BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020762
(321 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/293 (46%), Positives = 190/293 (64%), Gaps = 7/293 (2%)
Query: 1 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 60
MD + VV+G V ET+ LL +++D I YTG++ V +IVMAAAAKHLTPV LELGGKSP
Sbjct: 157 MDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPC 216
Query: 61 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 120
D +L VACRR+ GK+ N+GQ C++PD+I+ FYG++
Sbjct: 217 YVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDA 275
Query: 121 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMS 180
+S+D RI+N HF R+ L+D+ KV+ HGG D++ IAPT+L+DV S +M
Sbjct: 276 KQSRDYGRIINDRHFQRVKGLIDNQKVA----HGGTWDQSSRYIAPTILVDVDPQSPVMQ 331
Query: 181 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 240
EEIFGP++PI+ V +E++ IN KPLA Y+F+NN+K+ ++ + S+GG+ ND
Sbjct: 332 EEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVI 391
Query: 241 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP--VRYPP 291
VH+ V +LPFGGV SGMGAYHGK SF+ FSH+++ L + + + RYPP
Sbjct: 392 VHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPP 444
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 264 bits (674), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 184/286 (64%), Gaps = 7/286 (2%)
Query: 8 VVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 67
V+ G V ET+ LL +++D I YTG++ V +I+M AAAKHLTPV LELGGKSP D +
Sbjct: 181 VINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCD 240
Query: 68 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLS 127
L VACRR+ GK+ N+GQ C++PD+I+ FYG++ +S+D
Sbjct: 241 LDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYG 299
Query: 128 RIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPL 187
RI+++ HF R+ L++ KV+ +GG D IAPT+L DV S +M EEIFGP+
Sbjct: 300 RIISARHFQRVMGLIEGQKVA----YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPV 355
Query: 188 LPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 247
LPI+ V +E++ IN KPLA Y+F++N K+ ++ + S+GG+ ND VH+ +HS
Sbjct: 356 LPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHS 415
Query: 248 LPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPP 291
LPFGGV SGMG+YHGK SF+ FSH+++ L R + D + VRYPP
Sbjct: 416 LPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPP 461
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 148/273 (54%), Gaps = 10/273 (3%)
Query: 6 IRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 65
+ V++G E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK P++
Sbjct: 189 VAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPD 248
Query: 66 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESK 124
+L +++ GK+ N+GQ CI+PD++ Y K L E
Sbjct: 249 ADLDQTVNQLMFGKF-INSGQTCIAPDYL-----YVHYSVKDALLERLVERVKTELPEIN 302
Query: 125 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIF 184
++V RL LL + G+++ G + D +K ++ T++ V + +MSEE+F
Sbjct: 303 STGKLVTERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELF 360
Query: 185 GPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHL 243
GP+LP+L D + + D +N KPLA Y+F + + + + + +G +N +H
Sbjct: 361 GPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHA 420
Query: 244 AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 276
LPFGG+ SGMG YHG FS+ F+HKK+V
Sbjct: 421 FSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 147/273 (53%), Gaps = 10/273 (3%)
Query: 6 IRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 65
+ V++G E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK P++
Sbjct: 189 VAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPD 248
Query: 66 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESK 124
+L +++ GK+ N+GQ I+PD++ Y K L E
Sbjct: 249 ADLDQTVNQLMFGKF-INSGQTXIAPDYL-----YVHYSVKDALLERLVERVKTELPEIN 302
Query: 125 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIF 184
++V RL LL + G+++ G + D +K ++ T++ V + +MSEE+F
Sbjct: 303 STGKLVTERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELF 360
Query: 185 GPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHL 243
GP+LP+L D + + D +N KPLA Y+F + + + + + +G +N +H
Sbjct: 361 GPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHA 420
Query: 244 AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 276
LPFGG+ SGMG YHG FS+ F+HKK+V
Sbjct: 421 FSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 9/258 (3%)
Query: 25 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCN 83
DKI +TG+ +M AAA+ + PV LELGGKSP VVFD NL +A + G + N
Sbjct: 245 DKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFA-N 303
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ C + +I ++ A +PLE L +V++ + ++ K +
Sbjct: 304 TGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFI 363
Query: 143 DDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 198
+ K G I+ GGER K + PT++ DV I EE+FGP+L + T E
Sbjct: 364 SNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQ 423
Query: 199 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 258
+ ++ N L A + + + K ++F + G + IN + LP+GG + SG
Sbjct: 424 AIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGF 481
Query: 259 GAYHGKFSFDVFSHKKAV 276
G GK+ + F + K V
Sbjct: 482 GRDLGKWGLENFLNIKQV 499
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 140/269 (52%), Gaps = 10/269 (3%)
Query: 11 GAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 70
G V ++++K + I +TG+S+V ++ A + LELGG +P + +L
Sbjct: 201 GEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNK 258
Query: 71 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRI 129
A +I G + GQ CIS I+ + A NPL+ K D+ +
Sbjct: 259 AVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPL 317
Query: 130 VNSNHFARLSKLLDDD-KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 188
++ H + K+++ GK++ GG+RDK PT+L +V RD+++ E F P++
Sbjct: 318 ISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK--ALFYPTIL-EVDRDNILCKTETFAPVI 374
Query: 189 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 248
PI+ ++ E+ DI NS L + +FTN+ +F E + GG+VIND+++ ++
Sbjct: 375 PIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSL-FRQDNM 432
Query: 249 PFGGVQESGMGAYHGKFSFDVFSHKKAVL 277
PFGGV++SG+G K++ + S+ K ++
Sbjct: 433 PFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 123/258 (47%), Gaps = 9/258 (3%)
Query: 25 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCN 83
DKI +TG+ +M AAA+ + PV L LGGKSP VVFD NL +A + G + N
Sbjct: 245 DKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFA-N 303
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ C + +I ++ A +PLE L +V++ + ++ K +
Sbjct: 304 TGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFI 363
Query: 143 DDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 198
+ K G I+ GGER K + PT++ DV I EE+FGP+L + T E
Sbjct: 364 SNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQ 423
Query: 199 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 258
+ ++ N L A + + + K ++F + G + IN + LP+GG + SG
Sbjct: 424 AIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGF 481
Query: 259 GAYHGKFSFDVFSHKKAV 276
G GK+ + F + K V
Sbjct: 482 GRDLGKWGLENFLNIKQV 499
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 12/274 (4%)
Query: 25 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
DK+ +TG+S +M AAA+ + PV LELGGKSP+V ++L A I G + N
Sbjct: 232 DKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFW-TN 290
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLD 143
GQ C + +I + A +PLE L +V+ + ++ K +
Sbjct: 291 GQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVS 350
Query: 144 DDKVSG-KIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 199
+ K G I+ GG R K I PT++ DV + I EE+FGP+L + T E++
Sbjct: 351 NAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEA 410
Query: 200 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 259
D+ N L A + +N+ + ++ + AG + +N + P+GGV+ SG G
Sbjct: 411 IDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCS--QPCFTQAPWGGVKRSGFG 468
Query: 260 AYHGKFSFDVFSHKKAVLSRGFIGDVPVRY--PP 291
G++ D + K V +I + P + PP
Sbjct: 469 RELGEWGLDNYLSVKQVTQ--YISEEPWGWYQPP 500
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Query: 25 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
DKI +TG+S VMA+AA+ + PV LELGGKSP+V +++ I G + N
Sbjct: 229 DKIAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFW-TN 287
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLD 143
GQ C + ++ + A +P E L +++ + ++ K +
Sbjct: 288 GQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFIS 347
Query: 144 DDKVSG-KIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 199
K G I++GG R K I PT++ D+ I EE+FGP+L + T +++
Sbjct: 348 TAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEA 407
Query: 200 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 259
+ N LAA +F+N+ + ++ + + G + +N + P+GG++ SG G
Sbjct: 408 IALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVNCS--QPCFVQAPWGGIKRSGFG 465
Query: 260 AYHGKFSFDVFSHKKAV 276
G++ + + K V
Sbjct: 466 RELGEWGIQNYLNIKQV 482
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 12/268 (4%)
Query: 25 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCN 83
DK+ +TG+ + +MA+AA + PV LELGGKSP+V +++ A + G W
Sbjct: 249 DKVAFTGSFETGKKIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFW--T 306
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
NGQ C + ++ A +PLE L +V+ + ++ K +
Sbjct: 307 NGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFI 366
Query: 143 DDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 198
+ K G I+ GG R + I PT++ D+ I EE+FGP+L + ++
Sbjct: 367 SNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDE 426
Query: 199 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 258
+ ++ N LA + + +++ Q+ E + AG + +N P+GG + SG
Sbjct: 427 AIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVN--CSQPCFCQAPWGGNKRSGF 484
Query: 259 GAYHGKFSFDVFSHKKAVLSRGFIGDVP 286
G G+ D + K V +I D P
Sbjct: 485 GRELGEGGIDNYLSVKQVTE--YISDEP 510
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 16/276 (5%)
Query: 25 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-- 82
DKI +TG+S +M AA+ + PV LELGGKSP+V ++L + GC
Sbjct: 232 DKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVF---GCFF 288
Query: 83 NNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKL 141
NGQ C + +I + A +PLE L IV+ + ++
Sbjct: 289 TNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNC 348
Query: 142 LDDDKVSGKIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 197
+ K G + G R L+ + PT++ DV I EE+FGP+L + T E
Sbjct: 349 ISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEE 408
Query: 198 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 257
++ ++ N L + + +N+ + ++ + + AG + IN + P+GG++ SG
Sbjct: 409 EAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWIN--CAQPSFIQAPWGGIKRSG 466
Query: 258 MGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRY--PP 291
G G++ + + K V + D P + PP
Sbjct: 467 FGRELGEWGLENYLSVKQVTR--YTSDEPWGWYQPP 500
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 17/291 (5%)
Query: 6 IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 63
+ VV+G AET +LL + K+ +TG+ + VM +AK + V LELGGKSP++
Sbjct: 215 VNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIF 273
Query: 64 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLES 123
L+ A R +M + GQ C + + ++ P +PL +
Sbjct: 274 KDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332
Query: 124 KD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE-------RDKNKLRIAPTLLLDVPR 174
+ + +++ ++ + K G +++ GGE + KN ++P +L +
Sbjct: 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRD 392
Query: 175 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 234
D + EEIFGP++ +L D E+ N+ T LA+ +FT + + + AG
Sbjct: 393 DMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTC 452
Query: 235 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 285
IN ++ +PFGG + SG G +G+ + D +S K V+ +GDV
Sbjct: 453 YINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE--MGDV 499
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 7/254 (2%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 86
+ TG+ +MA AAK++T V LELGGK+P + +L++A + ++ + N+GQ
Sbjct: 225 VSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQ 283
Query: 87 ACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARL-SKLLD 143
C + + K NP E D++ ++N+ R+ K+
Sbjct: 284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343
Query: 144 DDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 202
+ ++ GG+ + K PTLLLDV ++ IM EE FGP+LP++ D +ED+ +
Sbjct: 344 AVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISM 403
Query: 203 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH 262
N L + ++T N + + ++ + G IN A+ G ++SG+G
Sbjct: 404 ANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGAD 461
Query: 263 GKFSFDVFSHKKAV 276
GK + + V
Sbjct: 462 GKHGLHEYLQTQVV 475
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 7/254 (2%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 86
+ TG+ +MA AAK++T V LELGGK+P + +L++A + ++ + N+GQ
Sbjct: 225 VSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQ 283
Query: 87 ACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARL-SKLLD 143
C + + K NP E D++ ++N+ R+ K+
Sbjct: 284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343
Query: 144 DDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 202
+ ++ GG+ + K PTLLLDV ++ IM EE FGP+LP++ D +ED+ +
Sbjct: 344 AVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISM 403
Query: 203 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH 262
N L + ++T N + + ++ + G IN A+ G ++SG+G
Sbjct: 404 ANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGAD 461
Query: 263 GKFSFDVFSHKKAV 276
GK + + V
Sbjct: 462 GKHGLHEYLQTQVV 475
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 7/256 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A + + N
Sbjct: 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FN 297
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ C + +D NP +SK + V+ F ++ +
Sbjct: 298 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGQ 475
Query: 261 YHGKFSFDVFSHKKAV 276
G++ ++ K V
Sbjct: 476 ELGEYGLQAYTEVKTV 491
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 7/256 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A + + N
Sbjct: 233 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FN 291
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ C + +D NP +SK + V+ F ++ +
Sbjct: 292 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 351
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 352 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 411
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 412 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGR 469
Query: 261 YHGKFSFDVFSHKKAV 276
G++ ++ K V
Sbjct: 470 ELGEYGLQAYTEVKTV 485
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 7/256 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A + + N
Sbjct: 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FN 297
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ C + +D NP +SK + V+ F ++ +
Sbjct: 298 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGR 475
Query: 261 YHGKFSFDVFSHKKAV 276
G++ ++ K V
Sbjct: 476 ELGEYGLQAYTEVKTV 491
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 119/278 (42%), Gaps = 10/278 (3%)
Query: 6 IRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 64
+ VV G + AL + D +TG+S V R V AA+ L P LELGGKS +
Sbjct: 206 LSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILE 265
Query: 65 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLES 123
++L A M+ N GQ C++ I+ + Y G +
Sbjct: 266 DVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324
Query: 124 KDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK---NKLRIAPTLLLDVPRDSLIM 179
+ +++ R+ + G ++V GG R + N I PT+ DV I
Sbjct: 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIA 384
Query: 180 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 239
EEIFGP+L I+ D ED+ I N LA ++T + + + + G IN
Sbjct: 385 QEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWY 444
Query: 240 AVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 277
A PFGG + SG+G +G + F+ +K+VL
Sbjct: 445 AFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 7/254 (2%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 86
+ TG+ +MA AAK++T V LELGGK+P + +L++A + ++ + N+GQ
Sbjct: 225 VSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQ 283
Query: 87 ACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLSKLLDD 144
C + + K NP E D++ ++N+ R+ + +
Sbjct: 284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343
Query: 145 DKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 202
G ++ GG+ + K PTLLLDV ++ IM EE FGP+LP++ D +E++ +
Sbjct: 344 AVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISM 403
Query: 203 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH 262
N L + ++T N + + ++ + G IN A+ G ++SG+G
Sbjct: 404 ANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGF-HAGWRKSGIGGAD 461
Query: 263 GKFSFDVFSHKKAV 276
GK + + V
Sbjct: 462 GKHGLHEYLQTQVV 475
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ + R++ +AA + +L V L+LGGKSP + S ++ A + + N
Sbjct: 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALF-FN 297
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ+C + +D NP +SK + V+ F ++ +
Sbjct: 298 QGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGR 475
Query: 261 YHGKFSFDVFSHKKAV 276
G++ ++ K V
Sbjct: 476 ELGEYGLQAYTEVKTV 491
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 7/256 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ + G++ + R++ +AA + +L V LELGGKSP + S ++ A + + N
Sbjct: 239 DKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FN 297
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ C + +D NP +SK + V+ F ++ +
Sbjct: 298 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGR 475
Query: 261 YHGKFSFDVFSHKKAV 276
G++ ++ K V
Sbjct: 476 ELGEYGLQAYTEVKTV 491
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 14/259 (5%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 86
I TG++ + + +A+++TPV+LELGGK+P+V +L A + G++ N GQ
Sbjct: 231 ITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFA-NCGQ 289
Query: 87 ACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLES-KDLSRIVNSNHFARLSKLLDDD 145
C + + +P+++ + N + ++ +
Sbjct: 290 VCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEA 349
Query: 146 KVSGKIVHGG------ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 199
G V G E + PT+L+DV +D++++ EE FGP+LPI+ V +E +
Sbjct: 350 IKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQA 409
Query: 200 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND--TAVHLAVHSLPFGGVQESG 257
+ N L+AY+ T + Q + + G + IN H H+ G ++SG
Sbjct: 410 IEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHN----GWKQSG 465
Query: 258 MGAYHGKFSFDVFSHKKAV 276
G GKF + + KK V
Sbjct: 466 FGGEDGKFGLEQYLEKKTV 484
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A + + N
Sbjct: 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FN 297
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ C + +D NP +SK + V+ F ++ +
Sbjct: 298 QGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGR 475
Query: 261 YHGKFSFDVF 270
G++ +
Sbjct: 476 ELGEYGLQAY 485
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 121/260 (46%), Gaps = 7/260 (2%)
Query: 21 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 80
D D + +TG+ RV + AA+ + V LELGGK P + + +L A + G +
Sbjct: 238 DPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY 297
Query: 81 GCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLS 139
N GQ CIS ++ + +PL E + ++ H ++
Sbjct: 298 -HNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVH 356
Query: 140 KLLDDDKVSG-KIVHGGER--DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 196
+ SG +++ GGER + L APT+ V D I EEIFGP+L LT
Sbjct: 357 SYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTA 416
Query: 197 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 256
+++ + N+ L+A +++ N + Q + + AG IN +V LP GG ++S
Sbjct: 417 DEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWIN--SVIDGTPELPIGGYKKS 474
Query: 257 GMGAYHGKFSFDVFSHKKAV 276
G+G G++ FD +S K V
Sbjct: 475 GLGRELGRYGFDEYSQFKGV 494
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 7/256 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A + + N
Sbjct: 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FN 297
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ + +D NP +SK + V+ F ++ +
Sbjct: 298 QGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGR 475
Query: 261 YHGKFSFDVFSHKKAV 276
G++ ++ K V
Sbjct: 476 ELGEYGLQAYTEVKTV 491
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 7/256 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A + + N
Sbjct: 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FN 297
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ + +D NP +SK + V+ F ++ +
Sbjct: 298 QGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGR 475
Query: 261 YHGKFSFDVFSHKKAV 276
G++ ++ K V
Sbjct: 476 ELGEYGLQAYTEVKTV 491
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 10/255 (3%)
Query: 28 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 87
+TG+ + AAK V LELGGKSP + +++K A + GK N GQ
Sbjct: 223 SFTGSGPTGSKIXEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAK-ATTGKVVNNTGQV 281
Query: 88 CISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLES-KDLSRIVNSNHFARLSKLLDDDK 146
C + ++ NP E + I++ F ++ ++
Sbjct: 282 CTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGI 341
Query: 147 VSG-KIVHGGERDKNKLRIA----PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 201
G ++ +GG L PT+ ++V I EEIFGP+ ++T + ++++
Sbjct: 342 EEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQ 401
Query: 202 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 261
I N LA Y+ +K+ + ++ AG + IN+ LPFGG ++SG+G
Sbjct: 402 IANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRK---PDLPFGGYKQSGLGRE 458
Query: 262 HGKFSFDVFSHKKAV 276
G + + F K++
Sbjct: 459 WGDYGIEEFLEVKSI 473
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 9/261 (3%)
Query: 26 KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNN 84
KI +TG++ +I++ AA + V +ELGG +P +VFDS N+ A + K+ N
Sbjct: 231 KISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NT 288
Query: 85 GQACISPDHIITTKDY--APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLL 142
GQ C+ + + + A G E ++N ++ K +
Sbjct: 289 GQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQV 348
Query: 143 DDDKVSG-KIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+D G +V GG+R + K PTLL +V +D L EE FGPL P++ D E++
Sbjct: 349 NDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAI 408
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
I N+ LA Y ++ + + E + G + +N+ + PFGGV++SG+G
Sbjct: 409 AIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGR 466
Query: 261 YHGKFSFDVFSHKKAVLSRGF 281
K+ D + K V G
Sbjct: 467 EGSKYGIDEYLELKYVCYGGL 487
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 113/276 (40%), Gaps = 11/276 (3%)
Query: 9 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 68
VEG ET A L D +C+TG+ R V AA+ P LELGGK P + NL
Sbjct: 189 VEGG-GETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANL 247
Query: 69 KVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKD 125
++A ++ WG N GQ+C+S + I + PL E
Sbjct: 248 ELATSAIL---WGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGA 304
Query: 126 LSRIVNSNHFARLSKLLDDDKVSGKIVHGG---ERDKNKLRIAPTLLLDVPRDSLIMSEE 182
+ I+ ++ + D G ++H G E PT+ +V + +EE
Sbjct: 305 IGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNHSXKVXTEE 364
Query: 183 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 242
FGP+ P+ +E++ + N L+A +F ++ + ++AG + IND A+
Sbjct: 365 TFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALT 424
Query: 243 LAVHSLPFGGVQESGMGAYH-GKFSFDVFSHKKAVL 277
H SG+G G F K+A L
Sbjct: 425 AXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFL 460
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 9/260 (3%)
Query: 25 DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ V ++ AA K +L V LE+GGKSP + S ++ A + + N
Sbjct: 238 DKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALF-FN 296
Query: 84 NGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKL 141
GQ C + +D YA G NP +S+ + V+ F ++
Sbjct: 297 QGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG-NPFDSRTEQGPQVDETQFKKVLGY 355
Query: 142 LDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 199
+ K G K++ GG ++ I PT+ D+ I EEIFGP++ IL +E+
Sbjct: 356 IKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEV 415
Query: 200 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 259
N+ LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 416 VGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKLSGSG 473
Query: 260 AYHGKFSFDVFSHKKAVLSR 279
G++ ++ K V R
Sbjct: 474 RELGEYGLQAYTEVKTVTVR 493
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 9/257 (3%)
Query: 26 KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNG 85
K+ TG+ R V AAAA HL V +ELGGKSP++ +++ A ++G + ++G
Sbjct: 231 KVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSG 289
Query: 86 QACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 144
Q C + + K +PL+ + L +V+ ++ ++
Sbjct: 290 QVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEK 349
Query: 145 DKVSG-KIVHGGERDKN----KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 199
K G ++ GG N + PT+ DV D I EEIFGP++ +L D ++
Sbjct: 350 GKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEV 409
Query: 200 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 259
N+ LA +FT + + V+ + AG L IN +L +PFGG ++SG G
Sbjct: 410 LARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWIN--TYNLCPVEIPFGGSKQSGFG 467
Query: 260 AYHGKFSFDVFSHKKAV 276
+ + + +S K V
Sbjct: 468 RENSAAALEHYSELKTV 484
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 20/283 (7%)
Query: 6 IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 63
+++V G E A L + K+ +TG++ V R++MA A + + LELGG +P +
Sbjct: 228 LQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVF 287
Query: 64 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLE 122
+L A ++ K+ N GQ C+ + I + Y G
Sbjct: 288 DDADLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEP 346
Query: 123 SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 181
+ ++ ++ ++D G K++ GG ++ L P +L V D L+ E
Sbjct: 347 GVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGG-KELGGLFFEPGILTGVTSDMLVAKE 405
Query: 182 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG------GLV 235
E FGPL P+ D E+ N LAAY +T N + E + G GL+
Sbjct: 406 ETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI 465
Query: 236 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 278
N+ A PFGGV++SG+G K+ + + K + S
Sbjct: 466 SNEVA--------PFGGVKQSGLGREGSKYGIEEYLETKYICS 500
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 9/257 (3%)
Query: 25 DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ V +++ AA K +L V LELGGKSP + + +L A G + +
Sbjct: 240 DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YH 298
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSR--IVNSNHFARLSKL 141
GQ CI+ + + + NPL + +S+ ++ + ++ L
Sbjct: 299 QGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPL-TPGVSQGPQIDKEQYEKILDL 357
Query: 142 LDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 199
++ K G K+ GG NK I PT+ DV D I EEIFGP+ I+ ++D
Sbjct: 358 IESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDV 417
Query: 200 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 259
N+ L+A +FTN+ + +G + +N +V A PFGG + SG G
Sbjct: 418 IKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSA--QCPFGGFKMSGNG 475
Query: 260 AYHGKFSFDVFSHKKAV 276
G++ F ++ K V
Sbjct: 476 RELGEYGFHEYTEVKTV 492
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 7/250 (2%)
Query: 25 DKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A + + N
Sbjct: 239 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FN 297
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ + +D NP +SK + V+ F ++ +
Sbjct: 298 QGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 357
Query: 143 DDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G + GG I PT+ DV I EEIFGP++ IL IE+
Sbjct: 358 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
N+ T LAA +FT + + + AG + +N V A PFGG + SG G
Sbjct: 418 GRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMSGSGR 475
Query: 261 YHGKFSFDVF 270
G++ +
Sbjct: 476 ELGEYGLQAY 485
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 22 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 81
Q + I +TG++ + + A + P++LELGGK + +L++ + +I G +G
Sbjct: 221 QAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFG 278
Query: 82 CNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKL 141
+ GQ C + ++ + A NP + D++ ++++ + L
Sbjct: 279 YS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL 337
Query: 142 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 201
++D G + + L I P L V D + EE FGP+LPI+ V +E++ +
Sbjct: 338 INDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396
Query: 202 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 261
I N L A +FTN+ E + G + IN+ + PF G ++SG G
Sbjct: 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQ 455
Query: 262 HGKFSFDVFSHKKAVL 277
K+S + + K+V+
Sbjct: 456 GVKYSIEAMTTVKSVV 471
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 6 IRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGK 57
I V G+ AE L+D K I +TG+ V + AA HL V++E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 58 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 117
VV D +L +A +++ +G + GQ C + + KD
Sbjct: 292 DTVVVDRDADLDLAAESILVSAFGFS-GQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350
Query: 118 KNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 175
+P + + +++ F ++ ++ K G+++ GGE D + I PT++ D+ +
Sbjct: 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPE 410
Query: 176 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 235
++IM EEIFGP++ + + + +I N+ L + T N+ +Q G L
Sbjct: 411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY 470
Query: 236 INDTAVHLAVHSLPFGGVQESGMGAYHG 263
N V PFGG + SG + G
Sbjct: 471 FNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 22 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 81
Q + I ++G++ + + A + P++LELGGK + +L++ + +I G +G
Sbjct: 221 QAVNFINFSGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFG 278
Query: 82 CNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKL 141
+ GQ C + ++ + A NP + D++ ++++ + L
Sbjct: 279 YS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL 337
Query: 142 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 201
++D G + + L I P L V D + EE FGP+LPI+ V +E++ +
Sbjct: 338 INDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396
Query: 202 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 261
I N L A +FTN+ E + G + IN+ + PF G ++SG G
Sbjct: 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQ 455
Query: 262 HGKFSFDVFSHKKAVL 277
K+S + + K+V+
Sbjct: 456 GVKYSIEAMTTVKSVV 471
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 8/249 (3%)
Query: 26 KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNN 84
K+ +TG++ V R++MA +A + + LELGG +P +VFD +L A I K+ NN
Sbjct: 230 KLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDA-DLDAAVEGAIASKY-RNN 287
Query: 85 GQACISPDH-IITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLD 143
GQ C+ + + + Y G+ L ++N ++ +
Sbjct: 288 GQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIA 347
Query: 144 DDKVSG-KIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 201
D G ++ GG+R PT+L V D + EE FGPL P+ E+
Sbjct: 348 DALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407
Query: 202 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 261
+ N LAAYL++ + + E + G + IN + V PFGGV++SG+G
Sbjct: 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVA--PFGGVKQSGLGRE 465
Query: 262 HGKFSFDVF 270
+ D +
Sbjct: 466 GSHYGIDDY 474
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 9/261 (3%)
Query: 26 KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNN 84
KI +TG++ +I++ AA + V +ELGG +P +VFDS N+ A + K+ N
Sbjct: 231 KISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NT 288
Query: 85 GQACISPDHIITTKDY--APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLL 142
GQ + + + + A G E ++N ++ K +
Sbjct: 289 GQTAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQV 348
Query: 143 DDDKVSG-KIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+D G +V GG+R + K PTLL +V +D L EE FGPL P++ D E++
Sbjct: 349 NDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAI 408
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
I N+ LA Y ++ + + E + G + +N+ + PFGGV++SG+G
Sbjct: 409 AIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGR 466
Query: 261 YHGKFSFDVFSHKKAVLSRGF 281
K+ D + K V G
Sbjct: 467 EGSKYGIDEYLELKYVCYGGL 487
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 22 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 81
Q + I +TG++ + + A + P++L LGGK + +L++ + +I G +G
Sbjct: 221 QAVNFINFTGSTGIGERIGKMAG--MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFG 278
Query: 82 CNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKL 141
+ GQ C + ++ + A NP + D++ ++++ + L
Sbjct: 279 YS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL 337
Query: 142 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 201
++D G + + L I P L V D + EE FGP+LPI+ V +E++ +
Sbjct: 338 INDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396
Query: 202 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 261
I N L A +FTN+ E + G + IN+ + PF G ++SG G
Sbjct: 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQ 455
Query: 262 HGKFSFDVFSHKKAVL 277
K+S + + K+V+
Sbjct: 456 GVKYSIEAMTTVKSVV 471
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 9/257 (3%)
Query: 25 DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DKI +TG++ V +++ AA + +L V LELGGKSP + + +L A + G + N
Sbjct: 238 DKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVF-FN 296
Query: 84 NGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLL 142
GQ C + I + Y G + + ++ + ++ +L+
Sbjct: 297 QGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELI 356
Query: 143 DDDKVSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
G + G + + I PT+ +V D I EEIFGP+ IL +++
Sbjct: 357 QSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVI 416
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL-PFGGVQESGMG 259
+ N+ L A +FTN+ + AG + IN + A+++ PFGG + SG G
Sbjct: 417 ERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWIN---CYNALNAQSPFGGFKMSGNG 473
Query: 260 AYHGKFSFDVFSHKKAV 276
G+F +S K V
Sbjct: 474 REMGEFGLREYSEVKTV 490
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 13/263 (4%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTP-------VLLELGGKSPVVFDSGINLKVACRRMIMGK 79
I +TG+ V + AA + L P +E GGK+ ++ D + +A +++
Sbjct: 256 INFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSA 314
Query: 80 WGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARL 138
+G GQ C + +I T+ Y P G E+ DL +V++ ++
Sbjct: 315 YGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAE-ENPDLGPVVSAEQERKV 372
Query: 139 SKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 197
++ K G++V GG+R + IAPT+ +VP + I EEIFGP+L ++ V
Sbjct: 373 LSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFA 432
Query: 198 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 257
++ ++ N L +++ ++ + G L N V PFGG + SG
Sbjct: 433 EALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSG 492
Query: 258 MGAYHGKFSF-DVFSHKKAVLSR 279
A G + +F KAV R
Sbjct: 493 TNAKTGALDYLRLFLEMKAVAER 515
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 13/263 (4%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTP-------VLLELGGKSPVVFDSGINLKVACRRMIMGK 79
I +TG+ V + AA + L P +E GGK ++ D + +A +++
Sbjct: 256 INFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSA 314
Query: 80 WGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARL 138
+G GQ C + +I T+ Y P G E+ DL +V++ ++
Sbjct: 315 YGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAE-ENPDLGPVVSAEQERKV 372
Query: 139 SKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 197
++ K G++V GG+R + IAPT+ +VP + I EEIFGP+L ++ V
Sbjct: 373 LSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFA 432
Query: 198 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 257
++ ++ N L +++ ++ + G L N V PFGG + SG
Sbjct: 433 EALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSG 492
Query: 258 MGAYHGKFSF-DVFSHKKAVLSR 279
A G + +F KAV R
Sbjct: 493 TNAKTGALDYLRLFLEMKAVAER 515
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 22 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 81
Q + I +TG++ + + A + P++LELGGK + +L++ + +I G +G
Sbjct: 221 QAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFG 278
Query: 82 CNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKL 141
+ GQ + ++ + A NP + D++ ++++ + L
Sbjct: 279 YS-GQRSTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGL 337
Query: 142 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 201
++D G + + L I P L V D + EE FGP+LPI+ V +E++ +
Sbjct: 338 INDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIE 396
Query: 202 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 261
I N L A +FTN+ E + G + IN+ + PF G ++SG G
Sbjct: 397 ISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQRGTDNFPFLGAKKSGAGIQ 455
Query: 262 HGKFSFDVFSHKKAVL 277
K+S + + K+V+
Sbjct: 456 GVKYSIEAMTTVKSVV 471
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 27 ICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 80
I +TG+ V + AAK HL V+ E+GGK VV D ++++A + + +
Sbjct: 255 ITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAF 314
Query: 81 GCNNGQACISPDH-IITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLS 139
G GQ C + ++ K Y G+ + +++ F ++
Sbjct: 315 GFA-GQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIM 373
Query: 140 KLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 198
++ K G++V GG+ D +K I PT+ D+ + +M EEIFGP++ V ++
Sbjct: 374 DYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDE 433
Query: 199 SFDIINSGTKPLAAYLFTNNK----KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 254
+ ++ N+ L + T N+ + KQ+F G L N V PFGG +
Sbjct: 434 ALEVANNTEYGLTGAVITKNRDHINRAKQEF----HVGNLYFNRNCTGAIVGYHPFGGFK 489
Query: 255 ESGMGAYHG 263
SG + G
Sbjct: 490 MSGTDSKAG 498
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 134/284 (47%), Gaps = 14/284 (4%)
Query: 5 SIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 61
+I ++ GA +E ++ ++ D + +TG + +M AA ++T + LELGGK+P ++
Sbjct: 229 TINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNII 288
Query: 62 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 121
FD + ++A + + G + + GQ C + I+ N
Sbjct: 289 FDDA-DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGF 346
Query: 122 ESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPTLLLDVPR 174
++ ++ ++++ H ++ +D K G I GG+R D++ L+ PT++ +
Sbjct: 347 DADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDT 406
Query: 175 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 234
I+ EE+FGP++ + + +++ + N LA +F+ + Q+ + G +
Sbjct: 407 SMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTV 466
Query: 235 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 278
IND H P+GG ++SG+G GK + + K +L+
Sbjct: 467 WIND--FHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILT 508
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 11/262 (4%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTP-------VLLELGGKSPVVFDSGINLKVACRRMIMGK 79
I +TG+ V + AA + L P +E GGK ++ D + +A +++
Sbjct: 256 INFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSA 314
Query: 80 WGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLS 139
+G + + I+T Y P G E+ DL +V++ ++
Sbjct: 315 YGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSVGPAE-ENPDLGPVVSAEQERKVL 373
Query: 140 KLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 198
++ K G++V GG+R + IAPT+ +VP + I EEIFGP+L ++ V +
Sbjct: 374 SYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAE 433
Query: 199 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 258
+ ++ N L +++ ++ + G L N V PFGG + SG
Sbjct: 434 ALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGT 493
Query: 259 GAYHGKFSF-DVFSHKKAVLSR 279
A G + +F KAV R
Sbjct: 494 NAKTGALDYLRLFLEMKAVAER 515
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 17/262 (6%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 86
+ TG + +IVM AA HL + ELGGKSP + + +L+ A ++ + NG+
Sbjct: 245 LTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSF-NGE 303
Query: 87 ACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDD 145
C + ++ + +PL+ + ++ +++ H R+ ++
Sbjct: 304 RCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAG 363
Query: 146 KVSG-KIVHGGERDKNKLR---------IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 195
K G +++ GGER K R + PT+ + I EEIFGP+L +
Sbjct: 364 KREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD 422
Query: 196 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV-HLAVHSLPFGGVQ 254
E++ N LAAY+FT + + + + AG + +N V HL PFGGV+
Sbjct: 423 EEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPT---PFGGVK 479
Query: 255 ESGMGAYHGKFSFDVFSHKKAV 276
SG G ++ D ++ K +
Sbjct: 480 GSGDRREGGTYALDFYTDLKTI 501
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 18/254 (7%)
Query: 26 KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNN 84
K+ +TG++ + R +M AK + V LELGG +P +VFD +L A + K+ N
Sbjct: 227 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NA 284
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLD 143
GQ C+ + + + + L++ + +++ A++ + +
Sbjct: 285 GQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIA 344
Query: 144 DDKVSG-KIVHGG---ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 199
D G ++V GG ER N + PT+L+DVP ++ + EE FGPL P+ + +D
Sbjct: 345 DALEKGARVVCGGKAHERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDE 399
Query: 200 FDII---NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 256
D+I N LAAY + + + E + G + IN + V PFGG++ S
Sbjct: 400 ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKAS 457
Query: 257 GMGAYHGKFSFDVF 270
G+G K+ + +
Sbjct: 458 GLGREGSKYGIEDY 471
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 18/254 (7%)
Query: 26 KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNN 84
K+ +TG++ + R +M AK + V LELGG +P +VFD +L A + K+ N
Sbjct: 227 KLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NA 284
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLD 143
GQ C+ + + + + L++ + +++ A++ + +
Sbjct: 285 GQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIA 344
Query: 144 DDKVSG-KIVHGG---ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 199
D G ++V GG ER N + PT+L+DVP ++ + EE FGPL P+ + +D
Sbjct: 345 DALEKGARVVCGGKAHERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDE 399
Query: 200 FDII---NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 256
D+I N LAAY + + + E + G + IN + V PFGG++ S
Sbjct: 400 ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKAS 457
Query: 257 GMGAYHGKFSFDVF 270
G+G K+ + +
Sbjct: 458 GLGREGSKYGIEDY 471
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 11/260 (4%)
Query: 25 DKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
+KI +TG + + VMA+A+ L V +ELGGKSP++ +L A +M + +
Sbjct: 222 EKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FS 280
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLL 142
+GQ C + + + +P E+ + +V+ H + +
Sbjct: 281 SGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYI 340
Query: 143 DDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 196
+ K +++ GGER + +APT+ D D I+ EEIFGP++ IL D
Sbjct: 341 ESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 400
Query: 197 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 256
+++ N LAA + T + + + + AG IN A +P GG ++S
Sbjct: 401 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQS 458
Query: 257 GMGAYHGKFSFDVFSHKKAV 276
G+G +G + ++ K+V
Sbjct: 459 GVGRENGLTTLAHYTRIKSV 478
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 11/260 (4%)
Query: 25 DKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
+KI +TG + + VMA+A+ L V +ELGGKSP++ +L A +M + +
Sbjct: 223 EKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FS 281
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLL 142
+GQ C + + + +P E+ + +V+ H + +
Sbjct: 282 SGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYI 341
Query: 143 DDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 196
+ K +++ GGER + +APT+ D D I+ EEIFGP++ IL D
Sbjct: 342 ESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401
Query: 197 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 256
+++ N LAA + T + + + + AG IN A +P GG ++S
Sbjct: 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQS 459
Query: 257 GMGAYHGKFSFDVFSHKKAV 276
G+G +G + ++ K+V
Sbjct: 460 GVGRENGLTTLAHYTRIKSV 479
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 47 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXX 106
+ PV+LELGGK P + +LK+ +++ G + + GQ C + + A
Sbjct: 253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYS-GQRCTAIKRVFVQDSVADQLVA 311
Query: 107 XXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 166
+P + D++ +++ A + L+DD +G + G + + L ++P
Sbjct: 312 NIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL-LSP 370
Query: 167 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 226
TLL DV + EE FGP+LPI+ V ++ + N L A +FT +
Sbjct: 371 TLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIG 430
Query: 227 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 259
+ + G + IN H PF GV++SG+G
Sbjct: 431 KHLEVGTVHINAKTERGPDH-FPFLGVKKSGLG 462
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 25 DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
DK+ +TG++ V +++ AAAK +L V LELG K+P + + +L A G + N
Sbjct: 240 DKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVF-TN 298
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLL 142
GQ+CI+ + + + NPL + +N ++ +L+
Sbjct: 299 QGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELI 358
Query: 143 DDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 200
+ K G K+ GG NK I PT+ +V D I EEIFGP+ I+ +++
Sbjct: 359 ESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVI 418
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL-PFGGVQESGMG 259
N+ L A +FT + + AG + +N +LA + P GG + SG G
Sbjct: 419 KRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVN---CYLAASAQSPAGGFKMSGHG 475
Query: 260 AYHGKFSFDVFSHKKAV 276
G++ ++ K V
Sbjct: 476 REMGEYGIHEYTEVKTV 492
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 11/260 (4%)
Query: 25 DKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
+KI +TG + + VMA+A+ L V + LGGKSP++ +L A +M + +
Sbjct: 222 EKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANF-FS 280
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLL 142
+GQ C + + + +P E+ + +V+ H + +
Sbjct: 281 SGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYI 340
Query: 143 DDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 196
+ K +++ GGER + +APT+ D D I+ EEIFGP++ IL D
Sbjct: 341 ESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 400
Query: 197 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 256
+++ N LAA + T + + + + AG IN A +P GG ++S
Sbjct: 401 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQS 458
Query: 257 GMGAYHGKFSFDVFSHKKAV 276
G+G +G + ++ K+V
Sbjct: 459 GVGRENGLTTLAHYTRIKSV 478
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 11/260 (4%)
Query: 25 DKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
+KI +TG + + VMA+A+ L V +ELGGKSP++ +L A +M + +
Sbjct: 223 EKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FS 281
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLL 142
+GQ + + + +P E+ + +V+ H + +
Sbjct: 282 SGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYI 341
Query: 143 DDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 196
+ K +++ GGER + +APT+ D D I+ EEIFGP++ IL D
Sbjct: 342 ESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401
Query: 197 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 256
+++ N LAA + T + + + + AG IN A +P GG ++S
Sbjct: 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQS 459
Query: 257 GMGAYHGKFSFDVFSHKKAV 276
G+G +G + ++ K+V
Sbjct: 460 GVGRENGLTTLAHYTRIKSV 479
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 11/260 (4%)
Query: 25 DKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
+KI +TG + + VMA+A+ L V +ELGGKSP++ +L A +M + +
Sbjct: 223 EKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FS 281
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLL 142
+GQ + + + +P E+ + +V+ H + +
Sbjct: 282 SGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYI 341
Query: 143 DDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 196
+ K +++ GGER + +APT+ D D I+ EEIFGP++ IL D
Sbjct: 342 ESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401
Query: 197 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 256
+++ N LAA + T + + + + AG IN A +P GG ++S
Sbjct: 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPA--EMPVGGYKQS 459
Query: 257 GMGAYHGKFSFDVFSHKKAV 276
G+G +G + ++ K+V
Sbjct: 460 GVGRENGLTTLAHYTRIKSV 479
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 6/259 (2%)
Query: 21 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 80
D + + TG+ R + A A L +LELGG P + + +L++A + + G++
Sbjct: 202 DPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRY 261
Query: 81 GCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLS 139
N GQ C + I + A +PL E DL + L
Sbjct: 262 Q-NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARFDLRDELH 320
Query: 140 KLLDDDKVSG-KIVHGGERDKNKLRI-APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 197
+ + G +++ GGE+ + A T+L DV D +E+FGP+ I
Sbjct: 321 QQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAA 380
Query: 198 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 257
+ + N L+A +FT + L + + GG+ IN + A + FGGV++SG
Sbjct: 381 HALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYSASDA--RVAFGGVKKSG 438
Query: 258 MGAYHGKFSFDVFSHKKAV 276
G F F + + V
Sbjct: 439 FGRELSHFGLHEFCNVQTV 457
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 86
I +TG++ V R + A + + LELGG +P S ++ A I GK+ + GQ
Sbjct: 227 ISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQ 285
Query: 87 ACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDD 145
C+ + II +D Y YG + ++N + ++++
Sbjct: 286 ICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQA 345
Query: 146 KVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIIN 204
K G ++ G+R N L P + + +S I E+F P+ I+ +++ D+ N
Sbjct: 346 KTDGIELAVEGKRVGNVL--TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMAN 403
Query: 205 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGK 264
L++ +FT++ + ++F + +G +ND +V+ + ++ FGG + SG+G +
Sbjct: 404 DTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDS-PNIAFGGNKASGVGRFGNP 462
Query: 265 FSFDVFSHKK 274
+ + F+ K
Sbjct: 463 WVVEEFTVTK 472
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 12/254 (4%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNG 85
+ TG+ +++ A + +ELGGK+PV VFD V G + N G
Sbjct: 241 VSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYY--NAG 298
Query: 86 QACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDD 144
Q C + I K Y G ES +L + + H R+ K +++
Sbjct: 299 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEE 358
Query: 145 DKVSG--KIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 201
K +G K++ GGE+ K N APTLL +D I+ +E+FGP++ + D E +
Sbjct: 359 AKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 418
Query: 202 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-- 259
N LA+ ++T + + + G +N + V +P GG + SG G
Sbjct: 419 WANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTH--FMLVSEMPHGGQKLSGYGKD 476
Query: 260 -AYHGKFSFDVFSH 272
+ +G + V H
Sbjct: 477 MSLYGLEDYTVVRH 490
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 8/259 (3%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 86
+ +TG++ V R ++ A+ + + LELGG +P + +L+ A +I K+ GQ
Sbjct: 230 LSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFR-GGGQ 288
Query: 87 ACISPDHIITTKDYAPXXXXXXXXXXXXF-YGKNPLESKDLSRIVNSNHFARLSKLLDDD 145
C+ + I + A G + D+ ++N F ++ + L D
Sbjct: 289 TCVCANRIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDA 348
Query: 146 KVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 202
G + G++ + L PT++ V R+ EE FGPL+P E+ D
Sbjct: 349 LDKGASLVAGKQPAELGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDA 408
Query: 203 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH 262
N LA+Y+FT + + Q+ + G + N PFGG + SG+G
Sbjct: 409 GNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGXKASGIGREG 466
Query: 263 GKFSFDVFSHKKAVLSRGF 281
G F + V RGF
Sbjct: 467 GLEGLFEFVEAQTV-PRGF 484
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 6/251 (2%)
Query: 27 ICYTGNSRVARIV--MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
I +TG++ V R V +A + V LELGG +P V + ++ A + +G + +
Sbjct: 232 ISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQ 290
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP-LESKDLSRIVNSNHFARLSKLLD 143
GQ C+S + +I +P E + ++N + + L + ++
Sbjct: 291 GQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIE 350
Query: 144 DDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII 203
K G V + +L + P + DV D I EEIFGPL+ +L D + ++
Sbjct: 351 LAKKEGATVQVEGPIEGRL-VHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELA 409
Query: 204 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 263
N+ L+A +++ + QF + +G + IND V+ H + FGG + SG+G ++G
Sbjct: 410 NASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVM-FGGSKNSGLGRFNG 468
Query: 264 KFSFDVFSHKK 274
++ + F+ +
Sbjct: 469 DWAIEEFTTDR 479
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 26 KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
KI +TG++ V + +M + A ++ V LELGGKSP++ + +L A +M M N
Sbjct: 260 KIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNK 318
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKL 141
G+ CI+ + + NPLE R N NH A L KL
Sbjct: 319 GENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKL 373
Query: 142 LD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVD 194
++ K +V GG + + PT+ DV I EE FGP++ I
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 195 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 254
++ N+ LA+ +FT + + + AG + IN + + PFGG +
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFK 491
Query: 255 ESGMGAYHGKFSFDVFSHKKAV 276
+SG G G+ + + + K V
Sbjct: 492 QSGFGKDLGEAALNEYLRIKTV 513
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 12/247 (4%)
Query: 19 LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 78
+ D + + TG+ R V AA K+L ELGG + + +V R ++
Sbjct: 197 IADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIVLDDADPQV-LRNVLND 255
Query: 79 KWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF--- 135
N+GQ C S II K +PLE+ NS
Sbjct: 256 ARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEK 315
Query: 136 --ARLSKLLDDDKVSGKIVHG-GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 192
A++ + +D K+ + E D PT+L D+ +D+ + +E+FGP+ +
Sbjct: 316 LEAQVKEAID---AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFV 372
Query: 193 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 252
V+ + + N + L + + ++ ++ + G VIN + LPFGG
Sbjct: 373 VEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVIN--GRWITSGELPFGG 430
Query: 253 VQESGMG 259
+++SG G
Sbjct: 431 IKKSGYG 437
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 26 KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
KI +TG++ V + +M + A ++ V L+LGGKSP++ + +L A +M M N
Sbjct: 260 KIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAV-QMGMSSVFFNK 318
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKL 141
G+ CI+ + + NPLE R N NH A L KL
Sbjct: 319 GENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKL 373
Query: 142 LD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVD 194
++ K +V GG + + PT+ DV I EE FGP++ I
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 195 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 254
++ N+ LA+ +FT + + + AG + IN + + PFGG +
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFK 491
Query: 255 ESGMGAYHGKFSFDVFSHKKAV 276
+SG G G+ + + + K V
Sbjct: 492 QSGFGKDLGEAALNEYLRIKTV 513
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 164 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 223
+ PT+ +V + I +EIF P+L ++ V ++++ +I N A LFT+N +
Sbjct: 363 VGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIR 422
Query: 224 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH--GKFSFDVFSHKKAVLSR 279
F E + AG L IN V + PF G + S G H GK S D ++ KK V +R
Sbjct: 423 YFRENIDAGMLGIN-LGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 19/262 (7%)
Query: 26 KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
KI +TG++ V + +M + A ++ V L LGGKSP++ + +L A +M M N
Sbjct: 260 KIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAV-QMGMSSVFFNK 318
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKL 141
G+ CI+ + + NPLE R N NH A L KL
Sbjct: 319 GENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKL 373
Query: 142 LD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVD 194
++ K +V GG + + PT+ DV I EE FGP++ I
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 195 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 254
++ N+ LA+ +FT + + + AG + IN + + PFGG +
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFK 491
Query: 255 ESGMGAYHGKFSFDVFSHKKAV 276
+SG G G+ + + + K V
Sbjct: 492 QSGFGKDLGEAALNEYLRIKTV 513
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)
Query: 25 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGK-SPVVF-DSGIN-LKVACRRMIMGKWG 81
+ I +TG++R + + A+ L V LELGGK + ++F D+ I+ L+ R
Sbjct: 242 EMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFY---- 297
Query: 82 CNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSK 140
N+GQ+C +P ++ + Y G + +V+ + ++
Sbjct: 298 -NSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQD 356
Query: 141 LLDDDKVSG-KIVHGG-------ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 192
L+ G +V GG ER + PT+ DV I EEIFGP+L +L
Sbjct: 357 LIQSGIDEGATLVTGGTGLPMGMERG---YYVRPTVFADVKPHMRIFREEIFGPVLSLLP 413
Query: 193 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP--- 249
+ +++ + N L Y+ + ++ ++ V +G + +N H LP
Sbjct: 414 FNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-------HELPGGS 466
Query: 250 -FGGVQESGMGAYHGKFSFDVFSHKKAV 276
FGGV+ SG G + F KA+
Sbjct: 467 YFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 19/262 (7%)
Query: 26 KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
KI +TG++ V + +M + A ++ V LELGGKSP++ + +L A +M M N
Sbjct: 260 KIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNK 318
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKL 141
G+ I+ + + NPLE R N NH A L KL
Sbjct: 319 GENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKL 373
Query: 142 LD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVD 194
++ K +V GG + + PT+ DV I EE FGP++ I
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 195 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 254
++ N+ LA+ +FT + + + AG + IN + + PFGG +
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFK 491
Query: 255 ESGMGAYHGKFSFDVFSHKKAV 276
+SG G G+ + + + K V
Sbjct: 492 QSGFGKDLGEAALNEYLRIKTV 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 19/262 (7%)
Query: 26 KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
KI +TG++ V + +M + A ++ V LELGGKSP++ + +L A +M M N
Sbjct: 260 KIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAV-QMGMSSVFFNK 318
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKL 141
G+ I+ + + NPLE R N NH A L KL
Sbjct: 319 GENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKL 373
Query: 142 LD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVD 194
++ K +V GG + + PT+ DV I EE FGP++ I
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 195 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 254
++ N+ LA+ +FT + + + AG + IN + + PFGG +
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFK 491
Query: 255 ESGMGAYHGKFSFDVFSHKKAV 276
+SG G G+ + + + K V
Sbjct: 492 QSGFGKDLGEAALNEYLRIKTV 513
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 19/262 (7%)
Query: 26 KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 84
KI +TG++ V + +M + A ++ V L LGGKSP++ + +L A +M M N
Sbjct: 260 KIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAV-QMGMSSVFFNK 318
Query: 85 GQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVN---SNHFARLSKL 141
G+ I+ + + NPLE R N NH A L KL
Sbjct: 319 GENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE-----RDTNHGPQNHEAHLRKL 373
Query: 142 LD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI--LTVD 194
++ K +V GG + + PT+ DV I EE FGP++ I
Sbjct: 374 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433
Query: 195 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 254
++ N+ LA+ +FT + + + AG + IN + + PFGG +
Sbjct: 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFIN--TYNKTDVAAPFGGFK 491
Query: 255 ESGMGAYHGKFSFDVFSHKKAV 276
+SG G G+ + + + K V
Sbjct: 492 QSGFGKDLGEAALNEYLRIKTV 513
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 126 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 182
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 183 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 237
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 238 DTAVHLAVHSLPFGGVQESG 257
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 126 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 182
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 183 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 237
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 238 DTAVHLAVHSLPFGGVQESG 257
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 126 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 182
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 183 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 237
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 238 DTAVHLAVHSLPFGGVQESG 257
D + V PFGG + SG
Sbjct: 511 DKSTGSIVGQQPFGGARASG 530
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 126 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 182
S ++++ FAR+ K L+ + S I+ GG+ +++ + P ++ IM EE
Sbjct: 388 FSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEE 447
Query: 183 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 237
IFGP+L + DK ++ +++S T L +F +K + Q+ + +AG IN
Sbjct: 448 IFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYIN 507
Query: 238 DTAVHLAVHSLPFGGVQESG 257
D + V PFGG + SG
Sbjct: 508 DKSTGSVVGQQPFGGARASG 527
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 105/251 (41%), Gaps = 11/251 (4%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM-IMGKWGCNNG 85
+ TG+ + V+AAAAK + LELGGK+PV+ +L+ + G + N G
Sbjct: 243 VSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY--NAG 300
Query: 86 QACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDD 144
Q C + I Y Y + ++ +++ R++ ++
Sbjct: 301 QDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVER 360
Query: 145 --DKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 201
D+ +I GG ++ PT++ ++ I+ E+FGP++ + +D+
Sbjct: 361 AADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVA 420
Query: 202 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV-HSLPFGGVQESGMGA 260
N LA+ ++T + + + G IN H + + P GG+++SG G
Sbjct: 421 WANDSDYGLASSVWTKDISKAXRAASRLQYGCTWIN---THFXLTNEXPHGGIKQSGYGK 477
Query: 261 YHGKFSFDVFS 271
++ + ++
Sbjct: 478 DXSVYALEDYT 488
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 118/283 (41%), Gaps = 10/283 (3%)
Query: 11 GAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 70
GA T+ D++ D + +TG++ V ++V + LLELGG + ++ +L +
Sbjct: 225 GADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAIIVFEDADLNL 284
Query: 71 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIV 130
+ G GQ C + ++ + +P + L +
Sbjct: 285 VVPSAVFASVG-TAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPL 343
Query: 131 NSNHFA--RLSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPL 187
++ L+ + + G +V GG+ D+ + PT++ + D+ I+ E F P+
Sbjct: 344 HTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPI 403
Query: 188 LPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG---GLVINDTAVHLA 244
L +L E++F N + L++ +FT K L + F G G+V + A
Sbjct: 404 LYVLKFKTEEEAFAWNNEVQQGLSSSIFT--KDLGRVFRWLGPKGSDCGIVNVNIPTSGA 461
Query: 245 VHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV 287
FGG + +G G G S+ + +++ + + D+P+
Sbjct: 462 EIGGAFGGEKHTGGGRESGSDSWKQY-MRRSTCTINYSKDLPL 503
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 107/267 (40%), Gaps = 5/267 (1%)
Query: 11 GAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 70
GA T+ D++ + + +TG+++V + V + LLELGG + ++ +L +
Sbjct: 227 GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSL 286
Query: 71 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIV 130
+ G GQ C + + + NP + L +
Sbjct: 287 VVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPL 345
Query: 131 NSNHFAR--LSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPL 187
++ L + + K G +V+GG+ D+ + PT++ + D+ I E F P+
Sbjct: 346 HTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPI 405
Query: 188 LPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFVETVSAGGLVINDTAVHLAVH 246
L + E+ F N + L++ +FT + ++ + S G+V + A
Sbjct: 406 LYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEI 465
Query: 247 SLPFGGVQESGMGAYHGKFSFDVFSHK 273
FGG + +G G G ++ + +
Sbjct: 466 GGAFGGEKHTGGGRESGSDAWKQYMRR 492
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 101/265 (38%), Gaps = 16/265 (6%)
Query: 27 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 86
+ + G++ +AR V AA + G K+ + +L A +I +G + G+
Sbjct: 244 VSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYG-SAGE 302
Query: 87 ACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL--ESKDLSRIVNSNHFARLSKLLDD 144
C + + + P E D +V R+ L+D
Sbjct: 303 RCXAISVAVPVGEETANRLIDKLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDS 362
Query: 145 DKVSG-KIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 197
G K+V G RD +N I L DV D I EIFGP+L ++ E
Sbjct: 363 GIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYE 421
Query: 198 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-DTAVHLAVHSLPFGGVQES 256
++ + ++T + + F ++ G + +N V LA HS FGG + S
Sbjct: 422 EALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGXVGVNVPIPVPLAYHS--FGGWKSS 479
Query: 257 GMG--AYHGKFSFDVFSHKKAVLSR 279
G HG S ++ K + SR
Sbjct: 480 SFGDLNQHGTDSIKFWTRTKTITSR 504
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%)
Query: 167 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 226
T++ + + I EEIFGP+L ++ + + + NS L +F+ + + +
Sbjct: 896 TIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955
Query: 227 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 263
G L IN V PFGG + SG+G G
Sbjct: 956 REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 11/240 (4%)
Query: 25 DKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
D + +TG+SR ++ + +L LE GG +P+V + +L A +I + +
Sbjct: 219 DGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAF-IS 277
Query: 84 NGQACISPDHIITTKD------YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFAR 137
GQ C ++ + A F + + + + H +
Sbjct: 278 AGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLK 337
Query: 138 LSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 197
+ L + D L + P +L DV + EE FGPLL ++
Sbjct: 338 AQEHLIGKGAQPLLAXTQPIDGAAL-LTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFA 395
Query: 198 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 257
+ N+ LAA L +++++ +QF+ S G+V + + A S PFGG+ SG
Sbjct: 396 AAIREANATQYGLAAGLLSDSRERFEQFL-VESRAGIVNWNKQLTGAASSAPFGGIGASG 454
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 32.3 bits (72), Expect = 0.36, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 95/243 (39%), Gaps = 10/243 (4%)
Query: 27 ICYTGNSRVARIV---MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCN 83
+ +TG++ VAR + +AA + P++ E GG + ++ D+ + ++ + +
Sbjct: 731 VVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFR-S 789
Query: 84 NGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE-SKDLSRIVNSNHFARLSKLL 142
GQ C + + +D A +P + + + +++ RL +
Sbjct: 790 AGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI 849
Query: 143 DDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV--DKIEDSF 200
K ++ G + +AP + L +EE+FGP+L ++ + +E
Sbjct: 850 ARMKTEARLHFAGPAPEGCF-VAPHIFELTEAGQL--TEEVFGPILHVVRYRPENLERVL 906
Query: 201 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 260
I L + + + ++ V G + +N + V PFGG SG G
Sbjct: 907 RAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGP 966
Query: 261 YHG 263
G
Sbjct: 967 KAG 969
>pdb|2WYB|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq With A Covalently Bound Dodecanoic Acid
pdb|2WYC|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq In Complex With 3-Oxo-Lauric Acid
pdb|2WYD|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq In Complex With Dodecanoic Acid
pdb|2WYE|B Chain B, The Quorum Quenching N-Acyl Homoserine Lactone Acylase
Pvdq Is An Ntn-Hydrolase With An Unusual
Substrate-Binding Pocket
pdb|3L91|B Chain B, Structure Of Pseudomonas Aerugionsa Pvdq Bound To
Octanoate
pdb|3L94|B Chain B, Structure Of Pvdq Covalently Acylated With Myristate
pdb|3SRA|B Chain B, Structure Of Pseudomonas Aerugionsa Pvdq Covalently
Acylated With Myristic Acid From Pvdiq
pdb|3SRB|B Chain B, Structure Of Pseudomonas Aeruginosa Pvdq Bound To Smer28
pdb|3SRC|B Chain B, Structure Of Pseudomonas Aeruginosa Pvdq Bound To Ns2028
Length = 546
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 117 GKNPLESKDLSRIVNSNHFARLSKLLDD 144
GK PLE+K L +V +NH ++L D
Sbjct: 307 GKQPLEAKTLEEMVTANHVFSADQVLPD 334
>pdb|1FNN|A Chain A, Crystal Structure Of Cdc6p From Pyrobaculum Aerophilum
pdb|1FNN|B Chain B, Crystal Structure Of Cdc6p From Pyrobaculum Aerophilum
Length = 389
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 252 GVQESGMGAYHGKFSFDVFSHKKAVL------SRGFIGDVPVRYPPYTKGKL 297
G + +GA+ + + + H AVL +RG +G +R+ PYTK ++
Sbjct: 149 GQEADKLGAF--RIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQI 198
>pdb|2RSM|A Chain A, Solution Structure And Sirna-Mediated Knockdown Analysis
Of The Mitochondrial Disease-Related Protein C12orf65
(Ict2)
Length = 115
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 205 SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 251
+G K A L N +L++QFV+ GG N T+ + + +P G
Sbjct: 32 AGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSG 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,440,544
Number of Sequences: 62578
Number of extensions: 387308
Number of successful extensions: 1111
Number of sequences better than 100.0: 87
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 878
Number of HSP's gapped (non-prelim): 90
length of query: 321
length of database: 14,973,337
effective HSP length: 99
effective length of query: 222
effective length of database: 8,778,115
effective search space: 1948741530
effective search space used: 1948741530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)