~---D-------~--~v~i~~~~~~~~~~~~~~~~ 272 (420)
T 4gga_A 207 RSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRHLASGGN---D-------N--LVNVWPSAPGEGGWVPLQTF 272 (420)
T ss_dssp TTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSEEEEEET---T-------S--CEEEEESSCCSSCSCCSEEE
T ss_pred CCCceeEeeeccc--ceeeEEecccccceeeeeecCCCCeeeeeec---c-------c--cceEEeeccccccceeeeee
Confidence 3567777777762 3455666667788889999999998877521 1 2 234444432211 1233
Q ss_pred cCCCCCeEEEEECcCCCE-EEEEEccCCCeEEEEeCCCc-eeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEEC
Q 020756 79 LRKEGPVHDVQWSYSGSE-FAVVYGFMPASATIFNKKCR-PILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDY 155 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~-l~~~~g~~~~~i~i~d~~~~-~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~ 155 (321)
..+.+.|.+++|+|++.. +++..|..|+.|+|||+... .+..+ ....+.++.|+|+++.|++++ +..++.|+|||+
T Consensus 273 ~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~s-g~~d~~I~iwd~ 351 (420)
T 4gga_A 273 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH-GFAQNQLVIWKY 351 (420)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEE-CTTTCCEEEEET
T ss_pred cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEE-ecCCCEEEEEEC
Confidence 457899999999997764 45556778999999999654 45555 667889999999999998864 235799999999
Q ss_pred CCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 156 VDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 156 ~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
.+++++..+.+| .|++++|||||++|++++. |+.|+|||+.
T Consensus 352 ~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~------D~tvriWdv~ 394 (420)
T 4gga_A 352 PTMAKVAELKGHTSRVLSLTMSPDGATVASAAA------DETLRLWRCF 394 (420)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSCEEEEET------TTEEEEECCS
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEec------CCeEEEEECC
Confidence 999999999887 7899999999999999994 9999999985
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.77 E-value=4.2e-17 Score=173.40 Aligned_cols=204 Identities=8% Similarity=0.152 Sum_probs=157.7
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
|..+.|+||++.+ ++.+.....+...+..+.|+|+|++|++.. ....+.+++............|
T Consensus 634 ~~d~~i~vw~~~~---~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------------~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 634 GADKTLQVFKAET---GEKLLDIKAHEDEVLCCAFSSDDSYIATCS------------ADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp ETTSCEEEEETTT---CCEEEEECCCSSCEEEEEECTTSSEEEEEE------------TTSEEEEEETTTCCEEEEEECC
T ss_pred eCCCeEEEEECCC---CCEEEEeccCCCCEEEEEEecCCCEEEEEe------------CCCeEEEEECCCCceEEEEcCC
Confidence 4568999999999 788888887888899999999999887752 1123666676554333333368
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
.+.|.+++|+|+++..+++.+..++.+.+||+.. ..+..+ |...+.++.|+|+|++|++++ .+|.|.+||+.++
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s---~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS---ADGTLRLWDVRSA 775 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE---SSSEEEEEEGGGT
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE---CCCeEEEEeCCCC
Confidence 8999999999976655555578899999999954 455555 788999999999999999999 8999999999877
Q ss_pred eEEEeee-------------------------------------------------------CC--CeeeEEEccCCCEE
Q 020756 159 KQLGTTR-------------------------------------------------------AE--CSVTSEWSPDGRYF 181 (321)
Q Consensus 159 ~~i~~~~-------------------------------------------------------~~--~~~~~~wSpdG~~l 181 (321)
+....+. .+ .+..++|+|+|+++
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 855 (1249)
T 3sfz_A 776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLA 855 (1249)
T ss_dssp EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEE
T ss_pred cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEE
Confidence 5443321 11 56678888999988
Q ss_pred EEEEcCCceeecCcEEEEeecCc-ee--EEeccCceEEEEEecCCCCCCCC
Q 020756 182 MTATTAPRLQIDNGIKIFHHNGS-LF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 182 ~t~~s~~rl~~d~~v~iw~~~g~-~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
++++. |+.+++|++... .+ ...|...+..+.|+|++..+++.
T Consensus 856 ~~~~~------dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~ 900 (1249)
T 3sfz_A 856 VIALS------QYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTA 900 (1249)
T ss_dssp EEECS------SSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEeC------CCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEE
Confidence 88884 889999999644 33 44677889999999998877765
No 91
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.77 E-value=8.4e-18 Score=164.06 Aligned_cols=171 Identities=9% Similarity=0.034 Sum_probs=127.7
Q ss_pred cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCC-----CeEEEEECcCCCEEEEEEc
Q 020756 28 RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEG-----PVHDVQWSYSGSEFAVVYG 102 (321)
Q Consensus 28 ~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~-----~v~~~~wsP~g~~l~~~~g 102 (321)
...+..+.|||+|+.|++... .|+ +.+++..+ ....+.|.. .|++++|||||+.|+++
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~----------dg~--V~iwd~~~---~l~~l~~~~~~~~~sv~svafSPDG~~LAsg-- 147 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSN----------NGN--VSVFKDNK---MLTNLDSKGNLSSRTYHCFEWNPIESSIVVG-- 147 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEET----------TSC--EEEEETTE---EEEECCCSSCSTTTCEEEEEECSSSSCEEEE--
T ss_pred CCcEEEEEECCCCCEEEEEeC----------CCc--EEEEeCCc---eeeeccCCCccccccEEEEEEcCCCCEEEEE--
Confidence 466889999999999998641 133 44444333 222223333 59999999999999995
Q ss_pred cCCCeEEEEeCCCce--------eEEe------CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeE---EEeee
Q 020756 103 FMPASATIFNKKCRP--------ILEL------GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQ---LGTTR 165 (321)
Q Consensus 103 ~~~~~i~i~d~~~~~--------~~~~------~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~---i~~~~ 165 (321)
..|++|.|||+..+. +.++ |...|.+++||||| |++++ .|+.|++||+.+++. ..++.
T Consensus 148 s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass---~D~tVrlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 148 NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAAL---SNNSVFSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEE---TTCCEEEECCCSSSSCCCEEEEE
T ss_pred cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEe---CCCeEEEEECCCCccccceeeec
Confidence 779999999997653 3454 34589999999999 77777 789999999987763 23442
Q ss_pred -CC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee--EE-eccCceEEEEE--ecCCCCCCCC
Q 020756 166 -AE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF--FK-KMFDKLFQAEW--KPVSPDKFGD 229 (321)
Q Consensus 166 -~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l--~~-~~~~~~~~~~w--~P~~~~~~~~ 229 (321)
+| .+..++|+ |++||+++ ++.|+|||+.+..+ +. +|...++++.| +|+...+..+
T Consensus 223 ~~h~~~V~svaFs--g~~LASa~-------~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a 285 (588)
T 2j04_A 223 NASRRKITDLKIV--DYKVVLTC-------PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMS 285 (588)
T ss_dssp CCCSSCCCCEEEE--TTEEEEEC-------SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEEC
T ss_pred ccccCcEEEEEEE--CCEEEEEe-------CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEE
Confidence 34 68999999 78899887 78999999976554 33 67889999999 8887555544
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.5e-17 Score=167.68 Aligned_cols=204 Identities=16% Similarity=0.272 Sum_probs=153.9
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCC--CCeeEEEEEecccCCCceeecceeEEEEEcCCCc--eeee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRG--STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH--EGLV 77 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~--G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~--~~~v 77 (321)
|..+.|+||++.... .+.+.....+...+..+.|+++ |++|+... .| |. +++++..+.. ....
T Consensus 28 ~~dg~I~vwd~~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s-~D---------g~--I~vwd~~~~~~~~~~~ 94 (753)
T 3jro_A 28 SSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-YD---------GK--VLIWKEENGRWSQIAV 94 (753)
T ss_dssp ETTTEEEEEEEETTE-EEEEEEECCCSSCEEEEEECCTTSCSEEEEEE-TT---------SC--EEEEEEETTEEEEEEE
T ss_pred ECCCcEEEEecCCCC-CccceeccCCcCceEEEEecCCCCCCEEEEEe-CC---------Ce--EEEEECCCCccccccc
Confidence 357899999998521 4555566666778889999988 88776642 11 33 3444444432 2233
Q ss_pred ecCCCCCeEEEEECcC--CCEEEEEEccCCCeEEEEeCCCc---eeEEe--CCcCeeeEEEcC-------------CCCe
Q 020756 78 PLRKEGPVHDVQWSYS--GSEFAVVYGFMPASATIFNKKCR---PILEL--GSGPYNTVRWNP-------------KGKF 137 (321)
Q Consensus 78 ~l~~~~~v~~~~wsP~--g~~l~~~~g~~~~~i~i~d~~~~---~~~~~--~~~~~~~~~~sP-------------dG~~ 137 (321)
...|.++|.+++|+|+ |+.|++. ..++.|.+||++.. ....+ |...+.++.|+| +|++
T Consensus 95 ~~~h~~~V~~v~~sp~~~~~~l~sg--s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 95 HAVHSASVNSVQWAPHEYGPLLLVA--SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEE--ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC
T ss_pred ccCCCCCeEEEEECCCCCCCEEEEE--eCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE
Confidence 3458899999999999 8888884 67899999999644 23333 788999999999 5999
Q ss_pred EEEEccCCCCCcEEEEECCCC----eEEEeeeCC--CeeeEEEccC---CCEEEEEEcCCceeecCcEEEEeecCc----
Q 020756 138 LCLAGFGNLPGDMAFWDYVDG----KQLGTTRAE--CSVTSEWSPD---GRYFMTATTAPRLQIDNGIKIFHHNGS---- 204 (321)
Q Consensus 138 l~~~g~~n~~g~i~iwD~~~~----~~i~~~~~~--~~~~~~wSpd---G~~l~t~~s~~rl~~d~~v~iw~~~g~---- 204 (321)
|++++ .+|.|++||++++ ..+..+..| .+++++|+|+ |++|++++. |+.++|||+...
T Consensus 173 l~sgs---~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~------Dg~I~iwd~~~~~~~~ 243 (753)
T 3jro_A 173 FVTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ------DRTCIIWTQDNEQGPW 243 (753)
T ss_dssp EEEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES------SSCEEEEEESSSSSCC
T ss_pred EEEEE---CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec------CCEEEEecCCCCCCcc
Confidence 99999 8999999999876 556666665 7899999999 999999994 999999999653
Q ss_pred --ee--EEeccCceEEEEEecCCCCCCCC
Q 020756 205 --LF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 205 --~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.+ ...+...++.+.|+|++..+++.
T Consensus 244 ~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 244 KKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp BCCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred eeEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 22 22356689999999999887764
No 93
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=1.1e-16 Score=141.17 Aligned_cols=204 Identities=16% Similarity=0.123 Sum_probs=142.1
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCC-CceeeeecC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDG-THEGLVPLR 80 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g-~~~~~v~l~ 80 (321)
+..+.|.+|++.+ ++.. ...........+.|+|+|++|++.. ...|++++..+ .....+...
T Consensus 19 ~~~~~i~~~d~~~---~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-------------~~~i~~~d~~~~~~~~~~~~~ 81 (297)
T 2ojh_A 19 SMRSSIEIFNIRT---RKMR-VVWQTPELFEAPNWSPDGKYLLLNS-------------EGLLYRLSLAGDPSPEKVDTG 81 (297)
T ss_dssp CCCEEEEEEETTT---TEEE-EEEEESSCCEEEEECTTSSEEEEEE-------------TTEEEEEESSSCCSCEECCCT
T ss_pred CcceeEEEEeCCC---Ccee-eeccCCcceEeeEECCCCCEEEEEc-------------CCeEEEEeCCCCCCceEeccc
Confidence 4568899999987 4443 3333466788999999999988741 22478888776 533333323
Q ss_pred C-CCCeEEEEECcCCCEEEEEEccC--CCeEEEEeCCCceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEEC-
Q 020756 81 K-EGPVHDVQWSYSGSEFAVVYGFM--PASATIFNKKCRPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDY- 155 (321)
Q Consensus 81 ~-~~~v~~~~wsP~g~~l~~~~g~~--~~~i~i~d~~~~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~- 155 (321)
+ ...+.+++|+|+|+.|+++.... ...|.+++..+.....+ ....+..+.|+|+|++|++++. .++.+.||++
T Consensus 82 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~--~~~~~~l~~~~ 159 (297)
T 2ojh_A 82 FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGI--RDQVFDIYSMD 159 (297)
T ss_dssp TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEE--ETTEEEEEEEE
T ss_pred cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEEC--CCCceEEEEEE
Confidence 3 46789999999999999975333 34666667666555555 4456888999999999885441 5677888874
Q ss_pred -CCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec--CceeE--EeccCceEEEEEecCCCCCCCC
Q 020756 156 -VDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN--GSLFF--KKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 156 -~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~--g~~l~--~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.+++........ .+..+.|+|||++|++++. .++.++||+++ +..+. ..+...+..+.|+|++..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSS-----RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp TTTCCEEECCCSSSCEEEEEECTTSSEEEEEEC-----TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEE
T ss_pred CCCCcceEcccCCCccccceECCCCCEEEEEec-----CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEE
Confidence 445443333332 6888999999999998874 27788999874 44442 2334567889999998877644
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.76 E-value=1.8e-16 Score=144.41 Aligned_cols=200 Identities=11% Similarity=0.117 Sum_probs=147.1
Q ss_pred CceEEEEEcCCcCCCCceeeee-cccCccceEEeCCC---CCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eeeee
Q 020756 4 PASVQIYACGKDLQSQPLARRS-FFRCSTVQLNWNRG---STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGLVP 78 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~-~f~~~~~~~~Wsp~---G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~v~ 78 (321)
.+.|+||++.. ++...... -+......+.|+|+ |++|++.. .+ | .+.+++..... .....
T Consensus 43 d~~v~iw~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d---------g--~i~iwd~~~~~~~~~~~ 107 (357)
T 3i2n_A 43 TGVIQLYEIQH---GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD-FG---------G--NLHIWNLEAPEMPVYSV 107 (357)
T ss_dssp CEEEEEEEECS---SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE-TT---------S--CEEEECTTSCSSCSEEE
T ss_pred CcEEEEEeCCC---CcccceeeecccCcEEEEEEcCCCCCCceEEEec-CC---------C--eEEEEeCCCCCccEEEE
Confidence 78999999998 55543333 34667889999999 57776642 11 2 25566665443 22233
Q ss_pred cCCCCCeEEEE------ECcCCCEEEEEEccCCCeEEEEeCCCc--eeEEe--CC----cCeeeEE----EcCCCCeEEE
Q 020756 79 LRKEGPVHDVQ------WSYSGSEFAVVYGFMPASATIFNKKCR--PILEL--GS----GPYNTVR----WNPKGKFLCL 140 (321)
Q Consensus 79 l~~~~~v~~~~------wsP~g~~l~~~~g~~~~~i~i~d~~~~--~~~~~--~~----~~~~~~~----~sPdG~~l~~ 140 (321)
..|.+.|.++. |+|+++.|++. ..++.+.+||+... .+..+ +. ..+.++. |+|++++|++
T Consensus 108 ~~~~~~v~~~~~~~~~~~s~~~~~l~~~--~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 185 (357)
T 3i2n_A 108 KGHKEIINAIDGIGGLGIGEGAPEIVTG--SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCA 185 (357)
T ss_dssp CCCSSCEEEEEEESGGGCC-CCCEEEEE--ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred EecccceEEEeeccccccCCCccEEEEE--eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEE
Confidence 35889999995 57899998884 66889999999643 45555 22 3677887 7899999999
Q ss_pred EccCCCCCcEEEEECCCCeEEEeeeCC-CeeeEEEcc---CCCEEEEEEcCCceeecCcEEEEeecCce-e--E-----E
Q 020756 141 AGFGNLPGDMAFWDYVDGKQLGTTRAE-CSVTSEWSP---DGRYFMTATTAPRLQIDNGIKIFHHNGSL-F--F-----K 208 (321)
Q Consensus 141 ~g~~n~~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSp---dG~~l~t~~s~~rl~~d~~v~iw~~~g~~-l--~-----~ 208 (321)
++ .++.|++||+++++.+...... .+..++|+| ++.+|++++. |+.++|||+.... + . .
T Consensus 186 ~~---~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 186 GY---DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSL------EGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp EE---TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEES------TTEEEEEEEEEEETTTEEEEEEEE
T ss_pred Ec---cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECC------CCeEEEEeCcCCCcccceeeeccC
Confidence 98 8899999999999876665543 889999999 9999999984 9999999985332 1 2 2
Q ss_pred eccCceEEEEEecCCC-CCCCC
Q 020756 209 KMFDKLFQAEWKPVSP-DKFGD 229 (321)
Q Consensus 209 ~~~~~~~~~~w~P~~~-~~~~~ 229 (321)
.+...+..+.|+|+.. .+++.
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEE
T ss_pred CCcCCEEEEEECCCCCcEEEEE
Confidence 6778999999999987 45543
No 95
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.6e-16 Score=140.68 Aligned_cols=194 Identities=13% Similarity=0.121 Sum_probs=144.9
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|++|++......+++.....+......+.| +++.+++.. .+ | .+.+++ .+. .......|
T Consensus 78 ~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~-~d---------~--~i~~~d-~~~-~~~~~~~~ 141 (313)
T 3odt_A 78 GKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGS-WD---------K--TAKVWK-EGS-LVYNLQAH 141 (313)
T ss_dssp ETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEE-TT---------S--EEEEEE-TTE-EEEEEECC
T ss_pred cCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEe-CC---------C--CEEEEc-CCc-EEEecccC
Confidence 35678999999874334556666667778888889 566665542 11 2 244555 332 22233357
Q ss_pred CCCeEEEEECc-CCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC
Q 020756 82 EGPVHDVQWSY-SGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD 157 (321)
Q Consensus 82 ~~~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~ 157 (321)
..+|.++.|+| +++.|++. ..++.+.+||.. ..+..+ +...+.++.|+|+|. |++++ .++.|++||+++
T Consensus 142 ~~~v~~~~~~~~~~~~l~~~--~~d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~---~dg~i~i~d~~~ 214 (313)
T 3odt_A 142 NASVWDAKVVSFSENKFLTA--SADKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDGH-FISCS---NDGLIKLVDMHT 214 (313)
T ss_dssp SSCEEEEEEEETTTTEEEEE--ETTSCEEEEETT-EEEEEECSSCSSCEEEEEEEETTE-EEEEE---TTSEEEEEETTT
T ss_pred CCceeEEEEccCCCCEEEEE--ECCCCEEEEecC-ceEEEEeccCcccEEEEEEcCCCe-EEEcc---CCCeEEEEECCc
Confidence 89999999998 88888874 668899999953 334333 678899999999999 77777 889999999999
Q ss_pred CeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCcee--EEeccCceEEEEEecCCCC
Q 020756 158 GKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLF--FKKMFDKLFQAEWKPVSPD 225 (321)
Q Consensus 158 ~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l--~~~~~~~~~~~~w~P~~~~ 225 (321)
++.+..+..| .++.++|+|+| .|++++. |+.++|||+ +++++ ...+...+..+.|+|+...
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 280 (313)
T 3odt_A 215 GDVLRTYEGHESFVYCIKLLPNG-DIVSCGE------DRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDI 280 (313)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-CEEEEET------TSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred hhhhhhhhcCCceEEEEEEecCC-CEEEEec------CCEEEEEECCCCceeEEEeccCceEEEEEEccCCCE
Confidence 9999888766 78999999999 5777774 999999998 45554 4456678999999999873
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.76 E-value=8.2e-18 Score=153.65 Aligned_cols=198 Identities=9% Similarity=0.142 Sum_probs=144.7
Q ss_pred CceEEEEEcCCcCCCCceeeeeccc-----CccceEEeCCCC----CeeEEEEEecccCCCceeecceeEEEEEcCCCce
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFR-----CSTVQLNWNRGS----TGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE 74 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~-----~~~~~~~Wsp~G----~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~ 74 (321)
.+.|+||++.. ++.+.....+. .....+.|+|++ ++|++. .. ...+.+++......
T Consensus 43 ~~~v~vw~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~-----------dg~i~v~d~~~~~~ 107 (366)
T 3k26_A 43 SNRVTLYECHS---QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA-GS-----------RGIIRIINPITMQC 107 (366)
T ss_dssp TTEEEEEEECG---GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE-ET-----------TCEEEEECTTTCCE
T ss_pred CCEEEEEEcCC---CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe-cC-----------CCEEEEEEchhceE
Confidence 56899999998 56665555433 557899999994 455543 21 12356666654433
Q ss_pred eeeecCCCCCeEEEEECc-CCCEEEEEEccCCCeEEEEeCCC-ceeEEe-----CCcCeeeEEEcCCCCeEEEEccCCCC
Q 020756 75 GLVPLRKEGPVHDVQWSY-SGSEFAVVYGFMPASATIFNKKC-RPILEL-----GSGPYNTVRWNPKGKFLCLAGFGNLP 147 (321)
Q Consensus 75 ~~v~l~~~~~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~-----~~~~~~~~~~sPdG~~l~~~g~~n~~ 147 (321)
......|.++|.+++|+| +++.|++. ..++.|.+||++. ..+..+ +...+.++.|+|+|++|++++ .+
T Consensus 108 ~~~~~~~~~~i~~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d 182 (366)
T 3k26_A 108 IKHYVGHGNAINELKFHPRDPNLLLSV--SKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG---MD 182 (366)
T ss_dssp EEEEESCCSCEEEEEECSSCTTEEEEE--ETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE---TT
T ss_pred eeeecCCCCcEEEEEECCCCCCEEEEE--eCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec---CC
Confidence 333335889999999999 88888884 6688999999964 455554 678899999999999999999 89
Q ss_pred CcEEEEECCCCeEEEeee------------------------------CCCeeeEEEccCCCEEEEEEcCCceeecCcEE
Q 020756 148 GDMAFWDYVDGKQLGTTR------------------------------AECSVTSEWSPDGRYFMTATTAPRLQIDNGIK 197 (321)
Q Consensus 148 g~i~iwD~~~~~~i~~~~------------------------------~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~ 197 (321)
+.|++||+++++.+..+. ...+.+++|+ |++|++++. |+.++
T Consensus 183 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~------d~~i~ 254 (366)
T 3k26_A 183 HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC------ENAIV 254 (366)
T ss_dssp SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS------SSEEE
T ss_pred CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec------CCEEE
Confidence 999999998775443222 2278889998 789999984 99999
Q ss_pred EEeecCc---------------ee--EEeccCceEEEEEecC--CCCCCCC
Q 020756 198 IFHHNGS---------------LF--FKKMFDKLFQAEWKPV--SPDKFGD 229 (321)
Q Consensus 198 iw~~~g~---------------~l--~~~~~~~~~~~~w~P~--~~~~~~~ 229 (321)
|||+... .+ +..+...+..+.|+|+ +..++..
T Consensus 255 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~ 305 (366)
T 3k26_A 255 CWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALG 305 (366)
T ss_dssp EEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEE
T ss_pred EEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEE
Confidence 9998432 12 3345567888999998 6666643
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.76 E-value=2.1e-16 Score=146.35 Aligned_cols=201 Identities=17% Similarity=0.210 Sum_probs=144.7
Q ss_pred CCCceEEEEEcCCcCCCCceeeee-------------cccCccceEEeCCC-CCeeEEEEEecccCCCceeecceeEEEE
Q 020756 2 GSPASVQIYACGKDLQSQPLARRS-------------FFRCSTVQLNWNRG-STGLLAVAQSDVDKTNQSYYGESKLNYL 67 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~-------------~f~~~~~~~~Wsp~-G~~l~~~~~~d~d~t~~s~~g~~~l~~l 67 (321)
+..+.|+||++.+ +....... .+......+.|+|+ ++.|+.. .. ...+.++
T Consensus 63 ~~dg~i~iw~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~-----------d~~i~iw 127 (408)
T 4a11_B 63 GSDGVIVLYDLEN---SSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS-SF-----------DKTLKVW 127 (408)
T ss_dssp ETTSCEEEEECCC---CSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE-ET-----------TSEEEEE
T ss_pred cCCCeEEEEECCC---CcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE-eC-----------CCeEEEe
Confidence 3578899999998 34333332 26678889999994 4555443 21 1235666
Q ss_pred EcCCCceeeeecCCCCCeEEEEECcCCC---EEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCe-EEE
Q 020756 68 TTDGTHEGLVPLRKEGPVHDVQWSYSGS---EFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKF-LCL 140 (321)
Q Consensus 68 ~~~g~~~~~v~l~~~~~v~~~~wsP~g~---~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~-l~~ 140 (321)
+.... .....+.+...+..+.|+|.+. .|++ +..++.+.+||++. ..+..+ |...+.++.|+|++++ |++
T Consensus 128 d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~ 204 (408)
T 4a11_B 128 DTNTL-QTADVFNFEETVYSHHMSPVSTKHCLVAV--GTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILAT 204 (408)
T ss_dssp ETTTT-EEEEEEECSSCEEEEEECSSCSSCCEEEE--EESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEE
T ss_pred eCCCC-ccceeccCCCceeeeEeecCCCCCcEEEE--EcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEE
Confidence 66654 3344445788999999999554 6666 46788999999964 455555 7889999999999995 677
Q ss_pred EccCCCCCcEEEEECCCCe-EEEee---------------eCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 141 AGFGNLPGDMAFWDYVDGK-QLGTT---------------RAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 141 ~g~~n~~g~i~iwD~~~~~-~i~~~---------------~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
++ .+|.|++||++++. ++..+ ..+ .+..++|+|+|++|++++. |+.++|||+.
T Consensus 205 ~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~vwd~~ 275 (408)
T 4a11_B 205 AS---ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT------DNRMRLWNSS 275 (408)
T ss_dssp EE---TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET------TSCEEEEETT
T ss_pred Ec---CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC------CCeEEEEECC
Confidence 77 88999999998764 33332 222 6888999999999999995 8888888873
Q ss_pred C------------------------------------------------cee--EEeccCceEEEEEecCCCCCCCC
Q 020756 203 G------------------------------------------------SLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 203 g------------------------------------------------~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
. +.+ +..|...+..+.|+|+...+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 276 NGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp TCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred CCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEE
Confidence 2 122 23466789999999998877765
No 98
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.76 E-value=8.5e-17 Score=167.00 Aligned_cols=190 Identities=13% Similarity=0.218 Sum_probs=140.9
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||+... .+.+.... .+..+..+.|+| |++|+.. +. ...+.++++... .....+.+.
T Consensus 37 ~Dg~I~lw~~~~---~~~~~~~~-~~~~V~~l~fsp-g~~L~S~-s~-----------D~~v~lWd~~~~-~~~~~~~~~ 98 (902)
T 2oaj_A 37 VTGEVHIYGQQQ---VEVVIKLE-DRSAIKEMRFVK-GIYLVVI-NA-----------KDTVYVLSLYSQ-KVLTTVFVP 98 (902)
T ss_dssp TTSEEEEECSTT---CEEEEECS-SCCCEEEEEEET-TTEEEEE-ET-----------TCEEEEEETTTC-SEEEEEECS
T ss_pred CCCEEEEEeCCC---cEEEEEcC-CCCCEEEEEEcC-CCEEEEE-EC-----------cCeEEEEECCCC-cEEEEEcCC
Confidence 468999999876 44433322 356788999999 8855543 21 123566666544 233334467
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEE------------e--CCcCeeeEEEcCCC-CeEEEEccCCCC
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILE------------L--GSGPYNTVRWNPKG-KFLCLAGFGNLP 147 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~------------~--~~~~~~~~~~sPdG-~~l~~~g~~n~~ 147 (321)
+.|.+++|+|+|++|++ |..++.|.+||++...... + |.+.+.+++|+|++ ..|++++ .+
T Consensus 99 ~~V~~v~~sp~g~~l~s--gs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~---~d 173 (902)
T 2oaj_A 99 GKITSIDTDASLDWMLI--GLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY---EY 173 (902)
T ss_dssp SCEEEEECCTTCSEEEE--EETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC---SS
T ss_pred CCEEEEEECCCCCEEEE--EcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe---CC
Confidence 89999999999999988 5678999999997654321 1 56789999999964 6777776 78
Q ss_pred CcEEEEECCCCeEEEeeeCC--------------------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCcee
Q 020756 148 GDMAFWDYVDGKQLGTTRAE--------------------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLF 206 (321)
Q Consensus 148 g~i~iwD~~~~~~i~~~~~~--------------------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l 206 (321)
+.| +||+++++++..+..+ .+.+++|+|||++|++++. |+.|+|||+ +|+++
T Consensus 174 g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~------Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 174 VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE------DNSLVFWDANSGHMI 246 (902)
T ss_dssp CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET------TCCEEEEETTTCCEE
T ss_pred CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC------CCeEEEEECCCCcEE
Confidence 999 9999999888777543 4889999999999999995 999999999 56665
Q ss_pred EE--e-----c-------------cCceEEEEEecC
Q 020756 207 FK--K-----M-------------FDKLFQAEWKPV 222 (321)
Q Consensus 207 ~~--~-----~-------------~~~~~~~~w~P~ 222 (321)
.. . + ...++.++|+|.
T Consensus 247 ~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~ 282 (902)
T 2oaj_A 247 MARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCE 282 (902)
T ss_dssp EEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEEC
T ss_pred EEEeecccccCCCCCcCCCCCccccCCeeEEEEEec
Confidence 32 1 1 236899999764
No 99
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.8e-17 Score=162.31 Aligned_cols=199 Identities=9% Similarity=0.021 Sum_probs=139.5
Q ss_pred CCCceEEEEEcCCcCC--------CCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc
Q 020756 2 GSPASVQIYACGKDLQ--------SQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH 73 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~--------~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~ 73 (321)
+.++.|+||++..... ..+.............+.|++++ .|+. .+.| | .+.++++....
T Consensus 232 s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~las-gs~D---------g--tV~lWD~~~~~ 298 (524)
T 2j04_B 232 SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVC-GFKN---------G--FVAEFDLTDPE 298 (524)
T ss_dssp ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEE-EETT---------S--EEEEEETTBCS
T ss_pred ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEE-EeCC---------C--EEEEEECCCCC
Confidence 3578999999986210 01122333455677899999864 4433 2211 3 35556665331
Q ss_pred ee-eeecCCCCCeEEE--EECcCC-CEEEEEEccCCCeEEEEeCCCc-eeEEe--CC--cCeeeEEEcCCCCeEEEEccC
Q 020756 74 EG-LVPLRKEGPVHDV--QWSYSG-SEFAVVYGFMPASATIFNKKCR-PILEL--GS--GPYNTVRWNPKGKFLCLAGFG 144 (321)
Q Consensus 74 ~~-~v~l~~~~~v~~~--~wsP~g-~~l~~~~g~~~~~i~i~d~~~~-~~~~~--~~--~~~~~~~~sPdG~~l~~~g~~ 144 (321)
.. .....|.++|.++ .|+|+| ..|+++ ..|++|+|||++.. .+..+ +. ..+.+++|+|+|+.|++++
T Consensus 299 ~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~--S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~-- 374 (524)
T 2j04_B 299 VPSFYDQVHDSYILSVSTAYSDFEDTVVSTV--AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSD-- 374 (524)
T ss_dssp SCSEEEECSSSCEEEEEEECCTTSCCEEEEE--ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEEC--
T ss_pred CceEEeecccccEEEEEEEcCCCCCeEEEEe--ccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeC--
Confidence 22 2223588999999 678998 777774 67999999999642 22222 22 3578999999999999988
Q ss_pred CCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE--ec-----cCceE
Q 020756 145 NLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK--KM-----FDKLF 215 (321)
Q Consensus 145 n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~--~~-----~~~~~ 215 (321)
.++.|++||++++.++.++..| .++.++|||+|++|++++. |+.|+||++.++.+.. .. ...++
T Consensus 375 -~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~------Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~ 447 (524)
T 2j04_B 375 -GASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSA------DGSLIITNAARRLLHGIKNSSATQKSLRLW 447 (524)
T ss_dssp -SSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEET------TTEEECCBSCSSTTTCC------CCCCEEE
T ss_pred -CCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEEC------CCEEEEEechHhhccccccCccceeeeEEE
Confidence 7889999999998776666665 7899999999999999994 9999999997664422 11 11478
Q ss_pred EEEEecCCC
Q 020756 216 QAEWKPVSP 224 (321)
Q Consensus 216 ~~~w~P~~~ 224 (321)
.++|+|+..
T Consensus 448 ~v~~sp~g~ 456 (524)
T 2j04_B 448 KWDYSIKDD 456 (524)
T ss_dssp ECBCCSSSC
T ss_pred EeccCCCCC
Confidence 889999875
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.76 E-value=1.2e-16 Score=156.27 Aligned_cols=202 Identities=18% Similarity=0.216 Sum_probs=152.4
Q ss_pred CceEEEEEcCCcCCC----CceeeeecccCc-cceEEeCC--CCCeeEEEEEecccCCCceeecceeEEEEEcC------
Q 020756 4 PASVQIYACGKDLQS----QPLARRSFFRCS-TVQLNWNR--GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTD------ 70 (321)
Q Consensus 4 p~~v~v~~~~~~~~~----~~i~~~~~f~~~-~~~~~Wsp--~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~------ 70 (321)
.+.|+||++.+ + +.+.....+... +..+.|+| +|++|++... | |...+|.+...
T Consensus 38 ~~~v~v~~~~~---~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~-d---------g~v~vw~~~~~~~~~~~ 104 (615)
T 1pgu_A 38 GKSAFVRCLDD---GDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE-S---------GKVIVWGWTFDKESNSV 104 (615)
T ss_dssp TTEEEEEECCS---SCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET-T---------SEEEEEEEEEEGGGTEE
T ss_pred CCeEEEEECCC---CCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC-C---------CEEEEEeCCCCcccccc
Confidence 46899999997 5 667777767777 88999999 9998877521 1 33334444211
Q ss_pred CCceeeeecCCCCCeEEEEECcCCCEEEEEEccCC--CeEEEEeCCCceeEEe--CCcCeeeEEEcCCCC-eEEEEccCC
Q 020756 71 GTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMP--ASATIFNKKCRPILEL--GSGPYNTVRWNPKGK-FLCLAGFGN 145 (321)
Q Consensus 71 g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~--~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~-~l~~~g~~n 145 (321)
..........|..+|.+++|+|+|++|+++....+ +.+.+|| .+..+..+ |...+.++.|+|+|+ +|++++
T Consensus 105 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--- 180 (615)
T 1pgu_A 105 EVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVG--- 180 (615)
T ss_dssp EEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEE---
T ss_pred cccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEe---
Confidence 11111122247889999999999999998743322 5788888 44556665 788999999999998 677787
Q ss_pred CCCcEEEEECCCCeEEEeeeCC-----CeeeEEEccC-CCEEEEEEcCCceeecCcEEEEee-cCceeEE------eccC
Q 020756 146 LPGDMAFWDYVDGKQLGTTRAE-----CSVTSEWSPD-GRYFMTATTAPRLQIDNGIKIFHH-NGSLFFK------KMFD 212 (321)
Q Consensus 146 ~~g~i~iwD~~~~~~i~~~~~~-----~~~~~~wSpd-G~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~------~~~~ 212 (321)
.++.|++||+.+++.+..+..+ .+.+++|+|+ |++|++++. |+.++|||+ +++.+.. .+..
T Consensus 181 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 181 DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS------DRKISCFDGKSGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET------TCCEEEEETTTCCEEEECCBTTBCCCS
T ss_pred CCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC------CCeEEEEECCCCCEeEEecccccccCC
Confidence 8899999999999998888765 4788999999 999999994 999999998 4555532 5667
Q ss_pred ceEEEEEecCCCCCCCC
Q 020756 213 KLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 213 ~~~~~~w~P~~~~~~~~ 229 (321)
.+..+.|+ +...++..
T Consensus 255 ~v~~~~~~-~~~~l~~~ 270 (615)
T 1pgu_A 255 GIFALSWL-DSQKFATV 270 (615)
T ss_dssp CEEEEEES-SSSEEEEE
T ss_pred ceEEEEEc-CCCEEEEE
Confidence 89999999 77666654
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.75 E-value=1.4e-17 Score=177.19 Aligned_cols=199 Identities=11% Similarity=0.135 Sum_probs=158.1
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++++ ++.+.....+...+..+.|+|+|++|+.... . | .+.+++.... .......|.
T Consensus 981 ~~g~i~i~d~~~---~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~-----d-----g--~i~vwd~~~~-~~~~~~~~~ 1044 (1249)
T 3sfz_A 981 EDGAIKIIELPN---NRVFSSGVGHKKAVRHIQFTADGKTLISSSE-----D-----S--VIQVWNWQTG-DYVFLQAHQ 1044 (1249)
T ss_dssp TTSCCEEEETTT---TSCEEECCCCSSCCCCEEECSSSSCEEEECS-----S-----S--BEEEEETTTT-EEECCBCCS
T ss_pred CCCCEEEEEcCC---CceeeecccCCCceEEEEECCCCCEEEEEcC-----C-----C--EEEEEECCCC-ceEEEecCC
Confidence 457899999998 6777777777788889999999999877421 1 2 2556666554 333444688
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK 159 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~ 159 (321)
..|.++.|+|++.. ++ +..++.+.+||+. +..+..+ |...+.++.|+|+|++|++++ .++.|++||+.+++
T Consensus 1045 ~~v~~~~~~~~~~l-~~--~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s---~d~~v~iwd~~~~~ 1118 (1249)
T 3sfz_A 1045 ETVKDFRLLQDSRL-LS--WSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTS---ADKTAKIWSFDLLS 1118 (1249)
T ss_dssp SCEEEEEECSSSEE-EE--EESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEEC---CSSCCCEECSSSSS
T ss_pred CcEEEEEEcCCCcE-EE--EECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEc---CCCcEEEEECCCcc
Confidence 99999999998754 33 3568899999995 4444555 788999999999999999998 89999999999998
Q ss_pred EEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeE-----------EeccCceEEEEEecCCCC
Q 020756 160 QLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFF-----------KKMFDKLFQAEWKPVSPD 225 (321)
Q Consensus 160 ~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~-----------~~~~~~~~~~~w~P~~~~ 225 (321)
++..+..| .+++++|||||++|++++. |+.|+|||+. |+.+. ..+...+..++|+|++..
T Consensus 1119 ~~~~l~~h~~~v~~~~~s~dg~~lat~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~ 1192 (1249)
T 3sfz_A 1119 PLHELKGHNGCVRCSAFSLDGILLATGDD------NGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT 1192 (1249)
T ss_dssp CSBCCCCCSSCEEEEEECSSSSEEEEEET------TSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSC
T ss_pred eeeeeccCCCcEEEEEECCCCCEEEEEeC------CCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCE
Confidence 88888776 6899999999999999994 9999999995 55442 346678999999999988
Q ss_pred CCCC
Q 020756 226 KFGD 229 (321)
Q Consensus 226 ~~~~ 229 (321)
++..
T Consensus 1193 l~s~ 1196 (1249)
T 3sfz_A 1193 LVSA 1196 (1249)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 8765
No 102
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.75 E-value=4.1e-16 Score=139.94 Aligned_cols=219 Identities=14% Similarity=0.193 Sum_probs=153.8
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecc--cCccceEEeCCCCCeeEEEEEecc-----c-CCCcee---e-----------
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFF--RCSTVQLNWNRGSTGLLAVAQSDV-----D-KTNQSY---Y----------- 59 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f--~~~~~~~~Wsp~G~~l~~~~~~d~-----d-~t~~s~---~----------- 59 (321)
|..+.|+||++.+ ++.+....+. ...+..+.|+|+|++|+... .|. + .+++.. .
T Consensus 42 g~D~tV~iWd~~t---g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs-~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~ 117 (318)
T 4ggc_A 42 ALDNSVYLWSASS---GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-SSAEVQLWDVQQQKRLRNMTSHSARVGSLSW 117 (318)
T ss_dssp EETTEEEEEETTT---CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EeCCEEEEEECCC---CCEEEEEEecCCCCeEEEEEECCCCCEEEEEE-CCCcEEEeecCCceeEEEecCccceEEEeec
Confidence 4578999999998 7777666543 34577899999999887643 110 0 111100 0
Q ss_pred ---------cceeEEEEEcCCC-ceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-----eeEEe--C
Q 020756 60 ---------GESKLNYLTTDGT-HEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-----PILEL--G 122 (321)
Q Consensus 60 ---------g~~~l~~l~~~g~-~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-----~~~~~--~ 122 (321)
....+..+..... ........|...+..+.|+++|++|++. ..|+.+.+||+... ..... +
T Consensus 118 ~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~--~~d~~i~iwd~~~~~~~~~~~~~~~~~ 195 (318)
T 4ggc_A 118 NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG--GNDNLVNVWPSAPGEGGWVPLQTFTQH 195 (318)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE--ETTSCEEEEESSCBTTBSCCSEEECCC
T ss_pred CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEE--ecCcceeEEECCCCcccccceeeeccc
Confidence 0000111111111 1112223578899999999999998884 66899999998532 12222 6
Q ss_pred CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee
Q 020756 123 SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 123 ~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
...+..+.|+|++..++....+..++.|++||............. .+..+.|+|++.++++++.. .|+.|+|||+
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~----~d~~i~iwd~ 271 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF----AQNQLVIWKY 271 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT----TTCCEEEEET
T ss_pred CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc----CCCEEEEEEC
Confidence 778999999999887766544557899999999988777666554 78889999999999987632 3899999998
Q ss_pred -cCcee--EEeccCceEEEEEecCCCCCCCCc
Q 020756 202 -NGSLF--FKKMFDKLFQAEWKPVSPDKFGDI 230 (321)
Q Consensus 202 -~g~~l--~~~~~~~~~~~~w~P~~~~~~~~~ 230 (321)
+++++ +..|...|..++|+|++..+++..
T Consensus 272 ~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 272 PTMAKVAELKGHTSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 46666 456888999999999998888753
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.75 E-value=5.3e-17 Score=147.47 Aligned_cols=195 Identities=13% Similarity=0.069 Sum_probs=144.1
Q ss_pred CCceEEEEEc-CCcCCCCceeeeec--ccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCC--C-----
Q 020756 3 SPASVQIYAC-GKDLQSQPLARRSF--FRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDG--T----- 72 (321)
Q Consensus 3 ~p~~v~v~~~-~~~~~~~~i~~~~~--f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g--~----- 72 (321)
..+.|+||++ .. + ....... +......+.|+| ++.|+... .| | .+.+++... .
T Consensus 77 ~dg~i~~wd~~~~---~-~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~-~d---------~--~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 77 VQGEILKVDLIGS---P-SFQALTNNEANLGICRICKYG-DDKLIAAS-WD---------G--LIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp TTSCEEEECSSSS---S-SEEECBSCCCCSCEEEEEEET-TTEEEEEE-TT---------S--EEEEECHHHHTTBCEEE
T ss_pred CCCeEEEEEeccC---C-ceEeccccCCCCceEEEEeCC-CCEEEEEc-CC---------C--eEEEEcccccccccccc
Confidence 5688999999 76 3 3344444 667788999999 88776642 11 2 244444432 0
Q ss_pred -ceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-c--eeE--Ee-CCcCeeeEEEcC-CCCeEEEEccC
Q 020756 73 -HEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-R--PIL--EL-GSGPYNTVRWNP-KGKFLCLAGFG 144 (321)
Q Consensus 73 -~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~--~~~--~~-~~~~~~~~~~sP-dG~~l~~~g~~ 144 (321)
......+.+.+.|.+++|+|++ |++ +..++.+.+||++. . ... .. +...+.++.|+| +|++|++++
T Consensus 140 ~~~~~~~~~~~~~v~~~~~~~~~--l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-- 213 (342)
T 1yfq_A 140 KNLNSNNTKVKNKIFTMDTNSSR--LIV--GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS-- 213 (342)
T ss_dssp EESCSSSSSSCCCEEEEEECSSE--EEE--EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE--
T ss_pred cCCeeeEEeeCCceEEEEecCCc--EEE--EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe--
Confidence 1223334588999999999988 555 46788999999976 2 222 22 677899999999 999999999
Q ss_pred CCCCcEEEEECCCC------eEEEeeeCC-----------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee
Q 020756 145 NLPGDMAFWDYVDG------KQLGTTRAE-----------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF 206 (321)
Q Consensus 145 n~~g~i~iwD~~~~------~~i~~~~~~-----------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l 206 (321)
.+|.|.+||++.. +.+..+..+ .+..++|+|+|++|++++. |+.|+|||+. ++++
T Consensus 214 -~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 214 -IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS------DGIISCWNLQTRKKI 286 (342)
T ss_dssp -TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET------TSCEEEEETTTTEEE
T ss_pred -cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC------CceEEEEcCccHhHh
Confidence 8999999999876 566666655 7889999999999999994 9999999995 5555
Q ss_pred E--Eec-cCceEEEEEecCCCCCCCC
Q 020756 207 F--KKM-FDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 207 ~--~~~-~~~~~~~~w~P~~~~~~~~ 229 (321)
. ..+ ...+..+. |++..+++.
T Consensus 287 ~~~~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 287 KNFAKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp EECCCCSSSEEEEEE--ECSSEEEEE
T ss_pred hhhhcccCCCceEec--CCCCeEEEE
Confidence 3 344 67788888 888777765
No 104
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.75 E-value=5.9e-16 Score=145.65 Aligned_cols=210 Identities=10% Similarity=0.038 Sum_probs=153.5
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|++|++.. ++.+............+.|+|+|+.+++.... ...|+.++.... .....+...
T Consensus 189 ~d~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~i~~~d~~~~-~~~~~~~~~ 253 (433)
T 3bws_A 189 QANAVHVFDLKT---LAYKATVDLTGKWSKILLYDPIRDLVYCSNWI-----------SEDISVIDRKTK-LEIRKTDKI 253 (433)
T ss_dssp GGTEEEEEETTT---CCEEEEEECSSSSEEEEEEETTTTEEEEEETT-----------TTEEEEEETTTT-EEEEECCCC
T ss_pred CCCEEEEEECCC---ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC-----------CCcEEEEECCCC-cEEEEecCC
Confidence 357899999988 67776666566678899999999998775311 124677777554 333444556
Q ss_pred CCeEEEEECcCCCEEEEEEcc------CCCeEEEEeCCCc-eeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEE
Q 020756 83 GPVHDVQWSYSGSEFAVVYGF------MPASATIFNKKCR-PILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWD 154 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~------~~~~i~i~d~~~~-~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD 154 (321)
+.+.+++|+|+|+.+++.... .++.|.+||+... .+..+ +...+..+.|+|+|+.|++++. .++.|.+||
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~--~~~~v~v~d 331 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM--CCSKIEVYD 331 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEET--TTTEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEec--CCCEEEEEE
Confidence 679999999999988886421 3679999999654 33334 4567889999999987766541 679999999
Q ss_pred CCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCce---------eecCcEEEEee-cCceeEE-eccCceEEEEEecC
Q 020756 155 YVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRL---------QIDNGIKIFHH-NGSLFFK-KMFDKLFQAEWKPV 222 (321)
Q Consensus 155 ~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl---------~~d~~v~iw~~-~g~~l~~-~~~~~~~~~~w~P~ 222 (321)
+.+++.+..+... .+..++|+|||++|+++...... ..|+.+++||. +++.+.. .....+..+.|+|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d 411 (433)
T 3bws_A 332 LKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPD 411 (433)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred CCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCC
Confidence 9999888777654 78899999999999988842100 01458999998 4555533 23457899999999
Q ss_pred CCCCCCC
Q 020756 223 SPDKFGD 229 (321)
Q Consensus 223 ~~~~~~~ 229 (321)
+..++..
T Consensus 412 g~~l~~~ 418 (433)
T 3bws_A 412 NRYLVIS 418 (433)
T ss_dssp SCEEEEE
T ss_pred CCEEEEE
Confidence 8877643
No 105
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.75 E-value=4.1e-16 Score=148.38 Aligned_cols=197 Identities=13% Similarity=0.106 Sum_probs=149.0
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ ++.+.....+...+..+.|++++ . ++....| | .+.+++............|
T Consensus 139 s~dg~i~vwd~~~---~~~~~~~~~h~~~V~~l~~~~~~-~-l~s~s~d---------g--~i~vwd~~~~~~~~~~~~h 202 (464)
T 3v7d_B 139 ADDKMIRVYDSIN---KKFLLQLSGHDGGVWALKYAHGG-I-LVSGSTD---------R--TVRVWDIKKGCCTHVFEGH 202 (464)
T ss_dssp ETTSCEEEEETTT---TEEEEEECCCSSCEEEEEECSTT-E-EEEEETT---------S--CEEEEETTTTEEEEEECCC
T ss_pred cCCCcEEEEECCC---CcEEEEEeCCCcCEEEEEEcCCC-E-EEEEeCC---------C--CEEEEECCCCcEEEEECCC
Confidence 4578999999998 78888888788899999999988 3 3333221 2 2566666555333333358
Q ss_pred CCCeEEEEECc--CCCEEEEEEccCCCeEEEEeCCCce------------------------eEEe--CCcCeeeEEEcC
Q 020756 82 EGPVHDVQWSY--SGSEFAVVYGFMPASATIFNKKCRP------------------------ILEL--GSGPYNTVRWNP 133 (321)
Q Consensus 82 ~~~v~~~~wsP--~g~~l~~~~g~~~~~i~i~d~~~~~------------------------~~~~--~~~~~~~~~~sP 133 (321)
.++|.+++|++ ++..|++ +..++.+.+||+.... +..+ |...+.++ +|
T Consensus 203 ~~~v~~l~~~~~~~~~~l~s--~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 278 (464)
T 3v7d_B 203 NSTVRCLDIVEYKNIKYIVT--GSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG 278 (464)
T ss_dssp SSCEEEEEEEESSSCEEEEE--EETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE
T ss_pred CCccEEEEEecCCCCCEEEE--EcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC
Confidence 89999999984 6677776 4678999999985432 2233 44445544 78
Q ss_pred CCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCcee--EE
Q 020756 134 KGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLF--FK 208 (321)
Q Consensus 134 dG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l--~~ 208 (321)
+|++|++++ .++.|++||+.+++++..+..| .+..+.|+|+|++|++++. |+.++|||+ +|+.+ +.
T Consensus 279 ~~~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~ 349 (464)
T 3v7d_B 279 HGNIVVSGS---YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM------DTTIRIWDLENGELMYTLQ 349 (464)
T ss_dssp ETTEEEEEE---TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET------TSCEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEe---CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCcEEEEEe
Confidence 899999999 8999999999999999988776 7889999999999999994 999999998 56665 44
Q ss_pred eccCceEEEEEecCCCCCCCC
Q 020756 209 KMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 209 ~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.|...+..+.|++ ..+++.
T Consensus 350 ~h~~~v~~~~~~~--~~l~s~ 368 (464)
T 3v7d_B 350 GHTALVGLLRLSD--KFLVSA 368 (464)
T ss_dssp CCSSCEEEEEECS--SEEEEE
T ss_pred CCCCcEEEEEEcC--CEEEEE
Confidence 5777899999974 344443
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.75 E-value=3.8e-16 Score=144.62 Aligned_cols=177 Identities=11% Similarity=0.132 Sum_probs=128.5
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCC---eeEEEEEecccCCCceeecceeEEEEEcCCCceeeee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGST---GLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP 78 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~---~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~ 78 (321)
+..+.|+||++.. ++.+.... +......+.|++.+. .+++.. .+ | .+++++..........
T Consensus 119 ~~d~~i~iwd~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~--~v~~~d~~~~~~~~~~ 182 (408)
T 4a11_B 119 SFDKTLKVWDTNT---LQTADVFN-FEETVYSHHMSPVSTKHCLVAVGT-RG---------P--KVQLCDLKSGSCSHIL 182 (408)
T ss_dssp ETTSEEEEEETTT---TEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEE-SS---------S--SEEEEESSSSCCCEEE
T ss_pred eCCCeEEEeeCCC---Cccceecc-CCCceeeeEeecCCCCCcEEEEEc-CC---------C--eEEEEeCCCcceeeee
Confidence 3578999999998 56665555 456777888988554 554432 11 2 2556666544333333
Q ss_pred cCCCCCeEEEEECcCCCE-EEEEEccCCCeEEEEeCCCc--eeEE-----------------eCCcCeeeEEEcCCCCeE
Q 020756 79 LRKEGPVHDVQWSYSGSE-FAVVYGFMPASATIFNKKCR--PILE-----------------LGSGPYNTVRWNPKGKFL 138 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~-l~~~~g~~~~~i~i~d~~~~--~~~~-----------------~~~~~~~~~~~sPdG~~l 138 (321)
..|.++|.+++|+|++++ |++ +..++.+.+||++.. .+.. .+...+.++.|+|+|++|
T Consensus 183 ~~~~~~v~~~~~~~~~~~ll~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 260 (408)
T 4a11_B 183 QGHRQEILAVSWSPRYDYILAT--ASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHL 260 (408)
T ss_dssp CCCCSCEEEEEECSSCTTEEEE--EETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEE
T ss_pred cCCCCcEEEEEECCCCCcEEEE--EcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEE
Confidence 358899999999999996 555 467899999998532 2222 256789999999999999
Q ss_pred EEEccCCCCCcEEEEECCCC-----------------------------------------------eEEEeeeCC--Ce
Q 020756 139 CLAGFGNLPGDMAFWDYVDG-----------------------------------------------KQLGTTRAE--CS 169 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~-----------------------------------------------~~i~~~~~~--~~ 169 (321)
++++ .++.|++||+.++ +.+..+..| .+
T Consensus 261 ~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v 337 (408)
T 4a11_B 261 LTVG---TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTV 337 (408)
T ss_dssp EEEE---TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCE
T ss_pred EEec---CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeE
Confidence 9998 7888888887653 345555555 68
Q ss_pred eeEEEccCCCEEEEEEcCCceeecCcEEEEeecCce
Q 020756 170 VTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSL 205 (321)
Q Consensus 170 ~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~ 205 (321)
+.++|+|||++|++++. |+.++||++....
T Consensus 338 ~~~~~s~~~~~l~s~~~------dg~i~iw~~~~~~ 367 (408)
T 4a11_B 338 DCCVFQSNFQELYSGSR------DCNILAWVPSLYE 367 (408)
T ss_dssp EEEEEETTTTEEEEEET------TSCEEEEEECC--
T ss_pred EEEEEcCCCCEEEEECC------CCeEEEEeCCCCC
Confidence 88999999999999995 9999999996443
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.1e-16 Score=147.06 Aligned_cols=195 Identities=9% Similarity=0.090 Sum_probs=130.5
Q ss_pred CCCceEEEEEcCCc------CCCCceeeee-cccCccceEEeCC--CCCeeEEEEEecccCCCceeecceeEEEEEcCCC
Q 020756 2 GSPASVQIYACGKD------LQSQPLARRS-FFRCSTVQLNWNR--GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT 72 (321)
Q Consensus 2 g~p~~v~v~~~~~~------~~~~~i~~~~-~f~~~~~~~~Wsp--~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~ 72 (321)
+..+.|+||+.... ..++.+.... -+......+.|+| +|++++... .| | .+.+++....
T Consensus 92 s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-~d---------g--~i~~wd~~~~ 159 (343)
T 3lrv_A 92 GPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWAD-NR---------G--TIGFQSYEDD 159 (343)
T ss_dssp CSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEE-TT---------C--CEEEEESSSS
T ss_pred cCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe-CC---------C--cEEEEECCCC
Confidence 45678899876631 0123233322 2235688999999 999887642 11 2 2555665544
Q ss_pred ceeeee-cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-ee-EEe---CCcCeeeEEEcCCCCeEEEEccCCC
Q 020756 73 HEGLVP-LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PI-LEL---GSGPYNTVRWNPKGKFLCLAGFGNL 146 (321)
Q Consensus 73 ~~~~v~-l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~-~~~---~~~~~~~~~~sPdG~~l~~~g~~n~ 146 (321)
....+. ..+...|.+++|+|+|..|++ |..++.|+|||++.. .+ ..+ |...+.++.|+|+|.+|++++ .
T Consensus 160 ~~~~~~~~~~~~~i~~~~~~pdg~~las--g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~---~ 234 (343)
T 3lrv_A 160 SQYIVHSAKSDVEYSSGVLHKDSLLLAL--YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC---D 234 (343)
T ss_dssp CEEEEECCCSSCCCCEEEECTTSCEEEE--ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE---S
T ss_pred cEEEEEecCCCCceEEEEECCCCCEEEE--EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe---C
Confidence 332222 345668999999999999888 578999999999643 33 344 678999999999999999997 4
Q ss_pred CCcEEEEECCCCeEEEeeeC---C--Ce--eeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-eeEEeccCceEEEE
Q 020756 147 PGDMAFWDYVDGKQLGTTRA---E--CS--VTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LFFKKMFDKLFQAE 218 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~~~---~--~~--~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l~~~~~~~~~~~~ 218 (321)
+ .|++||+++++.+..+.. + .+ ..++|+|+|++|++++. .|+.++||++... ..... ..+..+.
T Consensus 235 ~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~-----~d~~i~v~~~~~~~~~~~~--~~~~~~~ 306 (343)
T 3lrv_A 235 Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN-----ESNSLTIYKFDKKTKNWTK--DEESALC 306 (343)
T ss_dssp S-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET-----TTTEEEEEEECTTTCSEEE--EEEEECC
T ss_pred C-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC-----CCCcEEEEEEcccccceEe--cCceeEe
Confidence 4 999999998866544432 2 22 35999999999999883 2889999999432 22221 3445566
Q ss_pred Eec
Q 020756 219 WKP 221 (321)
Q Consensus 219 w~P 221 (321)
|.|
T Consensus 307 ~~~ 309 (343)
T 3lrv_A 307 LQS 309 (343)
T ss_dssp C--
T ss_pred cCc
Confidence 666
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1e-15 Score=136.86 Aligned_cols=195 Identities=11% Similarity=0.107 Sum_probs=145.9
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc--e-eeee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH--E-GLVP 78 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~--~-~~v~ 78 (321)
+..+.|+||++.. +..+.....+......+.|+|+|++|++... . |. +..+++.... . ....
T Consensus 36 ~~dg~v~vw~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d-----g~--i~~~~~~~~~~~~~~~~~ 100 (313)
T 3odt_A 36 SRDGTVRLWSKDD---QWLGTVVYTGQGFLNSVCYDSEKELLLFGGK-----D-----TM--INGVPLFATSGEDPLYTL 100 (313)
T ss_dssp ETTSEEEEEEESS---SEEEEEEEECSSCEEEEEEETTTTEEEEEET-----T-----SC--EEEEETTCCTTSCC-CEE
T ss_pred EcCCcEEEEECCC---CEEEEEeecCCccEEEEEECCCCCEEEEecC-----C-----Ce--EEEEEeeecCCCCcccch
Confidence 3578999999987 6666666667888899999999998887531 1 22 3444443221 1 2222
Q ss_pred cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcC-CCCeEEEEccCCCCCcEEEEEC
Q 020756 79 LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNP-KGKFLCLAGFGNLPGDMAFWDY 155 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sP-dG~~l~~~g~~n~~g~i~iwD~ 155 (321)
..|...|.++.| +++.|++. ..++.+.+|| ....+..+ +...+.++.|+| ++++|++++ .++.|++||.
T Consensus 101 ~~~~~~i~~~~~--~~~~l~~~--~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~i~i~d~ 172 (313)
T 3odt_A 101 IGHQGNVCSLSF--QDGVVISG--SWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTAS---ADKTIKLWQN 172 (313)
T ss_dssp CCCSSCEEEEEE--ETTEEEEE--ETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEE---TTSCEEEEET
T ss_pred hhcccCEEEEEe--cCCEEEEE--eCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEE---CCCCEEEEec
Confidence 357899999999 56777774 6689999999 44455444 788999999998 999999998 8999999994
Q ss_pred CCCeEEEeeeC-C--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCCCCCC
Q 020756 156 VDGKQLGTTRA-E--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 156 ~~~~~i~~~~~-~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.+.+..+.. + .+..++|+|+|. |++++. |+.++|||+. ++.+ +..+...+..+.|+|+. .++..
T Consensus 173 --~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~ 242 (313)
T 3odt_A 173 --DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSN------DGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSC 242 (313)
T ss_dssp --TEEEEEECSSCSSCEEEEEEEETTE-EEEEET------TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEE
T ss_pred --CceEEEEeccCcccEEEEEEcCCCe-EEEccC------CCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEE
Confidence 455555544 3 788999999999 777774 9999999995 5555 44577899999999998 45543
No 109
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.74 E-value=1e-16 Score=146.05 Aligned_cols=178 Identities=17% Similarity=0.207 Sum_probs=124.2
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCC--CCeeEEEEEecccCCCceeecceeEEEEEcCCCce-eeee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRG--STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE-GLVP 78 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~--G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~-~~v~ 78 (321)
+.++.|+||++.+.. -..+.....+...+..+.|+|+ |.+|+.. +.| |...+|.+...+... ....
T Consensus 78 s~D~~v~iWd~~~~~-~~~~~~~~~h~~~V~~v~~~p~~~g~~lasg-s~D---------~~i~lwd~~~~~~~~~~~~~ 146 (316)
T 3bg1_A 78 SYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACG-SSD---------GAISLLTYTGEGQWEVKKIN 146 (316)
T ss_dssp ETTSCEEEECCSSSC-CCEEEEECCCSSCCCEEEECCTTTCSCEEEE-CSS---------SCEEEEEECSSSCEEECCBT
T ss_pred ECCCEEEEEECCCCc-ceEEEEccCCCCceEEEEECCCCCCcEEEEE-cCC---------CCEEEEecCCCCCcceeeee
Confidence 357899999998721 1234444445667889999998 5555543 211 333344332221111 1222
Q ss_pred cCCCCCeEEEEECcCC-----------------CEEEEEEccCCCeEEEEeCCCc----eeEEe--CCcCeeeEEEcCCC
Q 020756 79 LRKEGPVHDVQWSYSG-----------------SEFAVVYGFMPASATIFNKKCR----PILEL--GSGPYNTVRWNPKG 135 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g-----------------~~l~~~~g~~~~~i~i~d~~~~----~~~~~--~~~~~~~~~~sPdG 135 (321)
..|...|.++.|+|++ +.|++ +..|+.|+|||++.. .+..+ |...+.++.|+|++
T Consensus 147 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~ 224 (316)
T 3bg1_A 147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFAS--GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSI 224 (316)
T ss_dssp TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEEC--CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCS
T ss_pred ccccCCcceEEEccccCCccccccccccCccccceEEE--ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCC
Confidence 3477899999999983 56666 678999999998632 34444 77889999999997
Q ss_pred ----CeEEEEccCCCCCcEEEEECCCC-------eEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 136 ----KFLCLAGFGNLPGDMAFWDYVDG-------KQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 136 ----~~l~~~g~~n~~g~i~iwD~~~~-------~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
++|++++ .|+.|+|||+++. +.+..+ ...+..++|+|||++|++++. |+.++||+..
T Consensus 225 ~~~~~~las~s---~D~~v~iw~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~g~~las~~~------D~~v~lw~~~ 292 (316)
T 3bg1_A 225 GLPTSTIASCS---QDGRVFIWTCDDASSNTWSPKLLHKF-NDVVWHVSWSITANILAVSGG------DNKVTLWKES 292 (316)
T ss_dssp SCSCCEEEEEE---TTCEEEEEECSSTTCCCCBCCEEEEC-SSCEEEEEECTTTCCEEEEES------SSCEEEEEEC
T ss_pred CCCCceEEEEc---CCCeEEEEEccCccccchhhhhhhcC-CCcEEEEEEcCCCCEEEEEcC------CCeEEEEEEC
Confidence 8899999 9999999998762 122222 237889999999999999994 9999999974
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.74 E-value=1.4e-16 Score=144.77 Aligned_cols=201 Identities=6% Similarity=-0.005 Sum_probs=145.9
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCC-eeEEEEEecccCCCceeecceeEEEEEc-CCCceeeeec
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGST-GLLAVAQSDVDKTNQSYYGESKLNYLTT-DGTHEGLVPL 79 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~-~l~~~~~~d~d~t~~s~~g~~~l~~l~~-~g~~~~~v~l 79 (321)
+..+.|+||++.......++.....+......+.|+|+|+ +|++.. .+ | .|++++. .+... ....
T Consensus 30 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d---------g--~i~~wd~~~~~~~-~~~~ 96 (342)
T 1yfq_A 30 SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT-VQ---------G--EILKVDLIGSPSF-QALT 96 (342)
T ss_dssp ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-TT---------S--CEEEECSSSSSSE-EECB
T ss_pred cCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-CC---------C--eEEEEEeccCCce-Eecc
Confidence 3578999999988210112344445567888999999999 776642 11 2 3566666 55533 3333
Q ss_pred C--CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC----------ceeEEe-CCcCeeeEEEcCCCCeEEEEccCCC
Q 020756 80 R--KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC----------RPILEL-GSGPYNTVRWNPKGKFLCLAGFGNL 146 (321)
Q Consensus 80 ~--~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~----------~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~ 146 (321)
. |...|.+++|+| ++.|+++ ..++.|.+||++. ..+..+ +...+.++.|+|++ |++++ .
T Consensus 97 ~~~~~~~v~~l~~~~-~~~l~s~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~---~ 168 (342)
T 1yfq_A 97 NNEANLGICRICKYG-DDKLIAA--SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGM---N 168 (342)
T ss_dssp SCCCCSCEEEEEEET-TTEEEEE--ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEE---S
T ss_pred ccCCCCceEEEEeCC-CCEEEEE--cCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEe---C
Confidence 5 889999999999 8888875 6689999999853 233334 67889999999998 77777 7
Q ss_pred CCcEEEEECCC-CeE--EEeeeC--CCeeeEEEcc-CCCEEEEEEcCCceeecCcEEEEeecCc-------ee--EEecc
Q 020756 147 PGDMAFWDYVD-GKQ--LGTTRA--ECSVTSEWSP-DGRYFMTATTAPRLQIDNGIKIFHHNGS-------LF--FKKMF 211 (321)
Q Consensus 147 ~g~i~iwD~~~-~~~--i~~~~~--~~~~~~~wSp-dG~~l~t~~s~~rl~~d~~v~iw~~~g~-------~l--~~~~~ 211 (321)
++.|.+||+++ +.. ...... ..+..++|+| +|++|++++. |+.++||+++.. .+ +..+.
T Consensus 169 d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~------dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI------DGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET------TSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec------CCcEEEEEEcCCCcccccccceeeeccc
Confidence 89999999988 432 122222 3788999999 9999999994 999999999543 22 44443
Q ss_pred C---------ceEEEEEecCCCCCCCC
Q 020756 212 D---------KLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 212 ~---------~~~~~~w~P~~~~~~~~ 229 (321)
. .+..+.|+|+...++..
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred ccccccccceeEEEEEEcCCCCEEEEe
Confidence 3 89999999998877765
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.73 E-value=5.5e-16 Score=147.13 Aligned_cols=184 Identities=10% Similarity=0.196 Sum_probs=130.7
Q ss_pred CCCceEEEEEcCCcCCC-Cc---eeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc--ee
Q 020756 2 GSPASVQIYACGKDLQS-QP---LARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH--EG 75 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~-~~---i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~--~~ 75 (321)
+..+.|+||++...... .. ......+......+.|+|++..+++.+.. ...|++++..... ..
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-----------dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD-----------DQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET-----------TSEEEEEETTCSCSSSC
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC-----------CCeEEEEECCCCCCCcc
Confidence 45789999999872101 11 23333455678899999976666555321 2235566654431 12
Q ss_pred e-eecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC--ceeEEe--CCcCeeeEEEcCCCC-eEEEEccCCCCCc
Q 020756 76 L-VPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC--RPILEL--GSGPYNTVRWNPKGK-FLCLAGFGNLPGD 149 (321)
Q Consensus 76 ~-v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~--~~~~~~--~~~~~~~~~~sPdG~-~l~~~g~~n~~g~ 149 (321)
. ....|...|++++|+|++..++++ |..++.|.+||++. .++..+ |...+.++.|+|+|+ +|++++ .++.
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~t-g~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~---~d~~ 345 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILAT-GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG---TDRR 345 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEE-EETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE---TTSC
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEE-EeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe---CCCc
Confidence 2 222578999999999999854443 56789999999964 455555 788999999999996 467777 7899
Q ss_pred EEEEECCC--------------CeEEEeeeCC--CeeeEEEccCCC-EEEEEEcCCceeecCcEEEEeecCcee
Q 020756 150 MAFWDYVD--------------GKQLGTTRAE--CSVTSEWSPDGR-YFMTATTAPRLQIDNGIKIFHHNGSLF 206 (321)
Q Consensus 150 i~iwD~~~--------------~~~i~~~~~~--~~~~~~wSpdG~-~l~t~~s~~rl~~d~~v~iw~~~g~~l 206 (321)
|.|||+.. .+.+..+..| .+..++|+|+|. +|++++ .|+.|+||++....+
T Consensus 346 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s------~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 346 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS------EDNIMQVWQMAENVY 413 (430)
T ss_dssp CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE------TTSEEEEEEECHHHH
T ss_pred EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE------CCCCEEEeEcccccc
Confidence 99999986 2556666555 689999999999 677777 499999999865443
No 112
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.73 E-value=1.6e-16 Score=144.98 Aligned_cols=165 Identities=13% Similarity=0.291 Sum_probs=125.7
Q ss_pred CCCceEEEEEcCCcCCCCce-eeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecC
Q 020756 2 GSPASVQIYACGKDLQSQPL-ARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLR 80 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i-~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~ 80 (321)
+..+.|+||++... +..+ .....+......+.|+|+|++|++... ...+.+++..... ......
T Consensus 61 ~~dg~i~iw~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------------dg~v~iwd~~~~~-~~~~~~ 125 (368)
T 3mmy_A 61 SWANDVRCWEVQDS--GQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC------------DKTAKMWDLSSNQ-AIQIAQ 125 (368)
T ss_dssp ETTSEEEEEEECTT--SCEEEEEEEECSSCEEEEEECTTSSEEEEEET------------TSEEEEEETTTTE-EEEEEE
T ss_pred CCCCcEEEEEcCCC--CceeEEEeccccCCEEEEEECcCCCEEEEEcC------------CCcEEEEEcCCCC-ceeecc
Confidence 35689999999872 2333 455556788899999999999886521 1236666766653 333446
Q ss_pred CCCCeEEEEE--CcCCCEEEEEEccCCCeEEEEeCCCc-ee---------------------------------------
Q 020756 81 KEGPVHDVQW--SYSGSEFAVVYGFMPASATIFNKKCR-PI--------------------------------------- 118 (321)
Q Consensus 81 ~~~~v~~~~w--sP~g~~l~~~~g~~~~~i~i~d~~~~-~~--------------------------------------- 118 (321)
|.++|.+++| +|+++.|+++ ..++.|.+||++.. .+
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 203 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTG--SWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSE 203 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEE--ETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEE
T ss_pred ccCceEEEEEEeCCCCCEEEEc--cCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccch
Confidence 8899999999 8999888874 56788888886321 00
Q ss_pred ---------------------------------------------------EEe--CCc------------CeeeEEEcC
Q 020756 119 ---------------------------------------------------LEL--GSG------------PYNTVRWNP 133 (321)
Q Consensus 119 ---------------------------------------------------~~~--~~~------------~~~~~~~sP 133 (321)
..+ +.. .+.++.|+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 283 (368)
T 3mmy_A 204 FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP 283 (368)
T ss_dssp EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT
T ss_pred hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec
Confidence 011 111 588999999
Q ss_pred CCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEc
Q 020756 134 KGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 134 dG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s 186 (321)
+|++|++++ .||.|++||+.+++++..+..| .+..++|+|||++|++++.
T Consensus 284 ~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 284 VHGTLATVG---SDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp TTCCEEEEE---TTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred CCCEEEEEc---cCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 999999999 8999999999999999988875 7899999999999999995
No 113
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.72 E-value=8.1e-16 Score=150.46 Aligned_cols=202 Identities=12% Similarity=0.083 Sum_probs=147.8
Q ss_pred CCceEEEEEcCCcC-----CCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee
Q 020756 3 SPASVQIYACGKDL-----QSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV 77 (321)
Q Consensus 3 ~p~~v~v~~~~~~~-----~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v 77 (321)
..+.|+||++.+.. ....+.....+......+.|+|+|++|++... +.+. ...++.++ .+. ....
T Consensus 86 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~-------~~~v~~~d-~~~-~~~~ 155 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE-GRDN-------FGVFISWD-SGN-SLGE 155 (615)
T ss_dssp TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEEC-CSSC-------SEEEEETT-TCC-EEEE
T ss_pred CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEecc-CCCC-------ccEEEEEE-CCC-ccee
Confidence 57899999997510 02445555556778899999999999887632 1111 12355554 222 2222
Q ss_pred ecCCCCCeEEEEECcCCC-EEEEEEccCCCeEEEEeCCC-ceeEEe--CCc---CeeeEEEcCC-CCeEEEEccCCCCCc
Q 020756 78 PLRKEGPVHDVQWSYSGS-EFAVVYGFMPASATIFNKKC-RPILEL--GSG---PYNTVRWNPK-GKFLCLAGFGNLPGD 149 (321)
Q Consensus 78 ~l~~~~~v~~~~wsP~g~-~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~---~~~~~~~sPd-G~~l~~~g~~n~~g~ 149 (321)
...|.+.|.+++|+|+++ .|++ +..++.+.+||+.. ..+..+ |.. .+.++.|+|+ |++|++++ .++.
T Consensus 156 ~~~~~~~v~~~~~~~~~~~~l~~--~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~ 230 (615)
T 1pgu_A 156 VSGHSQRINACHLKQSRPMRSMT--VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG---SDRK 230 (615)
T ss_dssp CCSCSSCEEEEEECSSSSCEEEE--EETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE---TTCC
T ss_pred eecCCccEEEEEECCCCCcEEEE--EeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe---CCCe
Confidence 335889999999999998 5555 46689999999864 455555 566 8999999999 99999998 8999
Q ss_pred EEEEECCCCeEEEee-e---CC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEEe--c----cCceEE
Q 020756 150 MAFWDYVDGKQLGTT-R---AE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFKK--M----FDKLFQ 216 (321)
Q Consensus 150 i~iwD~~~~~~i~~~-~---~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~~--~----~~~~~~ 216 (321)
|++||+.+++.+..+ . .+ .+..++|+ +|++|++++. |+.++|||+. ++.+... + ...+..
T Consensus 231 i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 303 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA------DATIRVWDVTTSKCVQKWTLDKQQLGNQQVG 303 (615)
T ss_dssp EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET------TSEEEEEETTTTEEEEEEECCTTCGGGCEEE
T ss_pred EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcC------CCcEEEEECCCCcEEEEEcCCCCcccCceeE
Confidence 999999999988888 3 44 78899999 9999999994 8999999996 5555332 2 246677
Q ss_pred EEEecCCCCCC
Q 020756 217 AEWKPVSPDKF 227 (321)
Q Consensus 217 ~~w~P~~~~~~ 227 (321)
+.|. +...++
T Consensus 304 ~~~~-~~~~l~ 313 (615)
T 1pgu_A 304 VVAT-GNGRII 313 (615)
T ss_dssp EEEE-ETTEEE
T ss_pred EEeC-CCCeEE
Confidence 7775 444444
No 114
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=2.9e-16 Score=138.51 Aligned_cols=211 Identities=16% Similarity=0.222 Sum_probs=140.2
Q ss_pred CceEEEEEcCCcCCCCceeeeecc-cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFF-RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f-~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
.+.|.+|++... ++........ ......+.|+|+|++|++.... .+ +...||.++..+..... +...
T Consensus 61 ~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~-------~~~~l~~~~~~~~~~~~--~~~~ 128 (297)
T 2ojh_A 61 EGLLYRLSLAGD--PSPEKVDTGFATICNNDHGISPDGALYAISDKV-EF-------GKSAIYLLPSTGGTPRL--MTKN 128 (297)
T ss_dssp TTEEEEEESSSC--CSCEECCCTTCCCBCSCCEECTTSSEEEEEECT-TT-------SSCEEEEEETTCCCCEE--CCSS
T ss_pred CCeEEEEeCCCC--CCceEeccccccccccceEECCCCCEEEEEEeC-CC-------CcceEEEEECCCCceEE--eecC
Confidence 467899998761 1222222222 2445679999999999886421 11 34568888877654333 3444
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeC--CCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC-C
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNK--KCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV-D 157 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~--~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~-~ 157 (321)
..+..++|+|+|+.|++.. ..++.+.||++ .+.....+ +...+..+.|+|+|++|++++. .++.+.||+++ .
T Consensus 129 ~~~~~~~~spdg~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~~~i~~~~~~ 205 (297)
T 2ojh_A 129 LPSYWHGWSPDGKSFTYCG-IRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSS--RTGQMQIWRVRVD 205 (297)
T ss_dssp SSEEEEEECTTSSEEEEEE-EETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEEC--TTSSCEEEEEETT
T ss_pred CCccceEECCCCCEEEEEE-CCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEec--CCCCccEEEECCC
Confidence 5699999999999988653 34677788874 44555555 5677899999999999988762 35777888765 3
Q ss_pred CeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCcee-----ecCcEEEEeecCce---eEE--eccCceEEEEEecCCCC
Q 020756 158 GKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQ-----IDNGIKIFHHNGSL---FFK--KMFDKLFQAEWKPVSPD 225 (321)
Q Consensus 158 ~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~-----~d~~v~iw~~~g~~---l~~--~~~~~~~~~~w~P~~~~ 225 (321)
+..+..+..+ .+..+.|+|||++|++++...... .+..+.+||+.+.. +.. .+...+..+.|+|+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 285 (297)
T 2ojh_A 206 GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDE 285 (297)
T ss_dssp SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSE
T ss_pred CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCE
Confidence 4444445443 567799999999999988411000 12569999996542 222 44567888899999877
Q ss_pred CCCC
Q 020756 226 KFGD 229 (321)
Q Consensus 226 ~~~~ 229 (321)
++..
T Consensus 286 l~~~ 289 (297)
T 2ojh_A 286 FAYV 289 (297)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6643
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.72 E-value=7.2e-16 Score=142.86 Aligned_cols=195 Identities=9% Similarity=0.086 Sum_probs=127.0
Q ss_pred EEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEE
Q 020756 9 IYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDV 88 (321)
Q Consensus 9 v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~ 88 (321)
||.+.. ++++.+...++..+..+.|||+|++|++.. ...+.+++.... ....... ...+..+
T Consensus 3 i~s~~~---~~~~~~~~~h~~~V~~v~fs~dg~~la~g~-------------~~~~~iw~~~~~-~~~~~~~-~~~~~~~ 64 (355)
T 3vu4_A 3 LGSMIT---RNPIVPENHVSNPVTDYEFNQDQSCLILST-------------LKSFEIYNVHPV-AHIMSQE-MRHLSKV 64 (355)
T ss_dssp -------------------CCCCCEEEECTTSSEEEEEC-------------SSEEEEEEETTE-EEEEEEE-CSCCCEE
T ss_pred cccccc---cCCccccccCCCceEEEEECCCCCEEEEEc-------------CCEEEEEecCCc-ceeeeee-cCCeEEE
Confidence 455555 567766677788899999999999887641 011223333332 2222222 2357889
Q ss_pred EECcCCCEEEEEEccCCCeEEEEeCC-CceeEEe-CCcCeeeEEEcCCC-------------------------------
Q 020756 89 QWSYSGSEFAVVYGFMPASATIFNKK-CRPILEL-GSGPYNTVRWNPKG------------------------------- 135 (321)
Q Consensus 89 ~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~-~~~~~~~~~~sPdG------------------------------- 135 (321)
.|.++++.++++ +..++.+.|||.. +..+..+ +...+.++.|+|++
T Consensus 65 ~~~~~~~~~~~~-~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 143 (355)
T 3vu4_A 65 RMLHRTNYVAFV-TGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVC 143 (355)
T ss_dssp EECTTSSEEEEE-CSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEE
T ss_pred EEcCCCCEEEEE-ECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceE
Confidence 999999988776 5567899999985 4555555 56678888888764
Q ss_pred ----CeEEEEccCCCCCcEEEEECCCCe----------------EEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeec
Q 020756 136 ----KFLCLAGFGNLPGDMAFWDYVDGK----------------QLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQID 193 (321)
Q Consensus 136 ----~~l~~~g~~n~~g~i~iwD~~~~~----------------~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d 193 (321)
.++++++ +..+|.|++||+.++. ++..+..| .+++++|||||++|++++. |
T Consensus 144 ~~s~~~la~~s-g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~------d 216 (355)
T 3vu4_A 144 EFSNGLLVYSN-EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ------D 216 (355)
T ss_dssp EEETTEEEEEE-SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET------T
T ss_pred EEEccEEEEeC-CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC------C
Confidence 2333330 2367899999998764 15666666 7899999999999999994 9
Q ss_pred Cc-EEEEeec-CceeEE---e-ccCceEEEEEecCCCCCCCC
Q 020756 194 NG-IKIFHHN-GSLFFK---K-MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 194 ~~-v~iw~~~-g~~l~~---~-~~~~~~~~~w~P~~~~~~~~ 229 (321)
+. ++|||+. |+.+.. + |...++.++|+|++..+++.
T Consensus 217 ~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 217 GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE
T ss_pred CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE
Confidence 98 9999995 666633 2 67799999999999887765
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.72 E-value=9.8e-16 Score=144.12 Aligned_cols=206 Identities=8% Similarity=0.012 Sum_probs=147.7
Q ss_pred CCceEEEEEcCCcCCCCceeeee-----cccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee
Q 020756 3 SPASVQIYACGKDLQSQPLARRS-----FFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV 77 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~-----~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v 77 (321)
..+.|++|++.+ ++.+.... ........+.|+++|+.++.. . ....++.++.........
T Consensus 142 ~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~-~-----------~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 142 EDEGMDVLDINS---GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQ-M-----------QANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp TSSSEEEEETTT---CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEE-G-----------GGTEEEEEETTTCCEEEE
T ss_pred CCCeEEEEECCC---CeEeeecCcccccccCCceeEEEEcCCCEEEEEE-C-----------CCCEEEEEECCCceEEEE
Confidence 356799999987 55554221 223356678999988766543 1 122366777655433222
Q ss_pred ecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe-CCcCeeeEEEcCCCCeEEEEccCC-----CCCcE
Q 020756 78 PLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL-GSGPYNTVRWNPKGKFLCLAGFGN-----LPGDM 150 (321)
Q Consensus 78 ~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n-----~~g~i 150 (321)
...+...+.+++|+|+|+.+++. +..++.|.+||++. ..+..+ ....+..+.|+|+|++|++++.++ .++.|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCS-NWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEE-ETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEE-ecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 22567889999999999988765 45678999999964 445555 455688999999999999987432 36899
Q ss_pred EEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-ceeEE-eccCceEEEEEecCCCCCC
Q 020756 151 AFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-SLFFK-KMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 151 ~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-~~l~~-~~~~~~~~~~w~P~~~~~~ 227 (321)
++||+.+++.+..+... .+..++|+|+|++++.+.+ .++.+++||+.+ +.+.. .+...+..+.|+|+...++
T Consensus 286 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-----~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 286 GIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM-----CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEET-----TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEE
T ss_pred EEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEec-----CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEE
Confidence 99999999877766443 7788999999988776654 489999999964 44432 3456789999999988776
Q ss_pred CC
Q 020756 228 GD 229 (321)
Q Consensus 228 ~~ 229 (321)
..
T Consensus 361 ~~ 362 (433)
T 3bws_A 361 VS 362 (433)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 117
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.71 E-value=3.1e-16 Score=149.88 Aligned_cols=139 Identities=13% Similarity=0.190 Sum_probs=110.1
Q ss_pred cCCCCCeEEEEECcCCCEEEEE--EccCCCeEEEEeCCCc---------e---eEEe--CCcCeeeEEEcCC-CCeEEEE
Q 020756 79 LRKEGPVHDVQWSYSGSEFAVV--YGFMPASATIFNKKCR---------P---ILEL--GSGPYNTVRWNPK-GKFLCLA 141 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~l~~~--~g~~~~~i~i~d~~~~---------~---~~~~--~~~~~~~~~~sPd-G~~l~~~ 141 (321)
+.+.+.|++++|+|+|++|+++ .+..++.|.|||+... + +..+ |...+.++.|+|+ +++|+++
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 3456789999999999999974 3777899999997432 1 2222 5788999999998 7889999
Q ss_pred ccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE--ecc------
Q 020756 142 GFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK--KMF------ 211 (321)
Q Consensus 142 g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~--~~~------ 211 (321)
+ .||.|++||++++..+.....| .+.+++|||||++|++++. |+.++|||..+..... .+.
T Consensus 169 s---~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~------dg~v~iwd~~~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 169 L---ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ------NGTVVQYLPTLQEKKVIPCPPFYESDH 239 (434)
T ss_dssp E---TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET------TSCEEEECTTCCEEEEECCCTTCCTTS
T ss_pred E---CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC------CCcEEEEccCCcccccccCCcccCCCC
Confidence 8 8999999999988766555443 7899999999999999994 9999999998655422 121
Q ss_pred -CceEEEEEecCCCCC
Q 020756 212 -DKLFQAEWKPVSPDK 226 (321)
Q Consensus 212 -~~~~~~~w~P~~~~~ 226 (321)
..+..+.|.++...+
T Consensus 240 ~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 240 PVRVLDVLWIGTYVFA 255 (434)
T ss_dssp CEEEEEEEEEETTEEE
T ss_pred ceeEEEEEEecCceEE
Confidence 278899999976554
No 118
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.7e-16 Score=149.84 Aligned_cols=177 Identities=12% Similarity=0.132 Sum_probs=121.5
Q ss_pred CCCceEEEEEcCCcCCCCcee--------eeeccc----CccceEE--eCCCCCeeEEEEEecccCCCceeecceeEEEE
Q 020756 2 GSPASVQIYACGKDLQSQPLA--------RRSFFR----CSTVQLN--WNRGSTGLLAVAQSDVDKTNQSYYGESKLNYL 67 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~--------~~~~f~----~~~~~~~--Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l 67 (321)
+..+.|+||++.....++.+. ...+.. .....+. |+++|..|++.. ....|.++
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~d~~i~iw 197 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT------------NLSRVIIF 197 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE------------TTSEEEEE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe------------CCCeEEEE
Confidence 357899999995210033322 222211 1122222 566777666542 11236666
Q ss_pred EcCCCcee-eeecC-CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe---CCcCeeeEEEc----CCCCe
Q 020756 68 TTDGTHEG-LVPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL---GSGPYNTVRWN----PKGKF 137 (321)
Q Consensus 68 ~~~g~~~~-~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~---~~~~~~~~~~s----PdG~~ 137 (321)
+....... .+... |.+.|.+++|+|+++.|++. ..++.|.+||++. ..+..+ +...+.++.|+ |+|++
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 198 DIRTLERLQIIENSPRHGAVSSICIDEECCVLILG--TTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp ETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEE--ETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred eCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEE--cCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE
Confidence 66544222 22222 67899999999999999884 6789999999964 455554 56688999665 56889
Q ss_pred EEEEccCCCCCcEEEEECCCCeEEEeeeCC----------------------------CeeeEEEccCCCEEEEEEcCCc
Q 020756 138 LCLAGFGNLPGDMAFWDYVDGKQLGTTRAE----------------------------CSVTSEWSPDGRYFMTATTAPR 189 (321)
Q Consensus 138 l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~----------------------------~~~~~~wSpdG~~l~t~~s~~r 189 (321)
|++++ .|+.|++||+.+++++..+..+ .+++++|+ +|++|++++.
T Consensus 276 l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~--- 348 (437)
T 3gre_A 276 VVGGS---SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEA--- 348 (437)
T ss_dssp EEEES---TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGG---
T ss_pred EEEEc---CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCC---
Confidence 99998 8999999999999888777633 26678999 8899999984
Q ss_pred eeecCcEEEEeec
Q 020756 190 LQIDNGIKIFHHN 202 (321)
Q Consensus 190 l~~d~~v~iw~~~ 202 (321)
|+.|+|||+.
T Consensus 349 ---d~~i~~wd~~ 358 (437)
T 3gre_A 349 ---TSSIVMFSLN 358 (437)
T ss_dssp ---GTEEEEEETT
T ss_pred ---CCeEEEEECC
Confidence 9999999984
No 119
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.71 E-value=5.2e-16 Score=146.53 Aligned_cols=182 Identities=11% Similarity=0.012 Sum_probs=133.6
Q ss_pred CCceeee-ecccCccceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCC---C--ceeeeecCCCCCeEEEEE
Q 020756 18 SQPLARR-SFFRCSTVQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDG---T--HEGLVPLRKEGPVHDVQW 90 (321)
Q Consensus 18 ~~~i~~~-~~f~~~~~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g---~--~~~~v~l~~~~~v~~~~w 90 (321)
++.+... ..+...+..+.|+| +|++|+... .| |. |.+++... . ......+.|.++|.+++|
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s-~d---------g~--v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 119 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGS-DQ---------GV--IKIWNLKEIIVGEVYSSSLTYDCSSTVTQITM 119 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEE-TT---------SE--EEEEEHHHHHTTCCCSCSEEEECSSCEEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEec-CC---------ce--EEEeECcccccCcccceeeeccCCCCEEEEEE
Confidence 4555555 44567888999999 999887642 11 33 44444322 1 223444468999999999
Q ss_pred CcCCCEEEEEEccCCCeEEEEeCC----CceeEEe--------------CCcCeeeEE--EcCCCCeEEEEccCCCCCcE
Q 020756 91 SYSGSEFAVVYGFMPASATIFNKK----CRPILEL--------------GSGPYNTVR--WNPKGKFLCLAGFGNLPGDM 150 (321)
Q Consensus 91 sP~g~~l~~~~g~~~~~i~i~d~~----~~~~~~~--------------~~~~~~~~~--~sPdG~~l~~~g~~n~~g~i 150 (321)
+|+++.|+++ ..|+.|.+||+. +..+..+ +...+.++. ++|++++|++++ .++.|
T Consensus 120 ~~~~~~l~s~--s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i 194 (437)
T 3gre_A 120 IPNFDAFAVS--SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT---NLSRV 194 (437)
T ss_dssp CTTSSEEEEE--ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE---TTSEE
T ss_pred eCCCCEEEEE--eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe---CCCeE
Confidence 9999999885 678999999983 3222221 223445555 668999999999 89999
Q ss_pred EEEECCCCeEEEeeeC--C--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEE---eccCceEEEEEecC
Q 020756 151 AFWDYVDGKQLGTTRA--E--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFK---KMFDKLFQAEWKPV 222 (321)
Q Consensus 151 ~iwD~~~~~~i~~~~~--~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~---~~~~~~~~~~w~P~ 222 (321)
++||+++++++..+.. | .+++++|+|+|++|++++. |+.++|||+. ++.+.. .+...+..+.|+|.
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 195 IIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT------RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp EEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET------TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred EEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC------CCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 9999999999888876 3 7899999999999999994 9999999995 444433 34457999988875
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.71 E-value=1.4e-15 Score=140.12 Aligned_cols=177 Identities=14% Similarity=0.135 Sum_probs=119.6
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCC---CCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-eee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNR---GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE-GLV 77 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp---~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~-~~v 77 (321)
|..+.|++|.+... ++.+.....+......+.|++ +|+.|+.. + ....+.+++...+.. ..+
T Consensus 154 g~d~~V~~~~~s~d--G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSg-S-----------~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 154 LSDQQVEVMTFAED--GGGKENQFLMPPEETILTFAEVQGMQEALLGT-T-----------IMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp STTCEEEEEEECTT--SCEEEEEEECCCSSCEEEEEEEETSTTEEEEE-E-----------TTSEEEEEETTTCCEEEEE
T ss_pred CCCCcEEEEEECCC--CceeeeeccCCCceeeEEeeccCCCCceEEEe-c-----------CCCcEEEEECCCCcEEEEE
Confidence 45788889998331 667777778888888888888 44555442 1 122356666654422 222
Q ss_pred ecCC--CCCeEEEEECcCCCEEEE----------EEccCCCeEEEEeCCCce-eEEe----CCcC-eeeEEEcCCCCeEE
Q 020756 78 PLRK--EGPVHDVQWSYSGSEFAV----------VYGFMPASATIFNKKCRP-ILEL----GSGP-YNTVRWNPKGKFLC 139 (321)
Q Consensus 78 ~l~~--~~~v~~~~wsP~g~~l~~----------~~g~~~~~i~i~d~~~~~-~~~~----~~~~-~~~~~~sPdG~~l~ 139 (321)
.-++ ...+..++|+|+|..+++ +.|..|+++++||.++.. +..+ ..+. ...+..+.+|.+++
T Consensus 220 ~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lA 299 (356)
T 2w18_A 220 HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAA 299 (356)
T ss_dssp ECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEE
T ss_pred cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEE
Confidence 2121 346778899999998864 446778899999986543 3222 1121 11223333377888
Q ss_pred EEccCCCCCcEEEEECCCCeEEEeeeCC--Cee-eEEEccCCCEEEEEEcCCceeecCcEEEEee
Q 020756 140 LAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSV-TSEWSPDGRYFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 140 ~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~-~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
+++ .|++|+|||+.+++++.++.+| .+. .++|||||++|++++. |++|+|||+
T Consensus 300 SgS---~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~------D~TIklWd~ 355 (356)
T 2w18_A 300 AIL---TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK------DGNIFVYHY 355 (356)
T ss_dssp EEE---TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT------TSCEEEEEE
T ss_pred EEc---CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC------CCcEEEecC
Confidence 888 8999999999999999999866 344 4899999999999994 999999996
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.71 E-value=4.6e-15 Score=133.02 Aligned_cols=163 Identities=18% Similarity=0.239 Sum_probs=120.8
Q ss_pred eeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc----eeeeecCCCCCeEEEEECcCCCE
Q 020756 21 LARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH----EGLVPLRKEGPVHDVQWSYSGSE 96 (321)
Q Consensus 21 i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~----~~~v~l~~~~~v~~~~wsP~g~~ 96 (321)
+.....+......+.|+++|++|+... . | |. +.+++..... .......+.+.|..+.|+|++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~l~s~~-~--d-------~~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 210 (318)
T 4ggc_A 143 VATLSGHSQEVCGLRWAPDGRHLASGG-N--D-------NL--VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN 210 (318)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEE-T--T-------SC--EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT
T ss_pred EEEEcCccCceEEEEEcCCCCEEEEEe-c--C-------cc--eeEEECCCCcccccceeeecccCCceEEEEecCCCCc
Confidence 334444456667778888888776542 1 1 22 4444443221 11223346789999999998775
Q ss_pred EE-EEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--Ceee
Q 020756 97 FA-VVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVT 171 (321)
Q Consensus 97 l~-~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~ 171 (321)
++ +..+..++.+.+||......... +...+..+.|+|+++.+++++ +..++.|+|||+.+++++..+.+| .+++
T Consensus 211 ~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s-g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 211 VLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH-GFAQNQLVIWKYPTMAKVAELKGHTSRVLS 289 (318)
T ss_dssp EEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEE-CTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEE-EcCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 54 45577888999999965544333 678899999999999988764 235799999999999999999887 7899
Q ss_pred EEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 172 SEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 172 ~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
++|||||++|++++. |+.|+|||+.
T Consensus 290 l~~spdg~~l~S~s~------D~~v~iWd~~ 314 (318)
T 4ggc_A 290 LTMSPDGATVASAAA------DETLRLWRCF 314 (318)
T ss_dssp EEECTTSSCEEEEET------TTEEEEECCS
T ss_pred EEEcCCCCEEEEEec------CCeEEEEECC
Confidence 999999999999994 9999999974
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.69 E-value=3.7e-16 Score=146.76 Aligned_cols=202 Identities=13% Similarity=0.094 Sum_probs=129.2
Q ss_pred CCceEEEEEcCCcCCCCceee-----eecccCccceEEeCC--------CCCeeEEEEEecccCCCceeecceeEEEEEc
Q 020756 3 SPASVQIYACGKDLQSQPLAR-----RSFFRCSTVQLNWNR--------GSTGLLAVAQSDVDKTNQSYYGESKLNYLTT 69 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~-----~~~f~~~~~~~~Wsp--------~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~ 69 (321)
.++.|+||++.. ++.... ..-+...+..+.|+| +|+.|+.. +.| +. +.++++
T Consensus 109 ~d~~v~lw~~~~---~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~-s~D---------~t--v~~Wd~ 173 (393)
T 4gq1_A 109 QDNTVRLIITKN---ETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASV-GDD---------CT--LIIWRL 173 (393)
T ss_dssp TTSCEEEEEEET---TEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE-ETT---------SE--EEEEEE
T ss_pred CCCcEEEEECCC---CccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEE-ECC---------Ce--EEEEEC
Confidence 467899999987 443332 333567788999998 67766654 211 22 444454
Q ss_pred CCCceeeeecCCCCCeEEEEECcCCC-EEEEEEccCCCeEEEEeCCCcee-E---------------------------E
Q 020756 70 DGTHEGLVPLRKEGPVHDVQWSYSGS-EFAVVYGFMPASATIFNKKCRPI-L---------------------------E 120 (321)
Q Consensus 70 ~g~~~~~v~l~~~~~v~~~~wsP~g~-~l~~~~g~~~~~i~i~d~~~~~~-~---------------------------~ 120 (321)
...........|..+|.+++|+|++. +|++ +..|+.|++||++.... . .
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~--~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIV--GERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEE--EETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEe--cCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 43334444556889999999999986 4555 57789999999853211 0 0
Q ss_pred eCCcCeeeEEEc-CCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--------------------CeeeEEEcc-CC
Q 020756 121 LGSGPYNTVRWN-PKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--------------------CSVTSEWSP-DG 178 (321)
Q Consensus 121 ~~~~~~~~~~~s-PdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--------------------~~~~~~wSp-dG 178 (321)
-+...+.++.|+ |||+.|++++ .++.+.+||+..++....+..+ ....+.|+| .+
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s~s---~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILAMC---KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYM 328 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEEEC---TTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCT
T ss_pred cccccceeeeeecCCCCEEEEEe---CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCC
Confidence 134566778876 8999999998 8999999999876544433222 112234444 34
Q ss_pred CEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCCCCCC
Q 020756 179 RYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 179 ~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
++++++++ .|+.|+|||+. |+.+ ...+...|.+++|+|++..+...
T Consensus 329 ~~~~~sgs-----~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 329 DYFATAHS-----QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp TEEEEEET-----TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEEC-----CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 44444444 49999999985 4443 44566789999999999877654
No 123
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=6.7e-16 Score=155.11 Aligned_cols=214 Identities=7% Similarity=0.021 Sum_probs=138.5
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccC---ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRC---STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL 79 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~---~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l 79 (321)
..+.|++|++.+ ++.......... ....+.|||||++|++... +.....+.....++++++.+.....+..
T Consensus 35 ~dg~i~~~d~~~---g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~---~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 108 (723)
T 1xfd_A 35 QKGTVRLWNVET---NTSTVLIEGKKIESLRAIRYEISPDREYALFSYN---VEPIYQHSYTGYYVLSKIPHGDPQSLDP 108 (723)
T ss_dssp SSSCEEEBCGGG---CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEES---CCCCSSSCCCSEEEEEESSSCCCEECCC
T ss_pred CCCCEEEEECCC---CcEEEEeccccccccccceEEECCCCCEEEEEec---CccceeecceeeEEEEECCCCceEeccC
Confidence 457899999988 554433332222 3678999999999988642 1111111122457888887654333332
Q ss_pred C--CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCe------------------eeEEEcCCCC
Q 020756 80 R--KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPY------------------NTVRWNPKGK 136 (321)
Q Consensus 80 ~--~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~------------------~~~~~sPdG~ 136 (321)
. +...+..++|||||+.|+++.. +.|.+||+.+.....+ +...+ ..+.|||||+
T Consensus 109 ~~~~~~~~~~~~~SPdG~~la~~~~---~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~ 185 (723)
T 1xfd_A 109 PEVSNAKLQYAGWGPKGQQLIFIFE---NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT 185 (723)
T ss_dssp TTCCSCCCSBCCBCSSTTCEEEEET---TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS
T ss_pred CccccccccccEECCCCCEEEEEEC---CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC
Confidence 1 2334889999999999999743 5899999965433332 23222 6899999999
Q ss_pred eEEEEccCC-------------------------------CCCcEEEEECCCCeEEEeeeC--------CCeeeEEEccC
Q 020756 137 FLCLAGFGN-------------------------------LPGDMAFWDYVDGKQLGTTRA--------ECSVTSEWSPD 177 (321)
Q Consensus 137 ~l~~~g~~n-------------------------------~~g~i~iwD~~~~~~i~~~~~--------~~~~~~~wSpd 177 (321)
+|++++... .+..|++||+.+++....+.. ..+..+.||||
T Consensus 186 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD 265 (723)
T 1xfd_A 186 RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS 265 (723)
T ss_dssp EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS
T ss_pred EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC
Confidence 999986321 123899999998875444432 24677999999
Q ss_pred CCEEEEEEcCCceeecCcEEEEeecC-cee--EEec-cCce----EEEEEecCCCCCC
Q 020756 178 GRYFMTATTAPRLQIDNGIKIFHHNG-SLF--FKKM-FDKL----FQAEWKPVSPDKF 227 (321)
Q Consensus 178 G~~l~t~~s~~rl~~d~~v~iw~~~g-~~l--~~~~-~~~~----~~~~w~P~~~~~~ 227 (321)
|++|++..... ..+..+++||+.+ +.. ...+ ...+ ..+.|+|++..++
T Consensus 266 g~~l~~~~~~~--~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 266 TKVAVTWLNRA--QNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp SEEEEEEEETT--SCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEE
T ss_pred CeEEEEEEcCC--CCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEE
Confidence 99987776421 1245789999854 433 2222 2222 3789999998766
No 124
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.68 E-value=6.6e-15 Score=139.98 Aligned_cols=199 Identities=12% Similarity=0.072 Sum_probs=147.0
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeC--CCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-----
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWN--RGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE----- 74 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Ws--p~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~----- 74 (321)
+..+.|+||++.+ ++.+.....+......+.|+ +++.+++... .| |. +.+++......
T Consensus 180 s~dg~i~vwd~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s-~d---------~~--i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 180 STDRTVRVWDIKK---GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS-RD---------NT--LHVWKLPKESSVPDHG 244 (464)
T ss_dssp ETTSCEEEEETTT---TEEEEEECCCSSCEEEEEEEESSSCEEEEEEE-TT---------SC--EEEEECCCCCCC----
T ss_pred eCCCCEEEEECCC---CcEEEEECCCCCccEEEEEecCCCCCEEEEEc-CC---------Cc--EEEeeCCCCccccccc
Confidence 4578999999998 67777766677777788888 4666665542 11 22 33444333211
Q ss_pred ------------------eeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcC
Q 020756 75 ------------------GLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNP 133 (321)
Q Consensus 75 ------------------~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sP 133 (321)
......|...|.++ +++++.|++. ..++.|.+||+.. ..+..+ |...+.++.|+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~--~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSG--SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH 320 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEE--ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred ccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEE--eCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC
Confidence 11223466777766 6788888884 6688999999954 455666 678899999999
Q ss_pred CCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-ceeEEe-
Q 020756 134 KGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-SLFFKK- 209 (321)
Q Consensus 134 dG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-~~l~~~- 209 (321)
+|++|++++ .++.|++||+.+++++..+..| .+..+.|+ +.+|++++. |+.+++||+.. ......
T Consensus 321 ~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~------dg~v~vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 321 ERKRCISAS---MDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAA------DGSIRGWDANDYSRKFSYH 389 (464)
T ss_dssp TTTEEEEEE---TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEET------TSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEe---CCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeC------CCcEEEEECCCCceeeeec
Confidence 999999999 8999999999999999998876 67778887 689999994 99999999954 444443
Q ss_pred ccCceEEEEEecCCCCCCCCc
Q 020756 210 MFDKLFQAEWKPVSPDKFGDI 230 (321)
Q Consensus 210 ~~~~~~~~~w~P~~~~~~~~~ 230 (321)
+...+..+.|+|++..++...
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 390 HTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp CTTCCCEEEEEECSSEEEEEE
T ss_pred CCCCccEEEEEeCCCEEEEec
Confidence 445677789999987776653
No 125
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=9.2e-15 Score=132.49 Aligned_cols=201 Identities=9% Similarity=-0.007 Sum_probs=139.2
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-eeeecCCC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE-GLVPLRKE 82 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~-~~v~l~~~ 82 (321)
.+.|.+|++.+ ++.+....+..... .+.|+|+|++|++... +...|+.++...... ......+.
T Consensus 19 ~~~v~~~d~~~---~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~-----------~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 19 LRRISFFSTDT---LEILNQITLGYDFV-DTAITSDCSNVVVTSD-----------FCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp GTEEEEEETTT---CCEEEEEECCCCEE-EEEECSSSCEEEEEES-----------TTCEEEEEECSSSSCEEEEEEECS
T ss_pred CCeEEEEeCcc---cceeeeEEccCCcc-eEEEcCCCCEEEEEeC-----------CCCeEEEEECCCCceeEEecccCC
Confidence 56899999988 66666666544445 9999999998877532 223578888765532 22222245
Q ss_pred CCeEEEEECcCCCEEEEEEccCC-C--eEEEEeCCCc-eeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCc-EEEEECC
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMP-A--SATIFNKKCR-PILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGD-MAFWDYV 156 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~-~--~i~i~d~~~~-~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~-i~iwD~~ 156 (321)
.++.+++|+|+|+++++ .... + .|.+||+... .+..+ .......+.|+|||++|++++. .++. |.+||+.
T Consensus 84 ~~~~~~~~s~dg~~l~~--~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~--~~~~~i~~~~~~ 159 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVT--VTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDR--SSANTVRRFKID 159 (331)
T ss_dssp SCCCCEEECTTSSEEEE--CCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEE--TTTTEEEEEEEC
T ss_pred CCccceEECCCCCEEEE--ecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEec--CCCceEEEEEEC
Confidence 56655999999999984 3333 3 8999999654 44444 3455689999999998877752 3467 9999987
Q ss_pred CCeEE-----Eeee-CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Cce---eEEe-ccCceEEEEEecCCCC
Q 020756 157 DGKQL-----GTTR-AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSL---FFKK-MFDKLFQAEWKPVSPD 225 (321)
Q Consensus 157 ~~~~i-----~~~~-~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~---l~~~-~~~~~~~~~w~P~~~~ 225 (321)
....+ ..+. ......++|+|||++|+++.. .++.+.+||+. ++. +... ....+..+.|+|++..
T Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-----~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 160 ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL-----IGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGST 234 (331)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET-----TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSE
T ss_pred CCCcEeecCCccccCCCCccceEECCCCCEEEEEeC-----CCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCE
Confidence 53222 1122 236778999999998877774 37889999994 555 4332 3346778999999986
Q ss_pred CCC
Q 020756 226 KFG 228 (321)
Q Consensus 226 ~~~ 228 (321)
++-
T Consensus 235 l~v 237 (331)
T 3u4y_A 235 VYV 237 (331)
T ss_dssp EEE
T ss_pred EEE
Confidence 663
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.67 E-value=1.5e-15 Score=154.64 Aligned_cols=184 Identities=20% Similarity=0.263 Sum_probs=135.7
Q ss_pred ecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcC--CCEEEEEEc
Q 020756 25 SFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYS--GSEFAVVYG 102 (321)
Q Consensus 25 ~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~--g~~l~~~~g 102 (321)
..+...+..+.|+|+|++|++... .|...+|.+.............|.++|.+++|+|+ |+.|+++
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~----------dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~-- 73 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSS----------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC-- 73 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEET----------TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEE--
T ss_pred ccCcceeEEEEECCCCCeEEEEEC----------CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEE--
Confidence 345677889999999998876521 13334454432122122223358899999999998 8888885
Q ss_pred cCCCeEEEEeCCCc---eeEEe--CCcCeeeEEEcCC--CCeEEEEccCCCCCcEEEEECCCCe--EEEeeeCC--Ceee
Q 020756 103 FMPASATIFNKKCR---PILEL--GSGPYNTVRWNPK--GKFLCLAGFGNLPGDMAFWDYVDGK--QLGTTRAE--CSVT 171 (321)
Q Consensus 103 ~~~~~i~i~d~~~~---~~~~~--~~~~~~~~~~sPd--G~~l~~~g~~n~~g~i~iwD~~~~~--~i~~~~~~--~~~~ 171 (321)
..|+.|.+||+... .+..+ |...+.++.|+|+ |++|++++ .+|.|++||+.++. ....+..+ .+..
T Consensus 74 s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs---~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~ 150 (753)
T 3jro_A 74 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (753)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE---TTSEEEEEECCSSSCCCCEEEECCSSCEEE
T ss_pred eCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe---CCCcEEEEEeecCCCcceeEeecCCCceEE
Confidence 66899999999655 34444 7889999999999 99999999 89999999998762 22333333 7899
Q ss_pred EEEcc-------------CCCEEEEEEcCCceeecCcEEEEeecCc-----ee--EEeccCceEEEEEecC---CCCCCC
Q 020756 172 SEWSP-------------DGRYFMTATTAPRLQIDNGIKIFHHNGS-----LF--FKKMFDKLFQAEWKPV---SPDKFG 228 (321)
Q Consensus 172 ~~wSp-------------dG~~l~t~~s~~rl~~d~~v~iw~~~g~-----~l--~~~~~~~~~~~~w~P~---~~~~~~ 228 (321)
+.|+| ||.+|++++. |+.|+|||+... .+ ...|...+..+.|+|+ +..+++
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~------dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGA------DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEET------TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred EEecCcccccccccccCCCCCEEEEEEC------CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 99999 6999999995 999999999542 22 3456788999999999 565655
Q ss_pred C
Q 020756 229 D 229 (321)
Q Consensus 229 ~ 229 (321)
.
T Consensus 225 ~ 225 (753)
T 3jro_A 225 V 225 (753)
T ss_dssp E
T ss_pred E
Confidence 4
No 127
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.67 E-value=2.5e-15 Score=155.95 Aligned_cols=177 Identities=11% Similarity=0.149 Sum_probs=133.6
Q ss_pred ccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCC
Q 020756 27 FRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPA 106 (321)
Q Consensus 27 f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~ 106 (321)
+...+..+.|+|+|++|++.. .| | .+++++..+. +....+.|..+|.+++|+| |++|+++ ..|+
T Consensus 16 h~~~V~~lafspdg~~lAsgs-~D---------g--~I~lw~~~~~-~~~~~~~~~~~V~~l~fsp-g~~L~S~--s~D~ 79 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIAT-VT---------G--EVHIYGQQQV-EVVIKLEDRSAIKEMRFVK-GIYLVVI--NAKD 79 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEE-TT---------S--EEEEECSTTC-EEEEECSSCCCEEEEEEET-TTEEEEE--ETTC
T ss_pred CCCCcEEEEECCCCCEEEEEe-CC---------C--EEEEEeCCCc-EEEEEcCCCCCEEEEEEcC-CCEEEEE--ECcC
Confidence 456788999999999887752 11 2 2555565554 4445566788999999999 8877774 6689
Q ss_pred eEEEEeCCC-ceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEE-----------eeeCC--Ceee
Q 020756 107 SATIFNKKC-RPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLG-----------TTRAE--CSVT 171 (321)
Q Consensus 107 ~i~i~d~~~-~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~-----------~~~~~--~~~~ 171 (321)
.|+|||+.. +.+..+ +...+.++.|+|+|++|++++ .+|.|++||++++++.. .+..| .+.+
T Consensus 80 ~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs---~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~s 156 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGL---QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVS 156 (902)
T ss_dssp EEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEE---TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCE
T ss_pred eEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEc---CCCcEEEEECCCCccccceeccccccccccccCCCCeEE
Confidence 999999954 455555 677899999999999999998 89999999999887641 12233 7889
Q ss_pred EEEccC-CCEEEEEEcCCceeecCcEEEEeecCce-e--EEec------------------cCceEEEEEecCCCCCCCC
Q 020756 172 SEWSPD-GRYFMTATTAPRLQIDNGIKIFHHNGSL-F--FKKM------------------FDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 172 ~~wSpd-G~~l~t~~s~~rl~~d~~v~iw~~~g~~-l--~~~~------------------~~~~~~~~w~P~~~~~~~~ 229 (321)
++|+|+ +..|++++. |+.+ |||+.... + +..+ ...|..++|+|++..+++.
T Consensus 157 l~~sp~~~~~l~~g~~------dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 157 IQWNPRDIGTVLISYE------YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp EEEETTEEEEEEEECS------SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred EEEccCCCCEEEEEeC------CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 999996 567777773 8889 99996543 3 2222 3569999999998877755
No 128
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.67 E-value=1.4e-15 Score=153.29 Aligned_cols=185 Identities=15% Similarity=0.187 Sum_probs=129.2
Q ss_pred CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC------------------------CC
Q 020756 29 CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE------------------------GP 84 (321)
Q Consensus 29 ~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~------------------------~~ 84 (321)
.....+.|||||++|++....+ +.. +...|++++..++....+...+. ..
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d----~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKD----SDR--NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCS----SCT--TEEEEEEEETTTCCEEEEECGGGTC--------------------CCEE
T ss_pred CCCCCceEecCCCEEEEEeccC----CCC--cccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccC
Confidence 3466899999999998864211 110 12358888887664443332222 23
Q ss_pred eEEEEECcCCCEEEEEEccCCCeEEEEeCCCc---eeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe
Q 020756 85 VHDVQWSYSGSEFAVVYGFMPASATIFNKKCR---PILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK 159 (321)
Q Consensus 85 v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~---~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~ 159 (321)
|.+++|||||++|++... +.|.+||+.+. .+..+ +...+..+.|||||++|++++ +++|++||+.+++
T Consensus 111 v~~~~~SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~----~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG---GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR----GRNLWVIDLASGR 183 (741)
T ss_dssp SCCCEECTTSSEEEEEET---TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE----TTEEEEEETTTTE
T ss_pred cceeEECCCCCEEEEEeC---CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe----CCcEEEEecCCCC
Confidence 789999999999999743 79999999766 55555 557789999999999999986 3589999999887
Q ss_pred EEEeeeCCC------------------eeeEEEccCCCEEEEEEcCCc-------------------ee--------ecC
Q 020756 160 QLGTTRAEC------------------SVTSEWSPDGRYFMTATTAPR-------------------LQ--------IDN 194 (321)
Q Consensus 160 ~i~~~~~~~------------------~~~~~wSpdG~~l~t~~s~~r-------------------l~--------~d~ 194 (321)
.......+. +..+.|||||++|++++.... ++ ...
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 665544331 367999999999999874100 00 001
Q ss_pred cEEEEeecC-ceeEE-----eccCceEEEEEecCCCCCC
Q 020756 195 GIKIFHHNG-SLFFK-----KMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 195 ~v~iw~~~g-~~l~~-----~~~~~~~~~~w~P~~~~~~ 227 (321)
.+.+||+.+ ..+.. .+...+..+.| |++..++
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~ 301 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLS 301 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEE
Confidence 688888865 43322 23456889999 9988776
No 129
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.66 E-value=3.2e-15 Score=150.00 Aligned_cols=200 Identities=13% Similarity=0.095 Sum_probs=134.8
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCC-----Cceeeeec
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDG-----THEGLVPL 79 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g-----~~~~~v~l 79 (321)
+.|.||++.+ ++. ............+.|||||++|++.. ...|+++++.+ +....+..
T Consensus 101 ~~i~~~d~~~---~~~-~~l~~~~~~~~~~~~SpdG~~la~~~-------------~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 101 GGLVGFDMLA---RKV-TYLFDTNEETASLDFSPVGDRVAYVR-------------NHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TEEEEEETTT---TEE-EEEECCTTCCTTCEECTTSSEEEEEE-------------TTEEEEEECBCTTSCCCCCEESCS
T ss_pred CEEEEEECCC---Cce-EEccCCcccccCCcCCCCCCEEEEEE-------------CCeEEEEecCcccccCCCcEEecc
Confidence 6789999977 433 33333455677899999999998851 12478888765 44444433
Q ss_pred CCCCC--------------eEEEEECcCCCEEEEEEc-------------------------------cCCCeEEEEeCC
Q 020756 80 RKEGP--------------VHDVQWSYSGSEFAVVYG-------------------------------FMPASATIFNKK 114 (321)
Q Consensus 80 ~~~~~--------------v~~~~wsP~g~~l~~~~g-------------------------------~~~~~i~i~d~~ 114 (321)
..... +.++.|||||++|+++.- ..+..|.+||+.
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 33332 489999999999998741 123479999997
Q ss_pred CceeEEe-----CCcCeeeEEEcCCCCeEEEEccCC--CCCcEEEEECCCC-eEEEeee--CC----CeeeEEEcc--CC
Q 020756 115 CRPILEL-----GSGPYNTVRWNPKGKFLCLAGFGN--LPGDMAFWDYVDG-KQLGTTR--AE----CSVTSEWSP--DG 178 (321)
Q Consensus 115 ~~~~~~~-----~~~~~~~~~~sPdG~~l~~~g~~n--~~g~i~iwD~~~~-~~i~~~~--~~----~~~~~~wSp--dG 178 (321)
+.....+ +...+..+.|||||++|++++... ....|++||+.++ ....... .. .+..+.||| ||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 244 TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSS
T ss_pred CCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCC
Confidence 6654443 234578999999999999876211 1248999999998 4332221 11 135689999 99
Q ss_pred CEEEEEEcCCceeecCcEEEEee--cCceeEE--eccCceEE-EEEecCCCCCC
Q 020756 179 RYFMTATTAPRLQIDNGIKIFHH--NGSLFFK--KMFDKLFQ-AEWKPVSPDKF 227 (321)
Q Consensus 179 ~~l~t~~s~~rl~~d~~v~iw~~--~g~~l~~--~~~~~~~~-~~w~P~~~~~~ 227 (321)
++|+++. .++.++||.+ +|..+.. .+...+.. +.|+|++..++
T Consensus 324 ~~l~~~~------~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~ 371 (706)
T 2z3z_A 324 QFIWQSR------RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLY 371 (706)
T ss_dssp EEEEEEC------TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEE
T ss_pred EEEEEEc------cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEE
Confidence 9887776 3777888877 4555433 23345655 79999987665
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.66 E-value=4.9e-14 Score=128.30 Aligned_cols=202 Identities=9% Similarity=0.015 Sum_probs=146.6
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eeeeecCCC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGLVPLRKE 82 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~v~l~~~ 82 (321)
.+.|.+|+..+ ++.+...... .....+.|+++|+++++... +...|+.++..... ...+.+...
T Consensus 68 ~~~v~~~d~~~---~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~-----------~~~~v~~~d~~~~~~~~~~~~~~~ 132 (353)
T 3vgz_A 68 GGVVYRLDPVT---LEVTQAIHND-LKPFGATINNTTQTLWFGNT-----------VNSAVTAIDAKTGEVKGRLVLDDR 132 (353)
T ss_dssp SEEEEEECTTT---CCEEEEEEES-SCCCSEEEETTTTEEEEEET-----------TTTEEEEEETTTCCEEEEEESCCC
T ss_pred CccEEEEcCCC---CeEEEEEecC-CCcceEEECCCCCEEEEEec-----------CCCEEEEEeCCCCeeEEEEecCCC
Confidence 56899999887 5666555543 34678999999998877531 12247777775442 234444322
Q ss_pred C--------CeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEeC--CcCeeeEEEcCCCCeEEEEccCCCCCcEE
Q 020756 83 G--------PVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILELG--SGPYNTVRWNPKGKFLCLAGFGNLPGDMA 151 (321)
Q Consensus 83 ~--------~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~~--~~~~~~~~~sPdG~~l~~~g~~n~~g~i~ 151 (321)
. .++++.|+|+|+++++.....++.|.+||.... .+..+. ......+.|+|+|++|++++ .++.|.
T Consensus 133 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---~~~~i~ 209 (353)
T 3vgz_A 133 KRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTN---ADGELI 209 (353)
T ss_dssp CCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEEC---TTSEEE
T ss_pred ccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEc---CCCeEE
Confidence 1 268899999999988875345778999999654 445553 34478899999999999987 678999
Q ss_pred EEECCCCeEEEeeeC------CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEeccCceEEEEEecCCC
Q 020756 152 FWDYVDGKQLGTTRA------ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKKMFDKLFQAEWKPVSP 224 (321)
Q Consensus 152 iwD~~~~~~i~~~~~------~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~~~~~~~~~~w~P~~~ 224 (321)
+||+.+++.+..+.. +.+..++|+|||++|+++.. .++.+.+||. +++.+.......-..+.|+|+..
T Consensus 210 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~ 284 (353)
T 3vgz_A 210 TIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-----KAAEVLVVDTRNGNILAKVAAPESLAVLFNPARN 284 (353)
T ss_dssp EEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-----SSSEEEEEETTTCCEEEEEECSSCCCEEEETTTT
T ss_pred EEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-----CCCEEEEEECCCCcEEEEEEcCCCceEEECCCCC
Confidence 999999988776653 14567999999999888774 3689999999 45655444444456789999988
Q ss_pred CCCC
Q 020756 225 DKFG 228 (321)
Q Consensus 225 ~~~~ 228 (321)
.+|-
T Consensus 285 ~l~v 288 (353)
T 3vgz_A 285 EAYV 288 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=7.2e-14 Score=127.20 Aligned_cols=203 Identities=6% Similarity=-0.023 Sum_probs=146.5
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCc---------cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCS---------TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE 74 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~---------~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~ 74 (321)
.+.|.+|++.+ ++.+......... ...+.|+|+|+.+++.... ....|+.++.....
T Consensus 110 ~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------~~~~i~~~d~~~~~- 175 (353)
T 3vgz_A 110 NSAVTAIDAKT---GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------KESVIWVVDGGNIK- 175 (353)
T ss_dssp TTEEEEEETTT---CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------SSCEEEEEETTTTE-
T ss_pred CCEEEEEeCCC---CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC----------CCceEEEEcCCCCc-
Confidence 56899999988 6666655543221 4668999999998775310 12347788876553
Q ss_pred eeeecC-CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe------CCcCeeeEEEcCCCCeEEEEccCCC
Q 020756 75 GLVPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL------GSGPYNTVRWNPKGKFLCLAGFGNL 146 (321)
Q Consensus 75 ~~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~------~~~~~~~~~~sPdG~~l~~~g~~n~ 146 (321)
....+. +...++++.|+|+|+.+++. ..++.+.+||.... .+..+ +......+.|+|+|++|++++. .
T Consensus 176 ~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~ 251 (353)
T 3vgz_A 176 LKTAIQNTGKMSTGLALDSEGKRLYTT--NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS--K 251 (353)
T ss_dssp EEEEECCCCTTCCCCEEETTTTEEEEE--CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES--S
T ss_pred eEEEecCCCCccceEEECCCCCEEEEE--cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC--C
Confidence 233333 44558899999999998886 45789999999654 33333 1334667999999998888762 3
Q ss_pred CCcEEEEECCCCeEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEEec-cCceEEEEEecCCC
Q 020756 147 PGDMAFWDYVDGKQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFKKM-FDKLFQAEWKPVSP 224 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~~~-~~~~~~~~w~P~~~ 224 (321)
++.|.+||+.+++.+..+.......+.|+|||++++++.. .++.+.+||.. ++.+.... ......+.|+|++.
T Consensus 252 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~-----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 252 AAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR-----QAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGK 326 (353)
T ss_dssp SSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET-----TTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSC
T ss_pred CCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC-----CCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCC
Confidence 4899999999998888777666677999999998877774 38899999995 55553332 34678899999988
Q ss_pred CCCCC
Q 020756 225 DKFGD 229 (321)
Q Consensus 225 ~~~~~ 229 (321)
.+|-.
T Consensus 327 ~l~v~ 331 (353)
T 3vgz_A 327 TLYVS 331 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77653
No 132
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.65 E-value=1.9e-15 Score=141.87 Aligned_cols=176 Identities=13% Similarity=0.143 Sum_probs=114.7
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-------
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE------- 74 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~------- 74 (321)
|.++.||||++.. +.++....-+......+.|+|++..+++....| |. +.+++......
T Consensus 163 s~D~tv~~Wd~~~---~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d---------~~--v~~wd~~t~~~~~~~~~~ 228 (393)
T 4gq1_A 163 GDDCTLIIWRLTD---EGPILAGYPLSSPGISVQFRPSNPNQLIVGERN---------GN--IRIFDWTLNLSAEENSQT 228 (393)
T ss_dssp ETTSEEEEEEEET---TEEEEEEEECSSCEEEEEEETTEEEEEEEEETT---------SE--EEEEETTCCC--------
T ss_pred ECCCeEEEEECCC---CceeeeecCCCCCcEEEEECCCCCceEEecCCC---------CE--EEEEECCCCccccccccc
Confidence 4678999999988 666666666677888999999997666654322 22 22333222110
Q ss_pred ------------------eeeecCCCCCeEEEEEC-cCCCEEEEEEccCCCeEEEEeCCCce-eEEe--CCcC-------
Q 020756 75 ------------------GLVPLRKEGPVHDVQWS-YSGSEFAVVYGFMPASATIFNKKCRP-ILEL--GSGP------- 125 (321)
Q Consensus 75 ------------------~~v~l~~~~~v~~~~ws-P~g~~l~~~~g~~~~~i~i~d~~~~~-~~~~--~~~~------- 125 (321)
......|...|..+.|+ |||+.|+.. ..++.+.+||+.... ...+ +...
T Consensus 229 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~--s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~ 306 (393)
T 4gq1_A 229 ELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM--CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLL 306 (393)
T ss_dssp --CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE--CTTSEEEEEEC-------------------CCS
T ss_pred CCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEE--eCCCCEEEEECccCCCCceEeeecCccccEEEc
Confidence 00112366788899986 899998884 778999999985321 1111 1111
Q ss_pred -----------eeeEEEcC-CCC-eEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCce
Q 020756 126 -----------YNTVRWNP-KGK-FLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRL 190 (321)
Q Consensus 126 -----------~~~~~~sP-dG~-~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl 190 (321)
.....|+| .++ +++.++ .||.|+|||+.+++++..+..+ .+..++|||||++||+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs---~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as----- 378 (393)
T 4gq1_A 307 PNVQGISLFPSLLGACPHPRYMDYFATAHS---QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT----- 378 (393)
T ss_dssp CSEEEECSSCCSSCCEECSSCTTEEEEEET---TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE-----
T ss_pred cccccccccCcceeEEEccCCCCEEEEEEC---CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe-----
Confidence 12233444 344 445555 7899999999988766554443 789999999999999998
Q ss_pred eecCcEEEEeecC
Q 020756 191 QIDNGIKIFHHNG 203 (321)
Q Consensus 191 ~~d~~v~iw~~~g 203 (321)
++++.||.+.|
T Consensus 379 --~~Gv~lvrL~g 389 (393)
T 4gq1_A 379 --EGSVLLTRLMG 389 (393)
T ss_dssp --SSEEEEEEEGG
T ss_pred --CCCeEEEEEeC
Confidence 88999998754
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.65 E-value=6.6e-15 Score=154.79 Aligned_cols=179 Identities=12% Similarity=0.069 Sum_probs=134.9
Q ss_pred ccceEEeC-CCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCC-CeEEEEECcCCCEEEEEEccCCCe
Q 020756 30 STVQLNWN-RGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEG-PVHDVQWSYSGSEFAVVYGFMPAS 107 (321)
Q Consensus 30 ~~~~~~Ws-p~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~-~v~~~~wsP~g~~l~~~~g~~~~~ 107 (321)
....+.|| |+|+.|++.. ...++.++..+.....+. .+.+ .+.+++|+ ||+.|+++.. +..
T Consensus 297 ~v~~~~~S~pdG~~la~~~-------------~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~s-dg~~l~~~s~--~~~ 359 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-------------RGQAFIQDVSGTYVLKVP-EPLRIRYVRRGGD-TKVAFIHGTR--EGD 359 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-------------TTEEEEECTTSSBEEECS-CCSCEEEEEECSS-SEEEEEEEET--TEE
T ss_pred ccceeeecCCCCCEEEEEE-------------cCEEEEEcCCCCceEEcc-CCCcceEEeeeEc-CCCeEEEEEC--CCc
Confidence 46789999 9999998863 124777877665433332 3555 88999999 9999998743 567
Q ss_pred EE-EEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEE
Q 020756 108 AT-IFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFM 182 (321)
Q Consensus 108 i~-i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~ 182 (321)
+. +||+.+.....+ +...+..+.|||||++|++++ .++.|++||+.+++.......+ .+..++|||||++|+
T Consensus 360 l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~---~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 360 FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAN---DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred eEEEEECCCCCceEecCCccceeeeEECCCCCEEEEEC---CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEE
Confidence 88 899877655555 456788999999999999998 7889999999999877766444 568899999999999
Q ss_pred EEEcCC----ceeecCcEEEEeecCcee--EEeccCceEEEEEecCCCCCCC
Q 020756 183 TATTAP----RLQIDNGIKIFHHNGSLF--FKKMFDKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 183 t~~s~~----rl~~d~~v~iw~~~g~~l--~~~~~~~~~~~~w~P~~~~~~~ 228 (321)
+++... ....++.+++||+.+..+ ...+...+..+.|+|++..++.
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEE
T ss_pred EEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEE
Confidence 887410 000135899999976544 2235557888999999987764
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.64 E-value=6.6e-14 Score=128.12 Aligned_cols=206 Identities=14% Similarity=0.168 Sum_probs=131.7
Q ss_pred CCceEEEEEcCCcCCCC--ceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecC
Q 020756 3 SPASVQIYACGKDLQSQ--PLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLR 80 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~--~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~ 80 (321)
..+.|.+|++.. +. .+............+.|+|+|++|++.... .+...+|.+..++.......+.
T Consensus 61 ~~~~v~~~~~~~---g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~---------~~~v~v~~~~~~g~~~~~~~~~ 128 (347)
T 3hfq_A 61 DEGGIAAWQIDG---QTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH---------KGTAEVMKIAADGALTLTDTVQ 128 (347)
T ss_dssp TEEEEEEEEEET---TEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT---------TTEEEEEEECTTSCEEEEEEEE
T ss_pred CCceEEEEEecC---CcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC---------CCEEEEEEeCCCCCeeecceee
Confidence 357899999965 33 333322234567789999999998875310 0233345554444322222222
Q ss_pred C----------CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeE---E--eC-CcCeeeEEEcCCCCeEEEEcc
Q 020756 81 K----------EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPIL---E--LG-SGPYNTVRWNPKGKFLCLAGF 143 (321)
Q Consensus 81 ~----------~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~---~--~~-~~~~~~~~~sPdG~~l~~~g~ 143 (321)
. ...+++++|+|+|+ ++++ +..++.+.+||+. ...+. . +. ......+.|+|||++|++++.
T Consensus 129 ~~~~~p~~~~~~~~~~~~~~spdg~-l~v~-~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 129 HSGHGPRPEQDGSHIHYTDLTPDNR-LAVI-DLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp CCCCCSSTTCSSCCEEEEEECTTSC-EEEE-ETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred cCCCCCCccccCCCceEEEECCCCc-EEEE-eCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence 2 12488999999999 5544 4556799999986 32222 2 22 235677999999998887652
Q ss_pred CCCCCcEEEEECCC--CeE--EEeeeC--------CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec--Cce--eE
Q 020756 144 GNLPGDMAFWDYVD--GKQ--LGTTRA--------ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN--GSL--FF 207 (321)
Q Consensus 144 ~n~~g~i~iwD~~~--~~~--i~~~~~--------~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~--g~~--l~ 207 (321)
.++.|.+||++. ++. +..+.. ..+..++|||||++|+++.. .++.+.+|++. |.+ +.
T Consensus 207 --~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~-----~~~~v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 207 --LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR-----GYNTLAVFAVTADGHLTLIQ 279 (347)
T ss_dssp --TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE-----TTTEEEEEEECGGGCEEEEE
T ss_pred --CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC-----CCCEEEEEEECCCCcEEEeE
Confidence 468999999874 542 233222 12667999999999866653 37899999985 332 22
Q ss_pred Ee--ccCceEEEEEecCCCCCCCC
Q 020756 208 KK--MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 208 ~~--~~~~~~~~~w~P~~~~~~~~ 229 (321)
.. +...+..++|+|++..++..
T Consensus 280 ~~~~~~~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 280 QISTEGDFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp EEECSSSCCCEEEECTTSSEEEEE
T ss_pred EEecCCCCcCeEEECCCCCEEEEE
Confidence 22 23357899999999877754
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.64 E-value=3.9e-14 Score=128.13 Aligned_cols=205 Identities=7% Similarity=0.081 Sum_probs=133.9
Q ss_pred CCceEEEEEcCCcCCCC--ceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee-eeec
Q 020756 3 SPASVQIYACGKDLQSQ--PLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG-LVPL 79 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~--~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~-~v~l 79 (321)
..+.|+||++... ++ .+... ........+.|+|+|++|++.... + +...+|.++..++... ...+
T Consensus 13 ~~~~v~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~-----~----~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 13 ESQQIHVWNLNHE--GALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRP-----E----FRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp GGTEEEEEEECTT--SCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETT-----T----TEEEEEEECTTTCCEEEEEEE
T ss_pred CCCeEEEEEECCC--CcEEEeeeE-ecCCCCceEEECCCCCEEEEeecC-----C----CeEEEEEecCCCCceeecccc
Confidence 4678999999641 22 22222 223456679999999998876321 0 2333444543233222 2223
Q ss_pred CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC---C-ceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEE
Q 020756 80 RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK---C-RPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWD 154 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~---~-~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD 154 (321)
...+.+.+++|+|+|++|++. +..++.+.+||+. . ..+..+ ....+..+.|+|+|++|++++. .++.|.+||
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~v~~~d 157 (343)
T 1ri6_A 81 ALPGSLTHISTDHQGQFVFVG-SYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL--KQDRICLFT 157 (343)
T ss_dssp ECSSCCSEEEECTTSSEEEEE-ETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG--GGTEEEEEE
T ss_pred ccCCCCcEEEEcCCCCEEEEE-ecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC--CCCEEEEEE
Confidence 334578999999999988776 3457799999982 2 233334 3456888999999998888763 358999999
Q ss_pred CCC-CeEEE----eeeC---CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec---Ccee--EEec--------cCc
Q 020756 155 YVD-GKQLG----TTRA---ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN---GSLF--FKKM--------FDK 213 (321)
Q Consensus 155 ~~~-~~~i~----~~~~---~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~---g~~l--~~~~--------~~~ 213 (321)
+.+ ++... .... ..+..++|+|||++|+++.. .++.+.+|+++ |.+. .... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~-----~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE-----LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET-----TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC-----CCCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 987 64322 2222 26778999999998887764 38899999984 3321 1111 124
Q ss_pred eEEEEEecCCCCCC
Q 020756 214 LFQAEWKPVSPDKF 227 (321)
Q Consensus 214 ~~~~~w~P~~~~~~ 227 (321)
+..+.|+|++..++
T Consensus 233 ~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 233 AADIHITPDGRHLY 246 (343)
T ss_dssp EEEEEECTTSSEEE
T ss_pred ccceEECCCCCEEE
Confidence 56799999998776
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.63 E-value=2.9e-14 Score=129.20 Aligned_cols=204 Identities=12% Similarity=0.062 Sum_probs=136.9
Q ss_pred CceEEEEEcCCcCCCCc-eeeeecccCccce-EEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 4 PASVQIYACGKDLQSQP-LARRSFFRCSTVQ-LNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~-i~~~~~f~~~~~~-~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
.+.|.+|++.+ ++. +...... ..... +.|+|+|++|++. . ..+ +...|+.++..... ....+..
T Consensus 61 ~~~i~~~d~~~---~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~-~----~~~----~~~~i~v~d~~~~~-~~~~~~~ 126 (331)
T 3u4y_A 61 CQTLVQIETQL---EPPKVVAIQEG-QSSMADVDITPDDQFAVTV-T----GLN----HPFNMQSYSFLKNK-FISTIPI 126 (331)
T ss_dssp TCEEEEEECSS---SSCEEEEEEEC-SSCCCCEEECTTSSEEEEC-C----CSS----SSCEEEEEETTTTE-EEEEEEC
T ss_pred CCeEEEEECCC---CceeEEecccC-CCCccceEECCCCCEEEEe-c----CCC----CcccEEEEECCCCC-eEEEEEC
Confidence 45789999887 555 4444443 34555 9999999999832 1 010 11147778876552 2223344
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCe-EEEEeCCCc-ee-----EEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEE
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPAS-ATIFNKKCR-PI-----LEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFW 153 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~-i~i~d~~~~-~~-----~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iw 153 (321)
....++++|+|+|++++++.. .+.. +.+|++... .+ ..+ .......+.|+|+|++|++++. .++.|.+|
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~ 203 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDR-SSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL--IGNSIGIL 203 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEE-TTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET--TTTEEEEE
T ss_pred CCCccceEECCCCCEEEEEec-CCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC--CCCeEEEE
Confidence 556799999999998777633 3456 999998532 11 122 3445788999999998877662 46899999
Q ss_pred ECCCCeE---EEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Cce--eEEe--c----cC---ceEEE
Q 020756 154 DYVDGKQ---LGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSL--FFKK--M----FD---KLFQA 217 (321)
Q Consensus 154 D~~~~~~---i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~--l~~~--~----~~---~~~~~ 217 (321)
|+.+++. +..+... .+..++|||||++|+++.. .++.+.+||.. |++ +... . .. ....+
T Consensus 204 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (331)
T 3u4y_A 204 ETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTE-----STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQM 278 (331)
T ss_dssp ECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECS-----SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCE
T ss_pred ECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEc-----CCCEEEEEECCCCceeeecccccccccCCCCcccccce
Confidence 9998876 7666654 6778999999998887764 37789999986 444 1111 1 11 22447
Q ss_pred EEecCCCCCCCC
Q 020756 218 EWKPVSPDKFGD 229 (321)
Q Consensus 218 ~w~P~~~~~~~~ 229 (321)
.|+|++..++..
T Consensus 279 ~~spdg~~l~v~ 290 (331)
T 3u4y_A 279 ALNKTETKLFIS 290 (331)
T ss_dssp EECTTSSEEEEE
T ss_pred EECCCCCEEEEe
Confidence 999999887643
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.63 E-value=6.2e-15 Score=148.57 Aligned_cols=199 Identities=7% Similarity=-0.018 Sum_probs=136.4
Q ss_pred ceEEEEEcCCcCCCC--ceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 5 ASVQIYACGKDLQSQ--PLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~--~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
+.|.+|++.. +. .+.+..........+.|||||++|++.. ...|++++..++....+...+.
T Consensus 129 ~~i~~~d~~~---~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-------------~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 129 GELYLYDLKQ---EGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-------------GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp TEEEEEESSS---CSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-------------TTEEEEEETTTTEEEECCCCCC
T ss_pred CcEEEEECCC---CCcceEEEcccCCcccccccCCCCCCEEEEEe-------------CCcEEEEecCCCCEEEeccCCc
Confidence 5789999987 42 3444444456678899999999998862 1158888887765544443333
Q ss_pred CC----------------eEEEEECcCCCEEEEEEccCC-----------------------------C--eEEEEeCCC
Q 020756 83 GP----------------VHDVQWSYSGSEFAVVYGFMP-----------------------------A--SATIFNKKC 115 (321)
Q Consensus 83 ~~----------------v~~~~wsP~g~~l~~~~g~~~-----------------------------~--~i~i~d~~~ 115 (321)
.. +.++.|||||++|+++..... . .|.+||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 478999999999998742210 1 678889876
Q ss_pred -ceeEEe-----CCcCeeeEEEcCCCCeEEEEcc--CCCCCcEEEEECCCCeEEEeeeCC------CeeeEEEccCCCEE
Q 020756 116 -RPILEL-----GSGPYNTVRWNPKGKFLCLAGF--GNLPGDMAFWDYVDGKQLGTTRAE------CSVTSEWSPDGRYF 181 (321)
Q Consensus 116 -~~~~~~-----~~~~~~~~~~sPdG~~l~~~g~--~n~~g~i~iwD~~~~~~i~~~~~~------~~~~~~wSpdG~~l 181 (321)
.....+ +...+..+.| |||++|+++.. ...+..|++||+.++++...+..+ .+..+.|||||+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 544443 3456788999 99999998753 223578999999998766555432 23578999999976
Q ss_pred EEEEcCCceeecCcEEEEee--cCcee--EEeccCceEEE-EEecCCCCCC
Q 020756 182 MTATTAPRLQIDNGIKIFHH--NGSLF--FKKMFDKLFQA-EWKPVSPDKF 227 (321)
Q Consensus 182 ~t~~s~~rl~~d~~v~iw~~--~g~~l--~~~~~~~~~~~-~w~P~~~~~~ 227 (321)
+++. .++.++||.+ +|. + ...+...+..+ .|+|+...++
T Consensus 352 ~~~~------~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~ 395 (741)
T 2ecf_A 352 WSSE------RTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAY 395 (741)
T ss_dssp EEEC------TTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEE
T ss_pred EEec------CCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEE
Confidence 6665 3666677765 465 3 22334466676 5999987664
No 138
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.63 E-value=1.7e-14 Score=133.56 Aligned_cols=211 Identities=10% Similarity=0.012 Sum_probs=140.7
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccce-----EEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQ-----LNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP 78 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~-----~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~ 78 (321)
|+...+|-.+.. +.++.+.+........ ..|||||++|++.... . |..+||.++..+....++.
T Consensus 8 ~~~~~~~~~~~~--g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~----~-----g~~~l~~~d~~~g~~~~lt 76 (388)
T 3pe7_A 8 PLTFDTYQDAST--GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF----D-----GPWNYYLLDLNTQVATQLT 76 (388)
T ss_dssp ECCCEEEECTTT--CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT----T-----SSCEEEEEETTTCEEEECC
T ss_pred cccceEEecCCC--CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC----C-----CCceEEEEeCCCCceEEee
Confidence 445566766652 5667776655544444 7899999999987421 1 3446899998887555554
Q ss_pred cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeE---EeCCcCeeeE--EEcCCCCeEEEEcc----------
Q 020756 79 LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPIL---ELGSGPYNTV--RWNPKGKFLCLAGF---------- 143 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~---~~~~~~~~~~--~~sPdG~~l~~~g~---------- 143 (321)
-.+...+..+.|||||+.|+++. .+..+.+||+.+.... .++...+... .++|+|++|+....
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~--~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~ 154 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVK--DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTD 154 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEE--TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred eCCCCCccceEEcCCCCEEEEEe--CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccc
Confidence 44445555788999999999874 4568999999654332 3344434333 45999999875310
Q ss_pred ---------CCCCCcEEEEECCCCeEEEeeeCC-CeeeEEEcc-CCCEEEEEEcCCceeecCcEEEEeecCceeEEe--c
Q 020756 144 ---------GNLPGDMAFWDYVDGKQLGTTRAE-CSVTSEWSP-DGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKK--M 210 (321)
Q Consensus 144 ---------~n~~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSp-dG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~--~ 210 (321)
.+.+..|++||+.+++........ .+..+.||| ||++|+++...+.......|.+++..|..+... +
T Consensus 155 ~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 234 (388)
T 3pe7_A 155 WKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH 234 (388)
T ss_dssp HHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC
T ss_pred cchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC
Confidence 123478999999988655544443 678899999 999999988532211244788888876544222 2
Q ss_pred c--CceEEEEEecCCCCCC
Q 020756 211 F--DKLFQAEWKPVSPDKF 227 (321)
Q Consensus 211 ~--~~~~~~~w~P~~~~~~ 227 (321)
. ..+..+.|+|++..++
T Consensus 235 ~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp CTTEEEEEEEECTTSSCEE
T ss_pred CCCcccccceECCCCCEEE
Confidence 2 2467889999998774
No 139
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.63 E-value=4.3e-14 Score=133.91 Aligned_cols=192 Identities=10% Similarity=0.180 Sum_probs=141.8
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee---eee
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG---LVP 78 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~---~v~ 78 (321)
+..+.|+||++.+ ++.+............+.|++ ..++.. ..| |. +.+++....... ...
T Consensus 190 ~~dg~i~vwd~~~---~~~~~~~~~h~~~v~~l~~~~--~~l~s~-s~d---------g~--i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 190 SSDSTVRVWDVNT---GEMLNTLIHHCEAVLHLRFNN--GMMVTC-SKD---------RS--IAVWDMASPTDITLRRVL 252 (435)
T ss_dssp ETTSCEEEEESSS---CCEEEEECCCCSCEEEEECCT--TEEEEE-ETT---------SC--EEEEECSSSSCCEEEEEE
T ss_pred cCCCeEEEEECCC---CcEEEEEcCCCCcEEEEEEcC--CEEEEe-eCC---------Cc--EEEEeCCCCCCceeeeEe
Confidence 3567899999988 677777666677788888874 344332 211 22 455555443222 344
Q ss_pred cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEEC
Q 020756 79 LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDY 155 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~ 155 (321)
..|.+.|.++.| +++.|++. ..++.+.+||++. ..+..+ |...+.++.| ++++|++++ .+|.|++||+
T Consensus 253 ~~~~~~v~~~~~--~~~~l~s~--~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~---~dg~i~iwd~ 323 (435)
T 1p22_A 253 VGHRAAVNVVDF--DDKYIVSA--SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGS---SDNTIRLWDI 323 (435)
T ss_dssp CCCSSCEEEEEE--ETTEEEEE--ETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEE---TTSCEEEEET
T ss_pred cCCCCcEEEEEe--CCCEEEEE--eCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEe---CCCeEEEEEC
Confidence 568899999999 77888874 6689999999954 455555 6788999988 478999998 8999999999
Q ss_pred CCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-c---------ee--EEeccCceEEEEEec
Q 020756 156 VDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-S---------LF--FKKMFDKLFQAEWKP 221 (321)
Q Consensus 156 ~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-~---------~l--~~~~~~~~~~~~w~P 221 (321)
++++++..+..| .+..++| ||.+|++++. |+.|+|||+.. . .+ ...|...+..+.|
T Consensus 324 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-- 393 (435)
T 1p22_A 324 ECGACLRVLEGHEELVRCIRF--DNKRIVSGAY------DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-- 393 (435)
T ss_dssp TTCCEEEEECCCSSCEEEEEC--CSSEEEEEET------TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--
T ss_pred CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeC------CCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--
Confidence 999999988876 5777777 8999999994 99999999842 2 33 4457778999999
Q ss_pred CCCCCCCC
Q 020756 222 VSPDKFGD 229 (321)
Q Consensus 222 ~~~~~~~~ 229 (321)
++..+++.
T Consensus 394 ~~~~l~s~ 401 (435)
T 1p22_A 394 DEFQIVSS 401 (435)
T ss_dssp CSSCEEEC
T ss_pred CCCEEEEE
Confidence 55556654
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.63 E-value=7.8e-14 Score=125.79 Aligned_cols=200 Identities=11% Similarity=0.098 Sum_probs=137.3
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccC--ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eeeeec
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRC--STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGLVPL 79 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~--~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~v~l 79 (321)
..+.|.+|++.+ ++.+........ ....+.|+|+|+.+++... ....|+.++..... ...+.+
T Consensus 9 ~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~-----------~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 9 RPDKLVVIDTEK---MAVDKVITIADAGPTPMVPMVAPGGRIAYATVN-----------KSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp TTTEEEEEETTT---TEEEEEEECTTCTTCCCCEEECTTSSEEEEEET-----------TTTEEEEEETTTCCEEEEEEC
T ss_pred CCCeEEEEECCC---CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC-----------CCCeEEEEECCCCCeEeeEEc
Confidence 468899999988 666665554332 4678999999998877531 12247777775442 223443
Q ss_pred CCC----CCeEEEEECcCCCEEEEEEcc----------CCCeEEEEeCCCc-eeEEe-CCcCeeeEEEcCCCCeEEEEcc
Q 020756 80 RKE----GPVHDVQWSYSGSEFAVVYGF----------MPASATIFNKKCR-PILEL-GSGPYNTVRWNPKGKFLCLAGF 143 (321)
Q Consensus 80 ~~~----~~v~~~~wsP~g~~l~~~~g~----------~~~~i~i~d~~~~-~~~~~-~~~~~~~~~~sPdG~~l~~~g~ 143 (321)
.+. ..+.+++|+|+|++++++... .++.|.+||+... .+..+ ....+..+.|+|+|++|++++
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~- 153 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG- 153 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEES-
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC-
Confidence 321 167789999999998886311 4689999999654 44444 345677899999999988873
Q ss_pred CCCCCcEEEEECCCCeEEEeeeCC--------------------------------------------------------
Q 020756 144 GNLPGDMAFWDYVDGKQLGTTRAE-------------------------------------------------------- 167 (321)
Q Consensus 144 ~n~~g~i~iwD~~~~~~i~~~~~~-------------------------------------------------------- 167 (321)
+.|++||+.+++.+..+..+
T Consensus 154 ----~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 229 (337)
T 1pby_B 154 ----RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG 229 (337)
T ss_dssp ----SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC
T ss_pred ----CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC
Confidence 67889998887665443221
Q ss_pred ------------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-ceeEEe-ccCceEEEEEecCCCCCCCC
Q 020756 168 ------------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-SLFFKK-MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 168 ------------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-~~l~~~-~~~~~~~~~w~P~~~~~~~~ 229 (321)
.+..++|+|||++|+++ ++.+.+||+.. +.+... ....+..+.|+|+...++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 230 EMAMREVRIMDVFYFSTAVNPAKTRAFGA--------YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEE--------ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE
T ss_pred CceEeecCCCCCceeeEEECCCCCEEEEe--------CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE
Confidence 12247899999988766 47899999854 444332 23467889999998877653
No 141
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.63 E-value=2e-14 Score=132.45 Aligned_cols=140 Identities=9% Similarity=0.051 Sum_probs=94.4
Q ss_pred CCCeEEEEECc---CCCEEEEEEccCCCeEEEEeCC-CceeEEe--CC---cCeeeEEEcCCCCeEEEEcc---------
Q 020756 82 EGPVHDVQWSY---SGSEFAVVYGFMPASATIFNKK-CRPILEL--GS---GPYNTVRWNPKGKFLCLAGF--------- 143 (321)
Q Consensus 82 ~~~v~~~~wsP---~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~--~~---~~~~~~~~sPdG~~l~~~g~--------- 143 (321)
...+..++|+| ++..|+. +..|++|+|||++ ++.+.++ |. ..+.+++|||+|+++++++.
T Consensus 178 ~~~v~~l~fs~~~g~~~~LaS--gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 178 PPEETILTFAEVQGMQEALLG--TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp CCSSCEEEEEEEETSTTEEEE--EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----------
T ss_pred CCceeeEEeeccCCCCceEEE--ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 33444444544 3344444 5779999999996 5567777 22 24567799999998865331
Q ss_pred CCCCCcEEEEECCCCeEEEee-----eCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEE--eccCceE
Q 020756 144 GNLPGDMAFWDYVDGKQLGTT-----RAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFK--KMFDKLF 215 (321)
Q Consensus 144 ~n~~g~i~iwD~~~~~~i~~~-----~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~--~~~~~~~ 215 (321)
+..|++|++||..+++.+..+ .++....++.+.+|.++++++. |++|+|||+ +|+++.. .|...+.
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~------DgTIkIWDl~tGk~l~tL~gH~~~vv 329 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILT------SGTIAIWDLLLGQCTALLPPVSDQHW 329 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEET------TSCEEEEETTTCSEEEEECCC--CCC
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcC------CCcEEEEECCCCcEEEEecCCCCCeE
Confidence 347899999999999887655 2332223344445888898884 999999999 4666644 4555554
Q ss_pred -EEEEecCCCCCCCC
Q 020756 216 -QAEWKPVSPDKFGD 229 (321)
Q Consensus 216 -~~~w~P~~~~~~~~ 229 (321)
.++|+|++..+++.
T Consensus 330 s~vafSPDG~~LaSG 344 (356)
T 2w18_A 330 SFVKWSGTDSHLLAG 344 (356)
T ss_dssp CEEEECSSSSEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 58999999888865
No 142
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.62 E-value=1.5e-13 Score=130.24 Aligned_cols=192 Identities=11% Similarity=0.135 Sum_probs=136.6
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+ ++.+............+.| +|+.+++.. . ...+.+++............|.
T Consensus 217 ~dg~i~~wd~~~---~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~-----------dg~i~iwd~~~~~~~~~~~~~~ 279 (445)
T 2ovr_B 217 RDATLRVWDIET---GQCLHVLMGHVAAVRCVQY--DGRRVVSGA-Y-----------DFMVKVWDPETETCLHTLQGHT 279 (445)
T ss_dssp TTSEEEEEESSS---CCEEEEEECCSSCEEEEEE--CSSCEEEEE-T-----------TSCEEEEEGGGTEEEEEECCCS
T ss_pred CCCEEEEEECCC---CcEEEEEcCCcccEEEEEE--CCCEEEEEc-C-----------CCEEEEEECCCCcEeEEecCCC
Confidence 456778888777 5666665555666666666 566655532 1 1125555554442222223478
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK 159 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~ 159 (321)
..|.++.| ++..|++ +..++.+.+||++ +..+..+ +...+.++.+ ++++|++++ .+|.|.+||+.+++
T Consensus 280 ~~v~~~~~--~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~---~dg~i~vwd~~~~~ 350 (445)
T 2ovr_B 280 NRVYSLQF--DGIHVVS--GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGN---ADSTVKIWDIKTGQ 350 (445)
T ss_dssp SCEEEEEE--CSSEEEE--EETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEE---TTSCEEEEETTTCC
T ss_pred CceEEEEE--CCCEEEE--EeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEe---CCCeEEEEECCCCc
Confidence 89999999 7888877 4678999999995 4556666 5566666665 578999998 89999999999999
Q ss_pred EEEeeeC---C--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEE-------eccCceEEEEEecCCCCC
Q 020756 160 QLGTTRA---E--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFK-------KMFDKLFQAEWKPVSPDK 226 (321)
Q Consensus 160 ~i~~~~~---~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~-------~~~~~~~~~~w~P~~~~~ 226 (321)
.+..+.. + .+++++|+ +++|++++. |+.|+|||+. |+.+.. .+...++.+.|+|+...+
T Consensus 351 ~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 422 (445)
T 2ovr_B 351 CLQTLQGPNKHQSAVTCLQFN--KNFVITSSD------DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVC 422 (445)
T ss_dssp EEEEECSTTSCSSCEEEEEEC--SSEEEEEET------TSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEE
T ss_pred EEEEEccCCCCCCCEEEEEEC--CCEEEEEeC------CCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEE
Confidence 8888875 3 57778884 789999994 9999999984 665533 244679999999987655
Q ss_pred CC
Q 020756 227 FG 228 (321)
Q Consensus 227 ~~ 228 (321)
+.
T Consensus 423 a~ 424 (445)
T 2ovr_B 423 AV 424 (445)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.62 E-value=1.1e-14 Score=146.33 Aligned_cols=203 Identities=13% Similarity=0.072 Sum_probs=133.0
Q ss_pred CceEEEEEcCCcCCCCceeeeeccc---CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFR---CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLR 80 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~---~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~ 80 (321)
.+.|.||++.. ++. .+..... .....+.|||||+.|++... .+|++++..++...++...
T Consensus 90 ~~~i~~~d~~~---~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-------------~~i~~~~~~~g~~~~~~~~ 152 (723)
T 1xfd_A 90 TGYYVLSKIPH---GDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-------------NNIYYCAHVGKQAIRVVST 152 (723)
T ss_dssp CSEEEEEESSS---CCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-------------TEEEEESSSSSCCEEEECC
T ss_pred eeeEEEEECCC---Cce-EeccCCccccccccccEECCCCCEEEEEEC-------------CeEEEEECCCCceEEEecC
Confidence 47889999987 443 2222221 22567899999999998631 2588888877655555444
Q ss_pred CCCCe------------------EEEEECcCCCEEEEEEccC--------------------------------CCeEEE
Q 020756 81 KEGPV------------------HDVQWSYSGSEFAVVYGFM--------------------------------PASATI 110 (321)
Q Consensus 81 ~~~~v------------------~~~~wsP~g~~l~~~~g~~--------------------------------~~~i~i 110 (321)
+...+ .+++|||||+.|+++.... ...+.+
T Consensus 153 ~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~ 232 (723)
T 1xfd_A 153 GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHV 232 (723)
T ss_dssp CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEE
T ss_pred CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEE
Confidence 33333 7899999999999874221 127889
Q ss_pred EeCCCce-eEEeC--------CcCeeeEEEcCCCCeEEEEcc-CCCCCcEEEEECCCCeEEEeeeC-C--Ce----eeEE
Q 020756 111 FNKKCRP-ILELG--------SGPYNTVRWNPKGKFLCLAGF-GNLPGDMAFWDYVDGKQLGTTRA-E--CS----VTSE 173 (321)
Q Consensus 111 ~d~~~~~-~~~~~--------~~~~~~~~~sPdG~~l~~~g~-~n~~g~i~iwD~~~~~~i~~~~~-~--~~----~~~~ 173 (321)
||+.+.. ...+. ...+..+.|||||++|++... +..+..|++||+.++++...+.. + .+ ..+.
T Consensus 233 ~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 312 (723)
T 1xfd_A 233 IGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPV 312 (723)
T ss_dssp EESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCE
T ss_pred EECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCce
Confidence 9996654 34442 456788999999998877642 22346899999999876554432 1 22 3789
Q ss_pred EccCCCEEEEEEcCCceeecC------cEEEEe-ecCce---e--EEeccCceEE-EEEecCCCCCC
Q 020756 174 WSPDGRYFMTATTAPRLQIDN------GIKIFH-HNGSL---F--FKKMFDKLFQ-AEWKPVSPDKF 227 (321)
Q Consensus 174 wSpdG~~l~t~~s~~rl~~d~------~v~iw~-~~g~~---l--~~~~~~~~~~-~~w~P~~~~~~ 227 (321)
|||||++|++.++. .++ .+.+|| ..+.. + .......+.. +.|+|++..++
T Consensus 313 ~spdg~~l~~~~~~----~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~ 375 (723)
T 1xfd_A 313 FSKDGRKFFFIRAI----PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIY 375 (723)
T ss_dssp ECTTSCSEEEEEEE----CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEE
T ss_pred EcCCCCeEEEEEec----ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEE
Confidence 99999999876321 244 466777 34433 3 2212223444 69999998775
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.61 E-value=4.4e-15 Score=146.01 Aligned_cols=202 Identities=12% Similarity=0.046 Sum_probs=131.8
Q ss_pred CceEEEEEcCCcCCCCceeeeeccc-CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEc--CCCceeeeecC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFR-CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTT--DGTHEGLVPLR 80 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~-~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~--~g~~~~~v~l~ 80 (321)
.+.++||.+.. ....+.+.+. .....+.|||| .+++.+..+ ... ....||.++. .+... .+.
T Consensus 43 ~g~~~lw~~~~----g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~--~g~----~~~~l~~~~~~~~g~~~---~l~ 107 (582)
T 3o4h_A 43 EGSVNAYLYDG----GETVKLNREPINSVLDPHYGVG--RVILVRDVS--KGA----EQHALFKVNTSRPGEEQ---RLE 107 (582)
T ss_dssp TTEEEEEEEET----TEEEECCSSCCSEECEECTTCS--EEEEEEECS--TTS----CCEEEEEEETTSTTCCE---ECT
T ss_pred CCceeEEEEcC----CCcEeeecccccccccccCCCC--eEEEEeccC--CCC----cceEEEEEeccCCCccc---ccc
Confidence 57899999843 4555666555 46788999998 555543211 111 1235888888 66532 333
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeCCcCeeeEEEcCCCCeEEEEccCC-CCCcEEEEECCCCe
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELGSGPYNTVRWNPKGKFLCLAGFGN-LPGDMAFWDYVDGK 159 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~~~~sPdG~~l~~~g~~n-~~g~i~iwD~~~~~ 159 (321)
....+...+|+|||+.++++.+..+ .+.|||+.+.....+...+..++.|||||++|++++... ..+.|++||+.+++
T Consensus 108 ~~~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 108 AVKPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG 186 (582)
T ss_dssp TSCSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC
T ss_pred CCCCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC
Confidence 3445667899999997777655544 455999976655554222228999999999999876221 11679999998886
Q ss_pred EEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecC--cEEEEeecCceeE--EeccCceEEEE--------EecCCCCC
Q 020756 160 QLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDN--GIKIFHHNGSLFF--KKMFDKLFQAE--------WKPVSPDK 226 (321)
Q Consensus 160 ~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~--~v~iw~~~g~~l~--~~~~~~~~~~~--------w~P~~~~~ 226 (321)
......+. .+..++|||||++|+++. .++ .|++||+.+..+. ..+...+..+. |+|++..+
T Consensus 187 ~~~l~~~~~~~~~~~~SpDG~~l~~~~------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 260 (582)
T 3o4h_A 187 LRVFDSGEGSFSSASISPGMKVTAGLE------TAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLA 260 (582)
T ss_dssp CEEECCSSCEEEEEEECTTSCEEEEEE------CSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEE
T ss_pred ceEeecCCCccccceECCCCCEEEEcc------CCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEE
Confidence 55433332 567899999999999555 255 7999998654332 22333444455 99998333
Q ss_pred C
Q 020756 227 F 227 (321)
Q Consensus 227 ~ 227 (321)
+
T Consensus 261 ~ 261 (582)
T 3o4h_A 261 V 261 (582)
T ss_dssp E
T ss_pred E
Confidence 3
No 145
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.61 E-value=1.8e-13 Score=129.68 Aligned_cols=193 Identities=10% Similarity=0.147 Sum_probs=136.2
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~ 82 (321)
..+.|+||++.+ ++.+.....+......+.|+ ++.+++.. ....+.+++............|.
T Consensus 177 ~dg~i~vwd~~~---~~~~~~~~~h~~~v~~~~~~--~~~l~s~s------------~dg~i~~wd~~~~~~~~~~~~~~ 239 (445)
T 2ovr_B 177 TDRTLKVWNAET---GECIHTLYGHTSTVRCMHLH--EKRVVSGS------------RDATLRVWDIETGQCLHVLMGHV 239 (445)
T ss_dssp TTSCEEEEETTT---TEEEEEECCCSSCEEEEEEE--TTEEEEEE------------TTSEEEEEESSSCCEEEEEECCS
T ss_pred CCCeEEEEECCc---CcEEEEECCCCCcEEEEEec--CCEEEEEe------------CCCEEEEEECCCCcEEEEEcCCc
Confidence 456677777766 55555555555556666664 34443321 11235666665443333334588
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK 159 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~ 159 (321)
.+|.++.| +|+.|++. ..++.+.+||++. ..+..+ |...+.++.| +|++|++++ .++.|++||+.+++
T Consensus 240 ~~v~~~~~--~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~---~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 240 AAVRCVQY--DGRRVVSG--AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGS---LDTSIRVWDVETGN 310 (445)
T ss_dssp SCEEEEEE--CSSCEEEE--ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEE---TTSCEEEEETTTCC
T ss_pred ccEEEEEE--CCCEEEEE--cCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEe---CCCeEEEEECCCCC
Confidence 99999999 67788774 6688999999854 455565 6788999999 899999999 89999999999999
Q ss_pred EEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe-----ccCceEEEEEecCCCCCCCC
Q 020756 160 QLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK-----MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 160 ~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~-----~~~~~~~~~w~P~~~~~~~~ 229 (321)
++..+..+......+++++.+|++++. |+.++|||+ +++.+... +...+..+.|++ ..+++.
T Consensus 311 ~~~~~~~~~~~v~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~ 378 (445)
T 2ovr_B 311 CIHTLTGHQSLTSGMELKDNILVSGNA------DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITS 378 (445)
T ss_dssp EEEEECCCCSCEEEEEEETTEEEEEET------TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS--SEEEEE
T ss_pred EEEEEcCCcccEEEEEEeCCEEEEEeC------CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC--CEEEEE
Confidence 999888774444455667889999994 999999998 56655332 556799999964 344443
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.61 E-value=4.2e-13 Score=123.54 Aligned_cols=173 Identities=14% Similarity=0.158 Sum_probs=114.2
Q ss_pred ceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC------c-----eeeeecCCCCCeEEEEECcCCCEEEEE
Q 020756 32 VQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT------H-----EGLVPLRKEGPVHDVQWSYSGSEFAVV 100 (321)
Q Consensus 32 ~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~------~-----~~~v~l~~~~~v~~~~wsP~g~~l~~~ 100 (321)
..+.|+|+|++|++.... . +...+|.++..+. . ...+.+........++|+|||++++++
T Consensus 158 ~~~~~spdg~~l~~~~~~----~-----~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 228 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLG----T-----DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLI 228 (361)
T ss_dssp EEEEECTTSSEEEEEETT----T-----TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred eEEEECCCCCEEEEEeCC----C-----CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEE
Confidence 458999999998875210 0 2223444444332 1 023344455677899999999988876
Q ss_pred EccCCCeEEEEeCCCcee---EEe-----CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC--CCe--EEEeeeC-C
Q 020756 101 YGFMPASATIFNKKCRPI---LEL-----GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV--DGK--QLGTTRA-E 167 (321)
Q Consensus 101 ~g~~~~~i~i~d~~~~~~---~~~-----~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~--~~~--~i~~~~~-~ 167 (321)
+..++.|.+||+....+ ..+ +......+.|+|||++|+++..+ .++.|.+||++ +++ .+..+.. .
T Consensus 229 -~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~-~~~~i~v~~~~~~~g~~~~~~~~~~g~ 306 (361)
T 3scy_A 229 -NEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL-KADGVAIFKVDETNGTLTKVGYQLTGI 306 (361)
T ss_dssp -ETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS-SSCEEEEEEECTTTCCEEEEEEEECSS
T ss_pred -cCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC-CCCEEEEEEEcCCCCcEEEeeEecCCC
Confidence 34578999999864332 222 12345689999999999877622 04789999985 443 4444433 3
Q ss_pred CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec---CceeEE---eccCceEEEEEe
Q 020756 168 CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN---GSLFFK---KMFDKLFQAEWK 220 (321)
Q Consensus 168 ~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~---g~~l~~---~~~~~~~~~~w~ 220 (321)
.+..++|||||++|+++.. .++.+.||+++ |++... .+.....++.|.
T Consensus 307 ~~~~~~~spdg~~l~~~~~-----~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 307 HPRNFIITPNGKYLLVACR-----DTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CCCEEEECTTSCEEEEEET-----TTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCceEEECCCCCEEEEEEC-----CCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 6778999999999999885 37889998764 554422 244567777775
No 147
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.60 E-value=1.8e-13 Score=129.62 Aligned_cols=192 Identities=10% Similarity=0.126 Sum_probs=142.9
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
+..+.|+||++.+ ++.+.....+...+..+.| +|+.|++.. .| | .+.+++............|
T Consensus 150 ~~dg~i~iwd~~~---~~~~~~~~~h~~~v~~l~~--~~~~l~sg~-~d---------g--~i~vwd~~~~~~~~~~~~h 212 (435)
T 1p22_A 150 LRDNTIKIWDKNT---LECKRILTGHTGSVLCLQY--DERVIITGS-SD---------S--TVRVWDVNTGEMLNTLIHH 212 (435)
T ss_dssp ESSSCEEEEESSS---CCEEEEECCCSSCEEEEEC--CSSEEEEEE-TT---------S--CEEEEESSSCCEEEEECCC
T ss_pred eCCCeEEEEeCCC---CeEEEEEcCCCCcEEEEEE--CCCEEEEEc-CC---------C--eEEEEECCCCcEEEEEcCC
Confidence 3568899999988 6777777777778888888 677665542 11 2 2555665544333333458
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-ee---EEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEEC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PI---LEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDY 155 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~---~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~ 155 (321)
.+.|.++.|++ ..|++ +..++.|.+||+... .+ ..+ |...+.++.| +|++|++++ .+|.|.+||+
T Consensus 213 ~~~v~~l~~~~--~~l~s--~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~---~dg~i~vwd~ 283 (435)
T 1p22_A 213 CEAVLHLRFNN--GMMVT--CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSAS---GDRTIKVWNT 283 (435)
T ss_dssp CSCEEEEECCT--TEEEE--EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEE---TTSEEEEEET
T ss_pred CCcEEEEEEcC--CEEEE--eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEe---CCCeEEEEEC
Confidence 89999999985 46666 467899999999543 22 233 6788999999 789999999 8999999999
Q ss_pred CCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee--EEeccCceEEEEEecCCCCCCCC
Q 020756 156 VDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF--FKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 156 ~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l--~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
++++++..+..+ .+..+.| ++++|++++. |+.|+|||+. |+.+ ...|...+..+.| ++..+++.
T Consensus 284 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 284 STCEFVRTLNGHKRGIACLQY--RDRLVVSGSS------DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp TTCCEEEEEECCSSCEEEEEE--ETTEEEEEET------TSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeC------CCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 999999988876 5677777 6889999994 9999999995 6655 4456778999988 44445543
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.60 E-value=1.5e-13 Score=124.22 Aligned_cols=205 Identities=13% Similarity=0.115 Sum_probs=131.8
Q ss_pred ceEEEEEcCCcCCCC--ceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eeeeecCC
Q 020756 5 ASVQIYACGKDLQSQ--PLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGLVPLRK 81 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~--~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~v~l~~ 81 (321)
+.|.+|++.... ++ .+..... ......+.|+|+|++|++.... . +...+|.++ ++.. .....+..
T Consensus 60 ~~v~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~----~-----~~i~~~d~~-~~~~~~~~~~~~~ 127 (343)
T 1ri6_A 60 FRVLAYRIAPDD-GALTFAAESAL-PGSLTHISTDHQGQFVFVGSYN----A-----GNVSVTRLE-DGLPVGVVDVVEG 127 (343)
T ss_dssp TEEEEEEECTTT-CCEEEEEEEEC-SSCCSEEEECTTSSEEEEEETT----T-----TEEEEEEEE-TTEEEEEEEEECC
T ss_pred CeEEEEEecCCC-Cceeecccccc-CCCCcEEEEcCCCCEEEEEecC----C-----CeEEEEECC-CCccccccccccC
Confidence 789999997311 22 2222222 2367789999999998775311 1 223344443 3321 12222344
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeE-------Ee-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEE
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPIL-------EL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAF 152 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~-------~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~i 152 (321)
...+++++|+|+|++++++. ..++.+.+||+.. ..+. .. .......+.|+|+|++|++++. .++.|.+
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~-~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~--~~~~i~~ 204 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPA-LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE--LNSSVDV 204 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEE-GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET--TTTEEEE
T ss_pred CCCceEEEECCCCCEEEEec-CCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC--CCCEEEE
Confidence 55689999999999888763 3567999999864 3221 22 2346778999999998877652 5689999
Q ss_pred EECCC--Ce--EEEeee---C-----CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec--Cc---eeEEe-ccCce
Q 020756 153 WDYVD--GK--QLGTTR---A-----ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN--GS---LFFKK-MFDKL 214 (321)
Q Consensus 153 wD~~~--~~--~i~~~~---~-----~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~--g~---~l~~~-~~~~~ 214 (321)
||++. ++ .+.... . ..+..++|+|||++|+++.. .++.+.+|++. +. .+... ....+
T Consensus 205 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~-----~~~~i~v~d~~~~~~~~~~~~~~~~~~~~ 279 (343)
T 1ri6_A 205 WELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR-----TASLITVFSVSEDGSVLSKEGFQPTETQP 279 (343)
T ss_dssp EESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET-----TTTEEEEEEECTTSCCEEEEEEEECSSSC
T ss_pred EEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec-----CCCEEEEEEEcCCCCceEEeeeecCCCcc
Confidence 99953 32 222222 1 13456999999999987664 38899999996 32 22221 22347
Q ss_pred EEEEEecCCCCCCCC
Q 020756 215 FQAEWKPVSPDKFGD 229 (321)
Q Consensus 215 ~~~~w~P~~~~~~~~ 229 (321)
..+.|+|++..++..
T Consensus 280 ~~~~~s~dg~~l~~~ 294 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAA 294 (343)
T ss_dssp CCEEECTTSSEEEEE
T ss_pred ceEEECCCCCEEEEe
Confidence 889999998877754
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.59 E-value=2.4e-13 Score=136.38 Aligned_cols=187 Identities=10% Similarity=0.107 Sum_probs=124.5
Q ss_pred ceEEeCCCCCeeEEEEEecccC----------------------CCceeecceeEEEEEcCCCceeeeec--CCCCCeEE
Q 020756 32 VQLNWNRGSTGLLAVAQSDVDK----------------------TNQSYYGESKLNYLTTDGTHEGLVPL--RKEGPVHD 87 (321)
Q Consensus 32 ~~~~Wsp~G~~l~~~~~~d~d~----------------------t~~s~~g~~~l~~l~~~g~~~~~v~l--~~~~~v~~ 87 (321)
..+.|||||++|++....+... .+. ..+...|+++++.+.....+.. .+...+.+
T Consensus 184 ~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~-~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 184 KGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT-PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS-CCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred ceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC-CCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 6889999999998874211000 000 0134568899987764444432 35567899
Q ss_pred EEECcCCCEEEEEEccCC---CeEEEEeCCCc-eeEEe----CCc---CeeeEEEcC--CCCeEEEEccCCCCCcEEEEE
Q 020756 88 VQWSYSGSEFAVVYGFMP---ASATIFNKKCR-PILEL----GSG---PYNTVRWNP--KGKFLCLAGFGNLPGDMAFWD 154 (321)
Q Consensus 88 ~~wsP~g~~l~~~~g~~~---~~i~i~d~~~~-~~~~~----~~~---~~~~~~~sP--dG~~l~~~g~~n~~g~i~iwD 154 (321)
++|+|||+.|++...... ..+.+||+.+. ....+ +.. .+..+.|+| ||++|+++. .++.+.||+
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~---~~g~~~l~~ 339 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR---RDGWNHLYL 339 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC---TTSSCEEEE
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc---cCCccEEEE
Confidence 999999999988643221 28899999655 44333 222 246789999 999888776 667777777
Q ss_pred CC-CCeEEEeeeCC--Ceee-EEEccCCCEEEEEEcCCceeecC----cEEEEeecCcee-EEeccCceEEEEEecCCCC
Q 020756 155 YV-DGKQLGTTRAE--CSVT-SEWSPDGRYFMTATTAPRLQIDN----GIKIFHHNGSLF-FKKMFDKLFQAEWKPVSPD 225 (321)
Q Consensus 155 ~~-~~~~i~~~~~~--~~~~-~~wSpdG~~l~t~~s~~rl~~d~----~v~iw~~~g~~l-~~~~~~~~~~~~w~P~~~~ 225 (321)
++ ++..+..+..+ .+.. +.|||||++|+++++. ++ .|.+|+..+..+ ...+...+..+.|+|++..
T Consensus 340 ~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~-----~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~ 414 (706)
T 2z3z_A 340 YDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE-----ASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSA 414 (706)
T ss_dssp EETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS-----SCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSE
T ss_pred EECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC-----CCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCE
Confidence 65 55566655554 4555 7999999999888752 33 455666644333 2234557889999999876
Q ss_pred CC
Q 020756 226 KF 227 (321)
Q Consensus 226 ~~ 227 (321)
++
T Consensus 415 l~ 416 (706)
T 2z3z_A 415 II 416 (706)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 150
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.59 E-value=2.6e-14 Score=144.96 Aligned_cols=212 Identities=12% Similarity=0.101 Sum_probs=132.8
Q ss_pred CceEEEEEcCCcCCCCceeeeeccc-----CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFR-----CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP 78 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~-----~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~ 78 (321)
.+.|++|++.+ +++........ ....++.|||||++|++.... .+..-+.....+|++++.++....+.
T Consensus 35 ~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~---~~~~r~~~~~~~~~~d~~~~~~~~l~ 108 (740)
T 4a5s_A 35 ENNILVFNAEY---GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNY---VKQWRHSYTASYDIYDLNKRQLITEE 108 (740)
T ss_dssp TTEEEEEETTT---CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEE---EECSSSCEEEEEEEEETTTTEECCSS
T ss_pred CCcEEEEECCC---CceEEEEechhhhhhcccccceEECCCCCEEEEEECC---eeeEEEccceEEEEEECCCCcEEEcc
Confidence 46899999988 44432222111 112247999999999886432 11111112335778888776433332
Q ss_pred cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CC------------------cCeeeEEEcCCCCe
Q 020756 79 LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GS------------------GPYNTVRWNPKGKF 137 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~------------------~~~~~~~~sPdG~~ 137 (321)
.+.+.+..++|||||+.||++. +..|.+||+.+.....+ +. +....+.|||||+.
T Consensus 109 -~~~~~~~~~~~SPdG~~la~~~---~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~ 184 (740)
T 4a5s_A 109 -RIPNNTQWVTWSPVGHKLAYVW---NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF 184 (740)
T ss_dssp -CCCTTEEEEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE
T ss_pred -cCCCcceeeEECCCCCEEEEEE---CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCE
Confidence 3567899999999999999973 46899999966544444 11 11134899999999
Q ss_pred EEEEccCC---------------------------------CCCcEEEEECCC---C---eEEEeee------C-CCeee
Q 020756 138 LCLAGFGN---------------------------------LPGDMAFWDYVD---G---KQLGTTR------A-ECSVT 171 (321)
Q Consensus 138 l~~~g~~n---------------------------------~~g~i~iwD~~~---~---~~i~~~~------~-~~~~~ 171 (321)
|++..+.. ....|++||+.+ + +...... + ..+..
T Consensus 185 la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (740)
T 4a5s_A 185 LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCD 264 (740)
T ss_dssp EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEE
T ss_pred EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEE
Confidence 99975211 112688999988 7 3333221 1 25778
Q ss_pred EEEccCCCEEEEEEcCCceeecCcEEEEeecCce-------eE----EeccCce-----EEEEEecCCCCCC
Q 020756 172 SEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSL-------FF----KKMFDKL-----FQAEWKPVSPDKF 227 (321)
Q Consensus 172 ~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~-------l~----~~~~~~~-----~~~~w~P~~~~~~ 227 (321)
++|||||+.++..... ...+..|.+||+.+.. +. ..+...+ ..+.|+|++..++
T Consensus 265 ~~wspdg~~~~~~~~r--~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 265 VTWATQERISLQWLRR--IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp EEEEETTEEEEEEEES--STTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred EEEeCCCeEEEEEeCC--CCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 9999999987766531 1123368899985422 11 2233222 3678999988655
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.59 E-value=2.2e-15 Score=151.56 Aligned_cols=182 Identities=13% Similarity=0.133 Sum_probs=122.0
Q ss_pred CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC---CCeEEEEECcCCCEEEEEEcc--
Q 020756 29 CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE---GPVHDVQWSYSGSEFAVVYGF-- 103 (321)
Q Consensus 29 ~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~---~~v~~~~wsP~g~~l~~~~g~-- 103 (321)
.....+.|+|+|+++ +.. . ...|++++..++....+.-.+. ..+.+++|||||++|++....
T Consensus 16 ~~~~~~~~s~dg~~~-~~~---~---------d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~ 82 (719)
T 1z68_A 16 YKTFFPNWISGQEYL-HQS---A---------DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSK 82 (719)
T ss_dssp CCCCCCEESSSSEEE-EEC---T---------TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEE
T ss_pred CCCCccEECCCCeEE-EEc---C---------CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCce
Confidence 345688999999533 321 1 1247888887764444332221 248899999999999987541
Q ss_pred -----CCCeEEEEeCCCcee---EEeCCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee-CC-C-e---
Q 020756 104 -----MPASATIFNKKCRPI---LELGSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR-AE-C-S--- 169 (321)
Q Consensus 104 -----~~~~i~i~d~~~~~~---~~~~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~-~~-~-~--- 169 (321)
.++.+.+||+.+... ..+ ...+..+.|||||+.|+++. +++|++||+.+++...... .+ . +
T Consensus 83 ~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~----~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 83 LWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY----QNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp CSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred eEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE----CCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 257899999976655 344 25688899999999999984 4799999998886544321 11 1 1
Q ss_pred --------------eeEEEccCCCEEEEEEcCCc-e---------------------------eecCcEEEEeecCceeE
Q 020756 170 --------------VTSEWSPDGRYFMTATTAPR-L---------------------------QIDNGIKIFHHNGSLFF 207 (321)
Q Consensus 170 --------------~~~~wSpdG~~l~t~~s~~r-l---------------------------~~d~~v~iw~~~g~~l~ 207 (321)
..+.|||||++|++++.... . ..+..+++||+.+....
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~ 237 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV 237 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence 37999999999999874100 0 01127889999765321
Q ss_pred ---E--------eccCceEEEEEecCCCCCCC
Q 020756 208 ---K--------KMFDKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 208 ---~--------~~~~~~~~~~w~P~~~~~~~ 228 (321)
. .+...+..+.|+|+...++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 238 GPQEVPVPAMIASSDYYFSWLTWVTDERVCLQ 269 (719)
T ss_dssp CCEECCCCHHHHTSCEEEEEEEESSSSEEEEE
T ss_pred ceeEccCCccCCCCcceEEEeEEeCCCeEEEE
Confidence 1 23446789999999654443
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.58 E-value=8.3e-15 Score=147.40 Aligned_cols=212 Identities=14% Similarity=0.118 Sum_probs=133.2
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccC---ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceee-ee
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRC---STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGL-VP 78 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~---~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~-v~ 78 (321)
..+.|++|++.. +++......... ....+.|||||++|++..... .. -.+.+...|+++++.++.... ..
T Consensus 34 ~d~~i~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~-~~--~~~s~~~~i~~~d~~~g~~~~~~~ 107 (719)
T 1z68_A 34 ADNNIVLYNIET---GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYS-KL--WRYSYTATYYIYDLSNGEFVRGNE 107 (719)
T ss_dssp TTSCEEEEESSS---CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEE-EC--SSSCEEEEEEEEETTTTEECCSSC
T ss_pred CCCCEEEEEcCC---CcEEEEEccccccccceeeEEECCCCCeEEEEecCc-ee--EEeecceEEEEEECCCCcccccee
Confidence 357899999988 554332222211 367899999999998864321 00 001123468888887763300 22
Q ss_pred cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---C-Cc-----------------CeeeEEEcCCCCe
Q 020756 79 LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---G-SG-----------------PYNTVRWNPKGKF 137 (321)
Q Consensus 79 l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~-~~-----------------~~~~~~~sPdG~~ 137 (321)
+ ...+.+++|||||+.|+++. ++.|.+||+.+.....+ + .. ....+.|||||++
T Consensus 108 l--~~~~~~~~~SPDG~~la~~~---~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~ 182 (719)
T 1z68_A 108 L--PRPIQYLCWSPVGSKLAYVY---QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF 182 (719)
T ss_dssp C--CSSBCCEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE
T ss_pred c--CcccccceECCCCCEEEEEE---CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE
Confidence 2 25688999999999999863 56999999965444433 1 11 1148999999999
Q ss_pred EEEEccCC-------------------------------CCCcEEEEECCCCeEE---Ee-----eeCC--CeeeEEEcc
Q 020756 138 LCLAGFGN-------------------------------LPGDMAFWDYVDGKQL---GT-----TRAE--CSVTSEWSP 176 (321)
Q Consensus 138 l~~~g~~n-------------------------------~~g~i~iwD~~~~~~i---~~-----~~~~--~~~~~~wSp 176 (321)
|++++..+ ....|++||+.+++.+ .. +..+ .+..++|||
T Consensus 183 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp 262 (719)
T 1z68_A 183 LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT 262 (719)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS
T ss_pred EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC
Confidence 99987321 1127899999887642 11 1123 567899999
Q ss_pred CCCEEEEEEcCCceeecCcEEEEe----ecCc-ee--E----EeccCceE-----EEEEecCCCCCC
Q 020756 177 DGRYFMTATTAPRLQIDNGIKIFH----HNGS-LF--F----KKMFDKLF-----QAEWKPVSPDKF 227 (321)
Q Consensus 177 dG~~l~t~~s~~rl~~d~~v~iw~----~~g~-~l--~----~~~~~~~~-----~~~w~P~~~~~~ 227 (321)
||+++++.... ......|.+|| ..+. .. . ..+...+. .+.|+|++..++
T Consensus 263 D~~~~~~~~~~--~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 327 (719)
T 1z68_A 263 DERVCLQWLKR--VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYY 327 (719)
T ss_dssp SSEEEEEEEES--STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEE
T ss_pred CCeEEEEEecc--ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEE
Confidence 98877765431 00113477888 6433 22 2 23344454 789999988654
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.58 E-value=3.3e-14 Score=139.76 Aligned_cols=195 Identities=13% Similarity=0.038 Sum_probs=128.4
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGP 84 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~ 84 (321)
...+||.+.....+... +...+.. ...+.|+|+|+.+++....+ +...|| ++.++....+.- +..
T Consensus 88 ~~~~l~~~~~~~~g~~~-~l~~~~~-~~~~~~s~dg~~~~~~s~~~---------~~~~l~--d~~~g~~~~l~~-~~~- 152 (582)
T 3o4h_A 88 EQHALFKVNTSRPGEEQ-RLEAVKP-MRILSGVDTGEAVVFTGATE---------DRVALY--ALDGGGLRELAR-LPG- 152 (582)
T ss_dssp CCEEEEEEETTSTTCCE-ECTTSCS-BEEEEEEECSSCEEEEEECS---------SCEEEE--EEETTEEEEEEE-ESS-
T ss_pred cceEEEEEeccCCCccc-cccCCCC-ceeeeeCCCCCeEEEEecCC---------CCceEE--EccCCcEEEeec-CCC-
Confidence 34577776651112332 3333332 33669999999887764321 111244 444443334332 222
Q ss_pred eEEEEECcCCCEEEEEEcc--CCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCC--cEEEEECCCC
Q 020756 85 VHDVQWSYSGSEFAVVYGF--MPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPG--DMAFWDYVDG 158 (321)
Q Consensus 85 v~~~~wsP~g~~l~~~~g~--~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g--~i~iwD~~~~ 158 (321)
.++.|||||+.|++.... ....|.+||+.+.....+ +...+..+.|||||++|+.+. .++ .|++||++++
T Consensus 153 -~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~---~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 153 -FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLE---TAREARLVTVDPRDG 228 (582)
T ss_dssp -CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEE---CSSCEEEEEECTTTC
T ss_pred -ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEcc---CCCeeEEEEEcCCCC
Confidence 899999999999976432 115799999876655566 556789999999999999665 566 8999999988
Q ss_pred eEEEeeeCC--CeeeEE--------EccCCCEEEEEEcCCceeecCcEEEEeecCceeEEeccCceEEEEEecCCCCCCC
Q 020756 159 KQLGTTRAE--CSVTSE--------WSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKKMFDKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 159 ~~i~~~~~~--~~~~~~--------wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~~~~~~~~~~w~P~~~~~~~ 228 (321)
+.. .+..+ .+..+. |||||..++++. .++.++||++ |+.+. .....+..++|+ +...++.
T Consensus 229 ~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~------~~g~~~l~~~-g~~~~-~~~~~v~~~~~s-dg~~l~~ 298 (582)
T 3o4h_A 229 SVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVAR------REGRSAVFID-GERVE-APQGNHGRVVLW-RGKLVTS 298 (582)
T ss_dssp CEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEE------ETTEEEEEET-TEEEC-CCSSEEEEEEEE-TTEEEEE
T ss_pred cEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEE------cCCcEEEEEE-CCeec-cCCCceEEEEec-CCEEEEE
Confidence 776 55444 344456 999997666666 4899999999 76653 333567788888 6655543
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.56 E-value=7.3e-13 Score=120.15 Aligned_cols=199 Identities=12% Similarity=0.075 Sum_probs=135.3
Q ss_pred CCceEEEEEcCCcCCCCceeeeeccc-CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-eeeecC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFR-CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE-GLVPLR 80 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~-~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~-~~v~l~ 80 (321)
..+.|.+|++.+ ++.+....... .....+.|+|+|+.+++... +...|+.++...... ..+.+.
T Consensus 19 ~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~-----------~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 19 YPNNLHVVDVAS---DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN-----------HYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp TTTEEEEEETTT---TEEEEEEECSSCCSSCEEEECTTSSEEEEEET-----------TTTEEEEEETTTTEEEEEEESC
T ss_pred CCCeEEEEECCC---CcEEEEEecCCCCCCceeEECCCCCEEEEEeC-----------CCCcEEEEeCCCCcEEEEEEcc
Confidence 467899999988 66665555432 14678999999998877531 123477787765422 233333
Q ss_pred C-----CCCeEEEEECcCCCEEEEEEcc----------CCCeEEEEeCCCc----eeEEe-CCcCeeeEEEcCCCCeEEE
Q 020756 81 K-----EGPVHDVQWSYSGSEFAVVYGF----------MPASATIFNKKCR----PILEL-GSGPYNTVRWNPKGKFLCL 140 (321)
Q Consensus 81 ~-----~~~v~~~~wsP~g~~l~~~~g~----------~~~~i~i~d~~~~----~~~~~-~~~~~~~~~~sPdG~~l~~ 140 (321)
+ ...+++++|+|||++|++.... .++.+.+||+... .+..+ +...+.++.|+|||+ |++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEE
Confidence 2 1237899999999999886421 1369999998642 23333 344678899999999 555
Q ss_pred EccCCCCCcEEEEECCCCeEEEeeeCC-----------------------------------------------------
Q 020756 141 AGFGNLPGDMAFWDYVDGKQLGTTRAE----------------------------------------------------- 167 (321)
Q Consensus 141 ~g~~n~~g~i~iwD~~~~~~i~~~~~~----------------------------------------------------- 167 (321)
++ +.|.+||+.+++.+..+...
T Consensus 164 ~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 164 AG-----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp ES-----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred cc-----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 54 35999999988776654322
Q ss_pred -----------------CeeeEEEcc-CCCEEEEEEcCCceeecCcEEEEeec-CceeEEe-ccCceEEEEEecCCCCCC
Q 020756 168 -----------------CSVTSEWSP-DGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFKK-MFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 168 -----------------~~~~~~wSp-dG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~~-~~~~~~~~~w~P~~~~~~ 227 (321)
....++||| ||++|+++ ++.+.+||+. ++.+... ....+..+.|+|++..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 310 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--------LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLY 310 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--------ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEE
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE--------cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEE
Confidence 123467789 99998877 4689999985 4444332 234577899999988877
Q ss_pred CC
Q 020756 228 GD 229 (321)
Q Consensus 228 ~~ 229 (321)
..
T Consensus 311 ~~ 312 (349)
T 1jmx_B 311 LG 312 (349)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.55 E-value=1e-12 Score=120.08 Aligned_cols=204 Identities=11% Similarity=0.099 Sum_probs=129.7
Q ss_pred CceEEEEEcCCcCCCCceeeeec--ccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee--c
Q 020756 4 PASVQIYACGKDLQSQPLARRSF--FRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP--L 79 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~--f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~--l 79 (321)
...|.||.+... ...+..... .......+.|+|+|+ |++..... +...|+.+++.++....+. .
T Consensus 15 ~~~i~v~~~d~~--tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~---------~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 15 SQGIYQGTLDTT--AKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKED---------DEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp CCEEEEEEEETT--TTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEET---------TEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEEcCC--CCeEEEeeeeeccCCcceEEEccCCe-EEEEEecC---------CCceEEEEEecCCcEEEeeeee
Confidence 456888888752 222322222 124556799999999 66543210 1223566665444322222 1
Q ss_pred CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC----ceeEEe-C--Cc--------CeeeEEEcCCCCeEEEEccC
Q 020756 80 RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC----RPILEL-G--SG--------PYNTVRWNPKGKFLCLAGFG 144 (321)
Q Consensus 80 ~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~----~~~~~~-~--~~--------~~~~~~~sPdG~~l~~~g~~ 144 (321)
.+...+..++|+|||+.|+++ +..++.+.+||+.. ..+..+ . .+ .+..+.|+|||+ |++++.
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~-~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~- 159 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSA-NYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL- 159 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEE-ETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET-
T ss_pred cCCCCCEEEEECCCCCEEEEE-eCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC-
Confidence 245678899999999998886 34578999999842 223333 1 11 367899999999 555542
Q ss_pred CCCCcEEEEECC-CCeEE--EeeeC---CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec---Ccee--EEec--c
Q 020756 145 NLPGDMAFWDYV-DGKQL--GTTRA---ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN---GSLF--FKKM--F 211 (321)
Q Consensus 145 n~~g~i~iwD~~-~~~~i--~~~~~---~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~---g~~l--~~~~--~ 211 (321)
.++.|.+||+. +++.. ..+.. .....++|+|||++|+++.. .++.+.+|+++ |.+. .... .
T Consensus 160 -~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-----~~~~v~v~~~~~~~g~~~~~~~~~~~~ 233 (347)
T 3hfq_A 160 -GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE-----LSSQIASLKYDTQTGAFTQLGIVKTIP 233 (347)
T ss_dssp -TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-----TTTEEEEEEEETTTTEEEEEEEEESSC
T ss_pred -CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC-----CCCEEEEEEecCCCCceEEeeeeeecC
Confidence 45789999998 55432 22222 25677999999998888765 37889999986 3432 1111 1
Q ss_pred ------CceEEEEEecCCCCCCC
Q 020756 212 ------DKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 212 ------~~~~~~~w~P~~~~~~~ 228 (321)
..+..+.|+|++..+|-
T Consensus 234 ~~~~~~~~~~~i~~spdG~~l~v 256 (347)
T 3hfq_A 234 ADYTAHNGAAAIRLSHDGHFLYV 256 (347)
T ss_dssp TTCCSCCEEEEEEECTTSCEEEE
T ss_pred CCCCCCCcceeEEECCCCCEEEE
Confidence 24778999999987764
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=1.3e-12 Score=120.28 Aligned_cols=206 Identities=18% Similarity=0.226 Sum_probs=128.1
Q ss_pred CCceEEEEEcCCcCCCCceeeee---cccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceee---
Q 020756 3 SPASVQIYACGKDLQSQPLARRS---FFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGL--- 76 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~---~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~--- 76 (321)
..+.|.+|++... ...+.... ......+.+.+ +|++|++.... + +...+|.+...+.....
T Consensus 73 ~~~~v~~~~~~~~--~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~-----~----~~v~~~~~~~~g~~~~~~~~ 139 (361)
T 3scy_A 73 DQAAVSAFAFDKE--KGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYS-----G----GSITVFPIGQDGALLPASDV 139 (361)
T ss_dssp TTCEEEEEEEETT--TTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETT-----T----TEEEEEEBCTTSCBCSCSEE
T ss_pred CCCcEEEEEEeCC--CCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECC-----C----CEEEEEEeCCCCcCccccee
Confidence 3578999999762 12222222 22345566677 88887764210 0 22233433333321111
Q ss_pred eecC---------CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCce---------------eEEe-CCcCeeeEEE
Q 020756 77 VPLR---------KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRP---------------ILEL-GSGPYNTVRW 131 (321)
Q Consensus 77 v~l~---------~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~---------------~~~~-~~~~~~~~~~ 131 (321)
+... +...+++++|+|+|++++++ +..+..+.+|++.... ...+ .......+.|
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 218 (361)
T 3scy_A 140 IEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD-DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIF 218 (361)
T ss_dssp EECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE-ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEE
T ss_pred EEccCCCCCccccCCCcceEEEECCCCCEEEEE-eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEE
Confidence 1111 12345889999999988776 3446799999874221 1222 3445678999
Q ss_pred cCCCCeEEEEccCCCCCcEEEEECCCCeE--EEeeeCC-----CeeeEEEccCCCEEEEEEcCCceee-cCcEEEEeec-
Q 020756 132 NPKGKFLCLAGFGNLPGDMAFWDYVDGKQ--LGTTRAE-----CSVTSEWSPDGRYFMTATTAPRLQI-DNGIKIFHHN- 202 (321)
Q Consensus 132 sPdG~~l~~~g~~n~~g~i~iwD~~~~~~--i~~~~~~-----~~~~~~wSpdG~~l~t~~s~~rl~~-d~~v~iw~~~- 202 (321)
+|||++|++++. .++.|.+||+.+++. +..+... ....++|||||++|+++.. . ++.+.||+++
T Consensus 219 spdg~~l~v~~~--~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~-----~~~~~i~v~~~~~ 291 (361)
T 3scy_A 219 NSDGKFAYLINE--IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR-----LKADGVAIFKVDE 291 (361)
T ss_dssp CTTSSEEEEEET--TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC-----SSSCEEEEEEECT
T ss_pred cCCCCEEEEEcC--CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC-----CCCCEEEEEEEcC
Confidence 999999888762 468999999987754 3333221 3568999999999987774 3 4789999995
Q ss_pred --Ccee--EEe-ccCceEEEEEecCCCCCCCC
Q 020756 203 --GSLF--FKK-MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 203 --g~~l--~~~-~~~~~~~~~w~P~~~~~~~~ 229 (321)
|.+. ... ....+..++|+|++..++..
T Consensus 292 ~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~ 323 (361)
T 3scy_A 292 TNGTLTKVGYQLTGIHPRNFIITPNGKYLLVA 323 (361)
T ss_dssp TTCCEEEEEEEECSSCCCEEEECTTSCEEEEE
T ss_pred CCCcEEEeeEecCCCCCceEEECCCCCEEEEE
Confidence 4532 211 12367789999999877754
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.54 E-value=1.7e-13 Score=138.97 Aligned_cols=181 Identities=14% Similarity=0.160 Sum_probs=119.4
Q ss_pred cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC-----CCeEEEEECcCCCEEEEEEc
Q 020756 28 RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE-----GPVHDVQWSYSGSEFAVVYG 102 (321)
Q Consensus 28 ~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~-----~~v~~~~wsP~g~~l~~~~g 102 (321)
......+.|+|+|++++.. + | .|++++..++....+.-.+. ....++.|||||++|++.+.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~---~---------~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~ 81 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ---E---------N--NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYN 81 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE---T---------T--EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEE
T ss_pred cccccccEECCCCcEEEEc---C---------C--cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEEC
Confidence 4456689999999766541 1 2 36777776654333322222 12356899999999998754
Q ss_pred cCC-------CeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee-CC-C-e-
Q 020756 103 FMP-------ASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR-AE-C-S- 169 (321)
Q Consensus 103 ~~~-------~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~-~~-~-~- 169 (321)
... +.+.+||+.+.....+ +...+..+.|||||+.|+++. +++|++||+.+++...... +. . +
T Consensus 82 ~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~~~~~~~~~lt~~g~~~~~~ 157 (740)
T 4a5s_A 82 YVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW----NNDIYVKIEPNLPSYRITWTGKEDIIY 157 (740)
T ss_dssp EEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred CeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE----CCeEEEEECCCCceEEEcCCCCcccee
Confidence 211 5678999987766555 456789999999999999984 4799999998876443221 11 1 2
Q ss_pred ----------------eeEEEccCCCEEEEEEcCCc-------------------e-----------eecCcEEEEeecC
Q 020756 170 ----------------VTSEWSPDGRYFMTATTAPR-------------------L-----------QIDNGIKIFHHNG 203 (321)
Q Consensus 170 ----------------~~~~wSpdG~~l~t~~s~~r-------------------l-----------~~d~~v~iw~~~g 203 (321)
..+.|||||++|++++.... . .....++|||+.+
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~ 237 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDS 237 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTS
T ss_pred cCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCC
Confidence 23889999999999863110 0 0011588899876
Q ss_pred ---c---eeEEe--------ccCceEEEEEecCCCCC
Q 020756 204 ---S---LFFKK--------MFDKLFQAEWKPVSPDK 226 (321)
Q Consensus 204 ---~---~l~~~--------~~~~~~~~~w~P~~~~~ 226 (321)
. ..... +...+..++|+|++..+
T Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~ 274 (740)
T 4a5s_A 238 LSSVTNATSIQITAPASMLIGDHYLCDVTWATQERIS 274 (740)
T ss_dssp CCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEE
T ss_pred CCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEE
Confidence 4 22222 33458899999998743
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.52 E-value=5.6e-12 Score=113.54 Aligned_cols=182 Identities=9% Similarity=0.038 Sum_probs=124.8
Q ss_pred CceEEEEEcCCcCCCCceeeeeccc-----CccceEEeCCCCCeeEEEEEecccCCCceee--cceeEEEEEcCCCceee
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFR-----CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYY--GESKLNYLTTDGTHEGL 76 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~-----~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~--g~~~l~~l~~~g~~~~~ 76 (321)
.+.|.+|++.+ ++.+....+.. .....+.|+|+|++|++...... .+...+ ....|+.++..+.. ..
T Consensus 55 ~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~--~~~~~~~~~~~~i~v~d~~~~~-~~ 128 (337)
T 1pby_B 55 SESLVKIDLVT---GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVR--LELTHFEVQPTRVALYDAETLS-RR 128 (337)
T ss_dssp TTEEEEEETTT---CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEE--ECSSCEEECCCEEEEEETTTTE-EE
T ss_pred CCeEEEEECCC---CCeEeeEEcCCcccccccccceEECCCCCEEEEEecccc--cccccccccCceEEEEECCCCc-EE
Confidence 46899999987 56665554321 15668999999999887632100 001111 23457788876542 22
Q ss_pred eecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe--C-------------------------------
Q 020756 77 VPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL--G------------------------------- 122 (321)
Q Consensus 77 v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~--~------------------------------- 122 (321)
..+.....+.+++|+|+|++|++. ++.+.+||+... .+..+ +
T Consensus 129 ~~~~~~~~~~~~~~s~dg~~l~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 204 (337)
T 1pby_B 129 KAFEAPRQITMLAWARDGSKLYGL----GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYT 204 (337)
T ss_dssp EEEECCSSCCCEEECTTSSCEEEE----SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEE
T ss_pred EEEeCCCCcceeEECCCCCEEEEe----CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeec
Confidence 223334567889999999988885 357888887432 22222 1
Q ss_pred -----------------------------------CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC
Q 020756 123 -----------------------------------SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE 167 (321)
Q Consensus 123 -----------------------------------~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~ 167 (321)
......+.|+|||++|+++. +.|.+||+.+++.+..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-----~~v~~~d~~~~~~~~~~~~~ 279 (337)
T 1pby_B 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAY-----NVLESFDLEKNASIKRVPLP 279 (337)
T ss_dssp EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEE-----SEEEEEETTTTEEEEEEECS
T ss_pred cccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEeC-----CeEEEEECCCCcCcceecCC
Confidence 11234589999999998873 79999999999888777654
Q ss_pred -CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee
Q 020756 168 -CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF 206 (321)
Q Consensus 168 -~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l 206 (321)
.+..++|+|||++|+++. .++.+.+||+. ++.+
T Consensus 280 ~~~~~~~~s~dg~~l~~~~------~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLGG------ALGDLAAYDAETLEKK 314 (337)
T ss_dssp SCCCEEEECTTSCEEEEES------BSSEEEEEETTTCCEE
T ss_pred CceeeEEECCCCCEEEEEc------CCCcEEEEECcCCcEE
Confidence 678899999999999875 48999999985 4444
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.52 E-value=7.3e-13 Score=139.23 Aligned_cols=195 Identities=9% Similarity=-0.007 Sum_probs=135.1
Q ss_pred ceEEEEEcCCcCCCCceeeeecccC-ccceEEeCCCCCeeEEEEEecccCCCceeecceeEE-EEEcCCCceeeeecCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRC-STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLN-YLTTDGTHEGLVPLRKE 82 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~-~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~-~l~~~g~~~~~v~l~~~ 82 (321)
+.|.+|++.. +. ......... ....+.|+ +|+.|++... ...++ +++..+.....+. .+.
T Consensus 317 ~~i~~~~~~~---~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~------------~~~l~~~~d~~~~~~~~l~-~~~ 378 (1045)
T 1k32_A 317 GQAFIQDVSG---TY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTR------------EGDFLGIYDYRTGKAEKFE-ENL 378 (1045)
T ss_dssp TEEEEECTTS---SB-EEECSCCSCEEEEEECSS-SEEEEEEEET------------TEEEEEEEETTTCCEEECC-CCC
T ss_pred CEEEEEcCCC---Cc-eEEccCCCcceEEeeeEc-CCCeEEEEEC------------CCceEEEEECCCCCceEec-CCc
Confidence 4566776655 33 223333333 56688999 9999887631 23577 7777776445554 667
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccC-------CCCCcEEE
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFG-------NLPGDMAF 152 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~-------n~~g~i~i 152 (321)
..+..++|||||+.|++. ..++.+.+||+.+.....+ +...+..+.|||||++|++++.. +.++.|++
T Consensus 379 ~~~~~~~~SpDG~~la~~--~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVA--NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp CSEEEEEECTTSSEEEEE--ETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred cceeeeEECCCCCEEEEE--CCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence 889999999999999986 4567999999965543332 56778999999999999988631 12358999
Q ss_pred EECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEeccCceEEEEEecCCCCC
Q 020756 153 WDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKKMFDKLFQAEWKPVSPDK 226 (321)
Q Consensus 153 wD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~~~~~~~~~~w~P~~~~~ 226 (321)
||+.+++ +..+..+ .+..+.|||||++|++++. ++...+|+.....+...+...++.+.++++....
T Consensus 457 ~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (1045)
T 1k32_A 457 YDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY------RSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNP 525 (1045)
T ss_dssp EETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES------CCCCCEECSSSSCEECCSCBEEEEEESSTTCCCG
T ss_pred EECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec------ccCCcCcchhccccccccCceeEEEEeCCCCCCc
Confidence 9999887 4444443 5677999999999999884 6777888764333322233456666666655443
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=4.3e-13 Score=124.13 Aligned_cols=182 Identities=9% Similarity=0.051 Sum_probs=114.3
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCC-
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKE- 82 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~- 82 (321)
..|.+|++.. ++ +............+.||| +|+.|++..... .. .+...||.++..+.....+.-...
T Consensus 168 ~~l~~~d~~~---g~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~----~~--~~~~~l~~~d~~~~~~~~l~~~~~~ 237 (388)
T 3pe7_A 168 CRLMRVDLKT---GE-STVILQENQWLGHPIYRPYDDSTVAFCHEGP----HD--LVDARMWLINEDGTNMRKVKTHAEG 237 (388)
T ss_dssp EEEEEEETTT---CC-EEEEEEESSCEEEEEEETTEEEEEEEEECSC----TT--TSSCSEEEEETTSCCCEESCCCCTT
T ss_pred ceEEEEECCC---Cc-eEEeecCCccccccEECCCCCCEEEEEEecC----CC--CCcceEEEEeCCCCceEEeeeCCCC
Confidence 6677888776 33 333333344567899999 999998874311 00 023358899887764444432222
Q ss_pred CCeEEEEECcCCCEEEEEEccCCC---eEEEEeCCCceeEEe---CC-----cCeeeEEEcCCCCeEEEEccC------C
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPA---SATIFNKKCRPILEL---GS-----GPYNTVRWNPKGKFLCLAGFG------N 145 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~---~i~i~d~~~~~~~~~---~~-----~~~~~~~~sPdG~~l~~~g~~------n 145 (321)
..+..+.|||||+.|+++...... .|.+||+.+.....+ .. .....+.|||||+.|++.... .
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------C
T ss_pred cccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 257889999999988776432222 499999976543333 21 012224799999999875321 2
Q ss_pred CCCcEEEEECCCCeEEEeeeCCC------------eeeEEEccCCCEEEEEEcCCceeecCcEEEEee
Q 020756 146 LPGDMAFWDYVDGKQLGTTRAEC------------SVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 146 ~~g~i~iwD~~~~~~i~~~~~~~------------~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
.+..|++||+.+++......... +..++|||||++|++++.. ++...||.+
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-----~g~~~l~~~ 380 (388)
T 3pe7_A 318 NDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-----HGKPALYLA 380 (388)
T ss_dssp CCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-----TSSCEEEEE
T ss_pred CCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC-----CCceeEEEE
Confidence 45789999999886544333322 6778999999999998852 555666654
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.51 E-value=1.9e-12 Score=119.91 Aligned_cols=211 Identities=10% Similarity=0.029 Sum_probs=128.8
Q ss_pred eEEEEEcC-CcCCCCceeeeecc-cCccceEEeCCCCCeeEEEEEecccCCCcee-------ecceeEEEEEcCCCceee
Q 020756 6 SVQIYACG-KDLQSQPLARRSFF-RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSY-------YGESKLNYLTTDGTHEGL 76 (321)
Q Consensus 6 ~v~v~~~~-~~~~~~~i~~~~~f-~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~-------~g~~~l~~l~~~g~~~~~ 76 (321)
.|.+|++. . ++.+.....- ......+.|+|+|++|++.+.. .. +-..| .|...+|.++.+|.....
T Consensus 61 ~v~~~~~~~~---g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~-~~-~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~ 135 (365)
T 1jof_A 61 KWSSFAVKSP---TEIVHEASHPIGGHPRANDADTNTRAIFLLAAK-QP-PYAVYANPFYKFAGYGNVFSVSETGKLEKN 135 (365)
T ss_dssp EEEEEEEEET---TEEEEEEEEECCSSGGGGCTTSCCEEEEEEECS-ST-TCCEEEEEESSSCCEEEEEEECTTCCEEEE
T ss_pred eEEEEEECCC---CCEEEeeEeecCCCCccEEECCCCCEEEEEEec-CC-cceeccceeecCCceEEEEccCCCCcCcce
Confidence 68999986 4 4433222211 1235678999999975443211 00 00001 133345555444543333
Q ss_pred eec---CCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-Ccee---EEe----CCcCeeeEEEcCCCCeEEEEccCC
Q 020756 77 VPL---RKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPI---LEL----GSGPYNTVRWNPKGKFLCLAGFGN 145 (321)
Q Consensus 77 v~l---~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~---~~~----~~~~~~~~~~sPdG~~l~~~g~~n 145 (321)
+.. .+...+++++|+|||++++++. ..+..|.+||+. ...+ ..+ +......+.|+|||++|++++.
T Consensus 136 ~~~~~~~~~~~~~~~~~spdG~~l~~~~-~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-- 212 (365)
T 1jof_A 136 VQNYEYQENTGIHGMVFDPTETYLYSAD-LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME-- 212 (365)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET--
T ss_pred EeeEEeCCCCcceEEEECCCCCEEEEEc-CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC--
Confidence 332 2456799999999999887753 335699999986 3322 223 1345788999999999988762
Q ss_pred CCCcEEEEECC--CCeEE------EeeeCC------------CeeeEE-EccCCCEEEEEEcCCceeecC-----cEEEE
Q 020756 146 LPGDMAFWDYV--DGKQL------GTTRAE------------CSVTSE-WSPDGRYFMTATTAPRLQIDN-----GIKIF 199 (321)
Q Consensus 146 ~~g~i~iwD~~--~~~~i------~~~~~~------------~~~~~~-wSpdG~~l~t~~s~~rl~~d~-----~v~iw 199 (321)
.++.|.+|+++ +++.. ..+... .+..++ |||||++|+++.. .++ .+.+|
T Consensus 213 ~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~-----~~~~~~~~~i~v~ 287 (365)
T 1jof_A 213 AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR-----ANKFELQGYIAGF 287 (365)
T ss_dssp TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE-----ESSTTSCCEEEEE
T ss_pred CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC-----CCCCCCCCeEEEE
Confidence 45789999765 55532 222111 266799 9999999987663 234 79999
Q ss_pred eec--CceeE---Ee--ccCceEEEEEec---CCCCCCCC
Q 020756 200 HHN--GSLFF---KK--MFDKLFQAEWKP---VSPDKFGD 229 (321)
Q Consensus 200 ~~~--g~~l~---~~--~~~~~~~~~w~P---~~~~~~~~ 229 (321)
+++ |++.. .. .......+.|+| ++..++..
T Consensus 288 ~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~ 327 (365)
T 1jof_A 288 KLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT 327 (365)
T ss_dssp EECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred EECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEE
Confidence 984 55432 11 223456788999 67777654
No 162
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.50 E-value=5.8e-13 Score=127.10 Aligned_cols=160 Identities=15% Similarity=0.173 Sum_probs=109.4
Q ss_pred CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-----ce------eeeecCCCCCeEEEEECcC-CCE
Q 020756 29 CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-----HE------GLVPLRKEGPVHDVQWSYS-GSE 96 (321)
Q Consensus 29 ~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-----~~------~~v~l~~~~~v~~~~wsP~-g~~ 96 (321)
.....+.|+|+|++|++...+. +..+. +.++++... .. ..+...|.+.|.+++|+|+ +..
T Consensus 93 ~~v~~l~~spdg~~lav~~~sg------s~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSS------EYGSI--IAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM 164 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEET------TTEEE--EEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE
T ss_pred CcccEEEEcCCCCEEEEEEecc------CCCce--EEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE
Confidence 4578899999999998742110 11122 444443221 00 1122236889999999998 777
Q ss_pred EEEEEccCCCeEEEEeCCCc-eeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC------
Q 020756 97 FAVVYGFMPASATIFNKKCR-PILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE------ 167 (321)
Q Consensus 97 l~~~~g~~~~~i~i~d~~~~-~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~------ 167 (321)
|+++ ..|+.+++||++.. .+... |...+.+++|||+|++|++++ .+|.|.+||++ ++....+..+
T Consensus 165 las~--s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs---~dg~v~iwd~~-~~~~~~~~~~~~~~~~ 238 (434)
T 2oit_A 165 VAVC--LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK---QNGTVVQYLPT-LQEKKVIPCPPFYESD 238 (434)
T ss_dssp EEEE--ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE---TTSCEEEECTT-CCEEEEECCCTTCCTT
T ss_pred EEEE--ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc---CCCcEEEEccC-CcccccccCCcccCCC
Confidence 8775 66899999999754 22222 577899999999999999999 89999999998 5444433321
Q ss_pred ---CeeeEEEccCCCEEEEEEcC-CceeecCcEEEEeec
Q 020756 168 ---CSVTSEWSPDGRYFMTATTA-PRLQIDNGIKIFHHN 202 (321)
Q Consensus 168 ---~~~~~~wSpdG~~l~t~~s~-~rl~~d~~v~iw~~~ 202 (321)
.+..++|++++.++++..+. .++.....+++|++.
T Consensus 239 ~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 239 HPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp SCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred CceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 56789999999998776642 111122358999985
No 163
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.49 E-value=2.5e-13 Score=125.57 Aligned_cols=200 Identities=13% Similarity=0.026 Sum_probs=126.0
Q ss_pred CCceeeeecccCc-----cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECc
Q 020756 18 SQPLARRSFFRCS-----TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSY 92 (321)
Q Consensus 18 ~~~i~~~~~f~~~-----~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP 92 (321)
++.+.+.+..... ...+.|||+|++|++.... .|...||.++..+.....+..........+.|||
T Consensus 20 g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~---------~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp 90 (396)
T 3c5m_A 20 QVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDF---------DGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST 90 (396)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT---------TSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT
T ss_pred CcceEEEecCCCCccceeeecCcCCCCCCEEEEEEec---------CCCceEEEEECCCCcEEEeecCCCCccccceECC
Confidence 5556555543222 5678999999999887432 1334588888877644444322222233488999
Q ss_pred CCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeee-------------------EEEcCCCCeEEEEc--cCCCCC
Q 020756 93 SGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNT-------------------VRWNPKGKFLCLAG--FGNLPG 148 (321)
Q Consensus 93 ~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~-------------------~~~sPdG~~l~~~g--~~n~~g 148 (321)
||+.|+++. .+..+.+||+.+.....+ +...... +.|+|+|+.+++.. ..+.+.
T Consensus 91 dg~~l~~~~--~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~ 168 (396)
T 3c5m_A 91 DERAFFYVK--NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTC 168 (396)
T ss_dssp TSSEEEEEE--TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCE
T ss_pred CCCEEEEEE--cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcc
Confidence 999998874 345899999966533332 2221111 35677777766543 112457
Q ss_pred cEEEEECCCCeEEEeeeCC-CeeeEEEcc-CCCEEEEEEcCCceeecCcEEEEeecCceeEEe--c--cCceEEEEEecC
Q 020756 149 DMAFWDYVDGKQLGTTRAE-CSVTSEWSP-DGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKK--M--FDKLFQAEWKPV 222 (321)
Q Consensus 149 ~i~iwD~~~~~~i~~~~~~-~~~~~~wSp-dG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~--~--~~~~~~~~w~P~ 222 (321)
.|++||+.+++........ .+..+.||| ||++|++.+..+.......|.+|++.+..+... + ...+..+.|+|+
T Consensus 169 ~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp EEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTT
T ss_pred eEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCC
Confidence 8999999988665544433 678899999 899888877421110115688888866543221 2 124777899999
Q ss_pred CCCCCC
Q 020756 223 SPDKFG 228 (321)
Q Consensus 223 ~~~~~~ 228 (321)
+..++-
T Consensus 249 g~~l~~ 254 (396)
T 3c5m_A 249 GSAMAY 254 (396)
T ss_dssp SSCEEE
T ss_pred CCEEEE
Confidence 987653
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.48 E-value=9.2e-13 Score=131.10 Aligned_cols=179 Identities=11% Similarity=0.034 Sum_probs=116.3
Q ss_pred CCceEEEEEcCCcCCCCceeeeecccCccc---------eEEeC--CCCCe-eEEEEEecccCCCceeecceeEEEEEcC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFRCSTV---------QLNWN--RGSTG-LLAVAQSDVDKTNQSYYGESKLNYLTTD 70 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~---------~~~Ws--p~G~~-l~~~~~~d~d~t~~s~~g~~~l~~l~~~ 70 (321)
..+..+||.+.. +....+.+....+.. .+.|+ |||+. |++.. +. ...||.++..
T Consensus 45 ~~~~~~l~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~----~~-------~~~l~~~~~~ 110 (662)
T 3azo_A 45 EAGRATLVRRRA---DGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH----FG-------DQRLYAFEPD 110 (662)
T ss_dssp TTTEEEEEEECT---TSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB----TT-------TCCEEEECTT
T ss_pred cCCcEEEEEECC---CCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE----CC-------CCeEEEEcCC
Confidence 346788999744 444555554443333 56676 99999 76642 11 2348888887
Q ss_pred --C-CceeeeecC----CCCCeEEEEECcCCCEEEEEEccC--------CCeEEEEeCCC------ceeEEeC---CcCe
Q 020756 71 --G-THEGLVPLR----KEGPVHDVQWSYSGSEFAVVYGFM--------PASATIFNKKC------RPILELG---SGPY 126 (321)
Q Consensus 71 --g-~~~~~v~l~----~~~~v~~~~wsP~g~~l~~~~g~~--------~~~i~i~d~~~------~~~~~~~---~~~~ 126 (321)
+ .....+.-. +...+.+++|||||+.|+++.... ...|.+||+.+ .....+. ...+
T Consensus 111 ~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~ 190 (662)
T 3azo_A 111 APGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFV 190 (662)
T ss_dssp STTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEE
T ss_pred CCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcc
Confidence 3 433333321 455788999999999999874321 14789999977 5555543 3456
Q ss_pred eeEEEcCCCCeEEEEccCC-----CCCcEEEEECC-CC---eEEEeeeC--CCeeeEEEccCCCEEEEEEcCCceeecC-
Q 020756 127 NTVRWNPKGKFLCLAGFGN-----LPGDMAFWDYV-DG---KQLGTTRA--ECSVTSEWSPDGRYFMTATTAPRLQIDN- 194 (321)
Q Consensus 127 ~~~~~sPdG~~l~~~g~~n-----~~g~i~iwD~~-~~---~~i~~~~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~- 194 (321)
..+.|||||++|++++... ....|++||+. ++ +....... ..+..+.|||||++++++. .++
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~------~~~~ 264 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD------RTGW 264 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC------TTSS
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEEC------CCCC
Confidence 7799999999999876321 12489999998 56 44444433 3678899999999554444 255
Q ss_pred -cEEEEee
Q 020756 195 -GIKIFHH 201 (321)
Q Consensus 195 -~v~iw~~ 201 (321)
.|.+|+.
T Consensus 265 ~~l~~~~~ 272 (662)
T 3azo_A 265 WNLHRVDP 272 (662)
T ss_dssp CEEEEECT
T ss_pred eEEEEEEC
Confidence 4555555
No 165
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.47 E-value=9.5e-12 Score=122.09 Aligned_cols=179 Identities=12% Similarity=0.129 Sum_probs=127.5
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEc--CCCceeeeecCC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTT--DGTHEGLVPLRK 81 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~--~g~~~~~v~l~~ 81 (321)
.+.|+||+..+ ++.+........ ...+.+||+|++|++.. .| ..|..++. ... .....+..
T Consensus 158 d~~V~v~D~~t---~~~~~~i~~g~~-~~~v~~spdg~~l~v~~---~d---------~~V~v~D~~~~t~-~~~~~i~~ 220 (543)
T 1nir_A 158 AGQIALVDGDS---KKIVKVIDTGYA-VHISRMSASGRYLLVIG---RD---------ARIDMIDLWAKEP-TKVAEIKI 220 (543)
T ss_dssp GTEEEEEETTT---CCEEEEEECSTT-EEEEEECTTSCEEEEEE---TT---------SEEEEEETTSSSC-EEEEEEEC
T ss_pred CCeEEEEECCC---ceEEEEEecCcc-cceEEECCCCCEEEEEC---CC---------CeEEEEECcCCCC-cEEEEEec
Confidence 47899999988 677766664333 55778999999998863 11 23667777 322 23333445
Q ss_pred CCCeEEEEECc----CCCEEEEEEccCCCeEEEEeCCC-ceeEEeC-------------CcCeeeEEEcCCCCeEEEEcc
Q 020756 82 EGPVHDVQWSY----SGSEFAVVYGFMPASATIFNKKC-RPILELG-------------SGPYNTVRWNPKGKFLCLAGF 143 (321)
Q Consensus 82 ~~~v~~~~wsP----~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~~-------------~~~~~~~~~sPdG~~l~~~g~ 143 (321)
...+..++||| ||+++++. +..++.+.+||... +.+..+. ...+..+.++|++..++++..
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~-~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAG-AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEE-EEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CCCcceEEeCCCcCCCCCEEEEE-EccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 56679999999 99998886 34578999999854 4444441 125778999999887777652
Q ss_pred CCCCCcEEEEECCCCeEEE--eeeC-CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeE
Q 020756 144 GNLPGDMAFWDYVDGKQLG--TTRA-ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFF 207 (321)
Q Consensus 144 ~n~~g~i~iwD~~~~~~i~--~~~~-~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~ 207 (321)
.++.|.+||+.+.+.+. .+.. ..+..+.|+|||++|+++.. .++.|.+||.. |+++.
T Consensus 300 --~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~-----~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 300 --ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAAN-----NSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp --TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEE
T ss_pred --CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEec-----CCCeEEEEECCCCeEEE
Confidence 56899999998764322 3433 36778999999999888775 48999999984 55553
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.44 E-value=2.3e-11 Score=110.15 Aligned_cols=184 Identities=13% Similarity=0.102 Sum_probs=120.8
Q ss_pred CCceEEEEEcCCcCCCCceeeeeccc------CccceEEeCCCCCeeEEEEEecccCCCceee-cceeEEEEEcCCCce-
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFR------CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYY-GESKLNYLTTDGTHE- 74 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~------~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~-g~~~l~~l~~~g~~~- 74 (321)
..+.|.+|++.+ ++.+....... .....+.|+|+|++|++.... .......|. ....|+.++......
T Consensus 63 ~~~~i~~~d~~t---~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 63 HYGDIYGIDLDT---CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNP-TQRLNDHYVVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp TTTEEEEEETTT---TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEE-EEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred CCCcEEEEeCCC---CcEEEEEEcccccccccccccceEECCCCCEEEEEccc-ccccccccccCCCeEEEEECCCcccc
Confidence 356899999887 55555444322 125688999999999886421 111111111 124577777654211
Q ss_pred e-eeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEeCCc----------------------------
Q 020756 75 G-LVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILELGSG---------------------------- 124 (321)
Q Consensus 75 ~-~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~~~~---------------------------- 124 (321)
. .....+...+.+++|+|+|+ +++. + ..+.+||... +.+..+...
T Consensus 139 ~~~~~~~~~~~~~~~~~s~dg~-l~~~-~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (349)
T 1jmx_B 139 KPVRTFPMPRQVYLMRAADDGS-LYVA-G---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSML 213 (349)
T ss_dssp CCSEEEECCSSCCCEEECTTSC-EEEE-S---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEE
T ss_pred ceeeeccCCCcccceeECCCCc-EEEc-c---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEee
Confidence 1 11222344688999999999 5553 2 2499999854 333333111
Q ss_pred ------------------------------------------CeeeEEEcC-CCCeEEEEccCCCCCcEEEEECCCCeEE
Q 020756 125 ------------------------------------------PYNTVRWNP-KGKFLCLAGFGNLPGDMAFWDYVDGKQL 161 (321)
Q Consensus 125 ------------------------------------------~~~~~~~sP-dG~~l~~~g~~n~~g~i~iwD~~~~~~i 161 (321)
....+.|+| +|++|+++ ++.|.+||+.+++.+
T Consensus 214 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~ 288 (349)
T 1jmx_B 214 YTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLI 288 (349)
T ss_dssp EEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEE
T ss_pred eeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEE
Confidence 234567889 99998887 379999999999888
Q ss_pred EeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee
Q 020756 162 GTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF 206 (321)
Q Consensus 162 ~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l 206 (321)
..+... .+..++|+|||++|+++. .++.+.+||.. ++.+
T Consensus 289 ~~~~~~~~~~~~~~s~dg~~l~~~~------~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 289 KAANLDHTYYCVAFDKKGDKLYLGG------TFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEEECSSCCCEEEECSSSSCEEEES------BSSEEEEEETTTTEEE
T ss_pred EEEcCCCCccceEECCCCCEEEEec------CCCeEEEEecccccee
Confidence 777643 677899999999998865 38899999995 4444
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.44 E-value=8.8e-12 Score=123.99 Aligned_cols=184 Identities=9% Similarity=-0.030 Sum_probs=117.1
Q ss_pred CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCC------CceeeeecCCCCCeEEEEECcCCCEEEEEEc
Q 020756 29 CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDG------THEGLVPLRKEGPVHDVQWSYSGSEFAVVYG 102 (321)
Q Consensus 29 ~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g------~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g 102 (321)
.....+.|||||+.|++......+. ....+...|+.++..+ +....+...+...+..++|||||++|+++..
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGE--GPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSS--STTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred ccccCcEECCCCCEEEEEEecccCC--CCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEEC
Confidence 4556889999999998865321100 0112445799999887 4333332134567888999999999998753
Q ss_pred cC------CCeEEEEeCCC-c---eeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCC--cEEEEECCCCeEEEeeeCC
Q 020756 103 FM------PASATIFNKKC-R---PILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPG--DMAFWDYVDGKQLGTTRAE 167 (321)
Q Consensus 103 ~~------~~~i~i~d~~~-~---~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g--~i~iwD~~~~~~i~~~~~~ 167 (321)
.. ...|.+||+.+ . ....+ +...+..+.|||||++++++. .++ .|++||+.+++.......+
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~---~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD---RTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC---TTSSCEEEEECTTTCCEEESSCCS
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEEC---CCCCeEEEEEECCCCceeeccccc
Confidence 32 14799999973 3 33333 357888999999999555554 445 7888888777655443332
Q ss_pred -C---------eeeEEEccCCCEEEEEEcCCceeecCcEEEE--eecCceeEE--eccCceEEEEEecCCCC
Q 020756 168 -C---------SVTSEWSPDGRYFMTATTAPRLQIDNGIKIF--HHNGSLFFK--KMFDKLFQAEWKPVSPD 225 (321)
Q Consensus 168 -~---------~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw--~~~g~~l~~--~~~~~~~~~~w~P~~~~ 225 (321)
. +..++|+|+|++++++. . +.++|| +..+..+.. .+...+..+ |++++..
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~~~~~~~~------~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~ 348 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANGLIAVVHG------K-GAAVLGILDPESGELVDAAGPWTEWAAT-LTVSGTR 348 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTSCEEEEEB------S-SSCEEEEEETTTTEEEECCSSCCEEEEE-EEEETTE
T ss_pred ccccCccccccCceEeEeCCCEEEEEEE------c-CccEEEEEECCCCcEEEecCCCCeEEEE-EecCCCE
Confidence 1 45688899999887776 3 667777 545444422 233344443 3554443
No 168
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.42 E-value=2.2e-11 Score=119.51 Aligned_cols=203 Identities=13% Similarity=0.092 Sum_probs=138.1
Q ss_pred CceEEEEEc--CCcCCCCceeeeecccCccceEEeCC----CCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceee
Q 020756 4 PASVQIYAC--GKDLQSQPLARRSFFRCSTVQLNWNR----GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGL 76 (321)
Q Consensus 4 p~~v~v~~~--~~~~~~~~i~~~~~f~~~~~~~~Wsp----~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~ 76 (321)
.+.|++|++ .+ ++.+.+... ......+.||| +|++|++... ....+.+++.... ....
T Consensus 199 d~~V~v~D~~~~t---~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~-----------~~~~v~v~D~~t~~~~~~ 263 (543)
T 1nir_A 199 DARIDMIDLWAKE---PTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAY-----------WPPQFAIMDGETLEPKQI 263 (543)
T ss_dssp TSEEEEEETTSSS---CEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEE-----------ESSEEEEEETTTCCEEEE
T ss_pred CCeEEEEECcCCC---CcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEc-----------cCCeEEEEecccccccee
Confidence 478999999 56 566666553 34678999999 9999887532 1223455554332 1222
Q ss_pred eecC----------CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc---eeEEe-CCcCeeeEEEcCCCCeEEEEc
Q 020756 77 VPLR----------KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR---PILEL-GSGPYNTVRWNPKGKFLCLAG 142 (321)
Q Consensus 77 v~l~----------~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~---~~~~~-~~~~~~~~~~sPdG~~l~~~g 142 (321)
+... .+..+..+.++|++..+++. ...+++|.+||+... .+..+ +......+.|+|+|++|++++
T Consensus 264 i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs-~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~ 342 (543)
T 1nir_A 264 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN-VKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAA 342 (543)
T ss_dssp EECCEECSSSCCEESCCCEEEEEECSSSSEEEEE-ETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEE
T ss_pred ecccCcccCccccccCCceEEEEECCCCCEEEEE-ECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEe
Confidence 2221 13378899999999988776 456789999998542 22244 345577899999999888766
Q ss_pred cCCCCCcEEEEECCCCeEEEeeeC----CCeeeEE-EccC-CCEEEEEEcCCceeecCcEEEEeec--------CceeEE
Q 020756 143 FGNLPGDMAFWDYVDGKQLGTTRA----ECSVTSE-WSPD-GRYFMTATTAPRLQIDNGIKIFHHN--------GSLFFK 208 (321)
Q Consensus 143 ~~n~~g~i~iwD~~~~~~i~~~~~----~~~~~~~-wSpd-G~~l~t~~s~~rl~~d~~v~iw~~~--------g~~l~~ 208 (321)
. .+++|.+||+.+++++..+.. |....+. ++|+ |+.++++.. .|+.|.||++. ++.+..
T Consensus 343 ~--~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~-----~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 343 N--NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL-----GDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp G--GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBS-----SSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred c--CCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccC-----CCceEEEEEeCCCCCchhcCeEEEE
Confidence 2 468999999999998888764 2111223 4787 555555542 27899999995 355533
Q ss_pred e--ccCceEEEEEecCCCCCCCC
Q 020756 209 K--MFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 209 ~--~~~~~~~~~w~P~~~~~~~~ 229 (321)
. +......+.++|++..++..
T Consensus 416 l~~~g~~~~~v~~~pdg~~l~v~ 438 (543)
T 1nir_A 416 LQGQGGGSLFIKTHPKSSHLYVD 438 (543)
T ss_dssp EECSCSCCCCEECCTTCCEEEEC
T ss_pred EEcCCCCceEEEcCCCCCcEEEe
Confidence 3 44567789999999988865
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.42 E-value=1.4e-11 Score=114.01 Aligned_cols=185 Identities=10% Similarity=0.065 Sum_probs=118.5
Q ss_pred CCceEEEEEcCCcCCCCceeeeecc----cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcC-CCceee-
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFF----RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTD-GTHEGL- 76 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f----~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~-g~~~~~- 76 (321)
..+.+.||++... ++.......+ ......+.|+|+|++|++.. . +...|+.++.+ .+....
T Consensus 117 ~~g~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~---~--------~~~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 117 FAGYGNVFSVSET--GKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD---L--------TANKLWTHRKLASGEVELV 183 (365)
T ss_dssp SCCEEEEEEECTT--CCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE---T--------TTTEEEEEEECTTSCEEEE
T ss_pred CCceEEEEccCCC--CcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc---C--------CCCEEEEEEECCCCCEEEe
Confidence 4678999999741 3333333321 23566889999999886641 1 22345666654 222221
Q ss_pred --eecC-CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC---Ccee---EEe---CC-----c-------CeeeEE-E
Q 020756 77 --VPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK---CRPI---LEL---GS-----G-------PYNTVR-W 131 (321)
Q Consensus 77 --v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~---~~~~---~~~---~~-----~-------~~~~~~-~ 131 (321)
+.+. +...+..++|+|||++++++ ...++.+.+|+++ +... ..+ .. . ....+. |
T Consensus 184 ~~~~~~~~g~~p~~~~~spdg~~l~v~-~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 262 (365)
T 1jof_A 184 GSVDAPDPGDHPRWVAMHPTGNYLYAL-MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL 262 (365)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEE-ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE
T ss_pred eeEecCCCCCCCCEeEECCCCCEEEEE-ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEE
Confidence 2222 35568899999999998876 3446789999764 2221 122 11 1 367899 9
Q ss_pred cCCCCeEEEEccCCC---CCcEEEEECC-CCeEEE---eeeCC--CeeeEEEcc---CCCEEEEEEcCCceeecCcEEEE
Q 020756 132 NPKGKFLCLAGFGNL---PGDMAFWDYV-DGKQLG---TTRAE--CSVTSEWSP---DGRYFMTATTAPRLQIDNGIKIF 199 (321)
Q Consensus 132 sPdG~~l~~~g~~n~---~g~i~iwD~~-~~~~i~---~~~~~--~~~~~~wSp---dG~~l~t~~s~~rl~~d~~v~iw 199 (321)
||||++|+++..+.. .+.|.+||++ +++... ....+ ....++||| ||++|+++.. .++.|.||
T Consensus 263 spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~-----~~~~v~v~ 337 (365)
T 1jof_A 263 TFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD-----QEGWLEIY 337 (365)
T ss_dssp CTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS-----SSCEEEEE
T ss_pred CCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc-----CCCeEEEE
Confidence 999999987653211 2389999986 565432 13222 466789999 8999999874 25899999
Q ss_pred eecCcee
Q 020756 200 HHNGSLF 206 (321)
Q Consensus 200 ~~~g~~l 206 (321)
+++++.+
T Consensus 338 ~~~~~~l 344 (365)
T 1jof_A 338 RWKDEFL 344 (365)
T ss_dssp EEETTEE
T ss_pred EEchhhC
Confidence 9987644
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.41 E-value=2.4e-11 Score=110.73 Aligned_cols=199 Identities=10% Similarity=0.103 Sum_probs=120.5
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGP 84 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~ 84 (321)
+.|.+|++.. ++. .+. .....+.|||||++|+++.... +. +...||.++..++....+.. ...
T Consensus 43 ~~l~~~d~~~---~~~-~~l----~~~~~~~~SpDg~~la~~~~~~----~~---~~~~l~~~~~~~g~~~~l~~-~~~- 105 (347)
T 2gop_A 43 NTIVIENLKN---NAR-RFI----ENATMPRISPDGKKIAFMRANE----EK---KVSEIWVADLETLSSKKILE-AKN- 105 (347)
T ss_dssp EEEEEEETTT---CCE-EEE----ESCEEEEECTTSSEEEEEEEET----TT---TEEEEEEEETTTTEEEEEEE-ESE-
T ss_pred ceEEEEeCCC---Cce-EEc----ccCCCeEECCCCCEEEEEEecc----CC---CcceEEEEECCCCceEEEEc-CCC-
Confidence 4566666665 332 222 4566789999999999874321 11 34468999987764444432 233
Q ss_pred eEEEEECcCCCEEEEEEcc-------------------------CCCeEEEEeCCCcee-EEeCCcCeeeEEEcCCCCeE
Q 020756 85 VHDVQWSYSGSEFAVVYGF-------------------------MPASATIFNKKCRPI-LELGSGPYNTVRWNPKGKFL 138 (321)
Q Consensus 85 v~~~~wsP~g~~l~~~~g~-------------------------~~~~i~i~d~~~~~~-~~~~~~~~~~~~~sPdG~~l 138 (321)
+..+.|+|||+.|+++... ....|.+||+.+... ..+....+..+.|+||| ++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~ 184 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IV 184 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EE
Confidence 9999999999999987421 024688899966544 44411277889999999 66
Q ss_pred EEEccCCC------CCcEEEEECCCCeEEEeeeCCCeeeEEEccCCCEEEEEEcCCcee--ecCcEEEEeecCcee--EE
Q 020756 139 CLAGFGNL------PGDMAFWDYVDGKQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQ--IDNGIKIFHHNGSLF--FK 208 (321)
Q Consensus 139 ~~~g~~n~------~g~i~iwD~~~~~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~--~d~~v~iw~~~g~~l--~~ 208 (321)
+++..... ...|+++| +++....... .....+||||++|++++...... ....|.+|| +|+.. ..
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~--~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~ 259 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK--VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GKEVMGILD 259 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE--ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEEESST
T ss_pred EEEecccccccccccccEEEeC--CCceEEeccC--cceeeECCCCCEEEEEEccccCCccccceEEEEC-CCceEeccc
Confidence 65542211 23566666 5544332222 23334599999999888521100 124677888 66543 22
Q ss_pred eccCceEE-EEEecCCCCCCC
Q 020756 209 KMFDKLFQ-AEWKPVSPDKFG 228 (321)
Q Consensus 209 ~~~~~~~~-~~w~P~~~~~~~ 228 (321)
.+...+.. +.|+ +. .++.
T Consensus 260 ~~~~~~~~~~~~s-dg-~~~~ 278 (347)
T 2gop_A 260 EVDRGVGQAKIKD-GK-VYFT 278 (347)
T ss_dssp TCCSEEEEEEEET-TE-EEEE
T ss_pred cCCcccCCccEEc-Cc-EEEE
Confidence 22345665 8898 65 4443
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.40 E-value=4.7e-12 Score=116.94 Aligned_cols=166 Identities=8% Similarity=0.018 Sum_probs=108.6
Q ss_pred ceeEEEEEcCCCceeeeecCCCCCeEEEEECc-CCCEEEEEEccCC----CeEEEEeCCCceeEEeCC----cCeeeEEE
Q 020756 61 ESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSY-SGSEFAVVYGFMP----ASATIFNKKCRPILELGS----GPYNTVRW 131 (321)
Q Consensus 61 ~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP-~g~~l~~~~g~~~----~~i~i~d~~~~~~~~~~~----~~~~~~~~ 131 (321)
...|+.++..++....+. .+...+..+.|+| +|+.|+++..... ..|.+||+.+.....+.. ..+..+.|
T Consensus 167 ~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFW 245 (396)
T ss_dssp CEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEE
T ss_pred cceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEE
Confidence 346888888765444333 4567789999999 8988888754222 478899987765555522 24677899
Q ss_pred cCCCCeEEEEccCCCC--CcEEEEECCCCeEEEeeeCCCeeeEEEcc-CCCEEEEEEcC-C---------ceeecCcEEE
Q 020756 132 NPKGKFLCLAGFGNLP--GDMAFWDYVDGKQLGTTRAECSVTSEWSP-DGRYFMTATTA-P---------RLQIDNGIKI 198 (321)
Q Consensus 132 sPdG~~l~~~g~~n~~--g~i~iwD~~~~~~i~~~~~~~~~~~~wSp-dG~~l~t~~s~-~---------rl~~d~~v~i 198 (321)
||||++|++.+..+.. +.|++||+.+++........... +.|+| ||++|+++.+. | ....+..+.+
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~ 324 (396)
T 3c5m_A 246 IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV 324 (396)
T ss_dssp CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred CCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence 9999998887632222 34999999888654433333333 89999 99988876531 0 0012467999
Q ss_pred EeecCcee--EEeccC-----------ceEEEEEecCCCCCCC
Q 020756 199 FHHNGSLF--FKKMFD-----------KLFQAEWKPVSPDKFG 228 (321)
Q Consensus 199 w~~~g~~l--~~~~~~-----------~~~~~~w~P~~~~~~~ 228 (321)
||+.+..+ ...+.. ....+.|+|++..++.
T Consensus 325 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 367 (396)
T 3c5m_A 325 LNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLF 367 (396)
T ss_dssp EETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEE
T ss_pred EecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEE
Confidence 99865433 222222 1456789998776553
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.38 E-value=3.7e-11 Score=109.39 Aligned_cols=180 Identities=9% Similarity=0.076 Sum_probs=110.5
Q ss_pred ceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccC---CCeE
Q 020756 32 VQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFM---PASA 108 (321)
Q Consensus 32 ~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~---~~~i 108 (321)
..+.| ||+.|++..... +..... ....||+++..+.....+ ..+..+.|||||++|+++.... ...|
T Consensus 18 ~~~~~--dG~~i~~~~~~~-~~~~~~--~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 18 SDPRT--KGELVAYVLTKA-NLKDNK--YENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp EEEEE--ETTEEEEEEEEE-ETTTTE--EEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred ccceE--CCcEEEEEEeec-CcccCC--ccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 35566 999998875432 111112 244688988887644443 5688999999999999875332 2257
Q ss_pred EEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccC------------------------CCCCcEEEEECCCCeEEE
Q 020756 109 TIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFG------------------------NLPGDMAFWDYVDGKQLG 162 (321)
Q Consensus 109 ~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~------------------------n~~g~i~iwD~~~~~~i~ 162 (321)
.++|+.+.....+ +.. +..+.|||||+.|++++.. .....|++||+.+++.+.
T Consensus 88 ~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 88 WVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 7888866544333 233 8999999999999998632 013579999999887622
Q ss_pred eeeCCCeeeEEEccCCCEEEEEEcCCcee--e-cCcEEEEeecCcee-EEeccCceEEEEEecCCCCCC
Q 020756 163 TTRAECSVTSEWSPDGRYFMTATTAPRLQ--I-DNGIKIFHHNGSLF-FKKMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 163 ~~~~~~~~~~~wSpdG~~l~t~~s~~rl~--~-d~~v~iw~~~g~~l-~~~~~~~~~~~~w~P~~~~~~ 227 (321)
.+....+..+.||||| +++++....... . ...+.+++ .|+.. ...+ ..+. .++|++..++
T Consensus 167 ~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~-~~~~--~~spdg~~l~ 230 (347)
T 2gop_A 167 EFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMFEK-VSFY--AVDSDGERIL 230 (347)
T ss_dssp EEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEEEE-ESEE--EEEECSSCEE
T ss_pred eecCCCcccccCCCCe-EEEEEecccccccccccccEEEeC-CCceEEeccC-ccee--eECCCCCEEE
Confidence 2221267789999999 655554210000 0 11344455 44432 2222 3333 4488887765
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.27 E-value=4.1e-10 Score=113.45 Aligned_cols=189 Identities=8% Similarity=-0.014 Sum_probs=119.4
Q ss_pred cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccC------
Q 020756 31 TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFM------ 104 (321)
Q Consensus 31 ~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~------ 104 (321)
...+.|||||++|++.... .|.. ...|+++++.++......+.. ..+.+++|+|||+.|++.....
T Consensus 127 ~~~~~~SPDg~~la~~~~~----~G~~---~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSA----SGSD---WVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp EEEEEECTTSSEEEEEEEE----TTCS---CEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred EEEEEECCCCCEEEEEEcC----CCCc---eEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccc
Confidence 4578999999999987542 1221 125899998876444433322 2367899999999999875332
Q ss_pred --------CCeEEEEeCCCce---eEEe----CCcCeeeEEEcCCCCeEEEEccCCC--CCcEEEEECCC------Ce-E
Q 020756 105 --------PASATIFNKKCRP---ILEL----GSGPYNTVRWNPKGKFLCLAGFGNL--PGDMAFWDYVD------GK-Q 160 (321)
Q Consensus 105 --------~~~i~i~d~~~~~---~~~~----~~~~~~~~~~sPdG~~l~~~g~~n~--~g~i~iwD~~~------~~-~ 160 (321)
+..|.+|++.+.. ...+ +...+..+.|||||++|++...... +..|++||+.+ +. .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 2359999986542 2322 2334678999999999998764222 57899999976 42 2
Q ss_pred EEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-----eeEEeccC--ceEEEEEecCCCCCCCC
Q 020756 161 LGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-----LFFKKMFD--KLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 161 i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-----~l~~~~~~--~~~~~~w~P~~~~~~~~ 229 (321)
+..+..+ ......|+|||+.|+..+..- .....|.+|++.+. .....+.. .+..+.|.+....++..
T Consensus 279 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 279 WVKLIDNFEGEYDYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp CEEEECSSSSCEEEEEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred eEEeeCCCCcEEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 3333332 223346999999999887520 01235888888542 12222322 57778888655444443
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.27 E-value=1.5e-10 Score=116.64 Aligned_cols=182 Identities=12% Similarity=0.062 Sum_probs=114.1
Q ss_pred CCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee----ecC--CCCCeEEEEECcCCCEEEEEEccCC---Ce
Q 020756 37 NRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV----PLR--KEGPVHDVQWSYSGSEFAVVYGFMP---AS 107 (321)
Q Consensus 37 sp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v----~l~--~~~~v~~~~wsP~g~~l~~~~g~~~---~~ 107 (321)
+|+|+++++.... .++. ...||.++..+.....+ .+. +...+..++|||||++|++...... ..
T Consensus 80 ~~dG~~~~~~~~~----~~~~---~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~ 152 (710)
T 2xdw_A 80 FKKGKRYFYFYNT----GLQN---QRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVT 152 (710)
T ss_dssp EEETTEEEEEEEC----SSCS---SCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEE
T ss_pred EEECCEEEEEEEc----CCce---EEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEE
Confidence 3899999887432 1221 11467777655433322 112 2235889999999999998643222 28
Q ss_pred EEEEeCCCceeEE--eCCcCeeeEEEcCCCCeEEEEccCCC-------------CCcEEEEECCCCe----EEEeeeCC-
Q 020756 108 ATIFNKKCRPILE--LGSGPYNTVRWNPKGKFLCLAGFGNL-------------PGDMAFWDYVDGK----QLGTTRAE- 167 (321)
Q Consensus 108 i~i~d~~~~~~~~--~~~~~~~~~~~sPdG~~l~~~g~~n~-------------~g~i~iwD~~~~~----~i~~~~~~- 167 (321)
|.+||+.+..... +....+..+.|||||+.|+++..... ...|++|++.++. ++.....+
T Consensus 153 i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~ 232 (710)
T 2xdw_A 153 IKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP 232 (710)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred EEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC
Confidence 9999997654443 33334678999999999999873211 2349999998764 33333222
Q ss_pred -CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-------c--ee-EEeccCceEEEEEecCCCCCC
Q 020756 168 -CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-------S--LF-FKKMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 168 -~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-------~--~l-~~~~~~~~~~~~w~P~~~~~~ 227 (321)
....+.|||||++|+..+.... ..++.+++||+.+ . .. ...+...... .|+|++..++
T Consensus 233 ~~~~~~~~SpDg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~ 301 (710)
T 2xdw_A 233 KWMGGAELSDDGRYVLLSIREGC-DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFT 301 (710)
T ss_dssp TCEEEEEECTTSCEEEEEEECSS-SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEE
T ss_pred eEEEEEEEcCCCCEEEEEEEccC-CCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEE
Confidence 3678999999999998874110 0156799999864 2 22 3333333433 4777766554
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.26 E-value=1.7e-10 Score=116.01 Aligned_cols=179 Identities=12% Similarity=0.115 Sum_probs=111.2
Q ss_pred eCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec------CCCCCeEEEEECcCCCEEEEEE---ccCCC
Q 020756 36 WNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL------RKEGPVHDVQWSYSGSEFAVVY---GFMPA 106 (321)
Q Consensus 36 Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l------~~~~~v~~~~wsP~g~~l~~~~---g~~~~ 106 (321)
.+|+|+++++..... ++. ...||.++..+.....+.- .+...+..++|||||++|++.. |....
T Consensus 75 p~~dG~~~~~~~~~~----~~~---~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~ 147 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHK----DKE---KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEA 147 (695)
T ss_dssp CEEETTEEEEEEECT----TCS---SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCC
T ss_pred CEEECCEEEEEEEcC----CCe---EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceE
Confidence 458999998864321 211 1246787776654444321 1334688999999999999764 33346
Q ss_pred eEEEEeCCCceeE---EeCCcCeeeEEEcCCCCeEEEEccCC----------CCCcEEEEECCCCe----EEEeeeCC--
Q 020756 107 SATIFNKKCRPIL---ELGSGPYNTVRWNPKGKFLCLAGFGN----------LPGDMAFWDYVDGK----QLGTTRAE-- 167 (321)
Q Consensus 107 ~i~i~d~~~~~~~---~~~~~~~~~~~~sPdG~~l~~~g~~n----------~~g~i~iwD~~~~~----~i~~~~~~-- 167 (321)
.|.+||+.+.... .+.......+.|||||+.|++++... ....|++|++.++. ++.....+
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~ 227 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPT 227 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTT
T ss_pred EEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCE
Confidence 8999999765443 22222236899999999999988321 12349999998764 44443333
Q ss_pred CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee-EEeccCceEEEEEecCCC
Q 020756 168 CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF-FKKMFDKLFQAEWKPVSP 224 (321)
Q Consensus 168 ~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l-~~~~~~~~~~~~w~P~~~ 224 (321)
.+..+.|||||++|+.++.... ..+.+.+|+.. +... ...+........| |++.
T Consensus 228 ~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~ 283 (695)
T 2bkl_A 228 TFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR 283 (695)
T ss_dssp CEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE
T ss_pred EEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc
Confidence 5678999999999998874100 01256666653 3322 3334444555556 4443
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.24 E-value=6e-09 Score=96.65 Aligned_cols=206 Identities=10% Similarity=0.088 Sum_probs=129.6
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEeccc-CCCceeecceeEEEEEcCCC-ceeeeecC-
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVD-KTNQSYYGESKLNYLTTDGT-HEGLVPLR- 80 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d-~t~~s~~g~~~l~~l~~~g~-~~~~v~l~- 80 (321)
.+.|.+|+..+ ++.+........ . .+.++|+|++|++....... ..|. ....+..++.... ....+.+.
T Consensus 30 d~~v~v~D~~t---~~~~~~i~~g~~-p-~i~~spdg~~lyv~~~~~~~~~~g~---~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 30 ESRVHVYDYTN---GKFLGMVPTAFN-G-HVQVSNDGKKIYTMTTYHERITRGK---RSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp GCEEEEEETTT---CCEEEEEECCEE-E-EEEECTTSSEEEEEEEEETTSSSSC---EEEEEEEEETTTCCEEEEEEECT
T ss_pred cCeEEEEECCC---CeEEEEecCCCC-C-ceEECCCCCEEEEEEecccccccCC---CCCEEEEEECcCCcEEEEEEcCc
Confidence 45788998877 666655554433 3 89999999999886321100 0011 1224666666432 22334332
Q ss_pred ----CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEE-e--------------------------------C
Q 020756 81 ----KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILE-L--------------------------------G 122 (321)
Q Consensus 81 ----~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~-~--------------------------------~ 122 (321)
+......++++|||++|++.....++.|.+||+... .+.. + .
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 123467899999999998863222457888876321 1111 0 0
Q ss_pred C-cC----------------------------------------------------------------------eeeEEE
Q 020756 123 S-GP----------------------------------------------------------------------YNTVRW 131 (321)
Q Consensus 123 ~-~~----------------------------------------------------------------------~~~~~~ 131 (321)
. +. ...+.|
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred CCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE
Confidence 0 00 001677
Q ss_pred cCCCCeEEEEccCC--------CCCcEEEEECCCCeEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-
Q 020756 132 NPKGKFLCLAGFGN--------LPGDMAFWDYVDGKQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN- 202 (321)
Q Consensus 132 sPdG~~l~~~g~~n--------~~g~i~iwD~~~~~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~- 202 (321)
+|+|+.+.++...+ ....|.+||+.+++.+..+..+....++|||||++|+++. ++.|.|||..
T Consensus 262 ~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~p~~ia~spdg~~l~v~n-------~~~v~v~D~~t 334 (361)
T 2oiz_A 262 HRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRDALSMTIDQQRNLMLTLD-------GGNVNVYDISQ 334 (361)
T ss_dssp ETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTTCCEEEEETTTTEEEEEC-------SSCEEEEECSS
T ss_pred ecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCCeeEEEECCCCCEEEEeC-------CCeEEEEECCC
Confidence 88888777654201 1358999999999999888765588899999999888766 3899999984
Q ss_pred C--ceeEEe-c-cCceEEEEEecCCC
Q 020756 203 G--SLFFKK-M-FDKLFQAEWKPVSP 224 (321)
Q Consensus 203 g--~~l~~~-~-~~~~~~~~w~P~~~ 224 (321)
+ +.+... . -.....+.++|++.
T Consensus 335 ~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 335 PEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CcceeeEEeccCCCCcEEEEecCCCC
Confidence 5 555443 2 24567888988763
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.16 E-value=3.8e-08 Score=87.12 Aligned_cols=155 Identities=14% Similarity=0.169 Sum_probs=109.9
Q ss_pred eeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC----CcCeeeEEEcCCCCe
Q 020756 62 SKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG----SGPYNTVRWNPKGKF 137 (321)
Q Consensus 62 ~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~----~~~~~~~~~sPdG~~ 137 (321)
..|+.++.++.....+.......+++++++|+|+.++. ....+.|.+||..+..+..+. ....+.++++|+|++
T Consensus 100 ~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVV--ECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp CEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEE--ETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEE
T ss_pred CEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEE--ECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCE
Confidence 35677776665433343334457899999999985544 344679999998887776662 245788999999997
Q ss_pred EEEEccCCCCCcEEEEECCCCeEEEeeeC----CCeeeEEEccCCCEEEEEEcCCceeecC-cEEEEeecCceeEEe--c
Q 020756 138 LCLAGFGNLPGDMAFWDYVDGKQLGTTRA----ECSVTSEWSPDGRYFMTATTAPRLQIDN-GIKIFHHNGSLFFKK--M 210 (321)
Q Consensus 138 l~~~g~~n~~g~i~iwD~~~~~~i~~~~~----~~~~~~~wSpdG~~l~t~~s~~rl~~d~-~v~iw~~~g~~l~~~--~ 210 (321)
+++.. .++.|.+||. +++.+..+.. ..+..++++++|+++++... ++ .|.+|+.+|+.+... +
T Consensus 178 ~v~~~---~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~------~~~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 178 FISDN---RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNH------NNFNLTIFTQDGQLISALESK 247 (286)
T ss_dssp EEEEG---GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECS------SSCEEEEECTTSCEEEEEEES
T ss_pred EEEEC---CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCC------CCEEEEEECCCCCEEEEEccc
Confidence 76665 5689999998 4555555543 25778999999987777663 65 899999998876333 2
Q ss_pred c--CceEEEEEecCCCCCCC
Q 020756 211 F--DKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 211 ~--~~~~~~~w~P~~~~~~~ 228 (321)
. ..+..+++.|++..+++
T Consensus 248 ~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 248 VKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp SCCSCEEEEEEETTTEEEEE
T ss_pred CCCCcceeEEECCCCcEEEE
Confidence 2 24778999998754444
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.15 E-value=1.4e-08 Score=91.86 Aligned_cols=204 Identities=8% Similarity=0.075 Sum_probs=125.0
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee-e-cCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV-P-LRKE 82 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v-~-l~~~ 82 (321)
+.|.+|+... ++..............+.|+++|+.++.. ..+ +. ....|+.++..+.....+ . ....
T Consensus 66 ~~i~~~d~~~---~~~~~~~~~~~~~~~~i~~~~dg~l~v~~-~~~----~~---~~~~i~~~d~~~~~~~~~~~~~~~~ 134 (333)
T 2dg1_A 66 GNIFKINPET---KEIKRPFVSHKANPAAIKIHKDGRLFVCY-LGD----FK---STGGIFAATENGDNLQDIIEDLSTA 134 (333)
T ss_dssp CEEEEECTTT---CCEEEEEECSSSSEEEEEECTTSCEEEEE-CTT----SS---SCCEEEEECTTSCSCEEEECSSSSC
T ss_pred CEEEEEeCCC---CcEEEEeeCCCCCcceEEECCCCcEEEEe-CCC----CC---CCceEEEEeCCCCEEEEEEccCccC
Confidence 4566676655 33222111223456788999999754432 100 00 113578888766543322 1 1234
Q ss_pred CCeEEEEECcCCCEEEEEEcc----CCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC
Q 020756 83 GPVHDVQWSYSGSEFAVVYGF----MPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV 156 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~----~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~ 156 (321)
..++++.++|+|+.++..... ..+.|..+|.++..+..+ +....+.+.|+|+|+.|+++.. .++.|++||++
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~--~~~~i~~~d~~ 212 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET--TANRLHRIALE 212 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEEC
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeC--CCCeEEEEEec
Confidence 578999999999866653210 124677777765444333 3345788999999997766542 35799999986
Q ss_pred C-CeEEE--------eeeC-CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEeccC--------ceEEEE
Q 020756 157 D-GKQLG--------TTRA-ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKKMFD--------KLFQAE 218 (321)
Q Consensus 157 ~-~~~i~--------~~~~-~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~~~~--------~~~~~~ 218 (321)
+ +..+. .+.. ..+..++++++|+++++... ++.|.+|+.+|+.+...... .+..+.
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~------~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~ 286 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG------QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQ 286 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET------TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEE
T ss_pred CCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC------CCEEEEECCCCCEEEEEEcCCCccccccCcceEE
Confidence 3 32221 1112 24566999999997776662 68899999988876443222 478899
Q ss_pred EecCCCCCC
Q 020756 219 WKPVSPDKF 227 (321)
Q Consensus 219 w~P~~~~~~ 227 (321)
|.|+...++
T Consensus 287 ~~~dg~~L~ 295 (333)
T 2dg1_A 287 FIPGTNQLI 295 (333)
T ss_dssp ECTTSCEEE
T ss_pred ECCCCCEEE
Confidence 998866665
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.12 E-value=1.4e-08 Score=90.02 Aligned_cols=170 Identities=12% Similarity=0.132 Sum_probs=110.1
Q ss_pred CceEEEEEcCCcCCCCceeeeecc-cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec-CC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFF-RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL-RK 81 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f-~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l-~~ 81 (321)
.+.|.+|+ +. ++.+...... ......+.++++|+ +++.. . +...|+.++.++.....+.. .+
T Consensus 99 ~~~i~~~d-~~---g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~-~----------~~~~i~~~~~~g~~~~~~~~~~~ 162 (286)
T 1q7f_A 99 THQIQIYN-QY---GQFVRKFGATILQHPRGVTVDNKGR-IIVVE-C----------KVMRVIIFDQNGNVLHKFGCSKH 162 (286)
T ss_dssp GCEEEEEC-TT---SCEEEEECTTTCSCEEEEEECTTSC-EEEEE-T----------TTTEEEEECTTSCEEEEEECTTT
T ss_pred CCEEEEEC-CC---CcEEEEecCccCCCceEEEEeCCCC-EEEEE-C----------CCCEEEEEcCCCCEEEEeCCCCc
Confidence 34566666 33 3433322111 12345677888876 33321 0 12346777766653333322 23
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC-C---cCeeeEEEcCCCCeEEEEccCCCCC-cEEEEECC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG-S---GPYNTVRWNPKGKFLCLAGFGNLPG-DMAFWDYV 156 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~-~---~~~~~~~~sPdG~~l~~~g~~n~~g-~i~iwD~~ 156 (321)
...+.+++++|+|+.+++ ...++.|.+||..+..+..+. . .....++++|+|+++++.. .++ .|.+||.
T Consensus 163 ~~~p~~i~~~~~g~l~v~--~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~---~~~~~i~~~~~- 236 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFIS--DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADN---HNNFNLTIFTQ- 236 (286)
T ss_dssp CSSEEEEEECSSSEEEEE--EGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEEC---SSSCEEEEECT-
T ss_pred cCCcEEEEECCCCCEEEE--ECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeC---CCCEEEEEECC-
Confidence 346889999999984443 345679999999888777773 2 4577899999998777765 454 9999997
Q ss_pred CCeEEEeeeCC----CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 157 DGKQLGTTRAE----CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 157 ~~~~i~~~~~~----~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
+++.+..+..+ .+..++|+|||+++++ .. ++.|+||++.
T Consensus 237 ~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~------~~~v~v~~~~ 279 (286)
T 1q7f_A 237 DGQLISALESKVKHAQCFDVALMDDGSVVLA-SK------DYRLYIYRYV 279 (286)
T ss_dssp TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ET------TTEEEEEECS
T ss_pred CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CC------CCeEEEEEcc
Confidence 45555555432 3668999999987766 42 8999999974
No 180
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.08 E-value=3.3e-09 Score=107.46 Aligned_cols=182 Identities=12% Similarity=0.044 Sum_probs=110.9
Q ss_pred eCCCCCeeEEEEEecccCCCceeecceeEEEEEcC---CCceeee-e---cCC--CCCeEEEEECcCCCEEEEEEccCC-
Q 020756 36 WNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTD---GTHEGLV-P---LRK--EGPVHDVQWSYSGSEFAVVYGFMP- 105 (321)
Q Consensus 36 Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~---g~~~~~v-~---l~~--~~~v~~~~wsP~g~~l~~~~g~~~- 105 (321)
.+|+|+++++.... .++. ...||.++.. +.....+ . +.. ...+..++|||||++|++......
T Consensus 114 p~pdG~~~~~~~~~----~~~~---~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~ 186 (741)
T 1yr2_A 114 PQRRGASVFYSWNS----GLMN---QSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS 186 (741)
T ss_dssp CEEETTEEEEEEEC----SSCS---SCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC
T ss_pred CEEECCEEEEEEEc----CCCe---EEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC
Confidence 35999999887432 1211 1347888765 4433332 1 222 236889999999999998753211
Q ss_pred --CeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCC-----------CCcEEEEECCCCe----EEEeeeC
Q 020756 106 --ASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNL-----------PGDMAFWDYVDGK----QLGTTRA 166 (321)
Q Consensus 106 --~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~-----------~g~i~iwD~~~~~----~i~~~~~ 166 (321)
..|.+||+.+...... +...+..+.|||| +.|+++..... ...|++|++.++. ++.....
T Consensus 187 e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 187 DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred ceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 3799999976644433 2223367999999 99998873221 3359999997664 3333322
Q ss_pred C--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc--e-e--EEeccCceEEEEEecCCCCCC
Q 020756 167 E--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS--L-F--FKKMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 167 ~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~--~-l--~~~~~~~~~~~~w~P~~~~~~ 227 (321)
+ .+..+.|||||++|+..+.... ...+.+++||+.+. . + ...+....... |.|++..++
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~ 331 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGT-DPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLW 331 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTT-CSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccC-CCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEE
Confidence 2 4678999999999998874210 01457999998543 2 2 22233333333 336665544
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.06 E-value=1.5e-08 Score=101.75 Aligned_cols=161 Identities=9% Similarity=0.031 Sum_probs=99.9
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee-eeecCCCCCeEEEEECcCCCEEEEEEccC----
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG-LVPLRKEGPVHDVQWSYSGSEFAVVYGFM---- 104 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~-~v~l~~~~~v~~~~wsP~g~~l~~~~g~~---- 104 (321)
....+.|||||++|++..+. +|. ....|+++++.++... ...+. .....+++|+|||+.|++.....
T Consensus 122 ~~~~~~~SPDG~~la~~~~~----~G~---~~~~i~v~dl~tg~~~~~~~~~-~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKP----NAA---DEAVLHVIDVDSGEWSKVDVIE-GGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEE----TTC---SCCEEEEEETTTCCBCSSCCBS-CCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred EEEEEEECCCCCEEEEEECC----CCC---ceEEEEEEECCCCCCcCCcccC-cccccceEEecCCCEEEEEEecCCCCC
Confidence 35678999999999997543 221 1235889998776332 11111 11126899999999998874321
Q ss_pred -------CCeEEEEeCCCce---eEEe----CCcCeeeEEEcCCCCeEEEEccCC-CCCcEEEEECCCCeEEEeeeCC-C
Q 020756 105 -------PASATIFNKKCRP---ILEL----GSGPYNTVRWNPKGKFLCLAGFGN-LPGDMAFWDYVDGKQLGTTRAE-C 168 (321)
Q Consensus 105 -------~~~i~i~d~~~~~---~~~~----~~~~~~~~~~sPdG~~l~~~g~~n-~~g~i~iwD~~~~~~i~~~~~~-~ 168 (321)
+..|.+|++.+.. ...+ +...+..+.|||||++|++.+... ....|++||..+++........ .
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 273 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA 273 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc
Confidence 2359999996432 2222 234678899999999999876221 1237888877655433333232 4
Q ss_pred eeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 169 SVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 169 ~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
.....| ++|. |+..+... ..+..|.+|++.
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~--~~~~~l~~~d~~ 303 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEG--APRQRVFEVDPA 303 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTT--CTTCEEEEEBTT
T ss_pred eEEEEe-cCCc-EEEEECCC--CCCCEEEEEeCC
Confidence 455556 7888 66665421 124678888884
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.06 E-value=5e-08 Score=87.13 Aligned_cols=179 Identities=10% Similarity=0.104 Sum_probs=130.5
Q ss_pred CCceEEEEEcCCcCCCCceeeeeccc-CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 3 SPASVQIYACGKDLQSQPLARRSFFR-CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 3 ~p~~v~v~~~~~~~~~~~i~~~~~f~-~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
..+.|.+|+..+ ++.+.+..... .....+.++|+|+.++ . +...++.++..|...-.+....
T Consensus 13 ~~~~v~~~d~~t---G~~~w~~~~~~~~~~~~~~~~pdG~ilv-s-------------~~~~V~~~d~~G~~~W~~~~~~ 75 (276)
T 3no2_A 13 GWNKIAIINKDT---KEIVWEYPLEKGWECNSVAATKAGEILF-S-------------YSKGAKMITRDGRELWNIAAPA 75 (276)
T ss_dssp TCSEEEEEETTT---TEEEEEEECCTTCCCCEEEECTTSCEEE-E-------------CBSEEEEECTTSCEEEEEECCT
T ss_pred CCCEEEEEECCC---CeEEEEeCCCccCCCcCeEECCCCCEEE-e-------------CCCCEEEECCCCCEEEEEcCCC
Confidence 467899999878 78887777654 3567788999998665 2 1123667776554333344333
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC--C------cCeeeEEEcCCCCeEEEEccCCCCCcEEEE
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG--S------GPYNTVRWNPKGKFLCLAGFGNLPGDMAFW 153 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~--~------~~~~~~~~sPdG~~l~~~g~~n~~g~i~iw 153 (321)
...++++.+.|+|+.+++..+. .+.+..+|.+++.+..+. . .....+.+.++|++|++.. .++.|..|
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~-~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~---~~~~v~~~ 151 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGH-PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF---ATSEVREI 151 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEEST-TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET---TTTEEEEE
T ss_pred CccccccEECCCCCEEEEecCC-CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec---CCCEEEEE
Confidence 3578899999999988875432 557888888888776652 1 1344578899999998877 67999999
Q ss_pred ECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEEe
Q 020756 154 DYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFKK 209 (321)
Q Consensus 154 D~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~~ 209 (321)
|.+ ++.+-.+... ....+...++|+.++++.. ++.|..+|.. |+.+.+.
T Consensus 152 d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~------~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 152 APN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGD------AHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp CTT-SCEEEEEECSSCCCEEEECTTSCEEEECBT------TSEEEEECTTTCCEEEEE
T ss_pred CCC-CCEEEEEECCCCccceeEcCCCCEEEEeCC------CCeEEEEeCcCCcEEEEe
Confidence 997 9888887764 5667788999999888773 5578888887 8887444
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.04 E-value=3.6e-08 Score=87.88 Aligned_cols=196 Identities=11% Similarity=0.030 Sum_probs=119.1
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEc-CCCceeeeecC---
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTT-DGTHEGLVPLR--- 80 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~-~g~~~~~v~l~--- 80 (321)
+.|.+|+... + +............+.++++|+.++.. . +...|+.++. .+.........
T Consensus 50 ~~i~~~~~~~---~--~~~~~~~~~~~~~l~~~~dg~l~v~~-~-----------~~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 50 NRTWAWSDDG---Q--LSPEMHPSHHQNGHCLNKQGHLIACS-H-----------GLRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp TEEEEEETTS---C--EEEEESSCSSEEEEEECTTCCEEEEE-T-----------TTTEEEEECSTTCCEEEEECEETTE
T ss_pred CEEEEEECCC---C--eEEEECCCCCcceeeECCCCcEEEEe-c-----------CCCeEEEEcCCCCcEEEEeeccCCC
Confidence 4566666554 3 33333333445678899998854332 0 2234677776 44322211110
Q ss_pred CCCCeEEEEECcCCCEEEEEE--ccC-------------CCeEEEEeCCCceeEEe-CCcCeeeEEEcCCCCeEEEEccC
Q 020756 81 KEGPVHDVQWSYSGSEFAVVY--GFM-------------PASATIFNKKCRPILEL-GSGPYNTVRWNPKGKFLCLAGFG 144 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~--g~~-------------~~~i~i~d~~~~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~ 144 (321)
....+++++++|+|+.+++-. |.+ .+.|..++..+...... +....+.++|+|+|+.|++..
T Consensus 113 ~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~-- 190 (296)
T 3e5z_A 113 KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDT-- 190 (296)
T ss_dssp ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEET--
T ss_pred CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeC--
Confidence 123567899999998666521 221 24677777664332222 445678999999999994444
Q ss_pred CCCCcEEEEECC-CCeE---EEeee--CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEe--ccCceEE
Q 020756 145 NLPGDMAFWDYV-DGKQ---LGTTR--AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKK--MFDKLFQ 216 (321)
Q Consensus 145 n~~g~i~iwD~~-~~~~---i~~~~--~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~--~~~~~~~ 216 (321)
.++.|++||+. +++. ...+. ...+..++++++|+++++ + +++|.+|+.+|+.+... +.. +.+
T Consensus 191 -~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~-~-------~~~v~~~~~~g~~~~~~~~~~~-~~~ 260 (296)
T 3e5z_A 191 -GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWAS-A-------GDGVHVLTPDGDELGRVLTPQT-TSN 260 (296)
T ss_dssp -TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEE-E-------TTEEEEECTTSCEEEEEECSSC-CCE
T ss_pred -CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEE-c-------CCeEEEECCCCCEEEEEECCCC-cee
Confidence 56899999986 4544 22331 124567999999985544 4 57899999999877443 333 788
Q ss_pred EEEe-cCCCCCCCC
Q 020756 217 AEWK-PVSPDKFGD 229 (321)
Q Consensus 217 ~~w~-P~~~~~~~~ 229 (321)
+.|. |+...++-.
T Consensus 261 ~~f~~~d~~~L~v~ 274 (296)
T 3e5z_A 261 LCFGGPEGRTLYMT 274 (296)
T ss_dssp EEEESTTSCEEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 8884 676666643
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.04 E-value=3.1e-08 Score=90.22 Aligned_cols=203 Identities=12% Similarity=0.098 Sum_probs=127.1
Q ss_pred ceEEEEEcCCcCCCCceeeeecc-cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec----
Q 020756 5 ASVQIYACGKDLQSQPLARRSFF-RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL---- 79 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f-~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l---- 79 (321)
+.|.+|+..+ ++.+....-. -.....+.++++|+ |++.. . +...|+.++.++.......+
T Consensus 69 ~~i~~~d~~~---g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d-~----------~~~~v~~~~~~g~~~~~~~~~~~~ 133 (329)
T 3fvz_A 69 DTILVIDPNN---AEILQSSGKNLFYLPHGLSIDTDGN-YWVTD-V----------ALHQVFKLDPHSKEGPLLILGRSM 133 (329)
T ss_dssp CCEEEECTTT---CCEEEEECTTTCSSEEEEEECTTSC-EEEEE-T----------TTTEEEEECTTCSSCCSEEESBTT
T ss_pred CcEEEEECCC---CeEEeccCCCccCCceEEEECCCCC-EEEEE-C----------CCCEEEEEeCCCCeEEEEEecccC
Confidence 4688888766 4443222100 12455788999998 44431 1 22346777776652122222
Q ss_pred ------CCCCCeEEEEECc-CCCEEEEEEccCCCeEEEEeCCCceeEEeCC------------cCeeeEEEcCCCCeEEE
Q 020756 80 ------RKEGPVHDVQWSY-SGSEFAVVYGFMPASATIFNKKCRPILELGS------------GPYNTVRWNPKGKFLCL 140 (321)
Q Consensus 80 ------~~~~~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~~------------~~~~~~~~sPdG~~l~~ 140 (321)
.+.....+++++| +|..+++ .+...+.|.+||..+..+..+.. .....++++|++..|++
T Consensus 134 ~~g~~~~~~~~P~~ia~~~~~g~lyv~-d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v 212 (329)
T 3fvz_A 134 QPGSDQNHFCQPTDVAVEPSTGAVFVS-DGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV 212 (329)
T ss_dssp BCCCSTTCCSSEEEEEECTTTCCEEEE-ECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE
T ss_pred CCCCCccccCCCcEEEEeCCCCeEEEE-eCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE
Confidence 2233678999999 5654444 22357799999988887777731 12678999999555555
Q ss_pred EccCCCCCcEEEEECCCCeEEEeeeCC----CeeeEEEccCCCEEEEEEcCC-ceeecCcEEEEee-cCceeEE-----e
Q 020756 141 AGFGNLPGDMAFWDYVDGKQLGTTRAE----CSVTSEWSPDGRYFMTATTAP-RLQIDNGIKIFHH-NGSLFFK-----K 209 (321)
Q Consensus 141 ~g~~n~~g~i~iwD~~~~~~i~~~~~~----~~~~~~wSpdG~~l~t~~s~~-rl~~d~~v~iw~~-~g~~l~~-----~ 209 (321)
+.. .++.|.+||.++++.+..+... .+..++|+| |..++..+... --..++.+++|++ +|+++.. .
T Consensus 213 ~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~ 289 (329)
T 3fvz_A 213 ADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK 289 (329)
T ss_dssp EET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS
T ss_pred EEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC
Confidence 543 4589999999889888877432 577899999 44444333100 0002558999996 5776644 3
Q ss_pred ccCceEEEEEecCCCCCC
Q 020756 210 MFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 210 ~~~~~~~~~w~P~~~~~~ 227 (321)
+......++++|++ .+|
T Consensus 290 ~~~~p~~ia~~~dG-~ly 306 (329)
T 3fvz_A 290 HFDMPHDIVASEDG-TVY 306 (329)
T ss_dssp CCSSEEEEEECTTS-EEE
T ss_pred ccCCeeEEEECCCC-CEE
Confidence 45578899999988 444
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.01 E-value=4.7e-08 Score=88.36 Aligned_cols=177 Identities=11% Similarity=0.063 Sum_probs=111.9
Q ss_pred cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEcc--CCCeE
Q 020756 31 TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGF--MPASA 108 (321)
Q Consensus 31 ~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~--~~~~i 108 (321)
...+.|+++|+ |+++. + ....|+.++..+.....+.......+.+++|+|+|+.++...+. ..+.|
T Consensus 47 ~~~~~~~~~g~-l~~~~-~----------~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 47 LEGLNFDRQGQ-LFLLD-V----------FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI 114 (333)
T ss_dssp EEEEEECTTSC-EEEEE-T----------TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred ccCcEECCCCC-EEEEE-C----------CCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence 45778999988 43321 1 12247888776654444333456789999999999866664221 11589
Q ss_pred EEEeCCCceeEEe-----CCcCeeeEEEcCCCCeEEEEccC---CCCCcEEEEECCCCeEEEeeeC-CCeeeEEEccCCC
Q 020756 109 TIFNKKCRPILEL-----GSGPYNTVRWNPKGKFLCLAGFG---NLPGDMAFWDYVDGKQLGTTRA-ECSVTSEWSPDGR 179 (321)
Q Consensus 109 ~i~d~~~~~~~~~-----~~~~~~~~~~sPdG~~l~~~g~~---n~~g~i~iwD~~~~~~i~~~~~-~~~~~~~wSpdG~ 179 (321)
.+||..+..+..+ ....++.+.++|+|++++....+ +..+.|+.+|.++++....... ..+..++|+|||+
T Consensus 115 ~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp EEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSS
T ss_pred EEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCC
Confidence 9999876654422 23467899999999877765411 0135688888766544332222 2567899999999
Q ss_pred EEEEEEcCCceeecCcEEEEee--cCceeEE------ecc---CceEEEEEecCCC
Q 020756 180 YFMTATTAPRLQIDNGIKIFHH--NGSLFFK------KMF---DKLFQAEWKPVSP 224 (321)
Q Consensus 180 ~l~t~~s~~rl~~d~~v~iw~~--~g~~l~~------~~~---~~~~~~~w~P~~~ 224 (321)
+|+.+.+ .++.|.+|++ .|..+.. ... .....+.+.+++.
T Consensus 195 ~l~v~~~-----~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~ 245 (333)
T 2dg1_A 195 VLWVTET-----TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN 245 (333)
T ss_dssp EEEEEEG-----GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC
T ss_pred EEEEEeC-----CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC
Confidence 8777664 3788999999 4443311 011 2456677777764
No 186
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.97 E-value=5.1e-08 Score=98.07 Aligned_cols=208 Identities=12% Similarity=0.116 Sum_probs=124.6
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCce---eecceeEEEEEcCCCcee--eeec
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQS---YYGESKLNYLTTDGTHEG--LVPL 79 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s---~~g~~~l~~l~~~g~~~~--~v~l 79 (321)
..|+|+++.+ ++.+. ..+.......+.|+ ||+.|++....+. .+.. ......||++.+...... .+.-
T Consensus 155 ~~i~v~dl~t---g~~~~-~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~--~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~ 227 (693)
T 3iuj_A 155 REIHLMDVES---KQPLE-TPLKDVKFSGISWL-GNEGFFYSSYDKP--DGSELSARTDQHKVYFHRLGTAQEDDRLVFG 227 (693)
T ss_dssp EEEEEEETTT---CSEEE-EEEEEEESCCCEEE-TTTEEEEEESSCC--C-------CCCCEEEEEETTSCGGGCEEEES
T ss_pred EEEEEEECCC---CCCCc-cccCCceeccEEEe-CCCEEEEEEecCc--ccccccccCCCcEEEEEECCCCcccceEEEe
Confidence 4688899887 55433 23333224578999 9999988743211 0000 012335788777554332 2221
Q ss_pred C---CCCCeEEEEECcCCCEEEEEEc--cCCCeEEEEeCCCc--eeEEe--CCcCeeeEEEcCCCCeEEEEccCC-CCCc
Q 020756 80 R---KEGPVHDVQWSYSGSEFAVVYG--FMPASATIFNKKCR--PILEL--GSGPYNTVRWNPKGKFLCLAGFGN-LPGD 149 (321)
Q Consensus 80 ~---~~~~v~~~~wsP~g~~l~~~~g--~~~~~i~i~d~~~~--~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n-~~g~ 149 (321)
. +...+.++.|||||++|++... .....+.++|+... ....+ +....... |+|+|..|++.+..+ ..+.
T Consensus 228 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~ 306 (693)
T 3iuj_A 228 AIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRR 306 (693)
T ss_dssp CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCE
T ss_pred cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCE
Confidence 1 1224678999999999887643 23358999998543 34444 33333333 788888777765222 2478
Q ss_pred EEEEECCCCeE--EEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecC--cEEEEeecCceeEEecc---CceEEEEEe
Q 020756 150 MAFWDYVDGKQ--LGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDN--GIKIFHHNGSLFFKKMF---DKLFQAEWK 220 (321)
Q Consensus 150 i~iwD~~~~~~--i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~--~v~iw~~~g~~l~~~~~---~~~~~~~w~ 220 (321)
|..+|+.++.. ...+..+ .+. .|+++|++|+.... .+. .|++|+++|..+..... ..+..+.++
T Consensus 307 l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~-----~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~ 379 (693)
T 3iuj_A 307 LVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYM-----VDATARVEQFDYEGKRVREVALPGLGSVSGFNGK 379 (693)
T ss_dssp EEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEE-----ETTEEEEEEECTTSCEEEEECCSSSSEEEECCCC
T ss_pred EEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEE-----ECCeeEEEEEECCCCeeEEeecCCCceEEeeecC
Confidence 99999987643 1222222 333 99999999998874 232 68889988876644332 245566777
Q ss_pred cCCCCCC
Q 020756 221 PVSPDKF 227 (321)
Q Consensus 221 P~~~~~~ 227 (321)
|+...++
T Consensus 380 ~d~~~l~ 386 (693)
T 3iuj_A 380 HDDPALY 386 (693)
T ss_dssp TTCSCEE
T ss_pred CCCCEEE
Confidence 7666544
No 187
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.95 E-value=1.4e-07 Score=95.59 Aligned_cols=207 Identities=10% Similarity=0.016 Sum_probs=123.1
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCc--e---eecceeEEEEEcCCCce--eee
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQ--S---YYGESKLNYLTTDGTHE--GLV 77 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~--s---~~g~~~l~~l~~~g~~~--~~v 77 (321)
..|+||++.. ++.+. ..........+.|+|| +.|++... +.... . ......||++++.+... ..+
T Consensus 189 ~~i~v~dl~t---g~~~~-~~~~~~~~~~~~wspD-~~l~~~~~---~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv 260 (741)
T 1yr2_A 189 RTVKFVGVAD---GKPLA-DELKWVKFSGLAWLGN-DALLYSRF---AEPKEGQAFQALNYNQTVWLHRLGTPQSADQPV 260 (741)
T ss_dssp EEEEEEETTT---CCEEE-EEEEEEESCCCEESTT-SEEEEEEC---CCC--------CCCCCEEEEEETTSCGGGCEEE
T ss_pred EEEEEEECCC---CCCCC-ccCCCceeccEEEECC-CEEEEEEe---cCcccccccccCCCCCEEEEEECCCCchhCEEE
Confidence 4688999887 55433 2322222357899999 98888642 11110 0 00023478887755432 222
Q ss_pred ecCC--CCCeEEEEECcCCCEEEEEEccC---CCeEEEEeCCCc--e-eEEe--CCcCeeeEEEcCCCCeEEEEccCC-C
Q 020756 78 PLRK--EGPVHDVQWSYSGSEFAVVYGFM---PASATIFNKKCR--P-ILEL--GSGPYNTVRWNPKGKFLCLAGFGN-L 146 (321)
Q Consensus 78 ~l~~--~~~v~~~~wsP~g~~l~~~~g~~---~~~i~i~d~~~~--~-~~~~--~~~~~~~~~~sPdG~~l~~~g~~n-~ 146 (321)
.-.. ...+.++.|||||++|++..... ...+.+||+.+. . ...+ +....... ++|+|+.|++.+..+ .
T Consensus 261 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~ 339 (741)
T 1yr2_A 261 FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAP 339 (741)
T ss_dssp ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCT
T ss_pred eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCC
Confidence 2122 23588999999999998875432 348999998654 3 4444 33334344 459999998876322 2
Q ss_pred CCcEEEEECCCC--eEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee--cCceeEEec---cCceEEE
Q 020756 147 PGDMAFWDYVDG--KQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH--NGSLFFKKM---FDKLFQA 217 (321)
Q Consensus 147 ~g~i~iwD~~~~--~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~--~g~~l~~~~---~~~~~~~ 217 (321)
++.|++||+.++ .....+..+ .+..+.|+ ++.++++.. .|+..+||.+ +|..+.... ...+..+
T Consensus 340 ~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~------~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~ 412 (741)
T 1yr2_A 340 LKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYI------HDAKSQVLAFDLDGKPAGAVSLPGIGSASGL 412 (741)
T ss_dssp TCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEE------ETTEEEEEEEETTSCEEEECBCSSSCEEEEE
T ss_pred CCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEE------ECCEEEEEEEeCCCCceeeccCCCCeEEEEe
Confidence 567999999874 333333333 23456776 444455554 3666666654 577654433 3457788
Q ss_pred EEecCCCCCC
Q 020756 218 EWKPVSPDKF 227 (321)
Q Consensus 218 ~w~P~~~~~~ 227 (321)
.|+|+...++
T Consensus 413 ~~s~d~~~l~ 422 (741)
T 1yr2_A 413 SGRPGDRHAY 422 (741)
T ss_dssp ECCBTCSCEE
T ss_pred ecCCCCCEEE
Confidence 9999877665
No 188
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.95 E-value=4.1e-07 Score=82.82 Aligned_cols=175 Identities=13% Similarity=0.063 Sum_probs=111.8
Q ss_pred CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee-cCC---CCCeEEEEECcCCCEEEEEEcc-
Q 020756 29 CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP-LRK---EGPVHDVQWSYSGSEFAVVYGF- 103 (321)
Q Consensus 29 ~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~-l~~---~~~v~~~~wsP~g~~l~~~~g~- 103 (321)
.....+.|+++|+.++.. ...|+.++..++....+. ... ...++++.++|+|+.++...+.
T Consensus 90 ~~v~~i~~~~dg~l~v~~--------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~ 155 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS--------------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK 155 (326)
T ss_dssp SCEEEEEEEETTEEEEEE--------------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT
T ss_pred CcceEEEEeCCCeEEEEE--------------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc
Confidence 456678888888765542 113777876544333222 111 2358899999999865543221
Q ss_pred ---CCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC--CC-e-----EEEeeeC--CC
Q 020756 104 ---MPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV--DG-K-----QLGTTRA--EC 168 (321)
Q Consensus 104 ---~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~--~~-~-----~i~~~~~--~~ 168 (321)
..+.|..+| .+. +..+ +....+.+.|+|||+.|+++.. ..+.|++||++ ++ + .+..+.. ..
T Consensus 156 ~~~~~~~l~~~~-~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~--~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~ 231 (326)
T 2ghs_A 156 AETGAGSIYHVA-KGK-VTKLFADISIPNSICFSPDGTTGYFVDT--KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGG 231 (326)
T ss_dssp CCTTCEEEEEEE-TTE-EEEEEEEESSEEEEEECTTSCEEEEEET--TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSE
T ss_pred CCCCceEEEEEe-CCc-EEEeeCCCcccCCeEEcCCCCEEEEEEC--CCCEEEEEEcccccCCcccCceEEEECCCCCCC
Confidence 124666677 443 3222 2345688999999998877652 35799999986 55 2 2323321 24
Q ss_pred eeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEe--ccCceEEEEEe-cCCCCCC
Q 020756 169 SVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKK--MFDKLFQAEWK-PVSPDKF 227 (321)
Q Consensus 169 ~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~--~~~~~~~~~w~-P~~~~~~ 227 (321)
...+.++++|+++++... +++|.+|+.+|+.+... ....+..++|. |+...++
T Consensus 232 p~gi~~d~~G~lwva~~~------~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 232 MDGSVCDAEGHIWNARWG------EGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLL 287 (326)
T ss_dssp EEEEEECTTSCEEEEEET------TTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEE
T ss_pred CCeeEECCCCCEEEEEeC------CCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEE
Confidence 566899999987766652 67899999988876443 33468899998 7766665
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.94 E-value=1.6e-07 Score=83.61 Aligned_cols=173 Identities=12% Similarity=-0.026 Sum_probs=110.3
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASAT 109 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~ 109 (321)
..-.+.|+|+|+.|+++.. ....|+.++..+. ...+. .+...+..++++|+|+.++.. ...+.|.
T Consensus 29 ~~eg~~~d~~g~~l~~~~~-----------~~~~i~~~~~~~~-~~~~~-~~~~~~~~l~~~~dg~l~v~~--~~~~~i~ 93 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDV-----------RQNRTWAWSDDGQ-LSPEM-HPSHHQNGHCLNKQGHLIACS--HGLRRLE 93 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEG-----------GGTEEEEEETTSC-EEEEE-SSCSSEEEEEECTTCCEEEEE--TTTTEEE
T ss_pred cccCCeEeCCCCEEEEEeC-----------CCCEEEEEECCCC-eEEEE-CCCCCcceeeECCCCcEEEEe--cCCCeEE
Confidence 3457899999997766521 1224788888776 33333 355678999999999966553 4456899
Q ss_pred EEeCCCceeEEe----C---CcCeeeEEEcCCCCeEEEEc---c-----------CCCCCcEEEEECCCCeEEEeeeCC-
Q 020756 110 IFNKKCRPILEL----G---SGPYNTVRWNPKGKFLCLAG---F-----------GNLPGDMAFWDYVDGKQLGTTRAE- 167 (321)
Q Consensus 110 i~d~~~~~~~~~----~---~~~~~~~~~sPdG~~l~~~g---~-----------~n~~g~i~iwD~~~~~~i~~~~~~- 167 (321)
+||.+...+..+ . ...++.+.++|+|+++++.. . ....+.|+.+|.. ++........
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV 172 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC
Confidence 999844333332 1 23457899999999887631 1 0013577777776 5433333322
Q ss_pred CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec--Cce-----eEEeccCceEEEEEecCCC
Q 020756 168 CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN--GSL-----FFKKMFDKLFQAEWKPVSP 224 (321)
Q Consensus 168 ~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~--g~~-----l~~~~~~~~~~~~w~P~~~ 224 (321)
....++|+|||++| .+.+ .++.|.+|++. |.+ ++.........+.+.+++.
T Consensus 173 ~~~gi~~s~dg~~l-v~~~-----~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDT-----GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL 230 (296)
T ss_dssp SEEEEEECTTSCEE-EEET-----TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC
T ss_pred CCccEEECCCCCEE-EEeC-----CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC
Confidence 56789999999999 4443 37889999984 444 1211222344567777664
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.92 E-value=5.9e-07 Score=80.43 Aligned_cols=179 Identities=11% Similarity=0.080 Sum_probs=112.7
Q ss_pred cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee-ecC---CCCCeEEEEECcCCCEEEEEEcc
Q 020756 28 RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV-PLR---KEGPVHDVQWSYSGSEFAVVYGF 103 (321)
Q Consensus 28 ~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v-~l~---~~~~v~~~~wsP~g~~l~~~~g~ 103 (321)
......+.|+++|+. ++.. ...|+.++..+.....+ ... ....++++.++|+|+.++...+.
T Consensus 53 ~~~~~~i~~~~dG~l-~v~~-------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 53 DAPVSSVALRQSGGY-VATI-------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAE 118 (297)
T ss_dssp SSCEEEEEEBTTSSE-EEEE-------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEEC
T ss_pred CCceEEEEECCCCCE-EEEE-------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCc
Confidence 345667899999993 3321 12367777654432222 221 12347899999999966543221
Q ss_pred ---------CCCeEEEEeCCCceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEEC--CCCeE-----EEeeeC
Q 020756 104 ---------MPASATIFNKKCRPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDY--VDGKQ-----LGTTRA 166 (321)
Q Consensus 104 ---------~~~~i~i~d~~~~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~--~~~~~-----i~~~~~ 166 (321)
..+.+..+|..+...... +....+.++|+|||+.|+++.. ..+.|++||+ .++.. +..+..
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~ 196 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEK 196 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCG
T ss_pred ccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecC--CCCcEEEEeccCCCCcccCcEEEEECCC
Confidence 112455555554433222 3345688999999998877652 3578999987 45532 222222
Q ss_pred --CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEEec--cCceEEEEEe-cCCCCCCC
Q 020756 167 --ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFKKM--FDKLFQAEWK-PVSPDKFG 228 (321)
Q Consensus 167 --~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~~~--~~~~~~~~w~-P~~~~~~~ 228 (321)
.....++++++|++.++... .+.|.+||.. |+++.... ...+.+++|. |+...+|-
T Consensus 197 ~~~~p~g~~~d~~G~lwva~~~------~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 197 EEQIPDGMCIDAEGKLWVACYN------GGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp GGCEEEEEEEBTTSCEEEEEET------TTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEE
T ss_pred CCCCCCeeEECCCCCEEEEEcC------CCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEE
Confidence 24567899999987666652 6779999986 88775443 3578899998 88776663
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.92 E-value=5.1e-07 Score=88.89 Aligned_cols=177 Identities=12% Similarity=0.110 Sum_probs=122.1
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcC---CCceeeeecC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTD---GTHEGLVPLR 80 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~---g~~~~~v~l~ 80 (321)
.+.|.|++..+ ++.+.+..... ....+.+||||+++++.. . ...|+.++.. +.....+.
T Consensus 176 ~~~V~viD~~t---~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~-----~-------dg~V~viD~~~~t~~~v~~i~-- 237 (567)
T 1qks_A 176 AGQIALIDGST---YEIKTVLDTGY-AVHISRLSASGRYLFVIG-----R-------DGKVNMIDLWMKEPTTVAEIK-- 237 (567)
T ss_dssp TTEEEEEETTT---CCEEEEEECSS-CEEEEEECTTSCEEEEEE-----T-------TSEEEEEETTSSSCCEEEEEE--
T ss_pred CCeEEEEECCC---CeEEEEEeCCC-CccceEECCCCCEEEEEc-----C-------CCeEEEEECCCCCCcEeEEEe--
Confidence 46899999988 67776666543 334789999999988742 1 1137777773 22223333
Q ss_pred CCCCeEEEEEC----cCCCEEEEEEccCCCeEEEEeCCC-ceeEEeC-------------CcCeeeEEEcCCCCeEEEEc
Q 020756 81 KEGPVHDVQWS----YSGSEFAVVYGFMPASATIFNKKC-RPILELG-------------SGPYNTVRWNPKGKFLCLAG 142 (321)
Q Consensus 81 ~~~~v~~~~ws----P~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~~-------------~~~~~~~~~sPdG~~l~~~g 142 (321)
.......++|| |||+++++. ...++.+.++|... +.+..+. ...+..+..|+++..+++.-
T Consensus 238 ~G~~P~~ia~s~~~~pDGk~l~v~-n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 238 IGSEARSIETSKMEGWEDKYAIAG-AYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEE-EEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred cCCCCceeEEccccCCCCCEEEEE-EccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 23345789999 799998886 45678999999854 4444431 11466788999887666654
Q ss_pred cCCCCCcEEEEECCCCe--EEEeeeC-CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-Ccee
Q 020756 143 FGNLPGDMAFWDYVDGK--QLGTTRA-ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLF 206 (321)
Q Consensus 143 ~~n~~g~i~iwD~~~~~--~i~~~~~-~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l 206 (321)
...|.|.++|..+.+ .+..+.. .....+.|+|||+||+++.. .++.|.++|.. ++++
T Consensus 317 --~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 317 --KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLV 377 (567)
T ss_dssp --TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEE
T ss_pred --cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEE
Confidence 156899999987653 2333333 35667899999999998885 48999999985 4444
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.89 E-value=4.3e-08 Score=91.95 Aligned_cols=127 Identities=9% Similarity=-0.063 Sum_probs=93.7
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc---eeEEeCCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR---PILELGSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD 157 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~---~~~~~~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~ 157 (321)
... |+.++| |+..|+++ .++.|.+||+... .....+...++++.+.+.. ++++. .+|.|.+||+.+
T Consensus 87 lp~-V~~l~f--d~~~L~v~---~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~---~dG~L~v~dl~~ 155 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS---TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILN---SVNDLSALDLRT 155 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE---ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEE---TTSEEEEEETTT
T ss_pred CCC-eeEEEE--CCCEEEEE---cCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEE---CCCCEEEEEccC
Confidence 445 999999 99999986 4579999998432 1222356678888777653 66666 789999999998
Q ss_pred CeEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeE---Ee-----------ccCceEEEEEecCC
Q 020756 158 GKQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFF---KK-----------MFDKLFQAEWKPVS 223 (321)
Q Consensus 158 ~~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~---~~-----------~~~~~~~~~w~P~~ 223 (321)
+..... ...+++++|||+| ++.+. .|+.+++|+..+..+. .. +...+.++.|.++.
T Consensus 156 ~~~~~~--~~~Vs~v~WSpkG--~~vg~------~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 156 KSTKQL--AQNVTSFDVTNSQ--LAVLL------KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp CCEEEE--EESEEEEEECSSE--EEEEE------TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred Cccccc--cCCceEEEEcCCc--eEEEE------cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence 876542 2489999999999 56666 4999999999877642 11 34568899999876
Q ss_pred CCCCC
Q 020756 224 PDKFG 228 (321)
Q Consensus 224 ~~~~~ 228 (321)
..++.
T Consensus 226 ~flv~ 230 (388)
T 1xip_A 226 DFLAV 230 (388)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 65553
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.88 E-value=6.5e-07 Score=78.01 Aligned_cols=173 Identities=8% Similarity=0.035 Sum_probs=113.9
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASAT 109 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~ 109 (321)
....+.++++|+ |++.. . ...|+.++..+.....+.......+.+++++|+|+.++. ....+.|.
T Consensus 68 ~p~~i~~~~~g~-l~v~~---~---------~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~--~~~~~~i~ 132 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VYVTD---F---------NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVA--DRGNNRVV 132 (270)
T ss_dssp SCCCEEECTTCC-EEEEE---T---------TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEE--EGGGTEEE
T ss_pred CcceeEECCCCC-EEEEc---C---------CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEE--ECCCCEEE
Confidence 455788888887 44431 0 124777777765433333333357899999999984444 23456899
Q ss_pred EEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeC--CCeeeEEEccCCCEEEEE
Q 020756 110 IFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA--ECSVTSEWSPDGRYFMTA 184 (321)
Q Consensus 110 i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~--~~~~~~~wSpdG~~l~t~ 184 (321)
+|+......... +....+.+.++|+|+++++.. .++.|.+||............ ..+..++++++|..+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~---~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDT---DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp EECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEG---GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred EEECCCceeEeeccccCCCceeEEEeCCCCEEEEEC---CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEE
Confidence 998654333222 234578899999999666654 457999999987655433222 367789999999665555
Q ss_pred EcCCceeecCcEEEEeecCceeEEe---ccCceEEEEEecCCCCCC
Q 020756 185 TTAPRLQIDNGIKIFHHNGSLFFKK---MFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 185 ~s~~rl~~d~~v~iw~~~g~~l~~~---~~~~~~~~~w~P~~~~~~ 227 (321)
. .++.|.+|+..+...... .......+.+.|++. ++
T Consensus 210 ~------~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~ 248 (270)
T 1rwi_B 210 H------NTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT-VY 248 (270)
T ss_dssp T------TTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC-EE
T ss_pred C------CCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC-EE
Confidence 4 377899999987654332 234678899999875 44
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.87 E-value=5e-07 Score=82.31 Aligned_cols=199 Identities=8% Similarity=-0.016 Sum_probs=127.8
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce-eeeecCCC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE-GLVPLRKE 82 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~-~~v~l~~~ 82 (321)
.+.|.+++..+ ++.+.+.... .....+.++++| .|++... ....|+.++...... ..+.+...
T Consensus 63 ~~~v~viD~~t---~~~~~~i~~~-~~p~~i~~~~~g-~lyv~~~-----------~~~~v~~iD~~t~~~~~~i~~g~~ 126 (328)
T 3dsm_A 63 SHVIFAIDINT---FKEVGRITGF-TSPRYIHFLSDE-KAYVTQI-----------WDYRIFIINPKTYEITGYIECPDM 126 (328)
T ss_dssp GTEEEEEETTT---CCEEEEEECC-SSEEEEEEEETT-EEEEEEB-----------SCSEEEEEETTTTEEEEEEECTTC
T ss_pred CCEEEEEECcc---cEEEEEcCCC-CCCcEEEEeCCC-eEEEEEC-----------CCCeEEEEECCCCeEEEEEEcCCc
Confidence 36788898887 6666655432 456678888888 5555321 123477777765432 23443321
Q ss_pred ----CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEeC-CcCeeeEEEcCCCCeEEEEccCCC--------CC
Q 020756 83 ----GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILELG-SGPYNTVRWNPKGKFLCLAGFGNL--------PG 148 (321)
Q Consensus 83 ----~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~~-~~~~~~~~~sPdG~~l~~~g~~n~--------~g 148 (321)
.....+++ ++..+.++....++.|.++|.... .+..+. ....+.+.++|+|++++++. ++. .+
T Consensus 127 ~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~-~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 127 DMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITD-GGYEGSPYGYEAP 203 (328)
T ss_dssp CTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBC-CBCTTCSSCBCCC
T ss_pred cccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEEC-CCccCCccccCCc
Confidence 13456777 456666652113679999999654 444442 23456899999999766654 110 27
Q ss_pred cEEEEECCCCeEEEeeeC---CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE-e--c--cCceEEEEEe
Q 020756 149 DMAFWDYVDGKQLGTTRA---ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK-K--M--FDKLFQAEWK 220 (321)
Q Consensus 149 ~i~iwD~~~~~~i~~~~~---~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~-~--~--~~~~~~~~w~ 220 (321)
.|.++|..+++.+..+.. .....++|+|||++|.++. . .+.+||.....+.. . . ....+.+.+.
T Consensus 204 ~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~-------~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN-------N-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES-------S-SEEEEETTCSSCCSSCSBCCCSSCEEEEEEC
T ss_pred eEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc-------c-EEEEEECCCCceeeeeeecCCCCceEEEEEc
Confidence 899999999987766653 2578899999999988765 2 78889985433311 1 1 3467889999
Q ss_pred cCCCCCCCC
Q 020756 221 PVSPDKFGD 229 (321)
Q Consensus 221 P~~~~~~~~ 229 (321)
|+...+|-.
T Consensus 276 p~~g~lyva 284 (328)
T 3dsm_A 276 PNNGEVYVA 284 (328)
T ss_dssp TTTCCEEEE
T ss_pred CCCCeEEEE
Confidence 977777643
No 195
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.85 E-value=7.6e-07 Score=80.91 Aligned_cols=181 Identities=12% Similarity=0.126 Sum_probs=115.3
Q ss_pred CccceEEeCCCCCeeEEEEEecccCC-------Ccee-------ecceeEEEEEcC-CCceeeeecCCCCCeEEEEECcC
Q 020756 29 CSTVQLNWNRGSTGLLAVAQSDVDKT-------NQSY-------YGESKLNYLTTD-GTHEGLVPLRKEGPVHDVQWSYS 93 (321)
Q Consensus 29 ~~~~~~~Wsp~G~~l~~~~~~d~d~t-------~~s~-------~g~~~l~~l~~~-g~~~~~v~l~~~~~v~~~~wsP~ 93 (321)
.....+.++++|+.++.. ..+ ... ...+ .....|+.++.. +.........+....++++++|+
T Consensus 24 ~~v~~va~d~~G~l~v~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFH-RGD-HVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp SCEEEEEECTTCCEEEEE-CTT-CCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred CCceEEEECCCCCEEEEe-CCC-CeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 456788999999765432 111 000 0000 011247777775 43222222123457889999999
Q ss_pred CCEEEEEEccCCCeEEEEeCCCc--eeEEeCC-----------cCeeeEEEcC-CCCeEEEEccCCCCCcEEEEECCCCe
Q 020756 94 GSEFAVVYGFMPASATIFNKKCR--PILELGS-----------GPYNTVRWNP-KGKFLCLAGFGNLPGDMAFWDYVDGK 159 (321)
Q Consensus 94 g~~l~~~~g~~~~~i~i~d~~~~--~~~~~~~-----------~~~~~~~~sP-dG~~l~~~g~~n~~g~i~iwD~~~~~ 159 (321)
|+.+++ +...+.|.+||..+. .+..++. ...+.++++| +|+++++.++ .++.|.+||. +++
T Consensus 102 g~l~v~--d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~--~~~~I~~~~~-~g~ 176 (329)
T 3fvz_A 102 GNYWVT--DVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY--CNSRIVQFSP-SGK 176 (329)
T ss_dssp SCEEEE--ETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS--SCCEEEEECT-TSC
T ss_pred CCEEEE--ECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC--CCCeEEEEcC-CCC
Confidence 995444 455679999999776 5666631 2467899999 7777776642 2589999995 666
Q ss_pred EEEeeeC------------CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEEe----ccCceEEEEEec
Q 020756 160 QLGTTRA------------ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFKK----MFDKLFQAEWKP 221 (321)
Q Consensus 160 ~i~~~~~------------~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~~----~~~~~~~~~w~P 221 (321)
.+..+.. .....++++|++..|..+.. .++.|++|+.. |+++... ....++.+.++|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-----~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-----ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-----TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-----CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 6665532 13678999999444444443 37889999997 8877544 234688899998
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.84 E-value=6.6e-07 Score=79.70 Aligned_cols=178 Identities=16% Similarity=0.141 Sum_probs=111.3
Q ss_pred CccceEEeCCC-CCeeEEEEEecccCCCceeecceeEEEEEcCCCceee-eecC---CCCCeEEEEECcCCCEEEEEEcc
Q 020756 29 CSTVQLNWNRG-STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGL-VPLR---KEGPVHDVQWSYSGSEFAVVYGF 103 (321)
Q Consensus 29 ~~~~~~~Wsp~-G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~-v~l~---~~~~v~~~~wsP~g~~l~~~~g~ 103 (321)
.....+.++++ |+ |++... ...|+.++..+..... .... ....++++.++|+|+.++...+.
T Consensus 71 ~~~~~i~~~~~~g~-l~v~~~------------~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 71 GIPAGCQCDRDANQ-LFVADM------------RLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp CCEEEEEECSSSSE-EEEEET------------TTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred CCCceEEEecCCCc-EEEEEC------------CCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCc
Confidence 44667888888 54 333210 1147777776432211 1111 12357899999999866553221
Q ss_pred C-------------CCeEEEEeCCCceeEEe-CCcCeeeEEEc----CCCCeEEEEccCCCCCcEEEEECC-CCe-----
Q 020756 104 M-------------PASATIFNKKCRPILEL-GSGPYNTVRWN----PKGKFLCLAGFGNLPGDMAFWDYV-DGK----- 159 (321)
Q Consensus 104 ~-------------~~~i~i~d~~~~~~~~~-~~~~~~~~~~s----PdG~~l~~~g~~n~~g~i~iwD~~-~~~----- 159 (321)
. .+.+..||..+...... +....+.+.|+ |+|+.|.++.. .++.|.+||++ +++
T Consensus 138 ~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~ 215 (314)
T 1pjx_A 138 EVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKK 215 (314)
T ss_dssp BCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEE
T ss_pred ccccccccccccCCCCeEEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccce
Confidence 0 14677788764332222 33456789999 99987776652 35799999986 453
Q ss_pred EEEeeeC---CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEE--eccCceEEEEEecCCCCCC
Q 020756 160 QLGTTRA---ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFK--KMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 160 ~i~~~~~---~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~--~~~~~~~~~~w~P~~~~~~ 227 (321)
.+..+.. .....++++++|+++++... ++.|.+|+.. |+.+.. .+...+..+.+.|+...++
T Consensus 216 ~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~------~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 216 VWGHIPGTHEGGADGMDFDEDNNLLVANWG------SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp EEEECCCCSSCEEEEEEEBTTCCEEEEEET------TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEE
T ss_pred EEEECCCCCCCCCCceEECCCCCEEEEEcC------CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEE
Confidence 2222322 23567999999998777763 7889999987 765532 3335788899988876555
No 197
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.82 E-value=1.2e-07 Score=95.33 Aligned_cols=182 Identities=12% Similarity=0.086 Sum_probs=109.3
Q ss_pred ceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCC-eEEEEECcCCCEEEEEEccC------
Q 020756 32 VQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGP-VHDVQWSYSGSEFAVVYGFM------ 104 (321)
Q Consensus 32 ~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~-v~~~~wsP~g~~l~~~~g~~------ 104 (321)
..+.|||||++|++..+ ..|... ..|+++++.++......+. +. ...++|+ ||+.|+++....
T Consensus 132 ~~~~~SpDg~~lAy~~~----~~G~~~---~~i~v~dl~tg~~~~~~~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLS----LAGSDW---REIHLMDVESKQPLETPLK--DVKFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEECTTSSEEEEEEE----CSSCCE---EEEEEEETTTCSEEEEEEE--EEESCCCEEE-TTTEEEEEESSCCC----
T ss_pred EEEEECCCCCEEEEEEe----cCCCce---EEEEEEECCCCCCCccccC--CceeccEEEe-CCCEEEEEEecCcccccc
Confidence 35689999999999743 233321 3588889877643332211 11 3568999 999999875432
Q ss_pred -----CCeEEEEeCCCce---eEEeC--C---cCeeeEEEcCCCCeEEEEcc-CCCCCcEEEEECCCCe-EEEeeeCC-C
Q 020756 105 -----PASATIFNKKCRP---ILELG--S---GPYNTVRWNPKGKFLCLAGF-GNLPGDMAFWDYVDGK-QLGTTRAE-C 168 (321)
Q Consensus 105 -----~~~i~i~d~~~~~---~~~~~--~---~~~~~~~~sPdG~~l~~~g~-~n~~g~i~iwD~~~~~-~i~~~~~~-~ 168 (321)
+.+|.+|++.+.. ...+. . .....+.|||||++|++... +.....|+++|+.++. ....+..+ .
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 2469999985432 23332 1 23578999999999987643 2234699999997662 22223222 2
Q ss_pred eeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-e----eEEeccCceEEEEEecCCCCCC
Q 020756 169 SVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-L----FFKKMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 169 ~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~----l~~~~~~~~~~~~w~P~~~~~~ 227 (321)
.....|+++|..|+..+.... ....|.++++.+. . ....+...+. .|+|+...++
T Consensus 282 ~~~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv 341 (693)
T 3iuj_A 282 ADVSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLF 341 (693)
T ss_dssp SCEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEE
T ss_pred ceEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEE
Confidence 222238999888887775210 1245777777542 1 1222333333 7777766554
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.77 E-value=1.1e-06 Score=86.56 Aligned_cols=177 Identities=10% Similarity=0.001 Sum_probs=120.2
Q ss_pred eEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEe
Q 020756 33 QLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFN 112 (321)
Q Consensus 33 ~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d 112 (321)
...|+.|...+++++.. +...+..++..... ..-.+.....++.+.+||||++++++ +.++.|.+||
T Consensus 158 ~~~~~~d~~~~~~V~~~----------~~~~V~viD~~t~~-v~~~i~~g~~p~~v~~SpDGr~lyv~--~~dg~V~viD 224 (567)
T 1qks_A 158 QQMNDWDLENLFSVTLR----------DAGQIALIDGSTYE-IKTVLDTGYAVHISRLSASGRYLFVI--GRDGKVNMID 224 (567)
T ss_dssp SCCSCCCGGGEEEEEET----------TTTEEEEEETTTCC-EEEEEECSSCEEEEEECTTSCEEEEE--ETTSEEEEEE
T ss_pred ccccccCCCceEEEEeC----------CCCeEEEEECCCCe-EEEEEeCCCCccceEECCCCCEEEEE--cCCCeEEEEE
Confidence 34567665555554322 23347788876542 22223334567899999999998886 4578999999
Q ss_pred C---CCceeEEeC-CcCeeeEEEc----CCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC-------------Ceee
Q 020756 113 K---KCRPILELG-SGPYNTVRWN----PKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE-------------CSVT 171 (321)
Q Consensus 113 ~---~~~~~~~~~-~~~~~~~~~s----PdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~-------------~~~~ 171 (321)
+ ..+.+.++. ......+.|| |||++++++.. ..++|.++|..+++.+..+... .+..
T Consensus 225 ~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~--~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~ 302 (567)
T 1qks_A 225 LWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY--WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA 302 (567)
T ss_dssp TTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE--ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE
T ss_pred CCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEc--cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEE
Confidence 9 445556662 2234578999 79999999873 4589999999999887765421 3556
Q ss_pred EEEccCCCEEEEEEcCCceeecCcEEEEeecCc-ee--EE-eccCceEEEEEecCCCCCCCC
Q 020756 172 SEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LF--FK-KMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 172 ~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l--~~-~~~~~~~~~~w~P~~~~~~~~ 229 (321)
+..|+++..++.... .++.+.++|+... .+ .. ..-..+.++.|+|+..+++..
T Consensus 303 i~~s~~~~~~vv~~~-----~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 303 ILASHYRPEFIVNVK-----ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp EEECSSSSEEEEEET-----TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred EEEcCCCCEEEEEec-----CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 888999877776664 4788999998542 11 11 223467789999998887754
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.75 E-value=4.8e-06 Score=77.50 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=51.6
Q ss_pred EEEcCCCCeEEEEccC-------CCCCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCC-EEEEEEcCCceeecCcEEEE
Q 020756 129 VRWNPKGKFLCLAGFG-------NLPGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGR-YFMTATTAPRLQIDNGIKIF 199 (321)
Q Consensus 129 ~~~sPdG~~l~~~g~~-------n~~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~-~l~t~~s~~rl~~d~~v~iw 199 (321)
+.++|||+.|.++... ...+.|.++|+.+++.+..+... ....+.|||||+ +++++.. .++.|.++
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~-----~~~~V~Vi 346 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSA-----GTEVLHIY 346 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcC-----CCCeEEEE
Confidence 4566666666554310 01357999999999988888654 588899999999 4555442 37899999
Q ss_pred eec-CceeE
Q 020756 200 HHN-GSLFF 207 (321)
Q Consensus 200 ~~~-g~~l~ 207 (321)
|.. ++.+.
T Consensus 347 D~~t~~vv~ 355 (373)
T 2mad_H 347 DAGAGDQDQ 355 (373)
T ss_pred ECCCCCEEe
Confidence 985 44443
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.74 E-value=2.9e-06 Score=79.99 Aligned_cols=176 Identities=9% Similarity=0.023 Sum_probs=106.2
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee-ee-e--cC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG-LV-P--LR 80 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~-~v-~--l~ 80 (321)
+.|++|+... +........+. ... +.|+++|+.|++.. . . +...|+.++..+.... .+ . ..
T Consensus 152 ~~I~~id~~~---g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d---~--~-----~~~~I~~~d~~~~~~~~~~g~~~~~ 216 (409)
T 3hrp_A 152 PRVRLISVDD---NKVTTVHPGFK-GGK-PAVTKDKQRVYSIG---W--E-----GTHTVYVYMKASGWAPTRIGQLGST 216 (409)
T ss_dssp TEEEEEETTT---TEEEEEEETCC-BCB-CEECTTSSEEEEEB---S--S-----TTCEEEEEEGGGTTCEEEEEECCTT
T ss_pred CcEEEEECCC---CEEEEeeccCC-CCc-eeEecCCCcEEEEe---c--C-----CCceEEEEEcCCCceeEEeeeccch
Confidence 5677777765 33322222222 233 89999999877641 1 1 1125777777654321 11 0 11
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe------CCc---CeeeEEEcCCCCeEEEEccCCCCCcEE
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL------GSG---PYNTVRWNPKGKFLCLAGFGNLPGDMA 151 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~------~~~---~~~~~~~sPdG~~l~~~g~~n~~g~i~ 151 (321)
....+++++++|++..|.++ ...+.|..||..+.....+ +.. +.+.++|+|++..|.++.. ..+.|+
T Consensus 217 ~~~~p~~iav~p~~g~lyv~--d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~--~~~~I~ 292 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFV--DSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ--NLSSVY 292 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEE--CTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET--TTTEEE
T ss_pred hcCCcEEEEEeCCCCeEEEE--ECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC--CCCEEE
Confidence 34567899999965666664 3467899999875544333 111 2238999997666666553 457899
Q ss_pred EEECCCCeEEEeeeC----------------CCeeeEEEccCCCEEEEEE-cCCceeecCcEEEEee-cCcee
Q 020756 152 FWDYVDGKQLGTTRA----------------ECSVTSEWSPDGRYFMTAT-TAPRLQIDNGIKIFHH-NGSLF 206 (321)
Q Consensus 152 iwD~~~~~~i~~~~~----------------~~~~~~~wSpdG~~l~t~~-s~~rl~~d~~v~iw~~-~g~~l 206 (321)
.||.+.. ....... .....++++|+|+++++-+ . ++.|+.|++ +|...
T Consensus 293 ~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~------~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 293 KITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK------GYCLRKLDILDGYVS 358 (409)
T ss_dssp EECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT------TCEEEEEETTTTEEE
T ss_pred EEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC------CCEEEEEECCCCEEE
Confidence 9998644 2211111 1366799999999555543 3 778999994 56543
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.73 E-value=1.2e-06 Score=76.22 Aligned_cols=153 Identities=7% Similarity=0.019 Sum_probs=96.5
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASAT 109 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~ 109 (321)
....+.++++|+ |++.. . +...|+.++................+.+++++|+|+.++. ....+.|.
T Consensus 109 ~p~~i~~~~~g~-l~v~~-~----------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~--~~~~~~i~ 174 (270)
T 1rwi_B 109 YPEGLAVDTQGA-VYVAD-R----------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVT--DTDNNRVV 174 (270)
T ss_dssp SEEEEEECTTCC-EEEEE-G----------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEE--EGGGTEEE
T ss_pred CCcceEECCCCC-EEEEE-C----------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEE--ECCCCEEE
Confidence 345677777776 33321 0 2234666644332111111122346788999999984444 23456899
Q ss_pred EEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee-C-CCeeeEEEccCCCEEEEE
Q 020756 110 IFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR-A-ECSVTSEWSPDGRYFMTA 184 (321)
Q Consensus 110 i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~-~-~~~~~~~wSpdG~~l~t~ 184 (321)
+||..+...... +......+.++|+|++++... .++.|.+||........... . ..+..+++++||+.+++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~---~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 175 KLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEH---NTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp EECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEET---TTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEE
T ss_pred EEecCCCceEeecccCCCCceEEEECCCCCEEEEEC---CCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEE
Confidence 999977655443 235678899999996666654 46789999987654333222 2 257889999999866665
Q ss_pred EcCCceeecCcEEEEeecCce
Q 020756 185 TTAPRLQIDNGIKIFHHNGSL 205 (321)
Q Consensus 185 ~s~~rl~~d~~v~iw~~~g~~ 205 (321)
. .++.|+++++....
T Consensus 252 ~------~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 252 R------GNDRVVKLTSLEHH 266 (270)
T ss_dssp G------GGTEEEEECCCGGG
T ss_pred C------CCCEEEEEcCCCcc
Confidence 5 48899999876443
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.71 E-value=3.1e-07 Score=86.11 Aligned_cols=157 Identities=7% Similarity=-0.004 Sum_probs=102.9
Q ss_pred CCceEEEEEcCCcC--------CCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCce
Q 020756 3 SPASVQIYACGKDL--------QSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHE 74 (321)
Q Consensus 3 ~p~~v~v~~~~~~~--------~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~ 74 (321)
.|..+.||++.... .-++.....+.+ ...+.| +|..|++. .+ |. |+.+++.....
T Consensus 56 ~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~--V~~l~f--d~~~L~v~--~~---------~~--l~v~dv~sl~~ 118 (388)
T 1xip_A 56 SGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD--VIFVCF--HGDQVLVS--TR---------NA--LYSLDLEELSE 118 (388)
T ss_dssp ETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT--EEEEEE--ETTEEEEE--ES---------SE--EEEEESSSTTC
T ss_pred CCCEEEEEEhhHhhhhhccccccccceEEeeCCC--eeEEEE--CCCEEEEE--cC---------Cc--EEEEEchhhhc
Confidence 35567778765421 012223333333 788999 88888875 11 22 45555433222
Q ss_pred eeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeCCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEE
Q 020756 75 GLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELGSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWD 154 (321)
Q Consensus 75 ~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD 154 (321)
......++.++.++.|.+.. |+++ ..++.+.+||++......+ ...+.+++|||+| ++++. .+|.|.+|+
T Consensus 119 ~~~~~~~~~~v~~i~~~~p~--~av~--~~dG~L~v~dl~~~~~~~~-~~~Vs~v~WSpkG--~~vg~---~dg~i~~~~ 188 (388)
T 1xip_A 119 FRTVTSFEKPVFQLKNVNNT--LVIL--NSVNDLSALDLRTKSTKQL-AQNVTSFDVTNSQ--LAVLL---KDRSFQSFA 188 (388)
T ss_dssp EEEEEECSSCEEEEEECSSE--EEEE--ETTSEEEEEETTTCCEEEE-EESEEEEEECSSE--EEEEE---TTSCEEEEE
T ss_pred cCccceeecceeeEEecCCC--EEEE--ECCCCEEEEEccCCccccc-cCCceEEEEcCCc--eEEEE---cCCcEEEEc
Confidence 22222356678898887653 7765 5689999999975544333 4689999999999 55665 679999999
Q ss_pred CCCCeE--EEee------e-----CCCeeeEEEccCCCEEEEEEc
Q 020756 155 YVDGKQ--LGTT------R-----AECSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 155 ~~~~~~--i~~~------~-----~~~~~~~~wSpdG~~l~t~~s 186 (321)
...+++ ..++ . ...+..+.|.++++++++-..
T Consensus 189 ~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 189 WRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp EETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred CCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 987775 5555 2 236888999999999987553
No 203
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.70 E-value=8.6e-07 Score=79.58 Aligned_cols=181 Identities=12% Similarity=0.115 Sum_probs=108.8
Q ss_pred cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecC---CCCCeEEEEECcCCCEEEEEE--c
Q 020756 28 RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLR---KEGPVHDVQWSYSGSEFAVVY--G 102 (321)
Q Consensus 28 ~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~---~~~~v~~~~wsP~g~~l~~~~--g 102 (321)
......+.|+++|+.+ ++.. +...|+.++.++......... ....++++.++|+|+.+++-. |
T Consensus 85 ~~~~~gl~~d~dG~l~-v~~~-----------~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g 152 (305)
T 3dr2_A 85 TAFTNGNAVDAQQRLV-HCEH-----------GRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFG 152 (305)
T ss_dssp CSCEEEEEECTTSCEE-EEET-----------TTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGG
T ss_pred CCccceeeECCCCCEE-EEEC-----------CCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCC
Confidence 3456678889988743 3311 223466666665422221110 123467899999998666410 2
Q ss_pred cC-------------CCeEEEEeCCCceeEEe-CCcCeeeEEEcCCCCeEEEEccCC---CCCcEEEEECCCCeE-----
Q 020756 103 FM-------------PASATIFNKKCRPILEL-GSGPYNTVRWNPKGKFLCLAGFGN---LPGDMAFWDYVDGKQ----- 160 (321)
Q Consensus 103 ~~-------------~~~i~i~d~~~~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n---~~g~i~iwD~~~~~~----- 160 (321)
.+ .+.|..||.+...+..+ +....+.++|+|||+.|+++.... ..+.|++||+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 232 (305)
T 3dr2_A 153 LRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH 232 (305)
T ss_dssp GSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE
T ss_pred ccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE
Confidence 21 24677788743322222 334567899999999888876321 026899999875531
Q ss_pred EEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEecc-CceEEEEEecCCCCCCC
Q 020756 161 LGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKKMF-DKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 161 i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~~~-~~~~~~~w~P~~~~~~~ 228 (321)
+..........+.++++|++ .+++ .++|.+|+.+|+.+..... ..+.++.|.|+...++-
T Consensus 233 ~~~~~~~~pdgi~~d~~G~l-wv~~-------~~gv~~~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 233 FASVPDGLPDGFCVDRGGWL-WSSS-------GTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFI 293 (305)
T ss_dssp EECCSSSCCCSEEECTTSCE-EECC-------SSEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEE
T ss_pred EEECCCCCCCeEEECCCCCE-EEec-------CCcEEEECCCCCEEEEEECCCceeEEEEeCCCCEEEE
Confidence 11111123456899999994 4444 3469999999988744433 35788899877665653
No 204
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.70 E-value=3.2e-06 Score=78.11 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=67.5
Q ss_pred EEECcCCCEEEEEEc-c--------CCCeEEEEeCCC-ceeEEeC-CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC
Q 020756 88 VQWSYSGSEFAVVYG-F--------MPASATIFNKKC-RPILELG-SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV 156 (321)
Q Consensus 88 ~~wsP~g~~l~~~~g-~--------~~~~i~i~d~~~-~~~~~~~-~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~ 156 (321)
++++|+|+++.++.. . ....+.+||+.. +.+.++. .. ...+.|+|||++|++++ . +.|.+||..
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n---~-~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD---G-GNVNVYDIS 333 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC---S-SCEEEEECS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC---C-CeEEEEECC
Confidence 688999888877532 1 134899999965 4555552 23 88999999999988876 4 899999999
Q ss_pred CC--eEEEeeeC--CCeeeEEEccCCC
Q 020756 157 DG--KQLGTTRA--ECSVTSEWSPDGR 179 (321)
Q Consensus 157 ~~--~~i~~~~~--~~~~~~~wSpdG~ 179 (321)
++ +.+..+.. .....+.++|||+
T Consensus 334 t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 334 QPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99 99988633 3678899999997
No 205
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.70 E-value=2.4e-06 Score=77.78 Aligned_cols=184 Identities=9% Similarity=-0.043 Sum_probs=113.8
Q ss_pred CceEEEEEcCCcCCCCceeeeeccc-----CccceEEeCCCCCeeEEEEEecccCCCceeec-ceeEEEEEcCCCc-eee
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFR-----CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYG-ESKLNYLTTDGTH-EGL 76 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~-----~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g-~~~l~~l~~~g~~-~~~ 76 (321)
.+.|.+|+..+ ++.+....... .....+.+ ++..|++.. ++ ...|+.++..... ...
T Consensus 104 ~~~v~~iD~~t---~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~-----------~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 104 DYRIFIINPKT---YEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNC-----------WSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp CSEEEEEETTT---TEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEE-----------CTTCCEEEEEETTTTEEEEE
T ss_pred CCeEEEEECCC---CeEEEEEEcCCccccCCCcceEEE--ECCEEEEEc-----------CCCCCEEEEEECCCCeEEEE
Confidence 46778888776 45444444322 03345566 566665541 11 3357778775442 233
Q ss_pred eecCCCCCeEEEEECcCCCEEEEEEccC--------CCeEEEEeCCCcee-EEe--C-CcCeeeEEEcCCCCeEEEEccC
Q 020756 77 VPLRKEGPVHDVQWSYSGSEFAVVYGFM--------PASATIFNKKCRPI-LEL--G-SGPYNTVRWNPKGKFLCLAGFG 144 (321)
Q Consensus 77 v~l~~~~~v~~~~wsP~g~~l~~~~g~~--------~~~i~i~d~~~~~~-~~~--~-~~~~~~~~~sPdG~~l~~~g~~ 144 (321)
+.+ ....+++.++|+|+.+++..+.. .+.+.++|.....+ ..+ . ....+.++|+|+|++|.++.
T Consensus 168 i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~-- 243 (328)
T 3dsm_A 168 LTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN-- 243 (328)
T ss_dssp EEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES--
T ss_pred EEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc--
Confidence 332 34457899999998666643321 26899999865433 344 2 23678999999999999876
Q ss_pred CCCCcEEEEECCCCeEEEe--ee--CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEecc
Q 020756 145 NLPGDMAFWDYVDGKQLGT--TR--AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKKMF 211 (321)
Q Consensus 145 n~~g~i~iwD~~~~~~i~~--~~--~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~~~ 211 (321)
. .|++||..+++.... +. ......++++|++..|..+.. .-...++.|.+||.+|+++.....
T Consensus 244 -~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~-~~y~~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 244 -N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADA-IDYQQQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp -S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEEC-TTSSSEEEEEEECTTCCEEEEEEE
T ss_pred -c--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcc-cccccCCEEEEECCCCCEEEEEEe
Confidence 3 899999988765321 22 235677999995444444430 000037889999999888755433
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.66 E-value=3.9e-06 Score=74.99 Aligned_cols=148 Identities=12% Similarity=0.099 Sum_probs=94.8
Q ss_pred ceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEE
Q 020756 32 VQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIF 111 (321)
Q Consensus 32 ~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~ 111 (321)
..+.++++|+.++........ ..........||.++.++..... .......+.++|+|||+.|+++. ...+.|.+|
T Consensus 101 ~di~~d~dG~l~~~~~~~~~~-~~~~~~~~~~l~~~d~~g~~~~~--~~~~~~pngi~~spdg~~lyv~~-~~~~~i~~~ 176 (297)
T 3g4e_A 101 NDGKVDPAGRYFAGTMAEETA-PAVLERHQGALYSLFPDHHVKKY--FDQVDISNGLDWSLDHKIFYYID-SLSYSVDAF 176 (297)
T ss_dssp EEEEECTTSCEEEEEEECCSB-TTBCCTTCEEEEEECTTSCEEEE--EEEESBEEEEEECTTSCEEEEEE-GGGTEEEEE
T ss_pred CCEEECCCCCEEEecCCcccc-cccccCCCcEEEEEECCCCEEEE--eeccccccceEEcCCCCEEEEec-CCCCcEEEE
Confidence 457788888843322111000 00000122358888776543222 12334567899999999887763 445789999
Q ss_pred eCC--Cce------eEEeC--CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEc-cCC
Q 020756 112 NKK--CRP------ILELG--SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWS-PDG 178 (321)
Q Consensus 112 d~~--~~~------~~~~~--~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wS-pdG 178 (321)
|+. ... +..+. ......+.+.++|++.+... ..+.|.+||.++++.+..+..+ .+++++|+ ||+
T Consensus 177 ~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~---~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 177 DYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY---NGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp EECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE---TTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred eccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc---CCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 863 211 22332 24567799999998766654 4578999999989888877765 68899998 999
Q ss_pred CEEEEEEc
Q 020756 179 RYFMTATT 186 (321)
Q Consensus 179 ~~l~t~~s 186 (321)
+.|..++.
T Consensus 254 ~~L~vt~~ 261 (297)
T 3g4e_A 254 SEMYVTCA 261 (297)
T ss_dssp CEEEEEEB
T ss_pred CEEEEEcC
Confidence 88877764
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.66 E-value=3e-06 Score=80.39 Aligned_cols=192 Identities=5% Similarity=-0.076 Sum_probs=118.9
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eeeeecC--C
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGLVPLR--K 81 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~v~l~--~ 81 (321)
+.|.+++..+ .+.+.+....... .+.+||||++|++...- ..... .-.+...|..++..... ...+.+. .
T Consensus 99 ~~VsVID~~t---~~vv~~I~vG~~P--gia~SpDgk~lyVan~~-~~~~~-~G~~~~~VsviD~~t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGST---GRILGMTDGGFLP--HPVAAEDGSFFAQASTV-FERIA-RGKRTDYVEVFDPVTFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTT---TEEEEEEEECSSC--EEEECTTSSCEEEEEEE-EEETT-EEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CeEEEEECCC---CEEEEEEECCCCC--ceEECCCCCEEEEEecc-ccccc-cCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence 7899999988 7888888776654 89999999999886310 00000 00023357777764432 2334443 1
Q ss_pred ----CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEeCC---------c-----------------------
Q 020756 82 ----EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILELGS---------G----------------------- 124 (321)
Q Consensus 82 ----~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~~~---------~----------------------- 124 (321)
...-+.+.++|||+++++......+.|.++|+... .+.++.- +
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v 251 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGET 251 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCC
T ss_pred ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcE
Confidence 12356789999999988863222467888887432 1111100 0
Q ss_pred --------------------------------------------------------------------CeeeEEEcCCCC
Q 020756 125 --------------------------------------------------------------------PYNTVRWNPKGK 136 (321)
Q Consensus 125 --------------------------------------------------------------------~~~~~~~sPdG~ 136 (321)
....+.++|+|+
T Consensus 252 ~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~ 331 (426)
T 3c75_H 252 KVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSD 331 (426)
T ss_dssp EEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGT
T ss_pred EEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCC
Confidence 000145666666
Q ss_pred eEEEEcc-C------CCCCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCC-EEEEEEcCCceeecCcEEEEeec-Ccee
Q 020756 137 FLCLAGF-G------NLPGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGR-YFMTATTAPRLQIDNGIKIFHHN-GSLF 206 (321)
Q Consensus 137 ~l~~~g~-~------n~~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~-~l~t~~s~~rl~~d~~v~iw~~~-g~~l 206 (321)
.|.++.. + ...++|.++|+.+++.+..+.-. ....+.|+|||+ +++++.. .++.|.++|.. ++.+
T Consensus 332 rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~-----~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 332 RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSA-----GTQTLHIYDAATGEEL 406 (426)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEET-----TTTEEEEEETTTCCEE
T ss_pred EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcC-----CCCeEEEEECCCCCEE
Confidence 5555421 0 01246888898888888877654 577899999999 7766663 38999999984 5555
Q ss_pred EE
Q 020756 207 FK 208 (321)
Q Consensus 207 ~~ 208 (321)
..
T Consensus 407 ~t 408 (426)
T 3c75_H 407 RS 408 (426)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.64 E-value=4.4e-06 Score=74.91 Aligned_cols=158 Identities=10% Similarity=-0.015 Sum_probs=100.0
Q ss_pred cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEE
Q 020756 31 TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATI 110 (321)
Q Consensus 31 ~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i 110 (321)
.-.+.|+++|+.|+++. . ....|+.++..+. ...+. .....++.+.|+++|+.++.. ...+.|.+
T Consensus 47 ~egp~~~~~g~~l~~~d-----~------~~~~i~~~~~~g~-~~~~~-~~~~~~~gl~~d~dG~l~v~~--~~~~~v~~ 111 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSD-----L------VGRRVLGWREDGT-VDVLL-DATAFTNGNAVDAQQRLVHCE--HGRRAITR 111 (305)
T ss_dssp EEEEEEEGGGTEEEEEE-----T------TTTEEEEEETTSC-EEEEE-ESCSCEEEEEECTTSCEEEEE--TTTTEEEE
T ss_pred ccCCeEeCCCCEEEEEE-----C------CCCEEEEEeCCCC-EEEEe-CCCCccceeeECCCCCEEEEE--CCCCEEEE
Confidence 34689999999887752 1 1123677777554 22222 345678999999999855542 33468999
Q ss_pred EeCCCceeEEe----C---CcCeeeEEEcCCCCeEEEE---ccC-----------CCCCcEEEEECCCCeEEEeeeCCCe
Q 020756 111 FNKKCRPILEL----G---SGPYNTVRWNPKGKFLCLA---GFG-----------NLPGDMAFWDYVDGKQLGTTRAECS 169 (321)
Q Consensus 111 ~d~~~~~~~~~----~---~~~~~~~~~sPdG~~l~~~---g~~-----------n~~g~i~iwD~~~~~~i~~~~~~~~ 169 (321)
||..+. +..+ . ....+.+.++|+|++.++- |.. ...+.|+.||..+++..........
T Consensus 112 ~~~~g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p 190 (305)
T 3dr2_A 112 SDADGQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHP 190 (305)
T ss_dssp ECTTSC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSE
T ss_pred ECCCCC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCC
Confidence 998754 3322 1 2346789999999977752 110 0135788899876643332222356
Q ss_pred eeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc
Q 020756 170 VTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 170 ~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~ 204 (321)
..++|+|||++|+.+.+.......+.|.+|++.+.
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 77999999998888775210001267899998653
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.61 E-value=3e-06 Score=77.01 Aligned_cols=146 Identities=12% Similarity=-0.024 Sum_probs=96.9
Q ss_pred eEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEe
Q 020756 33 QLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFN 112 (321)
Q Consensus 33 ~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d 112 (321)
.+.|++++..++++.. ....|+.++..+.....+. ....+.++.|+|+|+.++.. ...|.+||
T Consensus 53 gp~~~~~~~~l~~~d~-----------~~~~i~~~d~~~~~~~~~~--~~~~v~~i~~~~dg~l~v~~----~~gl~~~d 115 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNI-----------LERELHELHLASGRKTVHA--LPFMGSALAKISDSKQLIAS----DDGLFLRD 115 (326)
T ss_dssp EEEEETTTTEEEEEEG-----------GGTEEEEEETTTTEEEEEE--CSSCEEEEEEEETTEEEEEE----TTEEEEEE
T ss_pred CCeEeCCCCEEEEEEC-----------CCCEEEEEECCCCcEEEEE--CCCcceEEEEeCCCeEEEEE----CCCEEEEE
Confidence 6789999888777521 1224788887766444443 34679999999999876653 23599999
Q ss_pred CCCceeEEe-C------CcCeeeEEEcCCCCeEEEEccCC---CCCcEEEEECCCCeEEEeeeC-CCeeeEEEccCCCEE
Q 020756 113 KKCRPILEL-G------SGPYNTVRWNPKGKFLCLAGFGN---LPGDMAFWDYVDGKQLGTTRA-ECSVTSEWSPDGRYF 181 (321)
Q Consensus 113 ~~~~~~~~~-~------~~~~~~~~~sPdG~~l~~~g~~n---~~g~i~iwD~~~~~~i~~~~~-~~~~~~~wSpdG~~l 181 (321)
..+..+..+ . ...++.+.++|+|++++...... ..+.|+.+| +++....... .....++|+|||++|
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTG 193 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEE
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEE
Confidence 865544433 1 13578899999999766542100 135677777 4544332222 255679999999988
Q ss_pred EEEEcCCceeecCcEEEEeec
Q 020756 182 MTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 182 ~t~~s~~rl~~d~~v~iw~~~ 202 (321)
+.+.+ .++.|.+|++.
T Consensus 194 yv~~~-----~~~~I~~~d~~ 209 (326)
T 2ghs_A 194 YFVDT-----KVNRLMRVPLD 209 (326)
T ss_dssp EEEET-----TTCEEEEEEBC
T ss_pred EEEEC-----CCCEEEEEEcc
Confidence 77765 36789999974
No 210
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.59 E-value=1.2e-05 Score=71.55 Aligned_cols=159 Identities=9% Similarity=0.069 Sum_probs=105.3
Q ss_pred EEEEEcCCcCCCCceeeeeccc-CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC----
Q 020756 7 VQIYACGKDLQSQPLARRSFFR-CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK---- 81 (321)
Q Consensus 7 v~v~~~~~~~~~~~i~~~~~f~-~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~---- 81 (321)
|..|+. + ++.+.+..... .......+.++|+.++.... ....++.++.+|.....+.+..
T Consensus 58 V~~~d~-~---G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~-----------~~~~v~~vd~~Gk~l~~~~~~~~~~~ 122 (276)
T 3no2_A 58 AKMITR-D---GRELWNIAAPAGCEMQTARILPDGNALVAWCG-----------HPSTILEVNMKGEVLSKTEFETGIER 122 (276)
T ss_dssp EEEECT-T---SCEEEEEECCTTCEEEEEEECTTSCEEEEEES-----------TTEEEEEECTTSCEEEEEEECCSCSS
T ss_pred EEEECC-C---CCEEEEEcCCCCccccccEECCCCCEEEEecC-----------CCCEEEEEeCCCCEEEEEeccCCCCc
Confidence 444444 3 45555544421 23345567777777655321 0234566666555333333221
Q ss_pred -CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC-CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe
Q 020756 82 -EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG-SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK 159 (321)
Q Consensus 82 -~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~-~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~ 159 (321)
....+.+...++|+.+++. ..++.+..||.+++.+.++. ......+...|+|+.|+++. .++.|..+|.++++
T Consensus 123 ~~~~~~~v~~~~~G~~lv~~--~~~~~v~~~d~~G~~~w~~~~~~~~~~~~~~~~g~~~v~~~---~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 123 PHAQFRQINKNKKGNYLVPL--FATSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGDCLVACG---DAHCFVQLNLESNR 197 (276)
T ss_dssp GGGSCSCCEECTTSCEEEEE--TTTTEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEECB---TTSEEEEECTTTCC
T ss_pred ccccccCceECCCCCEEEEe--cCCCEEEEECCCCCEEEEEECCCCccceeEcCCCCEEEEeC---CCCeEEEEeCcCCc
Confidence 1245567889999988774 56789999999988888873 34556778899999998876 56789999999998
Q ss_pred EEEeeeCC--------CeeeEEEccCCCEEEEEE
Q 020756 160 QLGTTRAE--------CSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 160 ~i~~~~~~--------~~~~~~wSpdG~~l~t~~ 185 (321)
.+-.+... .+..+...++|..+++..
T Consensus 198 ~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 198 IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 87776532 256678889999888875
No 211
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.52 E-value=2.8e-05 Score=73.79 Aligned_cols=213 Identities=11% Similarity=0.082 Sum_probs=126.9
Q ss_pred CceEEEEEcCCcCCCCceeeeec-----c-c---CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-c
Q 020756 4 PASVQIYACGKDLQSQPLARRSF-----F-R---CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-H 73 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~-----f-~---~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~ 73 (321)
.++|.|+++.+. ++++...+.+ + + ..-..+..+|+| |++.+.-+. .|. +...+.+++.... -
T Consensus 105 s~~I~viD~~t~-p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~--~g~---~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 105 SSRIYIIDTKPN-PREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNE--EGE---GPGGILMLDHYSFEP 176 (462)
T ss_dssp TCCEEEEECCSC-TTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEET--TSC---SCCEEEEECTTTCCE
T ss_pred CCeEEEEECCCC-CCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCc--CCC---CCCeEEEEECCCCeE
Confidence 367888888642 2444434433 1 1 223456788999 444332221 221 3345788876643 2
Q ss_pred eeeeecC--CCCCeEEEEECcCCCEEEEEE-c----------------cCCCeEEEEeCCC-ceeEEeCCc----CeeeE
Q 020756 74 EGLVPLR--KEGPVHDVQWSYSGSEFAVVY-G----------------FMPASATIFNKKC-RPILELGSG----PYNTV 129 (321)
Q Consensus 74 ~~~v~l~--~~~~v~~~~wsP~g~~l~~~~-g----------------~~~~~i~i~d~~~-~~~~~~~~~----~~~~~ 129 (321)
...+... ..+--+++.|+|+++.+++.. | ....+|.+||+.. +.+.++.-+ ....+
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i 256 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALEL 256 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEE
T ss_pred EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCcccee
Confidence 3333322 123456899999999777742 0 1246999999964 344555221 22345
Q ss_pred EE--cCCCCeEEEEcc---CCCCCcEEEEECCCCe--EEEee--e------------------CCCeeeEEEccCCCEEE
Q 020756 130 RW--NPKGKFLCLAGF---GNLPGDMAFWDYVDGK--QLGTT--R------------------AECSVTSEWSPDGRYFM 182 (321)
Q Consensus 130 ~~--sPdG~~l~~~g~---~n~~g~i~iwD~~~~~--~i~~~--~------------------~~~~~~~~wSpdG~~l~ 182 (321)
.| +|+|+++.++.. .++.++|.+|..+.++ .+..+ . ......+.+||||++|.
T Consensus 257 ~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 257 RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp EECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred EeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 45 999999888763 2245788887765552 11111 1 12456799999999999
Q ss_pred EEEcCCceeecCcEEEEeec----CceeEEeccC----------------ceEEEEEecCCCCCCCC
Q 020756 183 TATTAPRLQIDNGIKIFHHN----GSLFFKKMFD----------------KLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 183 t~~s~~rl~~d~~v~iw~~~----g~~l~~~~~~----------------~~~~~~w~P~~~~~~~~ 229 (321)
++.- ..+.|.+||++ .+++...... .-..+..+|++..+|-.
T Consensus 337 VSnr-----g~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVa 398 (462)
T 2ece_A 337 LSLW-----GIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVT 398 (462)
T ss_dssp EEET-----TTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEE
T ss_pred EEeC-----CCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEE
Confidence 8884 58899999984 2334333322 24678889988877754
No 212
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.49 E-value=0.00013 Score=63.77 Aligned_cols=149 Identities=9% Similarity=-0.034 Sum_probs=99.6
Q ss_pred eEEEEEcCCCceeeeecC-CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEE-e--CCcCeeeEEEcCCCCeE
Q 020756 63 KLNYLTTDGTHEGLVPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILE-L--GSGPYNTVRWNPKGKFL 138 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~-~--~~~~~~~~~~sPdG~~l 138 (321)
.|+.++..+. ...+.+. ....++++.++|+|+.++.. ...+.+.+||..+..... + .....+.+.+.|+|++.
T Consensus 79 ~i~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 155 (299)
T 2z2n_A 79 KIGRITKKGI-IKEYTLPNPDSAPYGITEGPNGDIWFTE--MNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALW 155 (299)
T ss_dssp EEEEECTTSC-EEEEECSSTTCCEEEEEECTTSCEEEEE--TTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEE
T ss_pred eEEEECCCCc-EEEEeCCCcCCCceeeEECCCCCEEEEe--cCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEE
Confidence 4777776654 2333333 34578999999999766553 345689999984433221 2 23567899999999877
Q ss_pred EEEccCCCCCcEEEEECCCCeEEEe-eeC--CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE-e--ccC
Q 020756 139 CLAGFGNLPGDMAFWDYVDGKQLGT-TRA--ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK-K--MFD 212 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~~i~~-~~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~-~--~~~ 212 (321)
+... ..+.|..||. +++.... ... ..+..++++++|+++++.. .++.+.+|+.+|..... . ...
T Consensus 156 v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------~~~~i~~~~~~g~~~~~~~~~~~~ 225 (299)
T 2z2n_A 156 FTEN---QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEI------IGNKIGRITTSGEITEFKIPTPNA 225 (299)
T ss_dssp EEET---TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEET------TTTEEEEECTTCCEEEEECSSTTC
T ss_pred EEeC---CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEcc------CCceEEEECCCCcEEEEECCCCCC
Confidence 7664 4578999999 6654432 222 2577899999999666554 26789999987664422 1 234
Q ss_pred ceEEEEEecCCC
Q 020756 213 KLFQAEWKPVSP 224 (321)
Q Consensus 213 ~~~~~~w~P~~~ 224 (321)
.+..+.+.|++.
T Consensus 226 ~~~~i~~~~~g~ 237 (299)
T 2z2n_A 226 RPHAITAGAGID 237 (299)
T ss_dssp CEEEEEECSTTC
T ss_pred CceeEEECCCCC
Confidence 678888888765
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.49 E-value=1.9e-05 Score=74.36 Aligned_cols=172 Identities=8% Similarity=-0.035 Sum_probs=106.8
Q ss_pred cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEE
Q 020756 31 TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATI 110 (321)
Q Consensus 31 ~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i 110 (321)
...|.|+++|+ |++.. . +...|+.++..+.....+... ....+ ++|+|+|+.|+++.......+.+
T Consensus 133 P~~la~d~~g~-lyv~d-----~------~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~ 198 (409)
T 3hrp_A 133 MWGIAAVGNNT-VLAYQ-----R------DDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYV 198 (409)
T ss_dssp EEEEEECSTTE-EEEEE-----T------TTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEE
T ss_pred ceEEEEeCCCC-EEEEe-----c------CCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEE
Confidence 45677888876 44421 1 223477888776533333222 22334 99999999888763222228888
Q ss_pred EeCCCce-eEEe------CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEe----eeCC---Cee-eEEEc
Q 020756 111 FNKKCRP-ILEL------GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGT----TRAE---CSV-TSEWS 175 (321)
Q Consensus 111 ~d~~~~~-~~~~------~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~----~~~~---~~~-~~~wS 175 (321)
|+..... ...+ .....+.++++|++..|.++. .++.|+.||..++..... .... ... .++|+
T Consensus 199 ~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d---~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD---SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp EEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC---TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEE
T ss_pred EEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE---CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEe
Confidence 8875432 2233 335677899999655566665 568999999987753322 1111 113 89999
Q ss_pred cCCCEEEEEEcCCceeecCcEEEEeecCcee-EEec---------------cCceEEEEEecCCC
Q 020756 176 PDGRYFMTATTAPRLQIDNGIKIFHHNGSLF-FKKM---------------FDKLFQAEWKPVSP 224 (321)
Q Consensus 176 pdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l-~~~~---------------~~~~~~~~w~P~~~ 224 (321)
|++..|..+.. ..+.|+.|+.+|... .... ......+++.|+..
T Consensus 276 p~~g~lyv~d~-----~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 276 FVDSNFYMSDQ-----NLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp TTTTEEEEEET-----TTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred CCCCEEEEEeC-----CCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 97555555554 378899999988643 2222 23477899999876
No 214
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.47 E-value=0.00015 Score=63.29 Aligned_cols=147 Identities=8% Similarity=-0.054 Sum_probs=96.3
Q ss_pred eEEEEEcCCCceeeeecC-CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe----CCcCeeeEEEcCCCCe
Q 020756 63 KLNYLTTDGTHEGLVPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL----GSGPYNTVRWNPKGKF 137 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~----~~~~~~~~~~sPdG~~ 137 (321)
.|+.++..+.. ..+.+. ....++++.++++|+.++.. ...+.+..||..+. +..+ +......+.++|+|++
T Consensus 121 ~i~~~d~~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~i~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~g~l 196 (299)
T 2z2n_A 121 RIGRITDDGKI-REYELPNKGSYPSFITLGSDNALWFTE--NQNNAIGRITESGD-ITEFKIPTPASGPVGITKGNDDAL 196 (299)
T ss_dssp EEEEECTTCCE-EEEECSSTTCCEEEEEECTTSCEEEEE--TTTTEEEEECTTCC-EEEEECSSTTCCEEEEEECTTSSE
T ss_pred eEEEECCCCCE-EEecCCCCCCCCceEEEcCCCCEEEEe--CCCCEEEEEcCCCc-EEEeeCCCCCCcceeEEECCCCCE
Confidence 57777764442 233322 34568999999999766552 44568999998443 3332 2345778999999997
Q ss_pred EEEEccCCCCCcEEEEECCCCeEEEe-eeC--CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE-e--cc
Q 020756 138 LCLAGFGNLPGDMAFWDYVDGKQLGT-TRA--ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK-K--MF 211 (321)
Q Consensus 138 l~~~g~~n~~g~i~iwD~~~~~~i~~-~~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~-~--~~ 211 (321)
.+... ..+.|.+||. +++.... ... ..+..+.++++|+.+++... ++.|.+||.+|..... . ..
T Consensus 197 ~v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~~g~~~~~~~~~~~ 266 (299)
T 2z2n_A 197 WFVEI---IGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWG------ANKIGRLTSNNIIEEYPIQIKS 266 (299)
T ss_dssp EEEET---TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT------TTEEEEEETTTEEEEEECSSSS
T ss_pred EEEcc---CCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccC------CceEEEECCCCceEEEeCCCCC
Confidence 66654 4678999999 6654332 221 26778999999996655532 7889999987754321 1 22
Q ss_pred CceEEEEEecCCC
Q 020756 212 DKLFQAEWKPVSP 224 (321)
Q Consensus 212 ~~~~~~~w~P~~~ 224 (321)
..+..+.+ ++..
T Consensus 267 ~~~~~i~~-~~g~ 278 (299)
T 2z2n_A 267 AEPHGICF-DGET 278 (299)
T ss_dssp CCEEEEEE-CSSC
T ss_pred CccceEEe-cCCC
Confidence 46777777 6544
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.46 E-value=9.7e-06 Score=72.00 Aligned_cols=130 Identities=11% Similarity=0.089 Sum_probs=88.2
Q ss_pred eeEEEEEcCCCceeeeecCCCCCeEEEEEC----cCCCEEEEEEccCCCeEEEEeCC--Cc-----eeEEeCC---cCee
Q 020756 62 SKLNYLTTDGTHEGLVPLRKEGPVHDVQWS----YSGSEFAVVYGFMPASATIFNKK--CR-----PILELGS---GPYN 127 (321)
Q Consensus 62 ~~l~~l~~~g~~~~~v~l~~~~~v~~~~ws----P~g~~l~~~~g~~~~~i~i~d~~--~~-----~~~~~~~---~~~~ 127 (321)
..|+.++..+..... .......+.++|+ |+|+.+.++ ....+.|.+||.+ +. ....+.. ....
T Consensus 153 ~~l~~~~~~g~~~~~--~~~~~~~~~i~~~~~~d~dg~~l~v~-~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 229 (314)
T 1pjx_A 153 GSIYCFTTDGQMIQV--DTAFQFPNGIAVRHMNDGRPYQLIVA-ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGAD 229 (314)
T ss_dssp EEEEEECTTSCEEEE--EEEESSEEEEEEEECTTSCEEEEEEE-ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred CeEEEECCCCCEEEe--ccCCCCcceEEEecccCCCCCEEEEE-ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCC
Confidence 357877766432221 1233456889999 999877665 3345789999975 22 1222321 4567
Q ss_pred eEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeC--CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 128 TVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA--ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 128 ~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
.+.++++|++.+... .++.|.+||.++++.+..+.. ..+..++|+|||++|..++. .++.|..|++.
T Consensus 230 ~i~~d~~G~l~v~~~---~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~-----~~~~l~~~~~~ 298 (314)
T 1pjx_A 230 GMDFDEDNNLLVANW---GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH-----ENNAVWKFEWQ 298 (314)
T ss_dssp EEEEBTTCCEEEEEE---TTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET-----TTTEEEEEECS
T ss_pred ceEECCCCCEEEEEc---CCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC-----CCCeEEEEeCC
Confidence 899999998877765 457899999986765554443 36888999999997777664 25688888764
No 216
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.45 E-value=3e-06 Score=86.07 Aligned_cols=144 Identities=6% Similarity=0.008 Sum_probs=87.2
Q ss_pred ceEEeC-CCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceeeeecCCCCCeEEEEECcCCCEEEEEEccCC---C
Q 020756 32 VQLNWN-RGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMP---A 106 (321)
Q Consensus 32 ~~~~Ws-p~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~---~ 106 (321)
..+.|| |||++|++... ..|... ..||.+++.++ .. +.........++.|+|||+.|+++..... .
T Consensus 177 ~~~~~S~PDG~~lAy~~~----~~G~~~---~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVD----MSGNEV---YTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEECTTTTCEEEEEEE----SSSSSC---EEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred eeeEecCCCCCEEEEEEe----CCCCce---EEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECCCCCCC
Confidence 467999 99999999753 223221 24899998775 31 11001122357899999998888643222 3
Q ss_pred eEEEEeCCCc---eeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC--eE--EEeeeCCCeeeEEEcc
Q 020756 107 SATIFNKKCR---PILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG--KQ--LGTTRAECSVTSEWSP 176 (321)
Q Consensus 107 ~i~i~d~~~~---~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~--~~--i~~~~~~~~~~~~wSp 176 (321)
.|.++++.+. ....+ +......+.|||||++|++.........|+++|+.++ +. ....... ....|++
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~--~~~~~s~ 325 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE--KGVRYDV 325 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC--TTCCEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC--CCceEEE
Confidence 6777888543 12222 2234567899999999998764334568999999875 22 2222221 1223444
Q ss_pred C---CCEEEEEEc
Q 020756 177 D---GRYFMTATT 186 (321)
Q Consensus 177 d---G~~l~t~~s 186 (321)
+ |..|+..+.
T Consensus 326 ~~~~g~~l~~~t~ 338 (751)
T 2xe4_A 326 QMHGTSHLVILTN 338 (751)
T ss_dssp EEETTTEEEEEEC
T ss_pred eeeeCCEEEEEeC
Confidence 4 777776664
No 217
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.42 E-value=0.00029 Score=61.48 Aligned_cols=174 Identities=7% Similarity=-0.032 Sum_probs=108.2
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccC-CCeE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFM-PASA 108 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~-~~~i 108 (321)
....+.+++++..|++.. . +...|+.++.++.....+.........+++++|++..|.++.... .+.|
T Consensus 80 ~p~~ia~d~~~~~lyv~d---~--------~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I 148 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTD---S--------QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKI 148 (267)
T ss_dssp CEEEEEEETTTTEEEEEE---T--------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEE
T ss_pred CccEEEEEecCCeEEEEE---C--------CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEE
Confidence 345667777777666541 1 223467777777533332211224568999999877777653221 3588
Q ss_pred EEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeC-CCeeeEEEccCCCEEEEE
Q 020756 109 TIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA-ECSVTSEWSPDGRYFMTA 184 (321)
Q Consensus 109 ~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~-~~~~~~~wSpdG~~l~t~ 184 (321)
..+++++.....+ .....+.++++|+++.|.++..+ .+.|.++|++.......... .....++ +|+.+|..+
T Consensus 149 ~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~~~~~~~~~~P~gi~--~d~~~lyva 224 (267)
T 1npe_A 149 ETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAG--THRAECLNPAQPGRRKVLEGLQYPFAVT--SYGKNLYYT 224 (267)
T ss_dssp EEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTEEEEEEEEECCCSEEEEE--EETTEEEEE
T ss_pred EEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECC--CCEEEEEecCCCceEEEecCCCCceEEE--EeCCEEEEE
Confidence 8898877654444 23456789999999888887743 47999999975543333332 2344454 456666666
Q ss_pred EcCCceeecCcEEEEeec-CceeEEeccC---ceEEEEEecCC
Q 020756 185 TTAPRLQIDNGIKIFHHN-GSLFFKKMFD---KLFQAEWKPVS 223 (321)
Q Consensus 185 ~s~~rl~~d~~v~iw~~~-g~~l~~~~~~---~~~~~~w~P~~ 223 (321)
.. ..+.|.+++.. |+.+...... ..+.+.+.|+.
T Consensus 225 ~~-----~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 225 DW-----KTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp ET-----TTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred EC-----CCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 64 36788999985 6666444333 35677777764
No 218
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.39 E-value=0.0001 Score=64.44 Aligned_cols=159 Identities=6% Similarity=-0.052 Sum_probs=105.8
Q ss_pred cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEE
Q 020756 31 TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATI 110 (321)
Q Consensus 31 ~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i 110 (321)
...+.|++++..|++.- . +...|+.++.++.....+........+.++++|++..+.++. ...+.|.+
T Consensus 38 ~~gi~~d~~~~~ly~~d---~--------~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d-~~~~~I~~ 105 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTD---I--------SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD-SQLDRIEV 105 (267)
T ss_dssp EEEEEEETTTTEEEEEE---T--------TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEE-TTTTEEEE
T ss_pred EEEEEEecCCCEEEEEE---C--------CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEE-CCCCEEEE
Confidence 45789999888887742 1 233477888777533322212224678999999888887763 34568999
Q ss_pred EeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe--EEEeeeCCCeeeEEEccCCCEEEEEE
Q 020756 111 FNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK--QLGTTRAECSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 111 ~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpdG~~l~t~~ 185 (321)
+++++.....+ +....+.++++|++..|.++..+...+.|+.++++... .+..........++|+|++.+|..+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 106 AKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 99976544443 22456789999988777776633224789999886432 22111122567899999988888777
Q ss_pred cCCceeecCcEEEEeecCcee
Q 020756 186 TAPRLQIDNGIKIFHHNGSLF 206 (321)
Q Consensus 186 s~~rl~~d~~v~iw~~~g~~l 206 (321)
. ..+.|.+++++|..+
T Consensus 186 ~-----~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 186 A-----GTHRAECLNPAQPGR 201 (267)
T ss_dssp T-----TTTEEEEEETTEEEE
T ss_pred C-----CCCEEEEEecCCCce
Confidence 5 367899999876543
No 219
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.32 E-value=3.8e-05 Score=75.20 Aligned_cols=203 Identities=8% Similarity=0.057 Sum_probs=124.9
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEeccc---------------------------CCCc-
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVD---------------------------KTNQ- 56 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d---------------------------~t~~- 56 (321)
+.|.+.+..+ .+.+.+..... .--.+..+|+|+++++.+..... +.|+
T Consensus 175 ~~vtvID~~t---~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 175 NVFTAVDADK---WEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp EEEEEEETTT---TEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred ceEEEEECCC---CeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 3566666666 56667766543 44567789999999886532100 0122
Q ss_pred eeecceeEEEEEcCC--C-c-eeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-------------eeE
Q 020756 57 SYYGESKLNYLTTDG--T-H-EGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-------------PIL 119 (321)
Q Consensus 57 s~~g~~~l~~l~~~g--~-~-~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-------------~~~ 119 (321)
.|.+. +..|+... . . ...+++. ...+.+.++|||+++++. +....++.++|+... .+.
T Consensus 251 ~~i~~--V~VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~-~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 251 QELNG--VKVVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVA-GKLSPTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp EEETT--EEEEECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEE-CTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred eEECc--EEEEeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEe-CCCCCeEEEEECcccccccccccCcccceEE
Confidence 22332 55666543 1 1 2234433 356789999999998886 555669999999643 223
Q ss_pred EeC-CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC----------CeEEEeeeCC-Ceee------EEEccCCCEE
Q 020756 120 ELG-SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD----------GKQLGTTRAE-CSVT------SEWSPDGRYF 181 (321)
Q Consensus 120 ~~~-~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~----------~~~i~~~~~~-~~~~------~~wSpdG~~l 181 (321)
.+. ...-..+.|+|+| ++.++.| ++++|.+||+++ .+.+.++.-+ ..-. +..+|||+||
T Consensus 326 ~v~vG~gP~h~aF~~dG-~aY~t~~--ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 326 EPELGLGPLHTAFDGRG-NAYTSLF--LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp CCBCCSCEEEEEECTTS-EEEEEET--TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred EcCCCCCcceEEECCCC-eEEEEEe--cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEE
Confidence 331 2234567899999 6666554 679999999987 5667776665 2222 3458999999
Q ss_pred EEEEcCCceeecCcE-----------EEEeecCcee---EEe-ccCceEEEEEecCC
Q 020756 182 MTATTAPRLQIDNGI-----------KIFHHNGSLF---FKK-MFDKLFQAEWKPVS 223 (321)
Q Consensus 182 ~t~~s~~rl~~d~~v-----------~iw~~~g~~l---~~~-~~~~~~~~~w~P~~ 223 (321)
+++.-. ..+.+ .|+|++|..+ +.. ...+-.++..-|.+
T Consensus 403 ~~~Nk~----skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~~~ 455 (595)
T 1fwx_A 403 VCLSKF----SKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVHPS 455 (595)
T ss_dssp EEEESC----CTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEECTT
T ss_pred EEcCCC----CccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEccHH
Confidence 988842 11333 8999987654 111 12344555555543
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.28 E-value=5.4e-05 Score=70.34 Aligned_cols=111 Identities=10% Similarity=-0.063 Sum_probs=71.5
Q ss_pred CcCCCEEEEEEccCCCeEEEEeCCCcee---EEe--C----------CcCeeeEEEcCCCCeEEEEccCC-C-----CCc
Q 020756 91 SYSGSEFAVVYGFMPASATIFNKKCRPI---LEL--G----------SGPYNTVRWNPKGKFLCLAGFGN-L-----PGD 149 (321)
Q Consensus 91 sP~g~~l~~~~g~~~~~i~i~d~~~~~~---~~~--~----------~~~~~~~~~sPdG~~l~~~g~~n-~-----~g~ 149 (321)
++++..++++ .. +.+.+.|..+... ..+ . ......+.++|||+.|.++...+ . ...
T Consensus 219 ~~~~~~~~~v--s~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~ 295 (368)
T 1mda_H 219 ANYPGMLVWA--VA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295 (368)
T ss_dssp ETTTTEEEEC--BS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEE
T ss_pred cccCCEEEEE--cC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCC
Confidence 5555555554 33 6788888754321 111 1 01122378999999888764200 0 135
Q ss_pred EEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec-CceeEE
Q 020756 150 MAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN-GSLFFK 208 (321)
Q Consensus 150 i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~-g~~l~~ 208 (321)
+.++|+.+++.+..+.-. ....+.|+|||++++.+... .++.|.++|.. ++.+..
T Consensus 296 ~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~----~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 296 TSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSA----GTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp EEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEET----TTTEEEEEESSSCEEEEE
T ss_pred EEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccC----CCCeEEEEECCCCcEEEE
Confidence 669999999988877654 57889999999976666630 28999999995 444433
No 221
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.25 E-value=0.00089 Score=58.37 Aligned_cols=149 Identities=11% Similarity=0.026 Sum_probs=98.6
Q ss_pred eEEEEEcCCCceeeeecC-CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeE-Ee--CCcCeeeEEEcCCCCeE
Q 020756 63 KLNYLTTDGTHEGLVPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPIL-EL--GSGPYNTVRWNPKGKFL 138 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~-~~--~~~~~~~~~~sPdG~~l 138 (321)
.|+.++..+. ...+.+. ....+++++++++|+.++.. ...+.+..||..+.... .+ .....+.+.+.|+|++.
T Consensus 84 ~v~~~d~~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~--~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~ 160 (300)
T 2qc5_A 84 KIGKLSKKGG-FTEYPLPQPDSGPYGITEGLNGDIWFTQ--LNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALW 160 (300)
T ss_dssp EEEEECTTSC-EEEEECSSTTCCEEEEEECSTTCEEEEE--TTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEE
T ss_pred eEEEECCCCC-eEEecCCCCCCCCccceECCCCCEEEEc--cCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEE
Confidence 4777776644 3333333 33578999999999866552 33568999998744332 22 24567889999999955
Q ss_pred EEEccCCCCCcEEEEECCCCeEEEee-eC--CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEe---ccC
Q 020756 139 CLAGFGNLPGDMAFWDYVDGKQLGTT-RA--ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKK---MFD 212 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~~i~~~-~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~---~~~ 212 (321)
+... ..+.|..||. +++..... .. ..+..+.++++|+.+++... .+.+.+|+.+|...... ...
T Consensus 161 v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~ 230 (300)
T 2qc5_A 161 FTEN---QNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIM------GNKIGRITTTGEISEYDIPTPNA 230 (300)
T ss_dssp EEET---TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT------TTEEEEECTTCCEEEEECSSTTC
T ss_pred EEec---CCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccC------CCEEEEEcCCCcEEEEECCCCCC
Confidence 5554 4578999998 55443321 11 25778999999986665542 56799999877655321 234
Q ss_pred ceEEEEEecCCC
Q 020756 213 KLFQAEWKPVSP 224 (321)
Q Consensus 213 ~~~~~~w~P~~~ 224 (321)
.+..+.+.+++.
T Consensus 231 ~~~~i~~d~~g~ 242 (300)
T 2qc5_A 231 RPHAITAGKNSE 242 (300)
T ss_dssp CEEEEEECSTTC
T ss_pred CceEEEECCCCC
Confidence 677888888764
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.25 E-value=0.00016 Score=70.72 Aligned_cols=161 Identities=7% Similarity=0.049 Sum_probs=106.8
Q ss_pred eEEEEEcCCCc-eeeeecCCCCCeEEEEE-C-cCCCEEEEEEc----------------cCCCeEEEEeCCCc-eeEEeC
Q 020756 63 KLNYLTTDGTH-EGLVPLRKEGPVHDVQW-S-YSGSEFAVVYG----------------FMPASATIFNKKCR-PILELG 122 (321)
Q Consensus 63 ~l~~l~~~g~~-~~~v~l~~~~~v~~~~w-s-P~g~~l~~~~g----------------~~~~~i~i~d~~~~-~~~~~~ 122 (321)
.+..|++.... ...+.+......+.+++ + |+++++++... ..++.+.+.|.... .+.++.
T Consensus 113 rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~ 192 (595)
T 1fwx_A 113 RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL 192 (595)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEE
Confidence 46666665542 23345555567889998 5 99999877531 11247888998654 334441
Q ss_pred -CcCeeeEEEcCCCCeEEEEccCCC-----------------------------------CCcEEEEECCC--CeE-EEe
Q 020756 123 -SGPYNTVRWNPKGKFLCLAGFGNL-----------------------------------PGDMAFWDYVD--GKQ-LGT 163 (321)
Q Consensus 123 -~~~~~~~~~sPdG~~l~~~g~~n~-----------------------------------~g~i~iwD~~~--~~~-i~~ 163 (321)
.+.-.-+..+|||++++++++... -+.|.+.|..+ ++. +..
T Consensus 193 Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~ 272 (595)
T 1fwx_A 193 VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRY 272 (595)
T ss_dssp ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEE
T ss_pred eCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEE
Confidence 124456889999999999875321 13588888887 444 444
Q ss_pred eeC-CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-------------eeEEecc-CceEEEEEecCCCCCCC
Q 020756 164 TRA-ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-------------LFFKKMF-DKLFQAEWKPVSPDKFG 228 (321)
Q Consensus 164 ~~~-~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-------------~l~~~~~-~~~~~~~w~P~~~~~~~ 228 (321)
+.. .....+.+||||+|++.+.. .++.+.++|+... .+..... .....+.|+|++ .+|.
T Consensus 273 Ipvg~~PhGv~~sPDGk~v~V~~~-----~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~ 346 (595)
T 1fwx_A 273 IPIANNPHGCNMAPDKKHLCVAGK-----LSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYT 346 (595)
T ss_dssp EEEESSCCCEEECTTSSEEEEECT-----TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEE
T ss_pred EecCCCceEEEEcCCCCEEEEeCC-----CCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEE
Confidence 433 36778999999999998886 5899999999633 1122222 267788999998 6665
Q ss_pred C
Q 020756 229 D 229 (321)
Q Consensus 229 ~ 229 (321)
.
T Consensus 347 t 347 (595)
T 1fwx_A 347 S 347 (595)
T ss_dssp E
T ss_pred E
Confidence 4
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.23 E-value=4.2e-05 Score=71.11 Aligned_cols=113 Identities=11% Similarity=0.033 Sum_probs=78.3
Q ss_pred EECcCCCEEEEEEc-cCCC--eEEEEeCCC-ceeEEeCCcCeeeEEEcCCCCeEEEEccC-------CCCCcEEEEECCC
Q 020756 89 QWSYSGSEFAVVYG-FMPA--SATIFNKKC-RPILELGSGPYNTVRWNPKGKFLCLAGFG-------NLPGDMAFWDYVD 157 (321)
Q Consensus 89 ~wsP~g~~l~~~~g-~~~~--~i~i~d~~~-~~~~~~~~~~~~~~~~sPdG~~l~~~g~~-------n~~g~i~iwD~~~ 157 (321)
...|+++.+.++.+ ..+. .+.+||... +.+..+..+....+.+||||++|.++... ..++.|.+||..+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 34578887777633 2222 789999854 45556643333399999999999998631 1246799999998
Q ss_pred CeEEEeeeCC---------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee
Q 020756 158 GKQLGTTRAE---------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF 206 (321)
Q Consensus 158 ~~~i~~~~~~---------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l 206 (321)
++.+..+.-. ....+.|||||++|+++... .++.|.++| ....+
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGGSS 159 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCCCE
Confidence 8877765432 34578999999999998731 157799999 65443
No 224
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.22 E-value=0.00085 Score=58.49 Aligned_cols=148 Identities=9% Similarity=-0.036 Sum_probs=93.6
Q ss_pred eEEEEEcCCCceeeeecC-CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEE-e--CCcCeeeEEEcCCCCeE
Q 020756 63 KLNYLTTDGTHEGLVPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILE-L--GSGPYNTVRWNPKGKFL 138 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~-~--~~~~~~~~~~sPdG~~l 138 (321)
.|+.++..+. ...+.+. ....++++.++++|+.++. ....+.|..||..+....- + +......+.+.|+|++.
T Consensus 126 ~i~~~~~~g~-~~~~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~ 202 (300)
T 2qc5_A 126 RIGKLTADGT-IYEYDLPNKGSYPAFITLGSDNALWFT--ENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALW 202 (300)
T ss_dssp EEEEECTTSC-EEEEECSSTTCCEEEEEECTTSSEEEE--ETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEE
T ss_pred eEEEECCCCC-EEEccCCCCCCCceeEEECCCCCEEEE--ecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEE
Confidence 5777776643 2233333 3457889999999984443 2335689999985443321 2 23457789999999876
Q ss_pred EEEccCCCCCcEEEEECCCCeEEEe-eeC--CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE-ec--cC
Q 020756 139 CLAGFGNLPGDMAFWDYVDGKQLGT-TRA--ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK-KM--FD 212 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~~i~~-~~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~-~~--~~ 212 (321)
+... ..+.|.+||. +++.... ... ..+..++++++|+.+++.. .++.|.+|+.+|..... .. ..
T Consensus 203 v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~------~~~~i~~~~~~g~~~~~~~~~~~~ 272 (300)
T 2qc5_A 203 FVEI---MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW------GANQIGRITNDNTIQEYQLQTENA 272 (300)
T ss_dssp EEET---TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET------TTTEEEEECTTSCEEEEECCSTTC
T ss_pred EEcc---CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc------CCCeEEEECCCCcEEEEECCccCC
Confidence 6654 4568999998 5543332 221 2678899999999555554 26889999987755421 11 23
Q ss_pred ceEEEEEecCC
Q 020756 213 KLFQAEWKPVS 223 (321)
Q Consensus 213 ~~~~~~w~P~~ 223 (321)
.+..+...|++
T Consensus 273 ~~~~i~~~~~g 283 (300)
T 2qc5_A 273 EPHGITFGKDG 283 (300)
T ss_dssp CCCCEEECTTS
T ss_pred ccceeEeCCCC
Confidence 44555555554
No 225
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.22 E-value=0.00022 Score=72.35 Aligned_cols=168 Identities=9% Similarity=0.012 Sum_probs=93.2
Q ss_pred eEEEEEcCCcCCC-CceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee--eee-cCC
Q 020756 6 SVQIYACGKDLQS-QPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG--LVP-LRK 81 (321)
Q Consensus 6 ~v~v~~~~~~~~~-~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~--~v~-l~~ 81 (321)
.|.|+++.. + +.+. ..+ ......+.|+|||+.|++... +.++.. ..||++.+.+.... .+. ...
T Consensus 202 ~l~v~dl~~---g~~~l~-~~~-~~~~~~~~WspDg~~l~y~~~---d~~~~~----~~v~~~~lgt~~~~~~lv~~~~~ 269 (751)
T 2xe4_A 202 TIEFKRISD---PSQTIA-DKV-SGTNGEIVWGPDHTSLFYVTK---DETLRE----NKVWRHVMGKLQSEDVCLYEEHN 269 (751)
T ss_dssp EEEEEETTC---TTCCCC-CCE-EEECSCCEECSSTTEEEEEEE---CTTCCE----EEEEEEETTSCGGGCEEEEECCC
T ss_pred EEEEEECCC---CCEeCC-ccc-cCceeeEEEecCCCEEEEEEE---CCCCCC----CEEEEEECCCCchhcEEEEecCC
Confidence 477777766 4 3221 111 112357899999999988742 222221 35888888765322 221 123
Q ss_pred CCCeEEEEECcCCCEEEEEEccC-CCeEEEEeCCCc--ee--EEe---CCcCeeeEEEcCCCCeEEEEccCC--CCCcEE
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFM-PASATIFNKKCR--PI--LEL---GSGPYNTVRWNPKGKFLCLAGFGN--LPGDMA 151 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~-~~~i~i~d~~~~--~~--~~~---~~~~~~~~~~sPdG~~l~~~g~~n--~~g~i~ 151 (321)
.....++.|||||++|++..... ...+.++|+.+. .. ..+ .......+.|+. |+.|++.+..+ ....|+
T Consensus 270 ~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~ 348 (751)
T 2xe4_A 270 PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLL 348 (751)
T ss_dssp TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEE
T ss_pred CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEE
Confidence 34567889999999999875332 337888898653 23 444 123333444433 66666654221 235788
Q ss_pred EEECCCC-eEEE-eeeCC-CeeeEEEccCCCEEEEEEc
Q 020756 152 FWDYVDG-KQLG-TTRAE-CSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 152 iwD~~~~-~~i~-~~~~~-~~~~~~wSpdG~~l~t~~s 186 (321)
.+|+.+. +... .+... ...--.|++++.+|+....
T Consensus 349 ~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~ 386 (751)
T 2xe4_A 349 IAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGR 386 (751)
T ss_dssp EEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEE
T ss_pred EEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEE
Confidence 8888752 2111 12222 3332345666777776663
No 226
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.17 E-value=2.7e-05 Score=72.75 Aligned_cols=119 Identities=13% Similarity=0.059 Sum_probs=85.0
Q ss_pred EEEECcCCCEEEEEEcc---CCCeEEEEeCCCc-eeEEe--CCcCeeeEEEcCCCCeEEEEcc-------CCCCCcEEEE
Q 020756 87 DVQWSYSGSEFAVVYGF---MPASATIFNKKCR-PILEL--GSGPYNTVRWNPKGKFLCLAGF-------GNLPGDMAFW 153 (321)
Q Consensus 87 ~~~wsP~g~~l~~~~g~---~~~~i~i~d~~~~-~~~~~--~~~~~~~~~~sPdG~~l~~~g~-------~n~~g~i~iw 153 (321)
.....|+++.+.+.... +++.+.++|.... .+.++ +..+ . +.+||||++|.++.. |..++.|.+|
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 34557999999887532 2569999999654 45555 5555 4 999999999988752 1124679999
Q ss_pred ECCCCeEEEeeeCC---------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-ceeEEecc
Q 020756 154 DYVDGKQLGTTRAE---------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-SLFFKKMF 211 (321)
Q Consensus 154 D~~~~~~i~~~~~~---------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-~~l~~~~~ 211 (321)
|..+++.+..+.-. ....+.+||||+++..+... .++.|.++|... +.+.....
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----PAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----SSCEEEEEETTTTEEEEEEEC
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----CCCeEEEEECCCCcEEEEEEC
Confidence 99999888876431 45669999999999988621 268899999954 44444433
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.14 E-value=0.00018 Score=68.22 Aligned_cols=166 Identities=15% Similarity=0.172 Sum_probs=103.5
Q ss_pred ceeEEEEEcC------CCceeeeecCCCC-CeEEEEE-----------C--cCCCEEEEEEccCCCeEEEEeCCCc----
Q 020756 61 ESKLNYLTTD------GTHEGLVPLRKEG-PVHDVQW-----------S--YSGSEFAVVYGFMPASATIFNKKCR---- 116 (321)
Q Consensus 61 ~~~l~~l~~~------g~~~~~v~l~~~~-~v~~~~w-----------s--P~g~~l~~~~g~~~~~i~i~d~~~~---- 116 (321)
.+.|..++++ +.-..++.+...+ ..|.+.| + +++++|++. +..+.+|.++|++.+
T Consensus 42 ~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~-~l~s~~I~viD~~t~p~~p 120 (462)
T 2ece_A 42 ADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVP-GLRSSRIYIIDTKPNPREP 120 (462)
T ss_dssp CCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEE-BTTTCCEEEEECCSCTTSC
T ss_pred CCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEc-cCCCCeEEEEECCCCCCCc
Confidence 3446666665 3323334444432 5667778 7 788888775 666789999998644
Q ss_pred -eeEEeC---------CcCeeeEEEcCCCCeEEEEc---cCCCCCcEEEEECCCCeEEEeeeCC-----CeeeEEEccCC
Q 020756 117 -PILELG---------SGPYNTVRWNPKGKFLCLAG---FGNLPGDMAFWDYVDGKQLGTTRAE-----CSVTSEWSPDG 178 (321)
Q Consensus 117 -~~~~~~---------~~~~~~~~~sPdG~~l~~~g---~~n~~g~i~iwD~~~~~~i~~~~~~-----~~~~~~wSpdG 178 (321)
.+..+. ...-..+..+|+| +++++. .++..+.|.++|.++++.+...+.. ...++-|+|++
T Consensus 121 ~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~ 199 (462)
T 2ece_A 121 KIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN 199 (462)
T ss_dssp EEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT
T ss_pred eeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCC
Confidence 333331 1233467889999 544432 1234578999999999999888632 24568899999
Q ss_pred CEEEEEE-cCCce------------eecCcEEEEeecCc-eeEEeccC----ceEEEEE--ecCCCCCCC
Q 020756 179 RYFMTAT-TAPRL------------QIDNGIKIFHHNGS-LFFKKMFD----KLFQAEW--KPVSPDKFG 228 (321)
Q Consensus 179 ~~l~t~~-s~~rl------------~~d~~v~iw~~~g~-~l~~~~~~----~~~~~~w--~P~~~~~~~ 228 (321)
+.++++. ..|+. +.++.|.+||+... ++...... ....+.+ +|+....|-
T Consensus 200 ~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV 269 (462)
T 2ece_A 200 EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFI 269 (462)
T ss_dssp TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEE
T ss_pred CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEE
Confidence 9887774 00000 24789999999644 34443332 2334444 888766553
No 228
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.10 E-value=0.00011 Score=68.68 Aligned_cols=122 Identities=11% Similarity=0.023 Sum_probs=82.3
Q ss_pred EeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc-eeeeecCCCCCeEEEEECcCCCEEEEEEc--------cCC
Q 020756 35 NWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH-EGLVPLRKEGPVHDVQWSYSGSEFAVVYG--------FMP 105 (321)
Q Consensus 35 ~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~-~~~v~l~~~~~v~~~~wsP~g~~l~~~~g--------~~~ 105 (321)
.-.|+|+.+++... ..+.....++.++..... ...+.... .+ + +.+||||++++++.. ..+
T Consensus 39 ~~~pd~~~vyV~~~-------~~~~~~~~V~ViD~~t~~v~~~I~vG~-~P-~-va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 39 APAPDARRVYVNDP-------AHFAAVTQQFVIDGEAGRVIGMIDGGF-LP-N-PVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCTTEEEEEEC-------GGGCSSEEEEEEETTTTEEEEEEEECS-SC-E-EEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred ccCCCCCEEEEEcC-------cccCCCCEEEEEECCCCeEEEEEECCC-CC-c-EEECCCCCEEEEEcccccccccCCCC
Confidence 45799999888521 011123468888875542 33444433 34 5 999999999888631 124
Q ss_pred CeEEEEeCCCc-eeEEe--CC-------cCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC
Q 020756 106 ASATIFNKKCR-PILEL--GS-------GPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE 167 (321)
Q Consensus 106 ~~i~i~d~~~~-~~~~~--~~-------~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~ 167 (321)
..|.+||.... .+.++ +. ..-..+.++|||++|.++.+. .++.|.++|+.+++.+.++.-.
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-PAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-SSCEEEEEETTTTEEEEEEECC
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-CCCeEEEEECCCCcEEEEEECC
Confidence 57999999654 44554 22 134569999999999988631 2478999999999998888654
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.06 E-value=0.00041 Score=63.09 Aligned_cols=149 Identities=9% Similarity=-0.004 Sum_probs=92.3
Q ss_pred cCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee------cCCCCCeEEEEECcCCCEEEEEE
Q 020756 28 RCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP------LRKEGPVHDVQWSYSGSEFAVVY 101 (321)
Q Consensus 28 ~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~------l~~~~~v~~~~wsP~g~~l~~~~ 101 (321)
......+..+++|+.++.... ...+ ...|+.++ ++. ...++ -.+...++.++++|+|+.+++-.
T Consensus 16 ~~~p~~va~~~~g~~~v~~~~---~~~~-----~~~l~~~~-~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 16 SLAPGNITLTPDGRLFLSLHQ---FYQP-----EMQVAELT-QDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN 85 (343)
T ss_dssp SSCEEEEEECTTSCEEEEECG---GGCC-----SCSEEEEE-TTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred CCCcceEEECCCCCEEEEeCC---CCCC-----ceEEEEEC-CCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence 356778999999976544211 0111 12466666 332 11111 12346789999999987544421
Q ss_pred cc---CCCeEEEEeCCCc-eeEEe--CC------cCeeeEEEcCCCCeEEEEccCC-CCCcEEEEECCCCeEEEeeeC--
Q 020756 102 GF---MPASATIFNKKCR-PILEL--GS------GPYNTVRWNPKGKFLCLAGFGN-LPGDMAFWDYVDGKQLGTTRA-- 166 (321)
Q Consensus 102 g~---~~~~i~i~d~~~~-~~~~~--~~------~~~~~~~~sPdG~~l~~~g~~n-~~g~i~iwD~~~~~~i~~~~~-- 166 (321)
+. .+.+|.+||++.. .+..+ +. ...+.+.++|++.++.++..+. .++.|.+||+.+++....+..
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence 21 1468999999744 34444 21 2458999999877776665310 347899999988765554322
Q ss_pred -----------------------------CCeeeEEEccCCCEEEEEEc
Q 020756 167 -----------------------------ECSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 167 -----------------------------~~~~~~~wSpdG~~l~t~~s 186 (321)
..+..++|||||++|.++..
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~ 214 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM 214 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC
Confidence 12456999999999888874
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.06 E-value=0.0003 Score=62.28 Aligned_cols=176 Identities=14% Similarity=0.111 Sum_probs=113.9
Q ss_pred cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEE
Q 020756 31 TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASAT 109 (321)
Q Consensus 31 ~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~ 109 (321)
...+.|+++| .|++.+ + .++...|..++...+ ....+.+........+.+ +|+++.+. ...++.+.
T Consensus 23 ~~Gl~~~~dg-~Lyvst-------g--~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~-t~~~~~v~ 89 (266)
T 2iwa_A 23 TQGLVYAEND-TLFEST-------G--LYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQV-VWLKNIGF 89 (266)
T ss_dssp EEEEEECSTT-EEEEEE-------C--STTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEE-ETTCSEEE
T ss_pred cccEEEeCCC-eEEEEC-------C--CCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEE-EecCCEEE
Confidence 3578899985 555532 1 124556888887543 344455543323334444 46677766 35678999
Q ss_pred EEeCCC-ceeEEeCCc-CeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC-------CeeeEEEccCCCE
Q 020756 110 IFNKKC-RPILELGSG-PYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE-------CSVTSEWSPDGRY 180 (321)
Q Consensus 110 i~d~~~-~~~~~~~~~-~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~-------~~~~~~wSpdG~~ 180 (321)
++|... +.+.++..+ +. ....+|||+.|+++. ..+.|.++|..+.+.+..+.-. ....++|. ||+.
T Consensus 90 viD~~t~~v~~~i~~g~~~-g~glt~Dg~~l~vs~---gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQMKD-GWGLATDGKILYGSD---GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEETTTTEEEEEEECCSSS-CCEEEECSSSEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEECCCCcEEEEEECCCCC-eEEEEECCCEEEEEC---CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 999854 566666322 22 244677899888876 4689999999998777665521 35578888 8854
Q ss_pred EEEEEcCCceeecCcEEEEee-cCceeEEecc---------------CceEEEEEecCCCCCCCCc
Q 020756 181 FMTATTAPRLQIDNGIKIFHH-NGSLFFKKMF---------------DKLFQAEWKPVSPDKFGDI 230 (321)
Q Consensus 181 l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~~~---------------~~~~~~~w~P~~~~~~~~~ 230 (321)
++... .++.|.+-|. +|+.+..... ..+..++|.|+...+|-..
T Consensus 165 yvn~~------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 165 WANIW------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEEET------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEecC------CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 43333 3788999998 5665544332 2568999999998888653
No 231
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.02 E-value=0.0004 Score=62.64 Aligned_cols=197 Identities=13% Similarity=0.099 Sum_probs=115.6
Q ss_pred EEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCcee--ecceeEEEEEcCCCceeeeecCCCCCe
Q 020756 8 QIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSY--YGESKLNYLTTDGTHEGLVPLRKEGPV 85 (321)
Q Consensus 8 ~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~--~g~~~l~~l~~~g~~~~~v~l~~~~~v 85 (321)
+||.++.. +......+- +.+ -.++++|++|+++...+.......+ .....||.++.+|....++. ....
T Consensus 38 ~ly~~~~d--g~~~~~l~~---~~~-~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~---~~~~ 108 (302)
T 3s25_A 38 RLYAMNID--GSNIHKLSN---DTA-MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD---PDPC 108 (302)
T ss_dssp EEEEEETT--SCSCEEEEE---EEE-EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE---CSCE
T ss_pred eEEEEcCC--CCCCEEccC---Cce-eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee---cCCc
Confidence 57777763 344444442 222 4669999999997543211111111 12456999999998554443 2232
Q ss_pred EEEEECcCCCEEEEEE--ccCCCeEEEEeCCCceeEEeCCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEe
Q 020756 86 HDVQWSYSGSEFAVVY--GFMPASATIFNKKCRPILELGSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGT 163 (321)
Q Consensus 86 ~~~~wsP~g~~l~~~~--g~~~~~i~i~d~~~~~~~~~~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~ 163 (321)
..|+++|+.|+.+. ......|...++.+.....+....+ ..|+|+|+.|...+. ....|++.+++.+.....
T Consensus 109 --~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~~--g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 109 --IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNNP--KNGQLYRYDTASQSEALF 182 (302)
T ss_dssp --EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEEEECT--TTCCEEEEETTTTEEEEE
T ss_pred --cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEEEEeC--CCceEEEEECCCCCEEEE
Confidence 37889999999874 1233466667787766666633333 457889999999873 357899999977654443
Q ss_pred eeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEeccCceEEEEEecCCCCCC
Q 020756 164 TRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKKMFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 164 ~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~~~~~~~~~~w~P~~~~~~ 227 (321)
+... .. ..++|+|++|+..... ....|..-+++|..........+ ..|.|....||
T Consensus 183 ~~~~-~~-~~~~P~g~~iy~t~~~----~~~~I~~~~ldG~~~~~Lt~~~~--~~~~~~g~~Iy 238 (302)
T 3s25_A 183 YDCN-CY-KPVVLDDTNVYYMDVN----RDNAIVHVNINNPNPVVLTEANI--EHYNVYGSLIF 238 (302)
T ss_dssp ECSC-EE-EEEEEETTEEEEEEGG----GTTEEEEECSSSCCCEECSCSCE--EEEEEETTEEE
T ss_pred eCCC-cc-ceeeecCCEEEEEEcC----CCcEEEEEECCCCCeEEEeCCCc--ceEEECCCEEE
Confidence 4432 22 3466999999987631 01234444556654322222233 33667666665
No 232
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.97 E-value=0.0023 Score=58.65 Aligned_cols=157 Identities=9% Similarity=-0.013 Sum_probs=103.2
Q ss_pred cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEE
Q 020756 31 TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATI 110 (321)
Q Consensus 31 ~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i 110 (321)
...+.|++.+..|++. |. ....|+.++.++.....+..........+++++.+..|.++. .....|.+
T Consensus 75 ~~~l~~d~~~~~ly~~-----D~------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d-~~~~~I~~ 142 (349)
T 3v64_C 75 AIALDFHHRRELVFWS-----DV------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD-SGTSRIEV 142 (349)
T ss_dssp EEEEEEETTTTEEEEE-----ET------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE-TTTTEEEE
T ss_pred eEEEEEeccccEEEEE-----ec------cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEc-CCCCeEEE
Confidence 4567777776666653 11 223477888777643333222223456889998777777763 33568999
Q ss_pred EeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee--CCCeeeEEEccCCCEEEEEE
Q 020756 111 FNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR--AECSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 111 ~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~--~~~~~~~~wSpdG~~l~t~~ 185 (321)
+++++.....+ ....-+.+++.|.+..|..+..++ .+.|+.+|++......... ......++|+|++..|..+-
T Consensus 143 ~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 143 ANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp EETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred EcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC-CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 99987655444 234568899999888888876332 3789999986432222222 22567899999888888877
Q ss_pred cCCceeecCcEEEEeecCce
Q 020756 186 TAPRLQIDNGIKIFHHNGSL 205 (321)
Q Consensus 186 s~~rl~~d~~v~iw~~~g~~ 205 (321)
+ ..+.|..++++|..
T Consensus 222 ~-----~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 222 A-----KHHVIERANLDGSH 236 (349)
T ss_dssp T-----TTTEEEEEETTSCS
T ss_pred C-----CCCEEEEEeCCCCc
Confidence 5 36678888888753
No 233
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.95 E-value=0.0015 Score=60.72 Aligned_cols=158 Identities=9% Similarity=-0.011 Sum_probs=104.1
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASAT 109 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~ 109 (321)
....+.|.+.+..|++. |. ....|+.++.++.....+..........+++++.+..|.++. .....|.
T Consensus 117 ~~~gl~~d~~~~~ly~~-----D~------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d-~~~~~I~ 184 (386)
T 3v65_B 117 NAIALDFHHRRELVFWS-----DV------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD-SGTSRIE 184 (386)
T ss_dssp CEEEEEEETTTTEEEEE-----ET------TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEE-TTTTEEE
T ss_pred ccEEEEEecCCCeEEEE-----eC------CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEc-CCCCeEE
Confidence 35567888877777664 11 223478888877643333222223456788988777777763 3356899
Q ss_pred EEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee--CCCeeeEEEccCCCEEEEE
Q 020756 110 IFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR--AECSVTSEWSPDGRYFMTA 184 (321)
Q Consensus 110 i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~--~~~~~~~~wSpdG~~l~t~ 184 (321)
++++++.....+ +...-+.+++.|.+..|..+..++ .+.|+.+|++......... ......++|+|++..|..+
T Consensus 185 ~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 185 VANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp ECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEE
T ss_pred EEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC-CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEE
Confidence 999877655444 234568899999988888876332 3789999986442222222 2256789999988888887
Q ss_pred EcCCceeecCcEEEEeecCce
Q 020756 185 TTAPRLQIDNGIKIFHHNGSL 205 (321)
Q Consensus 185 ~s~~rl~~d~~v~iw~~~g~~ 205 (321)
-+ ..+.|..++++|..
T Consensus 264 D~-----~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 264 DA-----KHHVIERANLDGSH 279 (386)
T ss_dssp ET-----TTTEEEEECTTSCS
T ss_pred EC-----CCCEEEEEeCCCCe
Confidence 75 36678888887753
No 234
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.94 E-value=0.0052 Score=55.26 Aligned_cols=178 Identities=10% Similarity=0.019 Sum_probs=110.2
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCC----CceeeeecC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDG----THEGLVPLR 80 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g----~~~~~v~l~ 80 (321)
..|+..++.. ........-+ .....+.|++.+..|++.- . ....|+.++.++ .....+.-.
T Consensus 10 ~~I~~i~~~~---~~~~~~~~~~-~~p~g~~~d~~~~~ly~~D-----~------~~~~I~~~~~~g~~~~~~~~~~~~~ 74 (316)
T 1ijq_A 10 HEVRKMTLDR---SEYTSLIPNL-RNVVALDTEVASNRIYWSD-----L------SQRMICSTQLDRAHGVSSYDTVISR 74 (316)
T ss_dssp SSEEEEETTS---CCCEEEECSC-SSEEEEEEETTTTEEEEEE-----T------TTTEEEEEEC--------CEEEECS
T ss_pred CeEEEEECCC---cceEehhcCC-CceEEEEEEeCCCEEEEEE-----C------CCCcEEEEECCCCCCCcccEEEEeC
Confidence 3566667665 3333222222 2456789999888877741 1 123477777765 211222111
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD 157 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~ 157 (321)
.......+++++.+..|.++. ...+.|.++|+.+.....+ .....+.++..|.+..|..+..++ .+.|+.++++.
T Consensus 75 ~~~~p~glavd~~~~~ly~~d-~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-~~~I~~~~~dG 152 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTD-SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNG 152 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEE-TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTS
T ss_pred CCCCcCEEEEeecCCeEEEEE-CCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC-CCeEEEEcCCC
Confidence 223457899998777777763 3456899999987655444 334567899999888887776321 36899999853
Q ss_pred CeEEEee--eCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc
Q 020756 158 GKQLGTT--RAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 158 ~~~i~~~--~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~ 204 (321)
....... .......++|+|++..|..+.+ ..+.|..++++|.
T Consensus 153 ~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~-----~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 153 VDIYSLVTENIQWPNGITLDLLSGRLYWVDS-----KLHSISSIDVNGG 196 (316)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSC
T ss_pred CCeEEEEECCCCCceEEEEeccCCEEEEEEC-----CCCeEEEEecCCC
Confidence 3222111 1236778999999888888775 3667888888774
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.90 E-value=0.0017 Score=58.93 Aligned_cols=99 Identities=6% Similarity=-0.031 Sum_probs=66.2
Q ss_pred CeEEEEECcCCCEEEEEEccCCCeEEEEeCC---C---------ceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcE
Q 020756 84 PVHDVQWSYSGSEFAVVYGFMPASATIFNKK---C---------RPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDM 150 (321)
Q Consensus 84 ~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~---~---------~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i 150 (321)
.+..++|+|||+.|.+... ....+..++.. . ..+..+ +......++++++|+++++.. ..+.|
T Consensus 196 ~~~gia~s~dg~~ly~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~---~~~~V 271 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPM-HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDL---AHSAI 271 (343)
T ss_dssp CEEEEEECTTSCEEEEEES-SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEG---GGTEE
T ss_pred ccceeEeccCCCEEEEEeC-CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEcc---CCCeE
Confidence 3688999999998888632 22366666531 1 011222 233556799999998777765 56899
Q ss_pred EEEECCCCeEEEeeeC---CCeeeEEEccCCCEEEEEEc
Q 020756 151 AFWDYVDGKQLGTTRA---ECSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 151 ~iwD~~~~~~i~~~~~---~~~~~~~wSpdG~~l~t~~s 186 (321)
.+||..+++....... .....++++++|+++++...
T Consensus 272 ~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 272 GVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp EEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred EEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 9999966654333322 25788999999998777763
No 236
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.90 E-value=0.0016 Score=58.41 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=75.1
Q ss_pred CeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe----C---CcCeeeEEEcC-CCCeEEEEccC-----------
Q 020756 84 PVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL----G---SGPYNTVRWNP-KGKFLCLAGFG----------- 144 (321)
Q Consensus 84 ~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~----~---~~~~~~~~~sP-dG~~l~~~g~~----------- 144 (321)
..+.+++++++..|.++ +....+..+|..+..+..+ . ....+.+.+.| +|++.++....
T Consensus 81 ~p~gi~~~~~~g~l~v~--d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIV--DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CEEEEEEETTTTEEEEE--ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCceEEEcCCCCcEEEE--ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 57889999833345554 2334688888875544333 1 13467899999 99876664311
Q ss_pred ---CCCCcEEEEECCCCeEEEeeeC-CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 145 ---NLPGDMAFWDYVDGKQLGTTRA-ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 145 ---n~~g~i~iwD~~~~~~i~~~~~-~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
...+.|+.||..+++....... .....++|+|||++|..+.+ ..+.|.+|++.+
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~-----~~~~I~~~~~~~ 216 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEF-----LSHQIVKYWLEG 216 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEG-----GGTEEEEEESSS
T ss_pred cccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeC-----CCCeEEEEECCC
Confidence 1247899999987754332222 35567999999998877764 367899998875
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.88 E-value=0.0012 Score=58.14 Aligned_cols=157 Identities=15% Similarity=0.115 Sum_probs=100.5
Q ss_pred cceeEEEEEcCCC-ceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEeCCcCeeeEEEcCCCCe
Q 020756 60 GESKLNYLTTDGT-HEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILELGSGPYNTVRWNPKGKF 137 (321)
Q Consensus 60 g~~~l~~l~~~g~-~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~~~~sPdG~~ 137 (321)
|...|..++...+ ....+.++. ........++|+.|.++ .-.++.+.+||.+ .+.+.++.-.. .....++||+.
T Consensus 63 g~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~l-tw~~~~v~v~D~~t~~~~~ti~~~~-eG~glt~dg~~ 138 (262)
T 3nol_A 63 GRSSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGL-TWKNGLGFVWNIRNLRQVRSFNYDG-EGWGLTHNDQY 138 (262)
T ss_dssp TEEEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEE-ESSSSEEEEEETTTCCEEEEEECSS-CCCCEEECSSC
T ss_pred CCceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEE-EeeCCEEEEEECccCcEEEEEECCC-CceEEecCCCE
Confidence 5567888887544 344455543 33333344567777776 3457799999985 45666663221 22344468888
Q ss_pred EEEEccCCCCCcEEEEECCCCeEEEeeeC-------CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe
Q 020756 138 LCLAGFGNLPGDMAFWDYVDGKQLGTTRA-------ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK 209 (321)
Q Consensus 138 l~~~g~~n~~g~i~iwD~~~~~~i~~~~~-------~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~ 209 (321)
|+.+. ..+.|.++|..+++.+..+.- ..+..++|. +|+.++..- .++.|.+.|. +|+.+...
T Consensus 139 L~~Sd---Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w------~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 139 LIMSD---GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW------QTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp EEECC---SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TSSEEEEECTTTCBEEEEE
T ss_pred EEEEC---CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc------cCCeEEEEECCCCcEEEEE
Confidence 88876 457899999999887766543 134457887 786443332 3778888887 56554333
Q ss_pred cc--------------CceEEEEEecCCCCCCCCc
Q 020756 210 MF--------------DKLFQAEWKPVSPDKFGDI 230 (321)
Q Consensus 210 ~~--------------~~~~~~~w~P~~~~~~~~~ 230 (321)
.. +.+..++|.|+...+|-..
T Consensus 209 d~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 209 DLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp ECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 22 2567899999988888664
No 238
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=0.0015 Score=61.82 Aligned_cols=152 Identities=13% Similarity=0.129 Sum_probs=93.3
Q ss_pred ceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEcc---CCCe
Q 020756 32 VQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGF---MPAS 107 (321)
Q Consensus 32 ~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~---~~~~ 107 (321)
..|.|+| ++..|++.- . + ..|+.++..+.....+. ........++|+++|+.|.++... ....
T Consensus 140 ~~lavdp~~~g~Lyv~d-----~------~-~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVG-----E------Q-HPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPN 206 (430)
T ss_dssp CEEEEETTEEEEEEEEE-----B------T-EEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEE
T ss_pred CEEEECCCCCCeEEEEe-----C------C-CcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccce
Confidence 4667777 355554431 1 1 35777887775333332 234567899999999977776321 1113
Q ss_pred EEEEeCCCcee--EEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeC---CCeeeEEEccCCCEE
Q 020756 108 ATIFNKKCRPI--LEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA---ECSVTSEWSPDGRYF 181 (321)
Q Consensus 108 i~i~d~~~~~~--~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~---~~~~~~~wSpdG~~l 181 (321)
+.+++..+... ..+ .....+.++++|++..|.++.. ..+.|+.+|...+........ .....++|+|+|++|
T Consensus 207 v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~--~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 207 NYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSW--NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp EEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEET--TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred EEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEEC--CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence 55555544322 233 2345577899994444555543 347899999987754222222 246779999999977
Q ss_pred EEEEcCCceeecCcEEEEeecC
Q 020756 182 MTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 182 ~t~~s~~rl~~d~~v~iw~~~g 203 (321)
..+.. ..+.|..+++++
T Consensus 285 yv~d~-----~~~~I~~~~~d~ 301 (430)
T 3tc9_A 285 YIVVV-----NQHYILRSDYDW 301 (430)
T ss_dssp EEEET-----TTTEEEEEEEET
T ss_pred EEEEC-----CCCEEEEEeCCc
Confidence 77765 377889988875
No 239
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.79 E-value=0.00024 Score=67.30 Aligned_cols=114 Identities=9% Similarity=0.020 Sum_probs=80.9
Q ss_pred CcCCCEEEEEEccC-C--CeEEEEeCCCc-eeEEe--CCcCeeeEEEcCCCCeEEEEccC-------CCCCcEEEEECCC
Q 020756 91 SYSGSEFAVVYGFM-P--ASATIFNKKCR-PILEL--GSGPYNTVRWNPKGKFLCLAGFG-------NLPGDMAFWDYVD 157 (321)
Q Consensus 91 sP~g~~l~~~~g~~-~--~~i~i~d~~~~-~~~~~--~~~~~~~~~~sPdG~~l~~~g~~-------n~~g~i~iwD~~~ 157 (321)
.|+++.+++..... . +.+.++|.... .+.++ +..+ .+.+||||++|+++... ..++.|.++|..+
T Consensus 81 ~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 81 APDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 36888877764321 1 68999999654 45555 5556 79999999999887531 1246899999999
Q ss_pred CeEEEeeeC---------CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC-ceeEEec
Q 020756 158 GKQLGTTRA---------ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG-SLFFKKM 210 (321)
Q Consensus 158 ~~~i~~~~~---------~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g-~~l~~~~ 210 (321)
++.+..+.- .....+.+||||++++.+... .++.|.+.|... +.+....
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeEEEEEE
Confidence 988877642 245678999999999988731 157899999854 4443333
No 240
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.71 E-value=0.018 Score=53.57 Aligned_cols=158 Identities=11% Similarity=0.040 Sum_probs=102.0
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc----eeeeecCCCCCeEEEEECcCCCEEEEEEccCC
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH----EGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMP 105 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~----~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~ 105 (321)
....|.|++.+..|++. |. ....|+.++.++.. ...+..........+++.+.+..|.++. ...
T Consensus 113 ~~~~l~~d~~~~~lyws-----D~------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d-~~~ 180 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWS-----DL------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVL 180 (400)
T ss_dssp CEEEEEEETTTTEEEEE-----ET------TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEE-TTT
T ss_pred cceEEeeeeccCceEEE-----ec------CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEE-CCC
Confidence 45677888877777663 11 12236677766521 1222212334567899998777777763 345
Q ss_pred CeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeC--CCeeeEEEccCCCE
Q 020756 106 ASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA--ECSVTSEWSPDGRY 180 (321)
Q Consensus 106 ~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~--~~~~~~~wSpdG~~ 180 (321)
+.|.++++++.....+ .....+.|+..|.+.+|..+..+ ..+.|+..+++.......... .....+++++++..
T Consensus 181 ~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~ 259 (400)
T 3p5b_L 181 GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGR 259 (400)
T ss_dssp TEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred CeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCE
Confidence 6899999987755554 33446789999988888887633 236899999864432222222 36778999999888
Q ss_pred EEEEEcCCceeecCcEEEEeecCce
Q 020756 181 FMTATTAPRLQIDNGIKIFHHNGSL 205 (321)
Q Consensus 181 l~t~~s~~rl~~d~~v~iw~~~g~~ 205 (321)
|..+-+ ..+.|..++++|..
T Consensus 260 lY~aD~-----~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 260 LYWVDS-----KLHSISSIDVNGGN 279 (400)
T ss_dssp EEEEET-----TTTEEEEEETTSCC
T ss_pred EEEEEC-----CCCEEEEEeCCCCc
Confidence 888875 36778888887753
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.69 E-value=0.0051 Score=54.29 Aligned_cols=157 Identities=11% Similarity=-0.054 Sum_probs=96.8
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceeeeecC-C
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGLVPLR-K 81 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~v~l~-~ 81 (321)
.++|+++++.+ ++.+.+..+-. .........+|+.|.++.- .+..++.++.... ....++.. .
T Consensus 43 ~s~v~~iD~~t---g~v~~~i~l~~-~~fgeGi~~~g~~lyv~t~-----------~~~~v~viD~~t~~v~~~i~~g~~ 107 (266)
T 2iwa_A 43 RSSVRQVALQT---GKVENIHKMDD-SYFGEGLTLLNEKLYQVVW-----------LKNIGFIYDRRTLSNIKNFTHQMK 107 (266)
T ss_dssp TCEEEEEETTT---CCEEEEEECCT-TCCEEEEEEETTEEEEEET-----------TCSEEEEEETTTTEEEEEEECCSS
T ss_pred CCEEEEEECCC---CCEEEEEecCC-CcceEEEEEeCCEEEEEEe-----------cCCEEEEEECCCCcEEEEEECCCC
Confidence 46888888888 67666655322 1111122223566665521 2234667776543 22334433 2
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe--CC-----cCeeeEEEcCCCCeEEEEccCCCCCcEEEE
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL--GS-----GPYNTVRWNPKGKFLCLAGFGNLPGDMAFW 153 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~--~~-----~~~~~~~~sPdG~~l~~~g~~n~~g~i~iw 153 (321)
+ ....++||+.+++.. ..+.+.++|..+. .+..+ +. ...|.+.|. +|+..+... ..+.|.+.
T Consensus 108 ~----g~glt~Dg~~l~vs~--gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~---~~~~V~vI 177 (266)
T 2iwa_A 108 D----GWGLATDGKILYGSD--GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW---QTDCIARI 177 (266)
T ss_dssp S----CCEEEECSSSEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET---TSSEEEEE
T ss_pred C----eEEEEECCCEEEEEC--CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC---CCCeEEEE
Confidence 2 234667898888763 4679999998653 44444 21 136788898 775444443 45799999
Q ss_pred ECCCCeEEEeeeCC---------------CeeeEEEccCCCEEEEEE
Q 020756 154 DYVDGKQLGTTRAE---------------CSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 154 D~~~~~~i~~~~~~---------------~~~~~~wSpdG~~l~t~~ 185 (321)
|..+++.+..+.-. ....++|+|+|+.|..+.
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 99999888877642 336799999987776666
No 242
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.64 E-value=0.016 Score=50.76 Aligned_cols=177 Identities=8% Similarity=0.092 Sum_probs=111.4
Q ss_pred CccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeE
Q 020756 29 CSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASA 108 (321)
Q Consensus 29 ~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i 108 (321)
.+...+.|+|++..|.++.. ....|+.++..+.....+++........+++.++|.++++ ...+..+
T Consensus 27 ~~lSGla~~~~~~~L~aV~d-----------~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs--~E~~~~l 93 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTIN-----------KPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVIS--DERDYAI 93 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEE-----------TTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEE--ETTTTEE
T ss_pred cCcceeEEeCCCCEEEEEEC-----------CCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEE--ECCCCcE
Confidence 45678999999887777632 1334889999887777777765567889999988864443 2345788
Q ss_pred EEEeCCCce----eE--Ee------CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC-CCeEEEee---------eC
Q 020756 109 TIFNKKCRP----IL--EL------GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV-DGKQLGTT---------RA 166 (321)
Q Consensus 109 ~i~d~~~~~----~~--~~------~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~-~~~~i~~~---------~~ 166 (321)
.+|++.... +. .+ .+.....++|+|+++.|.++.-.. ...|+.|+-. ....+..+ ..
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~ 172 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTL 172 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCS
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhcccccc
Confidence 898763221 11 11 123356899999997777765211 1256666511 11111111 11
Q ss_pred CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEEecc-----------CceEEEEEecCCC
Q 020756 167 ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFKKMF-----------DKLFQAEWKPVSP 224 (321)
Q Consensus 167 ~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~~~~-----------~~~~~~~w~P~~~ 224 (321)
.....+++.|...+|+.-+. ..+.+.++|.+|+.+..... ..--.+++.|++.
T Consensus 173 ~d~S~l~~dp~tg~lliLS~-----~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSH-----ESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp SCCCEEEEETTTTEEEEEET-----TTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred CCceeEEEcCCCCeEEEEEC-----CCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 25677999997555555554 47788999999986633221 2446788888775
No 243
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.62 E-value=0.0022 Score=57.75 Aligned_cols=150 Identities=6% Similarity=-0.005 Sum_probs=96.2
Q ss_pred EEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeC
Q 020756 34 LNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNK 113 (321)
Q Consensus 34 ~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~ 113 (321)
..|+++|++|++... .++ +...||.++++|....++.-. .+ ..|+|+|+.|..... ....|...++
T Consensus 109 ~~~s~~g~~Iy~~~~---~~~-----~~~~Iy~~~~dGs~~~~lt~~---~~--~~~~~~g~~iy~t~~-g~~~Iy~~~l 174 (302)
T 3s25_A 109 IYASLIGNYIYYLHY---DTQ-----TATSLYRIRIDGEEKKKIKNH---YL--FTCNTSDRYFYYNNP-KNGQLYRYDT 174 (302)
T ss_dssp EEEEEETTEEEEEEE---SSS-----SCEEEEEEETTSCCCEEEESS---CC--CCSEEETTEEEEECT-TTCCEEEEET
T ss_pred cEEEEeCCEEEEEee---cCC-----CCceEEEEECCCCCeEEEeCC---Cc--eEeeEECCEEEEEeC-CCceEEEEEC
Confidence 478999999988521 111 445699999998765555422 22 457889999888633 3457888888
Q ss_pred CCceeEEeCCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeec
Q 020756 114 KCRPILELGSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQID 193 (321)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d 193 (321)
.+.....+..+..... ++|+|++|+.....+ ...|+.-+++...... +....+ ..|+|+|++|..+... ..
T Consensus 175 ~g~~~~~l~~~~~~~~-~~P~g~~iy~t~~~~-~~~I~~~~ldG~~~~~-Lt~~~~--~~~~~~g~~Iy~~~~~----~~ 245 (302)
T 3s25_A 175 ASQSEALFYDCNCYKP-VVLDDTNVYYMDVNR-DNAIVHVNINNPNPVV-LTEANI--EHYNVYGSLIFYQRGG----DN 245 (302)
T ss_dssp TTTEEEEEECSCEEEE-EEEETTEEEEEEGGG-TTEEEEECSSSCCCEE-CSCSCE--EEEEEETTEEEEEECS----SS
T ss_pred CCCCEEEEeCCCccce-eeecCCEEEEEEcCC-CcEEEEEECCCCCeEE-EeCCCc--ceEEECCCEEEEEECC----CC
Confidence 7765555533444443 569999999976321 2578888887554222 222233 4599999999887632 13
Q ss_pred CcEEEEeecCcee
Q 020756 194 NGIKIFHHNGSLF 206 (321)
Q Consensus 194 ~~v~iw~~~g~~l 206 (321)
..|..-+++|...
T Consensus 246 ~~i~~~~~DG~~r 258 (302)
T 3s25_A 246 PALCVVKNDGTGF 258 (302)
T ss_dssp CEEEEEETTSCCC
T ss_pred cEEEEEECCCCcc
Confidence 4566666677543
No 244
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.61 E-value=0.013 Score=52.91 Aligned_cols=157 Identities=9% Similarity=-0.018 Sum_probs=103.2
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee-eeecCCCCCeEEEEECcCCCEEEEEEccCCCeE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG-LVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASA 108 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~-~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i 108 (321)
..+.+.|.+.+..|++. |. ....|+.++.++.... .+....-.....+++.+.+..|.++. ...+.|
T Consensus 36 ~~~~ld~d~~~~~lyw~-----D~------~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d-~~~~~I 103 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWS-----DV------SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTD-SETNRI 103 (318)
T ss_dssp EEEEEEEEGGGTEEEEE-----ET------TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEE-TTTTEE
T ss_pred ccEEEEEEeCCCEEEEE-----EC------CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEE-CCCCEE
Confidence 45678899988887764 11 1234777777776321 11111223456789988777777763 345689
Q ss_pred EEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee--CCCeeeEEEccCCCEEEE
Q 020756 109 TIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR--AECSVTSEWSPDGRYFMT 183 (321)
Q Consensus 109 ~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~--~~~~~~~~wSpdG~~l~t 183 (321)
.++++++.....+ ....-+.+++.|.+.+|..+..+ ..+.|+..+++......... -.....++|+|++..|..
T Consensus 104 ~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~ 182 (318)
T 3sov_A 104 EVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYW 182 (318)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEE
Confidence 9999987655444 23456789999988888777632 24789999986332211111 235678999999888888
Q ss_pred EEcCCceeecCcEEEEeecCc
Q 020756 184 ATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 184 ~~s~~rl~~d~~v~iw~~~g~ 204 (321)
+-+ ..+.|..++++|.
T Consensus 183 aD~-----~~~~I~~~d~dG~ 198 (318)
T 3sov_A 183 ADA-----KLNFIHKSNLDGT 198 (318)
T ss_dssp EET-----TTTEEEEEETTSC
T ss_pred EEC-----CCCEEEEEcCCCC
Confidence 875 3677888888774
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.56 E-value=0.0045 Score=53.83 Aligned_cols=157 Identities=10% Similarity=0.067 Sum_probs=99.4
Q ss_pred cceeEEEEEcCCC-ceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEeCCcCeeeEEEcCCCCe
Q 020756 60 GESKLNYLTTDGT-HEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILELGSGPYNTVRWNPKGKF 137 (321)
Q Consensus 60 g~~~l~~l~~~g~-~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~~~~sPdG~~ 137 (321)
|...|..++...+ ....+.+.. ........++++.|.++ .-..+.+.+||.+ .+.+.++.... ......+||+.
T Consensus 41 g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~l-tw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~dg~~ 116 (243)
T 3mbr_X 41 GRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQL-TWRNHEGFVYDLATLTPRARFRYPG-EGWALTSDDSH 116 (243)
T ss_dssp TSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEE-ESSSSEEEEEETTTTEEEEEEECSS-CCCEEEECSSC
T ss_pred CCceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEE-EeeCCEEEEEECCcCcEEEEEeCCC-CceEEeeCCCE
Confidence 5566888887544 334455443 33333344456777776 3457799999985 45666663211 12333467888
Q ss_pred EEEEccCCCCCcEEEEECCCCeEEEeeeC-------CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe
Q 020756 138 LCLAGFGNLPGDMAFWDYVDGKQLGTTRA-------ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK 209 (321)
Q Consensus 138 l~~~g~~n~~g~i~iwD~~~~~~i~~~~~-------~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~ 209 (321)
|..+. ..+.|.++|..+.+.+..++- ..+..++|. +|+.++..- .++.|.+.|. +|+.+...
T Consensus 117 L~vSd---gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw------~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 117 LYMSD---GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW------LTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp EEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TTTEEEEECTTTCBEEEEE
T ss_pred EEEEC---CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC------CCCeEEEEECCCCCEEEEE
Confidence 87776 467999999999877766543 245567777 777443332 3677888887 55544222
Q ss_pred c---------------cCceEEEEEecCCCCCCCCc
Q 020756 210 M---------------FDKLFQAEWKPVSPDKFGDI 230 (321)
Q Consensus 210 ~---------------~~~~~~~~w~P~~~~~~~~~ 230 (321)
. .+.+..++|.|+...+|-..
T Consensus 187 dl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 187 DLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 1 13567899999988888664
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.55 E-value=0.016 Score=51.49 Aligned_cols=149 Identities=13% Similarity=0.102 Sum_probs=87.2
Q ss_pred cceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEE
Q 020756 31 TVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATI 110 (321)
Q Consensus 31 ~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i 110 (321)
...+.|+++|+ |++. . . ....|+.++..+.....+.. .+..+.++++++|+.++...+.....+..
T Consensus 34 pegia~~~~g~-lyv~-d--~--------~~~~I~~~d~~g~~~~~~~~--~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 34 LENLASAPDGT-IFVT-N--H--------EVGEIVSITPDGNQQIHATV--EGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECTTSC-EEEE-E--T--------TTTEEEEECTTCCEEEEEEC--SSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred cceEEECCCCC-EEEE-e--C--------CCCeEEEECCCCceEEEEeC--CCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 45789999987 4443 1 1 12247788777754443332 35688999999999544432222235777
Q ss_pred EeCCCceeEEe---CC-cCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe-EEEee---------eC--CCeeeEEE
Q 020756 111 FNKKCRPILEL---GS-GPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK-QLGTT---------RA--ECSVTSEW 174 (321)
Q Consensus 111 ~d~~~~~~~~~---~~-~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~-~i~~~---------~~--~~~~~~~w 174 (321)
+|.....+..+ .. ...+.+...+++..++... ..+.|+++|..+++ .+... .. .....+
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~---~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS---YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET---TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC---CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 77644333332 22 2234455555554444433 46899999987653 22110 01 123345
Q ss_pred ccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 175 SPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 175 SpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
+|||++|..+.+ ..+.|..+++++
T Consensus 175 s~dg~~lyv~d~-----~~~~I~~~~~~~ 198 (306)
T 2p4o_A 175 KRFGNFLYVSNT-----EKMLLLRIPVDS 198 (306)
T ss_dssp EEETTEEEEEET-----TTTEEEEEEBCT
T ss_pred CcCCCEEEEEeC-----CCCEEEEEEeCC
Confidence 899998888776 377899999864
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.54 E-value=0.011 Score=51.96 Aligned_cols=162 Identities=16% Similarity=0.103 Sum_probs=98.1
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceeeeecC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGLVPLR 80 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~v~l~ 80 (321)
|.-+.|+++++.+ ++.+.+. + ......-.-.++|+.|.+++- .+..++.++.... ....++..
T Consensus 72 G~~g~v~~iD~~T---gkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw-----------~~~~v~V~D~~Tl~~~~ti~~~ 135 (268)
T 3nok_A 72 GHQGTLRQLSLES---AQPVWME-R-LGNIFAEGLASDGERLYQLTW-----------TEGLLFTWSGMPPQRERTTRYS 135 (268)
T ss_dssp TTTTEEEECCSSC---SSCSEEE-E-CTTCCEEEEEECSSCEEEEES-----------SSCEEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEEEECCC---CcEEeEE-C-CCCcceeEEEEeCCEEEEEEc-----------cCCEEEEEECCcCcEEEEEeCC
Confidence 5567788888888 6777666 3 222222112345667766521 1234667776443 23344443
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe----C---CcCeeeEEEcCCCCeEEEEccCCCCCcEEE
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL----G---SGPYNTVRWNPKGKFLCLAGFGNLPGDMAF 152 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~----~---~~~~~~~~~sPdG~~l~~~g~~n~~g~i~i 152 (321)
.++ ...++||+.|++.. ...+|.++|..+ +.+.++ + -...|.+.|. +|+..+..- ....|.+
T Consensus 136 ~eG----wGLt~Dg~~L~vSd--Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw---~s~~I~v 205 (268)
T 3nok_A 136 GEG----WGLCYWNGKLVRSD--GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIW---HSSDVLE 205 (268)
T ss_dssp SCC----CCEEEETTEEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET---TCSEEEE
T ss_pred Cce----eEEecCCCEEEEEC--CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEEC---CCCeEEE
Confidence 332 23336788888863 367999999865 344444 1 1245788888 786444443 4569999
Q ss_pred EECCCCeEEEeeeCC---------------CeeeEEEccC-CCEEEEEEcCCc
Q 020756 153 WDYVDGKQLGTTRAE---------------CSVTSEWSPD-GRYFMTATTAPR 189 (321)
Q Consensus 153 wD~~~~~~i~~~~~~---------------~~~~~~wSpd-G~~l~t~~s~~r 189 (321)
.|.++++.+..+... ....|+|+|+ +++++|+-.+|+
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~ 258 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPR 258 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCc
Confidence 999999887776532 2355999997 555566665554
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.52 E-value=0.027 Score=50.48 Aligned_cols=156 Identities=8% Similarity=-0.064 Sum_probs=97.5
Q ss_pred EEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC----ceeEE-e--CCcCeeeEEEcCCCC
Q 020756 64 LNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC----RPILE-L--GSGPYNTVRWNPKGK 136 (321)
Q Consensus 64 l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~----~~~~~-~--~~~~~~~~~~sPdG~ 136 (321)
|..++..+.....+ +........+.|++.+..|.++. ...+.|..+++.+ ..... + +......+++.+.++
T Consensus 12 I~~i~~~~~~~~~~-~~~~~~p~g~~~d~~~~~ly~~D-~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 12 VRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp EEEEETTSCCCEEE-ECSCSSEEEEEEETTTTEEEEEE-TTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred EEEEECCCcceEeh-hcCCCceEEEEEEeCCCEEEEEE-CCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 66777766432222 23445678999999888887763 3456899999876 22222 2 223457889998777
Q ss_pred eEEEEccCCCCCcEEEEECCCCeEEEeee--CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE---ecc
Q 020756 137 FLCLAGFGNLPGDMAFWDYVDGKQLGTTR--AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK---KMF 211 (321)
Q Consensus 137 ~l~~~g~~n~~g~i~iwD~~~~~~i~~~~--~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~---~~~ 211 (321)
.|..+.. ..+.|.++|++......... ......++.+|++.+|..+... ..+.|...+.+|..... ...
T Consensus 90 ~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~~~~~~~~~~ 163 (316)
T 1ijq_A 90 NIYWTDS--VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTENI 163 (316)
T ss_dssp EEEEEET--TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEECSSC
T ss_pred eEEEEEC--CCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCCeEEEEECCC
Confidence 7776653 45799999987543332232 2367789999987766666531 02567777777765422 234
Q ss_pred CceEEEEEecCCCCCC
Q 020756 212 DKLFQAEWKPVSPDKF 227 (321)
Q Consensus 212 ~~~~~~~w~P~~~~~~ 227 (321)
.....++|.|+...+|
T Consensus 164 ~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLY 179 (316)
T ss_dssp SCEEEEEEETTTTEEE
T ss_pred CCceEEEEeccCCEEE
Confidence 4566788888776665
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.50 E-value=0.026 Score=52.27 Aligned_cols=135 Identities=5% Similarity=-0.119 Sum_probs=84.9
Q ss_pred eEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEE
Q 020756 63 KLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLC 139 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~ 139 (321)
.|+.++.+|.....+.........+++++|.+..|.+......+.|..+++++.....+ +-..-+.|+|+|++..|.
T Consensus 182 ~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY 261 (386)
T 3v65_B 182 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMY 261 (386)
T ss_dssp EEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEE
T ss_pred eEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEE
Confidence 46666666654333322223456899999988877776433336899999987766555 233468899999998888
Q ss_pred EEccCCCCCcEEEEECCCCeEEEeee--CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEe-ecCcee
Q 020756 140 LAGFGNLPGDMAFWDYVDGKQLGTTR--AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFH-HNGSLF 206 (321)
Q Consensus 140 ~~g~~n~~g~i~iwD~~~~~~i~~~~--~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~-~~g~~l 206 (321)
.+..+ .+.|+.+|++.......+. ......+++ ..+ .|..+.. ..+.|..++ .+|+.+
T Consensus 262 ~aD~~--~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~-~ly~td~-----~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 262 WVDAK--HHVIERANLDGSHRKAVISQGLPHPFAITV-FED-SLYWTDW-----HTKSINSANKFTGKNQ 322 (386)
T ss_dssp EEETT--TTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETT-EEEEEET-----TTTEEEEEETTTCCSC
T ss_pred EEECC--CCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECC-EEEEeeC-----CCCeEEEEECCCCcce
Confidence 88743 4789999986432222222 224556666 233 4444442 366777777 567655
No 250
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.48 E-value=0.031 Score=52.58 Aligned_cols=138 Identities=11% Similarity=0.117 Sum_probs=78.7
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGP 84 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~ 84 (321)
+.|+++++.. + .+....---.....+.|+++|+.|++.-.. .+. ....++.+...+.......+.....
T Consensus 159 ~~I~~id~~~---~-~v~~~~~~~~~P~~ia~d~~G~~lyvad~~----~~~---~~~~v~~~~~~g~~~~~~~l~~~~~ 227 (430)
T 3tc9_A 159 HPTRLIDFEK---E-YVSTVYSGLSKVRTICWTHEADSMIITNDQ----NNN---DRPNNYILTRESGFKVITELTKGQN 227 (430)
T ss_dssp EEEEEEETTT---T-EEEEEECCCSCEEEEEECTTSSEEEEEECC----SCT---TSEEEEEEEGGGTSCSEEEEEECSS
T ss_pred CcEEEEECCC---C-EEEEEecCCCCcceEEEeCCCCEEEEEeCC----CCc---ccceEEEEeCCCceeeeeeeccCCC
Confidence 4555565544 2 222222122346789999999987775210 011 1113455555554331111122334
Q ss_pred eEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---C-CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC
Q 020756 85 VHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---G-SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV 156 (321)
Q Consensus 85 v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~-~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~ 156 (321)
.++++++|++..|.++ ....++|..||..+.....+ . ...-+.++|+|+|++|.++.. ..+.|..+|.+
T Consensus 228 p~giavdp~~g~lyv~-d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~--~~~~I~~~~~d 300 (430)
T 3tc9_A 228 CNGAETHPINGELYFN-SWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV--NQHYILRSDYD 300 (430)
T ss_dssp CCCEEECTTTCCEEEE-ETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEE-ECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC--CCCEEEEEeCC
Confidence 5788999944444444 23456899999976544222 2 234568999999997777663 34789998765
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.48 E-value=0.013 Score=51.55 Aligned_cols=156 Identities=8% Similarity=0.076 Sum_probs=93.8
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceeeeecCCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGLVPLRKEG 83 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~v~l~~~~ 83 (321)
++|+++++.+ ++.+.+..+-. ......-.++|+.|.+++- .+..++.++.... ....++...++
T Consensus 65 S~v~~vD~~T---gkv~~~~~l~~-~~FgeGit~~g~~ly~ltw-----------~~~~v~v~D~~t~~~~~ti~~~~eG 129 (262)
T 3nol_A 65 SSIRKVDIES---GKTLQQIELGK-RYFGEGISDWKDKIVGLTW-----------KNGLGFVWNIRNLRQVRSFNYDGEG 129 (262)
T ss_dssp EEEEEECTTT---CCEEEEEECCT-TCCEEEEEEETTEEEEEES-----------SSSEEEEEETTTCCEEEEEECSSCC
T ss_pred ceEEEEECCC---CcEEEEEecCC-ccceeEEEEeCCEEEEEEe-----------eCCEEEEEECccCcEEEEEECCCCc
Confidence 4788888888 67666665432 2111112334666665521 1223566666432 23344443322
Q ss_pred CeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--C--C---cCeeeEEEcCCCCeEEEEccCCCCCcEEEEEC
Q 020756 84 PVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--G--S---GPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDY 155 (321)
Q Consensus 84 ~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~--~---~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~ 155 (321)
...++||+.|++.. ...+|.++|..+ +.+.++ . . ...|.+.|. +|+..+..- ....|.+.|.
T Consensus 130 ----~glt~dg~~L~~Sd--Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w---~~~~I~vIDp 199 (262)
T 3nol_A 130 ----WGLTHNDQYLIMSD--GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW---QTNKIVRIDP 199 (262)
T ss_dssp ----CCEEECSSCEEECC--SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET---TSSEEEEECT
T ss_pred ----eEEecCCCEEEEEC--CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc---cCCeEEEEEC
Confidence 33446788888853 356899999864 444444 1 1 345678887 776444443 4579999999
Q ss_pred CCCeEEEeeeCC--------------CeeeEEEccCCCEEEEEE
Q 020756 156 VDGKQLGTTRAE--------------CSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 156 ~~~~~i~~~~~~--------------~~~~~~wSpdG~~l~t~~ 185 (321)
++++.+..+... ....++|+|+++.|..++
T Consensus 200 ~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 200 ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 999988777642 235599999866555555
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.46 E-value=0.062 Score=48.89 Aligned_cols=136 Identities=6% Similarity=-0.108 Sum_probs=86.2
Q ss_pred eeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC---CcCeeeEEEcCCCCeE
Q 020756 62 SKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG---SGPYNTVRWNPKGKFL 138 (321)
Q Consensus 62 ~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~---~~~~~~~~~sPdG~~l 138 (321)
..|+.++.+|.....+....-....+++++|.+..+.+......+.|..+++++.....+. -..-+.++++|++..|
T Consensus 138 ~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~l 217 (349)
T 3v64_C 138 SRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRM 217 (349)
T ss_dssp TEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEE
T ss_pred CeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEE
Confidence 3577777777643333222334568999999887777764332378999999887666652 3346789999999988
Q ss_pred EEEccCCCCCcEEEEECCCCeEEEeee--CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEe-ecCcee
Q 020756 139 CLAGFGNLPGDMAFWDYVDGKQLGTTR--AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFH-HNGSLF 206 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~~i~~~~--~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~-~~g~~l 206 (321)
..+..+ .+.|+.+|++.......+. ......++. ..+ +|..+.. ..+.|..++ .+|+.+
T Consensus 218 Y~aD~~--~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~-~ly~td~-----~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 218 YWVDAK--HHVIERANLDGSHRKAVISQGLPHPFAITV-FED-SLYWTDW-----HTKSINSANKFTGKNQ 279 (349)
T ss_dssp EEEETT--TTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETT-EEEEEET-----TTTEEEEEETTTCCSC
T ss_pred EEEECC--CCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECC-EEEEecC-----CCCeEEEEEccCCCcc
Confidence 888743 4789999987432222221 224555666 233 4444443 266677777 567654
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.44 E-value=0.011 Score=52.88 Aligned_cols=119 Identities=11% Similarity=0.079 Sum_probs=75.1
Q ss_pred CeEEEEECc-CCCEEEEEEc---------------cCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEEEccCC
Q 020756 84 PVHDVQWSY-SGSEFAVVYG---------------FMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCLAGFGN 145 (321)
Q Consensus 84 ~v~~~~wsP-~g~~l~~~~g---------------~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~n 145 (321)
..+++++.| +|+.++.-.+ ...+.+..||..+..+..+ .....+.++|+|+|++|.++..
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~-- 204 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEF-- 204 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEG--
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeC--
Confidence 478999999 9975554211 1125788888865544333 2244577999999998877753
Q ss_pred CCCcEEEEECCCC-----eEEEeeeCCCeeeEEEccCCCEEEEEEcCCce-----eecCcEEEEeecCceeE
Q 020756 146 LPGDMAFWDYVDG-----KQLGTTRAECSVTSEWSPDGRYFMTATTAPRL-----QIDNGIKIFHHNGSLFF 207 (321)
Q Consensus 146 ~~g~i~iwD~~~~-----~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl-----~~d~~v~iw~~~g~~l~ 207 (321)
..+.|.+||+... +.+.... ....++++++|+++++... .|. ...+.|..++.+|+.+.
T Consensus 205 ~~~~I~~~~~~~~~~~~~~~~~~~~--gP~gi~~d~~G~l~va~~~-~~~~~~~~~~~~~v~~~d~~G~~~~ 273 (322)
T 2fp8_A 205 LSHQIVKYWLEGPKKGTAEVLVKIP--NPGNIKRNADGHFWVSSSE-ELDGNMHGRVDPKGIKFDEFGNILE 273 (322)
T ss_dssp GGTEEEEEESSSTTTTCEEEEEECS--SEEEEEECTTSCEEEEEEE-ETTSSTTSCEEEEEEEECTTSCEEE
T ss_pred CCCeEEEEECCCCcCCccceEEeCC--CCCCeEECCCCCEEEEecC-cccccccCCCccEEEEECCCCCEEE
Confidence 3478999998742 2222222 2667899999986666542 000 01355777777777663
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.43 E-value=0.057 Score=47.79 Aligned_cols=132 Identities=8% Similarity=-0.049 Sum_probs=79.9
Q ss_pred eEEEEECcCCCEEEEEEccCCCeEEEEeCCCc--eeEEe-----------CCcCeeeEEEcCCCCeEEEEccCCCCCcEE
Q 020756 85 VHDVQWSYSGSEFAVVYGFMPASATIFNKKCR--PILEL-----------GSGPYNTVRWNPKGKFLCLAGFGNLPGDMA 151 (321)
Q Consensus 85 v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~--~~~~~-----------~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~ 151 (321)
...++..+++ .+.+. ....+.|.++|.... .+... .....+.+ +|+|++|.++.. ..+.|+
T Consensus 119 ~~g~~~~~~~-~~~v~-d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~--~~~~I~ 192 (306)
T 2p4o_A 119 LNGITPLSDT-QYLTA-DSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT--EKMLLL 192 (306)
T ss_dssp EEEEEESSSS-EEEEE-ETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET--TTTEEE
T ss_pred cCcccccCCC-cEEEE-ECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC--CCCEEE
Confidence 3455545544 34443 334568888887642 22211 11234456 899998888764 347999
Q ss_pred EEECCC-CeE--EEee-eCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeE--Eec--cCceEEEEEe---
Q 020756 152 FWDYVD-GKQ--LGTT-RAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFF--KKM--FDKLFQAEWK--- 220 (321)
Q Consensus 152 iwD~~~-~~~--i~~~-~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~--~~~--~~~~~~~~w~--- 220 (321)
.+|++. ++. ...+ .......++++++|+++++.. ..+.|.+++.+|++.. ... ......++|.
T Consensus 193 ~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~------~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~ 266 (306)
T 2p4o_A 193 RIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATH------IYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTE 266 (306)
T ss_dssp EEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECB------TTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCST
T ss_pred EEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeC------CCCeEEEECCCCCEEEEeecccccCCceEEEEeccc
Confidence 999874 321 1111 112456689999998655554 3678999998887642 222 2467888887
Q ss_pred cCCCCCCC
Q 020756 221 PVSPDKFG 228 (321)
Q Consensus 221 P~~~~~~~ 228 (321)
|+...+|-
T Consensus 267 ~d~~~LyV 274 (306)
T 2p4o_A 267 GDCTAIYV 274 (306)
T ss_dssp TTTTEEEE
T ss_pred CCCCEEEE
Confidence 77666663
No 255
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.40 E-value=0.00055 Score=63.51 Aligned_cols=90 Identities=7% Similarity=-0.086 Sum_probs=67.2
Q ss_pred eEEEEeCCC-ceeEEe--CCcCeeeEEEcCCCCeEEEEccC-------CCCCcEEEEECCCCeEEEeeeCC---------
Q 020756 107 SATIFNKKC-RPILEL--GSGPYNTVRWNPKGKFLCLAGFG-------NLPGDMAFWDYVDGKQLGTTRAE--------- 167 (321)
Q Consensus 107 ~i~i~d~~~-~~~~~~--~~~~~~~~~~sPdG~~l~~~g~~-------n~~g~i~iwD~~~~~~i~~~~~~--------- 167 (321)
++.++|... +.+.++ +..+ .+.+||||++|.++..+ ..++.|.+||+.+++.+.++.-+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 788999865 455555 5556 79999999999988521 23578999999999988887532
Q ss_pred CeeeEEEccCCCEEEEEEcCCceeecCcEEE--Eeec
Q 020756 168 CSVTSEWSPDGRYFMTATTAPRLQIDNGIKI--FHHN 202 (321)
Q Consensus 168 ~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~i--w~~~ 202 (321)
....+.+||||++++.+... ..+.+.+ +|..
T Consensus 125 ~P~~ia~SpDGk~lyVan~~----~~~~v~V~~iD~~ 157 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFG----SSAAAGLSVPGAS 157 (368)
T ss_dssp CTTSEEECTTSSCEEEEECS----SSCEEEEEETTTE
T ss_pred CcceEEEcCCCCEEEEEccC----CCCeEEEEEEchh
Confidence 46679999999999988731 1345666 7663
No 256
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.35 E-value=0.018 Score=57.62 Aligned_cols=57 Identities=18% Similarity=0.267 Sum_probs=43.4
Q ss_pred CcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEec
Q 020756 148 GDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKKM 210 (321)
Q Consensus 148 g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~~ 210 (321)
|.|..||+.+++.+-.+... ......++.+|.++++++ .|+.+++||. +|+.+....
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~------~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGT------ADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEEC------CCCcEEEEECCCCceeeeee
Confidence 78999999999887666543 344456778888888876 4999999998 688875543
No 257
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.26 E-value=0.0078 Score=52.77 Aligned_cols=135 Identities=13% Similarity=0.130 Sum_probs=90.3
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK 159 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~ 159 (321)
..+..++|+|+++.|.++. +.++.|..+|..++.+..+ +......|++.++|+++++.- .++.+.++++....
T Consensus 27 ~~lSGla~~~~~~~L~aV~-d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E---~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTI-NKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDE---RDYAIYVISLTPNS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEE-ETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEET---TTTEEEEEEECTTC
T ss_pred cCcceeEEeCCCCEEEEEE-CCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEEC---CCCcEEEEEcCCCC
Confidence 4689999999888777664 4477899999987777766 345778899999998766654 55789999876442
Q ss_pred ---EEEeeeC-----C---CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc----ee--EE-------eccCceE
Q 020756 160 ---QLGTTRA-----E---CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS----LF--FK-------KMFDKLF 215 (321)
Q Consensus 160 ---~i~~~~~-----~---~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~----~l--~~-------~~~~~~~ 215 (321)
.+....- . ..-.++|+|++..|.++.- .....||.++|- .+ .. .....+.
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E------~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKE------KNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEE------SSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEEC------cCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 2222221 1 2356999999977777662 344567777542 11 11 1223567
Q ss_pred EEEEecCCCCCC
Q 020756 216 QAEWKPVSPDKF 227 (321)
Q Consensus 216 ~~~w~P~~~~~~ 227 (321)
.++++|....++
T Consensus 177 ~l~~dp~tg~ll 188 (255)
T 3qqz_A 177 GAEFNQQKNTLL 188 (255)
T ss_dssp EEEEETTTTEEE
T ss_pred eEEEcCCCCeEE
Confidence 888888765554
No 258
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.26 E-value=0.0021 Score=64.63 Aligned_cols=157 Identities=11% Similarity=0.028 Sum_probs=95.5
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC---ceeeeecC-CCCCeEEEEECcCCCEEEEEEccCC
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT---HEGLVPLR-KEGPVHDVQWSYSGSEFAVVYGFMP 105 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~---~~~~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~ 105 (321)
....+.|++.+..|++. |.. ...|+.++.++. ......+. .......+++.+.+..|.++ ....
T Consensus 407 ~p~gla~d~~~~~Ly~s-----D~~------~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~t-D~~~ 474 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWS-----DLS------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWT-DSVL 474 (699)
T ss_dssp TCCCCEEETTTTEEEEC-----CTT------TTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEEC-CTTT
T ss_pred ceEEEccccccCeEEEE-----ecC------CCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEE-eccC
Confidence 34567888877777663 211 123666666651 11111111 11234578888766666664 3345
Q ss_pred CeEEEEeCCCceeEEeC---CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe--EEEeeeCCCeeeEEEccCCCE
Q 020756 106 ASATIFNKKCRPILELG---SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK--QLGTTRAECSVTSEWSPDGRY 180 (321)
Q Consensus 106 ~~i~i~d~~~~~~~~~~---~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpdG~~ 180 (321)
+.|.++++.+..+..+. ....+.+++.|.+.+|..+..+ ..+.|++++++... .+..........++|+|++.+
T Consensus 475 ~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~ 553 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGR 553 (699)
T ss_dssp SCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS-SSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCC
T ss_pred CeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC-CCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCE
Confidence 68999999887666552 2445789999988887776532 23689888875332 221111224567999999877
Q ss_pred EEEEEcCCceeecCcEEEEeecCc
Q 020756 181 FMTATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 181 l~t~~s~~rl~~d~~v~iw~~~g~ 204 (321)
|..+-+ ..+.|..++++|.
T Consensus 554 LY~aD~-----~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 554 LYWVDS-----KLHSISSIDVNGG 572 (699)
T ss_dssp EEEEET-----TTTEEEEECSSSS
T ss_pred EEEEec-----CCCeEEEEccCCC
Confidence 777775 3667888888774
No 259
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.25 E-value=0.097 Score=53.24 Aligned_cols=136 Identities=9% Similarity=0.008 Sum_probs=87.9
Q ss_pred eEEEEEcCCCc---eeeeecC-CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCC
Q 020756 63 KLNYLTTDGTH---EGLVPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKG 135 (321)
Q Consensus 63 ~l~~l~~~g~~---~~~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG 135 (321)
.|+.+.+++.. .....+. .......+++.+.++.|.++. ...+.|.++++++.....+ .......|++.|.+
T Consensus 447 ~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD-~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~ 525 (791)
T 3m0c_C 447 MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH 525 (791)
T ss_dssp EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE-TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTT
T ss_pred eEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe-cCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCC
Confidence 36666666531 1111112 234556899998888888763 3456999999988766555 33456789999998
Q ss_pred CeEEEEccCCCCCcEEEEECCCCeEEEeeeC--CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCce
Q 020756 136 KFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA--ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSL 205 (321)
Q Consensus 136 ~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~ 205 (321)
.+|..+..++ .+.|++.+++.......+.. .....|++++++..|..+-. ..+.|...+++|..
T Consensus 526 g~LYwtD~g~-~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~-----~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 526 GFMYWTDWGT-PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS-----KLHSISSIDVNGGN 591 (791)
T ss_dssp TEEEEEECSS-SCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCS
T ss_pred CCEEEecCCC-CCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeC-----CCCcEEEEecCCCc
Confidence 8888876432 36899999965443333332 26778999988887777764 25667777776653
No 260
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.21 E-value=0.011 Score=56.77 Aligned_cols=155 Identities=12% Similarity=0.125 Sum_probs=92.5
Q ss_pred cceEEeCC-CCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee-ecCC--CCCeEEEEE-------CcCCCEEEE
Q 020756 31 TVQLNWNR-GSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV-PLRK--EGPVHDVQW-------SYSGSEFAV 99 (321)
Q Consensus 31 ~~~~~Wsp-~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v-~l~~--~~~v~~~~w-------sP~g~~l~~ 99 (321)
..-|.+.| ++..|+++.. +...|..|+..+.....+ .... .....+++| +++|+.|++
T Consensus 141 p~~la~dp~~~~~Lyv~~~-----------~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyv 209 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYD-----------GHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIV 209 (496)
T ss_dssp EEEEEEETTEEEEEEEEEE-----------TEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEE
T ss_pred CCEEEEccCCCCEEEEEEC-----------CCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEE
Confidence 34667777 3555555421 123477787766433322 2211 224789999 999996666
Q ss_pred EEccC-----CCeEEEEeCCC--cee-----EEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC-------CCe
Q 020756 100 VYGFM-----PASATIFNKKC--RPI-----LEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV-------DGK 159 (321)
Q Consensus 100 ~~g~~-----~~~i~i~d~~~--~~~-----~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~-------~~~ 159 (321)
..... ...+.+++... ... ..+ .-...+.++.+|++.+|.++.. ..+.|+.+|++ ++.
T Consensus 210 ad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~--~~g~V~r~d~~~~~~~~~tg~ 287 (496)
T 3kya_A 210 AIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSY--EKGQVFRLDLVDYFKTIKNGG 287 (496)
T ss_dssp EECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEET--TTTEEEEECHHHHHHHHHTTC
T ss_pred EeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEEC--CCCEEEEEecccccccccCce
Confidence 53221 12466775432 111 122 1234567889998777777764 34789999987 443
Q ss_pred E--------------EEeeeC-CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 160 Q--------------LGTTRA-ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 160 ~--------------i~~~~~-~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
. +..... .....++|+|+|++|..+-+ ..+.|+.+++++
T Consensus 288 ~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~-----~~h~I~kid~dg 341 (496)
T 3kya_A 288 SWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI-----NNHYFMRSDYDE 341 (496)
T ss_dssp CCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET-----TTTEEEEEEEET
T ss_pred eecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC-----CCCEEEEEecCC
Confidence 2 222222 24678999999997777665 367788877765
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.13 E-value=0.013 Score=51.48 Aligned_cols=152 Identities=9% Similarity=-0.063 Sum_probs=94.0
Q ss_pred EEEEEcCCC-ceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEeCCcCeeeEEEcCCCCeEEEE
Q 020756 64 LNYLTTDGT-HEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILELGSGPYNTVRWNPKGKFLCLA 141 (321)
Q Consensus 64 l~~l~~~g~-~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~~~~sPdG~~l~~~ 141 (321)
|..++...+ ....+ ++. ........++|+.|.++ .-.++.+.+||.+ .+.+.++.-.. ......+||+.|+.+
T Consensus 77 v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~Ly~l-tw~~~~v~V~D~~Tl~~~~ti~~~~-eGwGLt~Dg~~L~vS 151 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLG--NIFAEGLASDGERLYQL-TWTEGLLFTWSGMPPQRERTTRYSG-EGWGLCYWNGKLVRS 151 (268)
T ss_dssp EEECCSSCSSCSEEE-ECT--TCCEEEEEECSSCEEEE-ESSSCEEEEEETTTTEEEEEEECSS-CCCCEEEETTEEEEE
T ss_pred EEEEECCCCcEEeEE-CCC--CcceeEEEEeCCEEEEE-EccCCEEEEEECCcCcEEEEEeCCC-ceeEEecCCCEEEEE
Confidence 566665433 22333 443 22222234456666665 3457799999985 45666662211 112333678888887
Q ss_pred ccCCCCCcEEEEECCCCeEEEeeeCC-------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEecc--
Q 020756 142 GFGNLPGDMAFWDYVDGKQLGTTRAE-------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKKMF-- 211 (321)
Q Consensus 142 g~~n~~g~i~iwD~~~~~~i~~~~~~-------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~~~-- 211 (321)
. ..+.|.++|..+++.+..+.-. .+..++|. +|+.++..- .++.|.+-|. +|+.+.....
T Consensus 152 d---Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw------~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 152 D---GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIW------HSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp C---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TCSEEEEECTTTCBEEEEEECHH
T ss_pred C---CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEEC------CCCeEEEEeCCCCcEEEEEECCC
Confidence 6 4689999999999877665431 44567888 886443332 3678888887 5555433221
Q ss_pred -------------CceEEEEEecCCCCCCCCc
Q 020756 212 -------------DKLFQAEWKPVSPDKFGDI 230 (321)
Q Consensus 212 -------------~~~~~~~w~P~~~~~~~~~ 230 (321)
+.+..++|.|+...+|-..
T Consensus 222 L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 222 LTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp HHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 3567899999988888664
No 262
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.12 E-value=0.045 Score=51.58 Aligned_cols=151 Identities=13% Similarity=0.151 Sum_probs=87.0
Q ss_pred cceEEeCCC--CCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEc-c-C-C
Q 020756 31 TVQLNWNRG--STGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYG-F-M-P 105 (321)
Q Consensus 31 ~~~~~Wsp~--G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g-~-~-~ 105 (321)
...+.|+|+ +..|++. |.. ..|+.++..+.....+ .......++++|+++|+ |.++.. . . .
T Consensus 141 P~gvavd~~s~~g~Lyv~---D~~---------~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~-lyVad~~~~~~~ 206 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWV---GQR---------DAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGD-MVVVDDQSSDTN 206 (433)
T ss_dssp CCEEEECTTTTTCEEEEE---CBT---------SCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCC-EEEEECCSCTTS
T ss_pred CceEEEccccCCCEEEEE---eCC---------CCEEEEECCCCEEEEe-ecCCCCccEEEECCCCC-EEEEcCCCCccc
Confidence 447788885 4444443 111 3477887744422222 23445688999999999 555421 1 1 1
Q ss_pred CeEEEEeCCCcee--EEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEee-eC---CCeeeEEEccCC
Q 020756 106 ASATIFNKKCRPI--LEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTT-RA---ECSVTSEWSPDG 178 (321)
Q Consensus 106 ~~i~i~d~~~~~~--~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~-~~---~~~~~~~wSpdG 178 (321)
..+..++..+... ..+ .....+.++++|++..|.++.. ..+.|+.+|..++..+..+ .. .....++|+|+|
T Consensus 207 ~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~--~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG 284 (433)
T 4hw6_A 207 TGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRY--HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTG 284 (433)
T ss_dssp EEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBT--TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTS
T ss_pred ceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEEC--CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCC
Confidence 1244444322211 122 2334567899994444555543 4478999999877652222 21 133469999999
Q ss_pred CEEEEEEcCCceeecCcEEEEeec
Q 020756 179 RYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 179 ~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
++|..+.. ..+.|+.++++
T Consensus 285 ~~LYvad~-----~~~~I~~~~~d 303 (433)
T 4hw6_A 285 DWAYIIYN-----GKHCIYRVDYN 303 (433)
T ss_dssp SEEEEEET-----TTTEEEEEEBC
T ss_pred CEEEEEeC-----CCCEEEEEeCC
Confidence 97777765 36778888875
No 263
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.07 E-value=0.00016 Score=66.82 Aligned_cols=176 Identities=11% Similarity=0.004 Sum_probs=78.5
Q ss_pred CceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcC-CCceeeeecCCC
Q 020756 4 PASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTD-GTHEGLVPLRKE 82 (321)
Q Consensus 4 p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~-g~~~~~v~l~~~ 82 (321)
.+.|..|+..+ ++.+.+... ..........+|..+++. . ....|+.++.. |...-.......
T Consensus 18 dg~v~a~d~~t---G~~~W~~~~--~~~~s~p~~~~g~~~v~~-s-----------~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 18 DGSLHAVSKRT---GSIKWTLKE--DPVLQVPTHVEEPAFLPD-P-----------NDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp TSEEEEEETTT---CCEEEEEEC--CCSCCCC-----CCEEEC-T-----------TTCCEEEC-----CCSEECSCCHH
T ss_pred CCEEEEEECCC---CCEEEEecC--CCceecceEcCCCEEEEe-C-----------CCCEEEEEECCCCceeeeeeccCc
Confidence 56788899888 777777665 233233334455443321 0 12236666663 321111111100
Q ss_pred CCeE-EEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEeCCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeE
Q 020756 83 GPVH-DVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILELGSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQ 160 (321)
Q Consensus 83 ~~v~-~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~ 160 (321)
..+. ..... ++..+++ +..++.+..||.+ ++.+..+.... ...++|++..|++++ .++.|+.||.++++.
T Consensus 81 ~~~~~sp~~~-~~~~v~~--g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~---~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 81 ELVQASPCRS-SDGILYM--GKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGR---TEYTITMYDTKTREL 152 (369)
T ss_dssp HHHTTCSCC------CCC--CEEEEEEEEECCC------------------------EEEEE---EEEEEECCCSSSSSC
T ss_pred cccccCceEe-cCCEEEE--EeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEe---cCCEEEEEECCCCCE
Confidence 0000 00111 2334443 4556789999986 44544442211 345678899998887 778999999999876
Q ss_pred EEeeeCCCeeeEEEccCC---CEEEEEEcCCceeecCcEEEEee-cCceeEEec
Q 020756 161 LGTTRAECSVTSEWSPDG---RYFMTATTAPRLQIDNGIKIFHH-NGSLFFKKM 210 (321)
Q Consensus 161 i~~~~~~~~~~~~wSpdG---~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~~ 210 (321)
+-.+.........++.++ ..+++++. ++.+..||. +|+.+.+..
T Consensus 153 ~W~~~~~~~~~~~~~~~~~~~~~v~~~~~------dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 153 RWNATYFDYAASLPEDDVDYKMSHFVSNG------DGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CCEEEEEEECCBCCCCCTTCCCCEEEEET------SCEEEEECTTTCCEEEEEE
T ss_pred EEeEecccccCccccCCccccceEEEECC------CCEEEEEECCCCcEEEEec
Confidence 544432222223344432 34555553 888999998 677775443
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.06 E-value=0.1 Score=48.43 Aligned_cols=158 Identities=8% Similarity=-0.065 Sum_probs=99.1
Q ss_pred eeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc----eeEEe---CCcCeeeEEEcCC
Q 020756 62 SKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR----PILEL---GSGPYNTVRWNPK 134 (321)
Q Consensus 62 ~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~----~~~~~---~~~~~~~~~~sPd 134 (321)
..|..++.++.....+ +.....+..++|++.+..|.++. ...+.|..+++.+. ....+ .......+++.+.
T Consensus 92 ~~I~~i~l~~~~~~~~-~~~~~~~~~l~~d~~~~~lywsD-~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSD-LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp TEEEEECTTSCSCEEE-ECSCSCEEEEEEETTTTEEEEEE-TTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred ceeEEEccCCcceeEe-ccccCcceEEeeeeccCceEEEe-cCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 3466777766533322 34456788999999888777763 34568888888652 12222 3345677899987
Q ss_pred CCeEEEEccCCCCCcEEEEECCCCeEEEeeeC--CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeEE---e
Q 020756 135 GKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA--ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFFK---K 209 (321)
Q Consensus 135 G~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~~---~ 209 (321)
++.|..+.. ..+.|.+.|++.......+.. .....++.+|.+.+|..+... ....|...+.+|..... .
T Consensus 170 ~~~lY~~d~--~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 170 HSNIYWTDS--VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp TTEEEEEET--TTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS----SSCCEEEEETTSCSCEEEECS
T ss_pred CCceEEEEC--CCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC----CCCEEEEEeCCCCccEEEEEC
Confidence 777777663 347899999976543333332 257789999977777665521 13567777777754322 2
Q ss_pred ccCceEEEEEecCCCCCC
Q 020756 210 MFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 210 ~~~~~~~~~w~P~~~~~~ 227 (321)
.......+++.|+...+|
T Consensus 244 ~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp SCSCEEEEEEETTTTEEE
T ss_pred CCCceEEEEEEeCCCEEE
Confidence 334566778887766665
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.06 E-value=0.14 Score=48.23 Aligned_cols=160 Identities=9% Similarity=0.154 Sum_probs=88.0
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASAT 109 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~ 109 (321)
....+.|+++|+ |++.. .. +.. ....++.+...+.......+.......+++++|++..|.++ ....+.|.
T Consensus 183 ~P~giavd~dG~-lyVad-~~----~~~--~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~-d~~~~~V~ 253 (433)
T 4hw6_A 183 QCADVNFTLNGD-MVVVD-DQ----SSD--TNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYT-RYHHAMIS 253 (433)
T ss_dssp CEEEEEECTTCC-EEEEE-CC----SCT--TSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEEC-BTTCSEEE
T ss_pred CccEEEECCCCC-EEEEc-CC----CCc--ccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEE-ECCCCEEE
Confidence 466889999999 55532 11 100 11224444443332211111123345678999944444443 23456899
Q ss_pred EEeCCCcee-EEe---CC-cCeeeEEEcCCCCeEEEEccCCCCCcEEEEECC--CCe-----EEEee-e-----------
Q 020756 110 IFNKKCRPI-LEL---GS-GPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYV--DGK-----QLGTT-R----------- 165 (321)
Q Consensus 110 i~d~~~~~~-~~~---~~-~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~--~~~-----~i~~~-~----------- 165 (321)
.+|.....+ ..+ +. .....++|+|+|++|.++.. ..+.|..+|++ ++. .+.-. .
T Consensus 254 ~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~--~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~ 331 (433)
T 4hw6_A 254 SYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN--GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTG 331 (433)
T ss_dssp EECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET--TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGG
T ss_pred EEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC--CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccc
Confidence 999863322 222 22 22346999999997777763 34789998865 232 11110 0
Q ss_pred --CCCeeeEEE---------ccCCCEEEEEEcCCceeecCcEEEEeecCcee
Q 020756 166 --AECSVTSEW---------SPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF 206 (321)
Q Consensus 166 --~~~~~~~~w---------SpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l 206 (321)
-.....+++ .++|.++++-. ..+.|+.++.+|...
T Consensus 332 a~~~~P~giav~~n~~y~~dd~~g~lyvaD~------~n~~I~~~~~~G~v~ 377 (433)
T 4hw6_A 332 ARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR------DSHTVRVLTPEGRVT 377 (433)
T ss_dssp SBCSSEEEEEEEECGGGTTSSCCEEEEEEET------TTTEEEEECTTSEEE
T ss_pred eEEcCCccEEEEccccccccCCCCcEEEEEC------CCCEEEEECCCCCEE
Confidence 013455888 67777655544 367788888777544
No 266
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.05 E-value=0.11 Score=45.11 Aligned_cols=156 Identities=12% Similarity=0.048 Sum_probs=92.8
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCC-ceeeeecCCCC
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGT-HEGLVPLRKEG 83 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~-~~~~v~l~~~~ 83 (321)
++|+++++.+ ++.+.+..+-.. .....-...|+.|.+++- .+..++.++.... ....++...++
T Consensus 43 S~v~~vD~~t---gkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw-----------~~~~v~v~D~~tl~~~~ti~~~~~G 107 (243)
T 3mbr_X 43 SSVRKVDLET---GRILQRAEVPPP-YFGAGIVAWRDRLIQLTW-----------RNHEGFVYDLATLTPRARFRYPGEG 107 (243)
T ss_dssp CEEEEEETTT---CCEEEEEECCTT-CCEEEEEEETTEEEEEES-----------SSSEEEEEETTTTEEEEEEECSSCC
T ss_pred ceEEEEECCC---CCEEEEEeCCCC-cceeEEEEeCCEEEEEEe-----------eCCEEEEEECCcCcEEEEEeCCCCc
Confidence 5899999988 677766654321 111111223566666521 1233666776443 23344443332
Q ss_pred CeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-ceeEEe--C-----CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEEC
Q 020756 84 PVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-RPILEL--G-----SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDY 155 (321)
Q Consensus 84 ~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~-----~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~ 155 (321)
....++++.|.+.. ...+|.++|..+ +.+.++ . -...|.+.|. +|+..+..- ....|.+.|.
T Consensus 108 ----wglt~dg~~L~vSd--gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw---~s~~I~vIDp 177 (243)
T 3mbr_X 108 ----WALTSDDSHLYMSD--GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW---LTSRIARIDP 177 (243)
T ss_dssp ----CEEEECSSCEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET---TTTEEEEECT
T ss_pred ----eEEeeCCCEEEEEC--CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC---CCCeEEEEEC
Confidence 23346788888763 367999999865 344444 1 1356788887 676554443 3569999999
Q ss_pred CCCeEEEeeeCC---------------CeeeEEEccCCCEEEEEE
Q 020756 156 VDGKQLGTTRAE---------------CSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 156 ~~~~~i~~~~~~---------------~~~~~~wSpdG~~l~t~~ 185 (321)
++++.+..+... ....++|+|+++.|..++
T Consensus 178 ~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 178 ASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 999888776522 234599999755555444
No 267
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.98 E-value=0.24 Score=48.89 Aligned_cols=157 Identities=8% Similarity=-0.025 Sum_probs=103.6
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASAT 109 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~ 109 (321)
....+.|.+.+..|++. |. ....|+.++.+|.....+..........++.++.+..|.++. ...+.|.
T Consensus 38 ~~~~l~~d~~~~~lywt---D~--------~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD-~~~~~I~ 105 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWT---DI--------SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWAD-TGTNRIE 105 (628)
T ss_dssp CEEEEEEETTTTEEEEE---ET--------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE-TTTTEEE
T ss_pred ceEEEEEECCCCEEEEE---EC--------CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEE-CCCCEEE
Confidence 45577888887777664 11 223477778777533333212224567888988888887763 3456899
Q ss_pred EEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeC-CCeeeEEEccCCCEEEEEE
Q 020756 110 IFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA-ECSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 110 i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~-~~~~~~~wSpdG~~l~t~~ 185 (321)
+.++++.....+ ....-+.++..|...+|..+..+ ..+.|+..+++.......... .....++++++++.|..+-
T Consensus 106 v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 106 VSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp EEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEE
T ss_pred EEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEE
Confidence 999987655444 23445789999977777777643 247899998864432222222 3677899999988888877
Q ss_pred cCCceeecCcEEEEeecCc
Q 020756 186 TAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 186 s~~rl~~d~~v~iw~~~g~ 204 (321)
. ..+.|..++++|.
T Consensus 185 ~-----~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 185 L-----DTNLIESSNMLGL 198 (628)
T ss_dssp T-----TTTEEEEEETTSC
T ss_pred C-----CCCEEEEEcCCCC
Confidence 5 3667888888764
No 268
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.94 E-value=0.048 Score=48.02 Aligned_cols=127 Identities=15% Similarity=0.126 Sum_probs=80.8
Q ss_pred eEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeEEEcCCCCeEEE
Q 020756 63 KLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTVRWNPKGKFLCL 140 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~sPdG~~l~~ 140 (321)
.|+.++..|...-... .....+.++...++|..++ +..++.+..||..+..+..+ ....+.++...++|.+.+.
T Consensus 118 ~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~~g~l~v---gt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~v~ 193 (330)
T 3hxj_A 118 HLYAINTDGTEKWRFK-TKKAIYATPIVSEDGTIYV---GSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFG 193 (330)
T ss_dssp EEEEECTTSCEEEEEE-CSSCCCSCCEECTTSCEEE---ECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEE
T ss_pred EEEEEcCCCCEEEEEc-CCCceeeeeEEcCCCEEEE---EcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEEEE
Confidence 4777776633221222 1233456667777777443 35567899999886555444 4556777888888875543
Q ss_pred EccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeE
Q 020756 141 AGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFF 207 (321)
Q Consensus 141 ~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~ 207 (321)
+ +.|..+| .+++.+-..... .+..+..+++|...+ ++. ++++..++.+|..+.
T Consensus 194 t------~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~------~~gl~~~~~~g~~~~ 248 (330)
T 3hxj_A 194 S------DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSL------DGHLYAINPDGTEKW 248 (330)
T ss_dssp S------SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEE-EET------TTEEEEECTTSCEEE
T ss_pred e------CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEE-EcC------CCeEEEECCCCCEeE
Confidence 3 6799999 677665544432 567788889987554 442 678888887777663
No 269
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.83 E-value=0.017 Score=52.95 Aligned_cols=143 Identities=11% Similarity=0.101 Sum_probs=83.9
Q ss_pred CeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEEe-----CCcCeeeEEEcCC---CCeEEEEccC-CCC----Cc
Q 020756 84 PVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILEL-----GSGPYNTVRWNPK---GKFLCLAGFG-NLP----GD 149 (321)
Q Consensus 84 ~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~~-----~~~~~~~~~~sPd---G~~l~~~g~~-n~~----g~ 149 (321)
.-.+++|.|+|+.+++ ..+++|.++|..+. .+..+ +......++++|+ +..|.++... ..+ ..
T Consensus 30 ~P~~ia~~pdG~l~V~---e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT---ERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CEEEEEEEETTEEEEE---ETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCeEEEEcCCCeEEEE---eCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4568999999984444 44589999986554 22222 2345788999998 5555554311 012 56
Q ss_pred EEEEECCCC-------eEE-Eeee---CCCeeeEEEccCCCEEEEEEcCCce-------eecCcEEEEeecCc-------
Q 020756 150 MAFWDYVDG-------KQL-GTTR---AECSVTSEWSPDGRYFMTATTAPRL-------QIDNGIKIFHHNGS------- 204 (321)
Q Consensus 150 i~iwD~~~~-------~~i-~~~~---~~~~~~~~wSpdG~~l~t~~s~~rl-------~~d~~v~iw~~~g~------- 204 (321)
|..|+.... +.+ ..+. .|....+.|+|||.++++.+..-.. ...+.|.-++.+|.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 888887643 111 2222 2456679999999877765421000 01234555555664
Q ss_pred ---eeEEeccCceEEEEEecCCCCCCCC
Q 020756 205 ---LFFKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 205 ---~l~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.++.......+.++|.|+...+|..
T Consensus 187 ~~~~i~a~G~rnp~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 187 PNSPIWSYGHRNPQGIDWHRASGVMVAT 214 (354)
T ss_dssp TTCCEEEECCSCCCEEEECTTTCCEEEE
T ss_pred CCCcEEEEccCCcceEEEeCCCCCEEEE
Confidence 3444444566788999965556643
No 270
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.81 E-value=0.29 Score=44.70 Aligned_cols=182 Identities=12% Similarity=0.143 Sum_probs=102.5
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEE--eCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee-----
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLN--WNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV----- 77 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~--Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v----- 77 (321)
+-+.||++ + ++.+..........+++. +.-.|+.+-+...++.+.-. ....+|.++........+
T Consensus 50 ~gL~Vydl-~---G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~----n~l~vf~iDp~~~~l~~i~~~~~ 121 (355)
T 3amr_A 50 SGLVVYSL-D---GKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGK----NTIEIYAIDGKNGTLQSMTDPDH 121 (355)
T ss_dssp TEEEEEET-T---SCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTC----CEEEEEEECTTTCCEEECSCTTS
T ss_pred CCEEEEcC-C---CcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCC----CeEEEEEECCCCCceeecccccc
Confidence 56888888 5 677766654333344443 33345542222112211001 112244444222222222
Q ss_pred ecCCC-CCeEEEEE--CcC-CCEEEEEEccCCCeEEEEeCC--------CceeEEeC-CcCeeeEEEcCCCCeEEEEccC
Q 020756 78 PLRKE-GPVHDVQW--SYS-GSEFAVVYGFMPASATIFNKK--------CRPILELG-SGPYNTVRWNPKGKFLCLAGFG 144 (321)
Q Consensus 78 ~l~~~-~~v~~~~w--sP~-g~~l~~~~g~~~~~i~i~d~~--------~~~~~~~~-~~~~~~~~~sPdG~~l~~~g~~ 144 (321)
++... ..++.++. +|. |+..+++. ..++.+..|++. .+.+.+|. ......+...+....|.++-
T Consensus 122 pv~t~~~~pyGlcly~~~~~g~~yafV~-~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~e-- 198 (355)
T 3amr_A 122 PIATAINEVYGFTLYHSQKTGKYYAMVT-GKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAE-- 198 (355)
T ss_dssp CEECCCSSCCCEEEEECTTTCCEEEEEE-CSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEE--
T ss_pred CcCCCCCCeeEEEEEecCCCCcEEEEEE-CCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEec--
Confidence 11122 45667777 785 55455553 456888888761 23556662 45677888999888999987
Q ss_pred CCCCcEEEEECC-----CCeEEEeeeCC----CeeeEEE--ccCCC-EEEEEEcCCceeecCcEEEEeecC
Q 020756 145 NLPGDMAFWDYV-----DGKQLGTTRAE----CSVTSEW--SPDGR-YFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 145 n~~g~i~iwD~~-----~~~~i~~~~~~----~~~~~~w--SpdG~-~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
.+..|+.+|.+ +++.+..+... .+-.++. .++|+ ||++++- .++.+.+|+..+
T Consensus 199 -Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ-----G~~s~~Vydr~~ 263 (355)
T 3amr_A 199 -EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ-----GNSSYAIYDRQG 263 (355)
T ss_dssp -TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG-----GGTEEEEEESST
T ss_pred -ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC-----CCCEEEEEECCC
Confidence 55568888865 35566555322 3444555 67888 6666663 478999999864
No 271
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.80 E-value=0.17 Score=46.32 Aligned_cols=133 Identities=11% Similarity=0.121 Sum_probs=81.6
Q ss_pred eEEEEEcCCC--ceeeeecC------CCCCeEEEEECc--CCC-EEEEEE-ccCCCeEEEEeCC--Cc---eeEEeC---
Q 020756 63 KLNYLTTDGT--HEGLVPLR------KEGPVHDVQWSY--SGS-EFAVVY-GFMPASATIFNKK--CR---PILELG--- 122 (321)
Q Consensus 63 ~l~~l~~~g~--~~~~v~l~------~~~~v~~~~wsP--~g~-~l~~~~-g~~~~~i~i~d~~--~~---~~~~~~--- 122 (321)
.|+.++.+.. ....+.+. .....+.+...+ +|. +|+++. +.....+.+|+++ +. .+.++.
T Consensus 84 ~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~ 163 (355)
T 3sre_A 84 KILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL 163 (355)
T ss_dssp EEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTT
T ss_pred eEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCC
Confidence 4788887632 22222221 123677888766 465 455542 3234578888763 22 223342
Q ss_pred CcCeeeEEEcCCCCeEEEEcc--C------------CCCCcEEEEECCCCeEEEeeeC-CCeeeEEEccCCCEEEEEEcC
Q 020756 123 SGPYNTVRWNPKGKFLCLAGF--G------------NLPGDMAFWDYVDGKQLGTTRA-ECSVTSEWSPDGRYFMTATTA 187 (321)
Q Consensus 123 ~~~~~~~~~sPdG~~l~~~g~--~------------n~~g~i~iwD~~~~~~i~~~~~-~~~~~~~wSpdG~~l~t~~s~ 187 (321)
-...|.+...|+|++.+.... . ...|.|+.+|...-+.+ ... .....++|||||++|..+.+
T Consensus 164 ~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~--~~~l~~pNGia~spDg~~lYvadt- 240 (355)
T 3sre_A 164 LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV--AEGFDFANGINISPDGKYVYIAEL- 240 (355)
T ss_dssp CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEE--EEEESSEEEEEECTTSSEEEEEEG-
T ss_pred CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEe--ecCCcccCcceECCCCCEEEEEeC-
Confidence 345789999999998887541 1 12367777776422222 222 36677999999999999887
Q ss_pred CceeecCcEEEEeec
Q 020756 188 PRLQIDNGIKIFHHN 202 (321)
Q Consensus 188 ~rl~~d~~v~iw~~~ 202 (321)
..+.|..|+++
T Consensus 241 ----~~~~I~~~~~~ 251 (355)
T 3sre_A 241 ----LAHKIHVYEKH 251 (355)
T ss_dssp ----GGTEEEEEEEC
T ss_pred ----CCCeEEEEEEC
Confidence 47788999985
No 272
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.80 E-value=0.00029 Score=65.05 Aligned_cols=128 Identities=14% Similarity=0.103 Sum_probs=53.3
Q ss_pred eEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEeCC--c-Ce-eeEEEcCCCCe
Q 020756 63 KLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILELGS--G-PY-NTVRWNPKGKF 137 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~--~-~~-~~~~~sPdG~~ 137 (321)
.|+.++...+. ....+.. +++.+..+..+|..+++ +..++.+..||.+ ++.+..+.. . .+ .+.... ++..
T Consensus 20 ~v~a~d~~tG~-~~W~~~~-~~~~s~p~~~~g~~~v~--~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~ 94 (369)
T 2hz6_A 20 SLHAVSKRTGS-IKWTLKE-DPVLQVPTHVEEPAFLP--DPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGI 94 (369)
T ss_dssp EEEEEETTTCC-EEEEEEC-CCSCCCC-----CCEEE--CTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------
T ss_pred EEEEEECCCCC-EEEEecC-CCceecceEcCCCEEEE--eCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCE
Confidence 36666654332 2222222 44444445566765555 4678899999984 444444411 1 11 111111 3445
Q ss_pred EEEEccCCCCCcEEEEECCCCeEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCcee
Q 020756 138 LCLAGFGNLPGDMAFWDYVDGKQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLF 206 (321)
Q Consensus 138 l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l 206 (321)
|++++ .++.|+.||.++|+.+-.+..+. ...++|++..|++++. ++.++.||. +|+.+
T Consensus 95 v~~g~---~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~------dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 95 LYMGK---KQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRT------EYTITMYDTKTRELR 153 (369)
T ss_dssp CCCCE---EEEEEEEECCC------------------------EEEEEE------EEEEECCCSSSSSCC
T ss_pred EEEEe---CCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEec------CCEEEEEECCCCCEE
Confidence 55555 67899999999998876665543 2356778888888873 778888887 45544
No 273
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.76 E-value=0.068 Score=48.85 Aligned_cols=142 Identities=11% Similarity=0.124 Sum_probs=81.4
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec----CCCCCeEEEEECcC---CCEEEEEEc
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL----RKEGPVHDVQWSYS---GSEFAVVYG 102 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l----~~~~~v~~~~wsP~---g~~l~~~~g 102 (321)
.-..|.|.|+|+ |++.. ..+ .|+.++.+|. +....+ ..++...+++++|+ +..|.+++.
T Consensus 30 ~P~~ia~~pdG~-l~V~e-----~~g-------~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 30 VPWSIAPLGGGR-YLVTE-----RPG-------RLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp CEEEEEEEETTE-EEEEE-----TTT-------EEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCeEEEEcCCCe-EEEEe-----CCC-------EEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 456889999997 44431 112 3566655553 222211 12456899999998 666766543
Q ss_pred c--CC----CeEEEEeCCCc--------eeEE-eC---CcCeeeEEEcCCCCeEEEEccC----------CCCCcEEEEE
Q 020756 103 F--MP----ASATIFNKKCR--------PILE-LG---SGPYNTVRWNPKGKFLCLAGFG----------NLPGDMAFWD 154 (321)
Q Consensus 103 ~--~~----~~i~i~d~~~~--------~~~~-~~---~~~~~~~~~sPdG~~l~~~g~~----------n~~g~i~iwD 154 (321)
. .+ ..|..|+.... .+.. +. ...-+.+.|.|||.+.++.|.. +..|.|..+|
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~ 175 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVD 175 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEEC
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEc
Confidence 2 12 46777776432 1111 21 2234679999999877765421 1236777777
Q ss_pred CCCC---------eEEEeeeCCCeeeEEEcc-CCCEEEEEE
Q 020756 155 YVDG---------KQLGTTRAECSVTSEWSP-DGRYFMTAT 185 (321)
Q Consensus 155 ~~~~---------~~i~~~~~~~~~~~~wSp-dG~~l~t~~ 185 (321)
.+.. ..+...-..+...++|+| +|+++++-.
T Consensus 176 ~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 176 EEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEec
Confidence 6532 122222223677899999 677665544
No 274
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.72 E-value=0.29 Score=48.30 Aligned_cols=158 Identities=9% Similarity=-0.016 Sum_probs=102.3
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecC-CCCCeEEEEECcCCCEEEEEEccCCCeE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLR-KEGPVHDVQWSYSGSEFAVVYGFMPASA 108 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~-~~~~v~~~~wsP~g~~l~~~~g~~~~~i 108 (321)
....+.|++.+..|++. |. ....|+.+..+|.......+. .-.....+++++.+..|.++. ...+.|
T Consensus 41 ~~~~ld~~~~~~~ly~s---D~--------~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d-~~~~~I 108 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWS---DV--------SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTD-SETNRI 108 (619)
T ss_dssp CEEEEEEETTTTEEEEE---ET--------TTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEE-TTTTEE
T ss_pred ceEEEEEEeCCCEEEEE---EC--------CCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEe-CCCCEE
Confidence 35577888887777664 11 223467777777532121122 225678999999888887763 446799
Q ss_pred EEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCe--EEEeeeCCCeeeEEEccCCCEEEE
Q 020756 109 TIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK--QLGTTRAECSVTSEWSPDGRYFMT 183 (321)
Q Consensus 109 ~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpdG~~l~t 183 (321)
.+.++++.....+ .-..-+.|++.|.+.+|..+..++ .+.|+..+++... .+..........+++++++..|..
T Consensus 109 ~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~-~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~ 187 (619)
T 3s94_A 109 EVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE-VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYW 187 (619)
T ss_dssp EEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred EEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCC-CCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEE
Confidence 9999988765554 233456899999888888877442 4688888886432 222222236778999998888887
Q ss_pred EEcCCceeecCcEEEEeecCce
Q 020756 184 ATTAPRLQIDNGIKIFHHNGSL 205 (321)
Q Consensus 184 ~~s~~rl~~d~~v~iw~~~g~~ 205 (321)
+-. ..+.|...+++|..
T Consensus 188 aD~-----~~~~I~~~~~dG~~ 204 (619)
T 3s94_A 188 ADA-----KLNFIHKSNLDGTN 204 (619)
T ss_dssp EET-----TTCCEEEESSSCCE
T ss_pred EeC-----CCCeEEEecCCCCc
Confidence 775 36778888887753
No 275
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.63 E-value=0.28 Score=48.91 Aligned_cols=72 Identities=11% Similarity=0.148 Sum_probs=49.2
Q ss_pred CCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEeccC---ceEEEEEec
Q 020756 147 PGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKKMFD---KLFQAEWKP 221 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~~~~---~~~~~~w~P 221 (321)
+|.|..||+.+++.+-.+..+ ......++..|.++++++ .|+.|+.||. +|+++.+.... .-.-+.|..
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt------~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~ 527 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGS------ADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSV 527 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEEC------CCCcEEEEECCCCccceeeeCCCCcccCceEEEE
Confidence 377999999999887766554 233346777888888876 4999999997 68888544322 112345555
Q ss_pred CCC
Q 020756 222 VSP 224 (321)
Q Consensus 222 ~~~ 224 (321)
++.
T Consensus 528 ~G~ 530 (689)
T 1yiq_A 528 DGE 530 (689)
T ss_dssp TTE
T ss_pred CCE
Confidence 554
No 276
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.59 E-value=0.048 Score=49.76 Aligned_cols=142 Identities=13% Similarity=0.181 Sum_probs=81.2
Q ss_pred CeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc--eeEEe-----CCcCeeeEEEcCC---CCeEEEEccCCCC---CcE
Q 020756 84 PVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR--PILEL-----GSGPYNTVRWNPK---GKFLCLAGFGNLP---GDM 150 (321)
Q Consensus 84 ~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~--~~~~~-----~~~~~~~~~~sPd---G~~l~~~g~~n~~---g~i 150 (321)
.-.+++|.|+|+.+++ .+.+.|.+++ .+. .+..+ +......++|+|+ +..|.++...+.+ ..|
T Consensus 32 ~P~~ia~~pdG~l~V~---e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA---ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CEEEEEECTTSCEEEE---ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CceEEEEcCCCeEEEE---eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4568999999985544 4458999998 443 22222 2456788999999 6666555421111 578
Q ss_pred EEEECCCC-----eE-EEeee-----CCCeeeEEEccCCCEEEEEEcCCce-------eecCcEEEEeecCc--------
Q 020756 151 AFWDYVDG-----KQ-LGTTR-----AECSVTSEWSPDGRYFMTATTAPRL-------QIDNGIKIFHHNGS-------- 204 (321)
Q Consensus 151 ~iwD~~~~-----~~-i~~~~-----~~~~~~~~wSpdG~~l~t~~s~~rl-------~~d~~v~iw~~~g~-------- 204 (321)
..++.... +. +..+. .|....+.|+|||.++++.+..-.. ...+.|.-++.+|.
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 88887643 12 22233 1355679999999766664421000 01134555555552
Q ss_pred -------eeEEeccCceEEEEEecCCCCCCCC
Q 020756 205 -------LFFKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 205 -------~l~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.++.......+.++|.|+...+|..
T Consensus 188 ~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~ 219 (352)
T 2ism_A 188 GRRGARPEVYSLGHRNPQGLAWHPKTGELFSS 219 (352)
T ss_dssp TCTTSCTTEEEECCSEECCCEECTTTCCEEEE
T ss_pred CCCCCCccEEEEcCCCcccEEEECCCCCEEEE
Confidence 1233333445667888855556643
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.51 E-value=0.42 Score=42.76 Aligned_cols=136 Identities=6% Similarity=-0.123 Sum_probs=84.9
Q ss_pred eeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeE
Q 020756 62 SKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFL 138 (321)
Q Consensus 62 ~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l 138 (321)
..|..++.+|.....+.........+++.+|.+..|.+........|..+++++.....+ .-..-+.++|+|+++.|
T Consensus 101 ~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~l 180 (318)
T 3sov_A 101 NRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKL 180 (318)
T ss_dssp TEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred CEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEE
Confidence 357777777764333322333456899999987777776422346899999987665555 22345889999999888
Q ss_pred EEEccCCCCCcEEEEECCCC--eEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCcee
Q 020756 139 CLAGFGNLPGDMAFWDYVDG--KQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLF 206 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~--~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l 206 (321)
..+.. ..+.|+.+|++.. +.+..........++.. +..|..+.. ..+.|..++. +|+.+
T Consensus 181 Y~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~-----~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 181 YWADA--KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDW-----STHSILACNKYTGEGL 242 (318)
T ss_dssp EEEET--TTTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEET-----TTTEEEEEETTTCCSC
T ss_pred EEEEC--CCCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEec-----CCCeEEEEECCCCCce
Confidence 88874 3478999998643 22221111244556654 334444442 3667777776 56544
No 278
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.51 E-value=0.27 Score=42.99 Aligned_cols=137 Identities=12% Similarity=0.116 Sum_probs=84.1
Q ss_pred CCceeecc--eeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe--CCcCeeeE
Q 020756 54 TNQSYYGE--SKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL--GSGPYNTV 129 (321)
Q Consensus 54 t~~s~~g~--~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~~ 129 (321)
.+..|.+. ..|+.++..+.......+ ....+.++...++|..++. . +.+..||..+..+..+ +...+.++
T Consensus 147 ~g~l~vgt~~~~l~~~d~~g~~~~~~~~-~~~~~~~~~~d~~g~l~v~---t--~~l~~~d~~g~~~~~~~~~~~~~~~~ 220 (330)
T 3hxj_A 147 DGTIYVGSNDNYLYAINPDGTEKWRFKT-NDAITSAASIGKDGTIYFG---S--DKVYAINPDGTEKWNFYAGYWTVTRP 220 (330)
T ss_dssp TSCEEEECTTSEEEEECTTSCEEEEEEC-SSCCCSCCEECTTCCEEEE---S--SSEEEECTTSCEEEEECCSSCCCSCC
T ss_pred CCEEEEEcCCCEEEEECCCCCEeEEEec-CCCceeeeEEcCCCEEEEE---e--CEEEEECCCCcEEEEEccCCcceece
Confidence 34444433 457777776432223332 2345667777778874443 3 6788999655555555 34567888
Q ss_pred EEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC--CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCceeE
Q 020756 130 RWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE--CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLFF 207 (321)
Q Consensus 130 ~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~--~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l~ 207 (321)
...++|.+.+.+ .++.|..+|. +++.+..+... ....+...++|+ |..++. ++++..+|.+|+.+.
T Consensus 221 ~~~~~g~l~v~t----~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~------~ggl~~~d~~g~~~~ 288 (330)
T 3hxj_A 221 AISEDGTIYVTS----LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSY------DGHLYAINPDGTEKW 288 (330)
T ss_dssp EECTTSCEEEEE----TTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECT------TCEEEEECTTSCEEE
T ss_pred EECCCCeEEEEc----CCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecC------CCCEEEECCCCcEEE
Confidence 899988665544 4578888885 55555444433 234456666776 445552 678999988777664
Q ss_pred E
Q 020756 208 K 208 (321)
Q Consensus 208 ~ 208 (321)
.
T Consensus 289 ~ 289 (330)
T 3hxj_A 289 N 289 (330)
T ss_dssp E
T ss_pred E
Confidence 3
No 279
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.49 E-value=0.3 Score=44.29 Aligned_cols=151 Identities=12% Similarity=0.095 Sum_probs=94.1
Q ss_pred eEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC-------CCCeEEEEE---CcCCCEEEEEEc
Q 020756 33 QLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK-------EGPVHDVQW---SYSGSEFAVVYG 102 (321)
Q Consensus 33 ~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~-------~~~v~~~~w---sP~g~~l~~~~g 102 (321)
.+.|.+....+++.. .|.| .|+.++..++....+.+.. ...+..+.| .|+|+.++++..
T Consensus 17 ~~~wd~~~g~~~vs~---------l~~g--~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSN---------LYKG--RIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp CEEEETTTTEEEEEE---------TTTT--EEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred CccCcCCCCEEEEEe---------ccCC--EEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 458988777776642 1222 3666666644333333322 113579999 799777776431
Q ss_pred -----------cCCCeEEEEeCC----CceeEEeC-----C----------cCeeeEEEcCCCCeEEEEccCCCCCcEEE
Q 020756 103 -----------FMPASATIFNKK----CRPILELG-----S----------GPYNTVRWNPKGKFLCLAGFGNLPGDMAF 152 (321)
Q Consensus 103 -----------~~~~~i~i~d~~----~~~~~~~~-----~----------~~~~~~~~sPdG~~l~~~g~~n~~g~i~i 152 (321)
..+..+..||+. ++.+.... . ...+.+...++|+.-++.+++. +.|..
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~--~~I~r 163 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM--PAIAR 163 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS--CEEEE
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC--CeEEE
Confidence 024678899988 55544331 1 2488999999999988887431 67777
Q ss_pred EECCCCeEEEee-eCC------CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 153 WDYVDGKQLGTT-RAE------CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 153 wD~~~~~~i~~~-~~~------~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
+|.+........ ... ..+.++++|||..|+...+ .+.+..+|+.
T Consensus 164 V~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~------~g~L~~fD~~ 214 (334)
T 2p9w_A 164 VSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG------PRALTAFDVS 214 (334)
T ss_dssp ECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS------SSSEEEEECS
T ss_pred EeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC------CCeEEEEcCC
Confidence 777533222111 111 3557999999999999885 5666666754
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.42 E-value=0.98 Score=45.85 Aligned_cols=136 Identities=10% Similarity=-0.087 Sum_probs=86.4
Q ss_pred eeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC---CcCeeeEEEcCCCCeE
Q 020756 62 SKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG---SGPYNTVRWNPKGKFL 138 (321)
Q Consensus 62 ~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~---~~~~~~~~~sPdG~~l 138 (321)
..|+.++.+|.....+.........+++.+|.+..|.+..-.....|...++.+..+..+. -..-+.|++.|.+..|
T Consensus 493 ~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~L 572 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRL 572 (791)
T ss_dssp TEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEE
T ss_pred CeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeE
Confidence 3577778877644433323344578999999877777764333368999999887776662 3457789999988888
Q ss_pred EEEccCCCCCcEEEEECCCCeEEEeeeC----CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEe-ecCcee
Q 020756 139 CLAGFGNLPGDMAFWDYVDGKQLGTTRA----ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFH-HNGSLF 206 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~~i~~~~~----~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~-~~g~~l 206 (321)
..+..+ ...|+.+|++.......... .....++. ++.+|..+.. ..+.|...+ ++|..+
T Consensus 573 YwaD~~--~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~-----~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 573 YWVDSK--LHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDI-----INEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEETT--TTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEET-----TTTEEEEEETTTCCCC
T ss_pred EEEeCC--CCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEEC-----CCCEEEEEeCCCCcce
Confidence 888643 37899999965433222222 13344554 4556666653 255666666 355433
No 281
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.40 E-value=0.15 Score=46.38 Aligned_cols=142 Identities=11% Similarity=0.170 Sum_probs=80.7
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeec----CCCCCeEEEEECcC---CCEEEEEEc
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPL----RKEGPVHDVQWSYS---GSEFAVVYG 102 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l----~~~~~v~~~~wsP~---g~~l~~~~g 102 (321)
.-..|.|.|+|+ |++. + ..+ .|+.++ ++..+....+ ......+.++|+|+ +..|.+++.
T Consensus 32 ~P~~ia~~pdG~-l~V~---e--~~g-------~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIA---E--RPG-------RIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEEECTTSC-EEEE---E--TTT-------EEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCCe-EEEE---e--CCC-------eEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 456899999998 4443 1 112 366666 4432222111 23457889999998 667777643
Q ss_pred cC-C---CeEEEEeCCCc------eeEE-eC--C---cCeeeEEEcCCCCeEEEEccC----------CCCCcEEEEECC
Q 020756 103 FM-P---ASATIFNKKCR------PILE-LG--S---GPYNTVRWNPKGKFLCLAGFG----------NLPGDMAFWDYV 156 (321)
Q Consensus 103 ~~-~---~~i~i~d~~~~------~~~~-~~--~---~~~~~~~~sPdG~~l~~~g~~----------n~~g~i~iwD~~ 156 (321)
.. + ..|..|+.... .+.+ +. . ...+.+.|.|||.+.++.+.. +..|.|.-+|.+
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~d 177 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPE 177 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTT
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCC
Confidence 21 1 46777876532 1222 32 1 234689999999766665421 123677777765
Q ss_pred C--------------CeEEEeeeCCCeeeEEEcc-CCCEEEEEE
Q 020756 157 D--------------GKQLGTTRAECSVTSEWSP-DGRYFMTAT 185 (321)
Q Consensus 157 ~--------------~~~i~~~~~~~~~~~~wSp-dG~~l~t~~ 185 (321)
. ...+......+...++|+| +|+++++-.
T Consensus 178 G~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 178 GEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp SSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEE
T ss_pred CCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEc
Confidence 3 1111111122566799999 677666544
No 282
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.34 E-value=0.11 Score=47.26 Aligned_cols=144 Identities=10% Similarity=0.115 Sum_probs=80.5
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeee------cCCCCCeEEEEECcC---CCEEEEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVP------LRKEGPVHDVQWSYS---GSEFAVV 100 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~------l~~~~~v~~~~wsP~---g~~l~~~ 100 (321)
.-..|.|.|+|+.|++.. .. | .|+.++.++.....+. ...++...+++|+|+ +..|.++
T Consensus 19 ~P~~i~~~pdG~~l~V~e-----~~-----G--~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITL-----RG-----G--ELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SEEEEEECSTTCCEEEEE-----TT-----T--EEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CcEEEEEcCCCCEEEEEe-----CC-----c--eEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 457899999999655531 11 2 3677766553221111 122456789999996 6666665
Q ss_pred EccC------CCeEEEEeCCCc-----e---eEE-eC-----CcCeeeEEEcCCCCeEEEEccC----------CCCCcE
Q 020756 101 YGFM------PASATIFNKKCR-----P---ILE-LG-----SGPYNTVRWNPKGKFLCLAGFG----------NLPGDM 150 (321)
Q Consensus 101 ~g~~------~~~i~i~d~~~~-----~---~~~-~~-----~~~~~~~~~sPdG~~l~~~g~~----------n~~g~i 150 (321)
+... ...|..|++... . +.+ +. ...-+.+.|.|||.+.++.|.. +..|.|
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEE
Confidence 4321 225666665321 1 111 11 1124579999999766665421 124678
Q ss_pred EEEECCCC--------------eEEEeeeCCCeeeEEEcc-CCCEEEEEE
Q 020756 151 AFWDYVDG--------------KQLGTTRAECSVTSEWSP-DGRYFMTAT 185 (321)
Q Consensus 151 ~iwD~~~~--------------~~i~~~~~~~~~~~~wSp-dG~~l~t~~ 185 (321)
.-+|.+.. ..+...-..+...++|+| +|+++++-.
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEec
Confidence 88887532 112222222677799999 677665544
No 283
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.31 E-value=0.33 Score=44.29 Aligned_cols=144 Identities=10% Similarity=0.052 Sum_probs=81.3
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeee-ec-----CCCCCeEEEEECcC---CCEEEEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLV-PL-----RKEGPVHDVQWSYS---GSEFAVV 100 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v-~l-----~~~~~v~~~~wsP~---g~~l~~~ 100 (321)
.-..|.|.|+|+.++.- . ..| .|+.++..+.....+ .+ ..++...+++++|+ +..|.+.
T Consensus 33 ~P~~ia~~pdG~llVte----r-~~G-------~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSS----R-DEA-------TITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp SEEEEEECTTSCEEEEE----T-TTC-------EEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred CceEEEEcCCCcEEEEE----e-cCC-------EEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 45689999999844331 1 122 366776543222222 11 23567899999996 5566665
Q ss_pred Ec-cCCCeEEEEeCCC-----------ceeE-EeC---CcCeeeEEEcCCCCeEEEEccC----------CCCCcEEEEE
Q 020756 101 YG-FMPASATIFNKKC-----------RPIL-ELG---SGPYNTVRWNPKGKFLCLAGFG----------NLPGDMAFWD 154 (321)
Q Consensus 101 ~g-~~~~~i~i~d~~~-----------~~~~-~~~---~~~~~~~~~sPdG~~l~~~g~~----------n~~g~i~iwD 154 (321)
+. .....|.-|.+.. +.+. .+. ...-..|.|.|||.+.++.|.. +..|.|.-.|
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 43 2234566665532 1122 231 2334679999999877775521 1346777777
Q ss_pred CCCC---------eEEEeeeCCCeeeEEEccCCCEEEEEE
Q 020756 155 YVDG---------KQLGTTRAECSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 155 ~~~~---------~~i~~~~~~~~~~~~wSpdG~~l~t~~ 185 (321)
.+.. ..+...-..+...++|+|+|+++++-.
T Consensus 181 ~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 181 PDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp TTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEEC
T ss_pred CCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEec
Confidence 6522 122222222677899999998766544
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.20 E-value=0.64 Score=41.53 Aligned_cols=146 Identities=11% Similarity=0.157 Sum_probs=83.3
Q ss_pred EEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEE
Q 020756 64 LNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCL 140 (321)
Q Consensus 64 l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~ 140 (321)
||.-...|..-..+.......++++.++|++..+++ +.......-.|-.+.....+ ....+..+.++|+|++++.
T Consensus 144 v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~--g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~ 221 (327)
T 2xbg_A 144 IYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAV--SSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMI 221 (327)
T ss_dssp EEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEE--ETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEE
T ss_pred EEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEE--ECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEE
Confidence 443333344444454455668999999999887765 33322333334323333333 3456778899999987766
Q ss_pred EccCCCCCcEEEEECCCCeEEEeee-----C-CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCc-eeEEec---
Q 020756 141 AGFGNLPGDMAFWDYVDGKQLGTTR-----A-ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGS-LFFKKM--- 210 (321)
Q Consensus 141 ~g~~n~~g~i~iwD~~~~~~i~~~~-----~-~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~-~l~~~~--- 210 (321)
+ .+|.|++.+.+.++.-..+. . ..+..+.+.+++..++.+. ++.+ ++..++. .-....
T Consensus 222 ~----~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-------~g~i-~~S~DgG~tW~~~~~~~ 289 (327)
T 2xbg_A 222 V----NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-------AGAL-LCSQDGGQTWQQDVDVK 289 (327)
T ss_dssp E----TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-------TTCE-EEESSTTSSCEECGGGT
T ss_pred e----CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-------CCeE-EEeCCCCcccEEcCccC
Confidence 5 45777776543343322222 1 2467788999988777665 5555 3444433 222211
Q ss_pred --cCceEEEEEecCC
Q 020756 211 --FDKLFQAEWKPVS 223 (321)
Q Consensus 211 --~~~~~~~~w~P~~ 223 (321)
...++.+.|.++.
T Consensus 290 ~~~~~~~~v~~~~~~ 304 (327)
T 2xbg_A 290 KVPSNFYKILFFSPD 304 (327)
T ss_dssp TSSSCCCEEEEEETT
T ss_pred CCCCCeEEEEEECCC
Confidence 2467888886443
No 285
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.18 E-value=0.23 Score=46.97 Aligned_cols=144 Identities=10% Similarity=0.142 Sum_probs=82.0
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcC-CCceeeeecC-------CCCCeEEEEECcC---CCEEE
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTD-GTHEGLVPLR-------KEGPVHDVQWSYS---GSEFA 98 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~-g~~~~~v~l~-------~~~~v~~~~wsP~---g~~l~ 98 (321)
....|.|.|+|+.++.- +.+ ..|+.++.. +.......+. -++...+++|+|+ +..|.
T Consensus 28 ~P~~~a~~pdG~l~V~e------~~g------g~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lY 95 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTE------RAT------GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIY 95 (454)
T ss_dssp SEEEEEECTTSCEEEEE------TTT------CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEE
T ss_pred CceEEEEcCCCcEEEEE------cCC------CEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEE
Confidence 45689999999844431 111 136777653 4333222222 2466789999997 67777
Q ss_pred EEEccC-----------CCeEEEEeCCC--------ceeEE-eC---CcCeeeEEEcCCCCeEEEEccC-C---------
Q 020756 99 VVYGFM-----------PASATIFNKKC--------RPILE-LG---SGPYNTVRWNPKGKFLCLAGFG-N--------- 145 (321)
Q Consensus 99 ~~~g~~-----------~~~i~i~d~~~--------~~~~~-~~---~~~~~~~~~sPdG~~l~~~g~~-n--------- 145 (321)
+++... ...|.-|+... +.+.+ +. ....+.+.|.|||.+.++.|.. +
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccc
Confidence 765320 12455555421 12222 31 2346789999999977776532 1
Q ss_pred -------------------CCCcEEEEECCCC------------eEEEeeeCCCeeeEEEccCCCEEEEEE
Q 020756 146 -------------------LPGDMAFWDYVDG------------KQLGTTRAECSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 146 -------------------~~g~i~iwD~~~~------------~~i~~~~~~~~~~~~wSpdG~~l~t~~ 185 (321)
..|.|.-+|.+.. ..+...-..+...++|+|+|+++++-.
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~ 246 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQ 246 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEEE
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEec
Confidence 1356666666432 012222122677899999998776655
No 286
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.17 E-value=0.37 Score=47.96 Aligned_cols=77 Identities=13% Similarity=0.274 Sum_probs=55.6
Q ss_pred CeEEEEeCCC-ceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC---CeeeEEEccCCCE
Q 020756 106 ASATIFNKKC-RPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE---CSVTSEWSPDGRY 180 (321)
Q Consensus 106 ~~i~i~d~~~-~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~---~~~~~~wSpdG~~ 180 (321)
+.|..||+.+ +.+-.+ ...+.....++++|..|++++ .++.|++||.++++.+..+... ...-+.|++||+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~---~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~ 533 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGT---ADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ 533 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC---TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEEC---CCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEE
Confidence 5788899864 444444 233445556777888888876 8899999999999999888754 3345788899986
Q ss_pred EEEEE
Q 020756 181 FMTAT 185 (321)
Q Consensus 181 l~t~~ 185 (321)
++...
T Consensus 534 ~v~~~ 538 (677)
T 1kb0_A 534 YVSVA 538 (677)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 65543
No 287
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.15 E-value=0.73 Score=41.71 Aligned_cols=121 Identities=12% Similarity=0.158 Sum_probs=80.4
Q ss_pred ceEEe---CCCCCeeEEEEEe--cccCCCceeecceeEEEEEcC----CCceeeeecC------------CCCCeEEEEE
Q 020756 32 VQLNW---NRGSTGLLAVAQS--DVDKTNQSYYGESKLNYLTTD----GTHEGLVPLR------------KEGPVHDVQW 90 (321)
Q Consensus 32 ~~~~W---sp~G~~l~~~~~~--d~d~t~~s~~g~~~l~~l~~~----g~~~~~v~l~------------~~~~v~~~~w 90 (321)
..+.| -++|+.+++ +.. +.+..|..+.|...|+.++.. +.....+.|. ......+++.
T Consensus 66 sGl~~~~~D~~grL~vv-~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 66 SGLSLLTHDNSKRLFAV-MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEESSSSSCCEEEEE-EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eEEEEeccCCCCcEEEE-EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 57899 588555554 332 234445545566678888877 4333333332 1135889999
Q ss_pred CcCCCEEEEEEccCC-CeEEEEeCCCceeEEe--CC------cCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC
Q 020756 91 SYSGSEFAVVYGFMP-ASATIFNKKCRPILEL--GS------GPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG 158 (321)
Q Consensus 91 sP~g~~l~~~~g~~~-~~i~i~d~~~~~~~~~--~~------~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~ 158 (321)
.++|+..++- ... +.|..++.++..+..+ .. ...+-|.++|+|+.|++.. ..|.|.-+|+.+.
T Consensus 145 D~~GnaYVt~--s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~~g~L~~fD~~~p 216 (334)
T 2p9w_A 145 DRDGNSYVAF--ALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG---GPRALTAFDVSKP 216 (334)
T ss_dssp CTTSCEEEEE--EESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES---SSSSEEEEECSSS
T ss_pred CCCCCEEEeC--CCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEc---CCCeEEEEcCCCC
Confidence 9999977763 334 6788888877644433 11 2356899999999999988 4789999998743
No 288
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.02 E-value=0.84 Score=45.03 Aligned_cols=138 Identities=9% Similarity=-0.055 Sum_probs=90.3
Q ss_pred eEEEEEcCCCceeeeecC------CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcC
Q 020756 63 KLNYLTTDGTHEGLVPLR------KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNP 133 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~------~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sP 133 (321)
.|+.+..+|.....+... ..+...++++...++.|.++. ...+.|.+.++++.....+ ....-..|+..|
T Consensus 363 ~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td-~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp 441 (628)
T 4a0p_A 363 MIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTC-EATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNP 441 (628)
T ss_dssp EEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEE-TTTTEEEEEETTSCEEEEEEECTTCCEEEEEEET
T ss_pred eEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEc-CCCCEEEEEECCCCeEEEEEeCCCCceeeEEEec
Confidence 467777777543333222 234678999999988887763 4456899999988765554 345677899999
Q ss_pred CCCeEEEEccCCCCCcEEEEECCCCeEEEeee--CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee
Q 020756 134 KGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR--AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF 206 (321)
Q Consensus 134 dG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~--~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l 206 (321)
...+|..+..++..+.|+..+++......... -.....++.++++..|..+-+ ..+.|...+++|...
T Consensus 442 ~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~-----~~~~I~~~~~dG~~r 511 (628)
T 4a0p_A 442 EKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS-----DLRRIESSDLSGANR 511 (628)
T ss_dssp TTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSC
T ss_pred CCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeC-----CCCEEEEEeCCCCce
Confidence 66677666533322268888886332222222 236778999999888887775 256788888877543
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.00 E-value=1.1 Score=44.17 Aligned_cols=136 Identities=7% Similarity=0.002 Sum_probs=89.6
Q ss_pred eEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEE
Q 020756 63 KLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLC 139 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~ 139 (321)
.|+.+..+|.....+....-+....+++.+.+..|.++. ...+.|.+.++++.....+ .-..-+.+++.|...+|.
T Consensus 372 ~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD-~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly 450 (619)
T 3s94_A 372 AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTD-TGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMY 450 (619)
T ss_dssp EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE-TTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEE
T ss_pred eEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEe-CCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEE
Confidence 477777777533333222234567889988777777763 4456899999987765555 234567899999866777
Q ss_pred EEccCCCCCcEEEEECCCCeEEEeee--CCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCce
Q 020756 140 LAGFGNLPGDMAFWDYVDGKQLGTTR--AECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSL 205 (321)
Q Consensus 140 ~~g~~n~~g~i~iwD~~~~~~i~~~~--~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~ 205 (321)
.+..++ .+.|+..+++......... -.....++.++++..|..+-+ ..+.|..++++|..
T Consensus 451 ~tD~g~-~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~-----~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 451 WTDWGE-IPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDA-----KTDKIEVMNTDGTG 512 (619)
T ss_dssp EEECSS-SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEESSSCC
T ss_pred EecCCC-CCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEEC-----CCCEEEEEecCCCc
Confidence 776432 4678888875332222122 236778999998888887775 25667778887653
No 290
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.95 E-value=0.12 Score=47.13 Aligned_cols=143 Identities=8% Similarity=0.036 Sum_probs=80.4
Q ss_pred CeEEEEECcCCC-EEEEEEccCCCeEEEEeCCCcee---EEe------CCcCeeeEEEcCC---CCeEEEEccCC-C---
Q 020756 84 PVHDVQWSYSGS-EFAVVYGFMPASATIFNKKCRPI---LEL------GSGPYNTVRWNPK---GKFLCLAGFGN-L--- 146 (321)
Q Consensus 84 ~v~~~~wsP~g~-~l~~~~g~~~~~i~i~d~~~~~~---~~~------~~~~~~~~~~sPd---G~~l~~~g~~n-~--- 146 (321)
.-..++|.|+|+ .+++ .+.++|.+++..+... ..+ +......++++|+ +..|.++.... .
T Consensus 19 ~P~~i~~~pdG~~l~V~---e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT---LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTTCCEEEE---ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCCCEEEEE---eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 346899999999 5544 4568999998654321 111 2345678999996 55555542110 1
Q ss_pred -CCcEEEEECCCC-------eEE-Eeee-----CCCeeeEEEccCCCEEEEEEcCCc-------eeecCcEEEEeecCc-
Q 020756 147 -PGDMAFWDYVDG-------KQL-GTTR-----AECSVTSEWSPDGRYFMTATTAPR-------LQIDNGIKIFHHNGS- 204 (321)
Q Consensus 147 -~g~i~iwD~~~~-------~~i-~~~~-----~~~~~~~~wSpdG~~l~t~~s~~r-------l~~d~~v~iw~~~g~- 204 (321)
...|..|++... +.+ ..+. .|....+.|+|||.++++.+..-. ....+.|.-++.+|.
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235777776532 111 1121 234567999999966665542100 001134555555664
Q ss_pred --------------eeEEeccCceEEEEEecCCCCCCCC
Q 020756 205 --------------LFFKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 205 --------------~l~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.++.......+.++|.|....+|..
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 1244444567889999955556543
No 291
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.84 E-value=0.6 Score=46.51 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=54.8
Q ss_pred CeEEEEeCCC-ceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC---CeeeEEEccCCCE
Q 020756 106 ASATIFNKKC-RPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE---CSVTSEWSPDGRY 180 (321)
Q Consensus 106 ~~i~i~d~~~-~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~---~~~~~~wSpdG~~ 180 (321)
+.+..||+.+ +.+-.+ ...+.....++..|.+|++++ .++.|+.||.++|+.+-.+... ...-+.|+.||+.
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt---~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGS---ADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC---TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEEC---CCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEE
Confidence 5688899964 444444 233344446677888888887 8999999999999999877654 2345788999986
Q ss_pred EEEEE
Q 020756 181 FMTAT 185 (321)
Q Consensus 181 l~t~~ 185 (321)
++...
T Consensus 532 yv~~~ 536 (689)
T 1yiq_A 532 YVTFM 536 (689)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 292
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.54 E-value=0.58 Score=42.67 Aligned_cols=143 Identities=10% Similarity=0.091 Sum_probs=81.8
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCce---eEEe------CCcCeeeEEEcCC---CCeEEEE-ccCCCCCc
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRP---ILEL------GSGPYNTVRWNPK---GKFLCLA-GFGNLPGD 149 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~---~~~~------~~~~~~~~~~sPd---G~~l~~~-g~~n~~g~ 149 (321)
..-..++|.|||+.|++. ...++|.+++..... +..+ +......++++|+ ...|.++ .. .....
T Consensus 32 ~~P~~ia~~pdG~llVte--r~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~-~~~~~ 108 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSS--RDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS-ASDNR 108 (347)
T ss_dssp SSEEEEEECTTSCEEEEE--TTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC-SSSEE
T ss_pred CCceEEEEcCCCcEEEEE--ecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec-CCCCE
Confidence 345689999999876662 336789999764322 2222 3456778999996 3444432 11 12346
Q ss_pred EEEEECCC----------CeEE-Eeee---CCCeeeEEEccCCCEEEEEEcCCc------e-eecCcEEEEeecCc----
Q 020756 150 MAFWDYVD----------GKQL-GTTR---AECSVTSEWSPDGRYFMTATTAPR------L-QIDNGIKIFHHNGS---- 204 (321)
Q Consensus 150 i~iwD~~~----------~~~i-~~~~---~~~~~~~~wSpdG~~l~t~~s~~r------l-~~d~~v~iw~~~g~---- 204 (321)
|.-|.+.. .+.+ ..+. .|....+.|+|||.++++.++.-. + ...+.|.-.+.+|.
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 66676543 1222 2222 356667999999987777552100 0 01233444455554
Q ss_pred ------eeEEeccCceEEEEEecCCCCCCCC
Q 020756 205 ------LFFKKMFDKLFQAEWKPVSPDKFGD 229 (321)
Q Consensus 205 ------~l~~~~~~~~~~~~w~P~~~~~~~~ 229 (321)
.++.........++|.|+ ..++..
T Consensus 189 nPf~~~~i~a~G~RNp~Gla~dp~-G~L~~~ 218 (347)
T 3das_A 189 NPFPGSPVYSYGHRNVQGLAWDDK-QRLFAS 218 (347)
T ss_dssp CSSTTCCEEEBCCSBCCEEEECTT-CCEEEE
T ss_pred CCCCCCeEEeeCCCCcceEEECCC-CCEEEE
Confidence 244444456678899996 455543
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.48 E-value=0.12 Score=49.67 Aligned_cols=136 Identities=8% Similarity=0.034 Sum_probs=87.0
Q ss_pred CeEEEEECc-CCCEEEEEEccCCCeEEEEeCCCceeEEe-CC-----cCeeeEEE-------cCCCCeEEEEccCCC---
Q 020756 84 PVHDVQWSY-SGSEFAVVYGFMPASATIFNKKCRPILEL-GS-----GPYNTVRW-------NPKGKFLCLAGFGNL--- 146 (321)
Q Consensus 84 ~v~~~~wsP-~g~~l~~~~g~~~~~i~i~d~~~~~~~~~-~~-----~~~~~~~~-------sPdG~~l~~~g~~n~--- 146 (321)
....++++| +...|.++... ...|.++|++.+.+..+ .. .....++| +++|++|+++...+.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~-~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDG-HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEET-EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECC-CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 356899999 46667776432 35799999988877776 22 13678999 999998887763321
Q ss_pred -CCcEEEEECCC-Ce--------EEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec--------Cce---
Q 020756 147 -PGDMAFWDYVD-GK--------QLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN--------GSL--- 205 (321)
Q Consensus 147 -~g~i~iwD~~~-~~--------~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~--------g~~--- 205 (321)
...|.+++... +. .+..+ .....++.+|++.+|..+.. .++.|..+|+. +.+
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~--~~p~giavdp~~g~LYvtd~-----~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY--KQCNGATIHPINGELYFNSY-----EKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE--SCCCCEEECTTTCCEEEEET-----TTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred cCceEEEEecCCCCceeecccceeeccC--CCceEEEEcCCCCeEEEEEC-----CCCEEEEEecccccccccCceeecc
Confidence 12477777544 11 22222 24456788997666666664 36668899886 322
Q ss_pred -----------eEEe-ccCceEEEEEecCCCCCC
Q 020756 206 -----------FFKK-MFDKLFQAEWKPVSPDKF 227 (321)
Q Consensus 206 -----------l~~~-~~~~~~~~~w~P~~~~~~ 227 (321)
++.. .....+.++|+|+...+|
T Consensus 292 ~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lY 325 (496)
T 3kya_A 292 IVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAY 325 (496)
T ss_dssp BGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred cccccccccceeEecCCCCCceEEEEcCCCCEEE
Confidence 1111 123467899999987544
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.41 E-value=0.075 Score=53.25 Aligned_cols=136 Identities=10% Similarity=-0.072 Sum_probs=79.2
Q ss_pred eeEEEEEcCCCceeeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC---CcCeeeEEEcCCCCeE
Q 020756 62 SKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG---SGPYNTVRWNPKGKFL 138 (321)
Q Consensus 62 ~~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~---~~~~~~~~~sPdG~~l 138 (321)
..|+.++.++.....+.........+++++|.+..|++......+.|..+++.+.....+. -..-+.|+|+|++..|
T Consensus 475 ~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~L 554 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRL 554 (699)
T ss_dssp SCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCE
T ss_pred CeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEE
Confidence 4577777776533322111223457889999877666642112257888888776554442 2345789999998888
Q ss_pred EEEccCCCCCcEEEEECCCCe--EEEeeeC--CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCcee
Q 020756 139 CLAGFGNLPGDMAFWDYVDGK--QLGTTRA--ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLF 206 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~~~--~i~~~~~--~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l 206 (321)
.++.. ..+.|+.+|++... .+..... .....+++.. .+|+.+.. ..+.|..++. +|+.+
T Consensus 555 Y~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~-----~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 555 YWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDI-----INEAIFSANRLTGSDV 618 (699)
T ss_dssp EEEET--TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECS-----TTTCEEEEETTTEEEE
T ss_pred EEEec--CCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeC-----CCCeEEEEEccCCCce
Confidence 77763 34789999986432 2221111 1334455543 34444442 3567887775 45544
No 295
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.40 E-value=1.5 Score=39.75 Aligned_cols=183 Identities=9% Similarity=0.125 Sum_probs=109.6
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee--eeecC--
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG--LVPLR-- 80 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~--~v~l~-- 80 (321)
..++||++.. .+.+....+ ..+.+-.+|=.+.+.-++ .++.+|.|+..+.... .....
T Consensus 87 ~~LQiFnlet---K~klks~~~-~e~VvfWkWis~~~L~lV--------------T~taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 87 KTLQIFNIEM---KSKMKAHTM-TDDVTFWKWISLNTVALV--------------TDNAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp TEEEEEETTT---TEEEEEEEC-SSCEEEEEECSSSEEEEE--------------ESSEEEEEESSTTCCCEEEEECCGG
T ss_pred CeEEEechHH---hhhhcceec-CCccEEEEecCCCeEEEE--------------cCCcEEEEcccCCCCCceeeecchh
Confidence 4678888887 566666554 457777777665444333 2334788888764322 22221
Q ss_pred -CCCCeEEEEECcCCCEEEEEE-----ccCCCeEEEEeCCCceeEEeCCcCeeeEEEcCCCC-----eEEEEccCCCCCc
Q 020756 81 -KEGPVHDVQWSYSGSEFAVVY-----GFMPASATIFNKKCRPILELGSGPYNTVRWNPKGK-----FLCLAGFGNLPGD 149 (321)
Q Consensus 81 -~~~~v~~~~wsP~g~~l~~~~-----g~~~~~i~i~d~~~~~~~~~~~~~~~~~~~sPdG~-----~l~~~g~~n~~g~ 149 (321)
..-.|....-+++.+.++++. +...|.+.||+.+.+.-+.+.........+-.+|+ +++++.-....+.
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 145788889999999888762 12336788999977655555322223344544444 4555532112368
Q ss_pred EEEEECCCC--------eEEEe-eeCC-----CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEecc
Q 020756 150 MAFWDYVDG--------KQLGT-TRAE-----CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKKMF 211 (321)
Q Consensus 150 i~iwD~~~~--------~~i~~-~~~~-----~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~~~ 211 (321)
+.|.++... ++... +..+ -...+..|+.-..+..-+. -+-+++||+ +|.+++....
T Consensus 229 LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK------~G~ihlyDleTgt~i~~nrI 299 (365)
T 2xzh_A 229 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK------YGYIHLYDLETGTCIYMNRI 299 (365)
T ss_dssp EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEET------TSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeC------CcEEEEEEcccCcEEEEecc
Confidence 888887432 11111 1111 3455778887777777773 678999998 6777766544
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.40 E-value=0.94 Score=40.40 Aligned_cols=103 Identities=10% Similarity=0.086 Sum_probs=60.0
Q ss_pred eeeecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-CceeEEeC------CcCeeeEEEcCCCCeEEEEccCCCC
Q 020756 75 GLVPLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-CRPILELG------SGPYNTVRWNPKGKFLCLAGFGNLP 147 (321)
Q Consensus 75 ~~v~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~~~~~~~~------~~~~~~~~~sPdG~~l~~~g~~n~~ 147 (321)
..+.......++++.++++++.+++ ..++.+.+.+.+ +.....+. ...+..+.|.|++.+++++. +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~~~~~---~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~----~ 269 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGRLWMI---VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG----A 269 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSCEEEE---ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES----T
T ss_pred eECCCCCCCccceeEECCCCCEEEE---eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC----C
Confidence 3444445567899999999976655 235666665433 33222221 12467889999888777654 4
Q ss_pred CcEEEEECCCCe---EEEeee--CCCeeeEEEccCCCEEEEEE
Q 020756 148 GDMAFWDYVDGK---QLGTTR--AECSVTSEWSPDGRYFMTAT 185 (321)
Q Consensus 148 g~i~iwD~~~~~---~i~~~~--~~~~~~~~wSpdG~~l~t~~ 185 (321)
+.| ++..+.++ .+.... ......+.|.++++.++.+.
T Consensus 270 g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 270 GAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp TCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECS
T ss_pred CeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcC
Confidence 666 34454443 332211 12566788887777555544
No 297
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.97 E-value=3.2 Score=41.06 Aligned_cols=57 Identities=16% Similarity=0.231 Sum_probs=41.2
Q ss_pred CCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe
Q 020756 147 PGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK 209 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~ 209 (321)
+|.|.-||+.+++.+=..... ......+...|.++++++ .|+.++.||. +|+.+.+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~------~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGT------AAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEEC------CcccchhhhhhcChhheEe
Confidence 378999999999877555443 333345666788888876 4899999997 57777443
No 298
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.93 E-value=1.1 Score=41.95 Aligned_cols=69 Identities=13% Similarity=0.222 Sum_probs=50.5
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCC-C----------c--eeEEe--C------CcCeeeEEEcCC---CCeE
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKK-C----------R--PILEL--G------SGPYNTVRWNPK---GKFL 138 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~-~----------~--~~~~~--~------~~~~~~~~~sPd---G~~l 138 (321)
+.|+.+..||+|++||++ | +..+.|..+- . . ..+.+ + ..++..+.|||- |..|
T Consensus 66 ~~i~qlvlSpsG~lLAl~-g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~L 142 (452)
T 3pbp_A 66 DDTFHVISSTSGDLLCLF-N--DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCI 142 (452)
T ss_dssp CTTCEEEECTTSSEEEEE-C--SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEE
T ss_pred CceeEEEECCCCCEEEEe-c--CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeE
Confidence 367889999999999996 4 4578887662 1 0 11222 2 456899999995 4577
Q ss_pred EEEccCCCCCcEEEEECCC
Q 020756 139 CLAGFGNLPGDMAFWDYVD 157 (321)
Q Consensus 139 ~~~g~~n~~g~i~iwD~~~ 157 (321)
++-. .|+.|++||+..
T Consensus 143 VVLt---sD~~Ir~yDl~~ 158 (452)
T 3pbp_A 143 VVLK---EDDTITMFDILN 158 (452)
T ss_dssp EEEE---TTSCEEEEETTC
T ss_pred EEEe---cCCEEEEEEccc
Confidence 7766 789999999985
No 299
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.82 E-value=1.2 Score=43.22 Aligned_cols=78 Identities=17% Similarity=0.144 Sum_probs=49.4
Q ss_pred CCeEEEEeCC-CceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC---CeeeEEEccCCC
Q 020756 105 PASATIFNKK-CRPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE---CSVTSEWSPDGR 179 (321)
Q Consensus 105 ~~~i~i~d~~-~~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~---~~~~~~wSpdG~ 179 (321)
.+.+..||.. ++.+-++ .............|..|++++ .++.|+.||.++++.+-.+... ....+.+..||+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~---~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~ 519 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYAT---LDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGK 519 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC---TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEc---CCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCE
Confidence 3578888885 4444444 122222222334567777776 7899999999999998877654 223355677887
Q ss_pred EEEEEE
Q 020756 180 YFMTAT 185 (321)
Q Consensus 180 ~l~t~~ 185 (321)
.++...
T Consensus 520 ~yv~~~ 525 (571)
T 2ad6_A 520 QYIGSM 525 (571)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 665554
No 300
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.82 E-value=2.7 Score=39.60 Aligned_cols=183 Identities=9% Similarity=0.129 Sum_probs=110.1
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCcee--eeecC--
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEG--LVPLR-- 80 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~--~v~l~-- 80 (321)
..++||++.. .+.+....+ ..+++-.+|=.+...-++ .++.+|.|+.+|.... .....
T Consensus 86 ~~lQiFnle~---K~klks~~~-~e~VvfWkWis~~~l~lV--------------T~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 86 KTLQIFNIEM---KSKMKAHTM-TDDVTFWKWISLNTVALV--------------TDNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp TEEEEEETTT---TEEEEEEEC-SSCCCEEEEEETTEEEEE--------------CSSEEEEEESSSSCCCEEEEECCGG
T ss_pred CeEEEEchHH---hhhhcceec-CCCceEEEecCCCeEEEE--------------cCCeeEEecccCCCCchhheecchh
Confidence 4678888887 556655554 457777777655333333 2345888888774222 22221
Q ss_pred -CCCCeEEEEECcCCCEEEEEE-----ccCCCeEEEEeCCCceeEEeCCcCeeeEEEcCCCC-----eEEEEccCCCCCc
Q 020756 81 -KEGPVHDVQWSYSGSEFAVVY-----GFMPASATIFNKKCRPILELGSGPYNTVRWNPKGK-----FLCLAGFGNLPGD 149 (321)
Q Consensus 81 -~~~~v~~~~wsP~g~~l~~~~-----g~~~~~i~i~d~~~~~~~~~~~~~~~~~~~sPdG~-----~l~~~g~~n~~g~ 149 (321)
..-.|....-+++.+.++++. +...|.+.||+.+.+.-+.+.........+-.+|+ .++++.-....+.
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 227 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCE
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 245788899999999988762 12346788999976655555222223344544443 4555542223478
Q ss_pred EEEEECCCC--------eEEEeee-CC-----CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEecc
Q 020756 150 MAFWDYVDG--------KQLGTTR-AE-----CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKKMF 211 (321)
Q Consensus 150 i~iwD~~~~--------~~i~~~~-~~-----~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~~~ 211 (321)
+.|.++... ++...+. .+ -...+..|+.-..+..-+. -+-+++||+ +|.+++....
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK------~G~i~lyDleTgt~i~~nrI 298 (494)
T 1bpo_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK------YGYIHLYDLETGTCIYMNRI 298 (494)
T ss_dssp EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET------TSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEec------CceEEEEecccceeeeeecc
Confidence 999988532 1211111 11 3455788888777777773 677999998 6777766544
No 301
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.66 E-value=0.93 Score=42.77 Aligned_cols=100 Identities=11% Similarity=0.146 Sum_probs=59.9
Q ss_pred CeEEEEECcCCCEEEEEEccCCC-eEEEEeCC-Cc--eeEEeC--------CcCeeeEEEcCC---CCeEEEEccC----
Q 020756 84 PVHDVQWSYSGSEFAVVYGFMPA-SATIFNKK-CR--PILELG--------SGPYNTVRWNPK---GKFLCLAGFG---- 144 (321)
Q Consensus 84 ~v~~~~wsP~g~~l~~~~g~~~~-~i~i~d~~-~~--~~~~~~--------~~~~~~~~~sPd---G~~l~~~g~~---- 144 (321)
....++|.|+|+.+++ .+.+ +|.+++.. +. .+..+. ......++|+|+ +..|.++...
T Consensus 28 ~P~~~a~~pdG~l~V~---e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 28 KPHALLWGPDNQIWLT---ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SEEEEEECTTSCEEEE---ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CceEEEEcCCCcEEEE---EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 4468999999986666 3444 78888753 22 233332 244568999996 5555554311
Q ss_pred --CC----CCcEEEEECCCC-------eEEE-eee---CCCeeeEEEccCCCEEEEEEc
Q 020756 145 --NL----PGDMAFWDYVDG-------KQLG-TTR---AECSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 145 --n~----~g~i~iwD~~~~-------~~i~-~~~---~~~~~~~~wSpdG~~l~t~~s 186 (321)
.. ...|.-+++... +.+. .+. .|....+.|+|||.++++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 00 235666665432 1121 122 256778999999998887654
No 302
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.54 E-value=0.36 Score=45.33 Aligned_cols=95 Identities=14% Similarity=0.174 Sum_probs=59.3
Q ss_pred ccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcC-CC---ce---------eeeecC-----CCCCeEEEEEC
Q 020756 30 STVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTD-GT---HE---------GLVPLR-----KEGPVHDVQWS 91 (321)
Q Consensus 30 ~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~-g~---~~---------~~v~l~-----~~~~v~~~~ws 91 (321)
+..++.-||+|++|+++ |..++..+.+- +. .+ ....++ ...+|..+.|+
T Consensus 67 ~i~qlvlSpsG~lLAl~-------------g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWH 133 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLF-------------NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFH 133 (452)
T ss_dssp TTCEEEECTTSSEEEEE-------------CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEEC
T ss_pred ceeEEEECCCCCEEEEe-------------cCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEec
Confidence 56789999999999997 44445555443 11 00 011221 35789999999
Q ss_pred cC---CCEEEEEEccCCCeEEEEeCCC---ceeEEeC-----------CcCeeeEEEcCCCCeEEE
Q 020756 92 YS---GSEFAVVYGFMPASATIFNKKC---RPILELG-----------SGPYNTVRWNPKGKFLCL 140 (321)
Q Consensus 92 P~---g~~l~~~~g~~~~~i~i~d~~~---~~~~~~~-----------~~~~~~~~~sPdG~~l~~ 140 (321)
|- |..|++. ..++.|++||+.. .+. .+. ...+.+++|..+|=.|.+
T Consensus 134 Pl~~~ds~LVVL--tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 134 PKSYRDSCIVVL--KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp TTBGGGCEEEEE--ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred cccCCCCeEEEE--ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 94 5578876 5578999999953 233 331 134556777776544443
No 303
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.40 E-value=4.6 Score=40.42 Aligned_cols=136 Identities=11% Similarity=0.138 Sum_probs=84.0
Q ss_pred cCCCceeecce--eEEEEEcCCCceeeeecC--------CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe
Q 020756 52 DKTNQSYYGES--KLNYLTTDGTHEGLVPLR--------KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL 121 (321)
Q Consensus 52 d~t~~s~~g~~--~l~~l~~~g~~~~~v~l~--------~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~ 121 (321)
|..|..+.|.. .|+.++.....-..+... ....|.++...++|+.|-+ |..++-+.+||.+...+..+
T Consensus 365 d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi--gt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 365 DKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI--GTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp CTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE--EETTTEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE--EeCcCceeEEeCCCCcEEEe
Confidence 45566666542 577776554322222211 1356889998888883333 24445789999876655554
Q ss_pred C-------CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee--------CCCeeeEEEccCCCEEEEEEc
Q 020756 122 G-------SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR--------AECSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 122 ~-------~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~--------~~~~~~~~wSpdG~~l~t~~s 186 (321)
. ...+.++...++|++.+.+. +.|.+||..+++...... ...+.++..+++|+..+ ++
T Consensus 443 ~~~~~~l~~~~v~~i~~d~~g~lwigt~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt- 515 (795)
T 4a2l_A 443 NQRNSQLVNENVYAILPDGEGNLWLGTL-----SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWI-GG- 515 (795)
T ss_dssp CTTTSCCSCSCEEEEEECSSSCEEEEES-----SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEE-EE-
T ss_pred ecCCCCcCCCeeEEEEECCCCCEEEEec-----CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEE-Ee-
Confidence 2 35678888888888666543 458999998775443221 13577888899998544 44
Q ss_pred CCceeecCcEEEEeec
Q 020756 187 APRLQIDNGIKIFHHN 202 (321)
Q Consensus 187 ~~rl~~d~~v~iw~~~ 202 (321)
.+++.+|+..
T Consensus 516 ------~~Gl~~~~~~ 525 (795)
T 4a2l_A 516 ------EEGLSVFKQE 525 (795)
T ss_dssp ------SSCEEEEEEE
T ss_pred ------CCceEEEeCC
Confidence 2455566553
No 304
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.68 E-value=5.4 Score=38.58 Aligned_cols=57 Identities=19% Similarity=0.262 Sum_probs=38.2
Q ss_pred CCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe
Q 020756 147 PGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK 209 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~ 209 (321)
.+.|..||+.+++.+-.+... .+........|..+.+++ .|+.|+.||. +|+++.+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~------~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYAT------LDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEc------CCCeEEEEECCCCCEEEEE
Confidence 478999999999877665443 222223344556666665 3899999997 67777444
No 305
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.39 E-value=0.66 Score=45.75 Aligned_cols=115 Identities=9% Similarity=0.087 Sum_probs=69.6
Q ss_pred EEEEECc-CCCEEEEEEccCC----------CeEEEEeCCCceeE---Ee---CCcCeeeEEEcCCCCeEEEEccCCCCC
Q 020756 86 HDVQWSY-SGSEFAVVYGFMP----------ASATIFNKKCRPIL---EL---GSGPYNTVRWNPKGKFLCLAGFGNLPG 148 (321)
Q Consensus 86 ~~~~wsP-~g~~l~~~~g~~~----------~~i~i~d~~~~~~~---~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g 148 (321)
+.+++.| +|+ |+++.|... ..+.+||...+.+. .+ .......+.+.++|++++++|.. +.
T Consensus 189 ~~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~--~~ 265 (656)
T 1k3i_A 189 AAAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND--AK 265 (656)
T ss_dssp SEEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS--TT
T ss_pred eeEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC--CC
Confidence 3566777 555 444433211 15788998655433 23 22334457888999999999843 35
Q ss_pred cEEEEECCCCeEEE--eeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 149 DMAFWDYVDGKQLG--TTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 149 ~i~iwD~~~~~~i~--~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
.+++||..+.+-.. .+... .-..+...+||+.++.++..-....-+.+.+||...
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 89999988764332 22222 223456778999999988321111236788888743
No 306
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.16 E-value=5.8 Score=37.42 Aligned_cols=144 Identities=13% Similarity=0.135 Sum_probs=79.7
Q ss_pred ccceEEeCCCCC-eeEEEEEecccCCCceeecceeEEEEEcCCCc--eeeeecC----------CCCCeEEEEECcC---
Q 020756 30 STVQLNWNRGST-GLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH--EGLVPLR----------KEGPVHDVQWSYS--- 93 (321)
Q Consensus 30 ~~~~~~Wsp~G~-~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~--~~~v~l~----------~~~~v~~~~wsP~--- 93 (321)
.-..|.|.|+|+ .|+|.. +.| .|+.++.++.. .....+. -++...+++++|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~e-----r~G-------~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~ 82 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILE-----KEG-------YVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKK 82 (463)
T ss_dssp SEEEEECCSSSSCCEEEEE-----TTT-------EEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHH
T ss_pred CceEEEECCCCCeEEEEEe-----CCc-------eEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcC
Confidence 456899999997 566642 222 26666655432 1111111 1467889999996
Q ss_pred CCEEEEEEccC-C----------CeEEEEeCCC-----------ceeEEe----CCcCeeeEEEcCCCCeEEEEccCC--
Q 020756 94 GSEFAVVYGFM-P----------ASATIFNKKC-----------RPILEL----GSGPYNTVRWNPKGKFLCLAGFGN-- 145 (321)
Q Consensus 94 g~~l~~~~g~~-~----------~~i~i~d~~~-----------~~~~~~----~~~~~~~~~~sPdG~~l~~~g~~n-- 145 (321)
...|.+.+... + ..|.-|.+.. +.+.++ .......|.|.|||.+.++.|.+.
T Consensus 83 n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~ 162 (463)
T 2wg3_C 83 NGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMIT 162 (463)
T ss_dssp HCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCC
T ss_pred CCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCC
Confidence 44555554321 1 1344454421 133333 234467899999998877766421
Q ss_pred ------------CCCcEEEEECCCC---------------------eEEEeeeCCCeeeEEEccC-----CCEEEEEE
Q 020756 146 ------------LPGDMAFWDYVDG---------------------KQLGTTRAECSVTSEWSPD-----GRYFMTAT 185 (321)
Q Consensus 146 ------------~~g~i~iwD~~~~---------------------~~i~~~~~~~~~~~~wSpd-----G~~l~t~~ 185 (321)
..|.|.-.|.+.. ..|...-.-+...++|.|. |++.+.++
T Consensus 163 ~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~ 240 (463)
T 2wg3_C 163 LDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCS 240 (463)
T ss_dssp HHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEE
T ss_pred CCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEec
Confidence 2456666676541 0122222226677999997 56544444
No 307
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.08 E-value=1.5 Score=42.58 Aligned_cols=119 Identities=13% Similarity=0.240 Sum_probs=77.8
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-------ce-------eEE--eCCcCeeeEEEcCCCCeEEEEccCCC
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-------RP-------ILE--LGSGPYNTVRWNPKGKFLCLAGFGNL 146 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-------~~-------~~~--~~~~~~~~~~~sPdG~~l~~~g~~n~ 146 (321)
...|.+..+|||+++++. |-.+.++.++|.+. +. +.. ++.++. ...|.++| ...++-| .
T Consensus 323 ksPHGv~vsPDGkyi~v~-GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPl-Ht~Fd~~G-~aYTtlf--i 397 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAA-GKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPL-HTTFDGRG-NAYTTLF--I 397 (638)
T ss_dssp SSCCCEEECTTSCEEEEE-CTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEE-EEEECSSS-EEEEEET--T
T ss_pred CCCcceeeCCCCCEEEEc-CCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCccc-EEEECCCC-ceEeeee--e
Confidence 345789999999999887 66677999999742 11 111 133333 56799999 4445443 6
Q ss_pred CCcEEEEECCCC----------eEEEeeeCC-CeeeEEE------ccCCCEEEEEEcCCceee-------cCcEEEEeec
Q 020756 147 PGDMAFWDYVDG----------KQLGTTRAE-CSVTSEW------SPDGRYFMTATTAPRLQI-------DNGIKIFHHN 202 (321)
Q Consensus 147 ~g~i~iwD~~~~----------~~i~~~~~~-~~~~~~w------SpdG~~l~t~~s~~rl~~-------d~~v~iw~~~ 202 (321)
|.+|.-|++... ..+..+.-| .+-.+.- .|||+||++..-.-.-|. -..-+|.|++
T Consensus 398 dSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIs 477 (638)
T 3sbq_A 398 DSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDIS 477 (638)
T ss_dssp TTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECS
T ss_pred cceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecC
Confidence 789999998752 345555544 3333433 689999999875332111 2356899998
Q ss_pred Ccee
Q 020756 203 GSLF 206 (321)
Q Consensus 203 g~~l 206 (321)
|..+
T Consensus 478 GdkM 481 (638)
T 3sbq_A 478 GDEM 481 (638)
T ss_dssp SSSC
T ss_pred CCce
Confidence 8744
No 308
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.89 E-value=2.2 Score=41.93 Aligned_cols=96 Identities=5% Similarity=0.012 Sum_probs=59.8
Q ss_pred eEEEEEcCCCceeee---ecCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC---CcC-eeeEEEcCCC
Q 020756 63 KLNYLTTDGTHEGLV---PLRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG---SGP-YNTVRWNPKG 135 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v---~l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~---~~~-~~~~~~sPdG 135 (321)
.++.++.....-..+ ...+....+.+++.++|+.+++- |..+..+.+||...+....+. ... ..++...|+|
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~G-G~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg 298 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTG-GNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG 298 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEEC-SSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeC-CCCCCceEEecCcCCceeECCCCCccccccceEEecCC
Confidence 455665544322222 11233445567888888766552 445568999999877666652 222 2346677899
Q ss_pred CeEEEEccCC---CCCcEEEEECCCCe
Q 020756 136 KFLCLAGFGN---LPGDMAFWDYVDGK 159 (321)
Q Consensus 136 ~~l~~~g~~n---~~g~i~iwD~~~~~ 159 (321)
++++++|..+ ...++++||..+.+
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred eEEEEeCcccCCcccccceEeCCCCCc
Confidence 9999998422 23679999998764
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.56 E-value=6 Score=35.98 Aligned_cols=121 Identities=13% Similarity=0.136 Sum_probs=72.8
Q ss_pred ceeEEEEEcCCCceeee-ecC--CCCCeEEEEECcCCCEEEEEEc-c--------------CCCeEEEEeCCCceeEEe-
Q 020756 61 ESKLNYLTTDGTHEGLV-PLR--KEGPVHDVQWSYSGSEFAVVYG-F--------------MPASATIFNKKCRPILEL- 121 (321)
Q Consensus 61 ~~~l~~l~~~g~~~~~v-~l~--~~~~v~~~~wsP~g~~l~~~~g-~--------------~~~~i~i~d~~~~~~~~~- 121 (321)
...|+.++..+.....+ .+. .-...+|+...++|+.++.-.. . ..+.+.-||.. .+..+
T Consensus 140 ~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~ 217 (355)
T 3sre_A 140 TVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVA 217 (355)
T ss_dssp EEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEE
T ss_pred eEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEee
Confidence 34577777765533322 222 2346789999999986554210 0 11345555553 23322
Q ss_pred -CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCC-CeE--EEeeeCC-CeeeEEEcc-CCCEEEEEE
Q 020756 122 -GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVD-GKQ--LGTTRAE-CSVTSEWSP-DGRYFMTAT 185 (321)
Q Consensus 122 -~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~-~~~--i~~~~~~-~~~~~~wSp-dG~~l~t~~ 185 (321)
+-..-|.++|||||++|.++.. ..+.|+.||++. ++. ...+... ..-.++..+ +|++.+++.
T Consensus 218 ~~l~~pNGia~spDg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 218 EGFDFANGINISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred cCCcccCcceECCCCCEEEEEeC--CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 3456789999999999988763 347899999863 322 2223222 344588888 598777665
No 310
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.90 E-value=9.1 Score=37.70 Aligned_cols=75 Identities=12% Similarity=0.195 Sum_probs=50.8
Q ss_pred CeEEEEeCCCc-eeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC---CeeeEEEccCCCE
Q 020756 106 ASATIFNKKCR-PILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE---CSVTSEWSPDGRY 180 (321)
Q Consensus 106 ~~i~i~d~~~~-~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~---~~~~~~wSpdG~~ 180 (321)
+.|..||+.+. .+-++ ...+.........|.+|++++ .++.|+.||.++++.+-.+... ...-+.+..+|+.
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~---~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGT---AAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC---TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEEC---CcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence 57888998543 33333 223333445556788888886 8899999999999988877654 2234667788884
Q ss_pred EEE
Q 020756 181 FMT 183 (321)
Q Consensus 181 l~t 183 (321)
.++
T Consensus 515 yva 517 (668)
T 1kv9_A 515 YVA 517 (668)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 311
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.79 E-value=7.1 Score=38.93 Aligned_cols=138 Identities=10% Similarity=0.073 Sum_probs=83.6
Q ss_pred cCCCceeecc--eeEEEEEcCCCceeeee---cCCCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEeC----
Q 020756 52 DKTNQSYYGE--SKLNYLTTDGTHEGLVP---LRKEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILELG---- 122 (321)
Q Consensus 52 d~t~~s~~g~--~~l~~l~~~g~~~~~v~---l~~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~~---- 122 (321)
|..|..|.|. ..|+.++........+. -.....|.++...++|...+. ...+.+..||.+...+..+.
T Consensus 371 d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig---t~~~Gl~~~~~~~~~~~~~~~~~~ 447 (781)
T 3v9f_A 371 DGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFG---TYLGNISYYNTRLKKFQIIELEKN 447 (781)
T ss_dssp CTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEE---ETTEEEEEECSSSCEEEECCSTTT
T ss_pred cCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEE---eccCCEEEEcCCCCcEEEeccCCC
Confidence 4556666654 35777665432111111 012356888888888876553 33456888888766555542
Q ss_pred -CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEee--e-----CCCeeeEEEccCCCEEEEEEcCCceeecC
Q 020756 123 -SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTT--R-----AECSVTSEWSPDGRYFMTATTAPRLQIDN 194 (321)
Q Consensus 123 -~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~--~-----~~~~~~~~wSpdG~~l~t~~s~~rl~~d~ 194 (321)
...+.++...++|++.+.+ . +.|.+||..+++..... . ...+.++...++|+..+ ++. ++
T Consensus 448 ~~~~v~~i~~d~~g~lwigt----~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~------~~ 515 (781)
T 3v9f_A 448 ELLDVRVFYEDKNKKIWIGT----H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTF------GG 515 (781)
T ss_dssp CCCCEEEEEECTTSEEEEEE----T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EES------SS
T ss_pred CCCeEEEEEECCCCCEEEEE----C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEc------CC
Confidence 3567888888888755543 3 46999998776432221 1 13577888899998554 442 45
Q ss_pred cEEEEeecCc
Q 020756 195 GIKIFHHNGS 204 (321)
Q Consensus 195 ~v~iw~~~g~ 204 (321)
++..|+..+.
T Consensus 516 Gl~~~~~~~~ 525 (781)
T 3v9f_A 516 GVGIYTPDMQ 525 (781)
T ss_dssp CEEEECTTCC
T ss_pred CEEEEeCCCC
Confidence 6777765443
No 312
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.62 E-value=12 Score=37.39 Aligned_cols=108 Identities=11% Similarity=0.093 Sum_probs=71.5
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe-----------CCcCeeeEEEcCCCCeEEEEccCCCCCcE
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL-----------GSGPYNTVRWNPKGKFLCLAGFGNLPGDM 150 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~-----------~~~~~~~~~~sPdG~~l~~~g~~n~~g~i 150 (321)
...|.++...++|...+. ...+-+..||........+ ....+.++...++|++|.++. .++.|
T Consensus 356 ~~~V~~i~~d~~g~lWiG---t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt---~~~Gl 429 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIG---TNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT---HAGGL 429 (795)
T ss_dssp CSSEEEEEECTTSCEEEE---ESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE---TTTEE
T ss_pred CCeeEEEEECCCCCEEEE---ECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe---CcCce
Confidence 346889999998875543 4455688898866544443 134577888889998556665 55679
Q ss_pred EEEECCCCeEEEee------eCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 151 AFWDYVDGKQLGTT------RAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 151 ~iwD~~~~~~i~~~------~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
.+||..+++..... ....+.++...++|+.. .++ .+++.+|+...
T Consensus 430 ~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lw-igt-------~~Gl~~~~~~~ 480 (795)
T 4a2l_A 430 SILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLW-LGT-------LSALVRFNPEQ 480 (795)
T ss_dssp EEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEE-EEE-------SSCEEEEETTT
T ss_pred eEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEE-EEe-------cCceeEEeCCC
Confidence 99999877543322 12367788888888844 444 24666776543
No 313
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.88 E-value=9.7 Score=35.86 Aligned_cols=100 Identities=12% Similarity=0.138 Sum_probs=58.8
Q ss_pred eEEEEECcCCC-EEEEEEccCCCeEEEEeCCCc----eeEEeC-----------CcCeeeEEEcCC----CCeEEEEccC
Q 020756 85 VHDVQWSYSGS-EFAVVYGFMPASATIFNKKCR----PILELG-----------SGPYNTVRWNPK----GKFLCLAGFG 144 (321)
Q Consensus 85 v~~~~wsP~g~-~l~~~~g~~~~~i~i~d~~~~----~~~~~~-----------~~~~~~~~~sPd----G~~l~~~g~~ 144 (321)
-..++|.|||+ .++|. .+.+.|.+++..+. .+..+. ......|+++|+ +.+.++-...
T Consensus 16 P~~~a~~pdG~~rl~V~--er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFIL--EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp EEEEECCSSSSCCEEEE--ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred ceEEEECCCCCeEEEEE--eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 35789999996 44443 55789999976432 333331 245567999997 5444432211
Q ss_pred CC-------C--CcEEEEECCC----------CeEEEeee----CCCeeeEEEccCCCEEEEEEc
Q 020756 145 NL-------P--GDMAFWDYVD----------GKQLGTTR----AECSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 145 n~-------~--g~i~iwD~~~----------~~~i~~~~----~~~~~~~~wSpdG~~l~t~~s 186 (321)
.. + ..|.-|.+.. .+.|..+. .|....|.|.|||.++++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 00 0 1344455431 23333332 357778999999988887764
No 314
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=90.00 E-value=9.9 Score=33.74 Aligned_cols=100 Identities=12% Similarity=0.104 Sum_probs=58.5
Q ss_pred CEEEEEEccCCCeEEEEeCC-CceeEEeC-CcC--------eeeEEEcC--CCCeEEEEccCCCCCcEEEEECCCCeEEE
Q 020756 95 SEFAVVYGFMPASATIFNKK-CRPILELG-SGP--------YNTVRWNP--KGKFLCLAGFGNLPGDMAFWDYVDGKQLG 162 (321)
Q Consensus 95 ~~l~~~~g~~~~~i~i~d~~-~~~~~~~~-~~~--------~~~~~~sP--dG~~l~~~g~~n~~g~i~iwD~~~~~~i~ 162 (321)
..+++ +..++.+..+|.+ ++.+..+. ..+ +..+.-+| .+..|++++ .++.|..+|..+++.+-
T Consensus 189 ~~v~~--g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~---~~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 189 GAAVV--GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA---YNGNLTALDLRSGQIMW 263 (376)
T ss_dssp TEEEE--CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC---TTSCEEEEETTTCCEEE
T ss_pred CEEEE--EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe---cCcEEEEEECCCCcEEe
Confidence 34444 5667789999985 44443331 111 00011122 256666666 67899999999998776
Q ss_pred eeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeE
Q 020756 163 TTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFF 207 (321)
Q Consensus 163 ~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~ 207 (321)
.........+.. ++..|..++. ++.+..+|. +|+.+.
T Consensus 264 ~~~~~~~~~~~~--~~~~l~~~~~------~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 264 KRELGSVNDFIV--DGNRIYLVDQ------NDRVMALTIDGGVTLW 301 (376)
T ss_dssp EECCCCEEEEEE--ETTEEEEEET------TCCEEEEETTTCCEEE
T ss_pred eccCCCCCCceE--ECCEEEEEcC------CCeEEEEECCCCcEEE
Confidence 655444333333 4556666663 778888887 566553
No 315
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=89.28 E-value=11 Score=33.36 Aligned_cols=64 Identities=9% Similarity=-0.018 Sum_probs=37.9
Q ss_pred CEEEEEEccCCCeEEEEeCC-CceeEEeC-CcCe------eeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee
Q 020756 95 SEFAVVYGFMPASATIFNKK-CRPILELG-SGPY------NTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR 165 (321)
Q Consensus 95 ~~l~~~~g~~~~~i~i~d~~-~~~~~~~~-~~~~------~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~ 165 (321)
..+++ +..++.+..+|.+ ++.+..+. ..+. ...... +..|+++. .++.|..+|..+++.+-...
T Consensus 144 ~~v~v--~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~---~~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 144 GLVLI--HTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGG---DNGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp TEEEE--ECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECC---TTTEEEEEETTTCCEEEEEE
T ss_pred CEEEE--EcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEc---CCCEEEEEECCCCcEEEEEe
Confidence 34444 3567789999984 44444441 1111 222222 34566655 67899999999998765554
No 316
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=88.70 E-value=14 Score=33.60 Aligned_cols=126 Identities=17% Similarity=0.225 Sum_probs=78.5
Q ss_pred eEEEEEcCCCceeeeecCCCCCeEEEEECc----CCCE--EEEEEccC--CCeEEEEeC--CCceeEEeCC---------
Q 020756 63 KLNYLTTDGTHEGLVPLRKEGPVHDVQWSY----SGSE--FAVVYGFM--PASATIFNK--KCRPILELGS--------- 123 (321)
Q Consensus 63 ~l~~l~~~g~~~~~v~l~~~~~v~~~~wsP----~g~~--l~~~~g~~--~~~i~i~d~--~~~~~~~~~~--------- 123 (321)
.|+.++.+|.....++ .+.++.+..-| .|+. ++++.... ..+|.+|++ ....+..+..
T Consensus 51 gL~Vydl~G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~ 127 (355)
T 3amr_A 51 GLVVYSLDGKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAI 127 (355)
T ss_dssp EEEEEETTSCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCC
T ss_pred CEEEEcCCCcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCC
Confidence 4788888776444442 26677777666 2333 55554444 579999966 4455666632
Q ss_pred cCeeeEEE--cCC-CC-eEEEEccCCCCCcEEEEECC-------CCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCcee
Q 020756 124 GPYNTVRW--NPK-GK-FLCLAGFGNLPGDMAFWDYV-------DGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQ 191 (321)
Q Consensus 124 ~~~~~~~~--sPd-G~-~l~~~g~~n~~g~i~iwD~~-------~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~ 191 (321)
....-+++ +|. |+ ++++.+ .+|.+..|++. +.+.+.++.-. .+-.|...+...+|..+-
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~---k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~e------ 198 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTG---KEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAE------ 198 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEEC---SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEE------
T ss_pred CCeeEEEEEecCCCCcEEEEEEC---CCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEec------
Confidence 22233555 775 55 444454 66999999873 33667777665 566788888888888887
Q ss_pred ecCcEEEEe
Q 020756 192 IDNGIKIFH 200 (321)
Q Consensus 192 ~d~~v~iw~ 200 (321)
.+.+|..++
T Consensus 199 Ed~GIw~~d 207 (355)
T 3amr_A 199 EDEAIWKFS 207 (355)
T ss_dssp TTTEEEEEE
T ss_pred ccceEEEEe
Confidence 365544444
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.05 E-value=3 Score=35.54 Aligned_cols=93 Identities=10% Similarity=0.097 Sum_probs=60.7
Q ss_pred CCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC-------ceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEE
Q 020756 83 GPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC-------RPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAF 152 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~-------~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~i 152 (321)
..+.+++|+|+|...++ . .+.+.-.+... ..-..+ +-.....+.|.|+|.+.++ . +|.|+-
T Consensus 41 ~~~~~laf~P~G~LYaV-~---~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~----dG~iyr 111 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-L---NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-S----KDKLYK 111 (236)
T ss_dssp TTCSEEEECTTSCEEEE-E---TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-E----TTEEEE
T ss_pred ccceeEEECCCccEEEE-e---CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-C----CCEEEE
Confidence 36779999999997777 2 34665555422 122233 2223578999999998888 3 288988
Q ss_pred EECCC---------CeEEEeeeCCCeeeEEEccCCCEEEEE
Q 020756 153 WDYVD---------GKQLGTTRAECSVTSEWSPDGRYFMTA 184 (321)
Q Consensus 153 wD~~~---------~~~i~~~~~~~~~~~~wSpdG~~l~t~ 184 (321)
++.-+ ..+|...--..+..+.++|+|.+.+..
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 87522 123332222367889999999987766
No 318
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=87.33 E-value=3.2 Score=40.39 Aligned_cols=78 Identities=18% Similarity=0.215 Sum_probs=49.3
Q ss_pred CCeEEEEeCCC-ceeEEe-CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC-C--eeeEEEccCCC
Q 020756 105 PASATIFNKKC-RPILEL-GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE-C--SVTSEWSPDGR 179 (321)
Q Consensus 105 ~~~i~i~d~~~-~~~~~~-~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~-~--~~~~~wSpdG~ 179 (321)
.+.+..||+.. +.+-++ ...+...-.....|.+|++++ .++.|+.||.++++.+-.+... . ..-+.|..||+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~---~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGT---GDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEEC---TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEEC---CCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 35788888854 443333 122222211222467777776 8899999999999998877764 2 23377889998
Q ss_pred EEEEEE
Q 020756 180 YFMTAT 185 (321)
Q Consensus 180 ~l~t~~ 185 (321)
.++...
T Consensus 542 qYv~~~ 547 (582)
T 1flg_A 542 QYLGVT 547 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555444
No 319
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=87.27 E-value=15 Score=39.81 Aligned_cols=181 Identities=9% Similarity=0.140 Sum_probs=97.4
Q ss_pred ceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecC----
Q 020756 5 ASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLR---- 80 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~---- 80 (321)
..++||++.. .+.+....+ ..+++-.+|=...+.-+| ..+.+|.|++.|.......++
T Consensus 86 ~~lQiFnl~~---k~klks~~~-~e~VvfWkWis~~~l~lV--------------T~~aVyHW~~~~~s~P~k~fdR~~~ 147 (1630)
T 1xi4_A 86 KTLQIFNIEM---KSKMKAHTM-TDDVTFWKWISLNTVALV--------------TDNAVYHWSMEGESQPVKMFDRHSS 147 (1630)
T ss_pred CeEEEeehHH---hhhhccccc-CCCceEEEecCCCeeEEE--------------cCCeEEEeccCCCCccHHHHhcchh
Confidence 4677888877 455555554 456777777665444433 233478888876422211111
Q ss_pred -CCCCeEEEEECcCCCEEEEEE-----ccCCCeEEEEeCCCceeEEe--CCcCeeeEEE---cCCCCeEEEEccCCCCCc
Q 020756 81 -KEGPVHDVQWSYSGSEFAVVY-----GFMPASATIFNKKCRPILEL--GSGPYNTVRW---NPKGKFLCLAGFGNLPGD 149 (321)
Q Consensus 81 -~~~~v~~~~wsP~g~~l~~~~-----g~~~~~i~i~d~~~~~~~~~--~~~~~~~~~~---sPdG~~l~~~g~~n~~g~ 149 (321)
..-.|....-+++.+.++++. |...|.+.+|+.+.+.-+.+ |.+....+.. .+....++++.-....+.
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCce
Confidence 145688888899999988762 23457889998865433333 2221111111 112234444432112367
Q ss_pred EEEEECCCC--------eE-EEeeeC-----CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe
Q 020756 150 MAFWDYVDG--------KQ-LGTTRA-----ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK 209 (321)
Q Consensus 150 i~iwD~~~~--------~~-i~~~~~-----~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~ 209 (321)
+.|.++... ++ +..+.. .-...+..|+.-..+..-+ .-+-+++||+ +|.+++..
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~it------k~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT------KYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEe------cCceEEEEecccchhhhhc
Confidence 888887432 11 111111 1233466677655555555 2677899998 55555443
No 320
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=87.21 E-value=25 Score=34.91 Aligned_cols=136 Identities=10% Similarity=0.081 Sum_probs=82.3
Q ss_pred CCceeecc--eeEEEEEcCCCceeeeecC-----CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe-----
Q 020756 54 TNQSYYGE--SKLNYLTTDGTHEGLVPLR-----KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL----- 121 (321)
Q Consensus 54 t~~s~~g~--~~l~~l~~~g~~~~~v~l~-----~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~----- 121 (321)
.+..+.+. ..|+.++.....-..+... ....|.++...++|...+. ...+.+..||.....+..+
T Consensus 127 ~g~lwi~t~~~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwig---t~~~Gl~~~~~~~~~~~~~~~~~~ 203 (781)
T 3v9f_A 127 GKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIG---HVEGGLSILSLNDKSVKHFVHDPQ 203 (781)
T ss_dssp TSEEEEEESSSCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTEEEEE---ETTTEEEEEETTTTEEEEECC---
T ss_pred CCCEEEEECCCCeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCCEEEE---ecCCCeEEEcCCCCceEeeecCCC
Confidence 45555543 3577776544322233211 1245778887777765543 3344688898866544433
Q ss_pred -----CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEe---------eeCCCeeeEEEccCCCEEEEEEcC
Q 020756 122 -----GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGT---------TRAECSVTSEWSPDGRYFMTATTA 187 (321)
Q Consensus 122 -----~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~---------~~~~~~~~~~wSpdG~~l~t~~s~ 187 (321)
....+.++...++|++.+.+. . .|.+||..+++.... +....+.++...++|.+. .++.
T Consensus 204 ~~~~l~~~~i~~i~~d~~g~lwigt~----~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~- 276 (781)
T 3v9f_A 204 NPNSLPGNDVRCIYKDTNGNIWIGTS----K-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLW-IATE- 276 (781)
T ss_dssp -----CCSSEEEEEECTTCCEEEEET----T-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEE-EEES-
T ss_pred CcccCCCCceeEEEEcCCCCEEEEeC----C-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEE-EEeC-
Confidence 234688888888888776653 2 689999877654321 112357778888888854 4552
Q ss_pred CceeecCcEEEEeecCc
Q 020756 188 PRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 188 ~rl~~d~~v~iw~~~g~ 204 (321)
.+++.+++..+.
T Consensus 277 -----~~Gl~~~~~~~~ 288 (781)
T 3v9f_A 277 -----LNGIMILDLQQN 288 (781)
T ss_dssp -----SSCEEEEETTCC
T ss_pred -----CCCeEEECCCCC
Confidence 478888876543
No 321
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=85.24 E-value=8.2 Score=37.42 Aligned_cols=57 Identities=23% Similarity=0.241 Sum_probs=37.2
Q ss_pred CCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe
Q 020756 147 PGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK 209 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~ 209 (321)
.|.|.-||+.+++.+=..... ....-.....|.++..++ .|+.|+.||. +|+.+.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~------~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGT------GDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEEC------CCCcEEEEECCCCCEEEEe
Confidence 578999999999876544432 222112223456666666 3899999997 68887544
No 322
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=84.42 E-value=31 Score=33.48 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=46.2
Q ss_pred CeEEEEeCCC-ceeEEeC-CcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeCC---CeeeEEEccCCCE
Q 020756 106 ASATIFNKKC-RPILELG-SGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRAE---CSVTSEWSPDGRY 180 (321)
Q Consensus 106 ~~i~i~d~~~-~~~~~~~-~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~~---~~~~~~wSpdG~~ 180 (321)
+.+..||+.. +.+-+.. ..+...-.....|.+|++++ .++.|+.||.++++.+-.++.. ...-+.|..||+.
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt---~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGT---LDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC---TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEEC---CCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 4667777743 3333331 11111111223567777766 8899999999999998777654 2334677888875
Q ss_pred EEEEE
Q 020756 181 FMTAT 185 (321)
Q Consensus 181 l~t~~ 185 (321)
++...
T Consensus 530 yv~~~ 534 (599)
T 1w6s_A 530 YVAIY 534 (599)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44433
No 323
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=81.60 E-value=30 Score=31.28 Aligned_cols=172 Identities=15% Similarity=0.181 Sum_probs=103.2
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
|...+|.|-++.+ ...+ .+.-.++|.+-| ||....|++-+ ...|..+++... .+......
T Consensus 46 ~~~~~VvIiDl~n---~~~~-~Rrpi~AdsAIM--nP~~~ViALra-------------g~~LQiFnletK-~klks~~~ 105 (365)
T 2xzh_A 46 GEQAQVVIIDMND---PSNP-IRRPISADSAIM--NPASKVIALKA-------------GKTLQIFNIEMK-SKMKAHTM 105 (365)
T ss_dssp TTEEEEEEEETTS---TTSC-EEEECCCSEEEE--CSSSSEEEEEE-------------TTEEEEEETTTT-EEEEEEEC
T ss_pred CCCCEEEEEECCC---CCCc-cccccccceeee--CCCccEEEEec-------------CCeEEEechHHh-hhhcceec
Confidence 4456788899988 4444 334457888877 45445444421 223566666554 33333233
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC--ceeEEe--C----CcCeeeEEEcCCCCeEEEEccCC----CCCc
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC--RPILEL--G----SGPYNTVRWNPKGKFLCLAGFGN----LPGD 149 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~--~~~~~~--~----~~~~~~~~~sPdG~~l~~~g~~n----~~g~ 149 (321)
.++|.-=.|-.+ +.|+++.+ ..+.-|++.+ .++.-| | ...+-...-+++.+++++.|... ..|.
T Consensus 106 ~e~VvfWkWis~-~~L~lVT~---taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~ 181 (365)
T 2xzh_A 106 TDDVTFWKWISL-NTVALVTD---NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA 181 (365)
T ss_dssp SSCEEEEEECSS-SEEEEEES---SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEE
T ss_pred CCccEEEEecCC-CeEEEEcC---CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCcccee
Confidence 467777788533 35666633 4799999864 465555 2 33455567789999999987621 3578
Q ss_pred EEEEECCCCeEEEeeeCCCeeeEEEccCCC-----EEEEEEcCCceeecCcEEEEee
Q 020756 150 MAFWDYVDGKQLGTTRAECSVTSEWSPDGR-----YFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 150 i~iwD~~~~~~i~~~~~~~~~~~~wSpdG~-----~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
|.+|..+.+ .-..+++|...-..+-.+|. .|..+...+ ....++|-++
T Consensus 182 mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~---~g~kLhIiEi 234 (365)
T 2xzh_A 182 MQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ---AGGKLHIIEV 234 (365)
T ss_dssp EEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET---TEEEEEEEEC
T ss_pred EEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecC---CCcEEEEEEc
Confidence 999998654 44556777555556655544 455555211 1246777776
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.31 E-value=26 Score=30.25 Aligned_cols=96 Identities=8% Similarity=-0.033 Sum_probs=51.2
Q ss_pred EEEEeCCCceeEEeCCcC--e-eeEEEcCCCCeEEEEccC-----CCCCcEEEEECCCCe--EEEeeeCCCeeeEEEccC
Q 020756 108 ATIFNKKCRPILELGSGP--Y-NTVRWNPKGKFLCLAGFG-----NLPGDMAFWDYVDGK--QLGTTRAECSVTSEWSPD 177 (321)
Q Consensus 108 i~i~d~~~~~~~~~~~~~--~-~~~~~sPdG~~l~~~g~~-----n~~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpd 177 (321)
+.+||...+....+...+ + ......-++++++++|.. .....+++||..+.+ .+..+...........-+
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 148 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHM 148 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEEC
Confidence 778898877776663211 1 111111267777777742 124679999998763 333222221112233356
Q ss_pred CCEEEEEEcCCceeecCcEEEEeecC
Q 020756 178 GRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 178 G~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
++.++.++.......-+.+.+||...
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCC
Confidence 77777776422122345677777643
No 325
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.70 E-value=5.4 Score=38.95 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=41.1
Q ss_pred EEEcCCCCeEEEEccCC---------CCCcEEEEECCCCeEEEeeeCC---CeeeEEEccCCCEEEEEEc
Q 020756 129 VRWNPKGKFLCLAGFGN---------LPGDMAFWDYVDGKQLGTTRAE---CSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 129 ~~~sPdG~~l~~~g~~n---------~~g~i~iwD~~~~~~i~~~~~~---~~~~~~wSpdG~~l~t~~s 186 (321)
|.|+|+|++++...-+. ....|.+.+..+++....+..+ +++.++|+|||+.|.+..-
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 89999999777654211 1245777788777665544443 7888999999999887663
No 326
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=80.57 E-value=48 Score=32.94 Aligned_cols=185 Identities=12% Similarity=0.096 Sum_probs=88.6
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCcc----ceEEeCCCCCee---EEEEEecccCCCceeecceeEEEEEcCCCce
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCST----VQLNWNRGSTGL---LAVAQSDVDKTNQSYYGESKLNYLTTDGTHE 74 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~----~~~~Wsp~G~~l---~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~ 74 (321)
|.|..|+.|.+.+ ...-... +|.... +...-+.++++. +++.. ..+ .+ ...+|+++.+....
T Consensus 213 ~~~~~v~~~~~Gt---~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~-----~~-~~~~~~~~~~~~~~ 281 (711)
T 4hvt_A 213 LYPNSLYIWKRGE---SIEKAKK-LFEVPKEYIYVSAGKLLSDTISSSLIFISA-NKD-----FY-NYDNYILDTKYKNL 281 (711)
T ss_dssp SSBCEEEEEETTS---CGGGCEE-EEECCTTSCEEEEEESSCTTTCSSEEEEEE-ESS-----SS-CEEEEEEECSSSSC
T ss_pred CCCCEEEEEECCC---ChHHCeE-EeccCCCceEEEEEEecCCCceEEEEEEEE-ecc-----cC-ceeEEEEcCCCCCC
Confidence 5688899999876 2222222 232211 223335677752 23221 111 11 23467777653222
Q ss_pred eeeecCCCCCeEEEEECcCCCEEEEEEcc--------CCCeEEEEeCCC--------ceeEE-e-C--CcCeeeEEEcCC
Q 020756 75 GLVPLRKEGPVHDVQWSYSGSEFAVVYGF--------MPASATIFNKKC--------RPILE-L-G--SGPYNTVRWNPK 134 (321)
Q Consensus 75 ~~v~l~~~~~v~~~~wsP~g~~l~~~~g~--------~~~~i~i~d~~~--------~~~~~-~-~--~~~~~~~~~sPd 134 (321)
..+.+..... ..+.++.++..++..... ..++|.+.|+.. ..... + + ...+..+.|..+
T Consensus 282 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (711)
T 4hvt_A 282 KLQKINMPSD-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD 360 (711)
T ss_dssp EEEECCSCTT-CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred cceEeecCCc-ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence 2233322111 223456666554432111 234788888743 12333 3 2 345667888865
Q ss_pred CCeEEEEccCCCCCcEEEEECCCCe-EEEe---eeC-CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 135 GKFLCLAGFGNLPGDMAFWDYVDGK-QLGT---TRA-ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 135 G~~l~~~g~~n~~g~i~iwD~~~~~-~i~~---~~~-~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
.|++....+....|.++|+.+++ .+.. +.. ..+..+..++++..++...+.+. .-..+..+|..
T Consensus 361 --~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~--~P~~~~~~d~~ 429 (711)
T 4hvt_A 361 --RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSI--VPPTIYLWVKT 429 (711)
T ss_dssp --CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSS--SCCEEEEECTT
T ss_pred --EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCC--CCCEEEEEeCC
Confidence 34443322233468888887664 1222 222 24555667788766555443321 13345555544
No 327
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=80.48 E-value=21 Score=30.63 Aligned_cols=110 Identities=10% Similarity=0.035 Sum_probs=59.1
Q ss_pred CCEEEEEEccC-CCeEEEEeCCCceeEEeCC---cCeeeEEEcCCCCeEEEEccC-CCCCcEEEEECCCCe--EEEeeeC
Q 020756 94 GSEFAVVYGFM-PASATIFNKKCRPILELGS---GPYNTVRWNPKGKFLCLAGFG-NLPGDMAFWDYVDGK--QLGTTRA 166 (321)
Q Consensus 94 g~~l~~~~g~~-~~~i~i~d~~~~~~~~~~~---~~~~~~~~sPdG~~l~~~g~~-n~~g~i~iwD~~~~~--~i~~~~~ 166 (321)
+..|+++.|.. ...+.+||...+....+.. .........-++++++++|.. .....+++||..+.+ .+..+..
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34565554432 3478899998777776632 112222222367777777743 123689999998774 3333322
Q ss_pred CCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 167 ECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 167 ~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
.........-+++.++.++........+.+.+||...
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTT
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCC
Confidence 2111122233777777776421111235677777643
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=80.36 E-value=3.6 Score=39.95 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=48.4
Q ss_pred eEEEcCCCCeEEEEccCCCCCcEEEEECCCC------e-------EEEeeeC-CCeeeEEEccCCCEEEEEEcCCceeec
Q 020756 128 TVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG------K-------QLGTTRA-ECSVTSEWSPDGRYFMTATTAPRLQID 193 (321)
Q Consensus 128 ~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~------~-------~i~~~~~-~~~~~~~wSpdG~~l~t~~s~~rl~~d 193 (321)
.+..+|||++++.+| -+..++.++|.+.. + .+...+- ....+.+|.++| +..|..- .|
T Consensus 327 Gv~vsPDGkyi~v~G--KLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlf-----id 398 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAG--KLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLF-----ID 398 (638)
T ss_dssp CEEECTTSCEEEEEC--TTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEET-----TT
T ss_pred ceeeCCCCCEEEEcC--CCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeee-----ec
Confidence 478999999999988 35689999998742 1 1233332 267778999999 4434332 69
Q ss_pred CcEEEEeec
Q 020756 194 NGIKIFHHN 202 (321)
Q Consensus 194 ~~v~iw~~~ 202 (321)
..+.-|++.
T Consensus 399 SqvvkWni~ 407 (638)
T 3sbq_A 399 SQVVKWNME 407 (638)
T ss_dssp TEEEEEEHH
T ss_pred ceEEEEecc
Confidence 999999983
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=79.99 E-value=28 Score=29.80 Aligned_cols=97 Identities=6% Similarity=-0.061 Sum_probs=51.9
Q ss_pred CeEEEEeCCCceeEEeCC---cCeeeEEEcCCCCeEEEEccCCC------CCcEEEEECCCCe--EEEeeeCCCeeeEEE
Q 020756 106 ASATIFNKKCRPILELGS---GPYNTVRWNPKGKFLCLAGFGNL------PGDMAFWDYVDGK--QLGTTRAECSVTSEW 174 (321)
Q Consensus 106 ~~i~i~d~~~~~~~~~~~---~~~~~~~~sPdG~~l~~~g~~n~------~g~i~iwD~~~~~--~i~~~~~~~~~~~~w 174 (321)
..+.+||...+....+.. .........-++++++++|.... ...+++||..+.+ .+.............
T Consensus 118 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 197 (306)
T 3ii7_A 118 YLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLV 197 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred eeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEE
Confidence 368899998877766622 11121222236777787775322 4579999998773 333222221111122
Q ss_pred ccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 175 SPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 175 SpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
.-+++.++.++.... ..-+.+.+||...
T Consensus 198 ~~~~~i~v~GG~~~~-~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 198 FVKDKIFAVGGQNGL-GGLDNVEYYDIKL 225 (306)
T ss_dssp EETTEEEEECCEETT-EEBCCEEEEETTT
T ss_pred EECCEEEEEeCCCCC-CCCceEEEeeCCC
Confidence 226777777663211 1235677777643
No 330
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=79.98 E-value=27 Score=29.72 Aligned_cols=96 Identities=7% Similarity=0.058 Sum_probs=49.5
Q ss_pred CeEEEEeCCCceeEEeCC---cCeeeEEEcCCCCeEEEEccCCC--CCcEEEEECCCCe--EEEeeeCCCeeeEEEccCC
Q 020756 106 ASATIFNKKCRPILELGS---GPYNTVRWNPKGKFLCLAGFGNL--PGDMAFWDYVDGK--QLGTTRAECSVTSEWSPDG 178 (321)
Q Consensus 106 ~~i~i~d~~~~~~~~~~~---~~~~~~~~sPdG~~l~~~g~~n~--~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpdG 178 (321)
..+.+||...+....+.. .........-++++++++|..+. ...|++||+.+.+ .+..............-++
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 254 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRG 254 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred ceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECC
Confidence 368899998877766621 11111222226777777774322 3579999998774 3332222211112223367
Q ss_pred CEEEEEEcCCceeecCcEEEEeec
Q 020756 179 RYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 179 ~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
+.++.++.... ..-+.+.+||..
T Consensus 255 ~i~v~GG~~~~-~~~~~v~~yd~~ 277 (301)
T 2vpj_A 255 RLYAIAGYDGN-SLLSSIECYDPI 277 (301)
T ss_dssp EEEEECCBCSS-SBEEEEEEEETT
T ss_pred EEEEEcCcCCC-cccccEEEEcCC
Confidence 76666663210 011345556654
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=79.01 E-value=31 Score=29.77 Aligned_cols=96 Identities=13% Similarity=0.051 Sum_probs=50.2
Q ss_pred EEEEeCCCceeEEeCCcC--e-eeEEEcCCCCeEEEEccCC----CCCcEEEEECCCCe--EEEeeeCCCeeeEEEccCC
Q 020756 108 ATIFNKKCRPILELGSGP--Y-NTVRWNPKGKFLCLAGFGN----LPGDMAFWDYVDGK--QLGTTRAECSVTSEWSPDG 178 (321)
Q Consensus 108 i~i~d~~~~~~~~~~~~~--~-~~~~~sPdG~~l~~~g~~n----~~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpdG 178 (321)
+.+||...+....+...+ + ......-++++++++|... ....+++||..+.+ .+...............++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 159 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNG 159 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETT
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECC
Confidence 778898877777663211 1 1111122677778887431 12468999998764 3332222211112222577
Q ss_pred CEEEEEEcCCceeecCcEEEEeecC
Q 020756 179 RYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 179 ~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
+.++.++.......-+.+.+||...
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTT
T ss_pred EEEEEcCCCCCCCccceEEEEcCCC
Confidence 7777766311111235677777744
No 332
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=74.98 E-value=63 Score=31.30 Aligned_cols=57 Identities=16% Similarity=0.227 Sum_probs=36.4
Q ss_pred CCcEEEEECCCCeEEEeeeCC-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEee-cCceeEEe
Q 020756 147 PGDMAFWDYVDGKQLGTTRAE-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHH-NGSLFFKK 209 (321)
Q Consensus 147 ~g~i~iwD~~~~~~i~~~~~~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~-~g~~l~~~ 209 (321)
.|.|.-||+.+++.+=..... ....-.....|.++..++ .|+.|+.||. +|+++.+.
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt------~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGT------LDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEE
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEEC------CCCeEEEEECCCCCEEEEe
Confidence 378999999999876555322 111112233566666666 3889999997 68877544
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=73.32 E-value=70 Score=31.45 Aligned_cols=97 Identities=18% Similarity=0.216 Sum_probs=56.0
Q ss_pred eEEEEeCCCceeEEeCCc---Cee-eEEEcCCCCeEEEEccCCCCCcEEEEECCCCe--EEEe---eeCC--CeeeEEEc
Q 020756 107 SATIFNKKCRPILELGSG---PYN-TVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGK--QLGT---TRAE--CSVTSEWS 175 (321)
Q Consensus 107 ~i~i~d~~~~~~~~~~~~---~~~-~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~--~i~~---~~~~--~~~~~~wS 175 (321)
.+.+||...+.+..+... ... +...-.+|++++++|..... .+++||..+.+ .+.. .... ....+.+.
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE
T ss_pred cEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCcccceeEEEEe
Confidence 588999988777766321 111 23332488898998864433 89999998764 2322 1111 22225556
Q ss_pred cC-CCEEEEEEcCCc-eeecCcEEEEeecCc
Q 020756 176 PD-GRYFMTATTAPR-LQIDNGIKIFHHNGS 204 (321)
Q Consensus 176 pd-G~~l~t~~s~~r-l~~d~~v~iw~~~g~ 204 (321)
.+ ++.++.++.... ....+.+.+||+...
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 65 777777764211 012356888887543
No 334
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=73.21 E-value=36 Score=29.84 Aligned_cols=101 Identities=5% Similarity=-0.049 Sum_probs=50.6
Q ss_pred CeEEEEeC--CCceeEEeCCc-----CeeeEEEcCCCCeEEEEccCCC-------------------CCcEEEEECCCC-
Q 020756 106 ASATIFNK--KCRPILELGSG-----PYNTVRWNPKGKFLCLAGFGNL-------------------PGDMAFWDYVDG- 158 (321)
Q Consensus 106 ~~i~i~d~--~~~~~~~~~~~-----~~~~~~~sPdG~~l~~~g~~n~-------------------~g~i~iwD~~~~- 158 (321)
..+.+||+ ..+....+... ........-++++++++|.... -..+++||+.+.
T Consensus 217 ~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 217 DAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp CCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred CceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 35777877 55666655221 1122233346777777774211 026889998765
Q ss_pred -eEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecCcEEEEeecCcee
Q 020756 159 -KQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNGSLF 206 (321)
Q Consensus 159 -~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g~~l 206 (321)
+.+..+........+..-+++.++.++....-..-+.+.+++++++.+
T Consensus 297 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 297 WDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred eeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 455554443222233445788888888432111123455566655443
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.25 E-value=20 Score=37.04 Aligned_cols=38 Identities=11% Similarity=0.085 Sum_probs=32.7
Q ss_pred CeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee
Q 020756 125 PYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR 165 (321)
Q Consensus 125 ~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~ 165 (321)
.+.++...++..+|++.+ .|+.+++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~---~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLS---LDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEE---TTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEE---CCCEEEEEECCCCCeEeeec
Confidence 356788888999998888 99999999999999988754
No 336
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.94 E-value=20 Score=34.85 Aligned_cols=62 Identities=16% Similarity=0.192 Sum_probs=43.8
Q ss_pred eeEEEcCCCCeEEEEccC--C-------CCCcEEEEECCCCeEEEeeeCC---CeeeEEEccCCCEEEEEEcCC
Q 020756 127 NTVRWNPKGKFLCLAGFG--N-------LPGDMAFWDYVDGKQLGTTRAE---CSVTSEWSPDGRYFMTATTAP 188 (321)
Q Consensus 127 ~~~~~sPdG~~l~~~g~~--n-------~~g~i~iwD~~~~~~i~~~~~~---~~~~~~wSpdG~~l~t~~s~~ 188 (321)
+.|.|.++|.+.+..... + ....|+.+|..+++....+..+ .++.++||||+++|..+..-|
T Consensus 479 DnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred CceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCC
Confidence 468999999987754321 0 1236888888888765555443 578899999999998887433
No 337
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=67.36 E-value=59 Score=27.83 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=52.2
Q ss_pred eEEEEeCCCceeEEeC---CcCeeeEEEcCCCCeEEEEccCC---CCCcEEEEECCCCe--EEEeeeCCCeeeEEEccCC
Q 020756 107 SATIFNKKCRPILELG---SGPYNTVRWNPKGKFLCLAGFGN---LPGDMAFWDYVDGK--QLGTTRAECSVTSEWSPDG 178 (321)
Q Consensus 107 ~i~i~d~~~~~~~~~~---~~~~~~~~~sPdG~~l~~~g~~n---~~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpdG 178 (321)
.+.+||...+....+. ..........-++++++++|..+ ....+++||..+.+ .+..............-++
T Consensus 118 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 197 (315)
T 4asc_A 118 SVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDG 197 (315)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT
T ss_pred eEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECC
Confidence 6889999877776662 22222223334677788887522 13579999998763 3332222211112223377
Q ss_pred CEEEEEEcCCceeecCcEEEEeecC
Q 020756 179 RYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 179 ~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
+.++.++.... ...+.+.+||...
T Consensus 198 ~iyv~GG~~~~-~~~~~~~~yd~~~ 221 (315)
T 4asc_A 198 RIIVAAGVTDT-GLTSSAEVYSITD 221 (315)
T ss_dssp EEEEEEEECSS-SEEEEEEEEETTT
T ss_pred EEEEEeccCCC-CccceEEEEECCC
Confidence 77777774211 0123566677643
No 338
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=66.41 E-value=59 Score=27.48 Aligned_cols=97 Identities=10% Similarity=0.036 Sum_probs=52.2
Q ss_pred eEEEEeCCCce---eEEeCC---cCeeeEEEcCCCCeEEEEccCCC--CCcEEEEECCCCe--EEEeeeCCCeeeEEEcc
Q 020756 107 SATIFNKKCRP---ILELGS---GPYNTVRWNPKGKFLCLAGFGNL--PGDMAFWDYVDGK--QLGTTRAECSVTSEWSP 176 (321)
Q Consensus 107 ~i~i~d~~~~~---~~~~~~---~~~~~~~~sPdG~~l~~~g~~n~--~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSp 176 (321)
.+.+||...+. ...+.. .........-++++++++|..+. ...+++||..+.+ .+..............-
T Consensus 79 ~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 158 (301)
T 2vpj_A 79 SVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA 158 (301)
T ss_dssp CEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE
T ss_pred eEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE
Confidence 68899987666 665521 11222222236777788775432 3579999988764 33333322111122223
Q ss_pred CCCEEEEEEcCCceeecCcEEEEeecCc
Q 020756 177 DGRYFMTATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 177 dG~~l~t~~s~~rl~~d~~v~iw~~~g~ 204 (321)
+++.++.++.... ...+.+.+||....
T Consensus 159 ~~~iyv~GG~~~~-~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 159 SGVIYCLGGYDGL-NILNSVEKYDPHTG 185 (301)
T ss_dssp TTEEEEECCBCSS-CBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCC-cccceEEEEeCCCC
Confidence 7777777663211 12356777777443
No 339
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=63.51 E-value=1e+02 Score=29.09 Aligned_cols=172 Identities=15% Similarity=0.165 Sum_probs=103.0
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
|.-.+|.|-++.+ +..+ .+.-.++|.+-|.|+. ..|++-+ ...|..+++... .+.-....
T Consensus 45 ~~~~~vvIiDl~~---~~~~-~rrpi~AdsAIMnP~~--~iiALra-------------g~~lQiFnle~K-~klks~~~ 104 (494)
T 1bpo_A 45 GEQAQVVIIDMND---PSNP-IRRPISADSAIMNPAS--KVIALKA-------------GKTLQIFNIEMK-SKMKAHTM 104 (494)
T ss_dssp TTCCEEEEEETTS---TTSC-EEEECCCSEEEECSSS--SCEEEEE-------------TTEEEEEETTTT-EEEEEEEC
T ss_pred CCCCeEEEEECCC---CCcc-eecccccceeeeCCCC--cEEEEec-------------CCeEEEEchHHh-hhhcceec
Confidence 3445788888888 4444 3334578877666554 4444421 223566666554 33333233
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC--ceeEEe--C----CcCeeeEEEcCCCCeEEEEccCC----CCCc
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC--RPILEL--G----SGPYNTVRWNPKGKFLCLAGFGN----LPGD 149 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~--~~~~~~--~----~~~~~~~~~sPdG~~l~~~g~~n----~~g~ 149 (321)
.++|.-=.|-.+ +.|+++. +..++-|++.+ .++.-| | ...+-...-+++++++++.|... ..|.
T Consensus 105 ~e~VvfWkWis~-~~l~lVT---~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~ 180 (494)
T 1bpo_A 105 TDDVTFWKWISL-NTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (494)
T ss_dssp SSCCCEEEEEET-TEEEEEC---SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEE
T ss_pred CCCceEEEecCC-CeEEEEc---CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccce
Confidence 456767777433 3566652 45799999954 466555 2 33455667789999999987622 3578
Q ss_pred EEEEECCCCeEEEeeeCCCeeeEEEccCCC-----EEEEEEcCCceeecCcEEEEee
Q 020756 150 MAFWDYVDGKQLGTTRAECSVTSEWSPDGR-----YFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 150 i~iwD~~~~~~i~~~~~~~~~~~~wSpdG~-----~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
|.+|..+.+ .-..+++|...-..+-.+|. .|..+...+ ....++|-++
T Consensus 181 mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~---~g~kLhi~Ei 233 (494)
T 1bpo_A 181 MQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ---AGGKLHIIEV 233 (494)
T ss_dssp EEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECST---TCCEEEEEEC
T ss_pred EEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecC---CCcEEEEEEc
Confidence 999998654 34556677555556655553 455555321 1356788777
No 340
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=63.30 E-value=89 Score=28.44 Aligned_cols=102 Identities=12% Similarity=0.124 Sum_probs=63.6
Q ss_pred CCCeEEEEECcCCCEEEEEEcc-------------CCCeEEEEeCCCc---eeEEe--C------CcCeeeEEEc---CC
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGF-------------MPASATIFNKKCR---PILEL--G------SGPYNTVRWN---PK 134 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~-------------~~~~i~i~d~~~~---~~~~~--~------~~~~~~~~~s---Pd 134 (321)
--.|+.+...+.|+.-++=.|. .+.+|.+||++++ .++.+ . ....+.+.+. |.
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 3467888888877765552231 1237889999765 44443 2 3457778777 43
Q ss_pred ----CCeEEEEccCCCCCcEEEEECCCCeEEEeeeC--------------------CCeeeEEEccC----CCEEEEEE
Q 020756 135 ----GKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA--------------------ECSVTSEWSPD----GRYFMTAT 185 (321)
Q Consensus 135 ----G~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~--------------------~~~~~~~wSpd----G~~l~t~~ 185 (321)
+.++.++.. ..+.|.|||+.+++.-..... ..+..++.||+ +++|....
T Consensus 166 ~~c~~~~aYItD~--~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 166 GDCSETFVYITNF--LRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp TTSCSEEEEEEET--TTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE
T ss_pred CCCCccEEEEEcC--CCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE
Confidence 446666653 247899999998854332210 13445788888 77777665
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=61.52 E-value=45 Score=29.15 Aligned_cols=93 Identities=10% Similarity=0.136 Sum_probs=50.8
Q ss_pred CCEEEEEEccCCCeEEEEeCCC--ceeEEeCC----cCeeeEEEcCCCCeEEEEccCC-------CCCcEEEEECCCCe-
Q 020756 94 GSEFAVVYGFMPASATIFNKKC--RPILELGS----GPYNTVRWNPKGKFLCLAGFGN-------LPGDMAFWDYVDGK- 159 (321)
Q Consensus 94 g~~l~~~~g~~~~~i~i~d~~~--~~~~~~~~----~~~~~~~~sPdG~~l~~~g~~n-------~~g~i~iwD~~~~~- 159 (321)
+..|.++.|.....+.+||... .....+.. .........-++++++++|.++ ....+++||..+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 3455555455455788899863 55555522 2222222223677888887511 13579999998763
Q ss_pred -EEEeee-CCCeeeEEEccCCCEEEEEEc
Q 020756 160 -QLGTTR-AECSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 160 -~i~~~~-~~~~~~~~wSpdG~~l~t~~s 186 (321)
.+.... ...........+++.++.++.
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 127 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGV 127 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECC
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCc
Confidence 333322 221112223367888888774
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=60.67 E-value=37 Score=28.82 Aligned_cols=87 Identities=8% Similarity=0.042 Sum_probs=51.2
Q ss_pred cCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCC---------eEEEeeeCCCeeeEEEccCCCEEEEEEcCCceeecC
Q 020756 124 GPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDG---------KQLGTTRAECSVTSEWSPDGRYFMTATTAPRLQIDN 194 (321)
Q Consensus 124 ~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~---------~~i~~~~~~~~~~~~wSpdG~~l~t~~s~~rl~~d~ 194 (321)
..+..++|+|+|.+-++ . .|.++-.+..+. ..|...--+.-..+.|.|+|.+.++ + |+
T Consensus 41 ~~~~~laf~P~G~LYaV-~----~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~-------dG 107 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-L----NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-S-------KD 107 (236)
T ss_dssp TTCSEEEECTTSCEEEE-E----TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-E-------TT
T ss_pred ccceeEEECCCccEEEE-e----CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-C-------CC
Confidence 46779999999997777 3 267777776441 2232211112245789999998888 5 66
Q ss_pred cEEEEee--cC--------ceeEEeccCceEEEEEecCC
Q 020756 195 GIKIFHH--NG--------SLFFKKMFDKLFQAEWKPVS 223 (321)
Q Consensus 195 ~v~iw~~--~g--------~~l~~~~~~~~~~~~w~P~~ 223 (321)
.|.-++- ++ ..+-.....++..+.+.|+.
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G 146 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNG 146 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTS
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCc
Confidence 6655554 22 22222233456666666654
No 343
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=58.21 E-value=87 Score=26.66 Aligned_cols=95 Identities=5% Similarity=0.000 Sum_probs=50.8
Q ss_pred eEEEEeCCCceeEEeCC---cC--eeeEEEcCCCCeEEEEccCCC--CCcEEEEECCCCe--EEEeeeCCCeeeEEEccC
Q 020756 107 SATIFNKKCRPILELGS---GP--YNTVRWNPKGKFLCLAGFGNL--PGDMAFWDYVDGK--QLGTTRAECSVTSEWSPD 177 (321)
Q Consensus 107 ~i~i~d~~~~~~~~~~~---~~--~~~~~~sPdG~~l~~~g~~n~--~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpd 177 (321)
.+.+||...+....+.. .. ...+.+ ++++++++|.... ...+++||..+.+ .+..............-+
T Consensus 138 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 215 (308)
T 1zgk_A 138 SVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLH 215 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred cEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEEC
Confidence 68889998777666521 11 122333 6777788875332 3579999998764 222222221111111226
Q ss_pred CCEEEEEEcCCceeecCcEEEEeecCc
Q 020756 178 GRYFMTATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 178 G~~l~t~~s~~rl~~d~~v~iw~~~g~ 204 (321)
++.++.++.... ..-+.+.+||+...
T Consensus 216 ~~iyv~GG~~~~-~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 216 NCIYAAGGYDGQ-DQLNSVERYDVETE 241 (308)
T ss_dssp TEEEEECCBCSS-SBCCCEEEEETTTT
T ss_pred CEEEEEeCCCCC-CccceEEEEeCCCC
Confidence 777777663210 11356777776543
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=49.77 E-value=2.2e+02 Score=31.13 Aligned_cols=172 Identities=13% Similarity=0.159 Sum_probs=93.3
Q ss_pred CCCceEEEEEcCCcCCCCceeeeecccCccceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCceeeeecCC
Q 020756 2 GSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRK 81 (321)
Q Consensus 2 g~p~~v~v~~~~~~~~~~~i~~~~~f~~~~~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~~~~v~l~~ 81 (321)
|.-++|.|-++.+ +..+ .+.-.+++.+-|.|+. ..|++- .| ..|..+++... .+......
T Consensus 45 ~~~~~vvIidl~~---~~~~-~rrpi~AdsAIMnP~~--~iiALr-------ag------~~lQiFnl~~k-~klks~~~ 104 (1630)
T 1xi4_A 45 GEQAQVVIIDMND---PSNP-IRRPISADSAIMNPAS--KVIALK-------AG------KTLQIFNIEMK-SKMKAHTM 104 (1630)
T ss_pred CCCceEEEEECCC---CCCc-ccccccchhhccCCCc--ceEEEe-------cC------CeEEEeehHHh-hhhccccc
Confidence 3345788888877 3444 3333567877666554 444332 12 22444444322 12222223
Q ss_pred CCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCC--ceeEEe------CCcCeeeEEEcCCCCeEEEEccC----CCCCc
Q 020756 82 EGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKC--RPILEL------GSGPYNTVRWNPKGKFLCLAGFG----NLPGD 149 (321)
Q Consensus 82 ~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~--~~~~~~------~~~~~~~~~~sPdG~~l~~~g~~----n~~g~ 149 (321)
..+|.-=.|-.+ +.|++++ +..|.-|++.+ .++.-| ....+-...-+++.+++++.|.. ...|.
T Consensus 105 ~e~VvfWkWis~-~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~ 180 (1630)
T 1xi4_A 105 TDDVTFWKWISL-NTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (1630)
T ss_pred CCCceEEEecCC-CeeEEEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccce
Confidence 456777777433 3466653 34799999954 354433 24455567788999999998873 24688
Q ss_pred EEEEECCCCeEEEeeeCCCeeeEEEc-----cCCCEEEEEEcCCceeecCcEEEEee
Q 020756 150 MAFWDYVDGKQLGTTRAECSVTSEWS-----PDGRYFMTATTAPRLQIDNGIKIFHH 201 (321)
Q Consensus 150 i~iwD~~~~~~i~~~~~~~~~~~~wS-----pdG~~l~t~~s~~rl~~d~~v~iw~~ 201 (321)
|.+|.++.+ .-..+++|..+-..+- +....+.++...+ ....++|-++
T Consensus 181 mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~---~g~kLhi~Ei 233 (1630)
T 1xi4_A 181 MQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ---AGGKLHIIEV 233 (1630)
T ss_pred eeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecC---CCceEEEEec
Confidence 999988654 2333445532222222 2233444444211 1356777776
No 345
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=49.34 E-value=62 Score=31.40 Aligned_cols=60 Identities=10% Similarity=0.078 Sum_probs=39.4
Q ss_pred CCeEEEEECcCCCEEEEEEcc----------CCCeEEEEeCCCceeEEeC----CcCeeeEEEcCCCCeEEEEc
Q 020756 83 GPVHDVQWSYSGSEFAVVYGF----------MPASATIFNKKCRPILELG----SGPYNTVRWNPKGKFLCLAG 142 (321)
Q Consensus 83 ~~v~~~~wsP~g~~l~~~~g~----------~~~~i~i~d~~~~~~~~~~----~~~~~~~~~sPdG~~l~~~g 142 (321)
....++.++++|...+...+. ....+..++.....+..|- ....+-+.||||++.|.++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456789999999866643221 0125666676544454441 24578899999999988864
No 346
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=49.13 E-value=51 Score=32.02 Aligned_cols=57 Identities=11% Similarity=0.094 Sum_probs=36.6
Q ss_pred EEEEECcCCCEEEEEEccC----------CCeEEEEeCCCceeEEe----CCcCeeeEEEcCCCCeEEEEc
Q 020756 86 HDVQWSYSGSEFAVVYGFM----------PASATIFNKKCRPILEL----GSGPYNTVRWNPKGKFLCLAG 142 (321)
Q Consensus 86 ~~~~wsP~g~~l~~~~g~~----------~~~i~i~d~~~~~~~~~----~~~~~~~~~~sPdG~~l~~~g 142 (321)
-.+.|+|+|+.++.-.+.. ...+.+++.....+..| ....+.-+.|+|||+.|.+.-
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4689999998555532211 12355556655555555 234567799999999887764
No 347
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=48.26 E-value=1.3e+02 Score=25.58 Aligned_cols=52 Identities=8% Similarity=0.021 Sum_probs=33.1
Q ss_pred CeEEEEeCCCceeEEeCC---c--CeeeEEEcCCCCeEEEEccCCC--CCcEEEEECCCCe
Q 020756 106 ASATIFNKKCRPILELGS---G--PYNTVRWNPKGKFLCLAGFGNL--PGDMAFWDYVDGK 159 (321)
Q Consensus 106 ~~i~i~d~~~~~~~~~~~---~--~~~~~~~sPdG~~l~~~g~~n~--~g~i~iwD~~~~~ 159 (321)
..+.+||...+....+.. . ....+.+ ++++++++|..+. ...+++||+.+.+
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 368899998777766521 1 1122333 6777787775321 3679999998764
No 348
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=43.71 E-value=1.4e+02 Score=24.96 Aligned_cols=97 Identities=6% Similarity=0.090 Sum_probs=51.5
Q ss_pred eEEEEeCCCceeEEeCC---cCeeeEEEcCCCCeEEEEccCCC----CCcEEEEECCCCe--EEEeeeCCCeeeEEEccC
Q 020756 107 SATIFNKKCRPILELGS---GPYNTVRWNPKGKFLCLAGFGNL----PGDMAFWDYVDGK--QLGTTRAECSVTSEWSPD 177 (321)
Q Consensus 107 ~i~i~d~~~~~~~~~~~---~~~~~~~~sPdG~~l~~~g~~n~----~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpd 177 (321)
.+.+||...+....+.. .........-++++++++|.... ...+++||..+.+ .+..............-+
T Consensus 125 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 204 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLN 204 (302)
T ss_dssp EEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred eEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEEC
Confidence 57789988777766621 11111112226777777775322 3579999998763 333322221111222336
Q ss_pred CCEEEEEEcCCceeecCcEEEEeecCc
Q 020756 178 GRYFMTATTAPRLQIDNGIKIFHHNGS 204 (321)
Q Consensus 178 G~~l~t~~s~~rl~~d~~v~iw~~~g~ 204 (321)
++.++.++.... ...+.+.+||....
T Consensus 205 ~~iyv~GG~~~~-~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 205 NLLYAVGGHDGP-LVRKSVEVYDPTTN 230 (302)
T ss_dssp TEEEEECCBSSS-SBCCCEEEEETTTT
T ss_pred CEEEEECCCCCC-cccceEEEEeCCCC
Confidence 777777763211 12346777777543
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=40.84 E-value=1.6e+02 Score=28.76 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=52.5
Q ss_pred CeEEEEeCCCceeEEeC-C-------cCe--eeEEEcC-CCCeEEEEccCCC---CCcEEEEECCCC--eEEEeeeCC-C
Q 020756 106 ASATIFNKKCRPILELG-S-------GPY--NTVRWNP-KGKFLCLAGFGNL---PGDMAFWDYVDG--KQLGTTRAE-C 168 (321)
Q Consensus 106 ~~i~i~d~~~~~~~~~~-~-------~~~--~~~~~sP-dG~~l~~~g~~n~---~g~i~iwD~~~~--~~i~~~~~~-~ 168 (321)
..+.+||...+.+..+. . .++ .++...+ +|++++++|..+. -.++++||..+. +.+...... .
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 36888998766555443 1 111 2233333 7888888886432 357999999875 333333222 1
Q ss_pred eeeEEEccCCCEEEEEEcCCceeecCcEEEEeecC
Q 020756 169 SVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 169 ~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
-..+..-.+|+.++.++... +..+.+||...
T Consensus 492 ~h~~~~~~~~~iyv~GG~~~----~~~v~~yd~~t 522 (695)
T 2zwa_A 492 RHSACSLPDGNVLILGGVTE----GPAMLLYNVTE 522 (695)
T ss_dssp SCEEEECTTSCEEEECCBCS----SCSEEEEETTT
T ss_pred cceEEEEcCCEEEEECCCCC----CCCEEEEECCC
Confidence 12223324888888877421 11567777643
No 350
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=40.72 E-value=3.5e+02 Score=28.47 Aligned_cols=107 Identities=13% Similarity=0.187 Sum_probs=60.1
Q ss_pred CCCCeEEEEECcCCCEEEEEEccCCCeEEEEeCCCceeEEe---CCcCeeeEEEcCCCCeEEEEccCCCCCcEEE--EEC
Q 020756 81 KEGPVHDVQWSYSGSEFAVVYGFMPASATIFNKKCRPILEL---GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAF--WDY 155 (321)
Q Consensus 81 ~~~~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~~~~~~---~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~i--wD~ 155 (321)
.+++|++++=- +| +|++..| .++.+|++..+..... .-..+..+.-.-.|++|+++. ....|.+ |+.
T Consensus 884 v~g~v~al~~~-~g-~Lla~ig---~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD---~~~Sv~~~~y~~ 955 (1158)
T 3ei3_A 884 VKGAVYSMVEF-NG-KLLASIN---STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGD---LMRSVLLLAYKP 955 (1158)
T ss_dssp ESSCEEEEEEE-TT-EEEEEET---TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEE---SSBCEEEEEEET
T ss_pred cCCcCEEEeee-CC-EEEEEcC---CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEE---hhheEEEEEEEc
Confidence 47888886633 35 5555334 5899999864422111 111122223333588999987 5556665 455
Q ss_pred CCCeEEEeeeC--C-CeeeEEEccCCCEEEEEEcCCceeecCcEEEEeec
Q 020756 156 VDGKQLGTTRA--E-CSVTSEWSPDGRYFMTATTAPRLQIDNGIKIFHHN 202 (321)
Q Consensus 156 ~~~~~i~~~~~--~-~~~~~~wSpdG~~l~t~~s~~rl~~d~~v~iw~~~ 202 (321)
..++.+..-.. + .++++++=-++ .++.+-. ++.+.+..++
T Consensus 956 ~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~------~gNl~vl~~~ 998 (1158)
T 3ei3_A 956 MEGNFEEIARDFNPNWMSAVEILDDD-NFLGAEN------AFNLFVCQKD 998 (1158)
T ss_dssp TTTEEEEEEECCSCBCEEEEEEEETT-EEEEEET------TSEEEEEEEC
T ss_pred CCCeEEEEEeecccccEEEEEEEccC-cEEEEcC------CCcEEEEecC
Confidence 45443332222 2 67777775554 4555553 7778888763
No 351
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=40.15 E-value=1.7e+02 Score=24.79 Aligned_cols=96 Identities=13% Similarity=0.204 Sum_probs=50.7
Q ss_pred eEEEEeCCCceeEEeCCc---CeeeEEEcCCCCeEEEEccCC---CCCcEEEEECCCCe--EEEeeeCCCeeeEEEccCC
Q 020756 107 SATIFNKKCRPILELGSG---PYNTVRWNPKGKFLCLAGFGN---LPGDMAFWDYVDGK--QLGTTRAECSVTSEWSPDG 178 (321)
Q Consensus 107 ~i~i~d~~~~~~~~~~~~---~~~~~~~sPdG~~l~~~g~~n---~~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpdG 178 (321)
.+.+||...+....+... ........-++++++++|..+ ....+++||..+.+ .+..............-++
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 207 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKG 207 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECC
Confidence 578889987777665321 112222224677778887522 23579999998764 3332222211111222367
Q ss_pred CEEEEEEcCCceeecCcEEEEeecC
Q 020756 179 RYFMTATTAPRLQIDNGIKIFHHNG 203 (321)
Q Consensus 179 ~~l~t~~s~~rl~~d~~v~iw~~~g 203 (321)
+.++.++.... ...+.+.+||...
T Consensus 208 ~iyv~GG~~~~-~~~~~~~~yd~~~ 231 (318)
T 2woz_A 208 KIVIAGGVTED-GLSASVEAFDLKT 231 (318)
T ss_dssp EEEEEEEEETT-EEEEEEEEEETTT
T ss_pred EEEEEcCcCCC-CccceEEEEECCC
Confidence 77777763211 0123456666643
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=40.06 E-value=29 Score=36.49 Aligned_cols=37 Identities=11% Similarity=0.086 Sum_probs=31.3
Q ss_pred eeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEEeee
Q 020756 126 YNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTR 165 (321)
Q Consensus 126 ~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~ 165 (321)
+.++...++..+|++.+ .|+.+++||+.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~---~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLS---LDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEB---TTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEe---CCCEEEEEECCCCCeEEeec
Confidence 35567778889998888 99999999999999988754
No 353
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=36.54 E-value=4e+02 Score=27.99 Aligned_cols=173 Identities=10% Similarity=0.105 Sum_probs=86.0
Q ss_pred ceEEEEEcCCcCCCCceeeeecc-cCccceEEeCCCCCeeEEEEEe-c-ccCCCce------------------------
Q 020756 5 ASVQIYACGKDLQSQPLARRSFF-RCSTVQLNWNRGSTGLLAVAQS-D-VDKTNQS------------------------ 57 (321)
Q Consensus 5 ~~v~v~~~~~~~~~~~i~~~~~f-~~~~~~~~Wsp~G~~l~~~~~~-d-~d~t~~s------------------------ 57 (321)
..++|..++.. +.+.++++- ......+.++|..+.+++++.. + .+..+..
T Consensus 715 ~~LrI~~i~~~---~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1158)
T 3ei3_A 715 STLTIGTIDEI---QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSS 791 (1158)
T ss_dssp SCEEEEEECCS---SSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC--
T ss_pred CceEEEEeccc---CCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccc
Confidence 45788888763 333333321 3456678888887766665432 1 1111100
Q ss_pred -------ee----cceeEEEEEcCC-CceeeeecCCCCCeEEEE---ECcC-CCEEEEEEcc--------CCCeEEEEeC
Q 020756 58 -------YY----GESKLNYLTTDG-THEGLVPLRKEGPVHDVQ---WSYS-GSEFAVVYGF--------MPASATIFNK 113 (321)
Q Consensus 58 -------~~----g~~~l~~l~~~g-~~~~~v~l~~~~~v~~~~---wsP~-g~~l~~~~g~--------~~~~i~i~d~ 113 (321)
-+ ....+.+++... .....+.+.....+.+++ +..+ ..+|++-.+. ..|.|.+|++
T Consensus 792 ~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v 871 (1158)
T 3ei3_A 792 STAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQY 871 (1158)
T ss_dssp --------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEE
T ss_pred cccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEE
Confidence 00 112344555432 222344555555555544 3333 3466654321 2358999987
Q ss_pred CCceeEEe----CCcCeeeEEEcCCCCeEEEEccCCCCCcEEEEECCCCeEEE-eee-CCCeeeEEEccCCCEEEEEEc
Q 020756 114 KCRPILEL----GSGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDGKQLG-TTR-AECSVTSEWSPDGRYFMTATT 186 (321)
Q Consensus 114 ~~~~~~~~----~~~~~~~~~~sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~-~~~-~~~~~~~~wSpdG~~l~t~~s 186 (321)
....+..+ -.+.+.++.-- +|++|+..| ..|.+||+...+.+. ... ...++.+...-.|.+|+.+..
T Consensus 872 ~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig-----~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~ 944 (1158)
T 3ei3_A 872 SDGKLQTVAEKEVKGAVYSMVEF-NGKLLASIN-----STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDL 944 (1158)
T ss_dssp ETTEEEEEEEEEESSCEEEEEEE-TTEEEEEET-----TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEES
T ss_pred ECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcC-----CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEh
Confidence 53333222 25666665422 365555444 789999987554222 111 112332233335677777773
No 354
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=34.98 E-value=2e+02 Score=24.04 Aligned_cols=80 Identities=6% Similarity=0.050 Sum_probs=42.4
Q ss_pred CeEEEEeCCCceeEEeCC---cCeeeEEEcCCCCeEEEEccCCC--CCcEEEEECCCCe--EEEeeeCCCeeeEEEccCC
Q 020756 106 ASATIFNKKCRPILELGS---GPYNTVRWNPKGKFLCLAGFGNL--PGDMAFWDYVDGK--QLGTTRAECSVTSEWSPDG 178 (321)
Q Consensus 106 ~~i~i~d~~~~~~~~~~~---~~~~~~~~sPdG~~l~~~g~~n~--~g~i~iwD~~~~~--~i~~~~~~~~~~~~wSpdG 178 (321)
..+.+||...+....+.. .........-++++++++|..+. ...+++||..+.+ .+..............-++
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 252 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNG 252 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECC
Confidence 358899998877766521 11111112226777788774321 3579999998764 3332222111111222366
Q ss_pred CEEEEEE
Q 020756 179 RYFMTAT 185 (321)
Q Consensus 179 ~~l~t~~ 185 (321)
+.++.++
T Consensus 253 ~i~v~GG 259 (302)
T 2xn4_A 253 LLYVVGG 259 (302)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 6666665
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=27.35 E-value=3.1e+02 Score=28.02 Aligned_cols=35 Identities=0% Similarity=0.013 Sum_probs=25.9
Q ss_pred CeEEEEECcCCCEEEEEEccCCCeEEEEeCCCc-eeEE
Q 020756 84 PVHDVQWSYSGSEFAVVYGFMPASATIFNKKCR-PILE 120 (321)
Q Consensus 84 ~v~~~~wsP~g~~l~~~~g~~~~~i~i~d~~~~-~~~~ 120 (321)
.+.++...++..+++++ +.|+++++|++... .+.+
T Consensus 237 ~~~~~~~~~~~~~lftl--~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVML--SLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEE--ETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEE--ECCCEEEEEECCCCCeEee
Confidence 56778888888888776 56899999998543 4443
No 356
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=25.13 E-value=1.1e+02 Score=30.36 Aligned_cols=32 Identities=9% Similarity=0.149 Sum_probs=26.2
Q ss_pred cCCCCeEEEEccCCCCCcEEEEECCCCeEEEeeeC
Q 020756 132 NPKGKFLCLAGFGNLPGDMAFWDYVDGKQLGTTRA 166 (321)
Q Consensus 132 sPdG~~l~~~g~~n~~g~i~iwD~~~~~~i~~~~~ 166 (321)
..+..+|++-+ .|..+++||+++++++.+..-
T Consensus 228 ~~~~~fLftL~---~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLT---QNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEE---TTCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEE---cCCeEEEEEcCCCceEEeecc
Confidence 34577888888 899999999999998877554
No 357
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=22.27 E-value=1.6e+02 Score=20.45 Aligned_cols=40 Identities=10% Similarity=0.119 Sum_probs=24.6
Q ss_pred CceEEEEEcCCcCCC---CceeeeecccCccceEEeCCCCCee
Q 020756 4 PASVQIYACGKDLQS---QPLARRSFFRCSTVQLNWNRGSTGL 43 (321)
Q Consensus 4 p~~v~v~~~~~~~~~---~~i~~~~~f~~~~~~~~Wsp~G~~l 43 (321)
|-.|+|+.-.....+ ..++...-|--..+.+.|-.+|..+
T Consensus 4 ~P~V~v~~~~~~~~~~~~~L~C~~~gFyP~~i~v~W~~~g~~~ 46 (97)
T 3gbl_A 4 SPKIQVYSHYPGEYGKENTLICYVSGFHPPDISIELLKNGEVI 46 (97)
T ss_dssp CCEEEEEESSCCCTTCCEEEEEEEECCBSSCEEEEEEETTEEC
T ss_pred CCEEEEEcCCcccCCCcEEEEEEEcceeCCccEEEEEECCccC
Confidence 567888865321112 2345555554456899999998765
No 358
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=22.17 E-value=5e+02 Score=25.49 Aligned_cols=72 Identities=8% Similarity=0.110 Sum_probs=43.7
Q ss_pred ceEEeCCCCCeeEEEEEecccCCCceeecceeEEEEEcCCCc--eee-eecCCCCCeEEEEECcCCCEEEEEEcc--CCC
Q 020756 32 VQLNWNRGSTGLLAVAQSDVDKTNQSYYGESKLNYLTTDGTH--EGL-VPLRKEGPVHDVQWSYSGSEFAVVYGF--MPA 106 (321)
Q Consensus 32 ~~~~Wsp~G~~l~~~~~~d~d~t~~s~~g~~~l~~l~~~g~~--~~~-v~l~~~~~v~~~~wsP~g~~l~~~~g~--~~~ 106 (321)
..+.|..+ .|++....+ |...|+.++..++. ... +.+...+.+..+..++++..+++.+.+ .+.
T Consensus 353 ~~~~~~~~--~l~~~~~~~---------~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~ 421 (711)
T 4hvt_A 353 NFISTTKD--RVFLATYDN---------VVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPP 421 (711)
T ss_dssp EEEEECSS--CEEEEEEET---------TEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCC
T ss_pred EEEEEECC--EEEEEEEEC---------CEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCC
Confidence 35667654 454443221 44557777654331 233 555555678888888988877665433 567
Q ss_pred eEEEEeCC
Q 020756 107 SATIFNKK 114 (321)
Q Consensus 107 ~i~i~d~~ 114 (321)
.+..+|+.
T Consensus 422 ~~~~~d~~ 429 (711)
T 4hvt_A 422 TIYLWVKT 429 (711)
T ss_dssp EEEEECTT
T ss_pred EEEEEeCC
Confidence 88888876
No 359
>3kxs_F Capsid protein; core protein, hepadnavirus, four helix bundle, icosahedral, dimer, DNA-binding, HOST cytoplasm; 2.25A {Hepatitis b virus subtype adyw} SCOP: a.62.1.1 PDB: 2g33_C 2g34_C 1qgt_C
Probab=20.84 E-value=33 Score=25.77 Aligned_cols=10 Identities=60% Similarity=1.056 Sum_probs=7.5
Q ss_pred CCCccCCCCC
Q 020756 266 KPAAYRPPHA 275 (321)
Q Consensus 266 ~~~~y~pp~~ 275 (321)
-|.+||||.|
T Consensus 128 tppayrppna 137 (143)
T 3kxs_F 128 TPPAARPPNA 137 (143)
T ss_dssp SCTTTSCSCC
T ss_pred CCcccCCCCC
Confidence 3557999986
Done!