Query 020757
Match_columns 321
No_of_seqs 267 out of 2021
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 04:54:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020757.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020757hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 7.2E-81 1.6E-85 551.5 17.6 288 5-301 2-290 (303)
2 PTZ00480 serine/threonine-prot 100.0 3.9E-77 8.5E-82 562.0 30.0 304 3-306 8-311 (320)
3 KOG0374 Serine/threonine speci 100.0 4.3E-77 9.3E-82 563.6 25.9 315 2-316 5-330 (331)
4 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.6E-75 3.5E-80 547.8 28.5 291 6-296 2-292 (293)
5 PTZ00244 serine/threonine-prot 100.0 1.9E-75 4.2E-80 546.8 28.1 292 4-295 2-293 (294)
6 cd07420 MPP_RdgC Drosophila me 100.0 1.8E-74 4E-79 544.6 30.7 283 2-293 3-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 2.5E-74 5.5E-79 537.8 27.9 283 6-297 2-285 (285)
8 PTZ00239 serine/threonine prot 100.0 1.2E-73 2.7E-78 536.3 28.9 286 6-300 3-290 (303)
9 smart00156 PP2Ac Protein phosp 100.0 4.7E-72 1E-76 520.0 28.8 270 27-296 1-270 (271)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 4.2E-72 9.2E-77 529.1 27.0 289 2-299 12-307 (316)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 1E-71 2.3E-76 525.0 29.6 284 6-298 3-299 (305)
12 KOG0373 Serine/threonine speci 100.0 1.7E-72 3.6E-77 491.5 17.2 290 1-299 1-292 (306)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.4E-70 3E-75 519.2 27.5 287 9-295 1-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 3.4E-67 7.4E-72 502.4 30.2 294 2-296 8-366 (377)
15 KOG0375 Serine-threonine phosp 100.0 8E-66 1.7E-70 475.8 12.7 270 26-296 60-342 (517)
16 KOG0371 Serine/threonine prote 100.0 2.2E-63 4.9E-68 442.8 13.0 285 6-299 20-305 (319)
17 KOG0377 Protein serine/threoni 100.0 1.8E-56 4E-61 422.1 15.4 281 3-292 118-428 (631)
18 KOG0376 Serine-threonine phosp 100.0 5.5E-49 1.2E-53 378.5 12.5 282 26-308 182-472 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.3E-36 2.9E-41 273.7 19.3 214 57-281 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.9 9.4E-27 2E-31 208.8 15.8 176 57-267 1-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 9.6E-27 2.1E-31 213.6 14.7 193 54-285 1-225 (245)
22 PRK00166 apaH diadenosine tetr 99.9 8.6E-25 1.9E-29 203.5 17.6 218 54-286 1-262 (275)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 1.1E-24 2.4E-29 197.2 15.9 115 57-174 2-143 (222)
24 cd07423 MPP_PrpE Bacillus subt 99.9 2.4E-24 5.1E-29 196.4 17.4 121 54-177 1-143 (234)
25 cd07422 MPP_ApaH Escherichia c 99.9 1.9E-24 4.1E-29 199.3 12.2 125 56-185 1-132 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 2.5E-24 5.5E-29 199.3 12.5 127 54-185 1-134 (279)
27 PRK11439 pphA serine/threonine 99.9 2.2E-23 4.7E-28 188.2 13.3 177 54-269 17-208 (218)
28 PHA02239 putative protein phos 99.9 9.6E-23 2.1E-27 185.9 14.0 174 54-269 1-221 (235)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 3.6E-22 7.7E-27 178.7 15.7 180 54-267 1-195 (207)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.7E-22 8E-27 185.3 15.5 74 55-128 3-83 (304)
31 PRK09968 serine/threonine-spec 99.9 4.2E-21 9.2E-26 173.3 12.0 115 54-174 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.4 9.1E-13 2E-17 109.1 10.8 159 54-248 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 2.1E-10 4.5E-15 97.4 15.5 83 55-174 1-86 (155)
34 PF12850 Metallophos_2: Calcin 99.3 1.5E-10 3.2E-15 97.5 13.8 152 54-283 1-152 (156)
35 TIGR00040 yfcE phosphoesterase 99.1 1.4E-09 3.1E-14 92.9 14.4 63 54-125 1-64 (158)
36 PRK09453 phosphodiesterase; Pr 99.1 2E-10 4.3E-15 100.6 8.9 69 54-126 1-77 (182)
37 cd07379 MPP_239FB Homo sapiens 99.0 2.8E-09 6.1E-14 88.7 10.7 118 55-253 1-120 (135)
38 COG0639 ApaH Diadenosine tetra 99.0 7.4E-10 1.6E-14 91.4 6.2 143 127-270 3-154 (155)
39 cd07388 MPP_Tt1561 Thermus the 98.9 1.4E-08 3E-13 92.2 11.9 72 53-125 4-75 (224)
40 cd07397 MPP_DevT Myxococcus xa 98.9 8.3E-09 1.8E-13 94.2 10.3 156 55-249 2-208 (238)
41 cd00838 MPP_superfamily metall 98.8 3.7E-08 8E-13 79.0 11.2 118 57-254 1-120 (131)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.8 9.3E-08 2E-12 82.9 11.4 66 56-127 1-67 (188)
43 cd07394 MPP_Vps29 Homo sapiens 98.7 7.6E-07 1.7E-11 78.0 16.9 59 55-125 1-65 (178)
44 cd07404 MPP_MS158 Microscilla 98.7 9E-08 2E-12 82.2 8.7 67 56-125 1-68 (166)
45 PRK05340 UDP-2,3-diacylglucosa 98.7 8.2E-07 1.8E-11 81.2 15.0 207 54-286 1-232 (241)
46 cd07403 MPP_TTHA0053 Thermus t 98.6 9E-07 1.9E-11 73.4 11.3 107 57-253 1-107 (129)
47 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 1.7E-06 3.7E-11 78.7 13.7 205 56-285 1-229 (231)
48 cd07400 MPP_YydB Bacillus subt 98.4 4.3E-06 9.3E-11 69.8 12.8 118 56-254 1-130 (144)
49 COG0622 Predicted phosphoester 98.3 2.4E-05 5.2E-10 68.2 15.3 159 54-294 2-164 (172)
50 cd07399 MPP_YvnB Bacillus subt 98.2 3.7E-05 7.9E-10 69.2 14.7 70 55-124 2-81 (214)
51 PRK11148 cyclic 3',5'-adenosin 98.2 7.1E-05 1.5E-09 69.7 17.1 71 53-125 14-98 (275)
52 PRK11340 phosphodiesterase Yae 98.2 4.2E-06 9E-11 78.0 7.1 70 54-125 50-125 (271)
53 cd07383 MPP_Dcr2 Saccharomyces 98.2 6.9E-05 1.5E-09 66.3 14.3 70 54-123 3-87 (199)
54 cd07385 MPP_YkuE_C Bacillus su 98.1 5.4E-06 1.2E-10 74.2 6.5 71 54-126 2-77 (223)
55 cd07396 MPP_Nbla03831 Homo sap 98.1 9.5E-05 2.1E-09 68.6 14.6 73 55-127 2-88 (267)
56 cd07395 MPP_CSTP1 Homo sapiens 98.0 0.00028 6E-09 65.0 15.7 71 55-125 6-99 (262)
57 TIGR03729 acc_ester putative p 98.0 1.7E-05 3.7E-10 72.4 6.7 68 55-125 1-74 (239)
58 COG1409 Icc Predicted phosphoh 97.9 0.00045 9.7E-09 63.6 15.9 74 54-128 1-81 (301)
59 COG2129 Predicted phosphoester 97.9 0.0015 3.3E-08 58.9 18.0 205 53-285 3-217 (226)
60 KOG0376 Serine-threonine phosp 97.9 1.8E-06 3.9E-11 84.8 -0.7 281 26-318 14-358 (476)
61 TIGR00619 sbcd exonuclease Sbc 97.9 3.8E-05 8.3E-10 71.0 7.1 73 54-126 1-89 (253)
62 PHA02546 47 endonuclease subun 97.8 4.1E-05 8.9E-10 73.8 6.8 73 54-126 1-90 (340)
63 cd07390 MPP_AQ1575 Aquifex aeo 97.7 0.0001 2.3E-09 63.6 7.6 67 56-127 1-84 (168)
64 cd07398 MPP_YbbF-LpxH Escheric 97.7 0.00012 2.5E-09 65.2 7.5 29 225-253 177-205 (217)
65 PRK04036 DNA polymerase II sma 97.6 0.00018 3.8E-09 72.9 8.7 113 53-172 243-387 (504)
66 cd07402 MPP_GpdQ Enterobacter 97.6 0.00017 3.7E-09 65.2 7.8 69 55-125 1-83 (240)
67 cd07391 MPP_PF1019 Pyrococcus 97.6 0.00018 3.8E-09 62.4 7.3 58 69-126 30-89 (172)
68 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00013 2.8E-09 67.9 6.6 70 56-125 1-86 (262)
69 cd00840 MPP_Mre11_N Mre11 nucl 97.6 0.00018 3.9E-09 64.0 6.6 74 55-128 1-92 (223)
70 cd07401 MPP_TMEM62_N Homo sapi 97.6 0.00048 1E-08 63.7 9.5 71 56-126 2-90 (256)
71 COG2908 Uncharacterized protei 97.5 0.00077 1.7E-08 61.2 10.4 198 57-287 1-229 (237)
72 cd08165 MPP_MPPE1 human MPPE1 97.5 0.00082 1.8E-08 57.5 10.0 47 80-126 38-90 (156)
73 PRK10966 exonuclease subunit S 97.5 0.00025 5.4E-09 70.0 7.3 72 54-126 1-88 (407)
74 PF06874 FBPase_2: Firmicute f 97.5 0.0018 4E-08 65.9 12.8 69 225-295 507-585 (640)
75 TIGR00583 mre11 DNA repair pro 97.4 0.00055 1.2E-08 67.5 7.8 74 53-126 3-124 (405)
76 TIGR00024 SbcD_rel_arch putati 97.3 0.0007 1.5E-08 61.6 7.5 69 54-126 15-103 (225)
77 cd00839 MPP_PAPs purple acid p 97.3 0.0033 7.2E-08 58.6 11.6 70 54-127 5-83 (294)
78 cd07393 MPP_DR1119 Deinococcus 97.2 0.00094 2E-08 60.7 6.6 45 224-270 180-227 (232)
79 COG1408 Predicted phosphohydro 96.9 0.0077 1.7E-07 56.7 10.3 72 54-127 45-120 (284)
80 COG4186 Predicted phosphoester 96.9 0.0035 7.6E-08 53.5 7.1 71 55-129 5-90 (186)
81 cd07386 MPP_DNA_pol_II_small_a 96.7 0.0047 1E-07 56.4 7.0 68 57-126 2-95 (243)
82 cd07380 MPP_CWF19_N Schizosacc 96.6 0.0045 9.8E-08 52.8 5.6 119 57-248 1-121 (150)
83 cd07384 MPP_Cdc1_like Saccharo 96.5 0.0059 1.3E-07 53.1 5.7 47 80-126 45-101 (171)
84 cd08163 MPP_Cdc1 Saccharomyces 96.4 0.037 8.1E-07 51.3 10.8 24 224-247 203-226 (257)
85 cd08166 MPP_Cdc1_like_1 unchar 96.3 0.0091 2E-07 53.1 5.8 46 80-125 42-93 (195)
86 cd00845 MPP_UshA_N_like Escher 96.1 0.0097 2.1E-07 54.3 5.5 66 55-125 2-82 (252)
87 COG0420 SbcD DNA repair exonuc 96.1 0.018 4E-07 56.3 7.4 74 54-127 1-90 (390)
88 COG1407 Predicted ICC-like pho 96.0 0.039 8.5E-07 50.4 8.9 73 53-128 19-113 (235)
89 PF14582 Metallophos_3: Metall 95.8 0.0093 2E-07 54.0 3.7 73 54-126 6-103 (255)
90 COG1311 HYS2 Archaeal DNA poly 95.8 0.31 6.7E-06 48.7 14.5 206 55-285 227-461 (481)
91 cd08164 MPP_Ted1 Saccharomyces 95.3 0.039 8.5E-07 49.0 5.8 65 61-125 24-111 (193)
92 cd07410 MPP_CpdB_N Escherichia 95.2 0.028 6.1E-07 52.3 5.0 65 55-124 2-94 (277)
93 PLN02533 probable purple acid 94.9 0.039 8.4E-07 54.9 5.1 71 53-126 139-212 (427)
94 cd07378 MPP_ACP5 Homo sapiens 94.4 0.097 2.1E-06 48.3 6.2 70 55-125 2-83 (277)
95 cd07408 MPP_SA0022_N Staphyloc 94.0 0.083 1.8E-06 48.7 5.0 66 55-125 2-82 (257)
96 PF08321 PPP5: PPP5 TPR repeat 94.0 0.14 3E-06 40.3 5.5 44 1-52 52-95 (95)
97 COG1768 Predicted phosphohydro 93.1 0.38 8.3E-06 42.2 7.1 74 79-163 42-117 (230)
98 cd07412 MPP_YhcR_N Bacillus su 93.0 0.1 2.3E-06 49.0 3.9 66 55-125 2-88 (288)
99 KOG3325 Membrane coat complex 92.1 2.3 5.1E-05 36.2 10.3 115 56-253 3-123 (183)
100 cd07411 MPP_SoxB_N Thermus the 91.9 0.28 6.2E-06 45.3 5.3 64 56-125 3-95 (264)
101 KOG0918 Selenium-binding prote 91.5 0.017 3.7E-07 56.1 -3.4 204 80-294 47-261 (476)
102 cd00842 MPP_ASMase acid sphing 91.1 0.46 9.9E-06 44.5 5.8 71 56-127 40-124 (296)
103 KOG3662 Cell division control 90.7 0.5 1.1E-05 46.6 5.7 44 81-124 94-143 (410)
104 PRK09419 bifunctional 2',3'-cy 89.8 0.43 9.4E-06 53.4 5.0 66 54-124 661-735 (1163)
105 KOG2863 RNA lariat debranching 89.7 0.42 9.2E-06 46.1 4.2 74 54-127 1-90 (456)
106 cd07409 MPP_CD73_N CD73 ecto-5 89.4 0.6 1.3E-05 43.6 5.1 66 55-125 2-94 (281)
107 cd07406 MPP_CG11883_N Drosophi 87.6 1.1 2.3E-05 41.3 5.4 56 64-124 21-82 (257)
108 PF04042 DNA_pol_E_B: DNA poly 87.4 1.1 2.3E-05 39.7 5.1 72 56-127 1-93 (209)
109 TIGR00282 metallophosphoestera 87.3 1.3 2.9E-05 41.2 5.8 67 54-125 1-71 (266)
110 cd07387 MPP_PolD2_C PolD2 (DNA 86.8 27 0.00058 32.5 17.4 47 239-290 205-254 (257)
111 COG0737 UshA 5'-nucleotidase/2 84.0 1.3 2.7E-05 45.2 4.3 68 53-125 26-115 (517)
112 KOG2476 Uncharacterized conser 83.4 2.3 4.9E-05 42.4 5.5 69 53-122 5-75 (528)
113 cd07407 MPP_YHR202W_N Saccharo 81.9 1.9 4.1E-05 40.5 4.3 66 55-125 7-97 (282)
114 KOG1432 Predicted DNA repair e 80.9 2.6 5.7E-05 40.6 4.8 73 54-127 54-149 (379)
115 cd07405 MPP_UshA_N Escherichia 80.3 1.7 3.8E-05 40.7 3.4 15 236-250 208-222 (285)
116 cd08162 MPP_PhoA_N Synechococc 78.8 3.1 6.8E-05 39.6 4.7 64 56-124 3-90 (313)
117 PRK09420 cpdB bifunctional 2', 77.7 3.1 6.7E-05 43.8 4.7 68 52-124 24-121 (649)
118 cd07382 MPP_DR1281 Deinococcus 77.6 5.8 0.00012 36.8 5.9 66 55-125 1-70 (255)
119 COG3855 Fbp Uncharacterized pr 77.5 1.7 3.7E-05 43.3 2.5 41 82-127 192-232 (648)
120 TIGR01390 CycNucDiestase 2',3' 76.9 3.3 7.2E-05 43.3 4.6 66 54-124 3-98 (626)
121 PRK09419 bifunctional 2',3'-cy 75.4 3.7 8E-05 46.1 4.8 23 226-248 256-279 (1163)
122 PTZ00235 DNA polymerase epsilo 74.0 11 0.00024 35.6 6.8 73 54-126 28-123 (291)
123 PF14164 YqzH: YqzH-like prote 72.0 16 0.00034 26.6 5.6 47 1-48 1-47 (64)
124 PRK09558 ushA bifunctional UDP 71.8 6.2 0.00013 40.5 5.1 68 53-125 34-121 (551)
125 PRK11907 bifunctional 2',3'-cy 69.1 7.1 0.00015 42.1 4.9 67 53-124 115-212 (814)
126 TIGR01530 nadN NAD pyrophospha 68.8 8.7 0.00019 39.5 5.4 65 56-125 3-94 (550)
127 PTZ00422 glideosome-associated 68.7 10 0.00022 37.5 5.5 72 54-125 27-109 (394)
128 KOG3339 Predicted glycosyltran 64.5 45 0.00097 29.6 8.0 85 82-171 40-140 (211)
129 KOG3947 Phosphoesterases [Gene 64.3 9.1 0.0002 35.9 4.0 64 55-126 63-127 (305)
130 PF13258 DUF4049: Domain of un 64.1 18 0.00039 33.2 5.7 88 82-175 86-186 (318)
131 KOG1378 Purple acid phosphatas 61.4 11 0.00024 37.7 4.3 34 227-260 322-355 (452)
132 KOG2310 DNA repair exonuclease 59.8 29 0.00063 35.6 6.9 52 53-104 13-76 (646)
133 PRK09418 bifunctional 2',3'-cy 55.6 16 0.00034 39.4 4.6 68 52-124 38-141 (780)
134 KOG2679 Purple (tartrate-resis 52.6 16 0.00035 34.3 3.5 68 54-125 44-126 (336)
135 PF06874 FBPase_2: Firmicute f 51.4 14 0.0003 38.4 3.2 40 83-127 187-226 (640)
136 PF02875 Mur_ligase_C: Mur lig 42.4 89 0.0019 23.4 5.8 70 53-122 11-82 (91)
137 PF12641 Flavodoxin_3: Flavodo 37.7 1.4E+02 0.003 25.6 6.8 58 57-117 2-72 (160)
138 COG4320 Uncharacterized protei 35.4 89 0.0019 30.2 5.6 61 42-110 45-109 (410)
139 PRK10773 murF UDP-N-acetylmura 29.4 1.6E+02 0.0035 29.3 6.8 67 53-120 324-392 (453)
140 PF15007 CEP44: Centrosomal sp 29.2 20 0.00043 29.9 0.2 83 61-159 1-87 (131)
141 TIGR00282 metallophosphoestera 26.4 51 0.0011 30.8 2.4 39 83-125 2-41 (266)
142 PLN00084 photosystem II subuni 24.0 46 0.00099 29.0 1.5 37 87-124 9-52 (214)
143 PF09637 Med18: Med18 protein; 24.0 1.3E+02 0.0029 27.5 4.7 39 225-266 139-177 (250)
144 PF02609 Exonuc_VII_S: Exonucl 23.6 2.4E+02 0.0053 19.2 4.9 34 3-45 5-38 (53)
145 TIGR03729 acc_ester putative p 23.4 1.2E+02 0.0027 27.1 4.3 30 223-252 195-224 (239)
146 COG3855 Fbp Uncharacterized pr 22.4 37 0.00081 34.2 0.7 56 226-281 515-579 (648)
147 PF12976 DUF3860: Domain of Un 21.8 2.8E+02 0.0061 21.0 5.1 17 1-17 1-17 (92)
148 PF09949 DUF2183: Uncharacteri 21.8 3.3E+02 0.0073 21.3 6.0 41 68-117 54-94 (100)
149 cd07382 MPP_DR1281 Deinococcus 20.9 89 0.0019 28.9 2.9 37 83-120 1-37 (255)
150 KOG3425 Uncharacterized conser 20.7 3.1E+02 0.0066 22.7 5.5 57 66-125 12-79 (128)
151 TIGR01143 murF UDP-N-acetylmur 20.6 4.3E+02 0.0094 25.8 7.9 77 36-122 312-406 (417)
152 smart00854 PGA_cap Bacterial c 20.0 2.1E+02 0.0046 25.6 5.2 40 229-270 197-236 (239)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-81 Score=551.54 Aligned_cols=288 Identities=48% Similarity=0.957 Sum_probs=277.8
Q ss_pred HHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceE
Q 020757 5 VLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANY 84 (321)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~ 84 (321)
+++..|++|.+.+ .+.++++..||.+++++|.+|++++.++.|++|+|||||++.||+.+|+..|-+++++|
T Consensus 2 dldr~ie~L~~~~--------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~Y 73 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE--------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNY 73 (303)
T ss_pred cHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCce
Confidence 5788899998876 78999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhc-hhhhhhhccccccCCeEEEEc
Q 020757 85 LFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLPVAALVD 163 (321)
Q Consensus 85 vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPl~~~i~ 163 (321)
+|||||||||.+|+|++.+|++||++||++|++||||||.+.++..|||++||.++|+ ..+|+...+.|++||++|+|+
T Consensus 74 LFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid 153 (303)
T KOG0372|consen 74 LFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIID 153 (303)
T ss_pred EeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheec
Confidence 9999999999999999999999999999999999999999999999999999999996 589999999999999999999
Q ss_pred CcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEE
Q 020757 164 EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICR 243 (321)
Q Consensus 164 ~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIr 243 (321)
+++||||||+||.+.++++|+.+.|..++|..+.++|+|||||.+. .+|.-++||+|+.||.+++++|++.||+++|+|
T Consensus 154 ~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~R 232 (303)
T KOG0372|consen 154 GKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICR 232 (303)
T ss_pred CcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHH
Confidence 9999999999999999999999999999999999999999999865 699999999999999999999999999999999
Q ss_pred eeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEecccccCc
Q 020757 244 AHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 301 (321)
Q Consensus 244 gH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 301 (321)
+||.+.+||++.++++++|||||||||+...|.||||.++++....|.+|+..+...+
T Consensus 233 aHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~ 290 (303)
T KOG0372|consen 233 AHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESR 290 (303)
T ss_pred HHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhc
Confidence 9999999999999999999999999999999999999999999999999987765544
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=3.9e-77 Score=562.05 Aligned_cols=304 Identities=75% Similarity=1.345 Sum_probs=289.7
Q ss_pred hhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCc
Q 020757 3 ETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEA 82 (321)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~ 82 (321)
+..++++|+++++.+...++....++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..++++.+
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~ 87 (320)
T PTZ00480 8 EIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES 87 (320)
T ss_pred CcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc
Confidence 34589999999998766666677899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEE
Q 020757 83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALV 162 (321)
Q Consensus 83 ~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i 162 (321)
+|||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..++++|++||+||+|
T Consensus 88 ~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI 167 (320)
T PTZ00480 88 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALI 167 (320)
T ss_pred eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEE
Q 020757 163 DEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLIC 242 (321)
Q Consensus 163 ~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iI 242 (321)
++++|||||||+|.+.++++|+++.||.+.++.+++.|+|||||.....+|.+++||.|+.||++++++||++|++++||
T Consensus 168 ~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~Ii 247 (320)
T PTZ00480 168 DEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLIC 247 (320)
T ss_pred cCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEE
Confidence 99999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred EeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEecccccCcccCCC
Q 020757 243 RAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGN 306 (321)
Q Consensus 243 rgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (321)
||||++++||+++++++|+|||||||||+..+|+||+|.|++++.+.|.+++|.+.+...++.+
T Consensus 248 R~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~~~~~ 311 (320)
T PTZ00480 248 RAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQGASQQN 311 (320)
T ss_pred EcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999888776655543
No 3
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=4.3e-77 Score=563.60 Aligned_cols=315 Identities=67% Similarity=1.191 Sum_probs=292.2
Q ss_pred ChhHHHHHHHHHHhccCCCCCc--cccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCC-C
Q 020757 2 DETVLDDIIRRLLDAKNGRTTK--QVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGG-Y 78 (321)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~-~ 78 (321)
....++++|.+++......... ...++.+++.+||..+.++|..+|+++++++||.|+|||||+|.||+++|...| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 3456778888888876433222 445999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhc-hhhhhhhccccccCC
Q 020757 79 PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLP 157 (321)
Q Consensus 79 ~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP 157 (321)
|++.+|||||||||||++|+|++.+|+++|++||++|++||||||.+.++..|||++||.++|+ ..+|+.|++.|+.||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 699999999999999
Q ss_pred eEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCC
Q 020757 158 VAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHD 237 (321)
Q Consensus 158 l~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~ 237 (321)
++|+|+++++|+|||++|.+.++++|+.+.||.+.++.+++.|++||||.....+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred CceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEecc---cccC----cccCCCCCCC
Q 020757 238 LDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKAS---EKKG----KVGFGNNMLR 310 (321)
Q Consensus 238 ~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~ 310 (321)
+++||||||++++||+++.++|++||||||+|||.++|+||+|.+++++.++|++++|. .+.. ...-+-+..|
T Consensus 245 ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~~~~~~~~~~~~~~~~~~~~~ 324 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEGGIDKDKIEALGVGSDKKAIL 324 (331)
T ss_pred cceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEecccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999995 2221 1122446678
Q ss_pred CCCCCC
Q 020757 311 PGTPPH 316 (321)
Q Consensus 311 ~~~~~~ 316 (321)
+.+|++
T Consensus 325 ~~~~~~ 330 (331)
T KOG0374|consen 325 STSKLS 330 (331)
T ss_pred ccccCC
Confidence 888775
No 4
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.6e-75 Score=547.75 Aligned_cols=291 Identities=82% Similarity=1.444 Sum_probs=281.3
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 020757 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (321)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~v 85 (321)
++++|+++++.++...+....++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 67899999998766667788899999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEcCc
Q 020757 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEK 165 (321)
Q Consensus 86 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~ 165 (321)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEee
Q 020757 166 ILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAH 245 (321)
Q Consensus 166 il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH 245 (321)
++|||||++|.+.++++|+.+.||.+.+..+++.|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred eecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEecc
Q 020757 246 QVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKAS 296 (321)
Q Consensus 246 ~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 296 (321)
|++++||+++++++|+||||||||||..+|+||+|.|++++.+.|.+++|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999865
No 5
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.9e-75 Score=546.81 Aligned_cols=292 Identities=60% Similarity=1.139 Sum_probs=280.2
Q ss_pred hHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCce
Q 020757 4 TVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEAN 83 (321)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~ 83 (321)
+.++++|+++++......+....++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++
T Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~ 81 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSN 81 (294)
T ss_pred chHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCccc
Confidence 56789999999977555666778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEc
Q 020757 84 YLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVD 163 (321)
Q Consensus 84 ~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~ 163 (321)
++|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+++..+|+..+|+.+.++|++||++++++
T Consensus 82 ~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 82 YLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEE
Q 020757 164 EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICR 243 (321)
Q Consensus 164 ~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIr 243 (321)
++++|||||++|.+.++++++.++||.+.++.+++.|+|||||.....+|.+++||.|+.||++++++||++||+++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 99999999999999999999999999999999999999999999877899999999999999999999999999999999
Q ss_pred eeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 020757 244 AHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 295 (321)
Q Consensus 244 gH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 295 (321)
|||++++||+++++++|+||||||||||..+|+||+|.|++++.++|.+++.
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999988753
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.8e-74 Score=544.60 Aligned_cols=283 Identities=34% Similarity=0.613 Sum_probs=260.0
Q ss_pred ChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceEEEecCCCCHHHHHHHHHhCC
Q 020757 2 DETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEA----PIKICGDVHGQFSDLLRLFEYGG 77 (321)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~----~i~viGDiHG~~~~L~~il~~~~ 77 (321)
+-+.++.+|+++++.. .|+++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..|
T Consensus 3 ~~~~~~~~i~~~~~~~--------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g 74 (321)
T cd07420 3 TKDHIDALIEAFKEKQ--------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNG 74 (321)
T ss_pred CHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcC
Confidence 4567899999998865 68999999999999999999999999976 89999999999999999999999
Q ss_pred CCC-CceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhc---hhhhhhhcccc
Q 020757 78 YPP-EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN---VRVWKTFTDCF 153 (321)
Q Consensus 78 ~~~-~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~f 153 (321)
+++ .++|||||||||||++|+||+.+|++||+.+|++|++||||||.+.++..|||.+||..+|+ ..+|+.+.++|
T Consensus 75 ~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F 154 (321)
T cd07420 75 LPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVF 154 (321)
T ss_pred CCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHH
Confidence 985 46899999999999999999999999999999999999999999999999999999999997 68999999999
Q ss_pred ccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCC-----CCC----------------------cchhhhhhhcCC
Q 020757 154 NCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVD-----VPD----------------------QGLLCDLLWADP 206 (321)
Q Consensus 154 ~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~-----~~~----------------------~~~~~dlLWsdP 206 (321)
++||+||++++++|||||||++ ..++++|+.+.|+.. .+. .+++.|+|||||
T Consensus 155 ~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP 233 (321)
T cd07420 155 SWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDP 233 (321)
T ss_pred HhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCC
Confidence 9999999999999999999997 468999999887421 011 146789999999
Q ss_pred CCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCC
Q 020757 207 DKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTL 286 (321)
Q Consensus 207 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~ 286 (321)
......|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.+++++
T Consensus 234 ~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~ 313 (321)
T cd07420 234 KAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDL 313 (321)
T ss_pred ccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCC
Confidence 97655577789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEE
Q 020757 287 TCSFQIL 293 (321)
Q Consensus 287 ~~~~~~~ 293 (321)
.+.|.++
T Consensus 314 ~~~f~~~ 320 (321)
T cd07420 314 TPHFVQY 320 (321)
T ss_pred ceeEEEe
Confidence 8888765
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=2.5e-74 Score=537.78 Aligned_cols=283 Identities=52% Similarity=0.994 Sum_probs=272.1
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 020757 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (321)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~v 85 (321)
++++|+++++.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~l 73 (285)
T cd07415 2 LDKWIEQLKKCE--------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYL 73 (285)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 678899998755 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhch-hhhhhhccccccCCeEEEEcC
Q 020757 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV-RVWKTFTDCFNCLPVAALVDE 164 (321)
Q Consensus 86 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPl~~~i~~ 164 (321)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..|+..+|+. .+|+.+.++|++||++|++++
T Consensus 74 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~ 153 (285)
T cd07415 74 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDN 153 (285)
T ss_pred EEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCC
Confidence 9999999999999999999999999999999999999999999999999999999974 899999999999999999999
Q ss_pred cEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEe
Q 020757 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA 244 (321)
Q Consensus 165 ~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrg 244 (321)
+++||||||+|.+.++++|++++||.+.+..+++.|+|||||... .+|.+++||.|+.||++++++||++||+++||||
T Consensus 154 ~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 232 (285)
T cd07415 154 QIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRA 232 (285)
T ss_pred eEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEc
Confidence 999999999999999999999999999999999999999999865 7899999999999999999999999999999999
Q ss_pred eeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEeccc
Q 020757 245 HQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASE 297 (321)
Q Consensus 245 H~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 297 (321)
||++++||++.++++|+|||||||||+..+|+||+|.|++++++.|.+++|.+
T Consensus 233 He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 233 HQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred CccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999999999998764
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.2e-73 Score=536.33 Aligned_cols=286 Identities=47% Similarity=0.942 Sum_probs=272.6
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 020757 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (321)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~v 85 (321)
++++|+++++.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|+
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~l 74 (303)
T PTZ00239 3 IDRHIATLLNGG--------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYI 74 (303)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 788999998765 689999999999999999999999999999999999999999999999999998999999
Q ss_pred EecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhch-hhhhhhccccccCCeEEEEcC
Q 020757 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV-RVWKTFTDCFNCLPVAALVDE 164 (321)
Q Consensus 86 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPl~~~i~~ 164 (321)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|+.++++|++||++|++++
T Consensus 75 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~ 154 (303)
T PTZ00239 75 FIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEG 154 (303)
T ss_pred EeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcC
Confidence 9999999999999999999999999999999999999999999999999999999974 789999999999999999999
Q ss_pred cEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEe
Q 020757 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA 244 (321)
Q Consensus 165 ~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrg 244 (321)
+++||||||+|.+.++++|+.+.||.+.+..+.+.|+|||||.. ..+|.+|+||.|+.||++++++||++||+++||||
T Consensus 155 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 233 (303)
T PTZ00239 155 QILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRA 233 (303)
T ss_pred eEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEc
Confidence 99999999999999999999999999999999999999999985 47899999999999999999999999999999999
Q ss_pred eeecccCeEEecC-CeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEecccccC
Q 020757 245 HQVVEDGYEFFAK-RQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKG 300 (321)
Q Consensus 245 H~~~~~G~~~~~~-~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~ 300 (321)
||++++||++.++ ++|+|||||||||+..+|+||+|.+++++++.|.+++|.+.+.
T Consensus 234 He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~ 290 (303)
T PTZ00239 234 HQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESA 290 (303)
T ss_pred ChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCccc
Confidence 9999999998664 5599999999999999999999999999999999999988764
No 9
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=4.7e-72 Score=520.02 Aligned_cols=270 Identities=58% Similarity=1.067 Sum_probs=262.0
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHH
Q 020757 27 LTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLA 106 (321)
Q Consensus 27 ~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~ 106 (321)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcc
Q 020757 107 YKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNI 186 (321)
Q Consensus 107 lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i 186 (321)
+|+.+|.++++||||||.+.++..|||.+|+..+|+.++|+.+.++|++||++++++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecC
Q 020757 187 ARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSA 266 (321)
Q Consensus 187 ~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa 266 (321)
.||.+.+..+++.|+|||||.....+|.+|+||.++.||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999899999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcEEEEEEcCCCceEEEEEecc
Q 020757 267 PNYCGEFDNAGAMMSVDDTLTCSFQILKAS 296 (321)
Q Consensus 267 ~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 296 (321)
||||+..+|+||++.++++.+++|.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999998899999999999999999988764
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4.2e-72 Score=529.09 Aligned_cols=289 Identities=42% Similarity=0.779 Sum_probs=271.4
Q ss_pred ChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCc----eEEEecCCCCHHHHHHHHHhCC
Q 020757 2 DETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAP----IKICGDVHGQFSDLLRLFEYGG 77 (321)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~----i~viGDiHG~~~~L~~il~~~~ 77 (321)
+.+.++++++++...+ .|+++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..+
T Consensus 12 ~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g 83 (316)
T cd07417 12 TLEFVKEMIEWFKDQK--------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNG 83 (316)
T ss_pred CHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcC
Confidence 4577888999998765 689999999999999999999999999866 9999999999999999999999
Q ss_pred CCCC-ceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccC
Q 020757 78 YPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCL 156 (321)
Q Consensus 78 ~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~L 156 (321)
+++. ++|||||||||||++|+||+.+++++|+.+|.+|++||||||.+.++..|||..|+..+|+..+|..+.++|++|
T Consensus 84 ~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~L 163 (316)
T cd07417 84 LPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWL 163 (316)
T ss_pred CCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhc
Confidence 8755 579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEcCcEEEecCcC-CCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHh
Q 020757 157 PVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQK 235 (321)
Q Consensus 157 Pl~~~i~~~il~vHgGi-~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~ 235 (321)
|++++++++++|||||+ ++...++++++++.|+.+.+..+++.|+|||||... .+|.+++||.|+.||++++++||++
T Consensus 164 Plaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~ 242 (316)
T cd07417 164 PLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEE 242 (316)
T ss_pred hHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHH
Confidence 99999999999999999 456789999999999988888899999999999864 6899999999999999999999999
Q ss_pred CCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcC-CCceEEEEEeccccc
Q 020757 236 HDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDD-TLTCSFQILKASEKK 299 (321)
Q Consensus 236 ~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~~~ 299 (321)
||+++||||||++++||++.++++|+|||||||||+..+|+||+|.|++ ++++.|+++.|.+..
T Consensus 243 n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 243 NNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred cCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 9999999999999999999999999999999999999999999999999 889999999876544
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1e-71 Score=525.00 Aligned_cols=284 Identities=43% Similarity=0.844 Sum_probs=266.4
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 020757 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (321)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~v 85 (321)
++-+++.+++.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++||
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~yl 74 (305)
T cd07416 3 IDVLKAHFMREG--------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYL 74 (305)
T ss_pred HHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 556777887665 589999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEcCc
Q 020757 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEK 165 (321)
Q Consensus 86 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~ 165 (321)
|||||||||++|+|++.+|+++|+.+|.++++||||||.+.++..|||..++..+|+.++|..+.++|++||++++++++
T Consensus 75 FLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~ 154 (305)
T cd07416 75 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQ 154 (305)
T ss_pred EECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCC------CcccC-CCCcccccCHHHHHHHHHhCCC
Q 020757 166 ILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIE------GWGEN-DRGVSYTFGADKVVEFLQKHDL 238 (321)
Q Consensus 166 il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~------~~~~~-~rg~~~~fg~~~~~~fl~~~~~ 238 (321)
++|||||++|.+.++++|+++.|+.+.+..+++.|+|||||..... +|.++ +||.|+.||++++++||++||+
T Consensus 155 i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l 234 (305)
T cd07416 155 FLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNL 234 (305)
T ss_pred EEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCC
Confidence 9999999999999999999999999888899999999999975432 47665 8999999999999999999999
Q ss_pred ceEEEeeeecccCeEEecCC------eEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEecccc
Q 020757 239 DLICRAHQVVEDGYEFFAKR------QLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK 298 (321)
Q Consensus 239 ~~iIrgH~~~~~G~~~~~~~------~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 298 (321)
++||||||++++||++++++ +|+|||||||||+..+|+||+|.++++. ..|.++.+.+.
T Consensus 235 ~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 235 LSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred eEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 99999999999999998876 8999999999999999999999999985 68888877654
No 12
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-72 Score=491.53 Aligned_cols=290 Identities=45% Similarity=0.911 Sum_probs=277.5
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCC
Q 020757 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPP 80 (321)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~ 80 (321)
|-.-++++-|+.+...+ .++++++..||+.++++|..|.++..++.|+.|+|||||++.||.++|+..|--|
T Consensus 1 m~~~d~d~wi~~vk~ck--------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP 72 (306)
T KOG0373|consen 1 MRKMDLDQWIETVKKCK--------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVP 72 (306)
T ss_pred CCcCCHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCC
Confidence 33446778888887777 6999999999999999999999999999999999999999999999999999989
Q ss_pred CceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhc-hhhhhhhccccccCCeE
Q 020757 81 EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLPVA 159 (321)
Q Consensus 81 ~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPl~ 159 (321)
+.+|||+|||||||.+|+|++.+|+.||.+||.++.+||||||.+.+...|||++||..+|+ ...|+...++|+.|+++
T Consensus 73 ~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~Ltla 152 (306)
T KOG0373|consen 73 DTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLA 152 (306)
T ss_pred CcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999996 57999999999999999
Q ss_pred EEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCc
Q 020757 160 ALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLD 239 (321)
Q Consensus 160 ~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~ 239 (321)
|+|+++++|||||+||++.++++|+-+.|..++|..+.++|++||||+. .+.|.-++||+|+.||.+.+++|..-|+++
T Consensus 153 AiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~ 231 (306)
T KOG0373|consen 153 AIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLN 231 (306)
T ss_pred HHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchH
Confidence 9999999999999999999999999999999999999999999999985 789999999999999999999999999999
Q ss_pred eEEEeeeecccCeEEecCCe-EEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEeccccc
Q 020757 240 LICRAHQVVEDGYEFFAKRQ-LVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 299 (321)
Q Consensus 240 ~iIrgH~~~~~G~~~~~~~~-~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 299 (321)
+|.|+||.+++||++.++.| ++|||||||||+...|.|+||.++++++.++++|...+..
T Consensus 232 LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 232 LICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 99999999999999988888 9999999999999999999999999999999999877655
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.4e-70 Score=519.17 Aligned_cols=287 Identities=46% Similarity=0.857 Sum_probs=266.8
Q ss_pred HHHHHHhccCCCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCC-----
Q 020757 9 IIRRLLDAKNGRT--TKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPE----- 81 (321)
Q Consensus 9 ~i~~~~~~~~~~~--~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~----- 81 (321)
+|++++....|+. .....++++++.+||++|+++|++||++++++.|++||||||||+++|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 4788888887765 557789999999999999999999999999999999999999999999999999998754
Q ss_pred ---ceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhch------hhhhhhccc
Q 020757 82 ---ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV------RVWKTFTDC 152 (321)
Q Consensus 82 ---~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~ 152 (321)
.+|||||||||||++|+||+.+++++|+.+|.+|++||||||.+.++..+||..++..+|+. .+|..++++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999998865 689999999
Q ss_pred cccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCC-CCCCcchhhhhhhcCCCCC--CCCcccCC---CCcc--ccc
Q 020757 153 FNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPV-DVPDQGLLCDLLWADPDKD--IEGWGEND---RGVS--YTF 224 (321)
Q Consensus 153 f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~-~~~~~~~~~dlLWsdP~~~--~~~~~~~~---rg~~--~~f 224 (321)
|++||++++++++++|||||++|.+.++++|+.+.||. ..+...++.|+|||||... ..+|.+++ ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999997 4456778999999999864 35677776 9988 699
Q ss_pred CHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 020757 225 GADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 295 (321)
Q Consensus 225 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 295 (321)
|++++++||++||+++||||||++++||++.++++|+|||||||||+..+|+||++.+++++++++.+++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=3.4e-67 Score=502.36 Aligned_cols=294 Identities=33% Similarity=0.615 Sum_probs=256.8
Q ss_pred ChhHHHHHHHHHHhccCCC--CCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CceEEEecCCCCHHHHHHHHHh
Q 020757 2 DETVLDDIIRRLLDAKNGR--TTKQVQLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEY 75 (321)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~----~~i~viGDiHG~~~~L~~il~~ 75 (321)
+.+.++++|+++......- +.....++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 4567888999887653211 122345789999999999999999999999998 7999999999999999999999
Q ss_pred CCCCCC-ceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhch---hhhhhhcc
Q 020757 76 GGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV---RVWKTFTD 151 (321)
Q Consensus 76 ~~~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~ 151 (321)
.++++. ..|||||||||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||..++..+|+. .+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 999865 56999999999999999999999999999999999999999999999999999999999964 69999999
Q ss_pred ccccCCeEEEEcCcEEEecCcCC---------------------------CCCCCHHHHHcccCCC-CCCCcc---hhhh
Q 020757 152 CFNCLPVAALVDEKILCMHGGLS---------------------------PDLKNLDQIRNIARPV-DVPDQG---LLCD 200 (321)
Q Consensus 152 ~f~~LPl~~~i~~~il~vHgGi~---------------------------p~~~~l~~i~~i~r~~-~~~~~~---~~~d 200 (321)
+|++||+++++++++|||||||+ |.+.++++|++++||. +.+..+ ++.|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 99999999999999999999994 4567899999999974 555443 4789
Q ss_pred hhhcCCCCCCCCcccC-CCCcccccCHHHHHHHHHhCCCceEEEeeee------------cccCeEEecC---CeEEEEe
Q 020757 201 LLWADPDKDIEGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQV------------VEDGYEFFAK---RQLVTVF 264 (321)
Q Consensus 201 lLWsdP~~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~------------~~~G~~~~~~---~~~iTif 264 (321)
+|||||... .+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+|||
T Consensus 248 lLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvF 326 (377)
T cd07418 248 VLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLF 326 (377)
T ss_pred eEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEe
Confidence 999999864 566665 7999999999999999999999999999996 6899999876 8999999
Q ss_pred cCCCCC------CCCCCcEEEEEEcCCC--ceEEEEEecc
Q 020757 265 SAPNYC------GEFDNAGAMMSVDDTL--TCSFQILKAS 296 (321)
Q Consensus 265 Sa~~y~------~~~~n~ga~l~i~~~~--~~~~~~~~~~ 296 (321)
|||||| +..+|+||++.++.+. ..+|.+++.+
T Consensus 327 Sa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 327 SAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred cCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 999999 5789999999996644 4566666433
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=8e-66 Score=475.84 Aligned_cols=270 Identities=43% Similarity=0.859 Sum_probs=254.9
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHH
Q 020757 26 QLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLL 105 (321)
Q Consensus 26 ~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~ 105 (321)
.++++..+.|+.++..+|++|+++++++.||.|+|||||+|.||+++|+..|-|...+|+|||||||||..|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHc
Q 020757 106 AYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRN 185 (321)
Q Consensus 106 ~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~ 185 (321)
+||+.||..+++||||||++.+...+.|..||.-+|+.++|++.++.|+.||+||+.++.++|||||+||++.+++||++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcchhhhhhhcCCCCCC------CCcccC-CCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCC
Q 020757 186 IARPVDVPDQGLLCDLLWADPDKDI------EGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKR 258 (321)
Q Consensus 186 i~r~~~~~~~~~~~dlLWsdP~~~~------~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~ 258 (321)
+.|..+.|..+.++|||||||.++. +.|..| .||.++.|...|+++||+.||+-.|||+||.++.||+.+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999998642 234444 799999999999999999999999999999999999987665
Q ss_pred e------EEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEecc
Q 020757 259 Q------LVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKAS 296 (321)
Q Consensus 259 ~------~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 296 (321)
| +|||||||||.+..+|++|||..++++ ..++.|.-+
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFncS 342 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCS 342 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCCC
Confidence 4 899999999999999999999988876 466666443
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-63 Score=442.84 Aligned_cols=285 Identities=49% Similarity=0.947 Sum_probs=270.6
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCceEE
Q 020757 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (321)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~v 85 (321)
++.-|+.|...+ .+++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|+++++..|..++..|+
T Consensus 20 vd~~ie~L~~ck--------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnyl 91 (319)
T KOG0371|consen 20 VDPWIEQLYKCK--------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYL 91 (319)
T ss_pred cccchHHHHhcC--------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCccee
Confidence 344556666655 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHh-chhhhhhhccccccCCeEEEEcC
Q 020757 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF-NVRVWKTFTDCFNCLPVAALVDE 164 (321)
Q Consensus 86 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPl~~~i~~ 164 (321)
|+|||||||++|.|++.+|.++|+.||++|.+||||||.+.+...|||++||.++| ....|+.|.+.|+.+|+.|.|++
T Consensus 92 fmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~ 171 (319)
T KOG0371|consen 92 FMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 171 (319)
T ss_pred eeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999 46799999999999999999999
Q ss_pred cEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEe
Q 020757 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA 244 (321)
Q Consensus 165 ~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrg 244 (321)
++||+|||++|.+.+++.++.+.|..++|.++.++|+|||||.. .-+|..++||.++.||.+..++|-.+||++++-|+
T Consensus 172 ~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRa 250 (319)
T KOG0371|consen 172 KIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRA 250 (319)
T ss_pred ceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHH
Confidence 99999999999999999999999988999999999999999984 57899999999999999999999999999999999
Q ss_pred eeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEeccccc
Q 020757 245 HQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 299 (321)
Q Consensus 245 H~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 299 (321)
||.+.+||.+.+...++|||||||||+...|.+|++.++++....|..|+|++.+
T Consensus 251 hqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k 305 (319)
T KOG0371|consen 251 HQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRK 305 (319)
T ss_pred HHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999995543
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-56 Score=422.15 Aligned_cols=281 Identities=32% Similarity=0.611 Sum_probs=252.2
Q ss_pred hhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CceEEEecCCCCHHHHHHHHHhCCC
Q 020757 3 ETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEYGGY 78 (321)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~~----~~i~viGDiHG~~~~L~~il~~~~~ 78 (321)
..+++.+|+.+...+ .|++..++.|+.+|+++|++.|++-+++ ..|+|+||+||.++||.-+|-+.|+
T Consensus 118 ~~~i~~lieaFk~kq--------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGl 189 (631)
T KOG0377|consen 118 KNHIDLLIEAFKKKQ--------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGL 189 (631)
T ss_pred chHHHHHHHHHHHhh--------hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCC
Confidence 456777888876655 7999999999999999999999999884 4699999999999999999999999
Q ss_pred CCCc-eEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHh---chhhhhhhccccc
Q 020757 79 PPEA-NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF---NVRVWKTFTDCFN 154 (321)
Q Consensus 79 ~~~~-~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~f~ 154 (321)
|..+ .|||.||+||||.+|+|||+.|+++-+.||..+++-|||||+..+|..|||-.|+..+| +.++...+.++|+
T Consensus 190 PS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~ 269 (631)
T KOG0377|consen 190 PSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYR 269 (631)
T ss_pred CCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHH
Confidence 9764 59999999999999999999999999999999999999999999999999999999999 6789999999999
Q ss_pred cCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCC---------CCC-------------CCcchhhhhhhcCCCCCCCC
Q 020757 155 CLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARP---------VDV-------------PDQGLLCDLLWADPDKDIEG 212 (321)
Q Consensus 155 ~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~---------~~~-------------~~~~~~~dlLWsdP~~~~~~ 212 (321)
+||++.++++++|+||||+| +.+.++-+.++.|. ++. .++..+.|+|||||.....+
T Consensus 270 WLPi~tiid~~ilvvHGGiS-d~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC 348 (631)
T KOG0377|consen 270 WLPIGTIIDSRILVVHGGIS-DSTDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGC 348 (631)
T ss_pred hcchhhhcccceEEEecCcc-cchhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCC
Confidence 99999999999999999998 44577777766542 110 02457789999999987777
Q ss_pred cccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEE
Q 020757 213 WGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQI 292 (321)
Q Consensus 213 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~ 292 (321)
|.+.-||.|++||++.+.+||++++++++||+|||.++||++.++++|+|||||+||.....|+||++.+.+.+...|..
T Consensus 349 ~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQ 428 (631)
T KOG0377|consen 349 VPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQ 428 (631)
T ss_pred CcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHH
Confidence 77778999999999999999999999999999999999999999999999999999998899999999999888665543
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5.5e-49 Score=378.45 Aligned_cols=282 Identities=43% Similarity=0.811 Sum_probs=259.0
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceEEEecCCCCHHHHHHHHHhCCCCCC-ceEEEecCccCCCCCcHHH
Q 020757 26 QLTEAEIRQLCAASKEIFLSQPNLLELEA----PIKICGDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIET 100 (321)
Q Consensus 26 ~~~~~~~~~l~~~a~~~l~~ep~~l~~~~----~i~viGDiHG~~~~L~~il~~~~~~~~-~~~vfLGD~VDrG~~s~ev 100 (321)
.++..-+-+|+..+..++++.|++++++. .+.|+||+||++.++.++++..|.|+. ..++|.||+||||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 46667778899999999999999999864 489999999999999999999999865 5699999999999999999
Q ss_pred HHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCC-CCCC
Q 020757 101 ICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSP-DLKN 179 (321)
Q Consensus 101 l~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p-~~~~ 179 (321)
...+++.|+.+|+++|++|||||...++..|||..++..+|..+.+..+.+.|..||++..++++++.+|||+.. .-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999864 4468
Q ss_pred HHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCe
Q 020757 180 LDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQ 259 (321)
Q Consensus 180 l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~ 259 (321)
++++++|.|+...++.+.++++|||||... .|..++.||.|..||+++++.||+.|+++.|||||+..+.||+..++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 999999999988888999999999999864 8899999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCcEEEEEEc-CCCceEEEEEecccccC--cccCCCCC
Q 020757 260 LVTVFSAPNYCGEFDNAGAMMSVD-DTLTCSFQILKASEKKG--KVGFGNNM 308 (321)
Q Consensus 260 ~iTifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~~--~~~~~~~~ 308 (321)
|+|||||||||..++|.||++.++ +++...+..|++.+.-+ .-.|.+.+
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~ma~~ns~ 472 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPMAYANSL 472 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCccccccc
Confidence 999999999999999999999998 67888888898766543 33344433
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.3e-36 Score=273.68 Aligned_cols=214 Identities=49% Similarity=0.836 Sum_probs=176.8
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHH
Q 020757 57 KICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 136 (321)
Q Consensus 57 ~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e 136 (321)
+|||||||++++|.++|+..+..+.+.+||||||||||+.+.+++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988899999999999999999999999998877 8899999999999988766665443
Q ss_pred H---------HHHhchhhhhhhccccccCCeEEEEcC-cEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCC
Q 020757 137 C---------KRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADP 206 (321)
Q Consensus 137 ~---------~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP 206 (321)
. ........+..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345677888899999999999987 99999999999875554443 2234456789999999
Q ss_pred CCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEE
Q 020757 207 DKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMS 281 (321)
Q Consensus 207 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~ 281 (321)
.........+.++. |+++++.|++.++.+.|||||+++..|+.+...++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 85544333344443 999999999999999999999999999876778899999999999876677776653
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=9.4e-27 Score=208.75 Aligned_cols=176 Identities=21% Similarity=0.342 Sum_probs=130.7
Q ss_pred EEEecCCCCHHHHHHHHHhCCC--------CCCceEEEecCccCCCCCcHHHHHHHHHHHhh---ccCCeeEeCCCcccc
Q 020757 57 KICGDVHGQFSDLLRLFEYGGY--------PPEANYLFLGDYVDRGKQSIETICLLLAYKVK---YKENFFLLRGNHECA 125 (321)
Q Consensus 57 ~viGDiHG~~~~L~~il~~~~~--------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---~p~~v~~LrGNHE~~ 125 (321)
+||||||||+++|.++|+.+++ .+.+.+||+||+||||+++.+|+.++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35689999999999999999999999998754 356899999999999
Q ss_pred chhhhccch--HHHHHHhc-----hhhh---hhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCc
Q 020757 126 SINRIYGFY--DECKRRFN-----VRVW---KTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQ 195 (321)
Q Consensus 126 ~~~~~~gf~--~e~~~~~~-----~~~~---~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~ 195 (321)
.++..+.+. ........ ...+ ..+.+|++.+|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 887544332 11111000 1122 34478999999998876 79999999933
Q ss_pred chhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCC
Q 020757 196 GLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAP 267 (321)
Q Consensus 196 ~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~ 267 (321)
+|++.-.... .+.+ -+...++++++.++.+++|+|||+++.|....+++++|+|.++.
T Consensus 140 ------~w~r~y~~~~---~~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKET---SDKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhhh---hhcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 3332210000 0000 01256889999999999999999999887668899999999854
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=9.6e-27 Score=213.64 Aligned_cols=193 Identities=19% Similarity=0.335 Sum_probs=129.9
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC---------CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYP---------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~---------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~ 124 (321)
|+++||||||||++.|.++|+++++. ..+++|||||||||||+|.|||.+++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57999999999999999999998874 46789999999999999999999998774 56689999999999
Q ss_pred cchhhhccc-------hHHHHHHh-------chhhhhhhccccccCCeEEEEc-CcEEEecCcCCCCCCCHHHHHcccCC
Q 020757 125 ASINRIYGF-------YDECKRRF-------NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLKNLDQIRNIARP 189 (321)
Q Consensus 125 ~~~~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPl~~~i~-~~il~vHgGi~p~~~~l~~i~~i~r~ 189 (321)
+.++...+- ..+....| ...+++.+.++++++|++..++ ++++|||||+.|.... ++
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~--------~~ 150 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIG--------RQ 150 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcc--------cc
Confidence 877543220 11111222 1235677889999999998774 5799999999875311 00
Q ss_pred CCCCCcchhhhhhhcCCCCC--------CCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEE
Q 020757 190 VDVPDQGLLCDLLWADPDKD--------IEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLV 261 (321)
Q Consensus 190 ~~~~~~~~~~dlLWsdP~~~--------~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~i 261 (321)
.......++|++-... ...|..+. .|...+|.||+++...... +..+
T Consensus 151 ----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~~---~~~i 205 (245)
T PRK13625 151 ----DKKVQTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRFV---NHTV 205 (245)
T ss_pred ----hhhhhhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCccceec---CCeE
Confidence 0112235566542211 01111111 2456799999998754322 3467
Q ss_pred EEecCCCCCCCCCCcEEEEEEcCC
Q 020757 262 TVFSAPNYCGEFDNAGAMMSVDDT 285 (321)
Q Consensus 262 TifSa~~y~~~~~n~ga~l~i~~~ 285 (321)
-|-+..-|. +.=+.+.+.+.
T Consensus 206 ~IDtGa~~g----G~Ltal~l~~~ 225 (245)
T PRK13625 206 NIDTGCVFG----GRLTALRYPEM 225 (245)
T ss_pred EEECcCccC----CEEEEEECCCC
Confidence 788876552 23334555544
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.93 E-value=8.6e-25 Score=203.49 Aligned_cols=218 Identities=17% Similarity=0.314 Sum_probs=144.5
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhcc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 132 (321)
|+++||||||||+++|.++|+.+++. ..+.++||||+|||||+|.||+.++.++ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 67999999999999999999999874 5688999999999999999999999876 457999999999988776555
Q ss_pred ch-----HHHHHHhchhhhhhhccccccCCeEEEE-cCcEEEecCcCCCCCCCHHHHHccc----CCCCCCC-cchhhhh
Q 020757 133 FY-----DECKRRFNVRVWKTFTDCFNCLPVAALV-DEKILCMHGGLSPDLKNLDQIRNIA----RPVDVPD-QGLLCDL 201 (321)
Q Consensus 133 f~-----~e~~~~~~~~~~~~~~~~f~~LPl~~~i-~~~il~vHgGi~p~~~~l~~i~~i~----r~~~~~~-~~~~~dl 201 (321)
.. +.+.........+.+.+|++.+|+...+ ++++++||||++|.+ ++++..... ..+..++ ...+..+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~-~~~~~~~~a~eve~~l~~~~~~~~~~~m 155 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW-DLATALALAREVEAVLRSDDYRDFLANM 155 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcHHHHHHHh
Confidence 43 1222222334456688999999998776 568999999999987 444322211 1111122 2345555
Q ss_pred hhcCCCCCCCCcccCCCCc-ccccCHHHHHH--HHHhC-----------------------------CCceEEEeeeecc
Q 020757 202 LWADPDKDIEGWGENDRGV-SYTFGADKVVE--FLQKH-----------------------------DLDLICRAHQVVE 249 (321)
Q Consensus 202 LWsdP~~~~~~~~~~~rg~-~~~fg~~~~~~--fl~~~-----------------------------~~~~iIrgH~~~~ 249 (321)
.|+.|. .|.++-.|. ...|.-.++.+ ||... .-..||-||.+..
T Consensus 156 y~~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l 231 (275)
T PRK00166 156 YGNEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAAL 231 (275)
T ss_pred cCCCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCccc
Confidence 555553 244333332 11121122111 22222 2347999999998
Q ss_pred cCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCC
Q 020757 250 DGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTL 286 (321)
Q Consensus 250 ~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~ 286 (321)
.|... ...++.+-|.--+. +.=..+.++...
T Consensus 232 ~G~~~--~~~~~~LDtGcvwg----g~Lta~~l~~~~ 262 (275)
T PRK00166 232 EGLTT--PPNIIALDTGCVWG----GKLTALRLEDKQ 262 (275)
T ss_pred CCccC--CCCeEEeecccccC----CeEEEEEeCCCc
Confidence 78765 45688888876553 333456666443
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.92 E-value=1.1e-24 Score=197.25 Aligned_cols=115 Identities=25% Similarity=0.425 Sum_probs=91.3
Q ss_pred EEEecCCCCHHHHHHHHHhCCCC--------CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchh
Q 020757 57 KICGDVHGQFSDLLRLFEYGGYP--------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN 128 (321)
Q Consensus 57 ~viGDiHG~~~~L~~il~~~~~~--------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~ 128 (321)
+||||||||++.|.++|+.+++. +.+++|||||||||||+|.+|+.+++.++ .+.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 69999999999999999998775 46799999999999999999999998875 345899999999998774
Q ss_pred hhcc------ch-----------HHHHHHhc--hhhhhhhccccccCCeEEEEcCcEEEecCcCC
Q 020757 129 RIYG------FY-----------DECKRRFN--VRVWKTFTDCFNCLPVAALVDEKILCMHGGLS 174 (321)
Q Consensus 129 ~~~g------f~-----------~e~~~~~~--~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~ 174 (321)
...+ +. .+..+.+. .+.++.+.+|+++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 3211 00 11222221 34567788999999999775 58999999986
No 24
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=2.4e-24 Score=196.40 Aligned_cols=121 Identities=26% Similarity=0.511 Sum_probs=96.9
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCC----------CceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCcc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYPP----------EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHE 123 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~~----------~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE 123 (321)
||+.||||||||+++|.++|+.+++.+ .+++||||||||||++|.||+.+|++++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 689999999999999999999998753 46899999999999999999999988863 457999999999
Q ss_pred ccchhhhc--------cchHHHHHHh---chhhhhhhccccccCCeEEEEc-CcEEEecCcCCCCC
Q 020757 124 CASINRIY--------GFYDECKRRF---NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDL 177 (321)
Q Consensus 124 ~~~~~~~~--------gf~~e~~~~~---~~~~~~~~~~~f~~LPl~~~i~-~~il~vHgGi~p~~ 177 (321)
.+.++... |+.. ....+ ...+.+.+.+||+.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEE-TVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccc-hHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 98776432 2222 11222 2356677889999999998775 47999999988643
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=1.9e-24 Score=199.27 Aligned_cols=125 Identities=24% Similarity=0.397 Sum_probs=102.0
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCC-CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccch
Q 020757 56 IKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (321)
Q Consensus 56 i~viGDiHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 134 (321)
++||||||||+++|+++|+.+++. +.+.++|+||||||||+|+||+.++.+++ .++++|+||||.+.+...+++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999886 57899999999999999999999998875 5899999999999887655543
Q ss_pred -----HHHHHHhchhhhhhhccccccCCeEEEEcC-cEEEecCcCCCCCCCHHHHHc
Q 020757 135 -----DECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRN 185 (321)
Q Consensus 135 -----~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgGi~p~~~~l~~i~~ 185 (321)
+...........+.+.+|+.++|+...+++ ++++||||++|.+ ++++...
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~~~~ 132 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQALK 132 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHHHHH
Confidence 122222233445678899999999988765 8999999999988 5555443
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=2.5e-24 Score=199.26 Aligned_cols=127 Identities=20% Similarity=0.373 Sum_probs=105.4
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhcc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 132 (321)
|.++||||||||+++|.++|+++++. ..++++|+||+|||||+|+||+.++.++ +.++++|+||||.+.+...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcC
Confidence 57899999999999999999999976 4689999999999999999999999876 346889999999998887766
Q ss_pred c-----hHHHHHHhchhhhhhhccccccCCeEEEEc-CcEEEecCcCCCCCCCHHHHHc
Q 020757 133 F-----YDECKRRFNVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLKNLDQIRN 185 (321)
Q Consensus 133 f-----~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~-~~il~vHgGi~p~~~~l~~i~~ 185 (321)
+ .+.....+.....+.+.+|+..+|+....+ .++++||||++|.+ ++++...
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~a~~ 134 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQTAKE 134 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHHHHH
Confidence 5 233334445567788899999999997654 36999999999998 5655443
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.90 E-value=2.2e-23 Score=188.22 Aligned_cols=177 Identities=21% Similarity=0.273 Sum_probs=117.2
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhcc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 132 (321)
++++||||||||+++|.++|+.+++. ..++++||||+|||||+|.|||.++.. .++++|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 58999999999999999999999886 578999999999999999999999853 26889999999988864322
Q ss_pred chHHH--------HHHh---chhhhhhhccccccCCeEEEEc---CcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchh
Q 020757 133 FYDEC--------KRRF---NVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLL 198 (321)
Q Consensus 133 f~~e~--------~~~~---~~~~~~~~~~~f~~LPl~~~i~---~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~ 198 (321)
-.... ...+ ..+.+..+.+++++||+...+. +++++||||++... .+.. .+. ..
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~--~~~~----~~~------~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV--YEWQ----KDV------DL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc--hhhh----ccC------Cc
Confidence 10000 0111 1123455668999999997653 47999999984321 1100 100 12
Q ss_pred hhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCC
Q 020757 199 CDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNY 269 (321)
Q Consensus 199 ~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y 269 (321)
.+++|+++... ..+. .+ ...+.+.+|.||++++.-.. .+..+-|-+.+-|
T Consensus 159 ~~~~w~r~~~~-~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 159 HQVLWSRSRLG-ERQK--GQ---------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred cceEEcChhhh-hccc--cc---------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 35688765311 0000 00 11245679999999875432 2335667766655
No 28
>PHA02239 putative protein phosphatase
Probab=99.89 E-value=9.6e-23 Score=185.90 Aligned_cols=174 Identities=21% Similarity=0.309 Sum_probs=120.7
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC--CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIY 131 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~ 131 (321)
|++++||||||+++.|.++++.+... +.+.+||+|||||||++|.+++..++.+. ..+.++++|+||||.+.+....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987543 46889999999999999999999998875 3466899999999998664221
Q ss_pred c-----ch---------HHHHHHhc-------------------------------hhhhhhhccccccCCeEEEEcCcE
Q 020757 132 G-----FY---------DECKRRFN-------------------------------VRVWKTFTDCFNCLPVAALVDEKI 166 (321)
Q Consensus 132 g-----f~---------~e~~~~~~-------------------------------~~~~~~~~~~f~~LPl~~~i~~~i 166 (321)
+ .. .+....|+ ...+..+..|++.||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 1 00 01112221 01234455688999999775 589
Q ss_pred EEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeee
Q 020757 167 LCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQ 246 (321)
Q Consensus 167 l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~ 246 (321)
+|||||+.|... +++. ...+++|.+. . .+.. .=+.||.||+
T Consensus 159 ifVHAGi~p~~~-~~~q-------------~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHT 199 (235)
T PHA02239 159 IFSHSGGVSWKP-VEEQ-------------TIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHT 199 (235)
T ss_pred EEEeCCCCCCCC-hhhC-------------CHhHeEEecc-c-----CCCC-------------------CCcEEEECCC
Confidence 999999988642 3321 2368999985 2 1111 1136899999
Q ss_pred ecccCeEEecCCeEEEEecCCCC
Q 020757 247 VVEDGYEFFAKRQLVTVFSAPNY 269 (321)
Q Consensus 247 ~~~~G~~~~~~~~~iTifSa~~y 269 (321)
++..+..... ++.|.|-+..-|
T Consensus 200 p~~~~~~~~~-~~~I~IDtGa~~ 221 (235)
T PHA02239 200 PTDSGEVEIN-GDMLMCDVGAVF 221 (235)
T ss_pred CCCCCccccc-CCEEEeecCccc
Confidence 9976643332 345777776533
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=3.6e-22 Score=178.72 Aligned_cols=180 Identities=21% Similarity=0.284 Sum_probs=120.2
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhcc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 132 (321)
++++|||||||++.+|.++++..++. ..+.++|+|||||||+++.|++.++.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47899999999999999999998875 468899999999999999999988853 36899999999998875543
Q ss_pred c--hHHHHHHhc---------hhhhhhhccccccCCeEEEEc---CcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchh
Q 020757 133 F--YDECKRRFN---------VRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLL 198 (321)
Q Consensus 133 f--~~e~~~~~~---------~~~~~~~~~~f~~LPl~~~i~---~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~ 198 (321)
- ..+.....+ .+.++.+.+|+++||+...++ .++++||||+++.. ..+.+.. +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~-~~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD-WSDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch-hhhhhhc-----cccCcccc
Confidence 1 112211221 124556778999999998775 36999999986543 1111110 01122334
Q ss_pred hhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCC
Q 020757 199 CDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAP 267 (321)
Q Consensus 199 ~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~ 267 (321)
.+++|+++...... +...-+.+.||.||++.+..+.. ++ .+-|-+.+
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~~~--~~-~i~ID~Gs 195 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPLRL--GN-VLYIDTGA 195 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcceEE--CC-EEEEECCC
Confidence 67889876421100 00011456799999998754432 33 34454444
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.88 E-value=3.7e-22 Score=185.34 Aligned_cols=74 Identities=32% Similarity=0.472 Sum_probs=64.1
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCC------CCceEEEecCccCCCCCcHHHHHHHHHHHhhccC-CeeEeCCCccccch
Q 020757 55 PIKICGDVHGQFSDLLRLFEYGGYP------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKE-NFFLLRGNHECASI 127 (321)
Q Consensus 55 ~i~viGDiHG~~~~L~~il~~~~~~------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~-~v~~LrGNHE~~~~ 127 (321)
++++||||||+++.|.++|+.+... ..+.+|||||||||||+|.+|+.+|++++..+|. ++++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999865421 2457999999999999999999999999988876 68999999998755
Q ss_pred h
Q 020757 128 N 128 (321)
Q Consensus 128 ~ 128 (321)
.
T Consensus 83 ~ 83 (304)
T cd07421 83 A 83 (304)
T ss_pred h
Confidence 3
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.85 E-value=4.2e-21 Score=173.35 Aligned_cols=115 Identities=22% Similarity=0.299 Sum_probs=85.8
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhcc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 132 (321)
.+++||||||||+++|+++|+...+. ..+.++||||||||||+|.||+.+|.+ .+++.||||||.+.+....+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998864 568899999999999999999998852 37899999999988754311
Q ss_pred ch-H-------HHHHHhch---hhhhhhccccccCCeEEEEc---CcEEEecCcCC
Q 020757 133 FY-D-------ECKRRFNV---RVWKTFTDCFNCLPVAALVD---EKILCMHGGLS 174 (321)
Q Consensus 133 f~-~-------e~~~~~~~---~~~~~~~~~f~~LPl~~~i~---~~il~vHgGi~ 174 (321)
-. . +....+.. ........++++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 0 00011111 12233456899999997664 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.43 E-value=9.1e-13 Score=109.07 Aligned_cols=159 Identities=25% Similarity=0.290 Sum_probs=100.9
Q ss_pred CceEEEecCCCCHHHH----HHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHH--HHHHhhccCCeeEeCCCccccch
Q 020757 54 APIKICGDVHGQFSDL----LRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLL--LAYKVKYKENFFLLRGNHECASI 127 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L----~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll--~~lk~~~p~~v~~LrGNHE~~~~ 127 (321)
++|+++||+|+..... ..+.......+.+.+|++||++|++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 5799999999999987 34444444456688999999999999988776654 55556677899999999999876
Q ss_pred hhhccchHHHHHHh----------------------------------chhhhhhhccccccCCeEEEEcCcEEEecCcC
Q 020757 128 NRIYGFYDECKRRF----------------------------------NVRVWKTFTDCFNCLPVAALVDEKILCMHGGL 173 (321)
Q Consensus 128 ~~~~gf~~e~~~~~----------------------------------~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi 173 (321)
...+.......... ..........+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 54332222111100 00001111111122222333345788899988
Q ss_pred CCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeec
Q 020757 174 SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVV 248 (321)
Q Consensus 174 ~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~ 248 (321)
.+........ .....+.+.+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7543211110 12346678899999999999999999854
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.27 E-value=2.1e-10 Score=97.41 Aligned_cols=83 Identities=27% Similarity=0.365 Sum_probs=62.5
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccch
Q 020757 55 PIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (321)
Q Consensus 55 ~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 134 (321)
++.++||+||+...+.++++.... .+.++++||++++++.+. + .....++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 478999999999999999998654 688999999999998765 1 124469999999998532
Q ss_pred HHHHHHhchhhhhhhccccccCCeEEEE--c-CcEEEecCcCC
Q 020757 135 DECKRRFNVRVWKTFTDCFNCLPVAALV--D-EKILCMHGGLS 174 (321)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~f~~LPl~~~i--~-~~il~vHgGi~ 174 (321)
+..+|....+ + .+++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 2345544333 2 37999999654
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.25 E-value=1.5e-10 Score=97.50 Aligned_cols=152 Identities=20% Similarity=0.291 Sum_probs=92.3
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF 133 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf 133 (321)
|+++++||+|++..++.++++.+ ...+.++++||++++ .+++..+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999987 346788999999993 6666666433 69999999996543221110
Q ss_pred hHHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCc
Q 020757 134 YDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGW 213 (321)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~ 213 (321)
+. +...... ..-..+++++||....
T Consensus 69 ----------~~------~~~~~~~-~~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 ----------EY------LLDALRL-TIDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp ----------CS------SHSEEEE-EETTEEEEEESSTSSS--------------------------------------
T ss_pred ----------cc------cccceee-eecCCeEEEECCCCcc--------------------------------------
Confidence 00 1111111 1224489999996543
Q ss_pred ccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEc
Q 020757 214 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVD 283 (321)
Q Consensus 214 ~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~ 283 (321)
...+.+.+.+.+...++++++.||.-.+.-.+ ..+..+++.-|...... +...+++.++
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~~--~~~~~~~i~~ 152 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPRH--GDQSGYAILD 152 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-SS--SSSEEEEEEE
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCCC--CCCCEEEEEE
Confidence 01344567777889999999999998754433 34445555555433221 2255555543
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.14 E-value=1.4e-09 Score=92.92 Aligned_cols=63 Identities=17% Similarity=0.150 Sum_probs=48.8
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
|++.++||+||++.++..+++..... +.+.++++||++ +.+++..+..+ ...++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 68999999999998877766655554 568899999998 45676666443 23599999999983
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=99.13 E-value=2e-10 Score=100.62 Aligned_cols=69 Identities=22% Similarity=0.331 Sum_probs=55.2
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCC--------cHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ--------SIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~--------s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
|++.++||+||++.++.++++.+...+.+.++++||++|+|++ +.+++..+..+ ...+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 6899999999999999999887755567899999999999874 45566555432 34799999999975
Q ss_pred c
Q 020757 126 S 126 (321)
Q Consensus 126 ~ 126 (321)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.02 E-value=2.8e-09 Score=88.72 Aligned_cols=118 Identities=21% Similarity=0.241 Sum_probs=79.1
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcH--HHHHHHHHHHhhccCCeeEeCCCccccchhhhcc
Q 020757 55 PIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--ETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (321)
Q Consensus 55 ~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~--evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 132 (321)
++.++||+||++. .....+.+.++++||+++++..+- +.+.++..++ . ..++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 4789999999987 122345688999999999886432 2333333221 1 236789999996421
Q ss_pred chHHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCC
Q 020757 133 FYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEG 212 (321)
Q Consensus 133 f~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~ 212 (321)
.-+.+++++||.+.+.. +..+ +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~----------------------~~~~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL----------------------DLVS--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc----------------------cccc--c------
Confidence 12447899999542210 0000 0
Q ss_pred cccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeE
Q 020757 213 WGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 253 (321)
Q Consensus 213 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 253 (321)
....|.+.+.+++++.+.+.++-||.-.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123677889999999999999999999988876
No 38
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.99 E-value=7.4e-10 Score=91.43 Aligned_cols=143 Identities=41% Similarity=0.682 Sum_probs=116.8
Q ss_pred hhhhccchHHHHHHhchh-hhhh---hccccccCCeEEEEcC-cEEEecCcCCCCC-CCHHHHHcccCCC--CCCCcchh
Q 020757 127 INRIYGFYDECKRRFNVR-VWKT---FTDCFNCLPVAALVDE-KILCMHGGLSPDL-KNLDQIRNIARPV--DVPDQGLL 198 (321)
Q Consensus 127 ~~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPl~~~i~~-~il~vHgGi~p~~-~~l~~i~~i~r~~--~~~~~~~~ 198 (321)
+...+++..++...++.. .|.. ..++|+.+|+.++++. .++|.|+++++.. ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 345567777766666554 5666 8999999999999888 9999999999965 6777777777655 55566667
Q ss_pred hhhhhcCCCCC-CCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCC
Q 020757 199 CDLLWADPDKD-IEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYC 270 (321)
Q Consensus 199 ~dlLWsdP~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~ 270 (321)
.+.+|+++... ...|.++++|.+..| .+....|+..+..+.+.++|+.+..++...+.+..+|.||+++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 77799999863 678999999988777 788889998888888999999999999888776899999999986
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.91 E-value=1.4e-08 Score=92.15 Aligned_cols=72 Identities=10% Similarity=0.179 Sum_probs=57.9
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 53 ~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
.+++.++||+||++..+.++++.....+.+.+|++||++++|+..-++..++..+. ..+..++.++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 36799999999999999999987654566889999999999976766666665553 2234799999999975
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.90 E-value=8.3e-09 Score=94.20 Aligned_cols=156 Identities=20% Similarity=0.229 Sum_probs=93.7
Q ss_pred ceEEEecCCCCHHHHH-HHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhh---
Q 020757 55 PIKICGDVHGQFSDLL-RLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRI--- 130 (321)
Q Consensus 55 ~i~viGDiHG~~~~L~-~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~--- 130 (321)
+|+++|||||++.... +.++.. ..+.++++||+++ .+.+++..|..+ +..++.++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987643 344432 3478999999986 456766665544 3468999999998653210
Q ss_pred c-----------------c----------------c---------hHHHHHHhc-hhhhhhhccccccCCeEEEEcCcEE
Q 020757 131 Y-----------------G----------------F---------YDECKRRFN-VRVWKTFTDCFNCLPVAALVDEKIL 167 (321)
Q Consensus 131 ~-----------------g----------------f---------~~e~~~~~~-~~~~~~~~~~f~~LPl~~~i~~~il 167 (321)
+ + | ..++...|+ ...++++...++.++.+......||
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 0 0 124555553 2344556666777754433344799
Q ss_pred EecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCC----CceEEE
Q 020757 168 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHD----LDLICR 243 (321)
Q Consensus 168 ~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~----~~~iIr 243 (321)
+.|++++-.. ++.+ +|+ ...|.+. +..+|...+.+.++... .++++-
T Consensus 152 iaH~~~~G~g---~~~~--------------------~~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLG---SDAE--------------------DPC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCC---cccc--------------------ccc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 9999886432 1111 111 0122221 12467777777666554 799999
Q ss_pred eeeecc
Q 020757 244 AHQVVE 249 (321)
Q Consensus 244 gH~~~~ 249 (321)
||--..
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 996543
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.85 E-value=3.7e-08 Score=78.97 Aligned_cols=118 Identities=26% Similarity=0.390 Sum_probs=85.2
Q ss_pred EEEecCCCCHHHHHHHH--HhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccch
Q 020757 57 KICGDVHGQFSDLLRLF--EYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (321)
Q Consensus 57 ~viGDiHG~~~~L~~il--~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 134 (321)
+++||+|+......... ........+.++++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888765 33333456788999999999988877655533344456678999999999
Q ss_pred HHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcc
Q 020757 135 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 214 (321)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~ 214 (321)
++++|+.+.+...... +..
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~---------------------~~~--------- 88 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELS---------------------PDE--------- 88 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhc---------------------ccc---------
Confidence 8999998765321000 000
Q ss_pred cCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEE
Q 020757 215 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEF 254 (321)
Q Consensus 215 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~ 254 (321)
......+...+.+.+...+|.||.-....+..
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 00567788889999999999999998666543
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.75 E-value=9.3e-08 Score=82.89 Aligned_cols=66 Identities=23% Similarity=0.263 Sum_probs=46.7
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCc-HHHHHHHHHHHhhccCCeeEeCCCccccch
Q 020757 56 IKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS-IETICLLLAYKVKYKENFFLLRGNHECASI 127 (321)
Q Consensus 56 i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s-~evl~ll~~lk~~~p~~v~~LrGNHE~~~~ 127 (321)
|.++||+||++..+.. ......+.+.+|+.||++++|... .+.+..+. ..+..++.+.||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHHH
Confidence 5789999999998876 222334558899999999998763 33332222 234569999999997543
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.74 E-value=7.6e-07 Score=77.99 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=42.2
Q ss_pred ceEEEecCC-CCHH-----HHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 55 PIKICGDVH-GQFS-----DLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 55 ~i~viGDiH-G~~~-----~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
.|.||||+| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+ ...++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~----~~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTI----APDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhh----CCceEEEECCCCcc
Confidence 378999999 6533 35555543 34578999999987 6676666544 22589999999974
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.67 E-value=9e-08 Score=82.20 Aligned_cols=67 Identities=27% Similarity=0.263 Sum_probs=47.8
Q ss_pred eEEEecCCCCHHHHHHHH-HhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 56 IKICGDVHGQFSDLLRLF-EYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 56 i~viGDiHG~~~~L~~il-~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
+.++||+|++...+...+ +.......+.++++||+++++....... ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 468999999988776655 2233345578899999999987665543 221 223456799999999986
No 45
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.66 E-value=8.2e-07 Score=81.23 Aligned_cols=207 Identities=16% Similarity=0.209 Sum_probs=103.6
Q ss_pred CceEEEecCCCC------HHHHHHHHHhCCCCCCceEEEecCccCC--C-----CCcHHHHHHHHHHHhhccCCeeEeCC
Q 020757 54 APIKICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDR--G-----KQSIETICLLLAYKVKYKENFFLLRG 120 (321)
Q Consensus 54 ~~i~viGDiHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDr--G-----~~s~evl~ll~~lk~~~p~~v~~LrG 120 (321)
|++++++|+|.. ...+.+.|+... ...+.++++||++|. | +...+++.+|..++. .+..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 689999999954 234555554321 345789999999985 2 234566666665642 2357999999
Q ss_pred CccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEc-CcEEEecCcCCCCCC-CHHHHHcccC-CCC-----C
Q 020757 121 NHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLK-NLDQIRNIAR-PVD-----V 192 (321)
Q Consensus 121 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~-~~il~vHgGi~p~~~-~l~~i~~i~r-~~~-----~ 192 (321)
|||..... ...+..+. ..+.. |....++ .+++++||-..+.-. .-....++-| |.. .
T Consensus 79 NHD~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~ 143 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLA 143 (241)
T ss_pred CCchhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHh
Confidence 99974321 11111111 11211 2222333 469999997654211 1111222222 100 0
Q ss_pred CCcchhhhhh--hcCCCCCCCCcccCC-CC-cccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCC
Q 020757 193 PDQGLLCDLL--WADPDKDIEGWGEND-RG-VSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPN 268 (321)
Q Consensus 193 ~~~~~~~dlL--WsdP~~~~~~~~~~~-rg-~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~ 268 (321)
........+- |+.-+. ..+. +. .-....++++.+.+++.+++.+|.||.-.+.=.....++.-++-.+-++
T Consensus 144 ~p~~~~~~ia~~~~~~s~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgd 218 (241)
T PRK05340 144 LPLSIRLRIAAKMRAKSK-----AANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGD 218 (241)
T ss_pred CCHHHHHHHHHHHHHHHH-----HhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCC
Confidence 0000000000 000000 0000 11 1122356788899999999999999998754343333331112122222
Q ss_pred CCCCCCCcEEEEEEcCCC
Q 020757 269 YCGEFDNAGAMMSVDDTL 286 (321)
Q Consensus 269 y~~~~~n~ga~l~i~~~~ 286 (321)
. ...+.++.++.+.
T Consensus 219 w----~~~~~~~~~~~~~ 232 (241)
T PRK05340 219 W----HEQGSVLKVDADG 232 (241)
T ss_pred C----CCCCeEEEEECCc
Confidence 2 2337778887764
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.56 E-value=9e-07 Score=73.42 Aligned_cols=107 Identities=17% Similarity=0.201 Sum_probs=74.5
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHH
Q 020757 57 KICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 136 (321)
Q Consensus 57 ~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e 136 (321)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..+ ....++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 3899999998877776664 35668899999973 3445555443 1335899999999
Q ss_pred HHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcccC
Q 020757 137 CKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGEN 216 (321)
Q Consensus 137 ~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~~~ 216 (321)
-+++++|+-+.+.. . .+.
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-~------------------------~~~---------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-D------------------------GED---------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-C------------------------ccc----------
Confidence 47899998321100 0 000
Q ss_pred CCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeE
Q 020757 217 DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 253 (321)
Q Consensus 217 ~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 253 (321)
...-|.+++.+++++.+.+.++.||.-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356788899999999999999999877665
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.54 E-value=1.7e-06 Score=78.68 Aligned_cols=205 Identities=15% Similarity=0.157 Sum_probs=99.9
Q ss_pred eEEEecCCCCH------HHHHHHHHhCCCCCCceEEEecCccCCC-----CC--cHHHHHHHHHHHhhccCCeeEeCCCc
Q 020757 56 IKICGDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDRG-----KQ--SIETICLLLAYKVKYKENFFLLRGNH 122 (321)
Q Consensus 56 i~viGDiHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDrG-----~~--s~evl~ll~~lk~~~p~~v~~LrGNH 122 (321)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..++. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 234455544321 457889999999952 11 1244455555542 245799999999
Q ss_pred cccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEE-cCcEEEecCcCCCC-CCCHHHHHcccC-CC------CCC
Q 020757 123 ECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALV-DEKILCMHGGLSPD-LKNLDQIRNIAR-PV------DVP 193 (321)
Q Consensus 123 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i-~~~il~vHgGi~p~-~~~l~~i~~i~r-~~------~~~ 193 (321)
|...-. ...+..+ ..++.. +....+ +.+++++||-.-.. -....-..++.| |. ..+
T Consensus 79 D~~~~~-------~~~~~~g-------i~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAG-------MTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCC-------CEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 1111111 112222 222222 45899999965321 011111122211 10 000
Q ss_pred --CcchhhhhhhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCC
Q 020757 194 --DQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCG 271 (321)
Q Consensus 194 --~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~ 271 (321)
....+...+|+..... . ......-....+.++++.+++.+++++|.||+-.+.-+.+..++.-.+-.+-.+..
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0111223333322110 0 00000112235678899999999999999999876544443233222333333331
Q ss_pred CCCCcEEEEEEcCC
Q 020757 272 EFDNAGAMMSVDDT 285 (321)
Q Consensus 272 ~~~n~ga~l~i~~~ 285 (321)
..+.++.++++
T Consensus 219 ---~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ---RQGSILRVDAD 229 (231)
T ss_pred ---cCCeEEEEcCC
Confidence 23556666654
No 48
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.45 E-value=4.3e-06 Score=69.80 Aligned_cols=118 Identities=24% Similarity=0.261 Sum_probs=74.0
Q ss_pred eEEEecCCCCHH------H----HHHHHHhCCCCCCceEEEecCccCCCCCc-H-HHHHHHHHHHhhccCCeeEeCCCcc
Q 020757 56 IKICGDVHGQFS------D----LLRLFEYGGYPPEANYLFLGDYVDRGKQS-I-ETICLLLAYKVKYKENFFLLRGNHE 123 (321)
Q Consensus 56 i~viGDiHG~~~------~----L~~il~~~~~~~~~~~vfLGD~VDrG~~s-~-evl~ll~~lk~~~p~~v~~LrGNHE 123 (321)
|+.++|+|=... . |.++++...-...+.++++||+++.|... . +...++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899994211 1 22244444334568899999999998742 1 2223333332111 37999999999
Q ss_pred ccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhh
Q 020757 124 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLW 203 (321)
Q Consensus 124 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLW 203 (321)
. ++++|..+.+....
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~------------------------ 94 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS------------------------ 94 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc------------------------
Confidence 7 88899866432100
Q ss_pred cCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEE
Q 020757 204 ADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEF 254 (321)
Q Consensus 204 sdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~ 254 (321)
+... . -+.+++.+++++.++++++.||.-.+..+.+
T Consensus 95 ---------~~~~-----~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 95 ---------GRER-----L-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred ---------cccc-----C-CCHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 0000 0 1567789999999999999999998665543
No 49
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.35 E-value=2.4e-05 Score=68.23 Aligned_cols=159 Identities=18% Similarity=0.135 Sum_probs=96.3
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccc
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF 133 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf 133 (321)
|++.|+||.||...+..+..+.....+.+.+|.+||++....... +.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~~--l~~------~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLDA--LEG------GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchHH--hhc------ccccceEEEEccCCCcccc-----
Confidence 789999999999976666666655566788999999997654321 110 0246899999999986432
Q ss_pred hHHHHHHhchhhhhhhccccccCCeEE--EEc-CcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCC
Q 020757 134 YDECKRRFNVRVWKTFTDCFNCLPVAA--LVD-EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI 210 (321)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~f~~LPl~~--~i~-~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~ 210 (321)
..+|... .++ .+++++||.... .
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~-~--------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYF-V--------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCccc-c---------------------------------
Confidence 1222222 223 589999996532 1
Q ss_pred CCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCC-CceE
Q 020757 211 EGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDT-LTCS 289 (321)
Q Consensus 211 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~-~~~~ 289 (321)
......++.+-+..+++.+|.||+-.+. ++...+-.++-=-|.+.+-+ .+..+++.++.+ .++.
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~-~~~~~~i~~vNPGS~s~pr~--~~~~sy~il~~~~~~~~ 159 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPV-AEKVGGILLVNPGSVSGPRG--GNPASYAILDVDNLEVE 159 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCccc-EEEECCEEEEcCCCcCCCCC--CCCcEEEEEEcCCCEEE
Confidence 0223456666777889999999998753 33322211222234444433 244455666544 4455
Q ss_pred EEEEe
Q 020757 290 FQILK 294 (321)
Q Consensus 290 ~~~~~ 294 (321)
...++
T Consensus 160 ~~~~~ 164 (172)
T COG0622 160 VLFLE 164 (172)
T ss_pred EEEee
Confidence 54443
No 50
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.24 E-value=3.7e-05 Score=69.19 Aligned_cols=70 Identities=21% Similarity=0.155 Sum_probs=42.4
Q ss_pred ceEEEecCCC----CHHHH----HHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhh--ccCCeeEeCCCccc
Q 020757 55 PIKICGDVHG----QFSDL----LRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVK--YKENFFLLRGNHEC 124 (321)
Q Consensus 55 ~i~viGDiHG----~~~~L----~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~--~p~~v~~LrGNHE~ 124 (321)
+++++||+|- ....+ ..+++...-...+.+|++||++|.+....+--.+.-.++.. .+-.++.++||||.
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~ 81 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDL 81 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcc
Confidence 5789999995 22223 33344433334577899999999998433222222222222 23458899999994
No 51
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.24 E-value=7.1e-05 Score=69.73 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=47.4
Q ss_pred cCceEEEecCC-C-----------CHHHHHHHHHhCCC--CCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEe
Q 020757 53 EAPIKICGDVH-G-----------QFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLL 118 (321)
Q Consensus 53 ~~~i~viGDiH-G-----------~~~~L~~il~~~~~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~L 118 (321)
.++++.|+|+| . ..+.|.++++.+.. +..+-+|+.||+++.|. .+-+..+...-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 46799999999 1 24667777776532 23477889999999874 222333322222335679999
Q ss_pred CCCcccc
Q 020757 119 RGNHECA 125 (321)
Q Consensus 119 rGNHE~~ 125 (321)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.17 E-value=4.2e-06 Score=78.04 Aligned_cols=70 Identities=21% Similarity=0.105 Sum_probs=50.4
Q ss_pred CceEEEecCCCC----HHHHHHHHHhCCCCCCceEEEecCccCCC-C-CcHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 54 APIKICGDVHGQ----FSDLLRLFEYGGYPPEANYLFLGDYVDRG-K-QSIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 54 ~~i~viGDiHG~----~~~L~~il~~~~~~~~~~~vfLGD~VDrG-~-~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
+++++++|+|.. ...+.++++...-...+-++++||++|++ + ...++...|..++. +..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~--~~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAE--CAPTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhh--cCCEEEecCCCCcc
Confidence 679999999976 55677777765545567889999999954 2 23345555555553 34599999999974
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.15 E-value=6.9e-05 Score=66.29 Aligned_cols=70 Identities=13% Similarity=0.052 Sum_probs=44.4
Q ss_pred CceEEEecCCCCHH------------HHHHHHHhCCCCCCceEEEecCccCCCCCc---HHHHHHHHHHHhhccCCeeEe
Q 020757 54 APIKICGDVHGQFS------------DLLRLFEYGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVKYKENFFLL 118 (321)
Q Consensus 54 ~~i~viGDiHG~~~------------~L~~il~~~~~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~~p~~v~~L 118 (321)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..++.......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57899999996221 122222222223457899999999977653 555555544333344578999
Q ss_pred CCCcc
Q 020757 119 RGNHE 123 (321)
Q Consensus 119 rGNHE 123 (321)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 54
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.12 E-value=5.4e-06 Score=74.18 Aligned_cols=71 Identities=25% Similarity=0.187 Sum_probs=51.5
Q ss_pred CceEEEecCCCCHH----HHHHHHHhCCCCCCceEEEecCccCCCCCcH-HHHHHHHHHHhhccCCeeEeCCCccccc
Q 020757 54 APIKICGDVHGQFS----DLLRLFEYGGYPPEANYLFLGDYVDRGKQSI-ETICLLLAYKVKYKENFFLLRGNHECAS 126 (321)
Q Consensus 54 ~~i~viGDiHG~~~----~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~-evl~ll~~lk~~~p~~v~~LrGNHE~~~ 126 (321)
+++++++|+|+... .+.++++.+.....+.+++.||++|.+.... ++..++..+ ..+..++.+.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l--~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKL--KAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhcc--CCCCCEEEECCCccccc
Confidence 67999999998643 5667776655445578889999999987765 444444333 23457999999999854
No 55
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.10 E-value=9.5e-05 Score=68.64 Aligned_cols=73 Identities=21% Similarity=0.200 Sum_probs=48.5
Q ss_pred ceEEEecCC--C-----------CHHHHHHHHHhCCCCCCceEEEecCccCCCCC-cHHHHHHHHHHHhhccCCeeEeCC
Q 020757 55 PIKICGDVH--G-----------QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ-SIETICLLLAYKVKYKENFFLLRG 120 (321)
Q Consensus 55 ~i~viGDiH--G-----------~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~-s~evl~ll~~lk~~~p~~v~~LrG 120 (321)
++.++||+| . ....|.++++.+.....+-+|++||+++.|.. +.+-+..+.+.--..+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 588999999 2 24566777766644446788999999998873 223333333222223457999999
Q ss_pred Cccccch
Q 020757 121 NHECASI 127 (321)
Q Consensus 121 NHE~~~~ 127 (321)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998644
No 56
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.00 E-value=0.00028 Score=65.03 Aligned_cols=71 Identities=13% Similarity=0.017 Sum_probs=42.9
Q ss_pred ceEEEecCCCCH----------------HHHHHHHHhCCC--CCCceEEEecCccCCCCCcH---HHHHHH-HHHHhh-c
Q 020757 55 PIKICGDVHGQF----------------SDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSI---ETICLL-LAYKVK-Y 111 (321)
Q Consensus 55 ~i~viGDiHG~~----------------~~L~~il~~~~~--~~~~~~vfLGD~VDrG~~s~---evl~ll-~~lk~~-~ 111 (321)
.++++||+|-.. ..|.++++.+.- +..+-++++||+++.|...- +....+ ..++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 467888888753 134555555432 24467888999999887541 111111 112211 2
Q ss_pred cCCeeEeCCCcccc
Q 020757 112 KENFFLLRGNHECA 125 (321)
Q Consensus 112 p~~v~~LrGNHE~~ 125 (321)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999984
No 57
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.96 E-value=1.7e-05 Score=72.37 Aligned_cols=68 Identities=21% Similarity=0.167 Sum_probs=48.5
Q ss_pred ceEEEecCCCCH------HHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 55 PIKICGDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 55 ~i~viGDiHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
++.+++|+|+++ ..+.++++.+.-.+.+.+|+.||++++.+.+.+.+..+..+ .+..++.+.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999753 22555666554445688999999999876666655544432 345799999999975
No 58
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.94 E-value=0.00045 Score=63.65 Aligned_cols=74 Identities=20% Similarity=0.239 Sum_probs=51.7
Q ss_pred CceEEEecCCCC------HHHHHHHHHhCCCCCCceEEEecCccCCCC-CcHHHHHHHHHHHhhccCCeeEeCCCccccc
Q 020757 54 APIKICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDRGK-QSIETICLLLAYKVKYKENFFLLRGNHECAS 126 (321)
Q Consensus 54 ~~i~viGDiHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~-~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~ 126 (321)
++++.|+|+|-. ...+..+++.+...+.|.+|+.||+.+.|. .+.+-+..++. +...+..++.++||||.+.
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDARV 79 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCCc
Confidence 468899999977 344556667776666689999999999963 22222222222 2356778999999999987
Q ss_pred hh
Q 020757 127 IN 128 (321)
Q Consensus 127 ~~ 128 (321)
.+
T Consensus 80 ~~ 81 (301)
T COG1409 80 VN 81 (301)
T ss_pred hH
Confidence 65
No 59
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.92 E-value=0.0015 Score=58.88 Aligned_cols=205 Identities=17% Similarity=0.188 Sum_probs=116.6
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCcc--CCCCCcHHHHH-HHHHHHhhccCCeeEeCCCccccchhh
Q 020757 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYV--DRGKQSIETIC-LLLAYKVKYKENFFLLRGNHECASINR 129 (321)
Q Consensus 53 ~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~V--DrG~~s~evl~-ll~~lk~~~p~~v~~LrGNHE~~~~~~ 129 (321)
.|++..+.|+||.++.+.++++.+.....+.+++.||+. +.|+.-.-.-. .+..++ .....|+.++||.|...+-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 578999999999999999999988766778899999999 77764322211 123332 24568999999988865431
Q ss_pred hccchHHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCC-C-----CHHHHHcccCCCCCCCcchhhhhhh
Q 020757 130 IYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDL-K-----NLDQIRNIARPVDVPDQGLLCDLLW 203 (321)
Q Consensus 130 ~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~-~-----~l~~i~~i~r~~~~~~~~~~~dlLW 203 (321)
.....+..+.. -..-+++=.+|-=||..|.. . +-++|....+..-........=++.
T Consensus 82 -------~l~~~~~~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~ 144 (226)
T COG2129 82 -------VLKNAGVNVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLT 144 (226)
T ss_pred -------HHHhccccccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEe
Confidence 11112211111 12223333344446665532 1 2333332221100000000000111
Q ss_pred -cCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEE
Q 020757 204 -ADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSV 282 (321)
Q Consensus 204 -sdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i 282 (321)
+-|-..... .+-| -.--|..+++++.++.+-.+.|.||=--..|++.-.+ ||+-.|.-.+ .-..|++.+
T Consensus 145 HaPP~gt~~d---~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l 214 (226)
T COG2129 145 HAPPYGTLLD---TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIEL 214 (226)
T ss_pred cCCCCCcccc---CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEe
Confidence 112111001 1222 1235899999999999999999999777788876544 5555554433 356778888
Q ss_pred cCC
Q 020757 283 DDT 285 (321)
Q Consensus 283 ~~~ 285 (321)
+++
T Consensus 215 ~~~ 217 (226)
T COG2129 215 EKE 217 (226)
T ss_pred cCc
Confidence 777
No 60
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.91 E-value=1.8e-06 Score=84.77 Aligned_cols=281 Identities=12% Similarity=0.045 Sum_probs=183.4
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeec----CceEEEecCCCCHHHHHHHHHhCCCCCC-ceEEEecCccCCCCCcHHH
Q 020757 26 QLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIET 100 (321)
Q Consensus 26 ~~~~~~~~~l~~~a~~~l~~ep~~l~~~----~~i~viGDiHG~~~~L~~il~~~~~~~~-~~~vfLGD~VDrG~~s~ev 100 (321)
.|...++..++.-+.+.++.+|+...+. .-.+.++|.||.+.|+.++++.- |.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 4677889999999999999999888873 34899999999999999998864 333 3488999999999999999
Q ss_pred HHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhch---hhhhhhccccccCCeEEEEcCcEEEecCcCCCCC
Q 020757 101 ICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV---RVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDL 177 (321)
Q Consensus 101 l~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~ 177 (321)
+..+...+...|+...+.|++||+..+...++|..++...++. ..+..+...+.. |++....+.++=-| .+
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~le~~-----kv 165 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPVLEDH-----KV 165 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCcccccc-----hh
Confidence 9999999999999999999999999998888888777666632 222222221111 14444443332222 11
Q ss_pred CCHHHHHccc-----------------------------CCCCCCCcchhhhhhhcCCCCCCCCcccCCCCcccccCHHH
Q 020757 178 KNLDQIRNIA-----------------------------RPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADK 228 (321)
Q Consensus 178 ~~l~~i~~i~-----------------------------r~~~~~~~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~ 228 (321)
+.+.+..+. .+++. ..-.+..|+++......+....++.+...++..
T Consensus 166 -t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~---~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~ 241 (476)
T KOG0376|consen 166 -TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEI---SVPGDVKISVCGDTHGQFYDLLNIFELNGLPSE 241 (476)
T ss_pred -hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEe---ecCCCceEEecCCccccccchhhhHhhcCCCCC
Confidence 222222111 11111 144567888887665556666777777778888
Q ss_pred HHHHHHhCCCceEEEeeeec------------ccCeEEecC---CeEEEEecCCCCCC------CCCCc-EEEE--EEcC
Q 020757 229 VVEFLQKHDLDLICRAHQVV------------EDGYEFFAK---RQLVTVFSAPNYCG------EFDNA-GAMM--SVDD 284 (321)
Q Consensus 229 ~~~fl~~~~~~~iIrgH~~~------------~~G~~~~~~---~~~iTifSa~~y~~------~~~n~-ga~l--~i~~ 284 (321)
+..||...++.-+++.|.-+ ..+|...++ +.++++|+.+.++. ..+|. ++.. -+-.
T Consensus 242 t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~ 321 (476)
T KOG0376|consen 242 TNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAH 321 (476)
T ss_pred cccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchh
Confidence 88999988888888888542 223332222 24889999988774 12333 3322 2222
Q ss_pred CCceEEEEEeccc-ccCcccCCC--CCCCCCCCCCCC
Q 020757 285 TLTCSFQILKASE-KKGKVGFGN--NMLRPGTPPHKG 318 (321)
Q Consensus 285 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~ 318 (321)
-..-.+.+++--- .+...-++| ++.|+-.||..|
T Consensus 322 ~i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~ 358 (476)
T KOG0376|consen 322 LINNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEG 358 (476)
T ss_pred hhcCceEEEecCcCCCCCccHHHHHhhhhccCCcccc
Confidence 2223444443222 222333444 788888887765
No 61
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.85 E-value=3.8e-05 Score=70.95 Aligned_cols=73 Identities=21% Similarity=0.193 Sum_probs=48.7
Q ss_pred CceEEEecCCC-C-----------HHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHH----HHHHHHhhccCCeeE
Q 020757 54 APIKICGDVHG-Q-----------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETIC----LLLAYKVKYKENFFL 117 (321)
Q Consensus 54 ~~i~viGDiHG-~-----------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~----ll~~lk~~~p~~v~~ 117 (321)
|+++.++|+|- . ...|.++++.+.-...+.+++.||++|+...+.+... ++..|+-..|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 67899999993 2 2345555554444456789999999999866654432 333333222357999
Q ss_pred eCCCccccc
Q 020757 118 LRGNHECAS 126 (321)
Q Consensus 118 LrGNHE~~~ 126 (321)
+.||||...
T Consensus 81 i~GNHD~~~ 89 (253)
T TIGR00619 81 ISGNHDSAQ 89 (253)
T ss_pred EccCCCChh
Confidence 999999853
No 62
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.81 E-value=4.1e-05 Score=73.75 Aligned_cols=73 Identities=23% Similarity=0.351 Sum_probs=49.2
Q ss_pred CceEEEecCC-C-----------CHHHHHHHHHhCCCCCCceEEEecCccCCC-CCcHHHHHHHHH--HHh--hccCCee
Q 020757 54 APIKICGDVH-G-----------QFSDLLRLFEYGGYPPEANYLFLGDYVDRG-KQSIETICLLLA--YKV--KYKENFF 116 (321)
Q Consensus 54 ~~i~viGDiH-G-----------~~~~L~~il~~~~~~~~~~~vfLGD~VDrG-~~s~evl~ll~~--lk~--~~p~~v~ 116 (321)
|+++.+||+| | ....|.++++.+.-...+.+++.||++|+. +.+.+++.++.. ++. ..+-.|+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999999 4 234455565555445568899999999985 445555444433 222 2345799
Q ss_pred EeCCCccccc
Q 020757 117 LLRGNHECAS 126 (321)
Q Consensus 117 ~LrGNHE~~~ 126 (321)
+|.||||...
T Consensus 81 ~I~GNHD~~~ 90 (340)
T PHA02546 81 VLVGNHDMYY 90 (340)
T ss_pred EEccCCCccc
Confidence 9999999743
No 63
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.74 E-value=0.0001 Score=63.65 Aligned_cols=67 Identities=25% Similarity=0.354 Sum_probs=43.4
Q ss_pred eEEEecCCCCHHHH---------------HHHHHhCC--CCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEe
Q 020757 56 IKICGDVHGQFSDL---------------LRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLL 118 (321)
Q Consensus 56 i~viGDiHG~~~~L---------------~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~L 118 (321)
+++++|+|=..... ..+++... ..+.+.+|++||+++++..+.. +.++.. .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 47899999655432 12233211 2356889999999999986543 333332 24569999
Q ss_pred CCCccccch
Q 020757 119 RGNHECASI 127 (321)
Q Consensus 119 rGNHE~~~~ 127 (321)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997644
No 64
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.70 E-value=0.00012 Score=65.25 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=22.5
Q ss_pred CHHHHHHHHHhCCCceEEEeeeecccCeE
Q 020757 225 GADKVVEFLQKHDLDLICRAHQVVEDGYE 253 (321)
Q Consensus 225 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 253 (321)
.+..+.+.++..+++.+|.||+-.+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 45567778889999999999998754433
No 65
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.64 E-value=0.00018 Score=72.95 Aligned_cols=113 Identities=18% Similarity=0.238 Sum_probs=60.3
Q ss_pred cCceEEEecCC-CCH----HHHHHHHHhCC---------CCCCceEEEecCccCC-CCCc---------------HHHHH
Q 020757 53 EAPIKICGDVH-GQF----SDLLRLFEYGG---------YPPEANYLFLGDYVDR-GKQS---------------IETIC 102 (321)
Q Consensus 53 ~~~i~viGDiH-G~~----~~L~~il~~~~---------~~~~~~~vfLGD~VDr-G~~s---------------~evl~ 102 (321)
+..+++++|+| |.- ..+..+++.+. ....+.+|++||++|. |.++ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35689999999 652 23444444322 1233689999999995 3221 12333
Q ss_pred HHHHHHhhccCCeeEeCCCccccchhhhc-cchHHHHHHhchhhhhhhccccccCCeEEEEcC-cEEEecCc
Q 020757 103 LLLAYKVKYKENFFLLRGNHECASINRIY-GFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGG 172 (321)
Q Consensus 103 ll~~lk~~~p~~v~~LrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgG 172 (321)
+|..+. ..-.|++++||||........ .+...+...+. ..-..++.. |....+++ +++++||-
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~----~~~v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFP----EHNVTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcC----cCCeEEecC-CeEEEECCEEEEEECCC
Confidence 333332 234799999999976433221 12222211111 112234444 65444454 78999984
No 66
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.64 E-value=0.00017 Score=65.19 Aligned_cols=69 Identities=20% Similarity=0.184 Sum_probs=45.3
Q ss_pred ceEEEecCCCC------------HHHHHHHHHhCCCC--CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCC
Q 020757 55 PIKICGDVHGQ------------FSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRG 120 (321)
Q Consensus 55 ~i~viGDiHG~------------~~~L~~il~~~~~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrG 120 (321)
++++++|+|=. ...|.++++.+.-. +.+-+|++||+++.|... ....+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 57899999944 34567777754433 557889999999987532 112222221122557899999
Q ss_pred Ccccc
Q 020757 121 NHECA 125 (321)
Q Consensus 121 NHE~~ 125 (321)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 67
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.62 E-value=0.00018 Score=62.40 Aligned_cols=58 Identities=19% Similarity=0.134 Sum_probs=34.1
Q ss_pred HHHHHHhCCCCCCceEEEecCccCCCCCcH-HHHHHH-HHHHhhccCCeeEeCCCccccc
Q 020757 69 LLRLFEYGGYPPEANYLFLGDYVDRGKQSI-ETICLL-LAYKVKYKENFFLLRGNHECAS 126 (321)
Q Consensus 69 L~~il~~~~~~~~~~~vfLGD~VDrG~~s~-evl~ll-~~lk~~~p~~v~~LrGNHE~~~ 126 (321)
+.++.+.+...+.+.+|++||++|...... +....+ .......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444443345688999999998654332 211111 1112234558999999999853
No 68
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.61 E-value=0.00013 Score=67.89 Aligned_cols=70 Identities=19% Similarity=0.296 Sum_probs=45.1
Q ss_pred eEEEecCCCCHHHHHHHHHh---CCCCCCceEEEecCccCCCCC-cHHHHH------HHH---HH---HhhccCCeeEeC
Q 020757 56 IKICGDVHGQFSDLLRLFEY---GGYPPEANYLFLGDYVDRGKQ-SIETIC------LLL---AY---KVKYKENFFLLR 119 (321)
Q Consensus 56 i~viGDiHG~~~~L~~il~~---~~~~~~~~~vfLGD~VDrG~~-s~evl~------ll~---~l---k~~~p~~v~~Lr 119 (321)
|+|+||+||+++.+.+.++. ....+.+-+|++||+-..+.. ..+.+. -+. .+ ....|--+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 68999999999998764443 233466889999999654432 232221 111 11 223465689999
Q ss_pred CCcccc
Q 020757 120 GNHECA 125 (321)
Q Consensus 120 GNHE~~ 125 (321)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 69
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.56 E-value=0.00018 Score=63.98 Aligned_cols=74 Identities=24% Similarity=0.299 Sum_probs=49.3
Q ss_pred ceEEEecCC-CC--------------HHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhc---cCCee
Q 020757 55 PIKICGDVH-GQ--------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKY---KENFF 116 (321)
Q Consensus 55 ~i~viGDiH-G~--------------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~---p~~v~ 116 (321)
+++.++|+| |. +..|.++++.+.....+.+|+.||++|....+.+.+..+...-... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 32 2236666666554556789999999998876555444333322222 45799
Q ss_pred EeCCCccccchh
Q 020757 117 LLRGNHECASIN 128 (321)
Q Consensus 117 ~LrGNHE~~~~~ 128 (321)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999986543
No 70
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.55 E-value=0.00048 Score=63.67 Aligned_cols=71 Identities=24% Similarity=0.162 Sum_probs=41.6
Q ss_pred eEEEecCCCCH------HHH-HHHHHhCCCCCCceEEEecCccCCCCCc--------HHHHHHHHHHH---hhccCCeeE
Q 020757 56 IKICGDVHGQF------SDL-LRLFEYGGYPPEANYLFLGDYVDRGKQS--------IETICLLLAYK---VKYKENFFL 117 (321)
Q Consensus 56 i~viGDiHG~~------~~L-~~il~~~~~~~~~~~vfLGD~VDrG~~s--------~evl~ll~~lk---~~~p~~v~~ 117 (321)
++.++|+|-.. ... ..+++.+.....+-+|++||++|+.... .+--.++-.++ ...+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 56789999621 112 2334444334456889999999986521 11112222222 223567999
Q ss_pred eCCCccccc
Q 020757 118 LRGNHECAS 126 (321)
Q Consensus 118 LrGNHE~~~ 126 (321)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 71
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.54 E-value=0.00077 Score=61.24 Aligned_cols=198 Identities=16% Similarity=0.231 Sum_probs=101.4
Q ss_pred EEEecCCCC------HHHHHHHHHhCCCCCCceEEEecCccCC--CCC-c----HHHHHHHHHHHhhccCCeeEeCCCcc
Q 020757 57 KICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDR--GKQ-S----IETICLLLAYKVKYKENFFLLRGNHE 123 (321)
Q Consensus 57 ~viGDiHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDr--G~~-s----~evl~ll~~lk~~~p~~v~~LrGNHE 123 (321)
+.|+|+|=. -+.|.+.|+... +..+.++++||++|- |.. . -+|...|..+ .....+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 368999954 334555666543 356789999999973 332 1 2333333322 234568999999999
Q ss_pred ccchhhhccchHHHHHHhchhhhhhhccccccCCeEEE---EcCcEEEecCcCCCCCCCHHHHHcccCCCCC--------
Q 020757 124 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAAL---VDEKILCMHGGLSPDLKNLDQIRNIARPVDV-------- 192 (321)
Q Consensus 124 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~---i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~-------- 192 (321)
.. +... ++ .-..-+.-+|-..+ -+++++.+||-.--. ..............
T Consensus 79 fl-l~~~----------f~-----~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t--~~~~y~~~r~~~~~~~~~~lfl 140 (237)
T COG2908 79 FL-LGKR----------FA-----QEAGGMTLLPDPIVLDLYGKRILLAHGDTFCT--DDRAYQWFRYKVHWAWLQLLFL 140 (237)
T ss_pred HH-HHHH----------HH-----hhcCceEEcCcceeeeecCcEEEEEeCCcccc--hHHHHHHHHHHcccHHHHHHHH
Confidence 53 2211 10 00111223333333 257899999965311 11111111000000
Q ss_pred --CCc--chhhhhhhcCCCCCCCCcccCCCCccc---ccCHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEec
Q 020757 193 --PDQ--GLLCDLLWADPDKDIEGWGENDRGVSY---TFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFS 265 (321)
Q Consensus 193 --~~~--~~~~dlLWsdP~~~~~~~~~~~rg~~~---~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifS 265 (321)
+-. .-+..-+|+.- .|......... -..+.++.+-++++|++.+|.||+-.+..-....-. -|-
T Consensus 141 nl~l~~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~-yi~--- 211 (237)
T COG2908 141 NLPLRVRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGIT-YIN--- 211 (237)
T ss_pred HhHHHHHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCce-EEe---
Confidence 000 01112244433 12222111111 235678888999999999999999876655443211 111
Q ss_pred CCCCCCCCCCcEEEEEEcCCCc
Q 020757 266 APNYCGEFDNAGAMMSVDDTLT 287 (321)
Q Consensus 266 a~~y~~~~~n~ga~l~i~~~~~ 287 (321)
+|.-...+++++++.+..
T Consensus 212 ----lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 212 ----LGDWVSEGSILEVDDGGL 229 (237)
T ss_pred ----cCcchhcceEEEEecCcE
Confidence 122235778898887754
No 72
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.52 E-value=0.00082 Score=57.51 Aligned_cols=47 Identities=26% Similarity=0.299 Sum_probs=29.3
Q ss_pred CCceEEEecCccCCCCCcH-HHH-HHHHHHHhh---c-cCCeeEeCCCccccc
Q 020757 80 PEANYLFLGDYVDRGKQSI-ETI-CLLLAYKVK---Y-KENFFLLRGNHECAS 126 (321)
Q Consensus 80 ~~~~~vfLGD~VDrG~~s~-evl-~ll~~lk~~---~-p~~v~~LrGNHE~~~ 126 (321)
..+.+|++||++|.+...- +.. ..+..++.. . ...++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4578999999999876422 221 222222221 1 246999999999743
No 73
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.50 E-value=0.00025 Score=70.00 Aligned_cols=72 Identities=24% Similarity=0.312 Sum_probs=46.5
Q ss_pred CceEEEecCC-CC-H------HH----HHHHHHhCCCCCCceEEEecCccCCCCCcHHHH----HHHHHHHhhccCCeeE
Q 020757 54 APIKICGDVH-GQ-F------SD----LLRLFEYGGYPPEANYLFLGDYVDRGKQSIETI----CLLLAYKVKYKENFFL 117 (321)
Q Consensus 54 ~~i~viGDiH-G~-~------~~----L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl----~ll~~lk~~~p~~v~~ 117 (321)
|+++.++|+| |. + .+ |.++++.+.....+.+|+.||++|++..+.+.. .++..++ ..+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~-~~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQ-QTGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHH-hcCCcEEE
Confidence 6789999999 32 1 11 233444444455688999999999986554432 2233333 22346999
Q ss_pred eCCCccccc
Q 020757 118 LRGNHECAS 126 (321)
Q Consensus 118 LrGNHE~~~ 126 (321)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999853
No 74
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.45 E-value=0.0018 Score=65.94 Aligned_cols=69 Identities=20% Similarity=0.289 Sum_probs=47.1
Q ss_pred CHHHHHHHHHhCCCc----eEEEeeeecc--cCeE-EecCCeEEEE---ecCCCCCCCCCCcEEEEEEcCCCceEEEEEe
Q 020757 225 GADKVVEFLQKHDLD----LICRAHQVVE--DGYE-FFAKRQLVTV---FSAPNYCGEFDNAGAMMSVDDTLTCSFQILK 294 (321)
Q Consensus 225 g~~~~~~fl~~~~~~----~iIrgH~~~~--~G~~-~~~~~~~iTi---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 294 (321)
.++..+..|+..|++ .||-||.||. .|=. .-++||++.| ||.. |...++=+|=-| |.+.-........
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTL-iyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTL-IYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEE-EecCCcceeccCC
Confidence 466788899999998 9999999987 6655 3589999999 5554 655544455444 4444334444444
Q ss_pred c
Q 020757 295 A 295 (321)
Q Consensus 295 ~ 295 (321)
|
T Consensus 585 p 585 (640)
T PF06874_consen 585 P 585 (640)
T ss_pred C
Confidence 4
No 75
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.36 E-value=0.00055 Score=67.49 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=57.2
Q ss_pred cCceEEEecCCCC------------HHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhh----------
Q 020757 53 EAPIKICGDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVK---------- 110 (321)
Q Consensus 53 ~~~i~viGDiHG~------------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---------- 110 (321)
.++|++++|+|-- +..|.++++.+.-...+-+|+.||++|++.-|.+++..++.+-.+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~ 82 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCEL 82 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccch
Confidence 4789999999942 567788888876666788899999999999998887665443321
Q ss_pred --------------------------ccCCeeEeCCCccccc
Q 020757 111 --------------------------YKENFFLLRGNHECAS 126 (321)
Q Consensus 111 --------------------------~p~~v~~LrGNHE~~~ 126 (321)
..-.|+.+-||||...
T Consensus 83 ~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 83 EFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1337999999999964
No 76
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.33 E-value=0.0007 Score=61.56 Aligned_cols=69 Identities=17% Similarity=0.184 Sum_probs=43.0
Q ss_pred CceEEEecCC-CCHHH----------------HHHHHHhCCCCCCceEEEecCccCCCCCc---HHHHHHHHHHHhhccC
Q 020757 54 APIKICGDVH-GQFSD----------------LLRLFEYGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVKYKE 113 (321)
Q Consensus 54 ~~i~viGDiH-G~~~~----------------L~~il~~~~~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~~p~ 113 (321)
.++.||+|+| |--.. |.++.+.......+.+|++||+++..... .++..++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 5689999999 53222 22233333333458899999999765542 2222233222 34
Q ss_pred CeeEeCCCccccc
Q 020757 114 NFFLLRGNHECAS 126 (321)
Q Consensus 114 ~v~~LrGNHE~~~ 126 (321)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999753
No 77
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.26 E-value=0.0033 Score=58.61 Aligned_cols=70 Identities=17% Similarity=0.150 Sum_probs=41.5
Q ss_pred CceEEEecCCC----CHHHHHHHHHhCCCCCCceEEEecCccCCCCCc----HHH-HHHHHHHHhhccCCeeEeCCCccc
Q 020757 54 APIKICGDVHG----QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS----IET-ICLLLAYKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 54 ~~i~viGDiHG----~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s----~ev-l~ll~~lk~~~p~~v~~LrGNHE~ 124 (321)
-+++|+||.|. +...+.++.+. ....+-++++||+++.+... .+. +..+..+ ...-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPL--ASYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHH--HhcCCcEEcCccccc
Confidence 46899999995 33334444433 23446788899999644322 222 2222212 123468999999998
Q ss_pred cch
Q 020757 125 ASI 127 (321)
Q Consensus 125 ~~~ 127 (321)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 78
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.16 E-value=0.00094 Score=60.74 Aligned_cols=45 Identities=4% Similarity=-0.098 Sum_probs=30.7
Q ss_pred cCHHHHHHHHHhCCCceEEEeeeecccCeE---EecCCeEEEEecCCCCC
Q 020757 224 FGADKVVEFLQKHDLDLICRAHQVVEDGYE---FFAKRQLVTVFSAPNYC 270 (321)
Q Consensus 224 fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~---~~~~~~~iTifSa~~y~ 270 (321)
++...+.+.+++.++++++-||.-...-.. ...++ |+.+++|+=|
T Consensus 180 ~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~ 227 (232)
T cd07393 180 GDDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADY 227 (232)
T ss_pred CCHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchh
Confidence 355678888899999999999988643322 12444 5667766543
No 79
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.91 E-value=0.0077 Score=56.69 Aligned_cols=72 Identities=22% Similarity=0.207 Sum_probs=48.4
Q ss_pred CceEEEecCCCCHHH--HHHHHHhCCCCCCceEEEecCccCC-CCCcHHH-HHHHHHHHhhccCCeeEeCCCccccch
Q 020757 54 APIKICGDVHGQFSD--LLRLFEYGGYPPEANYLFLGDYVDR-GKQSIET-ICLLLAYKVKYKENFFLLRGNHECASI 127 (321)
Q Consensus 54 ~~i~viGDiHG~~~~--L~~il~~~~~~~~~~~vfLGD~VDr-G~~s~ev-l~ll~~lk~~~p~~v~~LrGNHE~~~~ 127 (321)
-+|+-++|+|-.... ..+.+........+-+++.|||+|+ .+.+.+. +..|.. +..|-.++.+.||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~--L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAK--LKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHh--hhccCCEEEEecccccccc
Confidence 358999999987655 2233333333333888999999996 5555554 444443 3467789999999988644
No 80
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.90 E-value=0.0035 Score=53.45 Aligned_cols=71 Identities=15% Similarity=0.113 Sum_probs=45.0
Q ss_pred ceEEEecCCCC------------HHHHHH-HHHhC--CCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeC
Q 020757 55 PIKICGDVHGQ------------FSDLLR-LFEYG--GYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLR 119 (321)
Q Consensus 55 ~i~viGDiHG~------------~~~L~~-il~~~--~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~Lr 119 (321)
.++++||+|=. .+.... +|... -..|++.+++|||+.-.-...-+...++-+| +.++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 37889999853 333332 22211 1347789999999986554444444444333 77899999
Q ss_pred CCccccchhh
Q 020757 120 GNHECASINR 129 (321)
Q Consensus 120 GNHE~~~~~~ 129 (321)
||||-..-..
T Consensus 81 GNhDk~~~~~ 90 (186)
T COG4186 81 GNHDKCHPMY 90 (186)
T ss_pred CCCCCCcccc
Confidence 9999865443
No 81
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.69 E-value=0.0047 Score=56.41 Aligned_cols=68 Identities=19% Similarity=0.247 Sum_probs=38.2
Q ss_pred EEEecCC--CCH---HHHHHHHHhC-CCC----CCceEEEecCccCCCCC------------cHH----HHHHHHHHHhh
Q 020757 57 KICGDVH--GQF---SDLLRLFEYG-GYP----PEANYLFLGDYVDRGKQ------------SIE----TICLLLAYKVK 110 (321)
Q Consensus 57 ~viGDiH--G~~---~~L~~il~~~-~~~----~~~~~vfLGD~VDrG~~------------s~e----vl~ll~~lk~~ 110 (321)
++|+|+| +.. ..+..+++.. +.. ..+.+|++||++|+... ..+ +..++..+ .
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~ 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDV--P 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhc--c
Confidence 6899999 331 2223333322 221 23788999999997310 011 22222222 2
Q ss_pred ccCCeeEeCCCccccc
Q 020757 111 YKENFFLLRGNHECAS 126 (321)
Q Consensus 111 ~p~~v~~LrGNHE~~~ 126 (321)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2357999999999853
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.58 E-value=0.0045 Score=52.78 Aligned_cols=119 Identities=18% Similarity=0.239 Sum_probs=79.4
Q ss_pred EEEecCCCCHHHHHHHHHhCC--CCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccch
Q 020757 57 KICGDVHGQFSDLLRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (321)
Q Consensus 57 ~viGDiHG~~~~L~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 134 (321)
.|+||+||+++.+..-++... -.+-+-++++||+..-...+-+ +.-.+.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999887766532 1355788999999976655533 33333344567788999999998
Q ss_pred HHHHHHhchhhhhhhccccccCCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCCCCCcc
Q 020757 135 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 214 (321)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~~~~~~ 214 (321)
.-.||++|.=+. .+ .+..+. ..+
T Consensus 69 ----------------------------~~DILlTh~wP~-gi---~~~~~~----------------~~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPK-GI---SKLSKV----------------PFE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCch-hh---hhhCCC----------------ccc---------
Confidence 447899887322 11 100000 000
Q ss_pred cCCCCcccccCHHHHHHHHHhCCCceEEEeeeec
Q 020757 215 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVV 248 (321)
Q Consensus 215 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~ 248 (321)
..+..-|...+.+++++..=.+.+-||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012235788999999999999999999754
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.46 E-value=0.0059 Score=53.06 Aligned_cols=47 Identities=26% Similarity=0.376 Sum_probs=30.1
Q ss_pred CCceEEEecCccCCCCCcH--HHHHHHHHHHhhc--------cCCeeEeCCCccccc
Q 020757 80 PEANYLFLGDYVDRGKQSI--ETICLLLAYKVKY--------KENFFLLRGNHECAS 126 (321)
Q Consensus 80 ~~~~~vfLGD~VDrG~~s~--evl~ll~~lk~~~--------p~~v~~LrGNHE~~~ 126 (321)
+.+.+|++||++|.+.... +....+..++..+ .-.++.+.||||...
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4578999999999887432 2222222222111 346999999999864
No 84
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.36 E-value=0.037 Score=51.27 Aligned_cols=24 Identities=4% Similarity=-0.057 Sum_probs=21.3
Q ss_pred cCHHHHHHHHHhCCCceEEEeeee
Q 020757 224 FGADKVVEFLQKHDLDLICRAHQV 247 (321)
Q Consensus 224 fg~~~~~~fl~~~~~~~iIrgH~~ 247 (321)
-.+++.++.|++.+-.+|.-||+-
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 368899999999999999999975
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.26 E-value=0.0091 Score=53.12 Aligned_cols=46 Identities=20% Similarity=0.382 Sum_probs=33.4
Q ss_pred CCceEEEecCccCCCCCc--HHHHHHHHHHHhhcc----CCeeEeCCCcccc
Q 020757 80 PEANYLFLGDYVDRGKQS--IETICLLLAYKVKYK----ENFFLLRGNHECA 125 (321)
Q Consensus 80 ~~~~~vfLGD~VDrG~~s--~evl~ll~~lk~~~p----~~v~~LrGNHE~~ 125 (321)
..+.++||||++|.|+.+ .|....+..++-.++ ..++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 457899999999999964 335555555553322 3788999999975
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.11 E-value=0.0097 Score=54.30 Aligned_cols=66 Identities=29% Similarity=0.312 Sum_probs=41.8
Q ss_pred ceEEEecCCCCH---------HHHHHHHHhCCCC-CCceEEEecCccCCCCCcH-----HHHHHHHHHHhhccCCeeEeC
Q 020757 55 PIKICGDVHGQF---------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLR 119 (321)
Q Consensus 55 ~i~viGDiHG~~---------~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~-----evl~ll~~lk~~~p~~v~~Lr 119 (321)
+++.++|+||.+ ..+..+++...-. ++.-++..||+++.++.+. .++..+.++ +-. ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCC-EEee
Confidence 578999999886 5566666665433 3335567899999877643 344333322 223 3456
Q ss_pred CCcccc
Q 020757 120 GNHECA 125 (321)
Q Consensus 120 GNHE~~ 125 (321)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 87
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.06 E-value=0.018 Score=56.25 Aligned_cols=74 Identities=23% Similarity=0.204 Sum_probs=52.8
Q ss_pred CceEEEecCCCC-------------HHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhcc---CCeeE
Q 020757 54 APIKICGDVHGQ-------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYK---ENFFL 117 (321)
Q Consensus 54 ~~i~viGDiHG~-------------~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p---~~v~~ 117 (321)
|++.-++|+|=- +++|..+++.+.-..-|-+|+-||+.|++.-|.+++.++...-..-. -.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578888999943 44455555555444557889999999999888888776554332222 37999
Q ss_pred eCCCccccch
Q 020757 118 LRGNHECASI 127 (321)
Q Consensus 118 LrGNHE~~~~ 127 (321)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999998653
No 88
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.04 E-value=0.039 Score=50.35 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=45.1
Q ss_pred cCceEEEecCCCCHHHHH----------------HHHH-hCCCCCCceEEEecCccCCCCC-----cHHHHHHHHHHHhh
Q 020757 53 EAPIKICGDVHGQFSDLL----------------RLFE-YGGYPPEANYLFLGDYVDRGKQ-----SIETICLLLAYKVK 110 (321)
Q Consensus 53 ~~~i~viGDiHG~~~~L~----------------~il~-~~~~~~~~~~vfLGD~VDrG~~-----s~evl~ll~~lk~~ 110 (321)
..++.||+|+|=-+.... +.+. .......+++|.+||+-.-.+. ..|+-.++-.++ .
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~-~ 97 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD-E 97 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-c
Confidence 578999999996544332 2222 1122345789999999865433 234433333332 2
Q ss_pred ccCCeeEeCCCccccchh
Q 020757 111 YKENFFLLRGNHECASIN 128 (321)
Q Consensus 111 ~p~~v~~LrGNHE~~~~~ 128 (321)
+ .+++++||||...-.
T Consensus 98 ~--evi~i~GNHD~~i~~ 113 (235)
T COG1407 98 R--EVIIIRGNHDNGIEE 113 (235)
T ss_pred C--cEEEEeccCCCcccc
Confidence 2 599999999986443
No 89
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=95.79 E-value=0.0093 Score=54.04 Aligned_cols=73 Identities=21% Similarity=0.209 Sum_probs=44.5
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHH-------------------------HHHHHHH
Q 020757 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETI-------------------------CLLLAYK 108 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl-------------------------~ll~~lk 108 (321)
.+|.+++|.||+++.+.++.+.+.-...|-++|+||++-....+-|-. +-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 468999999999999999988765556788999999996554443332 2333332
Q ss_pred hhccCCeeEeCCCccccc
Q 020757 109 VKYKENFFLLRGNHECAS 126 (321)
Q Consensus 109 ~~~p~~v~~LrGNHE~~~ 126 (321)
-..+-.+++|+||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 345567999999999963
No 90
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.78 E-value=0.31 Score=48.69 Aligned_cols=206 Identities=17% Similarity=0.204 Sum_probs=107.5
Q ss_pred ceEEEecCCC-CH----HHHHHHHHhCCCC----CCceE-EEecCccCC-CC-----------CcHHHHHHHHHHHhhcc
Q 020757 55 PIKICGDVHG-QF----SDLLRLFEYGGYP----PEANY-LFLGDYVDR-GK-----------QSIETICLLLAYKVKYK 112 (321)
Q Consensus 55 ~i~viGDiHG-~~----~~L~~il~~~~~~----~~~~~-vfLGD~VDr-G~-----------~s~evl~ll~~lk~~~p 112 (321)
.+++++|+|= .. +.+...++.++-+ +.-+| +.-||.||. |- +..|-...+..+--.-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 3789999995 22 2333444443333 22345 457899994 21 12333334444333445
Q ss_pred C--CeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccCCeEEEEcC-cEEEecCcCCCCCCCHHHHHcccCC
Q 020757 113 E--NFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARP 189 (321)
Q Consensus 113 ~--~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgGi~p~~~~l~~i~~i~r~ 189 (321)
. .|++.+||||..-....-....+. ...++...+-.|-.=|...-+++ .++..|| .+++|+...-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~----~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~ 376 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPEL----IKSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPG 376 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchh----hcccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCC
Confidence 4 688999999986554332222222 12233333333334455544444 6888888 377777655433
Q ss_pred CCCCCc-chh-hhhhhcCCCCCCCCcccCCCCcccccCHH--HHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEec
Q 020757 190 VDVPDQ-GLL-CDLLWADPDKDIEGWGENDRGVSYTFGAD--KVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFS 265 (321)
Q Consensus 190 ~~~~~~-~~~-~dlLWsdP~~~~~~~~~~~rg~~~~fg~~--~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifS 265 (321)
.+..+. ..+ +-|.|.--.+...+-.+ .+.|.+| ++++ --+.++.||+.. .|+..+.+.+++..+|
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~kD~lVIee-----vPDv~~~Ghvh~-~g~~~y~gv~~vns~T 445 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPETKDYLVIEE-----VPDVFHTGHVHK-FGTGVYEGVNLVNSGT 445 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCccc-----cccCCcCceeecc-----CCcEEEEccccc-cceeEEeccceEEeee
Confidence 222111 122 23334332221111100 0011111 1111 146789999998 7999888888999999
Q ss_pred CCCCCCCCCCcEEEEEEcCC
Q 020757 266 APNYCGEFDNAGAMMSVDDT 285 (321)
Q Consensus 266 a~~y~~~~~n~ga~l~i~~~ 285 (321)
.+.+. -.+-++.|+..
T Consensus 446 ~q~qT----efqk~vni~p~ 461 (481)
T COG1311 446 WQEQT----EFQKMVNINPT 461 (481)
T ss_pred ecchh----ccceEEEecCc
Confidence 88764 34456666554
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.27 E-value=0.039 Score=48.99 Aligned_cols=65 Identities=18% Similarity=0.204 Sum_probs=40.3
Q ss_pred cCCCCHHHHHHHHHhCCC-CCCceEEEecCccCCCCCcHH-HHHHHHHHHhhc---------------------cCCeeE
Q 020757 61 DVHGQFSDLLRLFEYGGY-PPEANYLFLGDYVDRGKQSIE-TICLLLAYKVKY---------------------KENFFL 117 (321)
Q Consensus 61 DiHG~~~~L~~il~~~~~-~~~~~~vfLGD~VDrG~~s~e-vl~ll~~lk~~~---------------------p~~v~~ 117 (321)
|++|+=.=|.++++.+-. -..+.++||||++|.|--+-+ --....+++-.+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 556665666777665433 244788999999998753322 223333333322 135689
Q ss_pred eCCCcccc
Q 020757 118 LRGNHECA 125 (321)
Q Consensus 118 LrGNHE~~ 125 (321)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999983
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.22 E-value=0.028 Score=52.26 Aligned_cols=65 Identities=22% Similarity=0.226 Sum_probs=37.8
Q ss_pred ceEEEecCCCCH----------------HHHHHHHHhCCCCCCceEEE-ecCccCCCCCc-----------HHHHHHHHH
Q 020757 55 PIKICGDVHGQF----------------SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQS-----------IETICLLLA 106 (321)
Q Consensus 55 ~i~viGDiHG~~----------------~~L~~il~~~~~~~~~~~vf-LGD~VDrG~~s-----------~evl~ll~~ 106 (321)
.|+.++|+||++ ..+..+++...-...+.+++ .||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 478899999986 33455555543322334443 79999876522 123333333
Q ss_pred HHhhccCCeeEeCCCccc
Q 020757 107 YKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 107 lk~~~p~~v~~LrGNHE~ 124 (321)
+ -. . ++..||||.
T Consensus 82 ~---g~-d-~~~lGNHe~ 94 (277)
T cd07410 82 L---GY-D-AGTLGNHEF 94 (277)
T ss_pred c---CC-C-EEeecccCc
Confidence 3 22 2 555699996
No 93
>PLN02533 probable purple acid phosphatase
Probab=94.86 E-value=0.039 Score=54.92 Aligned_cols=71 Identities=15% Similarity=0.117 Sum_probs=39.8
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcH--HH-HHHHHHHHhhccCCeeEeCCCccccc
Q 020757 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--ET-ICLLLAYKVKYKENFFLLRGNHECAS 126 (321)
Q Consensus 53 ~~~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~--ev-l~ll~~lk~~~p~~v~~LrGNHE~~~ 126 (321)
.-+++++||+|-. ......++.+.....+-++++||+++-+.+.- +. ..++..+. ..-.++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~--s~~P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLA--SQRPWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHh--hcCceEEeCccccccc
Confidence 3468999999632 11122333333334567888999997654321 11 12222221 1235889999999863
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.37 E-value=0.097 Score=48.31 Aligned_cols=70 Identities=21% Similarity=0.256 Sum_probs=39.7
Q ss_pred ceEEEecCCCC--H--HHHHHHHH-hCCCCCCceEEEecCcc-CCCCCcH------HHHHHHHHHHhhccCCeeEeCCCc
Q 020757 55 PIKICGDVHGQ--F--SDLLRLFE-YGGYPPEANYLFLGDYV-DRGKQSI------ETICLLLAYKVKYKENFFLLRGNH 122 (321)
Q Consensus 55 ~i~viGDiHG~--~--~~L~~il~-~~~~~~~~~~vfLGD~V-DrG~~s~------evl~ll~~lk~~~p~~v~~LrGNH 122 (321)
+++++||.-.. . .++.+.+. .+...+.+-+|++||+| +-|..+. +.+..++.. +...-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 57899998764 1 23333333 33223456789999997 4553221 222222221 11234699999999
Q ss_pred ccc
Q 020757 123 ECA 125 (321)
Q Consensus 123 E~~ 125 (321)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 95
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.04 E-value=0.083 Score=48.68 Aligned_cols=66 Identities=21% Similarity=0.154 Sum_probs=39.0
Q ss_pred ceEEEecCCCCH----------HHHHHHHHhCCCCCCceEEEecCccCCCCCcH-----HHHHHHHHHHhhccCCeeEeC
Q 020757 55 PIKICGDVHGQF----------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLR 119 (321)
Q Consensus 55 ~i~viGDiHG~~----------~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~-----evl~ll~~lk~~~p~~v~~Lr 119 (321)
+++-++|+||++ ..+..+++.....+..-++..||+++..+.+. .++..+-.+ .-.+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 477899999974 44555665543334455666899998765431 222222222 2233 456
Q ss_pred CCcccc
Q 020757 120 GNHECA 125 (321)
Q Consensus 120 GNHE~~ 125 (321)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 96
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=94.03 E-value=0.14 Score=40.30 Aligned_cols=44 Identities=18% Similarity=0.357 Sum_probs=33.7
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q 020757 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 52 (321)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~~l~~ 52 (321)
|+.+.+.++++.+...+ .|+...+..|+.++.++|+++|+++++
T Consensus 52 it~efv~~mie~FK~~K--------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 52 ITLEFVKAMIEWFKNQK--------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp --HHHHHHHHHHHHCT------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCHHHHHHHHHHHHhCC--------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 45678888999988766 689999999999999999999999985
No 97
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=93.11 E-value=0.38 Score=42.24 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=44.4
Q ss_pred CCCceEEEecCcc--CCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHhchhhhhhhccccccC
Q 020757 79 PPEANYLFLGDYV--DRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCL 156 (321)
Q Consensus 79 ~~~~~~vfLGD~V--DrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~L 156 (321)
.+++.++.-||+- =|=++..+-+.++-+| |..=+++|||||.+.-. ...+...+... ....++.|..+
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s-----~skl~n~lp~~-l~~~n~~f~l~ 111 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSS-----ISKLNNALPPI-LFYLNNGFELL 111 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccch-----HHHHHhhcCch-HhhhccceeEe
Confidence 3456666679984 2344555556666555 88889999999997543 22333333322 34456666666
Q ss_pred CeEEEEc
Q 020757 157 PVAALVD 163 (321)
Q Consensus 157 Pl~~~i~ 163 (321)
-.| +++
T Consensus 112 n~a-I~G 117 (230)
T COG1768 112 NYA-IVG 117 (230)
T ss_pred eEE-EEE
Confidence 533 434
No 98
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.01 E-value=0.1 Score=48.98 Aligned_cols=66 Identities=27% Similarity=0.319 Sum_probs=40.1
Q ss_pred ceEEEecCCCCHHH--------------HHHHHHhCCCC-CCceEEEecCccCCCCC-c-----HHHHHHHHHHHhhccC
Q 020757 55 PIKICGDVHGQFSD--------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQ-S-----IETICLLLAYKVKYKE 113 (321)
Q Consensus 55 ~i~viGDiHG~~~~--------------L~~il~~~~~~-~~~~~vfLGD~VDrG~~-s-----~evl~ll~~lk~~~p~ 113 (321)
.|+.+.|+||++.. +..+++..... +..-++..||+++..+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 47889999998543 55566554332 33456668999987654 2 234444444421
Q ss_pred CeeEeCCCcccc
Q 020757 114 NFFLLRGNHECA 125 (321)
Q Consensus 114 ~v~~LrGNHE~~ 125 (321)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 3556999963
No 99
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.08 E-value=2.3 Score=36.21 Aligned_cols=115 Identities=24% Similarity=0.386 Sum_probs=78.2
Q ss_pred eEEEecCCC--CHHHHHHHHHhCCCCCC-ceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhcc
Q 020757 56 IKICGDVHG--QFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (321)
Q Consensus 56 i~viGDiHG--~~~~L~~il~~~~~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 132 (321)
+.++||+|= ...+|-.-|++.-.|++ .+++++|++. |.|++.+|..+ ...++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l----~~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTL----SSDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhh----CCCcEEEecccCcc-------
Confidence 678999996 44555555665556665 6788999964 67888888666 45899999976653
Q ss_pred chHHHHHHhchhhhhhhccccccCCeEEEE--cC-cEEEecCcCCCCCCCHHHHHcccCCCCCCCcchhhhhhhcCCCCC
Q 020757 133 FYDECKRRFNVRVWKTFTDCFNCLPVAALV--DE-KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKD 209 (321)
Q Consensus 133 f~~e~~~~~~~~~~~~~~~~f~~LPl~~~i--~~-~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dlLWsdP~~~ 209 (321)
..-|..-++ +. ++-|+||-.- +=|+||
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~--- 96 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDP--- 96 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCH---
Confidence 111322222 22 7889998421 225555
Q ss_pred CCCcccCCCCcccccCHHHHHHHHHhCCCceEEEeeeecccCeE
Q 020757 210 IEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 253 (321)
Q Consensus 210 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 253 (321)
+++.-.-+..+++.++-||+..-+.|+
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye 123 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYE 123 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEE
Confidence 356666778899999999998777665
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=91.94 E-value=0.28 Score=45.29 Aligned_cols=64 Identities=19% Similarity=0.187 Sum_probs=35.5
Q ss_pred eEEEecCCCCHHH----------------------HHHHHHhCCCC-CCceE-EEecCccCCCCCcH-----HHHHHHHH
Q 020757 56 IKICGDVHGQFSD----------------------LLRLFEYGGYP-PEANY-LFLGDYVDRGKQSI-----ETICLLLA 106 (321)
Q Consensus 56 i~viGDiHG~~~~----------------------L~~il~~~~~~-~~~~~-vfLGD~VDrG~~s~-----evl~ll~~ 106 (321)
++.++|+||++.. +..+++..... ..+.+ +..||+++..+.+. .++..+-.
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 5678899997433 34455543322 23334 45899998876432 33333332
Q ss_pred HHhhccCCeeEeCCCcccc
Q 020757 107 YKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 107 lk~~~p~~v~~LrGNHE~~ 125 (321)
+ +-.+ +. ||||..
T Consensus 83 ~----g~da-~~-GNHefd 95 (264)
T cd07411 83 L----GVDA-MV-GHWEFT 95 (264)
T ss_pred h----CCeE-Ee-cccccc
Confidence 2 2233 33 999963
No 101
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=91.52 E-value=0.017 Score=56.07 Aligned_cols=204 Identities=12% Similarity=-0.097 Sum_probs=122.8
Q ss_pred CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccchHHHHHHh----chhhhhhhcccccc
Q 020757 80 PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF----NVRVWKTFTDCFNC 155 (321)
Q Consensus 80 ~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~ 155 (321)
+.-..|+++++++++.+.++.+-+.+..+..+-.+.-.+++||+.. ++++.++.-.. ...+++..++-++.
T Consensus 47 d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~ 121 (476)
T KOG0918|consen 47 DYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKP 121 (476)
T ss_pred cceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCcc
Confidence 3456899999999999999999998888888888889999999543 33343332222 23466778888888
Q ss_pred CCeEEEEcCcEEEecCcCCCCCCCHHHHHcccCCC--CCCC-cchhhhhhhcCCCCCCCCcccCCCCcccccCHHH--HH
Q 020757 156 LPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPV--DVPD-QGLLCDLLWADPDKDIEGWGENDRGVSYTFGADK--VV 230 (321)
Q Consensus 156 LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~--~~~~-~~~~~dlLWsdP~~~~~~~~~~~rg~~~~fg~~~--~~ 230 (321)
.+...+.. ++++.||+..|.......+..+.-.. +... ..--..++=+|-.. ...|.. ++....||.+. .-
T Consensus 122 ~l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~-k~tw~~--~~~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 122 SLEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNE-KGTWEK--PGHSPLFGYDFWYQP 197 (476)
T ss_pred ceeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccce-eccccc--CCCccccccceeecc
Confidence 88887755 99999999999764333222211100 0000 01111222122111 112222 22233334332 23
Q ss_pred HHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCC--ceEEEEEe
Q 020757 231 EFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTL--TCSFQILK 294 (321)
Q Consensus 231 ~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~--~~~~~~~~ 294 (321)
+++...+.+...+.|.....+.....++ ++.++.+-|.-...+.++.+.+..+. ...++.++
T Consensus 198 r~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh 261 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLH 261 (476)
T ss_pred ccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeecc
Confidence 3555566666777777654444444555 78888888887788888888887753 23444443
No 102
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=91.06 E-value=0.46 Score=44.46 Aligned_cols=71 Identities=20% Similarity=0.195 Sum_probs=41.6
Q ss_pred eEEEecCCCC---HHHHHHHHHhCCC--CCCceEEEecCccCCCCCcH--H------HHHHHHHHHhhccC-CeeEeCCC
Q 020757 56 IKICGDVHGQ---FSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSI--E------TICLLLAYKVKYKE-NFFLLRGN 121 (321)
Q Consensus 56 i~viGDiHG~---~~~L~~il~~~~~--~~~~~~vfLGD~VDrG~~s~--e------vl~ll~~lk~~~p~-~v~~LrGN 121 (321)
.--.|+-. | +..+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++-.+|. .|+.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 34456554 4 3444555554332 35677889999998876431 1 11222234434443 79999999
Q ss_pred ccccch
Q 020757 122 HECASI 127 (321)
Q Consensus 122 HE~~~~ 127 (321)
||....
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998654
No 103
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=90.66 E-value=0.5 Score=46.56 Aligned_cols=44 Identities=25% Similarity=0.388 Sum_probs=32.7
Q ss_pred CceEEEecCccCCCCCc--HHHHHHHHHHHhhccC----CeeEeCCCccc
Q 020757 81 EANYLFLGDYVDRGKQS--IETICLLLAYKVKYKE----NFFLLRGNHEC 124 (321)
Q Consensus 81 ~~~~vfLGD~VDrG~~s--~evl~ll~~lk~~~p~----~v~~LrGNHE~ 124 (321)
.+..+||||++|-|... -|--....++|-.++. .+..+.||||-
T Consensus 94 PdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 94 PDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 46788999999988754 4444555666666664 78999999996
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=89.76 E-value=0.43 Score=53.38 Aligned_cols=66 Identities=18% Similarity=0.115 Sum_probs=39.6
Q ss_pred CceEEEecCCCCH---HHHHHHHHhCCCCCCceEEE-ecCccCCCCCcH-----HHHHHHHHHHhhccCCeeEeCCCccc
Q 020757 54 APIKICGDVHGQF---SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 54 ~~i~viGDiHG~~---~~L~~il~~~~~~~~~~~vf-LGD~VDrG~~s~-----evl~ll~~lk~~~p~~v~~LrGNHE~ 124 (321)
..|+.++|+||.+ ..+..+++...-...+.+++ .||+++..+.+. .++..+-.+ .--+...||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-----g~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-----GYDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-----CCCEEEeccccc
Confidence 3578899999975 44444555433222334444 799999876542 334443332 223568999997
No 105
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=89.69 E-value=0.42 Score=46.10 Aligned_cols=74 Identities=26% Similarity=0.393 Sum_probs=47.7
Q ss_pred CceEEEecCCCCHHHHHH---HHHhCCCCCCceEEEecCccC-CCCC---cHHH------HHHH---HHHHhhccCCeeE
Q 020757 54 APIKICGDVHGQFSDLLR---LFEYGGYPPEANYLFLGDYVD-RGKQ---SIET------ICLL---LAYKVKYKENFFL 117 (321)
Q Consensus 54 ~~i~viGDiHG~~~~L~~---il~~~~~~~~~~~vfLGD~VD-rG~~---s~ev------l~ll---~~lk~~~p~~v~~ 117 (321)
|+|.|-|=.||.++.+-+ ..++.|-.+-|-++++||+=- |... ++.| +.-. +.=.+.+|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999999874 445556567788999999852 2111 1111 1111 1112345656678
Q ss_pred eCCCccccch
Q 020757 118 LRGNHECASI 127 (321)
Q Consensus 118 LrGNHE~~~~ 127 (321)
+-||||.+..
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999999754
No 106
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=89.44 E-value=0.6 Score=43.64 Aligned_cols=66 Identities=20% Similarity=0.157 Sum_probs=36.2
Q ss_pred ceEEEecCCCCH---------------------HHHHHHHHhCCCC-CCceEEEecCccCCCCCc-----HHHHHHHHHH
Q 020757 55 PIKICGDVHGQF---------------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQS-----IETICLLLAY 107 (321)
Q Consensus 55 ~i~viGDiHG~~---------------------~~L~~il~~~~~~-~~~~~vfLGD~VDrG~~s-----~evl~ll~~l 107 (321)
.++-++|+||++ ..+..+++..... ++.-++-.||+++..+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999875 3344455544322 223344479999876543 2223333222
Q ss_pred HhhccCCeeEeCCCcccc
Q 020757 108 KVKYKENFFLLRGNHECA 125 (321)
Q Consensus 108 k~~~p~~v~~LrGNHE~~ 125 (321)
-. .+ +..||||.-
T Consensus 82 ---g~-D~-~~lGNHefd 94 (281)
T cd07409 82 ---GY-DA-MTLGNHEFD 94 (281)
T ss_pred ---CC-CE-EEecccccc
Confidence 22 33 445999974
No 107
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=87.57 E-value=1.1 Score=41.32 Aligned_cols=56 Identities=23% Similarity=0.135 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHhCCCCCCc-eEEEecCccCCCCCc-----HHHHHHHHHHHhhccCCeeEeCCCccc
Q 020757 64 GQFSDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 64 G~~~~L~~il~~~~~~~~~-~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~LrGNHE~ 124 (321)
|.+..+..+++...-...+ -++..||+++..+.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4467777777765433333 455689999887532 34444444332 23567899996
No 108
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=87.36 E-value=1.1 Score=39.66 Aligned_cols=72 Identities=14% Similarity=0.104 Sum_probs=40.8
Q ss_pred eEEEecCCCC-----HHHHHHHHHhCC-CCCCceEEEecCccCCCCCcH----------HHHHHHHHHHhh-----ccCC
Q 020757 56 IKICGDVHGQ-----FSDLLRLFEYGG-YPPEANYLFLGDYVDRGKQSI----------ETICLLLAYKVK-----YKEN 114 (321)
Q Consensus 56 i~viGDiHG~-----~~~L~~il~~~~-~~~~~~~vfLGD~VDrG~~s~----------evl~ll~~lk~~-----~p~~ 114 (321)
|++++|+|=. ++.|.++|+.+. ...-+.+|++|+++|.-.... .....+..+... .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5778888865 677788888777 555678999999999632211 111111111111 1238
Q ss_pred eeEeCCCccccch
Q 020757 115 FFLLRGNHECASI 127 (321)
Q Consensus 115 v~~LrGNHE~~~~ 127 (321)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998654
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=87.28 E-value=1.3 Score=41.25 Aligned_cols=67 Identities=16% Similarity=0.149 Sum_probs=46.9
Q ss_pred CceEEEecCCCC--HHHHHHHHHhCCCC-CCceEEEecCccCCC-CCcHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 54 APIKICGDVHGQ--FSDLLRLFEYGGYP-PEANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 54 ~~i~viGDiHG~--~~~L~~il~~~~~~-~~~~~vfLGD~VDrG-~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
|+|.++|||=|. ...+...|..+... +.+-+|..||....| .-+-++...|..+ .-.++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 689999999999 45566666654433 235566689999766 4567777777644 4466666 999985
No 110
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=86.75 E-value=27 Score=32.47 Aligned_cols=47 Identities=21% Similarity=0.343 Sum_probs=29.4
Q ss_pred ceEEEeeeecccCeEEec--CCeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEE
Q 020757 239 DLICRAHQVVEDGYEFFA--KRQLVTVFSAPNYCGEFDNAGAMMSVD-DTLTCSF 290 (321)
Q Consensus 239 ~~iIrgH~~~~~G~~~~~--~~~~iTifSa~~y~~~~~n~ga~l~i~-~~~~~~~ 290 (321)
..++.|||+. -|.+... +++-+.+.|.|.|.. .|.++.+| +++++..
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~ 254 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEP 254 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEE
Confidence 4578899986 4555442 256677888898853 55566565 3455443
No 111
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=84.01 E-value=1.3 Score=45.18 Aligned_cols=68 Identities=26% Similarity=0.247 Sum_probs=40.9
Q ss_pred cCceEEEecCCCCHH------------HHHH---HHHhCCCCCCceE-EEecCccCCCCC------cHHHHHHHHHHHhh
Q 020757 53 EAPIKICGDVHGQFS------------DLLR---LFEYGGYPPEANY-LFLGDYVDRGKQ------SIETICLLLAYKVK 110 (321)
Q Consensus 53 ~~~i~viGDiHG~~~------------~L~~---il~~~~~~~~~~~-vfLGD~VDrG~~------s~evl~ll~~lk~~ 110 (321)
+-.|+-..|+||++. -+.+ ++++..-.....+ |=.||+++..+- ....+.+|-.++.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y- 104 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY- 104 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC-
Confidence 456888999999998 3333 3332222222333 337999998433 2345555555542
Q ss_pred ccCCeeEeCCCcccc
Q 020757 111 YKENFFLLRGNHECA 125 (321)
Q Consensus 111 ~p~~v~~LrGNHE~~ 125 (321)
=....||||.-
T Consensus 105 ----Da~tiGNHEFd 115 (517)
T COG0737 105 ----DAMTLGNHEFD 115 (517)
T ss_pred ----cEEeecccccc
Confidence 25778999984
No 112
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.35 E-value=2.3 Score=42.43 Aligned_cols=69 Identities=23% Similarity=0.375 Sum_probs=52.2
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCCC--CCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCc
Q 020757 53 EAPIKICGDVHGQFSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNH 122 (321)
Q Consensus 53 ~~~i~viGDiHG~~~~L~~il~~~~~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNH 122 (321)
+.+|.|+||+-|+++.|.+-.+...-. |-+-++++|++.+-..++.|++.+..-. ...|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 468999999999999998776654432 4588999999999877888887665433 34566777777765
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=81.94 E-value=1.9 Score=40.50 Aligned_cols=66 Identities=18% Similarity=0.109 Sum_probs=36.4
Q ss_pred ceEEEecCCCCHHH-------------HHHH---HHh-CCC-CCCceEEEecCccCCCCCc-------HHHHHHHHHHHh
Q 020757 55 PIKICGDVHGQFSD-------------LLRL---FEY-GGY-PPEANYLFLGDYVDRGKQS-------IETICLLLAYKV 109 (321)
Q Consensus 55 ~i~viGDiHG~~~~-------------L~~i---l~~-~~~-~~~~~~vfLGD~VDrG~~s-------~evl~ll~~lk~ 109 (321)
.|+-+.|+||++.. +.++ ++. ... .++.-++..||.++.-+.+ .-++.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 57888999998641 2222 221 111 1223345589999865433 1123333333
Q ss_pred hccCCeeEeCCCcccc
Q 020757 110 KYKENFFLLRGNHECA 125 (321)
Q Consensus 110 ~~p~~v~~LrGNHE~~ 125 (321)
.-=.+..||||.-
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 2346789999994
No 114
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=80.94 E-value=2.6 Score=40.57 Aligned_cols=73 Identities=21% Similarity=0.179 Sum_probs=43.8
Q ss_pred CceEEEecCCCCHH-----------------HHHH--HHH-hCCCCCCceEEEecCccCCCCCc---HHHHHHHHHHHhh
Q 020757 54 APIKICGDVHGQFS-----------------DLLR--LFE-YGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVK 110 (321)
Q Consensus 54 ~~i~viGDiHG~~~-----------------~L~~--il~-~~~~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~ 110 (321)
-+|+.+.|+|=... |+.. .++ .+.....+-+||+||.|+. ... ..+++-..+=.+.
T Consensus 54 fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~ 132 (379)
T KOG1432|consen 54 FKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAID 132 (379)
T ss_pred eEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhh
Confidence 36899999996544 2111 111 1222345789999999986 322 3333333333344
Q ss_pred ccCCeeEeCCCccccch
Q 020757 111 YKENFFLLRGNHECASI 127 (321)
Q Consensus 111 ~p~~v~~LrGNHE~~~~ 127 (321)
+.-....+.||||....
T Consensus 133 ~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 133 RKIPWAAVLGNHDDESD 149 (379)
T ss_pred cCCCeEEEecccccccc
Confidence 44567899999998644
No 115
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=80.30 E-value=1.7 Score=40.68 Aligned_cols=15 Identities=33% Similarity=0.297 Sum_probs=12.2
Q ss_pred CCCceEEEeeeeccc
Q 020757 236 HDLDLICRAHQVVED 250 (321)
Q Consensus 236 ~~~~~iIrgH~~~~~ 250 (321)
.+++.||-||+-...
T Consensus 208 ~giD~IigGHsH~~~ 222 (285)
T cd07405 208 GGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCCEEEeCCCCccc
Confidence 589999999987643
No 116
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=78.79 E-value=3.1 Score=39.63 Aligned_cols=64 Identities=20% Similarity=0.071 Sum_probs=37.0
Q ss_pred eEEEecCCCCHH------HHHHHHHhCCC-----CCCceEEEecCccCCCCC-------------cHHHHHHHHHHHhhc
Q 020757 56 IKICGDVHGQFS------DLLRLFEYGGY-----PPEANYLFLGDYVDRGKQ-------------SIETICLLLAYKVKY 111 (321)
Q Consensus 56 i~viGDiHG~~~------~L~~il~~~~~-----~~~~~~vfLGD~VDrG~~-------------s~evl~ll~~lk~~~ 111 (321)
|+-+.|+||++. .+..+++.... .++.-++..||.+..++. ..-++.+|-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 567899999953 33333443211 233445568999876543 223344444443
Q ss_pred cCCeeEeCCCccc
Q 020757 112 KENFFLLRGNHEC 124 (321)
Q Consensus 112 p~~v~~LrGNHE~ 124 (321)
-=.+..||||.
T Consensus 80 --~Da~tlGNHEF 90 (313)
T cd08162 80 --VQAIALGNHEF 90 (313)
T ss_pred --CcEEecccccc
Confidence 23577999996
No 117
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=77.75 E-value=3.1 Score=43.75 Aligned_cols=68 Identities=16% Similarity=0.101 Sum_probs=41.4
Q ss_pred ecCceEEEecCCCCHHH----------------HHHHHHhCCC-CCCceEEEecCccCCCCCcH-------------HHH
Q 020757 52 LEAPIKICGDVHGQFSD----------------LLRLFEYGGY-PPEANYLFLGDYVDRGKQSI-------------ETI 101 (321)
Q Consensus 52 ~~~~i~viGDiHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDrG~~s~-------------evl 101 (321)
+..+|.-..|+||++.. +..+++...- .++.-+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45678889999998643 3333443321 13344556899998766431 144
Q ss_pred HHHHHHHhhccCCeeEeCCCccc
Q 020757 102 CLLLAYKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 102 ~ll~~lk~~~p~~v~~LrGNHE~ 124 (321)
..+-.+. -=....||||.
T Consensus 104 ~amN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHHHhcC-----CcEEeccchhh
Confidence 4444443 33678999996
No 118
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=77.59 E-value=5.8 Score=36.79 Aligned_cols=66 Identities=17% Similarity=0.125 Sum_probs=42.4
Q ss_pred ceEEEecCCCCHH--HHHHHHHhCCCC-CCceEEEecCccCCC-CCcHHHHHHHHHHHhhccCCeeEeCCCcccc
Q 020757 55 PIKICGDVHGQFS--DLLRLFEYGGYP-PEANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 55 ~i~viGDiHG~~~--~L~~il~~~~~~-~~~~~vfLGD~VDrG-~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
++.+||||=|... .+.+.|....-. +.+-+|..||..-.| .-+-++...|..+- -.+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 5789999999743 345555544322 234455579998766 36777777776553 345555 999864
No 119
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=77.49 E-value=1.7 Score=43.32 Aligned_cols=41 Identities=24% Similarity=0.385 Sum_probs=33.9
Q ss_pred ceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccch
Q 020757 82 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 127 (321)
Q Consensus 82 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~ 127 (321)
+++=.+||+-||||++-.+++-|..+ + .+-+--||||...+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc----c-cccccccCcceEEe
Confidence 56778999999999999999888754 2 67788999998554
No 120
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=76.92 E-value=3.3 Score=43.32 Aligned_cols=66 Identities=18% Similarity=0.078 Sum_probs=38.5
Q ss_pred CceEEEecCCCCHHH----------------HHHHHHhCCCC-CCceEEEecCccCCCCCcH-------------HHHHH
Q 020757 54 APIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-------------ETICL 103 (321)
Q Consensus 54 ~~i~viGDiHG~~~~----------------L~~il~~~~~~-~~~~~vfLGD~VDrG~~s~-------------evl~l 103 (321)
-+|.-..|+||++.. +..+++...-. ++.-+|-.||.+...+.+- -++..
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 357788999999643 33344433211 2344555899998655431 23344
Q ss_pred HHHHHhhccCCeeEeCCCccc
Q 020757 104 LLAYKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 104 l~~lk~~~p~~v~~LrGNHE~ 124 (321)
|-.+. -=....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 43332 23578999996
No 121
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.43 E-value=3.7 Score=46.09 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=16.5
Q ss_pred HHHHHHHHHh-CCCceEEEeeeec
Q 020757 226 ADKVVEFLQK-HDLDLICRAHQVV 248 (321)
Q Consensus 226 ~~~~~~fl~~-~~~~~iIrgH~~~ 248 (321)
+++..+..++ -+++.||-||+-.
T Consensus 256 en~~~~la~~~~gID~Il~GHsH~ 279 (1163)
T PRK09419 256 EDSVYDLAEKTKGIDAIVAGHQHG 279 (1163)
T ss_pred chHHHHHHHhCCCCcEEEeCCCcc
Confidence 4455566645 4899999999754
No 122
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=74.00 E-value=11 Score=35.59 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=48.5
Q ss_pred CceEEEecCCC----CHHHHHHHHHhCC-CCC----CceEEEecCccCCC----CCc----HHHHHHHHHH-Hhhcc---
Q 020757 54 APIKICGDVHG----QFSDLLRLFEYGG-YPP----EANYLFLGDYVDRG----KQS----IETICLLLAY-KVKYK--- 112 (321)
Q Consensus 54 ~~i~viGDiHG----~~~~L~~il~~~~-~~~----~~~~vfLGD~VDrG----~~s----~evl~ll~~l-k~~~p--- 112 (321)
..++|+||+|= .++.|.++|+... ..+ ..-+||+|+++.+. ..+ .|-+.-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 46899999995 5788888888762 212 35689999999763 222 2334444432 22445
Q ss_pred --CCeeEeCCCccccc
Q 020757 113 --ENFFLLRGNHECAS 126 (321)
Q Consensus 113 --~~v~~LrGNHE~~~ 126 (321)
.++++|.|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 58999999999753
No 123
>PF14164 YqzH: YqzH-like protein
Probab=71.97 E-value=16 Score=26.60 Aligned_cols=47 Identities=23% Similarity=0.427 Sum_probs=38.6
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 020757 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPN 48 (321)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ep~ 48 (321)
||+..|+++|.+-++-- .......+|++.|...|+......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QY-g~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQY-GYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHh-CCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 88889999888887754 233456689999999999999999999885
No 124
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=71.81 E-value=6.2 Score=40.54 Aligned_cols=68 Identities=21% Similarity=0.076 Sum_probs=35.8
Q ss_pred cCceEEEecCCCCHHH----------HHHHHHhCC-----CCCCceEEEecCccCCCCCc-----HHHHHHHHHHHhhcc
Q 020757 53 EAPIKICGDVHGQFSD----------LLRLFEYGG-----YPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYK 112 (321)
Q Consensus 53 ~~~i~viGDiHG~~~~----------L~~il~~~~-----~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p 112 (321)
+-.|+-+.|+||++.. +..+++... ..++.-++.-||.+...+.+ .-++.++-.+ .
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~----g 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI----G 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC----C
Confidence 4568889999998742 223333321 12333455579998643322 1122333322 2
Q ss_pred CCeeEeCCCcccc
Q 020757 113 ENFFLLRGNHECA 125 (321)
Q Consensus 113 ~~v~~LrGNHE~~ 125 (321)
-.+ ...||||.-
T Consensus 110 ~Da-~tlGNHEFD 121 (551)
T PRK09558 110 YDA-MAVGNHEFD 121 (551)
T ss_pred CCE-EcccccccC
Confidence 233 445999974
No 125
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=69.09 E-value=7.1 Score=42.12 Aligned_cols=67 Identities=21% Similarity=0.130 Sum_probs=39.1
Q ss_pred cCceEEEecCCCCHHHH----------------HHHHHhCCC-CCCceEEEecCccCCCCCcH--------------HHH
Q 020757 53 EAPIKICGDVHGQFSDL----------------LRLFEYGGY-PPEANYLFLGDYVDRGKQSI--------------ETI 101 (321)
Q Consensus 53 ~~~i~viGDiHG~~~~L----------------~~il~~~~~-~~~~~~vfLGD~VDrG~~s~--------------evl 101 (321)
+-+|+-..|+||++... ..+++...- .++.-+|-.||.+...+.+- -++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 34578899999996432 223333221 13344556899998655321 144
Q ss_pred HHHHHHHhhccCCeeEeCCCccc
Q 020757 102 CLLLAYKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 102 ~ll~~lk~~~p~~v~~LrGNHE~ 124 (321)
..|-.|. -=....||||.
T Consensus 195 ~amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 195 AALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHHhccC-----CCEEEechhhc
Confidence 4444443 33678999996
No 126
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=68.75 E-value=8.7 Score=39.53 Aligned_cols=65 Identities=23% Similarity=0.101 Sum_probs=36.2
Q ss_pred eEEEecCCCCHHH---------------------HHHHHHhCCC-CCCceEEEecCccCCCCCc-----HHHHHHHHHHH
Q 020757 56 IKICGDVHGQFSD---------------------LLRLFEYGGY-PPEANYLFLGDYVDRGKQS-----IETICLLLAYK 108 (321)
Q Consensus 56 i~viGDiHG~~~~---------------------L~~il~~~~~-~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk 108 (321)
|+-+.|+||++.. +..+++...- .++.-++..||.+...+.+ ...+.++-++
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~- 81 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA- 81 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc-
Confidence 5667888887543 2333333221 2334455689999765433 2223333333
Q ss_pred hhccCCeeEeCCCcccc
Q 020757 109 VKYKENFFLLRGNHECA 125 (321)
Q Consensus 109 ~~~p~~v~~LrGNHE~~ 125 (321)
.--....||||.-
T Consensus 82 ----g~Da~~lGNHEFd 94 (550)
T TIGR01530 82 ----GFDFFTLGNHEFD 94 (550)
T ss_pred ----CCCEEEecccccc
Confidence 2346789999963
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=68.68 E-value=10 Score=37.46 Aligned_cols=72 Identities=8% Similarity=0.040 Sum_probs=40.1
Q ss_pred CceEEEecCCC-CHHHH--HHHHHhCC-CCCCceEEEecCccCCCCCcHH------HHHHHHHHHh-hccCCeeEeCCCc
Q 020757 54 APIKICGDVHG-QFSDL--LRLFEYGG-YPPEANYLFLGDYVDRGKQSIE------TICLLLAYKV-KYKENFFLLRGNH 122 (321)
Q Consensus 54 ~~i~viGDiHG-~~~~L--~~il~~~~-~~~~~~~vfLGD~VDrG~~s~e------vl~ll~~lk~-~~p~~v~~LrGNH 122 (321)
-+++++||-=+ .+... .+.+.... -.+.+-+|-+||-++.|..++. .+.-++.-.- .-.-..+++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 36899999543 22221 12233222 2344566779999888877543 2333332111 0112689999999
Q ss_pred ccc
Q 020757 123 ECA 125 (321)
Q Consensus 123 E~~ 125 (321)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 128
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=64.52 E-value=45 Score=29.63 Aligned_cols=85 Identities=16% Similarity=0.263 Sum_probs=62.7
Q ss_pred ceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccchhhhccch----------------HHHHHHhchhh
Q 020757 82 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY----------------DECKRRFNVRV 145 (321)
Q Consensus 82 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 145 (321)
..+||+|- |-+.-|.+.++-+++-+|..+-++ .|+-|.+..++...|. .|..+.|-...
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 56899985 889999999999999888877665 8999998887654442 23333344456
Q ss_pred hhhhccccccCCeEEEEcCcEEEecC
Q 020757 146 WKTFTDCFNCLPVAALVDEKILCMHG 171 (321)
Q Consensus 146 ~~~~~~~f~~LPl~~~i~~~il~vHg 171 (321)
|..+.....++++...+-.+++.+.|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 77777777778777776667777776
No 129
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=64.26 E-value=9.1 Score=35.90 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=41.6
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccC-CeeEeCCCccccc
Q 020757 55 PIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKE-NFFLLRGNHECAS 126 (321)
Q Consensus 55 ~i~viGDiHG~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~-~v~~LrGNHE~~~ 126 (321)
+.+.|+|.|+...+.. ..++.|.++-+||+-.-|. +-||..+=- .--..|. .=+.|+||||.-.
T Consensus 63 r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~-~~gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 63 RFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNE-WLGSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred EEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhH-HhccCcceeeEEEeeccceee
Confidence 5899999999766553 3567788899999977554 444443321 1112231 3468999999853
No 130
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=64.08 E-value=18 Score=33.25 Aligned_cols=88 Identities=25% Similarity=0.331 Sum_probs=44.8
Q ss_pred ceEEEecCcc-CCCCC---cHHHHHHHHHHHhh-------ccCCeeEeCCCccccchhhhccchHHHHHHh-chhhhhhh
Q 020757 82 ANYLFLGDYV-DRGKQ---SIETICLLLAYKVK-------YKENFFLLRGNHECASINRIYGFYDECKRRF-NVRVWKTF 149 (321)
Q Consensus 82 ~~~vfLGD~V-DrG~~---s~evl~ll~~lk~~-------~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~ 149 (321)
+..+||||=. ||-.. ..=++.+|-++.-+ -.++|++|-||||.- .++.|.-.-. ..+. ..+-|
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein-~ngny~arla-nhkls~gDTY--- 160 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEIN-FNGNYMARLA-NHKLSAGDTY--- 160 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceec-cCchHHHHHh-hCCCCccchh---
Confidence 4467777754 23110 11234444444331 235899999999984 2322221100 0111 11222
Q ss_pred ccccccCCeEEEEc-CcEEEecCcCCC
Q 020757 150 TDCFNCLPVAALVD-EKILCMHGGLSP 175 (321)
Q Consensus 150 ~~~f~~LPl~~~i~-~~il~vHgGi~p 175 (321)
..+..+|.+-.-. .+++..|-||-.
T Consensus 161 -nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 161 -NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred -hccccccccccCcchhhhhcccCcee
Confidence 3346677775532 368889999864
No 131
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=61.39 E-value=11 Score=37.67 Aligned_cols=34 Identities=9% Similarity=0.107 Sum_probs=26.3
Q ss_pred HHHHHHHHhCCCceEEEeeeecccCeEEecCCeE
Q 020757 227 DKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQL 260 (321)
Q Consensus 227 ~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~ 260 (321)
..++..+-++++++++-||.-.=+....-.|.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3699999999999999999876566554455444
No 132
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=59.80 E-value=29 Score=35.62 Aligned_cols=52 Identities=21% Similarity=0.186 Sum_probs=39.9
Q ss_pred cCceEEEecCCC------------CHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHH
Q 020757 53 EAPIKICGDVHG------------QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLL 104 (321)
Q Consensus 53 ~~~i~viGDiHG------------~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll 104 (321)
..+|.|..|.|= .|..|..+|+.+.-..-+-++.-||+++-..-|.++|.-.
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~ 76 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRC 76 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHH
Confidence 467899999983 4788999999876666677777899998877776665443
No 133
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=55.61 E-value=16 Score=39.37 Aligned_cols=68 Identities=18% Similarity=0.111 Sum_probs=39.0
Q ss_pred ecCceEEEecCCCCHHH----------------HHHHHHhCCC-CCCceEEEecCccCCCCCc-----------------
Q 020757 52 LEAPIKICGDVHGQFSD----------------LLRLFEYGGY-PPEANYLFLGDYVDRGKQS----------------- 97 (321)
Q Consensus 52 ~~~~i~viGDiHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDrG~~s----------------- 97 (321)
+.-+|+-..|+||++.. +..++++... .++.-+|-.||++-..+.+
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 34568899999998632 2233333221 1334455689998654332
Q ss_pred --HHHHHHHHHHHhhccCCeeEeCCCccc
Q 020757 98 --IETICLLLAYKVKYKENFFLLRGNHEC 124 (321)
Q Consensus 98 --~evl~ll~~lk~~~p~~v~~LrGNHE~ 124 (321)
.-++.+|-.|. -=....||||.
T Consensus 118 ~~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccC-----CCEEecccccc
Confidence 12444444333 23578999995
No 134
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=52.57 E-value=16 Score=34.35 Aligned_cols=68 Identities=24% Similarity=0.346 Sum_probs=42.2
Q ss_pred CceEEEecC--CCCHHHHHHHHHhCCCC---CCceEEEecCcc-CCCCCc---------HHHHHHHHHHHhhccCCeeEe
Q 020757 54 APIKICGDV--HGQFSDLLRLFEYGGYP---PEANYLFLGDYV-DRGKQS---------IETICLLLAYKVKYKENFFLL 118 (321)
Q Consensus 54 ~~i~viGDi--HG~~~~L~~il~~~~~~---~~~~~vfLGD~V-DrG~~s---------~evl~ll~~lk~~~p~~v~~L 118 (321)
-+++||||- +|.|..-+-.++..... +.+-++-+||=+ |-|..+ .|-+.---+|+ ...+.+
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ----kpWy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ----KPWYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc----cchhhh
Confidence 468999994 88888776666653332 235566689966 556544 33322222221 267899
Q ss_pred CCCcccc
Q 020757 119 RGNHECA 125 (321)
Q Consensus 119 rGNHE~~ 125 (321)
.||||.+
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
Confidence 9999986
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=51.35 E-value=14 Score=38.42 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=34.3
Q ss_pred eEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCccccch
Q 020757 83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 127 (321)
Q Consensus 83 ~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~ 127 (321)
++-.+||+.||||.+-.+++.|+.. .+|=+--||||...+
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWM 226 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWM 226 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHH
Confidence 6778999999999999999999844 378889999998555
No 136
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=42.40 E-value=89 Score=23.41 Aligned_cols=70 Identities=14% Similarity=0.092 Sum_probs=45.3
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCC--CCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCCCc
Q 020757 53 EAPIKICGDVHGQFSDLLRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNH 122 (321)
Q Consensus 53 ~~~i~viGDiHG~~~~L~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrGNH 122 (321)
...+.||=|---|.+.+..+++.+. ++....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 11 ~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 11 PNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp ETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3457788886668888888777653 234566778999999888887766666555555566655555554
No 137
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=37.74 E-value=1.4e+02 Score=25.59 Aligned_cols=58 Identities=17% Similarity=0.258 Sum_probs=40.9
Q ss_pred EEEecCCCCHHHHHHHHHh-CCC------------CCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeE
Q 020757 57 KICGDVHGQFSDLLRLFEY-GGY------------PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFL 117 (321)
Q Consensus 57 ~viGDiHG~~~~L~~il~~-~~~------------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~ 117 (321)
++.+-.+||-..+.+.+.. ++- .....+||+|=.+|+|.-+-++..+|-.|+ +.+|++
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~l 72 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVAL 72 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEE
Confidence 5666678887777665432 222 133579999999999999999999988764 445543
No 138
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.42 E-value=89 Score=30.19 Aligned_cols=61 Identities=21% Similarity=0.372 Sum_probs=41.3
Q ss_pred HHhhCCCeeeecCceEEEecCC-CCHHHHHHHHHhCCCCCCceEEE-ecCccC--CCCCcHHHHHHHHHHHhh
Q 020757 42 IFLSQPNLLELEAPIKICGDVH-GQFSDLLRLFEYGGYPPEANYLF-LGDYVD--RGKQSIETICLLLAYKVK 110 (321)
Q Consensus 42 ~l~~ep~~l~~~~~i~viGDiH-G~~~~L~~il~~~~~~~~~~~vf-LGD~VD--rG~~s~evl~ll~~lk~~ 110 (321)
-++.-|..+.-.+.+.|+||.| |||.++.. .+..++| +-|+=. -|++-..++.+..+|.+.
T Consensus 45 ~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a 109 (410)
T COG4320 45 DMKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLA 109 (410)
T ss_pred HHhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHHH
Confidence 3456676777678899999999 78887643 2223444 666521 277888888888887653
No 139
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=29.42 E-value=1.6e+02 Score=29.28 Aligned_cols=67 Identities=10% Similarity=0.056 Sum_probs=46.5
Q ss_pred cCceEEEecCCC-CHHHHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhcc-CCeeEeCC
Q 020757 53 EAPIKICGDVHG-QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYK-ENFFLLRG 120 (321)
Q Consensus 53 ~~~i~viGDiHG-~~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p-~~v~~LrG 120 (321)
...++||=|-+. +.+.+...|+.+...+..+++.+||+...|+++.+.-.-+..+-.... +.++++ |
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 345788999666 678888877765433446788999999999999887766655444333 444433 5
No 140
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=29.18 E-value=20 Score=29.88 Aligned_cols=83 Identities=27% Similarity=0.398 Sum_probs=44.9
Q ss_pred cCCCCHHHHHHHHHhCCCCCCceE--EEecCccCCCCCcHHHHHHHHHHHhhccCCeeE--eCCCccccchhhhccchHH
Q 020757 61 DVHGQFSDLLRLFEYGGYPPEANY--LFLGDYVDRGKQSIETICLLLAYKVKYKENFFL--LRGNHECASINRIYGFYDE 136 (321)
Q Consensus 61 DiHG~~~~L~~il~~~~~~~~~~~--vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~--LrGNHE~~~~~~~~gf~~e 136 (321)
|+.|++..|.+.|+.+++|..-.+ +-.|| +.-.+-++-..-+.|+..|.- +.=++|. ...
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l~~~g~eL---------~~k 64 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLLVDRGYEL---------YGK 64 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHHHHcCchh---------hcC
Confidence 899999999999999999843211 22343 222222222222345533322 2222221 122
Q ss_pred HHHHhchhhhhhhccccccCCeE
Q 020757 137 CKRRFNVRVWKTFTDCFNCLPVA 159 (321)
Q Consensus 137 ~~~~~~~~~~~~~~~~f~~LPl~ 159 (321)
-..++-+.+|+.+.+.|.+-|..
T Consensus 65 ~D~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 65 NDLRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCC
Confidence 22344556777777778777755
No 141
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=26.36 E-value=51 Score=30.76 Aligned_cols=39 Identities=26% Similarity=0.473 Sum_probs=24.4
Q ss_pred eEEEecCccCCCCCcHHHH-HHHHHHHhhccCCeeEeCCCcccc
Q 020757 83 NYLFLGDYVDRGKQSIETI-CLLLAYKVKYKENFFLLRGNHECA 125 (321)
Q Consensus 83 ~~vfLGD~VDrG~~s~evl-~ll~~lk~~~p~~v~~LrGNHE~~ 125 (321)
+++|+||+|.+ ...+++ ..|-.+|..++..+.+. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999954 333333 45666777777655444 44554
No 142
>PLN00084 photosystem II subunit S (PsbS); Provisional
Probab=24.04 E-value=46 Score=28.96 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=25.6
Q ss_pred ecCccCCCCCcHHHHHHHHHHH-------hhccCCeeEeCCCccc
Q 020757 87 LGDYVDRGKQSIETICLLLAYK-------VKYKENFFLLRGNHEC 124 (321)
Q Consensus 87 LGD~VDrG~~s~evl~ll~~lk-------~~~p~~v~~LrGNHE~ 124 (321)
+||.|.||.-++|-|.--..+. +-+|+++.++. ||=.
T Consensus 9 vgdvvtrg~gp~eql~de~~~igahassvlfhpprftlv~-nhvn 52 (214)
T PLN00084 9 VGDVVTRGAGPLEQLRDEEMFIGAHASSVLFHPPRFTLVM-NHIN 52 (214)
T ss_pred hhhhhccCCCcHHHhhhhHHHhhhcccccccCCccchhhh-ccCC
Confidence 6999999999999876543332 23666766655 7743
No 143
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=24.04 E-value=1.3e+02 Score=27.53 Aligned_cols=39 Identities=21% Similarity=0.442 Sum_probs=31.5
Q ss_pred CHHHHHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecC
Q 020757 225 GADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSA 266 (321)
Q Consensus 225 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa 266 (321)
....+.+||+.+|.. .-+|++..||.|+.++-+|+||--
T Consensus 139 ~~~~~~~fl~~lGy~---~~~Eyv~~G~~F~~g~i~I~l~ri 177 (250)
T PF09637_consen 139 TSGSLLSFLNELGYR---FDYEYVVEGYRFFKGDIVIELFRI 177 (250)
T ss_dssp SSSSHHHHHHHTTEE---EEEEEEEEEEEEEECCEEEEEEEE
T ss_pred CCCCHHHHHHHcCCc---eEEEEEEEEEEEEECCEEEEEEEE
Confidence 456788999999954 468999999999998877777653
No 144
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=23.63 E-value=2.4e+02 Score=19.17 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhh
Q 020757 3 ETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLS 45 (321)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~ 45 (321)
.+.+++++++|-+.. ++-++...+.+++..+++.
T Consensus 5 ~~~Le~Iv~~Le~~~---------~sLdes~~lyeeg~~l~~~ 38 (53)
T PF02609_consen 5 MERLEEIVEKLESGE---------LSLDESLKLYEEGMELIKK 38 (53)
T ss_dssp HHHHHHHHHHHHTT----------S-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC---------CCHHHHHHHHHHHHHHHHH
Confidence 356888999997764 7888999999988888764
No 145
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=23.39 E-value=1.2e+02 Score=27.10 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=25.7
Q ss_pred ccCHHHHHHHHHhCCCceEEEeeeecccCe
Q 020757 223 TFGADKVVEFLQKHDLDLICRAHQVVEDGY 252 (321)
Q Consensus 223 ~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~ 252 (321)
.+|...+.+++++.+++++|.||.-...+.
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~~ 224 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFGP 224 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCCC
Confidence 578889999999999999999998876543
No 146
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=22.35 E-value=37 Score=34.24 Aligned_cols=56 Identities=20% Similarity=0.261 Sum_probs=38.3
Q ss_pred HHHHHHHHHhCCCc----eEEEeeeecccCe--E-EecCCeEEEEec--CCCCCCCCCCcEEEEE
Q 020757 226 ADKVVEFLQKHDLD----LICRAHQVVEDGY--E-FFAKRQLVTVFS--APNYCGEFDNAGAMMS 281 (321)
Q Consensus 226 ~~~~~~fl~~~~~~----~iIrgH~~~~~G~--~-~~~~~~~iTifS--a~~y~~~~~n~ga~l~ 281 (321)
++..++.|+..|++ .||-||+|+.++- . .-++||+|.|-. |..|...+.=+|--|.
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAYqs~TgiAGYTll 579 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAYQSTTGIAGYTLL 579 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhhhcccccceeEee
Confidence 45577899999987 8999999987543 2 357899998833 2336555444554443
No 147
>PF12976 DUF3860: Domain of Unknown Function with PDB structure (DUF3860); InterPro: IPR024619 This protein family includes hypothetical protein (JCVI_PEP_1096688149193) whose crystal structure has been solved PDB:2OD5. The hypothetical protein is from an environmental metagenome (unidentified marine microbe).
Probab=21.85 E-value=2.8e+02 Score=20.99 Aligned_cols=17 Identities=41% Similarity=0.675 Sum_probs=15.2
Q ss_pred CChhHHHHHHHHHHhcc
Q 020757 1 MDETVLDDIIRRLLDAK 17 (321)
Q Consensus 1 ~~~~~~~~~i~~~~~~~ 17 (321)
|+.+.+.++|.+.++.+
T Consensus 1 M~s~~LR~~Ir~~L~ER 17 (92)
T PF12976_consen 1 MDSQNLRDLIRNYLSER 17 (92)
T ss_pred CchhHHHHHHHHHHhcC
Confidence 88899999999999876
No 148
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=21.81 E-value=3.3e+02 Score=21.33 Aligned_cols=41 Identities=17% Similarity=0.442 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCCCCceEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeE
Q 020757 68 DLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFL 117 (321)
Q Consensus 68 ~L~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~ 117 (321)
.+.++++. -|+.++|++||= |..-.|+..-+. ..+|++|..
T Consensus 54 ~i~~i~~~---fP~~kfiLIGDs---gq~DpeiY~~ia---~~~P~~i~a 94 (100)
T PF09949_consen 54 NIERILRD---FPERKFILIGDS---GQHDPEIYAEIA---RRFPGRILA 94 (100)
T ss_pred HHHHHHHH---CCCCcEEEEeeC---CCcCHHHHHHHH---HHCCCCEEE
Confidence 34445543 356778888873 666677765543 347776654
No 149
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=20.91 E-value=89 Score=28.92 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=24.4
Q ss_pred eEEEecCccCCCCCcHHHHHHHHHHHhhccCCeeEeCC
Q 020757 83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRG 120 (321)
Q Consensus 83 ~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~LrG 120 (321)
+++|+||+|.+.-.. -+...|-.+|.+++..+++.-|
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEECC
Confidence 479999999875433 2345667777777766555444
No 150
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.67 E-value=3.1e+02 Score=22.69 Aligned_cols=57 Identities=23% Similarity=0.183 Sum_probs=37.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCccCCCCCc--------HHHHHHHHHHHhhccCCeeEe---CCCcccc
Q 020757 66 FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS--------IETICLLLAYKVKYKENFFLL---RGNHECA 125 (321)
Q Consensus 66 ~~~L~~il~~~~~~~~~~~vfLGD~VDrG~~s--------~evl~ll~~lk~~~p~~v~~L---rGNHE~~ 125 (321)
++.|.+.++..+....-.++|+|+-.|++-+| ..|+.- ++| .+|..+++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~--alk-~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINE--ALK-HAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHH--HHH-hCCCceEEEEEEecCCCcc
Confidence 67788888877665555678999999998666 233322 233 578776665 4776664
No 151
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=20.59 E-value=4.3e+02 Score=25.79 Aligned_cols=77 Identities=18% Similarity=0.223 Sum_probs=0.0
Q ss_pred HHHHHHHHhhCCCeeeecCceEEEecCC--CCHHH-----HHHHHHhCCCCCCceEEEecCc-----------cCCCCCc
Q 020757 36 CAASKEIFLSQPNLLELEAPIKICGDVH--GQFSD-----LLRLFEYGGYPPEANYLFLGDY-----------VDRGKQS 97 (321)
Q Consensus 36 ~~~a~~~l~~ep~~l~~~~~i~viGDiH--G~~~~-----L~~il~~~~~~~~~~~vfLGD~-----------VDrG~~s 97 (321)
++++.+.++..+ ...++|+|+.- |+++. +.+++..... +.+++.||- +..-...
T Consensus 312 ~~~al~~l~~~~-----~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~---d~vi~~g~~~~~~~~~~~~~~~~~~~~ 383 (417)
T TIGR01143 312 MRAALDALARFP-----GKKILVLGDMAELGEYSEELHAEVGRYANSLGI---DLVFLVGEEAAVIYDSLGCKGFHFADK 383 (417)
T ss_pred HHHHHHHHHhCC-----CCEEEEEcCchhcChHHHHHHHHHHHHHHHcCC---CEEEEECHHHHHHHHhcccCcEEECCH
Q ss_pred HHHHHHHHHHHhhccCCeeEeCCCc
Q 020757 98 IETICLLLAYKVKYKENFFLLRGNH 122 (321)
Q Consensus 98 ~evl~ll~~lk~~~p~~v~~LrGNH 122 (321)
-+++..+. +...|..++++.|.+
T Consensus 384 ~~~~~~l~--~~~~~~d~VLlkGSr 406 (417)
T TIGR01143 384 DELLAFLK--LELGEGDVVLVKGSR 406 (417)
T ss_pred HHHHHHHH--HhcCCCCEEEEEeCC
No 152
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=20.04 E-value=2.1e+02 Score=25.62 Aligned_cols=40 Identities=20% Similarity=0.332 Sum_probs=28.8
Q ss_pred HHHHHHhCCCceEEEeeeecccCeEEecCCeEEEEecCCCCC
Q 020757 229 VVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYC 270 (321)
Q Consensus 229 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~iTifSa~~y~ 270 (321)
+.+.|-..|+++||-||.-+..+++... +++| +||-=|+.
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~~~-~~~I-~YslGNfi 236 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEIYK-GKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEEEC-CEEE-EEcccccc
Confidence 4444444799999999999988998764 4555 67765553
Done!