BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020759
(321 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/261 (71%), Positives = 214/261 (81%), Gaps = 2/261 (0%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGLHLRVTF 58
MVQ +S+STLTTSGNGG YGS ALW RHF+L+ K++I G +R H Q L
Sbjct: 1 MVQCVSVSTLTTSGNGGVYGSTALWGRHFQLMRKTQIRTGSERNFLWHHCAQRLFFAGQL 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
+ RQRNLR AGWLFKGG D+GLDASSE SESANEDIL FFFQLDLATRVQ ALN E+Y
Sbjct: 61 VMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQY 120
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQQLR+KLTEVE E+ +Q EAKRG +SKSEAQDKALS+IRLRADLQKAI++ENYALAA
Sbjct: 121 EIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAA 180
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
+LRD+I KLEAESLAASA AL +EN +AFRLGQKV HK+FGY AVICGMDPVCCESSSW
Sbjct: 181 ELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICGMDPVCCESSSW 240
Query: 239 MEIAQVEKLQQGPSQPFYQLL 259
E A V+KL +G +QPFYQ+L
Sbjct: 241 RESAHVDKLTRGSNQPFYQVL 261
>gi|225423547|ref|XP_002274826.1| PREDICTED: uncharacterized protein LOC100266199 [Vitis vinifera]
gi|297738051|emb|CBI27252.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/261 (71%), Positives = 214/261 (81%), Gaps = 2/261 (0%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGLHLRVTF 58
MVQ +S+STLTTSGNGG YGS ALW RHF+L+ K++I G +R H Q L
Sbjct: 1 MVQCVSVSTLTTSGNGGVYGSTALWGRHFQLMRKTQIRTGSERNFLWHHCAQRLFFAGQL 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
+ RQRNLR AGWLFKGG D+GLDASSE SESANEDIL FFFQLDLATRVQ ALN E+Y
Sbjct: 61 VMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQY 120
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQQLR+KLTEVE E+ +Q EAKRG +SKSEAQDKALS+IRLRADLQKAI++ENYALAA
Sbjct: 121 EIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAA 180
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
+LRD+I KLEAESLAASA AL +EN +AFRLGQKV HK+FGY AVICGMDPVCCESSSW
Sbjct: 181 ELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICGMDPVCCESSSW 240
Query: 239 MEIAQVEKLQQGPSQPFYQLL 259
E A V+KL +G +QPFYQ+L
Sbjct: 241 RESAHVDKLTRGSNQPFYQVL 261
>gi|255542114|ref|XP_002512121.1| DNA binding protein, putative [Ricinus communis]
gi|223549301|gb|EEF50790.1| DNA binding protein, putative [Ricinus communis]
Length = 336
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/262 (70%), Positives = 207/262 (79%), Gaps = 7/262 (2%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWR-RHFKLLEKSR--IGIDRPCFCHQFVQGLHLRVT 57
MVQ LSL+ LT S N G S WR RHFKL+ ++ GIDR HQ VQ L+
Sbjct: 1 MVQNLSLNALTVSRNCGICVSLPSWRGRHFKLVRRTHNAFGIDR----HQLVQSLYFMGN 56
Query: 58 FNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEE 117
NL R RNLR AGWLF G ++ +AS ERSESANEDIL FFFQLDLATRVQ ALN E+
Sbjct: 57 PNLSRHRNLRVEAGWLFNRGGNQESEASCERSESANEDILIFFFQLDLATRVQYALNTEQ 116
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALA 177
YDIAQQLRNKLTEVE E+ RQ EAKRG SSKSEAQDKALSIIRLRADLQ AI++ENYA+A
Sbjct: 117 YDIAQQLRNKLTEVEAEVIRQQEAKRGSSSKSEAQDKALSIIRLRADLQNAIENENYAMA 176
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSS 237
A LRDQI KLEAESLAAS ALA+ENA++AFRLGQKV HK FGY+AV+CGMDPVCCESSS
Sbjct: 177 AQLRDQISKLEAESLAASVNALAYENAQYAFRLGQKVTHKTFGYQAVVCGMDPVCCESSS 236
Query: 238 WMEIAQVEKLQQGPSQPFYQLL 259
WME AQVEKL +G +QPFYQ+L
Sbjct: 237 WMETAQVEKLSRGSNQPFYQVL 258
>gi|449452875|ref|XP_004144184.1| PREDICTED: uncharacterized protein LOC101203572 [Cucumis sativus]
Length = 336
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/261 (61%), Positives = 197/261 (75%), Gaps = 3/261 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIG--IDRPCFCHQFVQGLHLRVTF 58
MVQ LS+ +T G+ YGS WRR+FK +++ + R CF HQ ++ L
Sbjct: 1 MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++ + + AGWLFKGG ERSE+AN DIL FFFQLDLATRVQ ALN+E+Y
Sbjct: 61 RRSKRGSFKIRAGWLFKGGGQES-GGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 119
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQ+LR KLTEVE E+ +Q E+K+GL+SKSE QDK L+IIRLRADLQKA++SENYALAA
Sbjct: 120 EIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAA 179
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
LRD+I KLE +SLAASA LA+E+A ++FRLGQKV HKIFGYR VICGMDPVCCESSSW
Sbjct: 180 QLRDEISKLETDSLAASAKVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSW 239
Query: 239 MEIAQVEKLQQGPSQPFYQLL 259
MEIAQVEKL +G +QPFYQ+L
Sbjct: 240 MEIAQVEKLSRGSNQPFYQVL 260
>gi|356499859|ref|XP_003518753.1| PREDICTED: uncharacterized protein LOC100794023 [Glycine max]
Length = 327
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/261 (67%), Positives = 206/261 (78%), Gaps = 9/261 (3%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGID--RPCFCHQFVQGLHLRVTF 58
MVQV+SLSTL T GN GS W F+ ++S+I R + VQ L L
Sbjct: 1 MVQVVSLSTLATCGNSRLCGSSPSWMAPFEPYKRSQITSSNGRHLVWNNSVQSLFL---- 56
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
R + RA A W+F+GG ++GLDASSE SESANEDIL FFFQLDLATRVQ ALNME+Y
Sbjct: 57 --TRHSDFRAEAAWMFRGG-EQGLDASSEHSESANEDILMFFFQLDLATRVQYALNMEQY 113
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIA+QLRNKL EVEEE+ +Q ++KRGLSSK EAQDKA+SIIRLR+DLQKAI++E+YALAA
Sbjct: 114 DIAKQLRNKLAEVEEEVIKQQQSKRGLSSKGEAQDKAISIIRLRSDLQKAIENEDYALAA 173
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
+LRD+I KLEAESLAASATALA ENA++AFRLGQKV HK FGYRAVICGMDPVC ESSSW
Sbjct: 174 ELRDEISKLEAESLAASATALAHENAQYAFRLGQKVRHKKFGYRAVICGMDPVCSESSSW 233
Query: 239 MEIAQVEKLQQGPSQPFYQLL 259
ME AQV+KL +G +QPFYQ+L
Sbjct: 234 MENAQVKKLSRGSAQPFYQVL 254
>gi|42568906|ref|NP_178438.2| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
gi|51971212|dbj|BAD44298.1| unknown protein [Arabidopsis thaliana]
gi|51971335|dbj|BAD44332.1| unknown protein [Arabidopsis thaliana]
gi|330250601|gb|AEC05695.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
Length = 330
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/260 (64%), Positives = 193/260 (74%), Gaps = 4/260 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R ++ S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSVKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYD 119
L+QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ A+N+E+YD
Sbjct: 58 LKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQYD 117
Query: 120 IAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAAD 179
IAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE+Y LAA
Sbjct: 118 IAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAAK 177
Query: 180 LRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWM 239
LRD+I KLEAESLA SA ALAFE A +AFRLGQK+ HK FGYRAV+CGMDP+C ESSSWM
Sbjct: 178 LRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPICSESSSWM 237
Query: 240 EIAQVEKLQQGPSQPFYQLL 259
E A+VEKL +G +QPFYQ+L
Sbjct: 238 EAAEVEKLPRGSNQPFYQVL 257
>gi|297817996|ref|XP_002876881.1| hypothetical protein ARALYDRAFT_904615 [Arabidopsis lyrata subsp.
lyrata]
gi|297322719|gb|EFH53140.1| hypothetical protein ARALYDRAFT_904615 [Arabidopsis lyrata subsp.
lyrata]
Length = 331
Score = 313 bits (802), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/261 (64%), Positives = 194/261 (74%), Gaps = 5/261 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R + S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSSKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGS-DRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ A+N+E+Y
Sbjct: 58 IKQRNLLRVEARWPFQGGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 117
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE+Y LAA
Sbjct: 118 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 177
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
LRD+I KLEAESLA SA ALAFENA +AFRLGQK+ HK FGYRAV+CGMDP+CCESSSW
Sbjct: 178 KLRDEISKLEAESLAVSAKALAFENAEYAFRLGQKLRHKTFGYRAVVCGMDPICCESSSW 237
Query: 239 MEIAQVEKLQQGPSQPFYQLL 259
ME A+VEKL +G +QPFYQ+L
Sbjct: 238 MEAAEVEKLPRGSNQPFYQVL 258
>gi|357487407|ref|XP_003613991.1| F-box only protein [Medicago truncatula]
gi|355515326|gb|AES96949.1| F-box only protein [Medicago truncatula]
Length = 300
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/287 (60%), Positives = 215/287 (74%), Gaps = 13/287 (4%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGL-HLRVT 57
MVQ +SLSTL T G YGSP F+ ++S I + ++ V+ L +
Sbjct: 1 MVQGVSLSTLATCGKSRIYGSP------FEPFKQSHITSSTGKHLVWNKCVKSLVFIGYP 54
Query: 58 FNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEE 117
F ++ + AGW+F+GG ++ LDAS E+SESANEDIL FFFQLDLATRVQCALNMEE
Sbjct: 55 FASRQRSGFKVEAGWMFRGG-EQELDASVEQSESANEDILMFFFQLDLATRVQCALNMEE 113
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALA 177
YDIA+QLRNKLTEVEEE+ +Q ++KRG+SSKSEAQDKALS+IRLR+DLQ AI++E+YALA
Sbjct: 114 YDIAKQLRNKLTEVEEEVIKQKQSKRGMSSKSEAQDKALSVIRLRSDLQSAIENEDYALA 173
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSS 237
A LRD+I KLEAESLAASA ALA ENA++ FRLGQKV HK+FGYRA+I GMDPVC ESSS
Sbjct: 174 AKLRDEISKLEAESLAASAKALAHENAQYVFRLGQKVKHKMFGYRAIIVGMDPVCSESSS 233
Query: 238 WMEIAQVEKLQQGPSQPFYQLL---RRICWLLTNQTWQGLIIPIFLS 281
WME AQV+KL +G +QPFYQ+L R LL GL+ P++++
Sbjct: 234 WMENAQVKKLSRGTAQPFYQVLVDVRAEPDLLVAYGKAGLVGPVWMT 280
>gi|356494893|ref|XP_003516316.1| PREDICTED: uncharacterized protein LOC100783767 [Glycine max]
Length = 303
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 151/201 (75%), Positives = 175/201 (87%), Gaps = 2/201 (0%)
Query: 60 LLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDIL-FFFFQLDLATRVQCALNMEEY 118
L R RA A W+F+GG ++GLD SSE SESANEDIL FFFFQLDLATRVQ ALNME+Y
Sbjct: 31 LTRHSGFRAEAAWMFRGG-EQGLDVSSEHSESANEDILMFFFFQLDLATRVQYALNMEQY 89
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIA+QLRNKL EVEEE+ +Q ++KRGLSSKSEAQDKA+SIIRL +DLQ AI++E+YALAA
Sbjct: 90 DIAKQLRNKLAEVEEEVIKQQQSKRGLSSKSEAQDKAISIIRLHSDLQNAIENEHYALAA 149
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
+LRD+I KLEAESLAASA ALA ENA++AFRLGQKV HK FGY+AVICGMDPVC ESSSW
Sbjct: 150 ELRDEISKLEAESLAASAKALAHENAQYAFRLGQKVRHKKFGYKAVICGMDPVCSESSSW 209
Query: 239 MEIAQVEKLQQGPSQPFYQLL 259
ME AQV+KL +G +QPFYQ+L
Sbjct: 210 MENAQVKKLSRGSAQPFYQVL 230
>gi|125527819|gb|EAY75933.1| hypothetical protein OsI_03852 [Oryza sativa Indica Group]
gi|125572130|gb|EAZ13645.1| hypothetical protein OsJ_03562 [Oryza sativa Japonica Group]
Length = 275
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/195 (71%), Positives = 164/195 (84%), Gaps = 3/195 (1%)
Query: 66 LRANAGWLFKGGSDRGL-DASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQL 124
+R NA WLF GG DR +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+QL
Sbjct: 5 VRTNAKWLF-GGDDRSSSNARLERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQL 63
Query: 125 RNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQI 184
R KLTE+E EI RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+I
Sbjct: 64 REKLTEIETEIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDEI 122
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
KLE ESLA SA ALA++N +AFRLGQKV HK+ GYRAVICGMDPVCCES SWME A V
Sbjct: 123 AKLETESLAVSAKALAYQNVEYAFRLGQKVRHKVHGYRAVICGMDPVCCESKSWMETANV 182
Query: 245 EKLQQGPSQPFYQLL 259
E L +GP+QPFYQ+L
Sbjct: 183 ENLSKGPNQPFYQVL 197
>gi|413952331|gb|AFW84980.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
gi|413952332|gb|AFW84981.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
gi|413952333|gb|AFW84982.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 334
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/235 (62%), Positives = 176/235 (74%), Gaps = 12/235 (5%)
Query: 35 SRIGIDRPCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDA 84
+R + PC + QGLH + N R+ N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDA 82
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG 144
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG
Sbjct: 83 RLERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG 142
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENA 204
S K+EAQDKAL++IR+RADLQKAIDSENYALAA LRD I KLE ESLA SA ALA++N
Sbjct: 143 -SPKTEAQDKALNLIRVRADLQKAIDSENYALAAGLRDDIAKLEVESLAVSAKALAYQNV 201
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
++AFRLGQKV H I GYR VICGMDPVCCES SWME A VEKL +GP+QPFYQ+L
Sbjct: 202 KYAFRLGQKVRHNIHGYRGVICGMDPVCCESKSWMETANVEKLSKGPNQPFYQVL 256
>gi|115475007|ref|NP_001061100.1| Os08g0172200 [Oryza sativa Japonica Group]
gi|40253874|dbj|BAD05809.1| unknown protein [Oryza sativa Japonica Group]
gi|113623069|dbj|BAF23014.1| Os08g0172200 [Oryza sativa Japonica Group]
Length = 334
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 167/211 (79%), Gaps = 2/211 (0%)
Query: 49 VQGLHLRVTFNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATR 108
V+ LH+R + +R NA WLF G +A ERSESANEDIL F+FQLDL TR
Sbjct: 48 VKKLHMRTNRRQM-GTTVRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTR 106
Query: 109 VQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKA 168
+Q ALN+E++D+A+QLR KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA
Sbjct: 107 IQYALNIEQFDVAKQLREKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKA 165
Query: 169 IDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGM 228
+DSENYALAA LRD+I KLE ESLA SA ALA++N ++AFRLGQKV HK+ GYRAVICGM
Sbjct: 166 VDSENYALAAALRDEIAKLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICGM 225
Query: 229 DPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
D VCCES SWME A VE L +GP+QPFYQ+L
Sbjct: 226 DHVCCESKSWMETANVENLSKGPNQPFYQVL 256
>gi|357136589|ref|XP_003569886.1| PREDICTED: uncharacterized protein LOC100832648 [Brachypodium
distachyon]
Length = 337
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 169/213 (79%), Gaps = 5/213 (2%)
Query: 51 GLHLRVTFNLLRQRN-LRANAGWLFKG---GSDRGLDASSERSESANEDILFFFFQLDLA 106
G L N R N +R NA WLF G S+ +A ERSESANEDIL F+FQLDL
Sbjct: 48 GEKLHKKINSRRVGNTVRTNARWLFGGDGRNSNSNANARLERSESANEDILIFYFQLDLQ 107
Query: 107 TRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQ 166
TR+Q ALN+E++D A+QLR KLTE+E EI+RQ EAKRG SSK+EAQDK+++++R+RADLQ
Sbjct: 108 TRIQYALNIEQFDAAKQLREKLTEIETEITRQREAKRG-SSKNEAQDKSINLLRVRADLQ 166
Query: 167 KAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVIC 226
KAI+SENYALAA+LRD I KLE ESLA SA ALA++N ++ FRLGQKV HK+ GYRAVIC
Sbjct: 167 KAIESENYALAAELRDAIAKLEGESLALSAKALAYQNVKYEFRLGQKVRHKVHGYRAVIC 226
Query: 227 GMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
GMDPVCCES SWME A VEKL +GP+QPFYQ+L
Sbjct: 227 GMDPVCCESKSWMETANVEKLSKGPNQPFYQVL 259
>gi|218200550|gb|EEC82977.1| hypothetical protein OsI_27993 [Oryza sativa Indica Group]
Length = 275
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/194 (69%), Positives = 160/194 (82%), Gaps = 1/194 (0%)
Query: 66 LRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLR 125
+R NA WLF G +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+QLR
Sbjct: 5 VRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQLR 64
Query: 126 NKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+I
Sbjct: 65 EKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDEIA 123
Query: 186 KLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVE 245
KLE ESLA SA ALA++N ++AFRLGQKV HK+ GYRAVICGMD VCCES SWME A VE
Sbjct: 124 KLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICGMDHVCCESKSWMETANVE 183
Query: 246 KLQQGPSQPFYQLL 259
L +GP+QPFYQ+L
Sbjct: 184 NLSKGPNQPFYQVL 197
>gi|222639995|gb|EEE68127.1| hypothetical protein OsJ_26212 [Oryza sativa Japonica Group]
Length = 275
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/194 (69%), Positives = 160/194 (82%), Gaps = 1/194 (0%)
Query: 66 LRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLR 125
+R NA WLF G +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+QLR
Sbjct: 5 VRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQLR 64
Query: 126 NKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQIC 185
KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+I
Sbjct: 65 EKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDEIA 123
Query: 186 KLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVE 245
KLE ESLA SA ALA++N ++AFRLGQKV HK+ GYRAVICGMD VCCES SWME A VE
Sbjct: 124 KLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICGMDHVCCESKSWMETANVE 183
Query: 246 KLQQGPSQPFYQLL 259
L +GP+QPFYQ+L
Sbjct: 184 NLSKGPNQPFYQVL 197
>gi|326495156|dbj|BAJ85674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 339
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 165/216 (76%), Gaps = 7/216 (3%)
Query: 49 VQGLHLRVTFNLLRQRNLRANAGWLFKG-----GSDRGLDASSERSESANEDILFFFFQL 103
+ LH+R + +R NA W F G SD A ERSESANEDIL F+FQL
Sbjct: 48 AEKLHVRTDRRKMNT-TVRTNARWFFGGDARNSNSDGNAKARLERSESANEDILIFYFQL 106
Query: 104 DLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRA 163
D+ TR+Q ALN+E++D A+QLR KL E+E EI+RQ EAKRG SSK+EAQDK+L+++R A
Sbjct: 107 DVQTRIQYALNIEQFDAAKQLREKLAEMETEINRQREAKRG-SSKNEAQDKSLNLLRACA 165
Query: 164 DLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRA 223
DLQKAI+SENYALAA+LRD I KLE +SLA SA ALA+++ ++ FRLGQKV HK+ GYRA
Sbjct: 166 DLQKAIESENYALAAELRDTIAKLEGDSLALSAKALAYQSVKYEFRLGQKVRHKVHGYRA 225
Query: 224 VICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
VICGMDPVCCES SWME A VEKL +GP+QPFYQ+L
Sbjct: 226 VICGMDPVCCESKSWMETANVEKLSKGPNQPFYQVL 261
>gi|148906096|gb|ABR16207.1| unknown [Picea sitchensis]
Length = 340
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 140/226 (61%), Positives = 177/226 (78%), Gaps = 5/226 (2%)
Query: 36 RIGIDRPCFCHQFVQGLHLRVTFNLLRQR-NLRANAGWLFKGGSDRGLDASSERSESANE 94
RI ++R H+ LH + ++ QR LR A + KG +D + A SE SESANE
Sbjct: 37 RISLNRRH--HELSHALHFSLMSSVDSQRRGLRVIAAGMSKG-NDPTVTAISECSESANE 93
Query: 95 DILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG-LSSKSEAQD 153
DIL FFFQLDL TR+QCALN ++Y+IAQQLR+KL EVE+E++RQ E+K G SSK EAQD
Sbjct: 94 DILLFFFQLDLTTRIQCALNSDQYEIAQQLRSKLAEVEQEVARQRESKMGSTSSKDEAQD 153
Query: 154 KALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQK 213
KA++I+RLR DLQKAI+ E+YA AA+LR++I KLEA+SLAA+A ALA++NA +AFRLGQK
Sbjct: 154 KAIAILRLRTDLQKAIEDEDYAYAAELRNKISKLEADSLAAAAKALAYQNAEYAFRLGQK 213
Query: 214 VNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
V H IFGYRAVICGMDP+CCESSSW+E A V+KL +G +QPFYQ+L
Sbjct: 214 VRHAIFGYRAVICGMDPLCCESSSWIENANVDKLSRGRNQPFYQVL 259
>gi|297818002|ref|XP_002876884.1| hypothetical protein ARALYDRAFT_322643 [Arabidopsis lyrata subsp.
lyrata]
gi|297322722|gb|EFH53143.1| hypothetical protein ARALYDRAFT_322643 [Arabidopsis lyrata subsp.
lyrata]
Length = 220
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/147 (76%), Positives = 127/147 (86%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSE 172
+N+E+YDIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE
Sbjct: 1 MNLEQYDIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSE 60
Query: 173 NYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVC 232
+Y LAA LRD+I KLEAESLA SA ALAFENA +AFRLGQK+ HK FGYRAV+CGMDP+C
Sbjct: 61 DYGLAAKLRDEISKLEAESLAVSAKALAFENAEYAFRLGQKLRHKTFGYRAVVCGMDPIC 120
Query: 233 CESSSWMEIAQVEKLQQGPSQPFYQLL 259
CESSSWME A+VEKL +G +QPFYQ+L
Sbjct: 121 CESSSWMEAAEVEKLPRGSNQPFYQVL 147
>gi|334184123|ref|NP_001189504.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
gi|4335771|gb|AAD17448.1| unknown protein [Arabidopsis thaliana]
gi|330250602|gb|AEC05696.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/147 (74%), Positives = 125/147 (85%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSE 172
+N+E+YDIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE
Sbjct: 1 MNLEQYDIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSE 60
Query: 173 NYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVC 232
+Y LAA LRD+I KLEAESLA SA ALAFE A +AFRLGQK+ HK FGYRAV+CGMDP+C
Sbjct: 61 DYGLAAKLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPIC 120
Query: 233 CESSSWMEIAQVEKLQQGPSQPFYQLL 259
ESSSWME A+VEKL +G +QPFYQ+L
Sbjct: 121 SESSSWMEAAEVEKLPRGSNQPFYQVL 147
>gi|413952334|gb|AFW84983.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 218
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 141/195 (72%), Gaps = 12/195 (6%)
Query: 35 SRIGIDRPCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDA 84
+R + PC + QGLH + N R+ N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDA 82
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG 144
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG
Sbjct: 83 RLERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG 142
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENA 204
S K+EAQDKAL++IR+RADLQKAIDSENYALAA LRD I KLE ESLA SA ALA++N
Sbjct: 143 -SPKTEAQDKALNLIRVRADLQKAIDSENYALAAGLRDDIAKLEVESLAVSAKALAYQNV 201
Query: 205 RFAFRLGQKVNHKIF 219
++AFRLGQKV H I
Sbjct: 202 KYAFRLGQKVRHNIH 216
>gi|226528204|ref|NP_001146614.1| uncharacterized protein LOC100280211 [Zea mays]
gi|219888031|gb|ACL54390.1| unknown [Zea mays]
Length = 218
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 140/195 (71%), Gaps = 12/195 (6%)
Query: 35 SRIGIDRPCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDA 84
+R + PC + QGLH + N R+ N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDA 82
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG 144
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG
Sbjct: 83 RLERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG 142
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENA 204
S K+EAQDKAL++IR+RADLQKAIDSENYA AA LRD I KLE ESLA SA ALA++N
Sbjct: 143 -SPKTEAQDKALNLIRVRADLQKAIDSENYASAAGLRDDIAKLEVESLAVSAKALAYQNV 201
Query: 205 RFAFRLGQKVNHKIF 219
++AFRLGQKV H I
Sbjct: 202 KYAFRLGQKVRHNIH 216
>gi|302793464|ref|XP_002978497.1| hypothetical protein SELMODRAFT_56554 [Selaginella moellendorffii]
gi|300153846|gb|EFJ20483.1| hypothetical protein SELMODRAFT_56554 [Selaginella moellendorffii]
Length = 241
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 136/179 (75%), Gaps = 3/179 (1%)
Query: 82 LDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEA 141
L E SES NE++L+F FQLDLATR+Q ALN + YD AQ +R K+++VE+E+S+ E
Sbjct: 1 LSPKDEYSESVNEELLYFLFQLDLATRLQRALNQDHYDAAQAIREKISQVEKEVSKLREK 60
Query: 142 KRG-LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALA 200
K G +S+K+EAQDK ++++R R++L +I+ E+Y A L+D+I KLE+ESLAAS ALA
Sbjct: 61 KAGAVSAKNEAQDKEIALLRFRSELSASIEREDYEGARQLKDKISKLESESLAASVRALA 120
Query: 201 FENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
++N ++AFRLGQKV HK+FGYR V+CGMDPVCCES W + A+V Q +QPFYQ+L
Sbjct: 121 YQNVKYAFRLGQKVRHKLFGYRGVVCGMDPVCCESEKWCDRARV--YDQRKNQPFYQVL 177
>gi|449531615|ref|XP_004172781.1| PREDICTED: F-box only protein 21-like, partial [Cucumis sativus]
Length = 179
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/103 (78%), Positives = 93/103 (90%)
Query: 157 SIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNH 216
+IIRLRADLQKA++SENYALAA LRD+I KLE +SLAASA LA+E+A ++FRLGQKV H
Sbjct: 1 NIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVLAYESAEYSFRLGQKVRH 60
Query: 217 KIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
KIFGYR VICGMDPVCCESSSWMEIAQVEKL +G +QPFYQ+L
Sbjct: 61 KIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVL 103
>gi|302773998|ref|XP_002970416.1| hypothetical protein SELMODRAFT_93877 [Selaginella moellendorffii]
gi|300161932|gb|EFJ28546.1| hypothetical protein SELMODRAFT_93877 [Selaginella moellendorffii]
Length = 215
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 113/148 (76%), Gaps = 3/148 (2%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG-LSSKSEAQDKALSIIRLRADLQKAIDS 171
LN + YD AQ +R K+++VE+E+S+ E K G +S+K+EAQDK ++++R R++L +I+
Sbjct: 1 LNQDHYDAAQAIREKISQVEKEVSKLREKKAGAVSAKNEAQDKEIALLRFRSELAASIER 60
Query: 172 ENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPV 231
E+Y A L+D+I KLE+ESLAAS ALA++N ++AFRLGQKV HK+FGYR VICGMDPV
Sbjct: 61 EDYEGARQLKDKISKLESESLAASVRALAYQNVKYAFRLGQKVRHKLFGYRGVICGMDPV 120
Query: 232 CCESSSWMEIAQVEKLQQGPSQPFYQLL 259
CCES W + A+V Q +QPFYQ+L
Sbjct: 121 CCESEKWCDRARV--YDQRKNQPFYQVL 146
>gi|168037572|ref|XP_001771277.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677366|gb|EDQ63837.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 217
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGL-SSKSEAQDKALSIIRLRADLQKAIDSENYAL 176
Y+ AQ LR K+ EVE+E++RQ +AK G SSK+E QD ++I++L+A+LQ+ I E+YA
Sbjct: 2 YEAAQGLREKIAEVEQEMARQRKAKTGSDSSKNEVQDTGIAILQLKAELQRLIAEEDYAA 61
Query: 177 AADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESS 236
A +R+++ LEAESLAA AL+++ F FRLGQKV H++ GYR V+CGMDPVCCES
Sbjct: 62 AGAIRNKLTALEAESLAAQVQALSYQQRSFQFRLGQKVRHRVIGYRGVVCGMDPVCCESD 121
Query: 237 SWMEIAQVEKLQQGPSQPFYQLL 259
W E A V++L +G +QPFYQ+L
Sbjct: 122 QWAETAGVDELPRGRNQPFYQVL 144
>gi|449534064|ref|XP_004173989.1| PREDICTED: uncharacterized protein LOC101228319, partial [Cucumis
sativus]
Length = 163
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 110/164 (67%), Gaps = 3/164 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIG--IDRPCFCHQFVQGLHLRVTF 58
MVQ LS+ +T G+ YGS WRR+FK +++ + R CF HQ ++ L
Sbjct: 1 MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++ + + AGWLFKGG ERSE+AN DIL FFFQLDLATRVQ ALN+E+Y
Sbjct: 61 RRSKRGSFKIRAGWLFKGGGQES-GGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 119
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLR 162
+IAQ+LR KLTEVE E+ +Q E+K+GL+SKSE QDK L+IIRLR
Sbjct: 120 EIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLR 163
>gi|224108918|ref|XP_002315015.1| predicted protein [Populus trichocarpa]
gi|222864055|gb|EEF01186.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 80/90 (88%)
Query: 131 VEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
VE E+ RQ EAKRG SSKSEAQDKA+SIIRLRADLQ AI++ENYA+AA+LRDQI +LEAE
Sbjct: 2 VEGEVIRQQEAKRGSSSKSEAQDKAISIIRLRADLQNAIENENYAVAAELRDQISELEAE 61
Query: 191 SLAASATALAFENARFAFRLGQKVNHKIFG 220
SLAASA AL +ENA++AFRLGQKV HK FG
Sbjct: 62 SLAASAKALVYENAQYAFRLGQKVKHKTFG 91
>gi|159483241|ref|XP_001699669.1| hypothetical protein CHLREDRAFT_141656 [Chlamydomonas reinhardtii]
gi|158281611|gb|EDP07365.1| predicted protein [Chlamydomonas reinhardtii]
Length = 293
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 5/189 (2%)
Query: 75 KGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTE-VEE 133
+GG+ ERS+ NE++++F FQLDL T++Q LN E Y+ AQ++R K ++E
Sbjct: 9 EGGATVRPVGERERSQLVNEEVVYFIFQLDLDTQLQRCLNYEAYEAAQEVRKKRQRSMKE 68
Query: 134 EISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLA 193
+R A + + A D A ++RLR ++Q+A+++E+Y AA RD + +LE E+
Sbjct: 69 RKARNTGAPVAVQRLAGA-DYAAELLRLRTEMQRAVEAEDYGSAAKYRDLLKELETEAKK 127
Query: 194 ASATALAFENARF---AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQG 250
A+A A ++ RLGQ+V HK GYR V+ G D CCES W+ A+V + +G
Sbjct: 128 AAALAAEWDTTSPNGPVLRLGQRVLHKQLGYRGVVVGWDMRCCESEEWIAAARVGECGRG 187
Query: 251 PSQPFYQLL 259
QPFY LL
Sbjct: 188 IGQPFYHLL 196
>gi|297720435|ref|NP_001172579.1| Os01g0764500 [Oryza sativa Japonica Group]
gi|255673711|dbj|BAH91309.1| Os01g0764500, partial [Oryza sativa Japonica Group]
Length = 73
Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/69 (73%), Positives = 58/69 (84%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
ESLA SA ALA++N +AFRLGQKV HK+ GYRAVICGMDPVCCES SWME A VE L +
Sbjct: 2 ESLAVSAKALAYQNVEYAFRLGQKVRHKVHGYRAVICGMDPVCCESKSWMETANVENLSK 61
Query: 250 GPSQPFYQL 258
GP+QPFYQ+
Sbjct: 62 GPNQPFYQV 70
>gi|302843425|ref|XP_002953254.1| hypothetical protein VOLCADRAFT_94016 [Volvox carteri f.
nagariensis]
gi|300261351|gb|EFJ45564.1| hypothetical protein VOLCADRAFT_94016 [Volvox carteri f.
nagariensis]
Length = 381
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 97/169 (57%), Gaps = 11/169 (6%)
Query: 102 QLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAK------RGLSSKSEAQDKA 155
QLDL T++Q LN E Y+ AQ++R K V+E + + E K S+K A D A
Sbjct: 15 QLDLDTQLQRCLNYEAYEAAQEVRKKRQRVDEAVQQMRERKARNTGMPAASTKLGAADFA 74
Query: 156 LSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFA-----FRL 210
+RLR+++Q+A+++ENYA AA RD + +LE + A+A A ++ + RL
Sbjct: 75 TEGLRLRSEMQRAVEAENYADAAKYRDLLRELETQVKKAAALAAEWDTTTSSSGGPKLRL 134
Query: 211 GQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
GQ+V H+ GYR V+ G D CCES W+ ++ E LQ G Q FY LL
Sbjct: 135 GQRVLHRQLGYRGVVVGWDSQCCESEDWIAQSKAESLQGGTRQVFYHLL 183
>gi|255638073|gb|ACU19351.1| unknown [Glycine max]
Length = 103
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 60 LLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDIL-FFFFQLDLATRVQCALNMEEY 118
L R RA A W+F+GG ++GLD SSE SESANEDIL FFFFQLDLATRVQ ALNME+Y
Sbjct: 31 LTRHSGFRAEAAWMFRGG-EQGLDVSSEHSESANEDILMFFFFQLDLATRVQYALNMEQY 89
Query: 119 DIAQQLRNKLTEV 131
DIA+QLRNKL EV
Sbjct: 90 DIAKQLRNKLAEV 102
>gi|384245506|gb|EIE19000.1| hypothetical protein COCSUDRAFT_54839 [Coccomyxa subellipsoidea
C-169]
Length = 253
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 94 EDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQD 153
++++ F FQ + T++Q ALN E+YD A +R + V+E I E + S+
Sbjct: 14 QELVLFIFQQEFDTQLQRALNYEDYDQANDIRQRRQTVDEAI----EKLQVFPSQD---- 65
Query: 154 KALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAAS---ATALAFENARFAFRL 210
++LR LQ+AI+ + Y AA LRD I L+ + A+ + ++ + R +L
Sbjct: 66 -----VQLRVQLQRAIEEQRYDDAAALRDTIGALQQKMRDAALQRSNSMQAQQPR-RLKL 119
Query: 211 GQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLLRRI-CWLLTNQ 269
GQ+V H GYRAV+ G D CCE W A LQ G QPFY LL + W L +
Sbjct: 120 GQRVEHATSGYRAVVYGWDDGCCEDDDWKAAADFNNLQFGDLQPFYHLLVDVRDWPLNSS 179
Query: 270 TWQGLIIP 277
T +P
Sbjct: 180 TPPVAYVP 187
>gi|223974865|gb|ACN31620.1| unknown [Zea mays]
Length = 152
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 11/111 (9%)
Query: 35 SRIGIDRPCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDA 84
+R + PC + QGLH + N R+ N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDA 82
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEI 135
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E+++
Sbjct: 83 RLERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIEQKL 133
>gi|4335759|gb|AAD17436.1| unknown protein [Arabidopsis thaliana]
gi|45773924|gb|AAS76766.1| At2g03400 [Arabidopsis thaliana]
Length = 131
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R ++ S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSVKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQ 110
L+QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ
Sbjct: 58 LKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQ 108
>gi|195613214|gb|ACG28437.1| hypothetical protein [Zea mays]
Length = 148
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 10/105 (9%)
Query: 35 SRIGIDRPCFCHQFVQGLH-LRVTFNLLRQRN--------LRANAGWLFKGGSDRGLDAS 85
+R + PC + QGLH L + + +N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDAR 82
Query: 86 SERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTE 130
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE
Sbjct: 83 LERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTE 127
>gi|413952335|gb|AFW84984.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 149
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 11/106 (10%)
Query: 35 SRIGIDRPCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDA 84
+R + PC + QGLH + N R+ N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDA 82
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTE 130
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE
Sbjct: 83 RLERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTE 128
>gi|224108922|ref|XP_002315016.1| predicted protein [Populus trichocarpa]
gi|222864056|gb|EEF01187.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 219 FGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLLRRI 262
GY+AV+CGMDP+CCESSSWME AQVEKL +G SQPFYQ+L +
Sbjct: 3 LGYQAVVCGMDPICCESSSWMETAQVEKLARGSSQPFYQVLVDV 46
>gi|388516453|gb|AFK46288.1| unknown [Medicago truncatula]
Length = 120
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Query: 218 IFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLLRRIC----WLLTNQTWQG 273
+FGYRA+I GMDPVC ESSSWME AQV+KL +G +QPFYQ+L +C L+ +
Sbjct: 1 MFGYRAIIVGMDPVCSESSSWMENAQVKKLSRGTAQPFYQVLVDVCAEPDLLVAYVAEEN 60
Query: 274 LIIP 277
L++P
Sbjct: 61 LLVP 64
>gi|22136040|gb|AAM91602.1| unknown protein [Arabidopsis thaliana]
gi|23197744|gb|AAN15399.1| unknown protein [Arabidopsis thaliana]
Length = 138
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 219 FGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
GYRAV+CGMDP+C ESSSWME A+VEKL +G +QPFYQ+L
Sbjct: 25 LGYRAVVCGMDPICSESSSWMEAAEVEKLPRGSNQPFYQVL 65
>gi|428168745|gb|EKX37686.1| hypothetical protein GUITHDRAFT_165416 [Guillardia theta CCMP2712]
Length = 479
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 108 RVQCALNMEEYDIAQQLRNKL-------------TEVEEEISRQL-EAKRGLSSKSEAQD 153
+++ A+N EE++ A L+ +L T ++EEI + +AK A +
Sbjct: 188 KMKNAVNAEEFEKADALKKELVGHEIKKMYHSLYTRIKEEIKKDYGKAKEIFDRMITADE 247
Query: 154 KALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAA---SATALAFENARFAFRL 210
K RL + +A +S + +DLR ++ +L S++ + ++F RF R+
Sbjct: 248 KK----RLEVQIARAAESNRWKSVSDLRARLVRLYVNSISRPILTTLGVSFRPPRF--RI 301
Query: 211 GQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
G V HK GYR V+ G D C + W++ ++++L +G +Q FY +L
Sbjct: 302 GDTVKHKGLGYRGVVIGWDDKCLATEYWIKHYKIDQLSKGRTQRFYHIL 350
>gi|384249751|gb|EIE23232.1| hypothetical protein COCSUDRAFT_63588 [Coccomyxa subellipsoidea
C-169]
Length = 714
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLLRRI 262
N +R+G+ + H+ +GYR VI G DP C W+ V+ L G QPFY +L I
Sbjct: 282 NGSVLYRVGEIMEHRRYGYRGVIFGWDPTCTAGDEWIAQMNVDALPGGRHQPFYHVLVDI 341
>gi|390604575|gb|EIN13966.1| YccV-like-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 527
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N + +G H + Y VI G DPVC ES WM +V++L +G QPFYQ L
Sbjct: 384 NTTIKYFVGAMFRHNKYEYDGVIVGWDPVCAESEQWMNQMKVDELNRGRRQPFYQAL 440
>gi|47221488|emb|CAG08150.1| unnamed protein product [Tetraodon nigroviridis]
Length = 427
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 86/221 (38%), Gaps = 26/221 (11%)
Query: 60 LLRQRN-LRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
LRQ+N LR+ +L +R + S +EDI F + Q EY
Sbjct: 146 FLRQQNILRSLKSFL-----ERPAEQQSALEGVTSEDIFDFVYIDAFGKGKQLTAKECEY 200
Query: 119 DIAQQLRNKL---TEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSEN-- 173
I Q+ E + R + + + E +K+ ++R DL I+ +N
Sbjct: 201 LIGHQVTADYYSAISTNELLLRMVGNLLNIGKRGEGNEKSYQLLRDSLDLYLTINPDNVQ 260
Query: 174 ---------YALAADLRDQICKLE----AESLAASATAL--AFENARFAFRLGQKVNHKI 218
+ L R LE + AA L + E+A + +G + HK
Sbjct: 261 YLLLQARLYFHLGIMARKVQHTLEHIQHKKHPAAPEVKLRSSPEHAEVQYSVGLIMKHKR 320
Query: 219 FGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
GY VI G DP C + W+ +V L GP QPFY +L
Sbjct: 321 SGYNCVIYGWDPKCTMNQEWITTMRVNLLPNGPQQPFYNVL 361
>gi|326930072|ref|XP_003211176.1| PREDICTED: f-box only protein 21-like [Meleagris gallopavo]
Length = 683
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G + HK +GY VI G DP C W+ V L GP QPFY +L
Sbjct: 426 FSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLPHGPHQPFYNVL 477
>gi|449265788|gb|EMC76926.1| F-box only protein 21 [Columba livia]
Length = 545
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G + HK +GY VI G DP C W+ V L GP QPFY +L
Sbjct: 424 FSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLTHGPHQPFYNVL 475
>gi|118098856|ref|XP_425297.2| PREDICTED: F-box only protein 21 [Gallus gallus]
Length = 610
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
++ F +G + HK +GY VI G DP C W+ V L GP QPFY +L
Sbjct: 469 KHKEVCFSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLPHGPHQPFYNVL 526
>gi|449477492|ref|XP_002196975.2| PREDICTED: F-box only protein 21 [Taeniopygia guttata]
Length = 556
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G + HK +GY VI G DP C W+ V L GP QPFY +L
Sbjct: 435 FSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLPHGPHQPFYNVL 486
>gi|330907499|ref|XP_003295833.1| hypothetical protein PTT_03336 [Pyrenophora teres f. teres 0-1]
gi|311332510|gb|EFQ96070.1| hypothetical protein PTT_03336 [Pyrenophora teres f. teres 0-1]
Length = 512
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +FR+GQ HK + Y AVI G D VC S W+ +V+ L G +Q FY +L
Sbjct: 402 KVSFRVGQLFRHKRYNYEAVITGWDVVCDMSEDWIRATRVDNLPDGRNQAFYHVL 456
>gi|440638435|gb|ELR08354.1| hypothetical protein GMDG_03149 [Geomyces destructans 20631-21]
Length = 602
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ + + +GQ HK +GY AVI G D C +S WME V+ L++G Q FY L
Sbjct: 492 HGKIQYEVGQVFQHKRYGYTAVITGWDVECTMNSRWMEQNHVDTLRKGQHQSFYHAL 548
>gi|307109179|gb|EFN57417.1| hypothetical protein CHLNCDRAFT_18065, partial [Chlorella
variabilis]
Length = 104
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 216 HKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
H + YR VI G DP+CC W ++ +V+ L G +QPFY++L
Sbjct: 4 HARYNYRGVIVGYDPICCAPDEWCQMMRVDSLPLGRNQPFYEVL 47
>gi|409051841|gb|EKM61317.1| hypothetical protein PHACADRAFT_82095, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 598
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G H+ + Y VI G DP C S W+E QV +L QG +QPFY ++
Sbjct: 458 FFVGLPFMHRRYDYLGVIYGWDPTCMASEEWIEQMQVNRLSQGRNQPFYHVI 509
>gi|94496207|ref|ZP_01302785.1| Hemimethylated DNA-binding region protein [Sphingomonas sp. SKA58]
gi|94424386|gb|EAT09409.1| Hemimethylated DNA-binding region protein [Sphingomonas sp. SKA58]
Length = 123
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
A TA +ARF+ +G V H++FG+R V+ +DPV S W E A E +
Sbjct: 8 FGAGMTAPPIVHARFS--IGDVVKHRMFGFRGVVFDIDPVFANSEEWYE-AIPEAARPDK 64
Query: 252 SQPFYQLL 259
QPFY LL
Sbjct: 65 HQPFYHLL 72
>gi|328778823|ref|XP_396942.4| PREDICTED: f-box only protein 21-like [Apis mellifera]
Length = 627
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HKI+GY VI G D C S+ WM V+ L++G QPFY++
Sbjct: 502 YAIGLIMKHKIYGYLCVITGWDVRCMASTEWMNEMNVDGLEEGADQPFYKIF 553
>gi|380030133|ref|XP_003698710.1| PREDICTED: F-box only protein 21-like [Apis florea]
Length = 627
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HKI+GY VI G D C S+ WM V+ L++G QPFY++
Sbjct: 502 YAIGLIMKHKIYGYLCVITGWDVRCMASTEWMNEMNVDGLEEGADQPFYKIF 553
>gi|358058793|dbj|GAA95756.1| hypothetical protein E5Q_02413 [Mixia osmundae IAM 14324]
Length = 623
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSS 237
A+ + Q +LEA +L ++T L A+ +G HK +GY VI D C
Sbjct: 441 AEAQAQTSRLEA-ALLETSTPLRRTAGSPAYTIGTVFRHKKYGYTGVIISWDLTCQAPDQ 499
Query: 238 WMEIAQVEKLQQGPSQPFYQLL 259
W Q+ +L +G QPFYQ+L
Sbjct: 500 WQAQMQIHRLPRGADQPFYQVL 521
>gi|451855551|gb|EMD68843.1| hypothetical protein COCSADRAFT_33702 [Cochliobolus sativus ND90Pr]
Length = 597
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+F++GQ HK +GY VI G D VC + W++ +V+ L G +Q FY +L
Sbjct: 489 SFKVGQLFQHKRYGYEGVITGWDVVCDANEDWIQNTRVDSLPNGRNQAFYHVL 541
>gi|452004997|gb|EMD97453.1| hypothetical protein COCHEDRAFT_1220865 [Cochliobolus
heterostrophus C5]
Length = 597
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+F++GQ HK +GY VI G D VC + W++ +V+ L G +Q FY +L
Sbjct: 489 SFKVGQLFQHKRYGYEGVITGWDVVCDANEDWIQNTRVDSLPNGRNQAFYHVL 541
>gi|350402750|ref|XP_003486590.1| PREDICTED: F-box only protein 21-like [Bombus impatiens]
Length = 627
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N ++A +G + HKI GY VI G D C ++ WM V L GP QPFY +
Sbjct: 499 NVKYA--IGLIMKHKIHGYMCVITGWDTYCTATTEWMNEMNVGGLVDGPGQPFYNIF 553
>gi|156394187|ref|XP_001636708.1| predicted protein [Nematostella vectensis]
gi|156223813|gb|EDO44645.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++ +++G + H+ + Y VI G DP C S +W++ V++L G SQPFY +L
Sbjct: 471 HSKVIYKVGMVMRHRRYHYGCVIWGWDPFCNMSDAWIQQMGVDRLPNGRSQPFYNVL 527
>gi|410923547|ref|XP_003975243.1| PREDICTED: F-box only protein 21-like [Takifugu rubripes]
Length = 612
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A E+ + +G + HK GY VI G DP C + W+ +V L GP+QPFY +L
Sbjct: 466 APEHLEVQYSVGLIMKHKRSGYNCVIYGWDPKCTMNQEWITTMRVNLLPNGPNQPFYNVL 525
>gi|432872855|ref|XP_004072158.1| PREDICTED: F-box only protein 21-like [Oryzias latipes]
Length = 648
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A E+ F +G + HK GY VI G DP C S W+ +V +L G +QPFY +L
Sbjct: 492 APEHLEVQFSVGLIMKHKRSGYNCVIYGWDPKCTMSQEWITTMRVHQLSSGANQPFYNVL 551
>gi|294010682|ref|YP_003544142.1| hypothetical protein SJA_C1-06960 [Sphingobium japonicum UT26S]
gi|390169323|ref|ZP_10221263.1| hypothetical protein SIDU_17573 [Sphingobium indicum B90A]
gi|292674012|dbj|BAI95530.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
gi|389588076|gb|EIM66131.1| hypothetical protein SIDU_17573 [Sphingobium indicum B90A]
Length = 123
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
TA +ARF+ LG V H++FG+R V+ +DPV + W + A E+++
Sbjct: 8 FGPDVTAPPIVHARFS--LGDVVQHRLFGFRGVVFDIDPVFANTEEWYQ-AIPEEVRPDK 64
Query: 252 SQPFYQLL 259
QPFY LL
Sbjct: 65 HQPFYHLL 72
>gi|307108514|gb|EFN56754.1| hypothetical protein CHLNCDRAFT_144212 [Chlorella variabilis]
Length = 351
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 181 RDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWME 240
R + ++EA AA A +F +GQ + H+ + YR VI G DP C S W++
Sbjct: 210 RSMLGEIEA---AAEAVHPREGQEAVSFVVGQVIRHRRYQYRGVIIGWDPECRASEEWVQ 266
Query: 241 IAQVEKLQQGPSQPFYQLL 259
V++L G QPFY +L
Sbjct: 267 QMGVDRLPGGRRQPFYHVL 285
>gi|340711833|ref|XP_003394473.1| PREDICTED: f-box only protein 21-like [Bombus terrestris]
Length = 627
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HKI GY VI G D C ++ WM V L GP QPFY +
Sbjct: 502 YAIGLIMKHKIHGYMCVITGWDTYCTATTEWMNEMNVGGLVDGPGQPFYNIF 553
>gi|378731949|gb|EHY58408.1| F-box protein 21 [Exophiala dermatitidis NIH/UT8656]
Length = 604
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+GQ H+ GY AVI G DP C W+ + QV++L G QPFY +L
Sbjct: 495 VGQIFRHRRRGYLAVIYGWDPYCRMQEQWIHMNQVDRLPNGRHQPFYNVL 544
>gi|393721414|ref|ZP_10341341.1| hypothetical protein SechA1_16783 [Sphingomonas echinoides ATCC
14820]
Length = 126
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 189 AESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQ 248
A ++ T +ARFA +G V H++F +R V+ +DP+ S W + A EKL+
Sbjct: 8 ALPFDSTITLPPIAHARFA--IGDVVRHRMFDFRGVVFDIDPIFANSDEWYD-AIPEKLR 64
Query: 249 QGPSQPFYQLL 259
QPFY LL
Sbjct: 65 PRKDQPFYHLL 75
>gi|196010988|ref|XP_002115358.1| hypothetical protein TRIADDRAFT_59194 [Trichoplax adhaerens]
gi|190582129|gb|EDV22203.1| hypothetical protein TRIADDRAFT_59194 [Trichoplax adhaerens]
Length = 531
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E + F++G + HK + ++ ++CG D VC + +W+ + +L QG +QPFY +L
Sbjct: 415 EYPQVKFKIGDILLHKRYNFQCIVCGWDSVCDKGEAWILQNGINQLSQGKNQPFYNVL 472
>gi|348533418|ref|XP_003454202.1| PREDICTED: F-box only protein 21-like [Oreochromis niloticus]
Length = 638
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A E+ + +G + HK GY VI G DP C S W+ +V +L G +QPFY +L
Sbjct: 488 APEHLEVQYSVGLIMKHKRSGYNCVIYGWDPKCTMSPEWISTMRVHQLSNGANQPFYNVL 547
>gi|87200491|ref|YP_497748.1| hemimethylated DNA-binding region protein [Novosphingobium
aromaticivorans DSM 12444]
gi|87136172|gb|ABD26914.1| Hemimethylated DNA-binding region protein [Novosphingobium
aromaticivorans DSM 12444]
Length = 126
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 197 TALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFY 256
+A +ARF+ +G V H++FG+R VI +DPV S W E + E ++ QPFY
Sbjct: 16 SAPPVSSARFS--IGDVVRHRMFGFRGVIFDIDPVFANSEEWYE-SIPEDMRPPRDQPFY 72
Query: 257 QLL 259
LL
Sbjct: 73 HLL 75
>gi|399069126|ref|ZP_10749297.1| hemimethylated DNA binding domain containing protein [Caulobacter
sp. AP07]
gi|398045278|gb|EJL38017.1| hemimethylated DNA binding domain containing protein [Caulobacter
sp. AP07]
Length = 109
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 203 NARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N+RFA F +GQ V H+IF +R V+ +DPV + W + E ++ QPFY LL
Sbjct: 2 NSRFAKFAIGQVVKHRIFPFRGVVFDVDPVFANTEEWWN-SIPEDIRPTKDQPFYHLL 58
>gi|189534325|ref|XP_696130.3| PREDICTED: f-box only protein 21 [Danio rerio]
Length = 637
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A E+ F G + HK GY VI G DP C S W+ +V +L +G QPFY +L
Sbjct: 488 APEHRDVQFSTGLIMKHKRSGYNCVIYGWDPKCTMSQEWINTMRVHQLSKGADQPFYNVL 547
>gi|383647913|ref|ZP_09958319.1| hemimethylated DNA binding protein [Sphingomonas elodea ATCC 31461]
Length = 126
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 191 SLAASATAL-AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
++A+S T + + +ARFA +G V H++ +R VI +DPV + W + V+ +Q
Sbjct: 9 TIASSGTPMPSIASARFA--IGDVVRHRLLDFRGVIFDVDPVFANTDEWYDSIPVD-MQP 65
Query: 250 GPSQPFYQLL 259
QPFY LL
Sbjct: 66 AKDQPFYHLL 75
>gi|295689973|ref|YP_003593666.1| hemimethylated DNA binding protein [Caulobacter segnis ATCC 21756]
gi|295431876|gb|ADG11048.1| hemimethylated DNA binding protein [Caulobacter segnis ATCC 21756]
Length = 109
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 203 NARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N+R A F +GQ V H+IF +R V+ +DPV + W E + E+++ QPFY LL
Sbjct: 2 NSRLAKFAIGQVVRHRIFPFRGVVFDVDPVFANTEEWWE-SIPEEIRPTKDQPFYHLL 58
>gi|299756203|ref|XP_001829165.2| hypothetical protein CC1G_01845 [Coprinopsis cinerea okayama7#130]
gi|298411570|gb|EAU92800.2| hypothetical protein CC1G_01845 [Coprinopsis cinerea okayama7#130]
Length = 626
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%)
Query: 158 IIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHK 217
+I R L K D A I + E++ A A ++R + +G +NH
Sbjct: 425 LILYRNLLPKLNDEHQAAFNEHCVKAIQQEESKIAALDAPKRRASSSRPKYFVGMAMNHL 484
Query: 218 IFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ YR VI G P C W+E V+ L G SQPFY +
Sbjct: 485 KYNYRGVIFGWTPKCEAPEEWIENMDVDSLAGGRSQPFYHVF 526
>gi|198412658|ref|XP_002129491.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 565
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A ENAR F +G H +GY V+ G D C S W + + +L G +QP+Y +L
Sbjct: 438 ADENARVMFSVGTVTRHLKYGYVCVVRGWDNYCDMSVRWQRLMGIPQLNDGATQPYYNVL 497
>gi|189200465|ref|XP_001936569.1| F-box domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983668|gb|EDU49156.1| F-box domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 590
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 188 EAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKL 247
+ +++ A + + F++GQ HK + Y VI G D C +S W++ +V+ L
Sbjct: 470 QVDAMRKPAITRSTRTNKVTFKVGQLFTHKRYRYEGVITGWDVACDQSEDWIQNMRVDNL 529
Query: 248 QQGPSQPFYQLL 259
G +Q FY +L
Sbjct: 530 PDGRNQAFYHVL 541
>gi|326470477|gb|EGD94486.1| F-box protein [Trichophyton tonsurans CBS 112818]
gi|326478661|gb|EGE02671.1| F-box domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 595
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N +++GQ HK + Y +I G DP C WME V++L G Q FY +L
Sbjct: 482 NGNVKYKVGQLFRHKRYEYIGLITGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVL 538
>gi|327306473|ref|XP_003237928.1| F-box protein [Trichophyton rubrum CBS 118892]
gi|326460926|gb|EGD86379.1| F-box protein [Trichophyton rubrum CBS 118892]
Length = 595
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N +++GQ HK + Y +I G DP C WME V++L G Q FY +L
Sbjct: 482 NGNVKYKVGQLFRHKRYEYIGLITGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVL 538
>gi|302498555|ref|XP_003011275.1| hypothetical protein ARB_02557 [Arthroderma benhamiae CBS 112371]
gi|302657356|ref|XP_003020402.1| hypothetical protein TRV_05520 [Trichophyton verrucosum HKI 0517]
gi|291174824|gb|EFE30635.1| hypothetical protein ARB_02557 [Arthroderma benhamiae CBS 112371]
gi|291184232|gb|EFE39784.1| hypothetical protein TRV_05520 [Trichophyton verrucosum HKI 0517]
Length = 595
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N +++GQ HK + Y +I G DP C WME V++L G Q FY +L
Sbjct: 482 NGNVKYKVGQLFRHKRYEYIGLITGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVL 538
>gi|315047616|ref|XP_003173183.1| F-box domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311343569|gb|EFR02772.1| F-box domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 595
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N +++GQ HK + Y +I G DP C WME V++L G Q FY +L
Sbjct: 482 NGNVKYKVGQLFRHKRYEYIGLITGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVL 538
>gi|431914239|gb|ELK15497.1| F-box only protein 21 [Pteropus alecto]
Length = 536
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 412 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 463
>gi|347527964|ref|YP_004834711.1| putative DNA-binding protein [Sphingobium sp. SYK-6]
gi|345136645|dbj|BAK66254.1| putative DNA-binding protein [Sphingobium sp. SYK-6]
Length = 136
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+G V H++FG+R V+ +DPV S W E V + QPFY L
Sbjct: 35 FRIGDTVRHRMFGFRGVVFDIDPVFANSEEWYEAIPV-AARPPRDQPFYHLF 85
>gi|452978188|gb|EME77952.1| hypothetical protein MYCFIDRAFT_33434 [Pseudocercospora fijiensis
CIRAD86]
Length = 597
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 186 KLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVE 245
K + A S + EN A+++G HK +GY VI G + C W+E +V+
Sbjct: 470 KADQNKKAPSPRDKSTENV--AYKIGHHFRHKRYGYEGVIIGWNMRCTAEQRWIEQMRVD 527
Query: 246 KLQQGPSQPFY 256
L +G QPFY
Sbjct: 528 DLPRGREQPFY 538
>gi|26339162|dbj|BAC33252.1| unnamed protein product [Mus musculus]
gi|26339396|dbj|BAC33369.1| unnamed protein product [Mus musculus]
Length = 620
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|335057501|ref|NP_001101808.2| F-box only protein 21 [Rattus norvegicus]
Length = 620
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|354466988|ref|XP_003495953.1| PREDICTED: F-box only protein 21 [Cricetulus griseus]
gi|344237032|gb|EGV93135.1| F-box only protein 21 [Cricetulus griseus]
Length = 627
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|149063492|gb|EDM13815.1| F-box only protein 21 (predicted) [Rattus norvegicus]
Length = 632
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 508 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 559
>gi|148687855|gb|EDL19802.1| F-box only protein 21, isoform CRA_b [Mus musculus]
Length = 620
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|426247750|ref|XP_004017639.1| PREDICTED: F-box only protein 21 [Ovis aries]
Length = 549
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 425 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 476
>gi|21704134|ref|NP_663539.1| F-box only protein 21 [Mus musculus]
gi|51316047|sp|Q8VDH1.1|FBX21_MOUSE RecName: Full=F-box only protein 21
gi|18256900|gb|AAH21871.1| F-box protein 21 [Mus musculus]
gi|26340462|dbj|BAC33894.1| unnamed protein product [Mus musculus]
Length = 627
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|148687854|gb|EDL19801.1| F-box only protein 21, isoform CRA_a [Mus musculus]
Length = 637
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 513 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 564
>gi|395833958|ref|XP_003789984.1| PREDICTED: F-box only protein 21 isoform 1 [Otolemur garnettii]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|26006223|dbj|BAC41454.1| mKIAA0875 protein [Mus musculus]
Length = 625
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 501 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 552
>gi|301770735|ref|XP_002920785.1| PREDICTED: f-box only protein 21-like [Ailuropoda melanoleuca]
Length = 565
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 441 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 492
>gi|395833960|ref|XP_003789985.1| PREDICTED: F-box only protein 21 isoform 2 [Otolemur garnettii]
Length = 628
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|345790904|ref|XP_543416.3| PREDICTED: F-box only protein 21 isoform 2 [Canis lupus familiaris]
Length = 620
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|126324696|ref|XP_001374929.1| PREDICTED: f-box only protein 21 [Monodelphis domestica]
Length = 629
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 505 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 556
>gi|347300233|ref|NP_001231426.1| F-box only protein 21 [Sus scrofa]
Length = 627
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|381200581|ref|ZP_09907718.1| hypothetical protein SyanX_08818 [Sphingobium yanoikuyae XLDN2-5]
gi|427410116|ref|ZP_18900318.1| hemimethylated DNA binding domain-containing protein [Sphingobium
yanoikuyae ATCC 51230]
gi|425712249|gb|EKU75264.1| hemimethylated DNA binding domain-containing protein [Sphingobium
yanoikuyae ATCC 51230]
Length = 123
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
K+ +++ TA +ARF+ +G + H+ FG+R V+ +DPV S W E +
Sbjct: 1 MKVTIQNIGTGITAPPVVHARFS--IGDVLKHRSFGFRGVVFDIDPVFANSEEWYE-SIP 57
Query: 245 EKLQQGPSQPFYQLL 259
E + QPFY LL
Sbjct: 58 EHARPDKQQPFYHLL 72
>gi|351694761|gb|EHA97679.1| Nitric oxide synthase, brain [Heterocephalus glaber]
Length = 1802
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 1677 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 1728
>gi|397524992|ref|XP_003832463.1| PREDICTED: F-box only protein 21 [Pan paniscus]
Length = 469
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 344 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 395
>gi|338727760|ref|XP_001489475.3| PREDICTED: LOW QUALITY PROTEIN: f-box only protein 21, partial
[Equus caballus]
Length = 531
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 407 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 458
>gi|432116790|gb|ELK37415.1| F-box only protein 21 [Myotis davidii]
Length = 578
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 454 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 505
>gi|417403538|gb|JAA48569.1| Putative f-box only protein 21 [Desmodus rotundus]
Length = 637
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 513 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 564
>gi|327351397|gb|EGE80254.1| F-box domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 600
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 172 ENYALAADLRDQICKLEA-ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDP 230
EN A L + + L A + + + E+ +++GQ H+ +GY AVI G D
Sbjct: 455 ENLPEYAPLLESVRVLRAGDEIPKQVRSRTPEHKHVKYKVGQVFRHRRYGYVAVITGWDA 514
Query: 231 VCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
C WM+ +++L+ G Q FY +L
Sbjct: 515 ECGAGEQWMQRMGIDRLRAGRHQSFYHVL 543
>gi|417403459|gb|JAA48533.1| Putative f-box only protein 21 [Desmodus rotundus]
Length = 628
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 504 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 555
>gi|393723748|ref|ZP_10343675.1| hemimethylated DNA binding protein [Sphingomonas sp. PAMC 26605]
Length = 126
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
+ + +A +ARFA +G V H++F +R V+ +DPV S W + A
Sbjct: 4 TPITSPPFSAEIPLPPISHARFA--IGDVVRHRMFDFRGVVFDVDPVFANSDEWYD-AIP 60
Query: 245 EKLQQGPSQPFYQLL 259
E ++ QPFY LL
Sbjct: 61 ENIRPRKDQPFYHLL 75
>gi|355786571|gb|EHH66754.1| hypothetical protein EGM_03804, partial [Macaca fascicularis]
Length = 549
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 424 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 475
>gi|345790906|ref|XP_003433428.1| PREDICTED: F-box only protein 21 isoform 1 [Canis lupus familiaris]
Length = 627
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|193786667|dbj|BAG51990.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 246 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 297
>gi|60688267|gb|AAH91496.1| FBXO21 protein, partial [Homo sapiens]
Length = 620
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 495 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 546
>gi|71051436|gb|AAH34045.1| FBXO21 protein [Homo sapiens]
Length = 537
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 412 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 463
>gi|355688311|gb|AER98463.1| F-box protein 21 [Mustela putorius furo]
Length = 562
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 442 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 493
>gi|344295245|ref|XP_003419324.1| PREDICTED: F-box only protein 21 isoform 2 [Loxodonta africana]
Length = 620
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|281343739|gb|EFB19323.1| hypothetical protein PANDA_009569 [Ailuropoda melanoleuca]
Length = 548
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 424 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 475
>gi|355564721|gb|EHH21221.1| hypothetical protein EGK_04235 [Macaca mulatta]
Length = 567
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 442 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 493
>gi|344295243|ref|XP_003419323.1| PREDICTED: F-box only protein 21 isoform 1 [Loxodonta africana]
Length = 627
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|27503437|gb|AAH42333.1| FBXO21 protein [Homo sapiens]
gi|119618509|gb|EAW98103.1| F-box protein 21, isoform CRA_b [Homo sapiens]
Length = 477
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 352 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 403
>gi|16306500|ref|NP_055817.1| F-box only protein 21 isoform 2 [Homo sapiens]
gi|114647178|ref|XP_001156074.1| PREDICTED: F-box only protein 21 isoform 8 [Pan troglodytes]
gi|297693122|ref|XP_002823873.1| PREDICTED: F-box only protein 21 isoform 2 [Pongo abelii]
gi|426374290|ref|XP_004054009.1| PREDICTED: F-box only protein 21 isoform 1 [Gorilla gorilla
gorilla]
gi|6164745|gb|AAF04522.1|AF174601_1 F-box protein Fbx21 [Homo sapiens]
gi|4240239|dbj|BAA74898.1| KIAA0875 protein [Homo sapiens]
gi|119618511|gb|EAW98105.1| F-box protein 21, isoform CRA_c [Homo sapiens]
gi|119618512|gb|EAW98106.1| F-box protein 21, isoform CRA_c [Homo sapiens]
gi|168269512|dbj|BAG09883.1| F-box only protein 21 [synthetic construct]
gi|193786072|dbj|BAG50962.1| unnamed protein product [Homo sapiens]
gi|410227126|gb|JAA10782.1| F-box protein 21 [Pan troglodytes]
gi|410249122|gb|JAA12528.1| F-box protein 21 [Pan troglodytes]
gi|410298838|gb|JAA28019.1| F-box protein 21 [Pan troglodytes]
gi|410334515|gb|JAA36204.1| F-box protein 21 [Pan troglodytes]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|444723214|gb|ELW63875.1| F-box only protein 21, partial [Tupaia chinensis]
Length = 542
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 417 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 468
>gi|402887803|ref|XP_003907270.1| PREDICTED: F-box only protein 21 [Papio anubis]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|291407086|ref|XP_002719851.1| PREDICTED: F-box only protein 21 isoform 1 [Oryctolagus cuniculus]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|380810786|gb|AFE77268.1| F-box only protein 21 isoform 2 [Macaca mulatta]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|60390171|sp|Q5R5S1.1|FBX21_PONAB RecName: Full=F-box only protein 21
gi|55732388|emb|CAH92895.1| hypothetical protein [Pongo abelii]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|403281572|ref|XP_003932256.1| PREDICTED: F-box only protein 21 [Saimiri boliviensis boliviensis]
Length = 537
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 412 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 463
>gi|109098894|ref|XP_001083109.1| PREDICTED: f-box only protein 21 isoform 5 [Macaca mulatta]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|291407088|ref|XP_002719852.1| PREDICTED: F-box only protein 21 isoform 2 [Oryctolagus cuniculus]
Length = 628
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|410976704|ref|XP_003994753.1| PREDICTED: F-box only protein 21 [Felis catus]
Length = 476
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 352 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 403
>gi|390468258|ref|XP_002753105.2| PREDICTED: LOW QUALITY PROTEIN: F-box only protein 21 [Callithrix
jacchus]
Length = 647
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 522 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 573
>gi|332250698|ref|XP_003274489.1| PREDICTED: F-box only protein 21 isoform 1 [Nomascus leucogenys]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 547
>gi|16306502|ref|NP_296373.1| F-box only protein 21 isoform 1 [Homo sapiens]
gi|114647180|ref|XP_001155956.1| PREDICTED: F-box only protein 21 isoform 6 [Pan troglodytes]
gi|395744917|ref|XP_003778181.1| PREDICTED: F-box only protein 21 [Pongo abelii]
gi|426374292|ref|XP_004054010.1| PREDICTED: F-box only protein 21 isoform 2 [Gorilla gorilla
gorilla]
gi|218512038|sp|O94952.2|FBX21_HUMAN RecName: Full=F-box only protein 21
gi|119618508|gb|EAW98102.1| F-box protein 21, isoform CRA_a [Homo sapiens]
gi|119618510|gb|EAW98104.1| F-box protein 21, isoform CRA_a [Homo sapiens]
gi|410227128|gb|JAA10783.1| F-box protein 21 [Pan troglodytes]
gi|410249124|gb|JAA12529.1| F-box protein 21 [Pan troglodytes]
gi|410298840|gb|JAA28020.1| F-box protein 21 [Pan troglodytes]
gi|410334517|gb|JAA36205.1| F-box protein 21 [Pan troglodytes]
Length = 628
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|358369013|dbj|GAA85628.1| F-box domain protein [Aspergillus kawachii IFO 4308]
Length = 509
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+R+GQ H+ + YRA+I G D C WM +++LQ G Q FY +L
Sbjct: 401 YRVGQVFRHRRYDYRAIITGWDTECGAGEQWMRRMGIDRLQGGRHQSFYHVL 452
>gi|380810784|gb|AFE77267.1| F-box only protein 21 isoform 1 [Macaca mulatta]
Length = 628
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 554
>gi|395514055|ref|XP_003761236.1| PREDICTED: F-box only protein 21 [Sarcophilus harrisii]
Length = 634
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 510 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVL 561
>gi|326387957|ref|ZP_08209562.1| hemimethylated DNA-binding region protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207548|gb|EGD58360.1| hemimethylated DNA-binding region protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 126
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 197 TALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFY 256
TA ARFA +G V HK+F +R VI +DPV + W E + E ++ QPFY
Sbjct: 16 TAPDISVARFA--IGDVVRHKLFDFRGVIFDIDPVFANTEEWYE-SIPEDIRPPRDQPFY 72
Query: 257 QLL 259
LL
Sbjct: 73 HLL 75
>gi|296804864|ref|XP_002843280.1| F-box domain-containing protein [Arthroderma otae CBS 113480]
gi|238845882|gb|EEQ35544.1| F-box domain-containing protein [Arthroderma otae CBS 113480]
Length = 580
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N +++GQ HK + Y ++ G DP C WME V++L G Q FY +L
Sbjct: 467 NGNVKYKVGQLFRHKRYEYIGLVTGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVL 523
>gi|85716366|ref|ZP_01047339.1| hemimethylated DNA-binding region protein [Nitrobacter sp. Nb-311A]
gi|85696882|gb|EAQ34767.1| hemimethylated DNA-binding region protein [Nitrobacter sp. Nb-311A]
Length = 110
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 204 ARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
AR A F++GQ V+H+IF +R VI +DPV + W ++ E ++ QPFY LL
Sbjct: 4 ARIAKFQIGQIVSHRIFSFRGVIFDIDPVFNNTEEWW-LSIPENIRPHKDQPFYHLL 59
>gi|255945239|ref|XP_002563387.1| Pc20g08640 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588122|emb|CAP86193.1| Pc20g08640 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 585
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
NA +R+GQ H+ + Y A+I G D C WM +++L+ G Q FY +L
Sbjct: 468 NANIQYRVGQVFRHRRYHYEAIITGWDSECGAGEQWMRRMGIDRLEAGRHQSFYHVL 524
>gi|83593699|ref|YP_427451.1| hemimethylated DNA-binding region [Rhodospirillum rubrum ATCC
11170]
gi|386350444|ref|YP_006048692.1| hemimethylated DNA-binding region [Rhodospirillum rubrum F11]
gi|83576613|gb|ABC23164.1| Hemimethylated DNA-binding region [Rhodospirillum rubrum ATCC
11170]
gi|346718880|gb|AEO48895.1| hemimethylated DNA-binding region [Rhodospirillum rubrum F11]
Length = 109
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+R+GQ V H+++ +R VI +DPV + W + A E ++ QPFY LL
Sbjct: 8 YRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYD-AIPEDIRPARDQPFYHLL 58
>gi|334346085|ref|YP_004554637.1| hemimethylated DNA binding protein [Sphingobium chlorophenolicum
L-1]
gi|334102707|gb|AEG50131.1| hemimethylated DNA binding protein [Sphingobium chlorophenolicum
L-1]
Length = 123
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 195 SATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQP 254
TA +ARF+ +G V H+ FG+R VI +DPV + W + A E+++ QP
Sbjct: 11 DVTAPPIVHARFS--IGDVVQHRRFGFRGVIFDIDPVFANTEEWYQ-AIPEEVRPHKEQP 67
Query: 255 FYQLL 259
FY LL
Sbjct: 68 FYHLL 72
>gi|332187077|ref|ZP_08388817.1| hemimethylated DNA binding domain protein [Sphingomonas sp. S17]
gi|332012777|gb|EGI54842.1| hemimethylated DNA binding domain protein [Sphingomonas sp. S17]
Length = 112
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLLRR- 261
+ARFA +G V H++F R VI +DPV S W + A E+++ QPFY LL
Sbjct: 8 SARFA--IGDVVRHRMFDIRGVIFDVDPVFANSDEWYD-AIPEQIRPAKDQPFYHLLAEN 64
Query: 262 -----ICW-----LLTNQTWQGLIIPIFLSCFTG 285
+ + LL + + + + P FTG
Sbjct: 65 AESSYVAYVSQQNLLPDDSDEPVDHPALAGLFTG 98
>gi|320040175|gb|EFW22108.1| hypothetical protein CPSG_00007 [Coccidioides posadasii str.
Silveira]
Length = 586
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQL 258
++ +R+GQ H+ + Y AVI G DP C WM+ +++L+ G Q FY +
Sbjct: 472 DHTNIKYRVGQVFRHRRYNYVAVIIGWDPECGAREEWMQQMGIDRLRAGRHQSFYHV 528
>gi|303321432|ref|XP_003070710.1| hemimethylated DNA binding domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110407|gb|EER28565.1| hemimethylated DNA binding domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 589
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQL 258
++ +R+GQ H+ + Y AVI G DP C WM+ +++L+ G Q FY +
Sbjct: 475 DHTNIKYRVGQVFRHRRYNYVAVIIGWDPECGAREEWMQQMGIDRLRAGRHQSFYHV 531
>gi|85710506|ref|ZP_01041570.1| hypothetical protein NAP1_08852 [Erythrobacter sp. NAP1]
gi|85687684|gb|EAQ27689.1| hypothetical protein NAP1_08852 [Erythrobacter sp. NAP1]
Length = 126
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 191 SLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQG 250
S A T A ++R F +G+ V H++F +R V+ +DPV S W E + E+++
Sbjct: 8 SSQAGRTINAPRSSRSRFGIGELVRHRLFDFRGVVFDIDPVFANSEEWYE-SIPEEIRPP 66
Query: 251 PSQPFYQLL 259
QPFY LL
Sbjct: 67 RDQPFYHLL 75
>gi|16125860|ref|NP_420424.1| hypothetical protein CC_1613 [Caulobacter crescentus CB15]
gi|221234622|ref|YP_002517058.1| hemimethylated DNA-binding protein yccV [Caulobacter crescentus
NA1000]
gi|13423012|gb|AAK23592.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220963794|gb|ACL95150.1| hemimethylated DNA-binding protein yccV [Caulobacter crescentus
NA1000]
Length = 109
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 203 NARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N+R A F +GQ V H+IF +R V+ +DPV + W + + E ++ QPFY LL
Sbjct: 2 NSRLAKFAIGQVVRHRIFPFRGVVFDVDPVFANTEEWWQ-SIPEDIRPTKDQPFYHLL 58
>gi|119195523|ref|XP_001248365.1| hypothetical protein CIMG_02136 [Coccidioides immitis RS]
gi|392862418|gb|EAS36940.2| hemimethylated DNA binding domain-containing protein [Coccidioides
immitis RS]
Length = 589
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQL 258
++ +R+GQ H+ + Y AVI G DP C WM+ +++L+ G Q FY +
Sbjct: 475 DHTNIKYRVGQVFRHRRYNYVAVIIGWDPECGAREEWMQQMGIDRLRAGRHQSFYHV 531
>gi|398384777|ref|ZP_10542805.1| hemimethylated DNA binding domain-containing protein [Sphingobium
sp. AP49]
gi|397722057|gb|EJK82602.1| hemimethylated DNA binding domain-containing protein [Sphingobium
sp. AP49]
Length = 123
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
K+ +++ A + +ARF+ +G + H+ FG+R V+ +DPV S W E +
Sbjct: 1 MKVTIQNIGTGIAAPSIVHARFS--IGDVLKHRSFGFRGVVFDIDPVFANSDEWYE-SIP 57
Query: 245 EKLQQGPSQPFYQLL 259
E + QPFY LL
Sbjct: 58 EHARPDKEQPFYHLL 72
>gi|407917462|gb|EKG10770.1| F-box domain cyclin-like protein [Macrophomina phaseolina MS6]
Length = 603
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+N R+ +GQ HK + Y VI G DP C WM ++ L G +Q FY +L
Sbjct: 493 KNVRYG--VGQCFKHKRYHYYGVIVGWDPYCNAGDDWMHAMNIDGLPNGRNQAFYNVL 548
>gi|338974449|ref|ZP_08629809.1| hypothetical protein CSIRO_2904 [Bradyrhizobiaceae bacterium SG-6C]
gi|414166800|ref|ZP_11423032.1| hemimethylated DNA binding domain-containing protein [Afipia
clevelandensis ATCC 49720]
gi|338232322|gb|EGP07452.1| hypothetical protein CSIRO_2904 [Bradyrhizobiaceae bacterium SG-6C]
gi|410892644|gb|EKS40436.1| hemimethylated DNA binding domain-containing protein [Afipia
clevelandensis ATCC 49720]
Length = 110
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DPV + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRIFSFRGVIYDIDPVFNNTEEWW-LSIPEEMRPHKDQPFYHLL 59
>gi|326433202|gb|EGD78772.1| hemimethylated DNA binding domain-containing protein [Salpingoeca
sp. ATCC 50818]
Length = 216
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 13/122 (10%)
Query: 165 LQKAIDSENYALAADLRDQI-------CKLEAESLAASATALAFENARFAFRLGQKVNHK 217
LQ+ + + A+ R Q +++ + A + + FR+GQ + HK
Sbjct: 53 LQQPTEQHTSSTASTSRQQTEPPTTHNTRIDRQEYYAGSKMPRRDRTGVKFRVGQVIRHK 112
Query: 218 IFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL----RRICWLLTNQTWQG 273
+GYR +I G D W E V K + S PFY +L R T WQG
Sbjct: 113 RYGYRGIIIGWDTFAKAPDGWFEKMGVNKEHR--SDPFYSVLVDTRDRGPRPQTTYVWQG 170
Query: 274 LI 275
I
Sbjct: 171 NI 172
>gi|163760196|ref|ZP_02167279.1| hypothetical protein HPDFL43_08039 [Hoeflea phototrophica DFL-43]
gi|162282595|gb|EDQ32883.1| hypothetical protein HPDFL43_08039 [Hoeflea phototrophica DFL-43]
Length = 109
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H+IF +R VI +DPV + W A E ++ QPFY LL
Sbjct: 8 FTIGQVVKHRIFPFRGVIFDVDPVYANTEEWWN-AIPENVRPRKDQPFYHLL 58
>gi|92117577|ref|YP_577306.1| hemimethylated DNA-binding region [Nitrobacter hamburgensis X14]
gi|91800471|gb|ABE62846.1| Hemimethylated DNA-binding region [Nitrobacter hamburgensis X14]
Length = 110
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 204 ARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
AR A F++GQ V H+IF +R VI +DPV + W ++ E ++ QPFY LL
Sbjct: 4 ARIARFQIGQIVRHRIFPFRGVIFDIDPVFNNTEEWW-LSIPENVRPHKDQPFYHLL 59
>gi|425784147|gb|EKV21941.1| hypothetical protein PDIP_01660 [Penicillium digitatum Pd1]
Length = 583
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLLRR 261
NA +++GQ H+ + Y A+I G D C WM +++L+ G Q FY +L+
Sbjct: 467 NANIQYKVGQIFRHRRYHYEAIITGWDSECGAGEQWMRRMGIDRLEAGRHQSFYHVLKH 525
>gi|425778589|gb|EKV16707.1| hypothetical protein PDIG_18960 [Penicillium digitatum PHI26]
Length = 522
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLLRR 261
NA +++GQ H+ + Y A+I G D C WM +++L+ G Q FY +L+
Sbjct: 406 NANIQYKVGQIFRHRRYHYEAIITGWDSECGAGEQWMRRMGIDRLEAGRHQSFYHVLKH 464
>gi|357975002|ref|ZP_09138973.1| hemimethylated DNA binding protein [Sphingomonas sp. KC8]
Length = 126
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 194 ASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQ 253
A A A +ARFA +G V H++ +R VI +DPV S W + A E ++ Q
Sbjct: 13 AQLVAPAVTHARFA--IGDVVRHRLLEFRGVIFDVDPVFANSEEWYD-AIPEGVRPARDQ 69
Query: 254 PFYQLL 259
PFY LL
Sbjct: 70 PFYHLL 75
>gi|327276144|ref|XP_003222830.1| PREDICTED: f-box only protein 21-like [Anolis carolinensis]
Length = 620
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HK +GY VI G DP C W+ V L G QPFY +L
Sbjct: 500 YSVGMIMKHKRYGYNCVIYGWDPSCMMGHEWIRNMNVHSLPLGAHQPFYNVL 551
>gi|67904144|ref|XP_682328.1| hypothetical protein AN9059.2 [Aspergillus nidulans FGSC A4]
gi|40742702|gb|EAA61892.1| hypothetical protein AN9059.2 [Aspergillus nidulans FGSC A4]
gi|259485530|tpe|CBF82629.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 477
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+FE+ + +GQ H+ + Y A+I G D C WM ++ LQ G Q FY ++
Sbjct: 361 SFEHKSVKYHIGQVFRHRRYNYTAIITGWDAECGAGEQWMRRMGIDHLQSGRHQSFYHVI 420
>gi|402819205|ref|ZP_10868774.1| hypothetical protein IMCC14465_00080 [alpha proteobacterium
IMCC14465]
gi|402511909|gb|EJW22169.1| hypothetical protein IMCC14465_00080 [alpha proteobacterium
IMCC14465]
Length = 113
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R VI +DP+ + W E + E ++ +QPFY LL
Sbjct: 12 FTIGQVVKHRLFPFRGVIFDVDPIFDNTDEWWE-SIPEDIRPHKNQPFYHLL 62
>gi|395492336|ref|ZP_10423915.1| hemimethylated DNA binding protein [Sphingomonas sp. PAMC 26617]
Length = 126
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
+++ + +ARFA +G V H++F +R V+ +DP+ S W + A
Sbjct: 4 TPIQSPPFDTTIALPPISHARFA--IGAVVRHRMFDFRGVVFDIDPIFANSDEWYD-AIP 60
Query: 245 EKLQQGPSQPFYQLL 259
E ++ QPFY LL
Sbjct: 61 ENIRPRKDQPFYHLL 75
>gi|396484014|ref|XP_003841844.1| similar to F-box domain containing protein [Leptosphaeria maculans
JN3]
gi|312218419|emb|CBX98365.1| similar to F-box domain containing protein [Leptosphaeria maculans
JN3]
Length = 606
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ AF++GQ H+ +GY VI G D C W+ V+ L G Q FY +L
Sbjct: 496 KVAFKVGQLFQHRRYGYEGVITGWDVACGAGEEWIMNQDVDGLPHGRDQAFYHVL 550
>gi|404252719|ref|ZP_10956687.1| hemimethylated DNA binding protein [Sphingomonas sp. PAMC 26621]
Length = 126
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
+++ + +ARFA +G V H++F +R V+ +DP+ S W + A
Sbjct: 4 TPIQSPPFDTTIALPPISHARFA--IGAVVRHRMFDFRGVVFDIDPIFANSDEWYD-AIP 60
Query: 245 EKLQQGPSQPFYQLL 259
E ++ QPFY LL
Sbjct: 61 ENIRPRKDQPFYHLL 75
>gi|390451299|ref|ZP_10236876.1| hemimethylated DNA binding protein [Nitratireductor aquibiodomus
RA22]
gi|389661206|gb|EIM72832.1| hemimethylated DNA binding protein [Nitratireductor aquibiodomus
RA22]
Length = 110
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+GQ V H++F +R VI +DP + +W + A E+++ QPFY LL
Sbjct: 9 FRIGQVVRHRVFDFRGVIFDVDPEFNNTEAWYQ-AIPEEVRPRKDQPFYHLL 59
>gi|83643114|ref|YP_431549.1| hypothetical protein HCH_00208 [Hahella chejuensis KCTC 2396]
gi|83631157|gb|ABC27124.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396]
Length = 103
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A+ F +GQ V H +FGYR V+ G+DP+ + +W E V K + QP+Y +L
Sbjct: 2 AQAHFFVGQLVEHNLFGYRGVVIGVDPMFNHTDAWYE--SVAKSRPPKDQPWYHVL 55
>gi|103486585|ref|YP_616146.1| hemimethylated DNA-binding region [Sphingopyxis alaskensis RB2256]
gi|98976662|gb|ABF52813.1| Hemimethylated DNA-binding region [Sphingopyxis alaskensis RB2256]
Length = 124
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 189 AESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQ 248
E+ T L AR F G V H++F +R V+ +DPV S W E A E+++
Sbjct: 7 PETPITPVTPLV---ARARFAPGDIVRHRMFDFRGVVFDIDPVFANSDEWYE-AIPEEIR 62
Query: 249 QGPSQPFYQLL 259
QP+Y LL
Sbjct: 63 PAKEQPYYHLL 73
>gi|167646172|ref|YP_001683835.1| hemimethylated DNA-binding protein [Caulobacter sp. K31]
gi|167348602|gb|ABZ71337.1| hemimethylated DNA binding protein [Caulobacter sp. K31]
Length = 109
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 203 NARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
N+R A F +GQ V H+IF +R V+ +DPV + W + E ++ QPFY LL
Sbjct: 2 NSRTAKFAIGQVVKHRIFPFRGVVFDVDPVFANTEEWWN-SIPEDIRPTKDQPFYHLL 58
>gi|187607970|ref|NP_001120516.1| F-box protein 21 [Xenopus (Silurana) tropicalis]
gi|170284790|gb|AAI61417.1| LOC100145649 protein [Xenopus (Silurana) tropicalis]
gi|170284792|gb|AAI61423.1| LOC100145649 protein [Xenopus (Silurana) tropicalis]
Length = 617
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 153 DKALSIIRLRADLQKAIDSENYALAADLRDQICKLEA--ESLAASATALAFENARFAFRL 210
+K L I++ ++Q S++ A+A ++ + +E E A + EN + ++ +
Sbjct: 438 EKVLDILQ---NIQALDPSQHGAVAYLVQHTLVHIEKRKEENALDCKLRSNEN-QVSYSI 493
Query: 211 GQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
G V HK + Y VI G DP C W++ + L QG Q FY +L
Sbjct: 494 GLVVRHKRYDYSGVIFGWDPFCMMPPDWIDNMDIHSLSQGADQAFYNVL 542
>gi|121717430|ref|XP_001276076.1| F-box domain protein [Aspergillus clavatus NRRL 1]
gi|119404266|gb|EAW14650.1| F-box domain protein [Aspergillus clavatus NRRL 1]
Length = 604
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
++ R +R+GQ H+ + Y A+I G D C WM +++LQ G Q FY +L
Sbjct: 490 KHLRVKYRIGQVFCHRRYNYTAIITGWDTECDAGEQWMRRMGIDRLQAGRQQSFYHVL 547
>gi|260821103|ref|XP_002605873.1| hypothetical protein BRAFLDRAFT_90800 [Branchiostoma floridae]
gi|229291209|gb|EEN61883.1| hypothetical protein BRAFLDRAFT_90800 [Branchiostoma floridae]
Length = 521
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 201 FENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F + +G + H+ + Y VI G DP C S WM V L GP+QPF+ +L
Sbjct: 396 FNTEGVIYSVGMIMRHRRYSYNCVIYGWDPQCEMSEEWMIQMGVHSLSMGPNQPFFNVL 454
>gi|383856996|ref|XP_003703992.1| PREDICTED: F-box only protein 21-like [Megachile rotundata]
Length = 619
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + HKI Y VI G D C S+ WM V++L G QPFY +
Sbjct: 499 YAIGLIMEHKILRYLCVITGWDTRCMASTEWMNEMNVDELTHGADQPFYNVF 550
>gi|449304277|gb|EMD00285.1| hypothetical protein BAUCODRAFT_63524 [Baudoinia compniacensis UAMH
10762]
Length = 603
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ ++G H+ +GY +I G D C W+E +V++L +G QPFY ++
Sbjct: 497 SHKIGTYFQHRRYGYEGMIVGWDTKCAAEPRWIEQMRVDELPRGREQPFYNVV 549
>gi|453081032|gb|EMF09082.1| F-box only protein [Mycosphaerella populorum SO2202]
Length = 589
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 209 RLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R+G HK + Y VI G D C W+E +V+ L +G QPFY ++
Sbjct: 485 RIGTHFRHKRYDYEGVIVGWDRRCSAEQRWIEQMRVDDLPRGREQPFYNIV 535
>gi|39935735|ref|NP_948011.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris
CGA009]
gi|192291322|ref|YP_001991927.1| hemimethylated DNA binding protein [Rhodopseudomonas palustris
TIE-1]
gi|39649588|emb|CAE28110.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192285071|gb|ACF01452.1| hemimethylated DNA binding protein [Rhodopseudomonas palustris
TIE-1]
Length = 110
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R V+ +DP + W +A E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRIFSFRGVVFDIDPEFANTEEWW-LAIPEEVRPSKDQPFYHLL 59
>gi|430762309|ref|YP_007218166.1| hemimethylated DNA binding protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011933|gb|AGA34685.1| hemimethylated DNA binding protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 106
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V+H+ FGYR VI G+DPV S W E V + + QP+Y +L
Sbjct: 7 FSVGELVHHRKFGYRGVIVGVDPVFAGSDEWYE--AVARSRPPRDQPWYHVL 56
>gi|154247792|ref|YP_001418750.1| hemimethylated DNA binding protein [Xanthobacter autotrophicus Py2]
gi|154161877|gb|ABS69093.1| hemimethylated DNA binding protein [Xanthobacter autotrophicus Py2]
Length = 107
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+G+ V HK F +R V+ +DPV + W ++ E+++ QPFY LL
Sbjct: 6 FRIGEVVRHKHFPFRGVVFDVDPVFDNTEEWW-LSIPEEIRPHKDQPFYHLL 56
>gi|115524801|ref|YP_781712.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisA53]
gi|115518748|gb|ABJ06732.1| hemimethylated DNA binding protein [Rhodopseudomonas palustris
BisA53]
Length = 110
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W +A E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRIFSFRGVIFDIDPEFNNTEEWW-LAIPEEVRPPKDQPFYHLL 59
>gi|239614386|gb|EEQ91373.1| F-box domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 597
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 172 ENYALAADLRDQICKLEA-ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDP 230
EN A L + + L A + + + E+ +++GQ H+ + Y AVI G D
Sbjct: 452 ENLPEYAPLLESVRVLRAGDEIPKQVRSRTPEHKHVKYKIGQVFRHRRYDYVAVITGWDA 511
Query: 231 VCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
C WM+ +++L+ G Q FY +L
Sbjct: 512 ECGAGEQWMQRMGIDRLRAGRHQSFYHVL 540
>gi|294055617|ref|YP_003549275.1| hemimethylated DNA binding protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614950|gb|ADE55105.1| hemimethylated DNA binding protein [Coraliomargarita akajimensis
DSM 45221]
Length = 116
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A + +G V HK++GYR V+ DP C ++W K Q QP+Y +L
Sbjct: 14 APVLYEIGSVVTHKLYGYRGVVVAYDPQCMAGNTWY---MANKTQPPKDQPWYHVL 66
>gi|225554853|gb|EEH03147.1| F-box domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 578
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY +L
Sbjct: 519 EHKNIKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVL 576
>gi|220926920|ref|YP_002502222.1| hemimethylated DNA binding protein [Methylobacterium nodulans ORS
2060]
gi|219951527|gb|ACL61919.1| hemimethylated DNA binding protein [Methylobacterium nodulans ORS
2060]
Length = 157
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 177 AADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESS 236
ADL L A S +A A+F +G V H+I+ +R +I +DPV +
Sbjct: 27 PADL-PATSPLPAMSPHPDPGPVAIRRAKF--NIGAVVRHRIYPFRGIIFDVDPVFSNTE 83
Query: 237 SWMEIAQVEKLQQGPSQPFYQLL 259
W +A E+++ QPFY LL
Sbjct: 84 EWW-LAIPEEVRPSKDQPFYHLL 105
>gi|148556791|ref|YP_001264373.1| hemimethylated DNA binding protein [Sphingomonas wittichii RW1]
gi|148501981|gb|ABQ70235.1| hemimethylated DNA binding protein [Sphingomonas wittichii RW1]
Length = 130
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 191 SLAASATAL-------AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQ 243
S+ A+A AL + +ARF+ +G V H++F +R V+ +DPV S W + A
Sbjct: 7 SIPAAAGALHQGIISPSISHARFS--IGDVVRHRMFEFRGVVFDVDPVFANSEEWYQ-AI 63
Query: 244 VEKLQQGPSQPFYQLL 259
E ++ QPFY L
Sbjct: 64 PEDMRPAKEQPFYHLF 79
>gi|261195791|ref|XP_002624299.1| F-box domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239587432|gb|EEQ70075.1| F-box domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 597
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 172 ENYALAADLRDQICKLEA-ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDP 230
EN A L + + L A + + + E+ +++GQ H+ + Y AVI G D
Sbjct: 452 ENLPEYAPLLESVRVLRAGDEIPKQVRSRTPEHKHVKYKIGQVFRHRRYDYVAVITGWDA 511
Query: 231 VCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
C WM+ +++L+ G Q FY +L
Sbjct: 512 ECGAGEQWMQRMGIDRLRGGRHQSFYHVL 540
>gi|316934172|ref|YP_004109154.1| hemimethylated DNA-binding protein [Rhodopseudomonas palustris
DX-1]
gi|315601886|gb|ADU44421.1| hemimethylated DNA binding protein [Rhodopseudomonas palustris
DX-1]
Length = 110
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R V+ +DP + W +A E ++ QPFY LL
Sbjct: 9 FQIGQIVRHRIFSFRGVVFDIDPEFANTEEWW-LAIPEDVRPSKDQPFYHLL 59
>gi|405976334|gb|EKC40846.1| F-box only protein 21 [Crassostrea gigas]
Length = 224
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 173 NYALAADLRDQICKLEAESL-------AASATALAFENARFAFRLGQKVNHKIFGYRAVI 225
+YA DL + LE AS + +R+GQ + HKI+GYR VI
Sbjct: 74 SYAGQDDLNGESPALEVMKFKDPEGYFGASTEPRSPRPPEVRYRVGQVIRHKIWGYRGVI 133
Query: 226 CGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
DP W+E + Q +QP Y +L
Sbjct: 134 VAWDPQARAPEGWVEQNHRKDKPQWRTQPNYAIL 167
>gi|342321683|gb|EGU13615.1| F-box domain protein [Rhodotorula glutinis ATCC 204091]
Length = 595
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 176 LAADLRDQI---CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVC 232
L+A++R +I C+ E AA+ N + +G H++F Y AVI G D C
Sbjct: 447 LSAEVRPRISVLCEAIREEDAANKEQ-KLVNGEIKWPIGHVFRHRLFRYVAVIRGWDYKC 505
Query: 233 CESSSWMEIAQVEKLQQGPSQPFYQLL 259
S W+ +V+ L G +QPFY ++
Sbjct: 506 EASEQWIRQMRVDTLPHGRNQPFYHVV 532
>gi|225685099|gb|EEH23383.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 597
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY +L
Sbjct: 483 EHKNVKYKIGQVFRHRRYDYIAVITGWDAECGAGEQWMQQMGIDRLRAGKHQSFYHVL 540
>gi|149185681|ref|ZP_01863997.1| Hemimethylated DNA-binding region protein [Erythrobacter sp. SD-21]
gi|148830901|gb|EDL49336.1| Hemimethylated DNA-binding region protein [Erythrobacter sp. SD-21]
Length = 126
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V HK F +R VI +DPV S W + + E ++ +QPFY LL
Sbjct: 25 FAIGDVVRHKAFDFRGVIFDVDPVFANSEDWYQ-SIPEDIRPDRNQPFYHLL 75
>gi|240274230|gb|EER37747.1| F-box protein [Ajellomyces capsulatus H143]
Length = 595
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY +L
Sbjct: 481 EHKNIKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVL 538
>gi|325091698|gb|EGC45008.1| F-box domain-containing protein [Ajellomyces capsulatus H88]
Length = 595
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY +L
Sbjct: 481 EHKNIKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVL 538
>gi|220936087|ref|YP_002514986.1| hemimethylated DNA-binding region [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997397|gb|ACL73999.1| hemimethylated DNA-binding region [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 103
Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ ++H++FGYR V+ +DPV + W AQV + Q +P+Y +L
Sbjct: 6 FSIGQIIHHRLFGYRGVVVDVDPVFQGTEEWY--AQVAQSQPPRDEPWYHVL 55
>gi|384261281|ref|YP_005416467.1| Hemimethylated DNA-binding region [Rhodospirillum photometricum DSM
122]
gi|378402381|emb|CCG07497.1| Hemimethylated DNA-binding region [Rhodospirillum photometricum DSM
122]
Length = 138
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 191 SLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQG 250
S A AT + E F +GQ V HK+ +R VI +DPV + W A E ++
Sbjct: 20 SGARGATGGSMEIRVAKFHIGQVVRHKVHPFRGVIVDVDPVFDNTEEWYA-AIPEAIRPS 78
Query: 251 PSQPFYQLL 259
QPFY LL
Sbjct: 79 RDQPFYHLL 87
>gi|407973207|ref|ZP_11154119.1| hemimethylated DNA binding protein [Nitratireductor indicus C115]
gi|407431048|gb|EKF43720.1| hemimethylated DNA binding protein [Nitratireductor indicus C115]
Length = 110
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+GQ V H++F +R V+ +DP + W E E ++ QPFY LL
Sbjct: 9 FRIGQVVKHRLFSFRGVVFDVDPEFNNTEEWYEAIPAE-VRPRKDQPFYHLL 59
>gi|384251853|gb|EIE25330.1| hypothetical protein COCSUDRAFT_61552 [Coccomyxa subellipsoidea
C-169]
Length = 238
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLLR- 260
+ +R AF LG HK FGY+ V+ G D C +W + P+QPFY +L
Sbjct: 74 DRSRVAFSLGTVFIHKKFGYKGVVYGWDQECERDPAWAAAVHAD-----PTQPFYHVLPD 128
Query: 261 -----------RICWLLTNQTWQGLIIP 277
RI + + L++P
Sbjct: 129 EDDCQRIFGAVRISKYVAQDNMEPLLVP 156
>gi|226294414|gb|EEH49834.1| F-box domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 572
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY +L
Sbjct: 483 EHKNVKYKIGQVFRHRRYDYIAVITGWDAECGAGEQWMQQMGIDRLRAGKHQSFYHVL 540
>gi|295657185|ref|XP_002789164.1| F-box domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284508|gb|EEH40074.1| F-box domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 572
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY +L
Sbjct: 483 EHKNVKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQQMGIDRLRAGKHQSFYHVL 540
>gi|170744359|ref|YP_001773014.1| hemimethylated DNA binding protein [Methylobacterium sp. 4-46]
gi|168198633|gb|ACA20580.1| hemimethylated DNA binding protein [Methylobacterium sp. 4-46]
Length = 115
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R F +G V H+I+ +R +I +DPV + W +A E+++ QPFY LL
Sbjct: 10 RAKFNIGAVVRHRIYPFRGIIFDVDPVFNNTEEWW-LAIPEEVRPAKDQPFYHLL 63
>gi|402849696|ref|ZP_10897922.1| putative Hemimethylated DNA-binding region [Rhodovulum sp. PH10]
gi|402499979|gb|EJW11665.1| putative Hemimethylated DNA-binding region [Rhodovulum sp. PH10]
Length = 114
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +GQ V H+I+ +R VI +DPV + W E A E+ + QPFY L
Sbjct: 12 YTIGQVVRHRIYPFRGVIFDVDPVFANTDEWYE-AIPEESRPNKDQPFYHLF 62
>gi|212545096|ref|XP_002152702.1| F-box only protein, putative [Talaromyces marneffei ATCC 18224]
gi|210065671|gb|EEA19765.1| F-box only protein, putative [Talaromyces marneffei ATCC 18224]
Length = 578
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 189 AESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQ 248
+ +A + E+ +R+GQ H+ + Y+A+I G D C W+ +++LQ
Sbjct: 451 VDEMAKTVHPRGPEHQNVKYRVGQVFIHRRYDYQAIITGWDAECDAGEEWVRRMGIDQLQ 510
Query: 249 QGPSQPFYQLL 259
G Q FY L
Sbjct: 511 AGRKQSFYHAL 521
>gi|452838226|gb|EME40167.1| hypothetical protein DOTSEDRAFT_74857 [Dothistroma septosporum
NZE10]
Length = 596
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 193 AASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPS 252
A + + A +++G HK + Y I G D C W+E +V+ L G S
Sbjct: 476 AKAPSPRGDNTAAVKYKIGNHFRHKRYEYEGFIVGWDMKCEAEDRWIEQMRVDHLPDGRS 535
Query: 253 QPFYQLL 259
QPFY ++
Sbjct: 536 QPFYNVV 542
>gi|154281251|ref|XP_001541438.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411617|gb|EDN07005.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 242
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY +L
Sbjct: 183 EHKNIKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVL 240
>gi|119474627|ref|XP_001259189.1| F-box domain protein [Neosartorya fischeri NRRL 181]
gi|119407342|gb|EAW17292.1| F-box domain protein [Neosartorya fischeri NRRL 181]
Length = 581
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+R+GQ H+ + Y AVI G D C S WM +++L+ G Q FY L
Sbjct: 473 YRIGQVFRHRRYSYLAVITGWDTECDASEQWMRRMGIDRLEAGRHQSFYHAL 524
>gi|118589822|ref|ZP_01547226.1| hypothetical protein SIAM614_14195 [Stappia aggregata IAM 12614]
gi|118437319|gb|EAV43956.1| hypothetical protein SIAM614_14195 [Stappia aggregata IAM 12614]
Length = 107
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+GQ V H+I+ +R VI +DP + W A E ++ QPFY LL
Sbjct: 6 FRIGQVVRHRIYPFRGVIFDVDPTFSNTEEWWN-AIPEDVRPLRDQPFYHLL 56
>gi|414173619|ref|ZP_11428246.1| hemimethylated DNA binding domain-containing protein [Afipia
broomeae ATCC 49717]
gi|410890253|gb|EKS38052.1| hemimethylated DNA binding domain-containing protein [Afipia
broomeae ATCC 49717]
Length = 110
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRIFSFRGVIYDIDPEFNNTEEWW-LSIPEEMRPHKDQPFYHLL 59
>gi|75675700|ref|YP_318121.1| hemimethylated DNA-binding region [Nitrobacter winogradskyi Nb-255]
gi|74420570|gb|ABA04769.1| hemimethylated DNA-binding region [Nitrobacter winogradskyi Nb-255]
Length = 114
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+I+ +R VI +DPV + W ++ E ++ QPFY +L
Sbjct: 13 FQIGQIVRHRIYSFRGVIFDIDPVFNNTEEWW-LSIPENVRPHKDQPFYHML 63
>gi|83945235|ref|ZP_00957584.1| hypothetical protein OA2633_00670 [Oceanicaulis sp. HTCC2633]
gi|83851405|gb|EAP89261.1| hypothetical protein OA2633_00670 [Oceanicaulis sp. HTCC2633]
Length = 109
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V H++F +R VI +DPV + W ++ E L+ QPFY LL
Sbjct: 6 FTIGDVVRHRLFPFRGVIFDVDPVFANTEDWW-LSIPESLRPDKDQPFYHLL 56
>gi|114798382|ref|YP_760504.1| hemimethylated DNA binding domain-containing protein [Hyphomonas
neptunium ATCC 15444]
gi|114738556|gb|ABI76681.1| hemimethylated DNA binding domain protein [Hyphomonas neptunium
ATCC 15444]
Length = 150
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V HK+F +R VI +DP + W + + E+++ QPFY L
Sbjct: 49 FQIGQVVRHKLFPFRGVIFDVDPQFANTDEWYD-SIPEEVRPRKDQPFYHLF 99
>gi|383771770|ref|YP_005450835.1| hypothetical protein S23_35230 [Bradyrhizobium sp. S23321]
gi|381359893|dbj|BAL76723.1| hypothetical protein S23_35230 [Bradyrhizobium sp. S23321]
Length = 110
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|90424114|ref|YP_532484.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisB18]
gi|90106128|gb|ABD88165.1| Hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisB18]
Length = 110
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|365896313|ref|ZP_09434394.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365422946|emb|CCE06936.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 110
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVKHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|329850836|ref|ZP_08265681.1| hemimethylated DNA binding domain protein [Asticcacaulis
biprosthecum C19]
gi|328841151|gb|EGF90722.1| hemimethylated DNA binding domain protein [Asticcacaulis
biprosthecum C19]
Length = 109
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R F +GQ V H +F +R VI +DP + W E A E ++ +QPFY LL
Sbjct: 5 RAKFDIGQIVKHNLFEFRGVIFDVDPEFANTDEWWE-AIPESVRPSKNQPFYHLL 58
>gi|158422850|ref|YP_001524142.1| hemimethylated DNA-binding protein [Azorhizobium caulinodans ORS
571]
gi|158329739|dbj|BAF87224.1| hemimethylated DNA-binding region protein [Azorhizobium caulinodans
ORS 571]
Length = 148
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+G V H+ F +R V+ +DPV + W ++ E+++ QPFY LL
Sbjct: 47 FRIGDVVRHRHFPFRGVVFDVDPVFDNTEEWY-LSIPEEIRPRKDQPFYHLL 97
>gi|421604437|ref|ZP_16046617.1| hypothetical protein BCCGELA001_37727 [Bradyrhizobium sp.
CCGE-LA001]
gi|404263453|gb|EJZ28953.1| hypothetical protein BCCGELA001_37727 [Bradyrhizobium sp.
CCGE-LA001]
Length = 110
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|374575599|ref|ZP_09648695.1| hemimethylated DNA binding domain protein [Bradyrhizobium sp.
WSM471]
gi|386395199|ref|ZP_10079977.1| hemimethylated DNA binding domain [Bradyrhizobium sp. WSM1253]
gi|374423920|gb|EHR03453.1| hemimethylated DNA binding domain protein [Bradyrhizobium sp.
WSM471]
gi|385735825|gb|EIG56021.1| hemimethylated DNA binding domain [Bradyrhizobium sp. WSM1253]
Length = 110
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|307947125|ref|ZP_07662460.1| hemimethylated DNA binding protein [Roseibium sp. TrichSKD4]
gi|307770789|gb|EFO30015.1| hemimethylated DNA binding protein [Roseibium sp. TrichSKD4]
Length = 119
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H+I+ +R VI +DP + W + A E ++ QPFY LL
Sbjct: 18 FNIGQVVRHRIYPFRGVIFDVDPTFSNTEEWWD-AIPEDVRPKRDQPFYHLL 68
>gi|304391754|ref|ZP_07373696.1| hemimethylated DNA binding protein [Ahrensia sp. R2A130]
gi|303295983|gb|EFL90341.1| hemimethylated DNA binding protein [Ahrensia sp. R2A130]
Length = 107
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+++ +R V+ +DP + W + A E ++ QPFY L
Sbjct: 6 FQIGQVVKHRVYPFRGVVFDVDPTFDNTDEWYD-AIPEDIRPAKDQPFYHLF 56
>gi|384218778|ref|YP_005609944.1| hypothetical protein BJ6T_50950 [Bradyrhizobium japonicum USDA 6]
gi|354957677|dbj|BAL10356.1| hypothetical protein BJ6T_50950 [Bradyrhizobium japonicum USDA 6]
Length = 110
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|254469367|ref|ZP_05082772.1| hemimethylated DNA binding protein [Pseudovibrio sp. JE062]
gi|211961202|gb|EEA96397.1| hemimethylated DNA binding protein [Pseudovibrio sp. JE062]
Length = 110
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+GQ V H+++ +R ++ +DP + W E + E+ + QPFY LL
Sbjct: 9 FRIGQVVRHRLYPFRGIVFDVDPTFDNTEEWWE-SIPEEARPSKDQPFYHLL 59
>gi|398819213|ref|ZP_10577773.1| hemimethylated DNA binding domain containing protein
[Bradyrhizobium sp. YR681]
gi|398230086|gb|EJN16148.1| hemimethylated DNA binding domain containing protein
[Bradyrhizobium sp. YR681]
Length = 110
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|393244417|gb|EJD51929.1| hypothetical protein AURDEDRAFT_158772 [Auricularia delicata
TFB-10046 SS5]
Length = 622
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 194 ASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQ 253
A L R + +GQ V H+ + Y VI D C + SW+ + V++L G Q
Sbjct: 449 ARDVKLQVRTERILYAVGQIVFHRRYHYWGVIRSWDHSCTGTESWINLMDVDRLPGGRQQ 508
Query: 254 PFYQLL 259
PFY++
Sbjct: 509 PFYRVF 514
>gi|154300268|ref|XP_001550550.1| hypothetical protein BC1G_11323 [Botryotinia fuckeliana B05.10]
Length = 551
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R F++GQ H+ +GY I G D C S+W+ Q++ G +Q FY +L
Sbjct: 497 RVKFKIGQVFRHQRYGYTGAIIGWDVGCHMGSNWIAQHQIDSYPGGRNQSFYHVL 551
>gi|328543856|ref|YP_004303965.1| Hemimethylated DNA binding protein [Polymorphum gilvum SL003B-26A1]
gi|326413600|gb|ADZ70663.1| Hemimethylated DNA binding protein [Polymorphum gilvum SL003B-26A1]
Length = 113
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+I+ +R VI +DP + W A E ++ QPFY LL
Sbjct: 12 FKIGQVVRHRIYPFRGVIFDVDPTFNNTEEWWN-AIPEDVRPSRDQPFYHLL 62
>gi|27379699|ref|NP_771228.1| hypothetical protein blr4588 [Bradyrhizobium japonicum USDA 110]
gi|27352851|dbj|BAC49853.1| blr4588 [Bradyrhizobium japonicum USDA 110]
Length = 110
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|347841269|emb|CCD55841.1| similar to F-box domain-containing protein [Botryotinia fuckeliana]
Length = 605
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R F++GQ H+ +GY I G D C S+W+ Q++ G +Q FY +L
Sbjct: 497 RVKFKIGQVFRHQRYGYTGAIIGWDVGCHMGSNWIAQHQIDSYPGGRNQSFYHVL 551
>gi|407779772|ref|ZP_11127024.1| hemimethylated DNA binding protein [Nitratireductor pacificus
pht-3B]
gi|407298391|gb|EKF17531.1| hemimethylated DNA binding protein [Nitratireductor pacificus
pht-3B]
Length = 107
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R VI +DP + +W + A E+++ QPFY LL
Sbjct: 6 FSIGQVVRHRLFDFRGVIFDVDPEFNNTEAWYQ-AIPEEMRPRKDQPFYHLL 56
>gi|350631773|gb|EHA20144.1| hypothetical protein ASPNIDRAFT_53116 [Aspergillus niger ATCC 1015]
Length = 524
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+GQ H+ + YRA+I G D C WM +++LQ G Q FY +L
Sbjct: 475 VGQVFRHRRYDYRAIITGWDTECGAGEQWMRRMGIDRLQGGRHQSFYHVL 524
>gi|292492714|ref|YP_003528153.1| hemimethylated DNA binding protein [Nitrosococcus halophilus Nc4]
gi|291581309|gb|ADE15766.1| hemimethylated DNA binding protein [Nitrosococcus halophilus Nc4]
Length = 105
Score = 44.7 bits (104), Expect = 0.058, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +R F +GQ V HK+F YR V+ DPV S W E Q+ + Q +P+Y +L
Sbjct: 2 QQSRAKFGIGQLVRHKLFHYRGVVVDADPVFQGSPEWYE--QMAQSQPPKDRPWYHVL 57
>gi|398389955|ref|XP_003848438.1| hypothetical protein MYCGRDRAFT_77046 [Zymoseptoria tritici IPO323]
gi|339468313|gb|EGP83414.1| hypothetical protein MYCGRDRAFT_77046 [Zymoseptoria tritici IPO323]
Length = 621
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++G + HK FGY + G D C W+E +V++L +G Q FY ++
Sbjct: 511 YKIGTWMRHKRFGYEGFVVGWDATCGAEERWVEQMRVDELSRGREQGFYNVV 562
>gi|359790955|ref|ZP_09293828.1| hypothetical protein MAXJ12_16011 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253069|gb|EHK56249.1| hypothetical protein MAXJ12_16011 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 136
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R VI +DP + W E E ++ QPFY LL
Sbjct: 35 FAIGQVVRHRLFPFRGVIYDVDPQFANTEEWYEAIPAE-VRPRKDQPFYHLL 85
>gi|307103624|gb|EFN51882.1| hypothetical protein CHLNCDRAFT_59044 [Chlorella variabilis]
Length = 285
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG 144
++ERS N++++ F FQL++ +++Q AL E +D+AQ++R + +V+ + R+L+ +G
Sbjct: 70 TAERSMLINKEVVLFLFQLEMDSQLQRALTYERFDMAQEVRGRREQVDAAL-RELQQLKG 128
>gi|242814620|ref|XP_002486404.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218714743|gb|EED14166.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 578
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +R+GQ H+ + Y+AVI G D C + WM +++L+ G Q FY L
Sbjct: 464 EHQNVKYRVGQVFIHRRYEYQAVITGWDAECDANEEWMRRMGIDQLRAGRKQSFYHAL 521
>gi|85373540|ref|YP_457602.1| hypothetical protein ELI_03565 [Erythrobacter litoralis HTCC2594]
gi|84786623|gb|ABC62805.1| hypothetical protein ELI_03565 [Erythrobacter litoralis HTCC2594]
Length = 126
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
NARF +G V H++F +R VI +DPV S W E + ++++ QP+Y L
Sbjct: 22 NARFG--IGDVVRHRMFDFRGVIFDIDPVFANSEEWYE-SIPQEIRPRRDQPYYHLF 75
>gi|197104876|ref|YP_002130253.1| hypothetical protein PHZ_c1410 [Phenylobacterium zucineum HLK1]
gi|196478296|gb|ACG77824.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 188
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 178 ADLRDQICKLEAESLAASATAL------------AFENARFA-FRLGQKVNHKIFGYRAV 224
D ++ EA+ L ATAL F R A F +GQ V H+++ +R V
Sbjct: 44 GDCSKRLTASEAQPLNGRATALRSPSSQQMGSRFEFMGTRLAKFTIGQVVRHRVYPFRGV 103
Query: 225 ICGMDPVCCESSS-WMEIAQVEKLQQGPSQPFYQLL 259
I +DP + W+ I E ++ QPFY LL
Sbjct: 104 IFDVDPTFNNTEEYWLSIP--EHIRPHKDQPFYHLL 137
>gi|393765280|ref|ZP_10353865.1| hemimethylated DNA binding protein [Methylobacterium sp. GXF4]
gi|392729279|gb|EIZ86559.1| hemimethylated DNA binding protein [Methylobacterium sp. GXF4]
Length = 112
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 197 TALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFY 256
T + A+FA +G V H+I+ +R ++ +DPV + W +A E+++ QPFY
Sbjct: 2 TDVTLRTAKFA--IGAVVRHRIYPFRGIVFDVDPVFDNTEEWW-LAIPEEVRPRKDQPFY 58
Query: 257 QLL 259
LL
Sbjct: 59 HLL 61
>gi|198437036|ref|XP_002125379.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 245
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWM 239
A S+T + +R+GQ + HK++GYR VI G D C W+
Sbjct: 122 FATSSTPRVPRPKKVKYRVGQVIKHKLYGYRGVIVGWDDHCKAPDLWI 169
>gi|424864390|ref|ZP_18288294.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86B]
gi|400759819|gb|EJP74000.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86B]
Length = 112
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL-----RRI 262
F +G+ V H+ +R I +DP S W ++ E ++ QPFY LL ++I
Sbjct: 9 FSIGEIVKHRFLAFRGAIIDIDPEFNNSEEWY-LSIPENIRPRKEQPFYHLLAEDLEKKI 67
Query: 263 CW--------LLTNQTWQGLIIP---IFLSCFTGR 286
C+ LL +++++ + P F S F G+
Sbjct: 68 CYVAYVSEQNLLIDESYEECVHPEIKKFFSKFDGK 102
>gi|86749962|ref|YP_486458.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris HaA2]
gi|91977098|ref|YP_569757.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisB5]
gi|86572990|gb|ABD07547.1| Hemimethylated DNA-binding region [Rhodopseudomonas palustris HaA2]
gi|91683554|gb|ABE39856.1| Hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisB5]
Length = 110
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+IF +R V+ +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRIFSFRGVVFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|367476791|ref|ZP_09476166.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365270987|emb|CCD88634.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 110
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H++F +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRVFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|148255533|ref|YP_001240118.1| hypothetical protein BBta_4151 [Bradyrhizobium sp. BTAi1]
gi|146407706|gb|ABQ36212.1| hypothetical protein BBta_4151 [Bradyrhizobium sp. BTAi1]
Length = 110
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H++F +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRVFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|402218117|gb|EJT98195.1| hypothetical protein DACRYDRAFT_118922 [Dacryopinax sp. DJM-731
SS1]
Length = 700
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 177 AADLRDQICKL----EAESLAASATA----LAFENARFAFRLGQKVNHKIFGYRAVICGM 228
A +RDQ+ + E L A A LA + F +G + H F Y VI
Sbjct: 471 AVQVRDQLIHMYELQETNELQAKRDADSMPLAVDGTNVEFHVGTLMRHAKFAYIGVIADW 530
Query: 229 DPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ C + WM V+ L +G +QPFY +
Sbjct: 531 NTKCHQPEQWMREMGVDMLSRGRNQPFYTVF 561
>gi|146340725|ref|YP_001205773.1| hypothetical protein BRADO3778 [Bradyrhizobium sp. ORS 278]
gi|365878410|ref|ZP_09417887.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365891889|ref|ZP_09430250.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|146193531|emb|CAL77548.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
gi|365293726|emb|CCD90418.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365332098|emb|CCE02781.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 110
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H++F +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRVFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|239833938|ref|ZP_04682266.1| hemimethylated DNA binding domain-containing protein [Ochrobactrum
intermedium LMG 3301]
gi|444309985|ref|ZP_21145613.1| hemimethylated DNA binding protein [Ochrobactrum intermedium M86]
gi|239822001|gb|EEQ93570.1| hemimethylated DNA binding domain-containing protein [Ochrobactrum
intermedium LMG 3301]
gi|443486632|gb|ELT49406.1| hemimethylated DNA binding protein [Ochrobactrum intermedium M86]
Length = 112
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H++F +R VI +DP + W E + E+ + QPFY LL
Sbjct: 11 FQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYE-SIPEEARPHRDQPFYHLL 61
>gi|456355371|dbj|BAM89816.1| hypothetical protein S58_38260 [Agromonas oligotrophica S58]
Length = 110
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H++F +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 9 FQIGQIVRHRVFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLL 59
>gi|418299545|ref|ZP_12911378.1| hypothetical protein ATCR1_18500 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355535010|gb|EHH04306.1| hypothetical protein ATCR1_18500 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 109
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG+ V HK+F +R V+ +DP + W E ++ QPFY LL
Sbjct: 8 FTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAE-IRPDRDQPFYHLL 58
>gi|402772601|ref|YP_006592138.1| hemimethylated DNA binding protein [Methylocystis sp. SC2]
gi|401774621|emb|CCJ07487.1| Hemimethylated DNA binding protein [Methylocystis sp. SC2]
Length = 110
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H+ + +R VI +DPV + W ++ E+L+ QPFY L
Sbjct: 9 FAIGQVVKHRRYPFRGVIYDVDPVFANTEEWW-LSIPEELRPNKDQPFYHLF 59
>gi|312114435|ref|YP_004012031.1| hemimethylated DNA binding protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219564|gb|ADP70932.1| hemimethylated DNA binding protein [Rhodomicrobium vannielii ATCC
17100]
Length = 118
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
ARFA +G+ V H+ F +R +I +DP + W +A E ++ QPFY LL
Sbjct: 15 ARFA--IGEVVKHRFFPFRGIIFDVDPEFANTDEWW-LAIPEDIRPEKDQPFYHLL 67
>gi|196005633|ref|XP_002112683.1| hypothetical protein TRIADDRAFT_56958 [Trichoplax adhaerens]
gi|190584724|gb|EDV24793.1| hypothetical protein TRIADDRAFT_56958 [Trichoplax adhaerens]
Length = 210
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWME 240
E+ A S +R+GQ + H+ +GYR VI G DPV W++
Sbjct: 84 ENFAKSTIPRTPRPPHVRYRIGQVIRHRQWGYRGVIVGWDPVAKAPKEWLD 134
>gi|169779842|ref|XP_001824385.1| F-box domain protein [Aspergillus oryzae RIB40]
gi|83773125|dbj|BAE63252.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868745|gb|EIT77955.1| F-box domain protein [Aspergillus oryzae 3.042]
Length = 581
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+R+GQ H+ + Y A+I G D C WM +++LQ G Q FY ++
Sbjct: 473 YRIGQVFRHRRYNYIAIITGWDTECDAGEQWMRRMGIDRLQGGRHQSFYHVI 524
>gi|153010957|ref|YP_001372171.1| hemimethylated DNA binding protein [Ochrobactrum anthropi ATCC
49188]
gi|404317892|ref|ZP_10965825.1| hemimethylated DNA binding protein [Ochrobactrum anthropi CTS-325]
gi|151562845|gb|ABS16342.1| hemimethylated DNA binding protein [Ochrobactrum anthropi ATCC
49188]
Length = 112
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H++F +R VI +DP + W E + E+ + QPFY LL
Sbjct: 11 FQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYE-SIPEEARPHRDQPFYHLL 61
>gi|242814624|ref|XP_002486405.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218714744|gb|EED14167.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 534
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E+ +R+GQ H+ + Y+AVI G D C + WM +++L+ G Q FY L
Sbjct: 464 EHQNVKYRVGQVFIHRRYEYQAVITGWDAECDANEEWMRRMGIDQLRAGRKQSFYHAL 521
>gi|417859810|ref|ZP_12504866.1| hypothetical protein Agau_C200872 [Agrobacterium tumefaciens F2]
gi|338822874|gb|EGP56842.1| hypothetical protein Agau_C200872 [Agrobacterium tumefaciens F2]
Length = 116
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG+ V HK+F +R V+ +DP + W E ++ QPFY LL
Sbjct: 15 FTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAE-IRPDRDQPFYHLL 65
>gi|443711607|gb|ELU05313.1| hypothetical protein CAPTEDRAFT_212049 [Capitella teleta]
Length = 226
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
E AS +R+GQ + HK +GYR +I G DP SW++
Sbjct: 100 EYFGASKEPRYPRPPHVKYRVGQVIKHKKWGYRGIIVGWDPYTKAPESWIKEMHPADKPH 159
Query: 250 GPSQPFYQLL 259
+P Y +L
Sbjct: 160 WRKKPSYSVL 169
>gi|433775379|ref|YP_007305846.1| hemimethylated DNA binding domain protein [Mesorhizobium
australicum WSM2073]
gi|433667394|gb|AGB46470.1| hemimethylated DNA binding domain protein [Mesorhizobium
australicum WSM2073]
Length = 111
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A + A+FA +GQ V H++F +R +I +DP + W E + ++ QPFY LL
Sbjct: 4 AMKTAKFA--IGQVVRHRLFPFRGIIFDVDPQFANTDEWYEAIPAD-VRPRKDQPFYHLL 60
>gi|408787092|ref|ZP_11198825.1| hypothetical protein C241_13382 [Rhizobium lupini HPC(L)]
gi|424910561|ref|ZP_18333938.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392846592|gb|EJA99114.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|408487045|gb|EKJ95366.1| hypothetical protein C241_13382 [Rhizobium lupini HPC(L)]
Length = 109
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
NA+F LG+ V HK+F +R V+ +DP + W E ++ QPFY LL
Sbjct: 5 NAKFT--LGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAE-IRPERDQPFYHLL 58
>gi|350561945|ref|ZP_08930782.1| hemimethylated DNA binding protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780263|gb|EGZ34598.1| hemimethylated DNA binding protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 106
Score = 43.5 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V+H+ FGYR VI G+DPV + W E V + + +P+Y +L
Sbjct: 7 FSVGELVHHRKFGYRGVIVGVDPVFAGTDEWYE--AVARSRPPRDRPWYHVL 56
>gi|449550956|gb|EMD41920.1| hypothetical protein CERSUDRAFT_110478 [Ceriporiopsis subvermispora
B]
Length = 620
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 180 LRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWM 239
L +Q +E + + T + A +G H +GY I G +P C S W
Sbjct: 450 LEEQAGDIEKQDEQRAQTKYRRSEHKVAHFVGLVFKHARYGYTGCITGWEPKCAASVEWQ 509
Query: 240 EIAQVEKLQQGPSQPFYQLL 259
+V KL +G QPFY ++
Sbjct: 510 AQMEVFKLPRGAKQPFYTVI 529
>gi|159185436|ref|NP_354756.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|335036424|ref|ZP_08529751.1| hypothetical protein AGRO_3757 [Agrobacterium sp. ATCC 31749]
gi|159140684|gb|AAK87541.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|333792315|gb|EGL63685.1| hypothetical protein AGRO_3757 [Agrobacterium sp. ATCC 31749]
Length = 109
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG+ V HK+F +R V+ +DP + W E ++ QPFY LL
Sbjct: 8 FTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAE-IRPERDQPFYHLL 58
>gi|315499630|ref|YP_004088433.1| hemimethylated DNA binding protein [Asticcacaulis excentricus CB
48]
gi|315417642|gb|ADU14282.1| hemimethylated DNA binding protein [Asticcacaulis excentricus CB
48]
Length = 126
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 193 AASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPS 252
A T ARF +GQ V H +F +R V+ +DP ++ W+ +A E ++
Sbjct: 12 GAYVTGGGDRAARFG--IGQLVRHVLFDFRGVVFDIDPQFSDTEEWL-MAIPEAVRPEKD 68
Query: 253 QPFYQLLRR---ICWL 265
QPFY LL IC++
Sbjct: 69 QPFYHLLAENGDICYV 84
>gi|222148741|ref|YP_002549698.1| hypothetical protein Avi_2374 [Agrobacterium vitis S4]
gi|221735727|gb|ACM36690.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 125
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
L A+ NA+F +G V HK+F +R V+ +DP + W E L+
Sbjct: 10 LTKGNKAMKQRNAKFG--IGDIVRHKVFPFRGVVFDVDPEFANTEEWWNAIPAE-LRPSK 66
Query: 252 SQPFYQLL 259
QPFY LL
Sbjct: 67 DQPFYHLL 74
>gi|169617884|ref|XP_001802356.1| hypothetical protein SNOG_12123 [Phaeosphaeria nodorum SN15]
gi|111059415|gb|EAT80535.1| hypothetical protein SNOG_12123 [Phaeosphaeria nodorum SN15]
Length = 596
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
A F++GQ H+ + Y ++ G D C W++ V+ L +G +Q FY +L
Sbjct: 484 TANVKFKIGQLFQHRRYHYEGIVTGWDVSCDAGEEWIQNMDVDHLPKGRNQAFYHVL 540
>gi|114569720|ref|YP_756400.1| hemimethylated DNA binding protein [Maricaulis maris MCS10]
gi|114340182|gb|ABI65462.1| hemimethylated DNA binding protein [Maricaulis maris MCS10]
Length = 111
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG V H++F +R V+ +DP + W E + E ++ QPFY LL
Sbjct: 8 FGLGDVVRHRLFPFRGVVVDVDPQFANTEEWYE-SIPENVRPSKDQPFYHLL 58
>gi|320168803|gb|EFW45702.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 198
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 191 SLAASATA----LAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEK 246
+LA TA L +N A +G V HK G RAVI DP C W ++ +++
Sbjct: 64 ALAVRPTAVGRLLPRDNPAQAIDVGSFVFHKSSGVRAVIVRSDPQCKRRELWCQLNGIDR 123
Query: 247 LQQGPSQPFYQLL 259
L G +QPFY L
Sbjct: 124 LTHGRNQPFYLAL 136
>gi|217073514|gb|ACJ85117.1| unknown [Medicago truncatula]
Length = 185
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 137 RQLEAKRGLSSKS-----EAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAES 191
R+ ++G+ S+ ++D AL L +LQ AI ENYA AA++RD + L+ +
Sbjct: 2 RRFRTRQGVKSEDAESMLSSEDIALDENTLEEELQNAIAEENYAKAAEIRDTLKNLQKD- 60
Query: 192 LAASATALAFENARF--AFRLGQKVNHKIFGYRAVICGMDPVCC 233
S TA+ N++F +FR N + + + MD VCC
Sbjct: 61 ---SNTAVFGANSKFYDSFR-----NGDLAAMQGMWAKMDEVCC 96
>gi|337268949|ref|YP_004613004.1| hemimethylated DNA binding protein [Mesorhizobium opportunistum
WSM2075]
gi|336029259|gb|AEH88910.1| hemimethylated DNA binding protein [Mesorhizobium opportunistum
WSM2075]
Length = 111
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ A+FA +GQ V H++F +R +I +DP + W E + ++ QPFY LL
Sbjct: 6 KTAKFA--IGQVVRHRLFPFRGIIFDVDPQFANTDEWYEAIPAD-VRPSKDQPFYHLL 60
>gi|430003745|emb|CCF19534.1| conserved hypothetical protein [Rhizobium sp.]
Length = 109
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R V+ +DP S W E ++ QPFY LL
Sbjct: 8 FTIGEVVRHKVFPFRGVVFDVDPEFANSEEWWNAIPAE-IRPNRDQPFYHLL 58
>gi|182679155|ref|YP_001833301.1| hemimethylated DNA binding protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182635038|gb|ACB95812.1| hemimethylated DNA binding protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 109
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H+ + +R VI +DPV + W + A E+++ QPFY L
Sbjct: 8 FGIGQVVRHRKYPFRGVIYDVDPVFANTEEWWQ-AIPEEVRPNKDQPFYHLF 58
>gi|299133926|ref|ZP_07027120.1| hemimethylated DNA binding protein [Afipia sp. 1NLS2]
gi|298591762|gb|EFI51963.1| hemimethylated DNA binding protein [Afipia sp. 1NLS2]
Length = 109
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V H+ F +R VI +DP + W ++ E+++ QPFY LL
Sbjct: 8 FQIGQVVRHRSFSFRGVIFDIDPEFNNTEEWW-LSIPEEMRPHKDQPFYHLL 58
>gi|154253536|ref|YP_001414360.1| hemimethylated DNA-binding protein [Parvibaculum lavamentivorans
DS-1]
gi|154157486|gb|ABS64703.1| hemimethylated DNA binding protein [Parvibaculum lavamentivorans
DS-1]
Length = 110
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+GQ V H+ + +R VI +DP + W ++ E+++ QP+Y LL
Sbjct: 9 FRIGQIVRHRFYPFRGVIFDVDPTFNNTEEWW-LSIPEEVRPRKDQPYYHLL 59
>gi|406862066|gb|EKD15118.1| F-box domain protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 557
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++GQ H+ + Y AVI G D C ++ W+ +++L +G +Q FY L
Sbjct: 506 YKIGQVFRHRRYAYTAVITGWDIECETNTDWLAHNNLDELSRGRNQSFYHAL 557
>gi|13470730|ref|NP_102299.1| hypothetical protein mlr0512 [Mesorhizobium loti MAFF303099]
gi|14021473|dbj|BAB48085.1| mlr0512 [Mesorhizobium loti MAFF303099]
Length = 174
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ A+FA +GQ V H++F +R +I +DP + W E + ++ QPFY LL
Sbjct: 69 KTAKFA--IGQVVRHRLFPFRGIIFDVDPQFANTDEWYEAIPAD-VRPRKDQPFYHLL 123
>gi|427793599|gb|JAA62251.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 660
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+AR A+ +G + HK + Y VI G D C + W+ V L QPFY +L
Sbjct: 522 HARVAYAVGMIMRHKKYHYHCVIYGWDGKCAANRDWIFQMGVHNLSHEDRQPFYNVL 578
>gi|420238861|ref|ZP_14743233.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
CF080]
gi|398084391|gb|EJL75077.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
CF080]
Length = 109
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
NA+F +G+ V HK+F +R V+ +DP + W E ++ QPFY LL
Sbjct: 5 NAKFT--IGEVVRHKVFPFRGVVFDVDPEFANTEEWWNSIPAE-IRPNKDQPFYHLL 58
>gi|357023397|ref|ZP_09085598.1| hypothetical protein MEA186_01968 [Mesorhizobium amorphae
CCNWGS0123]
gi|355544683|gb|EHH13758.1| hypothetical protein MEA186_01968 [Mesorhizobium amorphae
CCNWGS0123]
Length = 107
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R VI +DP + W E + ++ QPFY LL
Sbjct: 6 FSIGQVVRHRLFPFRGVIFDVDPQFANTEEWYEAIPAD-VRPRKDQPFYHLL 56
>gi|296284994|ref|ZP_06862992.1| hypothetical protein CbatJ_15310 [Citromicrobium bathyomarinum
JL354]
Length = 126
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V HK+F +R V+ +DP S W E A E+++ QP+Y L
Sbjct: 25 FGVGDVVRHKMFDFRGVVFDIDPTFANSEEWYE-AIPEQIRPERDQPYYHLF 75
>gi|170748073|ref|YP_001754333.1| hemimethylated DNA binding protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654595|gb|ACB23650.1| hemimethylated DNA binding protein [Methylobacterium radiotolerans
JCM 2831]
Length = 112
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V H+I+ +R V+ +DPV + W ++ E+++ QPFY LL
Sbjct: 11 FAIGAVVRHRIYPFRGVVFDVDPVFDNTEEWW-LSIPEEVRPRKDQPFYHLL 61
>gi|405376113|ref|ZP_11030071.1| hemimethylated DNA binding domain containing protein [Rhizobium sp.
CF142]
gi|397327356|gb|EJJ31663.1| hemimethylated DNA binding domain containing protein [Rhizobium sp.
CF142]
Length = 109
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLL 58
>gi|418937326|ref|ZP_13490977.1| hemimethylated DNA binding protein [Rhizobium sp. PDO1-076]
gi|375055985|gb|EHS52194.1| hemimethylated DNA binding protein [Rhizobium sp. PDO1-076]
Length = 109
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V HK+F +R VI +DP S W E ++ QPFY LL
Sbjct: 8 FGIGDVVRHKVFPFRGVIFDVDPEFANSEEWWNAIPAE-VRPNKDQPFYHLL 58
>gi|323135578|ref|ZP_08070661.1| hemimethylated DNA binding protein [Methylocystis sp. ATCC 49242]
gi|322398669|gb|EFY01188.1| hemimethylated DNA binding protein [Methylocystis sp. ATCC 49242]
Length = 110
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H+ + +R VI +DPV + W ++ E+L+ QPFY L
Sbjct: 9 FAIGQVVKHRRYPFRGVIYDVDPVFANTEEWW-LSIPEELRPRKDQPFYHLF 59
>gi|361128081|gb|EHL00034.1| putative F-box only protein 21 [Glarea lozoyensis 74030]
Length = 630
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++GQ H+ + Y AVI G D C + W+ V+ L +G +Q FY +L
Sbjct: 528 YKVGQVFRHRRYAYMAVIIGWDVECGMNPHWIASNGVDNLSRGRNQSFYHVL 579
>gi|325293157|ref|YP_004279021.1| hypothetical protein AGROH133_06759 [Agrobacterium sp. H13-3]
gi|418408418|ref|ZP_12981734.1| hypothetical protein AT5A_14392 [Agrobacterium tumefaciens 5A]
gi|325061010|gb|ADY64701.1| hypothetical protein AGROH133_06759 [Agrobacterium sp. H13-3]
gi|358005332|gb|EHJ97658.1| hypothetical protein AT5A_14392 [Agrobacterium tumefaciens 5A]
Length = 109
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG+ V HK+F +R V+ +DP + W + ++ QPFY LL
Sbjct: 8 FTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAD-IRPERDQPFYHLL 58
>gi|409437386|ref|ZP_11264500.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408750814|emb|CCM75656.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 109
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLL 58
>gi|298291685|ref|YP_003693624.1| hemimethylated DNA binding protein [Starkeya novella DSM 506]
gi|296928196|gb|ADH89005.1| hemimethylated DNA binding protein [Starkeya novella DSM 506]
Length = 110
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+R+GQ V H+ + +R V+ +DP + W E + E ++ QPFY LL
Sbjct: 9 YRIGQIVRHRHYPFRGVVFDVDPEFANTDEWWE-SIPEHIRPTKDQPFYHLL 59
>gi|190891746|ref|YP_001978288.1| hypothetical protein RHECIAT_CH0002152 [Rhizobium etli CIAT 652]
gi|218507615|ref|ZP_03505493.1| hypothetical protein RetlB5_08375 [Rhizobium etli Brasil 5]
gi|417097316|ref|ZP_11959123.1| hypothetical protein RHECNPAF_169001 [Rhizobium etli CNPAF512]
gi|190697025|gb|ACE91110.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327193320|gb|EGE60224.1| hypothetical protein RHECNPAF_169001 [Rhizobium etli CNPAF512]
Length = 109
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLL 58
>gi|399039371|ref|ZP_10734975.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
CF122]
gi|398062659|gb|EJL54429.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
CF122]
Length = 109
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLL 58
>gi|86357720|ref|YP_469612.1| hypothetical protein RHE_CH02101 [Rhizobium etli CFN 42]
gi|421588989|ref|ZP_16034201.1| hypothetical protein RCCGEPOP_09454 [Rhizobium sp. Pop5]
gi|86281822|gb|ABC90885.1| hypothetical conserved protein [Rhizobium etli CFN 42]
gi|403706172|gb|EJZ21532.1| hypothetical protein RCCGEPOP_09454 [Rhizobium sp. Pop5]
Length = 109
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLL 58
>gi|218461386|ref|ZP_03501477.1| hypothetical protein RetlK5_18627 [Rhizobium etli Kim 5]
gi|218660052|ref|ZP_03515982.1| hypothetical protein RetlI_10617 [Rhizobium etli IE4771]
Length = 109
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLL 58
>gi|115403031|ref|XP_001217592.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189438|gb|EAU31138.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 491
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL---RRICW 264
+R+GQ H+ + Y +I G D C WM V++L G Q FY +L R + +
Sbjct: 383 YRVGQVFRHRRYNYVGIIIGWDTECDAGEQWMRRMGVDRLAGGRHQSFYHVLVEDRSVRY 442
Query: 265 LLTNQTW 271
+ W
Sbjct: 443 VAEENIW 449
>gi|156363269|ref|XP_001625968.1| predicted protein [Nematostella vectensis]
gi|156212826|gb|EDO33868.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 31/74 (41%)
Query: 186 KLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVE 245
K A SA + + +R+GQ + HK++ YRAVI G DP W +
Sbjct: 74 KDPAGHFGMSAEVRSPRPSNVKYRVGQVIRHKLWNYRAVIVGWDPKLKAPDFWRDANHPA 133
Query: 246 KLQQGPSQPFYQLL 259
+ P Y LL
Sbjct: 134 DKKHWKDMPNYALL 147
>gi|156546078|ref|XP_001601019.1| PREDICTED: F-box only protein 21-like [Nasonia vitripennis]
Length = 617
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G ++H+ +GY VI G D C + W+ VE+L G QPFY +
Sbjct: 501 FAIGMIMSHERYGYLCVITGWDLKCEATPEWINEMGVEELSGGRKQPFYNVF 552
>gi|110634049|ref|YP_674257.1| hemimethylated DNA binding protein [Chelativorans sp. BNC1]
gi|110285033|gb|ABG63092.1| hemimethylated DNA binding protein [Chelativorans sp. BNC1]
Length = 110
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R VI +DP + W + E ++ QPFY LL
Sbjct: 9 FSIGQVVRHRLFPFRGVIFDIDPEFNNTEEWYQAIPAE-VRPSKDQPFYHLL 59
>gi|344323312|gb|AEN14437.1| conserved hypothetical protein [Lentinula edodes]
Length = 622
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 187 LEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMD-PVCCESSSWMEIAQVE 245
LE E++ A L N + +G H+ Y A+I G D PV S SW+ ++
Sbjct: 445 LEEEAITAQEVKLRTPNTTVRYFVGMLFEHRSLCYTALITGWDHPVM--SKSWIRETEIS 502
Query: 246 KLQQGPSQPFYQLLR 260
L +G QP Y +LR
Sbjct: 503 DLPRGRDQPCYHVLR 517
>gi|402826752|ref|ZP_10875912.1| hemimethylated DNA-binding protein [Sphingomonas sp. LH128]
gi|402259708|gb|EJU09911.1| hemimethylated DNA-binding protein [Sphingomonas sp. LH128]
Length = 126
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
ARFA +G V H++ +R V+ +DPV S W + E ++ QPFY LL
Sbjct: 23 ARFA--IGDVVRHRLHDFRGVVFDIDPVFANSEEWYQAIPAE-VRPKRDQPFYHLL 75
>gi|359398262|ref|ZP_09191285.1| hemimethylated DNA-binding region protein [Novosphingobium
pentaromativorans US6-1]
gi|357600353|gb|EHJ62049.1| hemimethylated DNA-binding region protein [Novosphingobium
pentaromativorans US6-1]
Length = 126
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
ARFA +G V HK +R VI +DPV S W + +E L+ QP+Y LL
Sbjct: 23 ARFA--IGDVVRHKQHDFRGVIFDIDPVFANSEEWYQSIPLE-LRPSREQPYYHLL 75
>gi|255600173|ref|XP_002537402.1| conserved hypothetical protein [Ricinus communis]
gi|223516486|gb|EEF24982.1| conserved hypothetical protein [Ricinus communis]
Length = 115
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 14 FGIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLL 64
>gi|319783565|ref|YP_004143041.1| hemimethylated DNA binding protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169453|gb|ADV12991.1| hemimethylated DNA binding protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 111
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ A+FA +GQ V H++F +R +I +DP + W E + ++ QPFY LL
Sbjct: 6 KTAKFA--IGQVVRHRLFPFRGIIFDVDPQFANTDEWYEAIPAD-VRPRKDQPFYHLL 60
>gi|334141172|ref|YP_004534378.1| hemimethylated DNA-binding protein [Novosphingobium sp. PP1Y]
gi|333939202|emb|CCA92560.1| hemimethylated DNA-binding region protein [Novosphingobium sp.
PP1Y]
Length = 126
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
ARFA +G V HK +R VI +DPV S W + +E L+ QP+Y LL
Sbjct: 23 ARFA--IGDVVRHKQHDFRGVIFDIDPVFANSEEWYQSIPLE-LRPSREQPYYHLL 75
>gi|310817200|ref|YP_003965164.1| Heat shock protein hspQ [Ketogulonicigenium vulgare Y25]
gi|308755935|gb|ADO43864.1| Heat shock protein hspQ [Ketogulonicigenium vulgare Y25]
Length = 108
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R F LGQ V H++ +R V+ +DP S W + + E ++ QPFY LL
Sbjct: 5 RAKFHLGQIVRHRVHQFRGVVFDVDPEFANSEGWYQ-SIPEDIRPRKDQPFYHLL 58
>gi|283781590|ref|YP_003372345.1| UvrB/UvrC protein [Pirellula staleyi DSM 6068]
gi|283440043|gb|ADB18485.1| UvrB/UvrC protein [Pirellula staleyi DSM 6068]
Length = 171
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 141 AKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
KR + S SE D +IRLR ++++A+D E+Y A+ LRD+I ++E E
Sbjct: 119 GKRPVGS-SEGTDAQTDLIRLRREMKEAVDREDYEQASKLRDEIRRVETE 167
>gi|424890413|ref|ZP_18314012.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393172631|gb|EJC72676.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM2012]
Length = 109
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLL 58
>gi|218532174|ref|YP_002422990.1| hemimethylated DNA binding protein [Methylobacterium extorquens
CM4]
gi|240140729|ref|YP_002965209.1| DNA-binding protein, hemimethylated (yccV-like) [Methylobacterium
extorquens AM1]
gi|218524477|gb|ACK85062.1| hemimethylated DNA binding protein [Methylobacterium extorquens
CM4]
gi|240010706|gb|ACS41932.1| putative DNA-binding protein, hemimethylated (yccV-like)
[Methylobacterium extorquens AM1]
Length = 112
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG V H+I+ +R V+ +DP + W +A E ++ QPFY LL
Sbjct: 11 FGLGAVVRHRIYPFRGVVFDVDPEFANTEEWW-LAIPEDVRPRKDQPFYHLL 61
>gi|291223575|ref|XP_002731786.1| PREDICTED: F-box only protein 21-like [Saccoglossus kowalevskii]
Length = 596
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+N F +G + HK++ Y VI G D +C W+ V L + QPFY +L
Sbjct: 473 DNNEVQFSVGMIMKHKLYSYVCVIYGWDSLCKMPEDWIIQMGVYNLPKKEKQPFYNVL 530
>gi|424895009|ref|ZP_18318583.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393179236|gb|EJC79275.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 109
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLL 58
>gi|163853317|ref|YP_001641360.1| hemimethylated DNA binding protein [Methylobacterium extorquens
PA1]
gi|254563240|ref|YP_003070335.1| DNA-binding protein, hemimethylated [Methylobacterium extorquens
DM4]
gi|418063669|ref|ZP_12701311.1| hemimethylated DNA binding protein [Methylobacterium extorquens DSM
13060]
gi|163664922|gb|ABY32289.1| hemimethylated DNA binding protein [Methylobacterium extorquens
PA1]
gi|254270518|emb|CAX26521.1| putative DNA-binding protein, hemimethylated (yccV-like)
[Methylobacterium extorquens DM4]
gi|373557362|gb|EHP83794.1| hemimethylated DNA binding protein [Methylobacterium extorquens DSM
13060]
Length = 124
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG V H+I+ +R V+ +DP + W +A E ++ QPFY LL
Sbjct: 23 FGLGAVVRHRIYPFRGVVFDVDPEFANTEEWW-LAIPEDVRPRKDQPFYHLL 73
>gi|402487709|ref|ZP_10834527.1| hemimethylated DNA binding protein [Rhizobium sp. CCGE 510]
gi|401813578|gb|EJT05922.1| hemimethylated DNA binding protein [Rhizobium sp. CCGE 510]
Length = 109
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLL 58
>gi|424881571|ref|ZP_18305203.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WU95]
gi|392517934|gb|EIW42666.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WU95]
Length = 109
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLL 58
>gi|114704736|ref|ZP_01437644.1| hypothetical protein FP2506_07366 [Fulvimarina pelagi HTCC2506]
gi|114539521|gb|EAU42641.1| hypothetical protein FP2506_07366 [Fulvimarina pelagi HTCC2506]
Length = 143
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 195 SATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQP 254
+ + + ARF +GQ V H+++ +R VI +DPV + W E E ++ QP
Sbjct: 31 NGVEFSMQTARFF--IGQIVKHRVYPFRGVIFDVDPVFDNTEEWYEAIPAE-VRPRKDQP 87
Query: 255 FYQLL 259
FY L
Sbjct: 88 FYHLF 92
>gi|23012279|ref|ZP_00052404.1| COG3785: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 124
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG V H+I+ +R V+ +DP + W +A E+++ QPFY LL
Sbjct: 23 FGLGAVVRHRIYPFRGVVFDVDPEFSNTEEWW-LAIPEEVRPRKDQPFYHLL 73
>gi|188583582|ref|YP_001927027.1| hemimethylated DNA binding protein [Methylobacterium populi BJ001]
gi|179347080|gb|ACB82492.1| hemimethylated DNA binding protein [Methylobacterium populi BJ001]
Length = 112
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F LG V H+I+ +R V+ +DP + W +A E ++ QPFY LL
Sbjct: 11 FGLGAVVRHRIYPFRGVVFDVDPEFANTEEWW-LAIPEDVRPRKDQPFYHLL 61
>gi|255262310|ref|ZP_05341652.1| hemimethylated DNA binding protein [Thalassiobium sp. R2A62]
gi|255104645|gb|EET47319.1| hemimethylated DNA binding protein [Thalassiobium sp. R2A62]
Length = 108
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R + LGQ V H+ +R V+ +DP + W E A E+ + QPFY LL
Sbjct: 4 TRAKYYLGQVVRHRKHPFRGVVFDVDPTFSNTDDWYE-AIPEEARPAKDQPFYHLL 58
>gi|116252143|ref|YP_767981.1| hypothetical protein RL2391 [Rhizobium leguminosarum bv. viciae
3841]
gi|209549331|ref|YP_002281248.1| hemimethylated DNA binding protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|241204644|ref|YP_002975740.1| hemimethylated DNA binding protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|424870617|ref|ZP_18294279.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|424913988|ref|ZP_18337352.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|115256791|emb|CAK07881.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
gi|209535087|gb|ACI55022.1| hemimethylated DNA binding protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|240858534|gb|ACS56201.1| hemimethylated DNA binding protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|392850164|gb|EJB02685.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|393166318|gb|EJC66365.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 109
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLL 58
>gi|196010724|ref|XP_002115226.1| hypothetical protein TRIADDRAFT_59192 [Trichoplax adhaerens]
gi|190581997|gb|EDV22071.1| hypothetical protein TRIADDRAFT_59192 [Trichoplax adhaerens]
Length = 591
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++G + H+ + Y VI G D C + +W+ V+ L G QPFY +L
Sbjct: 486 YKVGMMMQHRRYNYTCVIYGWDYECRMTQAWVTQMGVDMLPNGTKQPFYNVL 537
>gi|398828368|ref|ZP_10586569.1| hemimethylated DNA binding domain containing protein
[Phyllobacterium sp. YR531]
gi|398218403|gb|EJN04913.1| hemimethylated DNA binding domain containing protein
[Phyllobacterium sp. YR531]
Length = 113
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F++GQ V+H+IF +R +I +DP + W + E ++ QPFY L
Sbjct: 12 FQIGQVVSHRIFAFRGLIFDVDPEFNNTEEWYR-SIPEDIRPRRDQPFYHLF 62
>gi|386817369|ref|ZP_10104587.1| hemimethylated DNA binding protein [Thiothrix nivea DSM 5205]
gi|386421945|gb|EIJ35780.1| hemimethylated DNA binding protein [Thiothrix nivea DSM 5205]
Length = 109
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+F +GQ ++H++F YR VI +DP + W E VE +P+Y +L
Sbjct: 8 SFGIGQVIHHRLFNYRGVIFDVDPDFQGTEEWFE-KNVEAGNPSKEEPWYHVL 59
>gi|150396604|ref|YP_001327071.1| hemimethylated DNA binding protein [Sinorhizobium medicae WSM419]
gi|150028119|gb|ABR60236.1| hemimethylated DNA binding protein [Sinorhizobium medicae WSM419]
Length = 109
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R VI +DP + W A ++++ QPFY L
Sbjct: 8 FEIGQVVRHRMFPFRGVIFDVDPEYANTDEWWN-AIPQEIRPEKDQPFYHLF 58
>gi|399064997|ref|ZP_10747705.1| hemimethylated DNA binding domain containing protein
[Novosphingobium sp. AP12]
gi|398030202|gb|EJL23630.1| hemimethylated DNA binding domain containing protein
[Novosphingobium sp. AP12]
Length = 126
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
ARFA +G V H++ +R V+ +DPV S W + E ++ QPFY LL
Sbjct: 23 ARFA--IGDVVRHRLHDFRGVVFDIDPVFANSEEWYQSIPAE-VRPTREQPFYHLL 75
>gi|90419670|ref|ZP_01227580.1| putative Hemimethylated DNA-binding region [Aurantimonas
manganoxydans SI85-9A1]
gi|90336607|gb|EAS50348.1| putative Hemimethylated DNA-binding region [Aurantimonas
manganoxydans SI85-9A1]
Length = 107
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R VI +DP S W E + ++ QPFY L
Sbjct: 6 FFIGQVVKHRVFPFRGVIFDVDPEFDNSDEWYESIPAD-VRPRKDQPFYHLF 56
>gi|209885325|ref|YP_002289182.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM5]
gi|337741054|ref|YP_004632782.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM5]
gi|386030071|ref|YP_005950846.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM4]
gi|209873521|gb|ACI93317.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM5]
gi|336095139|gb|AEI02965.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM4]
gi|336098718|gb|AEI06541.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM5]
Length = 109
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R VI +D + W ++ E+L+ QPFY LL
Sbjct: 8 FHIGQIVRHRVFSFRGVIFDIDGEFNNTEEWW-LSIPEELRPEKDQPFYHLL 58
>gi|153870135|ref|ZP_01999596.1| Hemimethylated DNA-binding region [Beggiatoa sp. PS]
gi|152073396|gb|EDN70401.1| Hemimethylated DNA-binding region [Beggiatoa sp. PS]
Length = 104
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F YR VI +DP S W ++ V K QP+Y++L
Sbjct: 7 FFIGQLVTHQLFQYRGVIIDVDPYFMLSEQWYDV--VAKSHPPKDQPWYRVL 56
>gi|341614818|ref|ZP_08701687.1| hypothetical protein CJLT1_07673 [Citromicrobium sp. JLT1363]
Length = 126
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V HK+F +R V+ +DP S W E A + ++ QP+Y L
Sbjct: 25 FGVGDVVRHKMFDFRGVVFDIDPTFANSEEWYE-AIPQDIRPERDQPYYHLF 75
>gi|222085978|ref|YP_002544510.1| hypothetical protein Arad_2371 [Agrobacterium radiobacter K84]
gi|221723426|gb|ACM26582.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 115
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 198 ALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQ 257
A+ NA+F +G V H++F +R VI +DP + W +E ++ QPFY
Sbjct: 6 AMKQRNAKF--NIGDVVRHRMFPFRGVIFDVDPEFANTEEWWNSIPME-VRPSKDQPFYH 62
Query: 258 LL 259
LL
Sbjct: 63 LL 64
>gi|163745447|ref|ZP_02152807.1| hypothetical protein OIHEL45_07650 [Oceanibulbus indolifex HEL-45]
gi|161382265|gb|EDQ06674.1| hypothetical protein OIHEL45_07650 [Oceanibulbus indolifex HEL-45]
Length = 108
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R + LGQ V HK +R VI +DP + W E A E+ + QPFY LL
Sbjct: 4 TRAKYHLGQIVRHKKHPFRGVIFDVDPEFANTEEWYE-AIPEESRPVKDQPFYHLL 58
>gi|398378742|ref|ZP_10536898.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
AP16]
gi|397724394|gb|EJK84865.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
AP16]
Length = 109
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V H++F +R VI +DP + W +E ++ QPFY LL
Sbjct: 8 FNIGDVVRHRMFPFRGVIFDVDPEFANTEEWWNSIPME-VRPSKDQPFYHLL 58
>gi|163751555|ref|ZP_02158777.1| hypothetical protein KT99_01122 [Shewanella benthica KT99]
gi|161328563|gb|EDP99716.1| hypothetical protein KT99_01122 [Shewanella benthica KT99]
Length = 109
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 196 ATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPF 255
T NA+F+ +G ++H++FGYR VI +D + +W E QV K + ++P+
Sbjct: 2 GTVTNITNAKFS--VGDLIHHRLFGYRGVIVDVDLNFQLTDNWYE--QVAKSRPPKNKPW 57
Query: 256 YQLL 259
Y +L
Sbjct: 58 YSVL 61
>gi|217978379|ref|YP_002362526.1| hemimethylated DNA binding protein [Methylocella silvestris BL2]
gi|217503755|gb|ACK51164.1| hemimethylated DNA binding protein [Methylocella silvestris BL2]
Length = 109
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H+ + +R VI +DPV + W + + E+++ QPFY L
Sbjct: 8 FGIGQVVKHRKYPFRGVIYDVDPVFSNTDEWWQ-SIPEEVRPRKDQPFYHLF 58
>gi|15965394|ref|NP_385747.1| hypothetical protein SMc00949 [Sinorhizobium meliloti 1021]
gi|334316278|ref|YP_004548897.1| hemimethylated DNA binding protein [Sinorhizobium meliloti AK83]
gi|384529461|ref|YP_005713549.1| hemimethylated DNA binding protein [Sinorhizobium meliloti BL225C]
gi|384536211|ref|YP_005720296.1| hypothetical protein SM11_chr1767 [Sinorhizobium meliloti SM11]
gi|407720589|ref|YP_006840251.1| hypothetical protein BN406_01380 [Sinorhizobium meliloti Rm41]
gi|418400445|ref|ZP_12973985.1| hemimethylated DNA binding protein [Sinorhizobium meliloti
CCNWSX0020]
gi|433613423|ref|YP_007190221.1| hemimethylated DNA binding domain protein [Sinorhizobium meliloti
GR4]
gi|15074574|emb|CAC46220.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|333811637|gb|AEG04306.1| hemimethylated DNA binding protein [Sinorhizobium meliloti BL225C]
gi|334095272|gb|AEG53283.1| hemimethylated DNA binding protein [Sinorhizobium meliloti AK83]
gi|336033103|gb|AEH79035.1| hypothetical protein SM11_chr1767 [Sinorhizobium meliloti SM11]
gi|359505497|gb|EHK78019.1| hemimethylated DNA binding protein [Sinorhizobium meliloti
CCNWSX0020]
gi|407318821|emb|CCM67425.1| hypothetical protein BN406_01380 [Sinorhizobium meliloti Rm41]
gi|429551613|gb|AGA06622.1| hemimethylated DNA binding domain protein [Sinorhizobium meliloti
GR4]
Length = 109
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V H++F +R V+ +DP + W A ++++ QPFY L
Sbjct: 8 FEIGQVVRHRMFPFRGVVFDVDPEYANTEEWWN-AIPQEIRPEKDQPFYHLF 58
>gi|313231121|emb|CBY19119.1| unnamed protein product [Oikopleura dioica]
Length = 261
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
FR+GQ HK GY V+ G D C ++W + + QPFY +L
Sbjct: 143 FRVGQVFKHKTLGYYGVVVGWDETCKAPAAWQQQMLGANWKIKCQQPFYAVL 194
>gi|297819718|ref|XP_002877742.1| hypothetical protein ARALYDRAFT_485388 [Arabidopsis lyrata subsp.
lyrata]
gi|297323580|gb|EFH54001.1| hypothetical protein ARALYDRAFT_485388 [Arabidopsis lyrata subsp.
lyrata]
Length = 2182
Score = 40.8 bits (94), Expect = 0.91, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR-------- 162
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ +
Sbjct: 552 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKESADVVDW 611
Query: 163 ADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQK 213
D ++ +D + DL I S +SAT+ + F F QK
Sbjct: 612 EDSERMVDRITTSSTLDLSVPI-----RSFESSATSQFSRDGSFGFPDRQK 657
>gi|300114815|ref|YP_003761390.1| hemimethylated DNA-binding protein [Nitrosococcus watsonii C-113]
gi|299540752|gb|ADJ29069.1| hemimethylated DNA binding protein [Nitrosococcus watsonii C-113]
Length = 105
Score = 40.8 bits (94), Expect = 0.94, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E A+ F +GQ V HK+F YR V+ DP S W E + Q +P+Y +L
Sbjct: 2 EQAKAKFAIGQVVRHKLFHYRGVVVDADPSFQGSPEWYE--HMACSQPPKDRPWYHIL 57
>gi|408379640|ref|ZP_11177233.1| hypothetical protein QWE_18649 [Agrobacterium albertimagni AOL15]
gi|407746451|gb|EKF57974.1| hypothetical protein QWE_18649 [Agrobacterium albertimagni AOL15]
Length = 109
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V HK F +R VI +DP S W E ++ QPFY LL
Sbjct: 8 FGIGDVVRHKFFPFRGVIFDVDPEFANSEEWWNAIPAE-VRPHKDQPFYHLL 58
>gi|378825959|ref|YP_005188691.1| Hemimethylated DNA-binding protein [Sinorhizobium fredii HH103]
gi|365179011|emb|CCE95866.1| Hemimethylated DNA-binding protein [Sinorhizobium fredii HH103]
Length = 109
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWME-IAQVEKLQQGPSQPFYQLL 259
F +GQ V H+ F +R VI +DP + W I Q +++ QPFY L
Sbjct: 8 FEIGQIVRHRFFPFRGVIFDVDPEYANTEEWWNSIPQ--EIRPSKDQPFYHLF 58
>gi|227822027|ref|YP_002825998.1| hemimethylated DNA-binding region [Sinorhizobium fredii NGR234]
gi|227341027|gb|ACP25245.1| hemimethylated DNA-binding region [Sinorhizobium fredii NGR234]
Length = 109
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWME-IAQVEKLQQGPSQPFYQLL 259
F +GQ V H+ F +R VI +DP + W I Q +++ QPFY L
Sbjct: 8 FEIGQIVRHRFFPFRGVIFDVDPEYANTEEWWNSIPQ--EIRPSKDQPFYHLF 58
>gi|297182580|gb|ADI18740.1| uncharacterized conserved protein [uncultured Rhizobiales bacterium
HF4000_32B18]
Length = 104
Score = 40.4 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQL 258
F +GQ V H++F Y VI +D V E+ +W + E + QPFY++
Sbjct: 9 FNIGQAVRHRVFDYAGVIVDIDAVFGETDAWYQAIPAEN-RPNRDQPFYRV 58
>gi|289208401|ref|YP_003460467.1| hemimethylated DNA binding protein [Thioalkalivibrio sp. K90mix]
gi|288944032|gb|ADC71731.1| hemimethylated DNA binding protein [Thioalkalivibrio sp. K90mix]
Length = 106
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G+ V+H FGYR VI +DPV S W E V + + +P+Y +L
Sbjct: 7 FTVGELVHHTKFGYRGVIVEVDPVYSGSDEWYE--TVARSRPPKDRPWYHVL 56
>gi|398353533|ref|YP_006398997.1| hemimethylated DNA-binding region [Sinorhizobium fredii USDA 257]
gi|390128859|gb|AFL52240.1| hemimethylated DNA-binding region [Sinorhizobium fredii USDA 257]
Length = 109
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWME-IAQVEKLQQGPSQPFYQLL 259
F +GQ V H+ F +R VI +DP + W I Q +++ QPFY L
Sbjct: 8 FEIGQIVRHRFFPFRGVIFDVDPEYANTEEWWNSIPQ--EIRPSKDQPFYHLF 58
>gi|440226625|ref|YP_007333716.1| hemimethylated DNA binding protein [Rhizobium tropici CIAT 899]
gi|440038136|gb|AGB71170.1| hemimethylated DNA binding protein [Rhizobium tropici CIAT 899]
Length = 109
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G V H++F +R VI +DP + W E ++ QPFY LL
Sbjct: 8 FNIGDVVRHRMFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPDKDQPFYHLL 58
>gi|260427828|ref|ZP_05781807.1| hemimethylated DNA binding protein [Citreicella sp. SE45]
gi|260422320|gb|EEX15571.1| hemimethylated DNA binding protein [Citreicella sp. SE45]
Length = 114
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 196 ATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPF 255
A +A R + LGQ V H+ +R V+ +DP + W E A E + QPF
Sbjct: 2 AQEVAMHTQRAKYHLGQVVRHRKHPFRGVVFDVDPEFSNTEEWYE-AIPEDSRPVRDQPF 60
Query: 256 YQLL 259
Y LL
Sbjct: 61 YHLL 64
>gi|77164386|ref|YP_342911.1| hemimethylated DNA-binding region [Nitrosococcus oceani ATCC 19707]
gi|254434807|ref|ZP_05048315.1| hypothetical protein NOC27_1738 [Nitrosococcus oceani AFC27]
gi|76882700|gb|ABA57381.1| Hemimethylated DNA-binding region [Nitrosococcus oceani ATCC 19707]
gi|207091140|gb|EDZ68411.1| hypothetical protein NOC27_1738 [Nitrosococcus oceani AFC27]
Length = 105
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
E A+ F +GQ V HK+F YR V+ DP S W E + Q +P+Y +L
Sbjct: 2 EQAKAKFTIGQIVRHKLFHYRGVVVDADPSFQGSPEWYE--HMACSQPPKDRPWYHVL 57
>gi|346993101|ref|ZP_08861173.1| hypothetical protein RTW15_09346 [Ruegeria sp. TW15]
Length = 108
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+RLGQ V HK +R VI +DP S W + A E + QPFY LL
Sbjct: 8 YRLGQVVRHKRHPFRGVIFDVDPEFSNSEEWYQ-AIPEDSRPLKDQPFYHLL 58
>gi|302698103|ref|XP_003038730.1| hypothetical protein SCHCODRAFT_104151 [Schizophyllum commune H4-8]
gi|300112427|gb|EFJ03828.1| hypothetical protein SCHCODRAFT_104151, partial [Schizophyllum
commune H4-8]
Length = 602
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G H +GY VI G C SW+ V+ L +G +QPFY +
Sbjct: 471 YFVGMIFRHVRYGYTGVITGWSSTCESPESWIHQMGVDHLPRGRNQPFYHVF 522
>gi|307109790|gb|EFN58027.1| hypothetical protein CHLNCDRAFT_142233 [Chlorella variabilis]
Length = 271
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ HK +G+R V+ G D C W V Q P QPFY L
Sbjct: 117 FAVGQVFIHKKYGFRGVVYGWDRECQRDEDWQRAMNV----QHPHQPFYYCL 164
>gi|254485913|ref|ZP_05099118.1| hypothetical protein RGAI101_569 [Roseobacter sp. GAI101]
gi|214042782|gb|EEB83420.1| hypothetical protein RGAI101_569 [Roseobacter sp. GAI101]
Length = 108
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
R + LGQ V HK +R VI +DP + W E A E+ + QP+Y LL
Sbjct: 4 TRAKYHLGQVVRHKKHPFRGVIFDVDPEFANTDEWYE-AIPEESRPVKDQPYYHLL 58
>gi|296121028|ref|YP_003628806.1| UvrB/UvrC protein [Planctomyces limnophilus DSM 3776]
gi|296013368|gb|ADG66607.1| UvrB/UvrC protein [Planctomyces limnophilus DSM 3776]
Length = 173
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 123 QLRNKLTEVEEEISRQLEAKRGLSSK-SEAQDKALSIIRLRADLQKAIDSENYALAADLR 181
R +LT + E I +++ + + +A + +IRL+ L++AID ENY AA LR
Sbjct: 97 HFREELTRLIENIHSEVQHVGKVPKRQPDASRQQFDLIRLKLQLKEAIDEENYEKAAGLR 156
Query: 182 DQICKLEAESLAASATA 198
DQI ++E E L +S+ A
Sbjct: 157 DQIRQVELE-LRSSSPA 172
>gi|115449137|ref|NP_001048348.1| Os02g0788500 [Oryza sativa Japonica Group]
gi|113537879|dbj|BAF10262.1| Os02g0788500 [Oryza sativa Japonica Group]
gi|215692516|dbj|BAG87936.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737625|dbj|BAG96755.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191718|gb|EEC74145.1| hypothetical protein OsI_09224 [Oryza sativa Indica Group]
gi|222623813|gb|EEE57945.1| hypothetical protein OsJ_08664 [Oryza sativa Japonica Group]
Length = 240
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 146 SSKSEAQDKALSIIR----LRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAF 201
S ++E SI R L+ DLQ AI ENYA AA LRD++ L+ +S +A A
Sbjct: 66 SGEAEGSPSTESITRDEETLQRDLQTAIQEENYAQAAKLRDELRVLQEDSRSAVLAA--- 122
Query: 202 ENARF--AFRLGQKV 214
NARF AF+ G V
Sbjct: 123 -NARFYNAFKNGDLV 136
>gi|47497763|dbj|BAD19863.1| unknown protein [Oryza sativa Japonica Group]
Length = 231
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 146 SSKSEAQDKALSIIR----LRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAF 201
S ++E SI R L+ DLQ AI ENYA AA LRD++ L+ +S +A A
Sbjct: 57 SGEAEGSPSTESITRDEETLQRDLQTAIQEENYAQAAKLRDELRVLQEDSRSAVLAA--- 113
Query: 202 ENARF--AFRLGQKV 214
NARF AF+ G V
Sbjct: 114 -NARFYNAFKNGDLV 127
>gi|265986547|ref|ZP_06099104.1| hemimethylated DNA binding protein [Brucella pinnipedialis
M292/94/1]
gi|265996239|ref|ZP_06108796.1| hemimethylated DNA binding protein [Brucella ceti M490/95/1]
gi|262550536|gb|EEZ06697.1| hemimethylated DNA binding protein [Brucella ceti M490/95/1]
gi|264658744|gb|EEZ29005.1| hemimethylated DNA binding protein [Brucella pinnipedialis
M292/94/1]
Length = 110
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++GQ V H++F +R VI +DP + W + E + QPFY LL
Sbjct: 9 YQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLL 59
>gi|56459822|ref|YP_155103.1| hypothetical protein IL0713 [Idiomarina loihiensis L2TR]
gi|56178832|gb|AAV81554.1| Uncharacterized conserved protein [Idiomarina loihiensis L2TR]
Length = 103
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ + H ++GYR VI DP S SW K QP+Y +L
Sbjct: 6 FSIGQLITHSLYGYRGVIIDADPCFTLSDSWYNKMATSK--PAKDQPWYHIL 55
>gi|265989887|ref|ZP_06102444.1| hemimethylated DNA binding protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993007|ref|ZP_06105564.1| hemimethylated DNA binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|262763877|gb|EEZ09909.1| hemimethylated DNA binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000556|gb|EEZ13246.1| hemimethylated DNA binding protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 110
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++GQ V H++F +R VI +DP + W + E + QPFY LL
Sbjct: 9 YQIGQVVQHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLL 59
>gi|23500318|ref|NP_699758.1| hypothetical protein BRA0574 [Brucella suis 1330]
gi|161620636|ref|YP_001594522.1| hemimethylated DNA binding domain-containing protein [Brucella
canis ATCC 23365]
gi|163844726|ref|YP_001622381.1| hemimethylated DNA binding domain-containing protein [Brucella suis
ATCC 23445]
gi|225629069|ref|ZP_03787102.1| hemimethylated DNA binding domain-containing protein [Brucella ceti
str. Cudo]
gi|256015350|ref|YP_003105359.1| hypothetical protein BMI_II568 [Brucella microti CCM 4915]
gi|260568139|ref|ZP_05838608.1| hemimethylated DNA binding protein [Brucella suis bv. 4 str. 40]
gi|261217190|ref|ZP_05931471.1| hemimethylated DNA binding protein [Brucella ceti M13/05/1]
gi|261220410|ref|ZP_05934691.1| hemimethylated DNA binding protein [Brucella ceti B1/94]
gi|261318749|ref|ZP_05957946.1| hemimethylated DNA binding protein [Brucella pinnipedialis B2/94]
gi|261320061|ref|ZP_05959258.1| hemimethylated DNA binding protein [Brucella ceti M644/93/1]
gi|261750283|ref|ZP_05993992.1| hemimethylated DNA binding protein [Brucella suis bv. 5 str. 513]
gi|261753556|ref|ZP_05997265.1| hemimethylated DNA binding protein [Brucella suis bv. 3 str. 686]
gi|261756780|ref|ZP_06000489.1| hemimethylated DNA binding protein [Brucella sp. F5/99]
gi|265985458|ref|ZP_06098193.1| hemimethylated DNA binding protein [Brucella sp. 83/13]
gi|294853629|ref|ZP_06794301.1| hemimethylated DNA binding domain-containing protein [Brucella sp.
NVSL 07-0026]
gi|306839700|ref|ZP_07472503.1| hemimethylated DNA binding protein [Brucella sp. NF 2653]
gi|306841778|ref|ZP_07474464.1| hemimethylated DNA binding protein [Brucella sp. BO2]
gi|306845906|ref|ZP_07478474.1| hemimethylated DNA binding protein [Brucella inopinata BO1]
gi|340792358|ref|YP_004757822.1| hypothetical protein BPI_II626 [Brucella pinnipedialis B2/94]
gi|376276727|ref|YP_005152788.1| hemimethylated DNA binding protein [Brucella canis HSK A52141]
gi|376278540|ref|YP_005108573.1| hypothetical protein BSVBI22_B0568 [Brucella suis VBI22]
gi|384223101|ref|YP_005614266.1| hypothetical protein BS1330_II0569 [Brucella suis 1330]
gi|23463931|gb|AAN33763.1| conserved hypothetical protein [Brucella suis 1330]
gi|161337447|gb|ABX63751.1| hemimethylated DNA binding domain [Brucella canis ATCC 23365]
gi|163675449|gb|ABY39559.1| hemimethylated DNA binding domain [Brucella suis ATCC 23445]
gi|225615565|gb|EEH12614.1| hemimethylated DNA binding domain-containing protein [Brucella ceti
str. Cudo]
gi|255998010|gb|ACU49697.1| hypothetical protein BMI_II568 [Brucella microti CCM 4915]
gi|260154804|gb|EEW89885.1| hemimethylated DNA binding protein [Brucella suis bv. 4 str. 40]
gi|260918994|gb|EEX85647.1| hemimethylated DNA binding protein [Brucella ceti B1/94]
gi|260922279|gb|EEX88847.1| hemimethylated DNA binding protein [Brucella ceti M13/05/1]
gi|261292751|gb|EEX96247.1| hemimethylated DNA binding protein [Brucella ceti M644/93/1]
gi|261297972|gb|EEY01469.1| hemimethylated DNA binding protein [Brucella pinnipedialis B2/94]
gi|261736764|gb|EEY24760.1| hemimethylated DNA binding protein [Brucella sp. F5/99]
gi|261740036|gb|EEY27962.1| hemimethylated DNA binding protein [Brucella suis bv. 5 str. 513]
gi|261743309|gb|EEY31235.1| hemimethylated DNA binding protein [Brucella suis bv. 3 str. 686]
gi|264664050|gb|EEZ34311.1| hemimethylated DNA binding protein [Brucella sp. 83/13]
gi|294819284|gb|EFG36284.1| hemimethylated DNA binding domain-containing protein [Brucella sp.
NVSL 07-0026]
gi|306273798|gb|EFM55636.1| hemimethylated DNA binding protein [Brucella inopinata BO1]
gi|306288183|gb|EFM59570.1| hemimethylated DNA binding protein [Brucella sp. BO2]
gi|306405280|gb|EFM61556.1| hemimethylated DNA binding protein [Brucella sp. NF 2653]
gi|340560817|gb|AEK56054.1| hypothetical protein BPI_II626 [Brucella pinnipedialis B2/94]
gi|343384549|gb|AEM20040.1| hypothetical protein BS1330_II0569 [Brucella suis 1330]
gi|358259978|gb|AEU07711.1| hypothetical protein BSVBI22_B0568 [Brucella suis VBI22]
gi|363405101|gb|AEW15395.1| hemimethylated DNA binding protein [Brucella canis HSK A52141]
Length = 112
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++GQ V H++F +R VI +DP + W + E + QPFY LL
Sbjct: 11 YQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLL 61
>gi|32475126|ref|NP_868120.1| hypothetical protein RB7962 [Rhodopirellula baltica SH 1]
gi|421613772|ref|ZP_16054843.1| UvrB/UvrC protein [Rhodopirellula baltica SH28]
gi|440716892|ref|ZP_20897395.1| UvrB/UvrC protein [Rhodopirellula baltica SWK14]
gi|449138300|ref|ZP_21773570.1| UvrB/UvrC protein [Rhodopirellula europaea 6C]
gi|32445666|emb|CAD75672.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
gi|408495358|gb|EKJ99945.1| UvrB/UvrC protein [Rhodopirellula baltica SH28]
gi|436438085|gb|ELP31661.1| UvrB/UvrC protein [Rhodopirellula baltica SWK14]
gi|448883073|gb|EMB13617.1| UvrB/UvrC protein [Rhodopirellula europaea 6C]
Length = 173
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 100 FFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSII 159
FF+ + R+ C L+ + ++ L+ L + + + KR + + A +A +I
Sbjct: 80 FFEFRNSGRLGCPLDYDHFEA--DLKPLLINIHDSLEHT--GKRPTRAAATADSQA-DLI 134
Query: 160 RLRADLQKAIDSENYALAADLRDQICKLEAES 191
RLR +++ A++ E Y A++LRDQI ++ E
Sbjct: 135 RLRKEMEAAVEREEYERASELRDQINAIQGEP 166
>gi|148558617|ref|YP_001257563.1| hemimethylated DNA-binding region [Brucella ovis ATCC 25840]
gi|148369902|gb|ABQ62774.1| hemimethylated DNA-binding region [Brucella ovis ATCC 25840]
Length = 112
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++GQ V H++F +R VI +DP + W + E + QPFY LL
Sbjct: 11 YQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLL 61
>gi|17989038|ref|NP_541671.1| cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
gi|62317569|ref|YP_223422.1| hypothetical protein BruAb2_0650 [Brucella abortus bv. 1 str.
9-941]
gi|83269550|ref|YP_418841.1| hypothetical protein BAB2_0666 [Brucella melitensis biovar Abortus
2308]
gi|189022823|ref|YP_001932564.1| hypothetical protein BAbS19_II06230 [Brucella abortus S19]
gi|225686359|ref|YP_002734331.1| hemimethylated DNA binding domain-containing protein [Brucella
melitensis ATCC 23457]
gi|237817117|ref|ZP_04596109.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus str. 2308 A]
gi|256262499|ref|ZP_05465031.1| hemimethylated DNA binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|260544806|ref|ZP_05820627.1| hemimethylated DNA binding protein [Brucella abortus NCTC 8038]
gi|260564665|ref|ZP_05835150.1| hemimethylated DNA binding protein [Brucella melitensis bv. 1 str.
16M]
gi|260756663|ref|ZP_05869011.1| hemimethylated DNA binding protein [Brucella abortus bv. 6 str.
870]
gi|260760094|ref|ZP_05872442.1| hemimethylated DNA binding protein [Brucella abortus bv. 4 str.
292]
gi|260763332|ref|ZP_05875664.1| hemimethylated DNA binding protein [Brucella abortus bv. 2 str.
86/8/59]
gi|261216026|ref|ZP_05930307.1| hemimethylated DNA binding protein [Brucella abortus bv. 3 str.
Tulya]
gi|376271209|ref|YP_005114254.1| cytoplasmic protein [Brucella abortus A13334]
gi|384213084|ref|YP_005602167.1| putative cytoplasmic protein [Brucella melitensis M5-90]
gi|384410184|ref|YP_005598804.1| putative cytoplasmic protein [Brucella melitensis M28]
gi|384446711|ref|YP_005660929.1| hemimethylated DNA binding domain-containing protein [Brucella
melitensis NI]
gi|423168537|ref|ZP_17155239.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI435a]
gi|423172030|ref|ZP_17158704.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI474]
gi|423174239|ref|ZP_17160909.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI486]
gi|423176116|ref|ZP_17162782.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI488]
gi|423181459|ref|ZP_17168099.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI010]
gi|423184592|ref|ZP_17171228.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI016]
gi|423187742|ref|ZP_17174355.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI021]
gi|423190163|ref|ZP_17176772.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI259]
gi|17984880|gb|AAL53935.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
gi|62197762|gb|AAX76061.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82939824|emb|CAJ12832.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189021397|gb|ACD74118.1| hypothetical protein BAbS19_II06230 [Brucella abortus S19]
gi|225642464|gb|ACO02377.1| hemimethylated DNA binding domain-containing protein [Brucella
melitensis ATCC 23457]
gi|237787930|gb|EEP62146.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus str. 2308 A]
gi|260098077|gb|EEW81951.1| hemimethylated DNA binding protein [Brucella abortus NCTC 8038]
gi|260152308|gb|EEW87401.1| hemimethylated DNA binding protein [Brucella melitensis bv. 1 str.
16M]
gi|260670412|gb|EEX57352.1| hemimethylated DNA binding protein [Brucella abortus bv. 4 str.
292]
gi|260673753|gb|EEX60574.1| hemimethylated DNA binding protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676771|gb|EEX63592.1| hemimethylated DNA binding protein [Brucella abortus bv. 6 str.
870]
gi|260917633|gb|EEX84494.1| hemimethylated DNA binding protein [Brucella abortus bv. 3 str.
Tulya]
gi|263092236|gb|EEZ16533.1| hemimethylated DNA binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|326410731|gb|ADZ67795.1| putative cytoplasmic protein [Brucella melitensis M28]
gi|326554024|gb|ADZ88663.1| putative cytoplasmic protein [Brucella melitensis M5-90]
gi|349744708|gb|AEQ10250.1| hemimethylated DNA binding domain-containing protein [Brucella
melitensis NI]
gi|363402381|gb|AEW19350.1| putative cytoplasmic protein [Brucella abortus A13334]
gi|374536452|gb|EHR07972.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI474]
gi|374537743|gb|EHR09253.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI435a]
gi|374540240|gb|EHR11742.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI486]
gi|374546049|gb|EHR17509.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI010]
gi|374546892|gb|EHR18351.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI016]
gi|374554718|gb|EHR26128.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI488]
gi|374555546|gb|EHR26955.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI021]
gi|374556203|gb|EHR27608.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI259]
Length = 112
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+++GQ V H++F +R VI +DP + W + E + QPFY LL
Sbjct: 11 YQIGQVVQHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLL 61
>gi|392597697|gb|EIW87019.1| YccV-like-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 627
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +G HK F Y + G D C + W+ V+ L +G QPFY +L
Sbjct: 483 FFVGTVFRHKRFDYIGYVIGWDAKCMATEQWIVQMGVDMLSRGRHQPFYNVL 534
>gi|255587201|ref|XP_002534177.1| conserved hypothetical protein [Ricinus communis]
gi|223525737|gb|EEF28201.1| conserved hypothetical protein [Ricinus communis]
Length = 190
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 18/100 (18%)
Query: 143 RGLSSKSEAQDKALS---II----RLRADLQKAIDSENYALAADLRDQICKLEAESLAAS 195
R KSE ++ LS II L DLQ AI+ ENYA AA +RD + L+ +S A+
Sbjct: 12 RACQVKSEDSEEMLSGESIILDEQALTRDLQIAIEEENYAQAAKIRDSLRLLQEDSKASV 71
Query: 196 ATALAFENARF--AFRLGQKVNHKIFGYRAVICGMDPVCC 233
A NARF AFR N + +A+ D VCC
Sbjct: 72 LAA----NARFYNAFR-----NGDLASMQALWAKGDNVCC 102
>gi|6523048|emb|CAB62316.1| putative protein [Arabidopsis thaliana]
Length = 2152
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR--ADLQKA 168
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ + AD+
Sbjct: 555 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKDSADVVDW 614
Query: 169 IDSE 172
DSE
Sbjct: 615 EDSE 618
>gi|159483425|ref|XP_001699761.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281703|gb|EDP07457.1| predicted protein [Chlamydomonas reinhardtii]
Length = 951
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 14/104 (13%)
Query: 94 EDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQD 153
+D LF FQ A + N+++ AQQ R E+E + LE G S+ EA+
Sbjct: 550 QDCLFIVFQEAKARLAELGTNLQD---AQQGRQ-----EKEAA--LEVLSGRVSQLEARA 599
Query: 154 KALSIIRLR-ADLQK---AIDSENYALAADLRDQICKLEAESLA 193
L +RLR A+L+ ++D+ YA+ A+LRD++ +LEAE+ A
Sbjct: 600 AELEAMRLRVAELEAQGASLDASRYAVTAELRDRVGELEAETEA 643
>gi|240255576|ref|NP_190606.6| uncharacterized protein [Arabidopsis thaliana]
gi|332645138|gb|AEE78659.1| uncharacterized protein [Arabidopsis thaliana]
Length = 2156
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR--ADLQKA 168
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ + AD+
Sbjct: 528 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKDSADVVDW 587
Query: 169 IDSE 172
DSE
Sbjct: 588 EDSE 591
>gi|88811014|ref|ZP_01126270.1| Hemimethylated DNA-binding region [Nitrococcus mobilis Nb-231]
gi|88791553|gb|EAR22664.1| Hemimethylated DNA-binding region [Nitrococcus mobilis Nb-231]
Length = 104
Score = 39.3 bits (90), Expect = 2.7, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
F +GQ V+H +F YR VI +DPV + W E+ + + + +P+Y +L
Sbjct: 7 FTIGQLVHHTLFDYRGVIVDVDPVFQGTEEWYEM--MARSRPPKDKPWYHVL 56
>gi|334139319|ref|ZP_08512711.1| excinuclease ABC, B subunit [Paenibacillus sp. HGF7]
gi|333602132|gb|EGL13563.1| excinuclease ABC, B subunit [Paenibacillus sp. HGF7]
Length = 665
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 109 VQCALNMEE----YDIAQQLRNKL--TEVEEEISRQL-EAKRGLSSKSEAQDKALSIIRL 161
+Q A N+E IA+++R+ + T+V EE + L E K G SK +D+A I RL
Sbjct: 579 IQEAYNIEHGITPQTIAKKIRDVIEATKVAEEKTEYLAEVKTGKMSK---KDRAAVIERL 635
Query: 162 RADLQKAIDSENYALAADLRDQICKLEAE 190
A+++ A S + AA+LRD + +L+AE
Sbjct: 636 EAEMKDAAKSLQFERAAELRDALLELKAE 664
>gi|149915480|ref|ZP_01904007.1| hypothetical protein RAZWK3B_05677 [Roseobacter sp. AzwK-3b]
gi|149810769|gb|EDM70610.1| hypothetical protein RAZWK3B_05677 [Roseobacter sp. AzwK-3b]
Length = 108
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
AR + LGQ V HK +R V+ +DP + W A E + QPFY LL
Sbjct: 4 ARAKYSLGQVVRHKKHPFRGVVFDVDPEFANTEEWYH-AIPEDSRPSRQQPFYHLL 58
>gi|356504325|ref|XP_003520947.1| PREDICTED: uncharacterized protein LOC100815544 [Glycine max]
Length = 252
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 155 ALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARF--AFRLGQ 212
AL L +LQ AI ENYA AA++RD + L+ + S T + N+RF +FR G
Sbjct: 93 ALDEQTLEEELQHAIAEENYAKAAEIRDTLKNLQKD----SKTTVCGANSRFYESFRTGD 148
Query: 213 KVNHKIFGYRAVICGMDPVCC 233
+ +A+ D VCC
Sbjct: 149 -----LAAMQALWAKRDGVCC 164
>gi|340384062|ref|XP_003390534.1| PREDICTED: f-box only protein 21-like [Amphimedon queenslandica]
Length = 105
Score = 38.5 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 214 VNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ H + Y VI G D C + +W+ V++L GP+QPFY +L
Sbjct: 1 MKHIRYDYYCVIYGWDYSCEMTEAWIHQMGVDQLPLGPNQPFYNVL 46
>gi|296417597|ref|XP_002838439.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634378|emb|CAZ82630.1| unnamed protein product [Tuber melanosporum]
Length = 567
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCC--ESSSWMEIAQVEKLQQGPSQPFYQLL 259
+R+G HK + ++ V+ G C E WM+ V+ L +G QPFY L
Sbjct: 460 YRVGTVFVHKRYPFQGVVFGWSRTCAPREGEEWMQTMGVDTLSRGRHQPFYLAL 513
>gi|357137361|ref|XP_003570269.1| PREDICTED: uncharacterized protein LOC100845596 [Brachypodium
distachyon]
Length = 249
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 146 SSKSEAQDKALSII---RLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFE 202
SS +E A+ ++ LR DL+ AI+ E+Y AA LRD++ L + +A A
Sbjct: 73 SSDTENATTAIPVVDEETLRRDLEAAIEDEDYVSAARLRDELRHLREDGRSAVLAA---- 128
Query: 203 NARF--AFRLGQ 212
NARF AFR G
Sbjct: 129 NARFYDAFREGD 140
>gi|218516086|ref|ZP_03512926.1| hypothetical protein Retl8_21653 [Rhizobium etli 8C-3]
Length = 100
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+G+ V HK+F +R VI +DP + W E ++ QPFY LL
Sbjct: 1 IGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLL 49
>gi|443705935|gb|ELU02231.1| hypothetical protein CAPTEDRAFT_213768 [Capitella teleta]
Length = 585
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQLL 259
+ +G + H+ + Y VI G D C S SW+ V L Q QPFY +L
Sbjct: 464 YSVGLVMVHRRYDYSCVIYGWDETCKASESWIIQMGVNNLPQKQFQPFYNVL 515
>gi|357129692|ref|XP_003566495.1| PREDICTED: uncharacterized protein LOC100832438 [Brachypodium
distachyon]
Length = 297
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 25/120 (20%)
Query: 77 GSDRGLDASSERSESANEDILFFFFQLD----LATRVQCALNMEEYDIAQQLRNKLTEVE 132
G D + ++ R E ++ F + L ++ A +E+Y A +LR+ L E
Sbjct: 62 GKDEETEEAAARREEGDKAAAAFLLRSQKYAMLKQQLAVAAQLEDYKEAARLRDSLRSFE 121
Query: 133 EEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESL 192
EE ++RLR L+KA++ E +A AA RD++ L SL
Sbjct: 122 EE---------------------EPVLRLRRSLKKAVEEERFADAAKYRDELMILAPHSL 160
>gi|363581114|ref|ZP_09313924.1| two component regulator three Y domain-containing protein
[Flavobacteriaceae bacterium HQM9]
Length = 202
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 112 ALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDS 171
L E+ D+ QL +K E++IS L + LS + ++ K S I++ DLQK I +
Sbjct: 39 TLETEKLDLVTQLISK----EKDIS--LRTREILSLQMQSVKKLQSKIKIAEDLQKVIKN 92
Query: 172 ----ENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQK 213
+ Y++ AD+R KLE E + +A NA F F+L K
Sbjct: 93 KTKVDTYSILADIRS--SKLEDEKVLVIKQQIAEHNASFIFQLTGK 136
>gi|417304802|ref|ZP_12091807.1| UvrB/UvrC protein [Rhodopirellula baltica WH47]
gi|327538899|gb|EGF25538.1| UvrB/UvrC protein [Rhodopirellula baltica WH47]
Length = 183
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 100 FFQLDLATRVQCALNME--EYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEA---QDK 154
FF+ + R+ C L+ + E D+ L N +E R A S+++ + +
Sbjct: 80 FFEFRNSGRLGCPLDYDHFEADLKPLLINIHDSLEHTGKRPTRAAATADSQADLIRLRKE 139
Query: 155 ALSIIRLRADLQKAIDSENYALAADLRDQICKLEAES 191
+IRLR +++ A++ E Y A++LRDQI ++ E
Sbjct: 140 QADLIRLRKEMEAAVEREEYERASELRDQINAIQGEP 176
>gi|224140331|ref|XP_002323536.1| predicted protein [Populus trichocarpa]
gi|222868166|gb|EEF05297.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 164 DLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARF--AFRLGQKVNHKIFGY 221
+LQ AI+ ENYA AA +RD + L+ +S A+ A NARF AFR G +
Sbjct: 3 ELQVAIEEENYAQAAKIRDGLKVLQEDSKASVLAA----NARFYNAFRKGD-----LAAM 53
Query: 222 RAVICGMDPVCC 233
+++ D VCC
Sbjct: 54 QSLWAKADNVCC 65
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,421,217,497
Number of Sequences: 23463169
Number of extensions: 163770380
Number of successful extensions: 453172
Number of sequences better than 100.0: 454
Number of HSP's better than 100.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 247
Number of HSP's that attempted gapping in prelim test: 452785
Number of HSP's gapped (non-prelim): 569
length of query: 321
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 179
effective length of database: 9,027,425,369
effective search space: 1615909141051
effective search space used: 1615909141051
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 77 (34.3 bits)