BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020759
MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL
LRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDI
AQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADL
RDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWME
IAQVEKLQQGPSQPFYQLLRRICWLLTNQTWQGLIIPIFLSCFTGRIQLEISSQSSSCER
STTGLDMKFPQIQKMRSCSNA

High Scoring Gene Products

Symbol, full name Information P value
AT2G03390 protein from Arabidopsis thaliana 4.3e-70
FBXO21
Uncharacterized protein 		protein from Gallus gallus 3.2e-05
FBXO21
F-box only protein 21 		protein from Homo sapiens 0.00066
fbxo21
F-box protein 21 		gene_product from Danio rerio 0.00085
FBXO21
F-box only protein 21 		protein from Homo sapiens 0.00090
Fbxo21
F-box protein 21 		gene from Rattus norvegicus 0.00096

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020759
        (321 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2063761 - symbol:AT2G03390 species:3702 "Arabi...   710  4.3e-70   1
UNIPROTKB|F1NDZ7 - symbol:FBXO21 "Uncharacterized protein...   121  3.2e-05   2
UNIPROTKB|H0YHF6 - symbol:FBXO21 "F-box only protein 21" ...   109  0.00066   1
ZFIN|ZDB-GENE-100922-229 - symbol:fbxo21 "F-box protein 2...   115  0.00085   1
UNIPROTKB|H0YIE9 - symbol:FBXO21 "F-box only protein 21" ...   109  0.00090   2
RGD|1307346 - symbol:Fbxo21 "F-box protein 21" species:10...   110  0.00096   2


>TAIR|locus:2063761 [details] [associations]
            symbol:AT2G03390 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0004518 "nuclease
            activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006289 "nucleotide-excision repair" evidence=IEA;ISS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] InterPro:IPR001943
            InterPro:IPR011722 Pfam:PF02151 Pfam:PF08755 SMART:SM00992
            GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
            SUPFAM:SSF141255 TIGRFAMs:TIGR02097 EMBL:AK176535 EMBL:AK176569
            IPI:IPI00541632 RefSeq:NP_178438.2 UniGene:At.41397
            ProteinModelPortal:Q67Y99 SMR:Q67Y99 PaxDb:Q67Y99 PRIDE:Q67Y99
            EnsemblPlants:AT2G03390.1 GeneID:814868 KEGG:ath:AT2G03390
            TAIR:At2g03390 eggNOG:NOG131964 HOGENOM:HOG000238301
            InParanoid:Q67Y99 OMA:YNRPRHE PhylomeDB:Q67Y99
            ProtClustDB:CLSN2681138 Genevestigator:Q67Y99 Uniprot:Q67Y99
        Length = 330

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 157/261 (60%), Positives = 181/261 (69%)

Query:     1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQ-GLHLRVTFN 59
             MVQ  SLSTLT  G+     S  L  R   +   S IG DR C   QF++     R  + 
Sbjct:     1 MVQSQSLSTLTICGSVKV--SSLLRNRLNSVKASSLIG-DR-CVSCQFLRKSPSFRSHWK 56

Query:    60 LLRQRNL-RANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
              L+QRNL R  A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ A+N+E+Y
Sbjct:    57 SLKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 116

Query:   119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
             DIAQQLR KLTEVEEE  R  E KRG S+KSEAQDK +SIIRLRADLQ AIDSE+Y LAA
Sbjct:   117 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 176

Query:   179 DLRDQICKXXXXXXXXXXXXXXXXXXRFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
              LRD+I K                   +AFRLGQK+ HK FGYRAV+CGMDP+C ESSSW
Sbjct:   177 KLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPICSESSSW 236

Query:   239 MEIAQVEKLQQGPSQPFYQLL 259
             ME A+VEKL +G +QPFYQ+L
Sbjct:   237 MEAAEVEKLPRGSNQPFYQVL 257


>UNIPROTKB|F1NDZ7 [details] [associations]
            symbol:FBXO21 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001810 InterPro:IPR011722 Pfam:PF08755 SMART:SM00992
            GO:GO:0003677 SUPFAM:SSF81383 OMA:LNSYIHQ SUPFAM:SSF141255
            TIGRFAMs:TIGR02097 GeneTree:ENSGT00390000005653 EMBL:AADN02050456
            IPI:IPI00585471 Ensembl:ENSGALT00000013355 Uniprot:F1NDZ7
        Length = 612

 Score = 121 (47.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
 Identities = 22/52 (42%), Positives = 27/52 (51%)

Query:   208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
             F +G  + HK +GY  VI G DP C     W+    V  L  GP QPFY +L
Sbjct:   477 FSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLPHGPHQPFYNVL 528

 Score = 48 (22.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query:   139 LEAKRGLSSKSEAQDKALSIIR-------LRADLQKAIDSENYALAADLRDQIC 185
             +E ++GL+ K  A+ K L  +R       L+  LQ+  D +++   A L DQ C
Sbjct:   137 MEGRKGLTWKYYAK-KILYFLRQQNILKNLKEYLQRPADQQSFLEGAVLIDQYC 189


>UNIPROTKB|H0YHF6 [details] [associations]
            symbol:FBXO21 "F-box only protein 21" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR011722
            Pfam:PF08755 SMART:SM00992 GO:GO:0003677 EMBL:AC026368
            EMBL:AC026364 HGNC:HGNC:13592 SUPFAM:SSF141255 TIGRFAMs:TIGR02097
            Ensembl:ENST00000548840 Bgee:H0YHF6 Uniprot:H0YHF6
        Length = 225

 Score = 109 (43.4 bits), Expect = 0.00066, P = 0.00066
 Identities = 20/52 (38%), Positives = 26/52 (50%)

Query:   208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
             + +G  + HK +GY  VI G DP C     W+    V  L  G  QPFY +L
Sbjct:   155 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 206


>ZFIN|ZDB-GENE-100922-229 [details] [associations]
            symbol:fbxo21 "F-box protein 21" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001810 InterPro:IPR011722 Pfam:PF08755 SMART:SM00256
            SMART:SM00992 ZFIN:ZDB-GENE-100922-229 GO:GO:0003677
            SUPFAM:SSF81383 SUPFAM:SSF141255 TIGRFAMs:TIGR02097
            GeneTree:ENSGT00390000005653 EMBL:AL935185 EMBL:CT583689
            IPI:IPI00613856 Ensembl:ENSDART00000111359 Bgee:E9QEU7
            Uniprot:E9QEU7
        Length = 611

 Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
 Identities = 22/52 (42%), Positives = 28/52 (53%)

Query:   208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
             F  G  + HK  GY  VI G DP C  S  W+   +V +L +G  QPFY +L
Sbjct:   496 FSTGLIMKHKRSGYNCVIYGWDPKCTMSQEWINTMRVHQLSKGADQPFYNVL 547


>UNIPROTKB|H0YIE9 [details] [associations]
            symbol:FBXO21 "F-box only protein 21" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR011722
            Pfam:PF08755 SMART:SM00992 GO:GO:0003677 EMBL:AC026368
            EMBL:AC026364 HGNC:HGNC:13592 SUPFAM:SSF141255 TIGRFAMs:TIGR02097
            Ensembl:ENST00000550180 Uniprot:H0YIE9
        Length = 505

 Score = 109 (43.4 bits), Expect = 0.00090, Sum P(2) = 0.00090
 Identities = 20/52 (38%), Positives = 26/52 (50%)

Query:   208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
             + +G  + HK +GY  VI G DP C     W+    V  L  G  QPFY +L
Sbjct:   380 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 431

 Score = 45 (20.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query:   152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
             Q K L+   L+A LQ+  D E+Y   A   DQ C
Sbjct:   119 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 150


>RGD|1307346 [details] [associations]
            symbol:Fbxo21 "F-box protein 21" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR011722 Pfam:PF08755 SMART:SM00992 RGD:1307346
            GO:GO:0003677 SUPFAM:SSF141255 TIGRFAMs:TIGR02097
            GeneTree:ENSGT00390000005653 IPI:IPI00870497
            Ensembl:ENSRNOT00000064900 UCSC:RGD:1307346 ArrayExpress:F1M5Q6
            Uniprot:F1M5Q6
        Length = 572

 Score = 110 (43.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
 Identities = 20/52 (38%), Positives = 26/52 (50%)

Query:   208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
             + +G  + HK +GY  VI G DP C     W+    V  L  G  QPFY +L
Sbjct:   448 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 499

 Score = 45 (20.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query:   152 QDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
             Q K L+   L+A LQ+  D E+Y   A   DQ C
Sbjct:   127 QQKILN--NLKAFLQQPDDYESYLEGAVYIDQYC 158


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      321       285   0.00085  115 3  11 22  0.44    33
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  213 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.26u 0.10s 24.36t   Elapsed:  00:00:01
  Total cpu time:  24.26u 0.10s 24.36t   Elapsed:  00:00:01
  Start:  Fri May 10 07:19:58 2013   End:  Fri May 10 07:19:59 2013

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