Query 020764
Match_columns 321
No_of_seqs 204 out of 475
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 07:50:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020764.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020764hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bze_A KIAA0252 protein; human 100.0 2E-38 6.9E-43 276.0 10.7 128 163-293 21-153 (153)
2 3u1u_A RNA polymerase-associat 100.0 9.1E-39 3.1E-43 273.2 6.5 128 160-291 5-137 (137)
3 1v32_A AT5G08430, hypothetical 100.0 7.7E-35 2.6E-39 238.1 9.6 93 32-124 6-98 (101)
4 1v31_A Hypothetical protein RA 99.9 2.4E-26 8.1E-31 185.0 5.9 75 42-122 14-88 (93)
5 1uhr_A SWI/SNF related, matrix 99.9 2.7E-26 9.4E-31 184.7 5.2 75 42-122 14-88 (93)
6 1z1m_A Ubiquitin-protein ligas 96.9 0.0024 8.1E-08 53.2 7.2 81 43-124 31-112 (119)
7 3dac_M MDM4 protein; MDMX, MDM 96.8 0.002 6.9E-08 54.3 6.4 76 43-119 28-107 (130)
8 1ycq_A MDM2, MDM2; anti-oncoge 96.6 0.0039 1.3E-07 51.0 6.6 74 43-117 15-89 (107)
9 3fea_A MDM4 protein; HDMX, HDM 96.3 0.0057 2E-07 49.6 5.7 75 43-118 19-97 (100)
10 2z5s_M MDM4 protein, zebrafish 96.1 0.0085 2.9E-07 50.9 6.0 74 43-117 27-101 (140)
11 2axi_A Ubiquitin-protein ligas 96.1 0.0054 1.8E-07 50.7 4.5 75 43-118 15-90 (115)
12 2w6a_A ARF GTPase-activating p 59.3 40 0.0014 24.8 7.0 49 250-310 4-52 (63)
13 2do5_A Splicing factor 3B subu 57.4 24 0.00083 25.3 5.4 43 35-80 5-48 (58)
14 1hlv_A CENP-B, major centromer 40.7 40 0.0014 26.2 5.0 36 257-293 77-112 (131)
15 1f80_D Acyl carrier protein; t 39.6 24 0.00083 25.2 3.3 58 60-120 2-59 (81)
16 2kwl_A ACP, acyl carrier prote 37.9 32 0.0011 24.8 3.8 60 59-121 3-62 (84)
17 1x4t_A Hypothetical protein LO 37.3 53 0.0018 26.0 5.1 31 257-296 22-52 (92)
18 2lol_A ACP, acyl carrier prote 29.5 73 0.0025 22.5 4.5 57 61-120 2-58 (81)
19 2cnr_A FAS, ACP, acyl carrier 28.5 72 0.0025 22.5 4.3 58 61-121 3-60 (82)
20 1dv5_A APO-DCP, APO-D-alanyl c 26.4 38 0.0013 24.6 2.5 57 62-121 1-57 (80)
21 2dnw_A Acyl carrier protein; A 22.7 1E+02 0.0034 23.1 4.3 60 58-120 8-67 (99)
22 2rbd_A BH2358 protein; putativ 20.8 43 0.0015 28.1 2.0 68 253-321 95-162 (171)
23 2rm4_A CG6311-PB, DM EDC3; enh 20.6 2.6E+02 0.0089 22.4 6.3 61 190-256 6-77 (103)
No 1
>2bze_A KIAA0252 protein; human RTF1 PLUS3 domain, transcription, elongation, PAF1 complex, histone H3 methylation, H2B ubiquitination, CDC73, LEO1, CTR9; NMR {Homo sapiens} SCOP: b.34.21.1
Probab=100.00 E-value=2e-38 Score=275.97 Aligned_cols=128 Identities=19% Similarity=0.296 Sum_probs=117.0
Q ss_pred cccCccccceeeeeHHHHHHHhcCcccccccccccEEEEecCCCCCCCcCceeEEEEeeeeecCC---CCccccceeEEE
Q 020764 163 AAIVPDNIKLVYLKRSLVQDLLKDSETFECKVVGSFVRVKSDPNDYLQKNSHQLLQVIGTKKVPG---TDDKSTEILLKV 239 (321)
Q Consensus 163 aai~~~nI~~I~L~Rs~l~~l~~~P~~Fe~~VvGcFVRI~ig~~~~t~~~~YRL~qV~Gv~~~~~---~G~~~Td~~L~v 239 (321)
.+.+.+||++|||+|++|++||++| +|+++|+||||||+||++. ++++||||||+|+.++.+ +|++.||++|.+
T Consensus 21 ~v~~l~di~~irL~Rs~l~~~~~~P-~Fe~~V~GcFVRV~ig~~~--~~~~YRl~qI~gv~~~~k~Y~l~~~~T~~~L~l 97 (153)
T 2bze_A 21 MVSLPEELNRVRLSRHKLERWCHMP-FFAKTVTGCFVRIGIGNHN--SKPVYRVAEITGVVETAKVYQLGGTRTNKGLQL 97 (153)
T ss_dssp BCCCHHHHHHSEECHHHHHHHSSSS-SCHHHHTTCEEEEESSTTS--SSCCEEEEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CcCCHHHhhheEEEHHHHHHHhcCC-chhHheEEEEEEEEeCCCC--CCccEEEEEEEeEEecCcccccCCcccceEEEE
Confidence 3448889999999999999999999 7999999999999999864 568999999999998776 578899999999
Q ss_pred eC--CceeEEeeeecCCCCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Q 020764 240 SN--FVKDIRIATLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDIT 293 (321)
Q Consensus 240 ~~--~~k~~~i~~~Sd~~FTEeE~~r~~q~~~~~~~~~PTv~dl~eKa~~i~~~i~ 293 (321)
.+ ..++|+|++|||++|||+||++|++.|+++++++||+++|++|+++|++++|
T Consensus 98 ~~g~~~r~~~m~~vSN~~fte~Ef~~w~~~~~~~~~~~PT~~~v~~K~~~i~~a~n 153 (153)
T 2bze_A 98 RHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEALN 153 (153)
T ss_dssp ESSSCEEEECGGGBCCSCCCHHHHHHHHHHHHHHTCCCCBHHHHHHHHHHHHHHC-
T ss_pred EECCcceEEEeeEeeCCCCCHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhC
Confidence 54 3469999999999999999999999999999999999999999999999975
No 2
>3u1u_A RNA polymerase-associated protein RTF1 homolog; plus-3, transcription elongation, structural genomics, struc genomics consortium, SGC; 1.80A {Homo sapiens} PDB: 2db9_A
Probab=100.00 E-value=9.1e-39 Score=273.24 Aligned_cols=128 Identities=20% Similarity=0.281 Sum_probs=113.9
Q ss_pred ccccccCccccceeeeeHHHHHHHhcCcccccccccccEEEEecCCCCCCCcCceeEEEEeeeeecCC---CCcccccee
Q 020764 160 SCWAAIVPDNIKLVYLKRSLVQDLLKDSETFECKVVGSFVRVKSDPNDYLQKNSHQLLQVIGTKKVPG---TDDKSTEIL 236 (321)
Q Consensus 160 ~~~aai~~~nI~~I~L~Rs~l~~l~~~P~~Fe~~VvGcFVRI~ig~~~~t~~~~YRL~qV~Gv~~~~~---~G~~~Td~~ 236 (321)
..+.+ +.+||++|||+|++|++||++| +|+++|+||||||+||+++ ++++||||||+||.++.+ +|.+.||++
T Consensus 5 ~~~v~-~l~dl~~i~L~R~~l~~~~~~P-~Fe~~V~GcFVRv~ig~~~--~~~~Yrl~qI~gv~~~~k~Y~l~~~~T~~~ 80 (137)
T 3u1u_A 5 SQPVS-LPEELNRVRLSRHKLERWCHMP-FFAKTVTGCFVRIGIGNHN--SKPVYRVAEITGVVETAKVYQLGGTRTNKG 80 (137)
T ss_dssp TSBCC-SHHHHHTTBCCHHHHHHHTTST-THHHHHTTCEEEEEEEC------CEEEEEEEEEEEEEEEEEEETTEEEEEE
T ss_pred cCCCC-CHHHhcceEEEHHHHHHHhcCC-ChhHheEEEEEEEEeCCCC--CCccEEEEEEEEEEecCcccccCCceeeEE
Confidence 34555 8899999999999999999999 8999999999999999986 568999999999987655 588999999
Q ss_pred EEEe-C-CceeEEeeeecCCCCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Q 020764 237 LKVS-N-FVKDIRIATLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHED 291 (321)
Q Consensus 237 L~v~-~-~~k~~~i~~~Sd~~FTEeE~~r~~q~~~~~~~~~PTv~dl~eKa~~i~~~ 291 (321)
|.+. | ..++|+|++|||++|||+||++|++.|+++++++||+++|++|+++|+++
T Consensus 81 L~l~~g~~~r~~~~~~vSN~~fte~E~~~w~~~~~~~~~~~Pt~~~l~~K~~~i~~a 137 (137)
T 3u1u_A 81 LQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEA 137 (137)
T ss_dssp EEEEETTEEEEEEGGGBCSSCCCHHHHHHHHHHHHHHTCCCCBHHHHHHHHHHTCCC
T ss_pred EEEEeCCcceEEEeeeecCCCCCHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhC
Confidence 9994 4 34799999999999999999999999999999999999999999999864
No 3
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=100.00 E-value=7.7e-35 Score=238.14 Aligned_cols=93 Identities=54% Similarity=0.922 Sum_probs=88.2
Q ss_pred CCCcccccCCCCHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHH
Q 020764 32 RSKKVKFDGWGSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDL 111 (321)
Q Consensus 32 ~~k~~~~~~w~S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~kl 111 (321)
.+|+.+|+||+|++|++||++||.+|++++||++|++.||+|||+||||||.|||.|+||++|++|||+++|+||+|+++
T Consensus 6 ~~~~~~~~~w~S~eLa~fl~~iG~~~~~~~sR~eVvk~lW~YIK~nnLQdp~~Kr~I~cD~kLk~lFg~~~v~~~~m~kl 85 (101)
T 1v32_A 6 SGKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDL 85 (101)
T ss_dssp CSSCCSSSSSSCHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHH
T ss_pred CCCcceecccCCHHHHHHHHHcCCCCccccCHHHHHHHHHHHHHhhcCcCcccCCeeeccHHHHHHHCCCcccHHHHHHH
Confidence 35677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCC
Q 020764 112 LEAHYAENQFESD 124 (321)
Q Consensus 112 L~~H~~~~~~~s~ 124 (321)
|.+||.++++.++
T Consensus 86 L~~Hl~~~~e~~~ 98 (101)
T 1v32_A 86 LEKHYKENQDSGP 98 (101)
T ss_dssp HHHHSCSCCCCCS
T ss_pred HHHHcCcccccCC
Confidence 9999999876543
No 4
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=99.92 E-value=2.4e-26 Score=185.01 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=72.3
Q ss_pred CCHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 020764 42 GSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (321)
Q Consensus 42 ~S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (321)
+|++|++||| ..++||++|++.||+|||+||||||.||+.|+||++|+.|||+++|.||+|+++|++||.+.+|
T Consensus 14 lS~~La~~lG------~~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~L~~lfg~~~v~~~~~~klL~~Hl~p~~P 87 (93)
T 1v31_A 14 LSTALMDVLG------IEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPP 87 (93)
T ss_dssp CCHHHHHHSC------CSEECSHHHHHHHHHHHHHTTCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCBCCCC
T ss_pred cCHHHHHHHC------CCccCHHHHHHHHHHHHHHccCcCcccCceeehhHHHHHHhCCCcccHHHHHHHHHHhcCCCCC
Confidence 8999999997 5799999999999999999999999999999999999999999999999999999999998887
Q ss_pred C
Q 020764 122 E 122 (321)
Q Consensus 122 ~ 122 (321)
.
T Consensus 88 i 88 (93)
T 1v31_A 88 S 88 (93)
T ss_dssp S
T ss_pred e
Confidence 5
No 5
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=99.92 E-value=2.7e-26 Score=184.71 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=72.3
Q ss_pred CCHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 020764 42 GSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (321)
Q Consensus 42 ~S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (321)
+|++|++||| ..++||++|++.||+|||+||||||.||+.|+||++|+.|||+++|.||+|+++|++||...+|
T Consensus 14 lS~~La~~lG------~~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~Lk~lfg~~~v~~~~~~klL~~Hl~p~~P 87 (93)
T 1uhr_A 14 LDPRLARLLG------IHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 87 (93)
T ss_dssp ECTTHHHHTC------CSEEEHHHHHHHHHHHHHHTTCBCSSCSSEECCCTTHHHHTCCSSEEGGGSHHHHHHHEECSSC
T ss_pred cCHHHHHHHC------CCccCHHHHHHHHHHHHHhccCCCccccceeechHHHHHHhCCCcccHHHHHHHHHHhcCCCCC
Confidence 6999999997 5899999999999999999999999999999999999999999999999999999999998887
Q ss_pred C
Q 020764 122 E 122 (321)
Q Consensus 122 ~ 122 (321)
.
T Consensus 88 I 88 (93)
T 1uhr_A 88 S 88 (93)
T ss_dssp C
T ss_pred e
Confidence 5
No 6
>1z1m_A Ubiquitin-protein ligase E3 MDM2; peptide-binding groove, psudosymmetry, alpha-beta domains; NMR {Homo sapiens}
Probab=96.90 E-value=0.0024 Score=53.18 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=69.4
Q ss_pred CHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecchh-hhhhhCCCccchHhHHHHHHhccccCCC
Q 020764 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDER-LLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (321)
Q Consensus 43 S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDek-Lk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (321)
.++|..+|...|... ...+..+|.-.+-.||=...|.||.+.+.|.|... |-.|||..++.+-+-..+...|......
T Consensus 31 k~~LLkiLq~aGA~~-~vfT~keV~~YLgqYIm~KqLyd~~~qhiV~C~~D~LG~l~g~~~Fsvkdp~~l~~ml~~nLv~ 109 (119)
T 1z1m_A 31 KPLLLKLLKSVGAQK-DTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV 109 (119)
T ss_dssp STTSHHHHHHHTCCC-SCCCTTHHHHHHHHHHHTTTCSCSSSSCEECCTTSHHHHHSCCSCEETTCHHHHHHHHSCSCCC
T ss_pred cHHHHHHHHHhcccc-ceeechheeehhhhhhhHhhhcccccCcEEeeCCcccccccCccceeecCcHHHHHHHHHhccc
Confidence 458999999888764 78999999999999999999999999999999654 5889999999999988888888765444
Q ss_pred CCC
Q 020764 122 ESD 124 (321)
Q Consensus 122 ~s~ 124 (321)
.++
T Consensus 110 ~~~ 112 (119)
T 1z1m_A 110 VNQ 112 (119)
T ss_dssp CCC
T ss_pred ccc
Confidence 433
No 7
>3dac_M MDM4 protein; MDMX, MDM4, HDMX, HDM4, MDM-4, MDM-X, MDM2, HDM2, nucleus, oncogene, apoptosis, cell cycle, disease mutation; 1.80A {Danio rerio}
Probab=96.83 E-value=0.002 Score=54.28 Aligned_cols=76 Identities=18% Similarity=0.327 Sum_probs=67.9
Q ss_pred CHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecc-hhhhhhhCCCccchHh---HHHHHHhcccc
Q 020764 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSD-ERLLSLFGKKSFLRIK---IYDLLEAHYAE 118 (321)
Q Consensus 43 S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CD-ekLk~lFgk~~v~~f~---m~klL~~H~~~ 118 (321)
-++|..+|.+.|.. ...++..+|.-.+=.||-.+.|.||.+...|-|- +-|..|||++++++-+ +...|.+++..
T Consensus 28 k~~lL~iLq~aGA~-~dvfT~keVm~YLgqYI~~KqLyd~~~qhiV~C~~D~LG~llGv~sFSVkdp~~L~~mL~~NLv~ 106 (130)
T 3dac_M 28 RAPLLQILKVAGAQ-EEVFTVKEVMHYLGQYIMMKQLYDKQRQHIVHCHDDPLGELLEVGSFSVKNPSPLYEMLKRNLVI 106 (130)
T ss_dssp CHHHHHHHHHTTCC-CSSEEHHHHHHHHHHHHHHHTCBCSSSTTEEECTTSHHHHHHTSSEEETTSCHHHHHHHHHHEEE
T ss_pred cHHHHHHHHHhccC-cceeehHHHHHHHHHhhhhhhccCccccceeEeCCcccccccCCcceeecCcHHHHHHHHhheec
Confidence 46899999988865 5789999999999999999999999999999995 5577799999999999 99999999886
Q ss_pred C
Q 020764 119 N 119 (321)
Q Consensus 119 ~ 119 (321)
-
T Consensus 107 ~ 107 (130)
T 3dac_M 107 L 107 (130)
T ss_dssp C
T ss_pred c
Confidence 3
No 8
>1ycq_A MDM2, MDM2; anti-oncogene, DNA-binding, transcription regulation, nuclear protein, complex (oncogene protein/peptide), phosphorylation, activator; 2.30A {Xenopus laevis} SCOP: a.42.1.1
Probab=96.63 E-value=0.0039 Score=51.03 Aligned_cols=74 Identities=19% Similarity=0.249 Sum_probs=64.6
Q ss_pred CHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecchh-hhhhhCCCccchHhHHHHHHhccc
Q 020764 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDER-LLSLFGKKSFLRIKIYDLLEAHYA 117 (321)
Q Consensus 43 S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDek-Lk~lFgk~~v~~f~m~klL~~H~~ 117 (321)
.++|..+|...|... ...+..+|.-.|-.||=...|.||.+...|.|... |-.|||+.++++-+-..+...|..
T Consensus 15 k~~LLklL~~~GA~~-~~fT~keVm~YLgqYI~~KqLyd~~~qhiV~C~~D~LG~l~g~~~Fsvkdp~~l~~ml~~ 89 (107)
T 1ycq_A 15 TPLLLSLLKSAGAQK-ETFTMKEVIYHLGQYIMAKQLYDEKQQHIVHCSNDPLGELFGVQEFSVKEPRRLYAMISR 89 (107)
T ss_dssp CHHHHHHHHHTTCCC-SCBCHHHHHHHHHHHHHHHTCBCSSSTTEEECTTSHHHHHHTCSEEETTCHHHHHHHHHT
T ss_pred cHHHHHHHHHhcccc-ceeeehhhhhhHHHHHhHHhhcccccCcEEeeCCcccccccCccceeecCcHHHHHHHHH
Confidence 468999999988764 78999999999999999999999999999999655 588999999999888866666654
No 9
>3fea_A MDM4 protein; HDMX, HDM4,human MDM4, human MDMX, protein-protein interaction, metal-binding; HET: PM3 6CW; 1.33A {Homo sapiens} SCOP: a.42.1.0 PDB: 3fe7_A* 3u15_A* 2vyr_A 3lbj_E* 3fdo_A 3dab_A 3jzp_A 3jzo_A 3jzq_A 3eqy_A
Probab=96.33 E-value=0.0057 Score=49.55 Aligned_cols=75 Identities=21% Similarity=0.419 Sum_probs=65.7
Q ss_pred CHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecch-hhhhhhCCCccchH---hHHHHHHhcccc
Q 020764 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDE-RLLSLFGKKSFLRI---KIYDLLEAHYAE 118 (321)
Q Consensus 43 S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDe-kLk~lFgk~~v~~f---~m~klL~~H~~~ 118 (321)
-++|..+|.+.|.. ...++..+|.-.+=.||-.+.|.||.+...|.|.. -|-.+||++++++- .+...|.+|+..
T Consensus 19 k~~lL~iLq~aGA~-~d~fT~keVm~YLgqYI~~KqLyd~~~qhiV~C~~D~LG~l~G~~sFsvkdp~~l~~ml~~nLv~ 97 (100)
T 3fea_A 19 KLPLLKILHAAGAQ-GEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRKNLVT 97 (100)
T ss_dssp CHHHHHHHHHTTCC-SSCBCHHHHHHHHHHHHHHTTCEETTEEEEEECTTSHHHHHHTCSEEETTCCHHHHHHHHHHEEC
T ss_pred cHHHHHHHHHhccC-cceeehHHHHHHHHHhhhhhhccCccccceEEeCCCccccccCCcceeecCchHHHHHHHhhcee
Confidence 46899999988865 57899999999999999999999999999999964 56679999999988 788888888764
No 10
>2z5s_M MDM4 protein, zebrafish MDMX; MDMX, MDM4, acetylation, activator, anti-oncogene, apoptosis, cell cycle, cytoplasm, disease mutation, DNA- binding; 2.30A {Danio rerio} PDB: 2z5t_M
Probab=96.13 E-value=0.0085 Score=50.86 Aligned_cols=74 Identities=18% Similarity=0.241 Sum_probs=63.5
Q ss_pred CHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecchh-hhhhhCCCccchHhHHHHHHhccc
Q 020764 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDER-LLSLFGKKSFLRIKIYDLLEAHYA 117 (321)
Q Consensus 43 S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDek-Lk~lFgk~~v~~f~m~klL~~H~~ 117 (321)
-++|..+|...|.- ...++..+|.-.|-.||=...|.||.+...|.|... |-.|||+.++++-+-..+...+..
T Consensus 27 k~~LLkiLq~aGA~-~~~fT~keVm~YLGqYIm~KqLYD~~~qhiV~C~~D~LG~l~Gv~sFSVKdp~~ly~ML~~ 101 (140)
T 2z5s_M 27 RAPLLQILKVAGAQ-EEVFTLKEVMHYLGQYIMMKQLYDKQRQHIVHCHDDPLGELLEVGSFSVKNPSPVYEMLKR 101 (140)
T ss_dssp CHHHHHHHHHTTCC-CSCBCHHHHHHHHHHHHHHHTCBCSSSTTEEECTTSHHHHHHTSSEEETTBCHHHHHHHHH
T ss_pred cHHHHHHHHHhCcc-cceeeHHHHHHHHHHHHHHhhhcccccCcEEeeCCcccccccCccceeecCcHHHHHHHHH
Confidence 36899999988764 568999999999999999999999999999999654 588999999999887766666554
No 11
>2axi_A Ubiquitin-protein ligase E3 MDM2; drug design, protein-protein interactions, ligase, LIGA inhibitor complex; HET: 6CW MPO; 1.40A {Homo sapiens} SCOP: a.42.1.1 PDB: 1ycr_A 2gv2_A* 1t4f_M* 3jzr_A 3g03_A 3tu1_A* 3jzk_A* 1t4e_A* 3lbl_A* 4dij_A* 3lbk_A* 3v3b_A* 3jzs_A 3eqs_A 3iux_A* 3iwy_A* 3lnj_A* 3lnz_A 1rv1_A* 1ttv_A*
Probab=96.09 E-value=0.0054 Score=50.73 Aligned_cols=75 Identities=20% Similarity=0.298 Sum_probs=65.5
Q ss_pred CHHHHHHHhhcCCCCCCccChHHHHHHHHHHhhhCCCCCCCCCCeeecchh-hhhhhCCCccchHhHHHHHHhcccc
Q 020764 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDER-LLSLFGKKSFLRIKIYDLLEAHYAE 118 (321)
Q Consensus 43 S~eL~~fl~~~g~~~~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDek-Lk~lFgk~~v~~f~m~klL~~H~~~ 118 (321)
.++|..+|...|... ...+..+|.-.+-.||=...|.||.+...|.|... |-.|||+.++++-+-..+...|...
T Consensus 15 k~~LLklLq~~GA~~-~vfT~keVm~YLgqYIm~KqLyd~~~qhiV~C~~D~LG~l~g~~~Fsvkdp~~l~~ml~~n 90 (115)
T 2axi_A 15 KPLLLKLLKSVGAQK-DTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRN 90 (115)
T ss_dssp CHHHHHHHHHTTCCC-SCEEHHHHHHHHHHHHHHHTCEETTEEEEEECTTSHHHHHHSSSEEETTCHHHHHHHHHTT
T ss_pred cHHHHHHHHHhcccc-ceeechhheehhhhhhhHhhhcccccCcEEeeCCcccccccCccceeecCcHHHHHHHHHh
Confidence 468999999988764 78999999999999999999999999999999654 5889999999998877777776653
No 12
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=59.33 E-value=40 Score=24.82 Aligned_cols=49 Identities=27% Similarity=0.266 Sum_probs=34.0
Q ss_pred eecCCCCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 020764 250 TLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHWLVRELALLQKLIDR 310 (321)
Q Consensus 250 ~~Sd~~FTEeE~~r~~q~~~~~~~~~PTv~dl~eKa~~i~~~i~~~w~e~El~rL~~lid~ 310 (321)
.+||.++|-+||-..+..+.. -+.|+..|- -++.=+.+||.+||+.+..
T Consensus 4 dlsDgpit~qeylevK~ALaa----------SeAkiQQLm--kVN~~ls~Elr~mQ~~lq~ 52 (63)
T 2w6a_A 4 GSSDGAVTLQEYLELKKALAT----------SEAKVQQLM--KVNSSLSDELRKLQREIHK 52 (63)
T ss_dssp C--CCSSCHHHHHHHHHHHHH----------HHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcchHHHHHHHHHHHHh----------hHHHHHHHH--HHhHhhhHHHHHHHHHHHH
Confidence 589999999999999888766 344444443 3555678889888886543
No 13
>2do5_A Splicing factor 3B subunit 2; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.42 E-value=24 Score=25.29 Aligned_cols=43 Identities=19% Similarity=0.417 Sum_probs=35.6
Q ss_pred cccccCCCCHHHHHHHhhcCCCCCC-ccChHHHHHHHHHHhhhCCCC
Q 020764 35 KVKFDGWGSIPLIEFLQSLGKDTTQ-QISRYDVTDIINKYVNENKLV 80 (321)
Q Consensus 35 ~~~~~~w~S~eL~~fl~~~g~~~~~-~lsr~~vvk~lw~YIK~nnLq 80 (321)
..-|..|.-+||+.=|+.+|. . +=+|.+.+.+|-.|.++-+.-
T Consensus 5 ~~~ygaW~~~ELQaKLaE~GA---Pi~g~REElvdRLk~Y~~QtGi~ 48 (58)
T 2do5_A 5 SSGYGAWAAQELQAKLAEIGA---PIQGNREELVERLQSYTRQTGIV 48 (58)
T ss_dssp CCCSCSSCHHHHHHHHHHHTC---CCCSCHHHHHHHHHHHHHHHCCC
T ss_pred CCCcccccCHHHHHHHHHhCC---cccccHHHHHHHHHHHhhcccee
Confidence 346778999999999999983 3 347999999999999887754
No 14
>1hlv_A CENP-B, major centromere autoantigen B; helix-turn-helix, protein-DNA complex, riken structural genomics/proteomics initiative, RSGI; 2.50A {Homo sapiens} SCOP: a.4.1.7 a.4.1.7 PDB: 1bw6_A
Probab=40.65 E-value=40 Score=26.22 Aligned_cols=36 Identities=19% Similarity=0.123 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Q 020764 257 SEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDIT 293 (321)
Q Consensus 257 TEeE~~r~~q~~~~~~~~~PTv~dl~eKa~~i~~~i~ 293 (321)
-|+.+-.|...+...+++ +|-..|.+||..|...+.
T Consensus 77 ~E~~L~~Wi~~~~~~g~p-vs~~~I~~kA~~i~~~~g 112 (131)
T 1hlv_A 77 LEGLLIAWFQQIRAAGLP-VKGIILKEKALRIAEELG 112 (131)
T ss_dssp HHHHHHHHHHHHGGGTCC-CCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHhC
Confidence 389999999999999988 999999999999998763
No 15
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=39.64 E-value=24 Score=25.16 Aligned_cols=58 Identities=12% Similarity=0.142 Sum_probs=44.7
Q ss_pred ccChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCC
Q 020764 60 QISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ 120 (321)
Q Consensus 60 ~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~klL~~H~~~~~ 120 (321)
+|++.++...|.++|.+.-=.+| ..|-.|..|..-+|-+++.+.++...|+.+|--..
T Consensus 2 ~m~~~~i~~~l~~~l~~~l~~~~---~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i 59 (81)
T 1f80_D 2 PLGSADTLERVTKIIVDRLGVDE---ADVKLEASFKEDLGADXLDVVELVMELEDEFDMEI 59 (81)
T ss_dssp ---CCHHHHHHHHHHHHHSSCCS---SCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCH---HhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCcc
Confidence 57888899999999887632233 35889999978899999999999999999986443
No 16
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=37.88 E-value=32 Score=24.79 Aligned_cols=60 Identities=12% Similarity=0.197 Sum_probs=48.5
Q ss_pred CccChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 020764 59 QQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (321)
Q Consensus 59 ~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (321)
..|++.++...|.+.|.+.-=.+| ..|-.|..|..-+|-+++.+.++...|+.+|--..+
T Consensus 3 ~~m~~~~i~~~l~~~i~~~l~~~~---~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~ 62 (84)
T 2kwl_A 3 GSMDNDEIFSKVRSIISEQLDKKE---DEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIP 62 (84)
T ss_dssp CCSTHHHHHHHHHHHHHHHHCCCG---GGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTT
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCc---ccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcC
Confidence 468999999999999988632233 368899999778999999999999999999965443
No 17
>1x4t_A Hypothetical protein LOC57905; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.2.15.1
Probab=37.33 E-value=53 Score=26.02 Aligned_cols=31 Identities=13% Similarity=0.232 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHhccc
Q 020764 257 SEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHW 296 (321)
Q Consensus 257 TEeE~~r~~q~~~~~~~~~PTv~dl~eKa~~i~~~i~~~w 296 (321)
+=.||++|+..+.. ||-+|+..||..--.++
T Consensus 22 ~l~~AekWR~qvik---------EIs~Kv~~Iqn~~L~E~ 52 (92)
T 1x4t_A 22 ELPKAEKWRRQIIG---------EISKKVAQIQNAGLGEF 52 (92)
T ss_dssp CHHHHHHHHHHHHH---------HHHHHHHHHHHCCSCHH
T ss_pred CHHHHHHHHHHHHH---------HHHHHHHHhhCCCCCHH
Confidence 56799999998854 78888888886655444
No 18
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=29.55 E-value=73 Score=22.51 Aligned_cols=57 Identities=12% Similarity=0.180 Sum_probs=45.1
Q ss_pred cChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCC
Q 020764 61 ISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ 120 (321)
Q Consensus 61 lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~klL~~H~~~~~ 120 (321)
|+|.++...|.+.|.+.-=.+| ..|-.|..|..-+|-+++...++...|+.+|--..
T Consensus 2 m~~~~i~~~l~~ii~~~l~~~~---~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i 58 (81)
T 2lol_A 2 STTDKIEQKVIEMVAEKLNKDK---AIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDI 58 (81)
T ss_dssp CSHHHHHHHHHHHHHHHSCCCT---TTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHHHHHHHHHHCCCh---hhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCC
Confidence 6788898999888887532233 24788888877789999999999999999985443
No 19
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=28.49 E-value=72 Score=22.45 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=45.5
Q ss_pred cChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 020764 61 ISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (321)
Q Consensus 61 lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (321)
|+|.++...|.++|.+.-=.+| ..|-.|..|..-+|-+++...++...|+.+|--..+
T Consensus 3 m~~~~i~~~l~~~i~~~l~~~~---~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~ 60 (82)
T 2cnr_A 3 ATQEEIVAGLAEIVNEIAGIPV---EDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIP 60 (82)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCT---TTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCC
T ss_pred CCHHHHHHHHHHHHHHHhCCCH---HHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCC
Confidence 7889999999999887532232 357788888666899999999999999999864443
No 20
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=26.40 E-value=38 Score=24.57 Aligned_cols=57 Identities=7% Similarity=-0.021 Sum_probs=43.5
Q ss_pred ChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 020764 62 SRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (321)
Q Consensus 62 sr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (321)
++.++...|.++|.+.--.++ -.|-.|..|..+-+-+++.+.++.-.|+.+|--..+
T Consensus 1 ~~~~i~~~i~~il~~~~~~~~---~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~ 57 (80)
T 1dv5_A 1 ADEAIKNGVLDILADLTGSDD---VKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAP 57 (80)
T ss_dssp CCHHHHHHHHHHHHHHHTSSS---TTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCC
T ss_pred CHHHHHHHHHHHHHHHhCCCc---ccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCC
Confidence 456788888888887653333 247888889777559999999999999999965544
No 21
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.67 E-value=1e+02 Score=23.13 Aligned_cols=60 Identities=8% Similarity=0.160 Sum_probs=47.5
Q ss_pred CCccChHHHHHHHHHHhhhCCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCC
Q 020764 58 TQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ 120 (321)
Q Consensus 58 ~~~lsr~~vvk~lw~YIK~nnLqdP~~Kr~I~CDekLk~lFgk~~v~~f~m~klL~~H~~~~~ 120 (321)
.+.|++.++...|.+.|.+.-=-+| ..|-.|..|..-+|-+++.+.++...|+.+|--..
T Consensus 8 m~~m~~~~i~~~l~~~l~~~l~~~~---~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i 67 (99)
T 2dnw_A 8 MPPLTLEGIQDRVLYVLKLYDKIDP---EKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 67 (99)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTSCT---TTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCH---hhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCC
Confidence 4679999999999999998632233 25777888855579999999999999999985443
No 22
>2rbd_A BH2358 protein; putative spore coat protein, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.54A {Bacillus halodurans c-125}
Probab=20.81 E-value=43 Score=28.05 Aligned_cols=68 Identities=12% Similarity=0.042 Sum_probs=48.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHccccccCC
Q 020764 253 DDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHWLVRELALLQKLIDRANVKGMAQRTP 321 (321)
Q Consensus 253 d~~FTEeE~~r~~q~~~~~~~~~PTv~dl~eKa~~i~~~i~~~w~e~El~rL~~lid~A~ekG~~~~~~ 321 (321)
+.+||+.++-.+...+...++..-+..-.+-=-.+|..++ .+++...++...+..+.+++|||=...|
T Consensus 95 ~ap~~D~~i~~~~l~~~k~~l~~~s~a~~es~r~Dir~~f-~~~~~~~~~~~~~i~~~m~~KGw~~~pP 162 (171)
T 2rbd_A 95 GARFNDPEISATISMDVAKGLVTCSQIIGQSIREDVALMF-SQFHMAKVQFGGKMLKLNKNKGWLIPPP 162 (171)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 4569999999999988887755555554443333433333 3456677788899999999999976654
No 23
>2rm4_A CG6311-PB, DM EDC3; enhancer of mRNA decapping, P-BODY component, SM-like protein,, protein binding; NMR {Drosophila melanogaster}
Probab=20.60 E-value=2.6e+02 Score=22.38 Aligned_cols=61 Identities=13% Similarity=0.153 Sum_probs=36.4
Q ss_pred ccccccccEEEEecCCCCCCCcCceeEEEEeeeeecCC-------CCc----cccceeEEEeCCceeEEeeeecCCCC
Q 020764 190 FECKVVGSFVRVKSDPNDYLQKNSHQLLQVIGTKKVPG-------TDD----KSTEILLKVSNFVKDIRIATLSDDNF 256 (321)
Q Consensus 190 Fe~~VvGcFVRI~ig~~~~t~~~~YRL~qV~Gv~~~~~-------~G~----~~Td~~L~v~~~~k~~~i~~~Sd~~F 256 (321)
-++..+||+|-|.++..=+ +|| ++|..|....- +|- .+-++.|.+.. .+++.|...++++.
T Consensus 6 ~~edwiG~~VSI~C~d~LG----VyQ-G~I~~V~~~~ItL~kaFrNGiplk~~~~EVtLsa~D-I~~L~IIe~~~~~~ 77 (103)
T 2rm4_A 6 TDQDWIGCAVSIACDEVLG----VFQ-GLIKQISAEEITIVRAFRNGVPLRKQNAEVVLKCTD-IRSIDLIEPAKQDL 77 (103)
T ss_dssp CSGGGTTCEEEEEECTTTC----EEE-EEEEEEETTEEEEEEEEETTEECSCSSSCEEEETTT-EEEEEEEECCCCCC
T ss_pred cccceeceEEEEeeCCcce----Eee-EEEEEcccceeEEhhhhhcCcCcCCCCceEEEEecc-hhheeeeccccccc
Confidence 3678999999999997754 677 55666653211 232 22223333322 35667777777665
Done!