Query 020767
Match_columns 321
No_of_seqs 197 out of 1404
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:53:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020767.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020767hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f6o_A Metacaspase-1; rossmann 100.0 2.9E-51 1E-55 384.5 21.9 295 3-315 49-349 (350)
2 4af8_A Metacaspase MCA2; hydro 100.0 1.3E-49 4.5E-54 375.0 23.5 259 3-318 88-358 (367)
3 3bij_A Uncharacterized protein 100.0 4.1E-46 1.4E-50 344.2 20.5 266 6-319 2-274 (285)
4 3uoa_B Mucosa-associated lymph 100.0 9.7E-30 3.3E-34 241.5 22.3 205 5-307 3-217 (390)
5 1m72_A Caspase-1; caspase, cys 99.8 4.2E-17 1.4E-21 148.8 20.0 210 5-307 30-259 (272)
6 1f1j_A Caspase-7 protease; cas 99.8 5.6E-17 1.9E-21 150.1 20.6 213 4-307 66-297 (305)
7 2j32_A Caspase-3; Pro-caspase3 99.8 3.4E-17 1.1E-21 147.9 18.2 209 4-307 13-241 (250)
8 2nn3_C Caspase-1; cysteine pro 99.7 9.6E-17 3.3E-21 148.7 19.8 210 5-307 58-287 (310)
9 3e4c_A Caspase-1; zymogen, inf 99.7 1.2E-16 4.2E-21 147.7 20.5 220 4-304 57-288 (302)
10 4ehd_A Caspase-3; caspase, apo 99.7 2.2E-16 7.7E-21 144.2 21.4 209 5-307 42-269 (277)
11 2fp3_A Caspase NC; apoptosis, 99.7 3.1E-16 1.1E-20 145.9 20.2 230 6-307 60-301 (316)
12 1nw9_B Caspase 9, apoptosis-re 99.7 8.7E-16 3E-20 140.7 22.4 242 4-307 18-268 (277)
13 3sir_A Caspase; hydrolase; 2.6 99.7 5.4E-17 1.8E-21 147.2 13.5 210 5-307 18-249 (259)
14 3od5_A Caspase-6; caspase doma 99.7 1.7E-15 6E-20 138.6 21.7 223 4-307 18-259 (278)
15 3h11_B Caspase-8; cell death, 99.7 1.8E-15 6.1E-20 138.0 20.9 219 5-307 15-254 (271)
16 2h54_A Caspase-1; allosteric s 99.6 5.6E-14 1.9E-18 120.2 14.7 119 5-148 41-170 (178)
17 3h11_A CAsp8 and FADD-like apo 99.1 1.8E-09 6.1E-14 98.2 14.3 209 5-307 41-263 (272)
18 1pyo_A Caspase-2; apoptosis, c 99.1 3.1E-09 1.1E-13 89.7 14.7 120 4-148 30-158 (167)
19 2dko_A Caspase-3; low barrier 98.9 1.2E-08 4.1E-13 84.2 13.2 118 5-148 14-139 (146)
20 1qtn_A Caspase-8; apoptosis, d 98.9 1.2E-08 4.1E-13 85.9 12.7 118 5-147 21-153 (164)
21 3p45_A Caspase-6; protease, hu 98.7 1.2E-07 4.2E-12 80.5 12.2 117 5-147 42-166 (179)
22 2ql9_A Caspase-7; cysteine pro 98.7 1.5E-07 5.2E-12 79.6 12.1 118 5-148 42-167 (173)
23 2ql9_B Caspase-7; cysteine pro 92.6 0.33 1.1E-05 36.4 6.7 70 232-307 9-89 (97)
24 2dko_B Caspase-3; low barrier 92.5 0.35 1.2E-05 36.8 6.7 71 231-307 14-95 (103)
25 1sc3_B Interleukin-1 beta conv 92.2 0.51 1.7E-05 34.8 7.1 67 232-304 7-74 (88)
26 2xzd_B Caspase-3; hydrolase-pr 91.8 0.46 1.6E-05 37.1 6.8 70 232-307 14-94 (118)
27 1pyo_B Caspase-2; apoptosis, c 91.7 0.51 1.7E-05 36.0 6.8 70 232-307 13-92 (105)
28 1qtn_B Caspase-8; apoptosis, d 90.1 0.72 2.5E-05 34.4 6.2 70 232-307 11-86 (95)
29 3rjm_B Caspase-2; caspase-2, c 85.6 3.6 0.00012 31.9 7.9 69 232-306 14-92 (117)
30 3euc_A Histidinol-phosphate am 62.4 40 0.0014 29.9 9.6 53 31-94 69-122 (367)
31 3ffh_A Histidinol-phosphate am 53.1 18 0.00061 32.3 5.5 52 30-92 68-119 (363)
32 7aat_A Aspartate aminotransfer 48.9 21 0.00073 32.3 5.3 52 33-91 79-133 (401)
33 2hd9_A UPF0310 protein PH1033; 44.8 13 0.00045 29.7 2.8 18 74-91 31-48 (145)
34 2r2n_A Kynurenine/alpha-aminoa 44.0 36 0.0012 31.2 6.2 102 31-147 84-203 (425)
35 2gbs_A Hypothetical protein RP 43.8 15 0.0005 29.5 2.8 19 72-90 37-55 (145)
36 1cvr_A Gingipain R, RGPB; casp 42.6 68 0.0023 30.3 7.8 73 7-95 142-215 (435)
37 1zce_A Hypothetical protein AT 42.4 16 0.00054 29.7 2.8 19 72-90 38-56 (155)
38 2ar1_A Hypothetical protein; s 41.3 18 0.0006 29.9 3.0 20 72-91 53-72 (172)
39 2eve_A Hypothetical protein ps 41.2 18 0.00062 29.4 3.0 19 72-90 35-53 (157)
40 1vp4_A Aminotransferase, putat 41.1 39 0.0013 31.0 5.9 51 32-93 92-145 (425)
41 2o1b_A Aminotransferase, class 40.1 1E+02 0.0034 27.9 8.5 30 119-149 198-227 (404)
42 1r4p_B Sltii B subunit, shiga- 39.9 10 0.00036 25.4 1.2 27 124-150 35-62 (70)
43 3aow_A Putative uncharacterize 39.0 63 0.0022 30.0 7.0 50 32-92 125-175 (448)
44 1c4q_A Protein (shiga-like tox 38.7 11 0.00038 25.3 1.1 27 124-150 36-63 (69)
45 3ly1_A Putative histidinol-pho 38.4 1.6E+02 0.0054 25.7 9.4 58 26-94 48-105 (354)
46 2zc0_A Alanine glyoxylate tran 37.2 62 0.0021 29.1 6.5 50 32-92 82-133 (407)
47 2zyj_A Alpha-aminodipate amino 36.8 46 0.0016 30.0 5.6 49 33-92 78-126 (397)
48 2p5d_A UPF0310 protein mjecl36 36.3 24 0.00083 28.1 3.1 16 74-90 34-49 (147)
49 3eop_A Thymocyte nuclear prote 35.9 24 0.00082 29.1 3.0 17 74-90 48-64 (176)
50 1zpw_X Hypothetical protein TT 33.8 50 0.0017 23.8 4.2 55 29-91 16-71 (90)
51 2i0x_A Hypothetical protein PF 31.8 1.4E+02 0.0047 21.2 6.7 52 31-90 14-66 (85)
52 3meb_A Aspartate aminotransfer 31.5 2E+02 0.0068 26.4 9.2 71 74-149 138-216 (448)
53 3uws_A Hypothetical protein; c 31.5 1.4E+02 0.0047 22.9 6.7 84 8-96 9-117 (126)
54 3f9t_A TDC, L-tyrosine decarbo 30.2 1.8E+02 0.006 25.5 8.3 56 31-94 71-136 (397)
55 4dq6_A Putative pyridoxal phos 29.6 87 0.003 27.8 6.1 55 28-93 70-126 (391)
56 3isl_A Purine catabolism prote 28.4 1.3E+02 0.0045 26.8 7.2 51 31-91 46-96 (416)
57 4es1_A BH0342 protein; ferredo 28.2 79 0.0027 23.4 4.5 58 30-95 23-81 (100)
58 2dr1_A PH1308 protein, 386AA l 27.0 2.9E+02 0.01 24.0 9.2 54 28-92 52-106 (386)
59 3fdb_A Beta C-S lyase, putativ 26.5 1.6E+02 0.0054 25.8 7.3 51 33-94 66-118 (377)
60 3ca8_A Protein YDCF; two domai 26.2 1.4E+02 0.0049 26.0 6.7 43 28-75 96-138 (266)
61 4gdk_A Ubiquitin-like protein 24.6 53 0.0018 23.9 2.9 54 31-90 32-86 (91)
62 3oq2_A Crispr-associated prote 24.3 82 0.0028 23.3 4.0 57 29-93 25-82 (103)
63 2pbq_A Molybdenum cofactor bio 24.3 1.1E+02 0.0036 24.9 5.1 71 1-86 1-74 (178)
64 1x3l_A Hypothetical protein PH 23.9 57 0.0019 31.0 3.7 45 47-94 89-135 (440)
65 3cq5_A Histidinol-phosphate am 22.9 2.2E+02 0.0077 24.9 7.6 51 33-94 77-129 (369)
66 3get_A Histidinol-phosphate am 21.5 1.8E+02 0.006 25.5 6.5 51 32-93 68-118 (365)
67 3nra_A Aspartate aminotransfer 21.5 2.2E+02 0.0075 25.2 7.3 50 33-93 86-138 (407)
68 3piu_A 1-aminocyclopropane-1-c 21.4 4E+02 0.014 23.9 9.2 54 31-95 92-149 (435)
69 3ele_A Amino transferase; RER0 21.4 1.9E+02 0.0066 25.6 6.9 52 31-93 82-136 (398)
70 2b8n_A Glycerate kinase, putat 21.2 60 0.002 30.7 3.2 76 8-94 50-139 (429)
71 3if2_A Aminotransferase; YP_26 21.2 1.6E+02 0.0054 26.7 6.3 43 29-82 87-131 (444)
72 3w1s_C Ubiquitin-like protein 21.1 57 0.002 23.8 2.5 52 31-90 35-86 (91)
73 3ijw_A Aminoglycoside N3-acety 20.1 88 0.003 27.5 4.0 26 62-89 15-40 (268)
No 1
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-51 Score=384.45 Aligned_cols=295 Identities=27% Similarity=0.397 Sum_probs=189.2
Q ss_pred CCCCcEEEEEEeecCCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCC-CCCCCcHHHHHHHHHHHHHhCCCC
Q 020767 3 TKGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPG-SSVMPTGANIKAALDRMVSKAEAG 81 (321)
Q Consensus 3 ~~~~~~~Al~IGi~y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~-~~~~~T~~~I~~~l~~l~~~~~~~ 81 (321)
.+.++++|||||||||+...+|++|+|||++|+++|++++||++++|++|+|.+. ....||+++|+++|+||+++++++
T Consensus 49 ~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pg 128 (350)
T 4f6o_A 49 QCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPN 128 (350)
T ss_dssp CCCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTT
T ss_pred CCCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999888999999999999999999889999999999999742 123479999999999999999999
Q ss_pred CEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCC---CCcHHHHHHHHH-hCCCCCeEEEEEeCCCCCcccccccccc
Q 020767 82 DVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFN---LITDLDFRQLVN-RLPKGASFTVFSDSCHSGGLIDKAKEQI 157 (321)
Q Consensus 82 D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~---~i~~~~l~~ll~-~l~~~~~v~~ilD~C~SG~~~~~~~~~~ 157 (321)
|++||||||||.+.++. +|+|.+|+|++|||+|++ .|.+++|.++|. .++++++|++||||||||++++.+....
T Consensus 129 D~llfYFSGHG~q~~d~-~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~l~~g~~vt~IlD~ChSGt~ldlp~~~~ 207 (350)
T 4f6o_A 129 DSLFLHYSGHGGQTEDL-DGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPLQQGVRLTALFDSCHSGTVLDLPYTYS 207 (350)
T ss_dssp CEEEEEEESCEEEC------------CEEECCTTHHHHCCEEHHHHHHHHTTTCCTTCEEEEEECSSSCTTTTCCSEEEE
T ss_pred CEEEEEEcCCceeccCC-CCCcccCCceEEEeccCCcCCcccHHHHHHHHHhhcCCCCeEEEEEccCCCCcccccccccc
Confidence 99999999999999887 788888999999999974 689999999874 5778899999999999999999875432
Q ss_pred CCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCCeE
Q 020767 158 GPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGI 237 (321)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (321)
....-+++ ..-+ +...+ ++..... +. .|. ...+...+..++.. .. +... .....+....|...+..+|
T Consensus 208 ~~g~~~e~-~~~~--~~~~~--~l~~~~~-~~--~g~-~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~vi 275 (350)
T 4f6o_A 208 TKGIIKEP-NIWK--DVGQD--GLQAAIS-YA--TGN-RAALIGSLGSIFKT-VK-GGMG-NNVDRERVRQIKFSAADVV 275 (350)
T ss_dssp TTEEEECC-CC--------------------------------------------------------------CCCSEEE
T ss_pred cccccCcc-hhhh--hcccc--ccchhhh-hc--ccc-chhhcccchhhhhh-hc-cccc-cccchhhhhhccCCCCCEE
Confidence 10000000 0000 00000 0000000 00 000 00000000000000 00 0000 0000001112456788999
Q ss_pred EEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCcccccccCc-cccCccc
Q 020767 238 LLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDE-NAAATFL 315 (321)
Q Consensus 238 ~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~~~~Q~P~l~~~~~-~~~~~f~ 315 (321)
+||||+++|+|.|... ++..+|+|||+|+++|+.++. +||.+|++.+|..|+. ++.|+|||+++.+ ..++.|+
T Consensus 276 ~~SgCkD~QtSaD~~~---~g~~~GAmTyafi~aL~~~p~-~tY~~Ll~~~r~~L~~-kysQ~PQLs~s~~~d~~~~f~ 349 (350)
T 4f6o_A 276 MLSGSKDNQTSADAVE---DGQNTGAMSHAFIKVMTLQPQ-QSYLSLLQNMRKELAG-KYSQKPQLSSSHPIDVNLQFI 349 (350)
T ss_dssp EEEEEC----------------CCCHHHHHHHHHHHHCCC-CBHHHHHHHHHHHHTT-TCSCEEEEEESSCCCTTSBCC
T ss_pred EEEecCCCCchhhhcc---CCceeehhHHHHHHHHHHCCC-CCHHHHHHHHHHHHHh-cCCCCceecccCCCCCCcccc
Confidence 9999999999999986 578899999999999999765 7999999999999986 6899999999987 7777775
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=100.00 E-value=1.3e-49 Score=374.99 Aligned_cols=259 Identities=32% Similarity=0.442 Sum_probs=203.9
Q ss_pred CCCCcEEEEEEeecCCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCC---CCCCCcHHHHHHHHHHHHHhCC
Q 020767 3 TKGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPG---SSVMPTGANIKAALDRMVSKAE 79 (321)
Q Consensus 3 ~~~~~~~Al~IGi~y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~---~~~~~T~~~I~~~l~~l~~~~~ 79 (321)
.+.++++||+||||||+...+|++|+|||++|+++|++ +||+.++|.+|+|.+. ....||++||+++|+||+++++
T Consensus 88 ~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~-~GF~~~~i~~L~D~~~~p~~~~~pTr~nI~~aL~~L~~~a~ 166 (367)
T 4af8_A 88 LPGQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQK-RGLPINEAVILVDEDNFPGRTDQPTRDNIVRYMAWLVKDAK 166 (367)
T ss_dssp CTTCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHH-TTCCCSEEEEEECCTTCTTCCBCCCHHHHHHHHHHHHHTCC
T ss_pred CCCCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHH-cCCCchheEEecccccccccccCCCHHHHHHHHHHHHHhCC
Confidence 36789999999999998889999999999999999975 8999999999998631 1235899999999999999999
Q ss_pred CCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCC---CCcHHHHHHH-HHhCCCCCeEEEEEeCCCCCcccccccc
Q 020767 80 AGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFN---LITDLDFRQL-VNRLPKGASFTVFSDSCHSGGLIDKAKE 155 (321)
Q Consensus 80 ~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~---~i~~~~l~~l-l~~l~~~~~v~~ilD~C~SG~~~~~~~~ 155 (321)
+||++||||||||.+.++. +++.+|+|++|+|+|++ .|.+++|.++ ++.+++++++++||||||||++.+.+..
T Consensus 167 pgD~l~fyFSGHG~q~~d~--~de~dg~De~LvP~D~~~~g~I~ddeL~~lLv~~l~~g~~v~vIlD~ChSGt~~dlp~~ 244 (367)
T 4af8_A 167 PGDVLFFHYSGHGTQCKSR--GDSDEKYDQCIAPVDFQKSGCIVDDDIHKLLFSRLPEKVRLTAVFDCGHSGSIMDLPFT 244 (367)
T ss_dssp TTCEEEEEEESCEEEECCC-------CCEEEECCTTHHHHCCEEHHHHHHHHTTTCCTTCEEEEEEECTTCCCCTTCSEE
T ss_pred CCCEEEEEEcCCcCccCCC--CCCCCCcceEEEeecCCcCCCccHHHHHHHHHHhccCCCEEEEEEeCCCCCcccccccc
Confidence 9999999999999999874 55667889999999964 6889999988 6888878999999999999999987643
Q ss_pred ccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCC
Q 020767 156 QIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDD 235 (321)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~ 235 (321)
+.. |..+... ... ... . .+ + ....+.+
T Consensus 245 ~~~------------------r~~~~~~---------~~~--~~~-~---------------~~-------~-~~~~~~~ 271 (367)
T 4af8_A 245 YVC------------------SGGEQAS---------GTP--HMK-R---------------IR-------E-GNDVLGD 271 (367)
T ss_dssp EEC------------------CTTCCTT---------SCC--CCE-E---------------CS-------S-CCCCCSE
T ss_pred ccc------------------ccccccc---------cch--hhh-h---------------hc-------c-CCCCCCC
Confidence 211 1000000 000 000 0 00 0 0134677
Q ss_pred eEEEeecCCCCcccccCCC----CCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCcccccccCc-cc
Q 020767 236 GILLSGCQANETSADMSPM----ESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDE-NA 310 (321)
Q Consensus 236 ~~~lsAc~~~e~A~E~~~~----~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~~~~Q~P~l~~~~~-~~ 310 (321)
+++||||+++|+|.|.... ++++..+|+|||+|+++|++++. +||.+|++++|..|++.++.|+||+.++.+ ..
T Consensus 272 vi~~Sac~d~QtSad~~~~~~f~~g~~~~~GafTyali~~L~~~~~-~Ty~~Ll~~vr~~l~~~g~~Q~PqLsss~~~d~ 350 (367)
T 4af8_A 272 VMMISGCADEQTSADVKNTATFGTGSTGAGGAATQCITCMLMNNQS-LSYGKLLIETRDMLKRKRFKQVPQLSASKAIDL 350 (367)
T ss_dssp EEEEEEECCCSCCCCCC-------CCCBCBSHHHHHHHHHHHCCSC-CBHHHHHHHHHHHHHHTTBSCEEEEEESSCBCT
T ss_pred EEEEEecCCCCchhhhhccccccccccCcccHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHhCCCCCceeccCCCCCC
Confidence 8999999999999997632 12357899999999999998765 799999999999999888999999999876 77
Q ss_pred cCccccCC
Q 020767 311 AATFLLQP 318 (321)
Q Consensus 311 ~~~f~~~~ 318 (321)
+.+|.-.+
T Consensus 351 ~~~F~l~~ 358 (367)
T 4af8_A 351 DQTFSLTE 358 (367)
T ss_dssp TSBCCSCC
T ss_pred CceeEecc
Confidence 78887554
No 3
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=100.00 E-value=4.1e-46 Score=344.19 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=195.9
Q ss_pred CcEEEEEEeecCC------CCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCC
Q 020767 6 SKRIAVLVGCNYP------NTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAE 79 (321)
Q Consensus 6 ~~~~Al~IGi~y~------~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~ 79 (321)
++++||+||||+| +..++|++|+|||+.|+++|++ +||+ |.+|.+.+ ||+++|+++|++|+.+++
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~-~Gf~---v~~l~~~~-----~t~~~i~~al~~l~~~~~ 72 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAE-RGFA---VTTLMTKA-----ATRAKVIDAIGKAAKALG 72 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHH-TTCE---EEEEEGGG-----CCHHHHHHHHHHHHHHCC
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHH-cCCc---eEEecCCc-----cCHHHHHHHHHHHHHhCC
Confidence 6899999999953 3457999999999999999964 8997 77787765 799999999999999999
Q ss_pred CCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhCCCCCeEEEEEeCCCCCccccc-cccccC
Q 020767 80 AGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDK-AKEQIG 158 (321)
Q Consensus 80 ~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l~~~~~v~~ilD~C~SG~~~~~-~~~~~~ 158 (321)
++|++||||||||.+.++. +|++.+++++||+|+|.. |.+++|..+|+.+++++++++||||||||++.+. +.....
T Consensus 73 ~~D~~~~yfSGHG~~~~~~-~g~e~dg~~~~l~p~D~~-i~~~~l~~~l~~l~~~~~~~vilD~C~SG~~~~~~p~~~~~ 150 (285)
T 3bij_A 73 KGDIFMLSYSGHGGQVPDT-SNDEPDGVDETWCLFDGE-LIDDELYALLGKFAAGVRVLVFSDSCHSGTVVKMAYYNGTT 150 (285)
T ss_dssp TTCEEEEEEESCEEEEECT-TSCCTTCEEEEEECSSSE-EEHHHHHHHHTTSCSSCEEEEEEECCCCCCHHHHHHTTC--
T ss_pred CCCEEEEEEcCCcccccCC-CCCccCCCcceEEecCCC-ccHHHHHHHHHhccCCCeEEEEEecCCCCcccccccccccc
Confidence 9999999999999998765 577778888999999975 6788999999999767899999999999999873 221000
Q ss_pred CCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCCeEE
Q 020767 159 PSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGIL 238 (321)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (321)
+.. . .....++.+.|++|.......+.... .+.+.+...++. ..+...+.++++
T Consensus 151 ~~~-~---~~~~~g~~~~r~~~~~~~~~~~~~~~-----~~~~~l~~~~~~-----------------~~~~~~~~~~i~ 204 (285)
T 3bij_A 151 AAR-S---AGPDEGEIRYRAMPQSVAMRTYRANR-----EFYDTIQQKTKK-----------------VDLADVKASILL 204 (285)
T ss_dssp ---------------CEESBCCHHHHHHHHHHTH-----HHHHHHHHHCCC-----------------CCTTTCSSEEEE
T ss_pred ccc-c---ccccccccceeecCchhhhhhhhcch-----hHHHHHhhhccc-----------------ccccCCCCCEEE
Confidence 000 0 00000112456666543222111100 000000000000 001234678999
Q ss_pred EeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCcccccccCccccCccccCC
Q 020767 239 LSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDENAAATFLLQP 318 (321)
Q Consensus 239 lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~~~~Q~P~l~~~~~~~~~~f~~~~ 318 (321)
||||+++|+|+|. ..+|+||++|+++|++.+..+||.+|+++|++.+ +..|+|++++++ ..+..||.|.
T Consensus 205 lsa~~~~q~A~e~-------~~~G~FT~aLl~~L~~~~~~~s~~~l~~~v~~~~---~~~Q~P~~~~~g-~~~~~Fl~~~ 273 (285)
T 3bij_A 205 ISGCQDNQLSQDG-------AFNGAFTGQLLRVWKNGLYKGSYRSFHKAIVRRM---PPDQTPNFFTAG-TPDPAFLKQR 273 (285)
T ss_dssp EESSCTTSCCEEC-------SSSCHHHHHHHHHHGGGTCCSCHHHHHHHHHHHS---CTTCCCEEEEEE-SCCHHHHHSC
T ss_pred EEeCCCCcccccc-------ccCCHHHHHHHHHHhhCCCCcCHHHHHHHHHHhc---CCCCCcceeCCC-CCCcccccCC
Confidence 9999999999985 3689999999999998776799999999998764 579999999864 6789999886
Q ss_pred C
Q 020767 319 A 319 (321)
Q Consensus 319 ~ 319 (321)
.
T Consensus 274 ~ 274 (285)
T 3bij_A 274 P 274 (285)
T ss_dssp T
T ss_pred c
Confidence 5
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=99.97 E-value=9.7e-30 Score=241.46 Aligned_cols=205 Identities=17% Similarity=0.204 Sum_probs=165.5
Q ss_pred CCcEEEEEEeecCCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEE
Q 020767 5 GSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVL 84 (321)
Q Consensus 5 ~~~~~Al~IGi~y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v 84 (321)
+++++||+|||+.|...++|++|++||++|+++|++ +||+ |.++.| +|+++|+++|+++.++++++|.+
T Consensus 3 A~~r~ALIIGn~~Y~~~~~L~ga~~DA~~L~~~L~~-lGF~---V~~l~D-------lT~~eI~~aL~~f~~~~~~~D~~ 71 (390)
T 3uoa_B 3 AKDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQ-LDFK---VVSLLD-------LTEYEMRNAVDEFLLLLDKGVYG 71 (390)
T ss_dssp BSCEEEEEEECCCCSSSCCCSTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHHTCCTTCEE
T ss_pred CCCCEEEEEEecCCCCcccCCChHHHHHHHHHHHHH-cCCe---EEEeec-------CCHHHHHHHHHHHHhhCCCCCEE
Confidence 578999999998666668999999999999999986 8997 777877 69999999999999999999999
Q ss_pred EEEeeCCCCccCCCCCCCCCCCCCceEEcCCCC-------CCcHHHHHHHHHhCCCCCeEEEEEeCCCCCcccccccccc
Q 020767 85 LFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFN-------LITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQI 157 (321)
Q Consensus 85 ~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~-------~i~~~~l~~ll~~l~~~~~v~~ilD~C~SG~~~~~~~~~~ 157 (321)
+|||||||.+..+ ..||+|.|.+ .++.++|.++++.++ ++..++||||||++...+..
T Consensus 72 l~yfsGHG~~~~g----------~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~~~-~K~kL~ILDACrg~~~~~~~---- 136 (390)
T 3uoa_B 72 LLYYAGHGYENFG----------NSFMVPVDAPNPYRSENCLCVQNILKLMQEKE-TGLNVFLLDMCRKRNDYDDT---- 136 (390)
T ss_dssp EEEEESCEEEETT----------EEEECCTTCCSSCCGGGSEEHHHHHHHHHHTT-CSEEEEEEESCCCCCTTCCC----
T ss_pred EEEEecCccccCC----------cceEEecCCCccccccceeeHHHHHHHHHhcC-CCceEEEEECCCCCCccccc----
Confidence 9999999988642 4799999985 367788888888875 55789999999996432210
Q ss_pred CCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCCeE
Q 020767 158 GPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGI 237 (321)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (321)
++ +... .....+.+
T Consensus 137 ---------------------~~------------~~~~---------------------------------ip~~ad~L 150 (390)
T 3uoa_B 137 ---------------------IP------------ILDA---------------------------------LKVTANIV 150 (390)
T ss_dssp ---------------------CC------------CCCC---------------------------------CCCCSCEE
T ss_pred ---------------------cc------------cccc---------------------------------CcccCCcE
Confidence 00 0000 11346788
Q ss_pred EEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH---hCCCCCcccccccC
Q 020767 238 LLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILK---EQRFEQHPCLYCSD 307 (321)
Q Consensus 238 ~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~---~~~~~Q~P~l~~~~ 307 (321)
++.||.+++.|+|... ++..+|+||++|+++|++ ..+..+|+.+|+..|. ..+.+|.|++.+..
T Consensus 151 i~yAT~pG~~A~r~~~---d~~~gS~FtqaL~e~L~~---~~dl~~LLt~Vn~~Va~~~~~~~KQ~P~~~StL 217 (390)
T 3uoa_B 151 FGYATCQGAEAFEIQH---SGLANGIFMKFLKDRLLE---DKKITVLLDEVAEDMGKCHLTKGKQALEIRSSL 217 (390)
T ss_dssp EEESSCTTCCCEECSS---CTTCCCHHHHHHTTTTTC---SSCHHHHHHHHHHHHTTCTTTTTTCCCEEEECC
T ss_pred EEEEcCCCcEeeecCC---CCCCCCHHHHHHHHHHcc---CCCHHHHHHHHHHHHhhccccCCcccCccceee
Confidence 8899999999999642 246789999999999987 3789999999999995 24678999998654
No 5
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=99.76 E-value=4.2e-17 Score=148.84 Aligned_cols=210 Identities=13% Similarity=0.147 Sum_probs=151.1
Q ss_pred CCcEEEEEEeec-CCC-CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh-CCCC
Q 020767 5 GSKRIAVLVGCN-YPN-TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK-AEAG 81 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~-~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~-~~~~ 81 (321)
.+++.|||||+. |.. ...++.|+.+|++.|+++|++ +||. |.+..| .|..+|+++|+++.++ ....
T Consensus 30 ~~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~~~~~dh~~~ 98 (272)
T 1m72_A 30 KHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKT-LGFK---VTVFPN-------LKSEEINKFIQQTAEMDHSDA 98 (272)
T ss_dssp SEEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHTSCCTTE
T ss_pred CCCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHH-CCCE---EEEecC-------cCHHHHHHHHHHHHHhhcCCC
Confidence 458899999996 543 368999999999999999986 8997 777777 6999999999999875 4678
Q ss_pred CEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHh-----CCCCCeEEEEEeCCCCCccccccccc
Q 020767 82 DVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNR-----LPKGASFTVFSDSCHSGGLIDKAKEQ 156 (321)
Q Consensus 82 D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~-----l~~~~~v~~ilD~C~SG~~~~~~~~~ 156 (321)
|.++|||.|||.. .++++.|.. +..++|...+.. + .++-.++|+|+|+...+.++..
T Consensus 99 d~~v~~~lsHG~~--------------~~i~~~D~~-v~l~~i~~~f~~~~cpsL-~gKPKlffiqACRg~~~~~g~~-- 160 (272)
T 1m72_A 99 DCLLVAVLTHGEL--------------GMLYAKDTH-YKPDNLWYYFTADKCPTL-AGKPKLFFIQACQGDRLDGGIT-- 160 (272)
T ss_dssp EEEEEEEESCEET--------------TEEECSSSE-ECTTHHHHTTSTTTCGGG-TTSCEEEEEESCSSSBCBCCEE--
T ss_pred CEEEEEEcCCCCC--------------CEEEecCCc-EEHHHHHHHhccccChhh-cCCceEEEEeCCCCCcccCCcc--
Confidence 9999999999962 478898874 444556555532 2 2444689999998433311100
Q ss_pred cCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCCe
Q 020767 157 IGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDG 236 (321)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (321)
.. + +..+ +.. + ...+ .....+.
T Consensus 161 -----------------~~-~-~~~d----------~~~--------------~--~~~~-------------iP~~aD~ 182 (272)
T 1m72_A 161 -----------------LS-R-TETD----------GSP--------------S--TSYR-------------IPVHADF 182 (272)
T ss_dssp -----------------EE-C------------------------------------CEE-------------ECTTCSE
T ss_pred -----------------cc-c-cccc----------ccc--------------c--cccc-------------cCCCCCE
Confidence 00 0 0000 000 0 0000 1234678
Q ss_pred EEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh------------CCCCCccccc
Q 020767 237 ILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE------------QRFEQHPCLY 304 (321)
Q Consensus 237 ~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~------------~~~~Q~P~l~ 304 (321)
++..|+.++..||... ..++.|+.+|++.|++.+......+|+.+|+..|.. .+.+|.|++.
T Consensus 183 Li~ysT~pG~vs~r~~------~~GS~fiq~L~~~l~~~~~~~dl~~ilt~V~~~V~~~~~s~~~~~~~~~~~kQ~P~~~ 256 (272)
T 1m72_A 183 LIAFSTVPGYFSWRNT------TRGSWFMQALCEELRYAGTERDILTLLTFVCQKVALDFESNAPDSAMMHQQKQVPCIT 256 (272)
T ss_dssp EEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCCCCTTCGGGTTCBCCCEEE
T ss_pred EEEEeCCCCcEeecCC------CCCCHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhcccccccccCCceEcceee
Confidence 8888889999999854 467999999999999865457899999999998863 3568999998
Q ss_pred ccC
Q 020767 305 CSD 307 (321)
Q Consensus 305 ~~~ 307 (321)
+..
T Consensus 257 stL 259 (272)
T 1m72_A 257 SML 259 (272)
T ss_dssp ECC
T ss_pred eec
Confidence 764
No 6
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=99.76 E-value=5.6e-17 Score=150.10 Aligned_cols=213 Identities=15% Similarity=0.163 Sum_probs=151.5
Q ss_pred CCCcEEEEEEeec-CCCC--CCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhC-C
Q 020767 4 KGSKRIAVLVGCN-YPNT--KNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKA-E 79 (321)
Q Consensus 4 ~~~~~~Al~IGi~-y~~~--~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~-~ 79 (321)
..++++|||||+. |... ..++.|+.+|++.|+++|++ +||. |.+..| .|+.+|+++|+++.... .
T Consensus 66 ~~~rg~aLIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~~~~~~h~ 134 (305)
T 1f1j_A 66 FEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRS-LGFD---VIVYND-------CSCAKMQDLLKKASEEDHT 134 (305)
T ss_dssp SSEEEEEEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHH-HTEE---EEEEES-------CCHHHHHHHHHHHHHSCGG
T ss_pred CCCCCEEEEEechhcCCCccCccCCCcHHHHHHHHHHHHH-CCCE---EEEecC-------cCHHHHHHHHHHHHHhhcC
Confidence 3478899999996 5432 46778999999999999985 8997 777777 69999999999988763 5
Q ss_pred CCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhCC----CCCeEEEEEeCCCCCcccccccc
Q 020767 80 AGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLP----KGASFTVFSDSCHSGGLIDKAKE 155 (321)
Q Consensus 80 ~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l~----~~~~v~~ilD~C~SG~~~~~~~~ 155 (321)
..|.++|||.|||.. .++++.|. .+..++|...+.... .++-.++|||+|+...+.+...
T Consensus 135 ~~d~~vv~ilsHG~~--------------~~i~g~D~-~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~~- 198 (305)
T 1f1j_A 135 NAACFACILLSHGEE--------------NVIYGKDG-VTPIKDLTAHFRGDRSKTLLEKPKLFFIQACRGTELDDGIQ- 198 (305)
T ss_dssp GEEEEEEEEESCEET--------------TEEECSSS-EEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCCBC-
T ss_pred CCCEEEEEEecCCCC--------------CeEEecCC-eEEHHHHHHHhhhccChhhcCCceEEEeccccCCcccCCcc-
Confidence 679999999999985 37888886 455566655543211 2445689999998655322110
Q ss_pred ccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCC
Q 020767 156 QIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDD 235 (321)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~ 235 (321)
. ..-+... . ++.+..+ .....+
T Consensus 199 ---~-----------------~~~~~~~----------~---------------~~~~~~~-------------ip~~aD 220 (305)
T 1f1j_A 199 ---A-----------------DSGPIND----------T---------------DANPRYK-------------IPVEAD 220 (305)
T ss_dssp ------------------------------------------------------------C-------------BCTTTT
T ss_pred ---c-----------------cCCcccc----------c---------------ccccccc-------------cCCCCC
Confidence 0 0000000 0 0000000 124567
Q ss_pred eEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh-----------CCCCCccccc
Q 020767 236 GILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE-----------QRFEQHPCLY 304 (321)
Q Consensus 236 ~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~-----------~~~~Q~P~l~ 304 (321)
.++..|+.++..||... ..++.|+.+|++.|++.+......+|+.+|+..|.. .+.+|.|++.
T Consensus 221 ~LiayST~pG~vs~r~~------~~GS~FiqaL~~~l~~~~~~~dl~~ilt~Vn~~V~~~~~~~~~~~~~~~~kQ~P~~~ 294 (305)
T 1f1j_A 221 FLFAYSTVPGYYSWRSP------GRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVV 294 (305)
T ss_dssp EEEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCCCCSSGGGSSCBCCCEEE
T ss_pred EEEEEECCCCeeccCCC------CCCCHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhccccccccCCceECceee
Confidence 88888889999999753 467899999999999865557899999999998864 3568999998
Q ss_pred ccC
Q 020767 305 CSD 307 (321)
Q Consensus 305 ~~~ 307 (321)
+..
T Consensus 295 ssL 297 (305)
T 1f1j_A 295 SML 297 (305)
T ss_dssp ECC
T ss_pred eec
Confidence 754
No 7
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=99.75 E-value=3.4e-17 Score=147.87 Aligned_cols=209 Identities=12% Similarity=0.117 Sum_probs=151.1
Q ss_pred CCCcEEEEEEeec-CCC--CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhC-C
Q 020767 4 KGSKRIAVLVGCN-YPN--TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKA-E 79 (321)
Q Consensus 4 ~~~~~~Al~IGi~-y~~--~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~-~ 79 (321)
..+++.|||||+. |.. ...++.|+.+|++.|+++|++ +||. |.+..| .|..+|+++|+++.++. +
T Consensus 13 ~~~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~-LgF~---V~~~~d-------lt~~em~~~l~~~~~~~~~ 81 (250)
T 2j32_A 13 YPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRN-LKYE---VRNKND-------LTREEIVELMRDVSKEDHS 81 (250)
T ss_dssp SSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHTSCCT
T ss_pred CCCccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHH-CCCE---EEEEeC-------CCHHHHHHHHHHHHHhhcc
Confidence 3568899999996 543 257999999999999999985 8997 777777 69999999999998874 6
Q ss_pred CCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHh-----CCCCCeEEEEEeCCCCCccccccc
Q 020767 80 AGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNR-----LPKGASFTVFSDSCHSGGLIDKAK 154 (321)
Q Consensus 80 ~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~-----l~~~~~v~~ilD~C~SG~~~~~~~ 154 (321)
..|.++|||.|||.. ..+.+.|. .++.++|...+.. + .++-.++|+|+|+...+.+.
T Consensus 82 ~~d~~v~~~lsHG~~--------------g~i~~~D~-~v~l~~i~~~f~~~~cp~L-~gKPKlf~iqACRg~~~~~g-- 143 (250)
T 2j32_A 82 KRSSFVCVLLSHGEE--------------GIIFGTNG-PVDLKKITNFFRGDRCRSL-TGKPKLFIIQACRGTELDCG-- 143 (250)
T ss_dssp TEEEEEEEEESCEET--------------TEEEETTE-EEEHHHHHHTTSTTTCGGG-TTSCEEEEEESCSEEECBCC--
T ss_pred CCCEEEEEECCCCCC--------------CeEEecCC-cEEHHHHHHHhccccChhH-cCCCeEEEEecccCCcccCC--
Confidence 679999999999983 24567776 5566666665544 3 24445899999974332111
Q ss_pred cccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCC
Q 020767 155 EQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPD 234 (321)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~ 234 (321)
- ......+ .+.. .. ......
T Consensus 144 ----~--------------------~~~~~~~-----~~~~------------------~~-------------~ip~~a 163 (250)
T 2j32_A 144 ----I--------------------ATDSGVD-----DDMA------------------CH-------------KIPVEA 163 (250)
T ss_dssp ----C--------------------CC---------------------------------C-------------CCCTTT
T ss_pred ----c--------------------cccCCcc-----cccc------------------cc-------------ccCCCC
Confidence 0 0000000 0000 00 012456
Q ss_pred CeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh-----------CCCCCcccc
Q 020767 235 DGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE-----------QRFEQHPCL 303 (321)
Q Consensus 235 ~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~-----------~~~~Q~P~l 303 (321)
+.++..|+.++..||... ..++.|+.+|++.|++........+++.+|+..|.. .+.+|.|++
T Consensus 164 D~Li~ysT~pG~vs~r~~------~~gS~fiq~L~~~l~~~~~~~dl~~ilt~V~~~V~~~~~~~~~~~~~~~~kQ~P~~ 237 (250)
T 2j32_A 164 DFLYAYSTAPGYYSWRNS------KDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQIPCI 237 (250)
T ss_dssp TEEEEESSCTEECCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCCCCSSTTTTTCBCCCEE
T ss_pred CEEEEEeCCCccEEecCC------CCCcHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhccccCCcCCCCceEccEe
Confidence 788888889999999854 468999999999999854447899999999988864 356899999
Q ss_pred cccC
Q 020767 304 YCSD 307 (321)
Q Consensus 304 ~~~~ 307 (321)
.+..
T Consensus 238 ~ssL 241 (250)
T 2j32_A 238 VSML 241 (250)
T ss_dssp EECC
T ss_pred eeec
Confidence 9764
No 8
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=99.74 E-value=9.6e-17 Score=148.68 Aligned_cols=210 Identities=12% Similarity=0.128 Sum_probs=151.6
Q ss_pred CCcEEEEEEeec-CCC-CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh-CCCC
Q 020767 5 GSKRIAVLVGCN-YPN-TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK-AEAG 81 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~-~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~-~~~~ 81 (321)
.+++.||||++. |.. ...++.|+.+|++.|+++|++ +||. |.+..| .|..+|+++|+++.++ ....
T Consensus 58 ~~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~f~~~dh~~~ 126 (310)
T 2nn3_C 58 KHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKT-LGFK---VTVFPN-------LKSEEINKFIQQTAEMDHSDA 126 (310)
T ss_dssp SBCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHSSCGGGB
T ss_pred CCcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHH-CCCE---EEEecC-------CCHHHHHHHHHHHHHhccCCC
Confidence 458899999996 543 468899999999999999986 8997 777777 6999999999999875 4678
Q ss_pred CEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHh-----CCCCCeEEEEEeCCCCCccccccccc
Q 020767 82 DVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNR-----LPKGASFTVFSDSCHSGGLIDKAKEQ 156 (321)
Q Consensus 82 D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~-----l~~~~~v~~ilD~C~SG~~~~~~~~~ 156 (321)
|.++|||.|||.. .++++.|.. +..++|...+.. + .++-.++|||+|+...+.++.
T Consensus 127 D~~vv~ilSHG~~--------------g~i~g~D~~-v~l~~I~~~f~~~~CpsL-~gKPKlffiQACRG~~~d~g~--- 187 (310)
T 2nn3_C 127 DCLLVAVLTAGEL--------------GMLYAKDTH-YKPDNLWYYFTADKCPTL-AGKPKLFFIQACQGDRLDGGI--- 187 (310)
T ss_dssp SCEEEEEEEEEET--------------TEEECSSCE-ECTHHHHGGGSTTTCGGG-TTSCEEEEEEEECCCCCCCCC---
T ss_pred CEEEEEEeCCCCC--------------CEEEecCCc-EEHHHHHHHhccccChhh-cCCceEEEEecccCCccccCc---
Confidence 9999999999962 488899874 455555555532 2 244568999999854332110
Q ss_pred cCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCCe
Q 020767 157 IGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDG 236 (321)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (321)
. .. + +..+ +.. + ... ......+.
T Consensus 188 ---~-------------~~-~-~~~d----------~~~--------------~--~~~-------------~iP~~aD~ 210 (310)
T 2nn3_C 188 ---T-------------LS-R-TETD----------GSP--------------S--TSY-------------RIPVHADF 210 (310)
T ss_dssp ---------------------------------------------------------CC-------------CCCCSTTE
T ss_pred ---c-------------cc-c-cccc----------ccc--------------c--ccc-------------ccCCCCCE
Confidence 0 00 0 0000 000 0 000 01234678
Q ss_pred EEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh------------CCCCCccccc
Q 020767 237 ILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE------------QRFEQHPCLY 304 (321)
Q Consensus 237 ~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~------------~~~~Q~P~l~ 304 (321)
++..|+.++..||... ..++.|+.+|++.|++.+......+|+.+|+..|.. .+.+|.|++.
T Consensus 211 LiayST~pG~vS~R~~------~~GSwFIqaL~~~l~~~~~~~dl~~ilt~Vn~~V~~~~~s~~p~~~~~~~~kQ~P~~~ 284 (310)
T 2nn3_C 211 LIAFSTVPGYFSWRNT------TRGSWFMQALCEELRYAGTERDILTLLTFVCQKVALDFESNAPDSAMMHQQKQVPCIT 284 (310)
T ss_dssp EEEECCCCCEEESSSS------EEEEHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHTTSSSCCSSCSCCSCCCCEEE
T ss_pred EEEEeCCCCceeecCC------CCCCHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhcccccccccCCceEcceee
Confidence 8888889999999753 467999999999999865557899999999998863 3568999998
Q ss_pred ccC
Q 020767 305 CSD 307 (321)
Q Consensus 305 ~~~ 307 (321)
+..
T Consensus 285 stL 287 (310)
T 2nn3_C 285 SML 287 (310)
T ss_dssp ECC
T ss_pred eec
Confidence 764
No 9
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=99.74 E-value=1.2e-16 Score=147.66 Aligned_cols=220 Identities=14% Similarity=0.153 Sum_probs=151.4
Q ss_pred CCCcEEEEEEeecCCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHH--hCCCC
Q 020767 4 KGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVS--KAEAG 81 (321)
Q Consensus 4 ~~~~~~Al~IGi~y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~--~~~~~ 81 (321)
+..++.|||||+..|....++.|+.+|++.|.++|++ +||. |.+..| .|..+|.++|+++.. ..+..
T Consensus 57 ~~~~r~aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~f~~~~dh~~~ 125 (302)
T 3e4c_A 57 SSRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQN-LGYS---VDVKKN-------LTASDMTTELEAFAHRPEHKTS 125 (302)
T ss_dssp TTCCCEEEEEECCSCSSSCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHTCGGGGGC
T ss_pred CCCccEEEEEECcCCCCCCCCCCcHHHHHHHHHHHHH-CCCE---EEEeeC-------CCHHHHHHHHHHHHhhhccCCC
Confidence 3468899999997555678999999999999999986 8997 777777 699999999999986 35678
Q ss_pred CEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCC-----CCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCccccc
Q 020767 82 DVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDF-----NLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGGLIDK 152 (321)
Q Consensus 82 D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~-----~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~~~~~ 152 (321)
|.++|||.|||.+. ++++.|. ..+..++|...+..- + .++-.++|+|+|+....-..
T Consensus 126 d~~vv~~lsHG~~~--------------~i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL~gKPKlffIQACRG~~~~~~ 191 (302)
T 3e4c_A 126 DSTFLVFMSHGIRE--------------GICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQAARGDSPGVV 191 (302)
T ss_dssp SCEEEEEEEEEETT--------------EEECTTCCSSSCCEECHHHHHHHTSTTTCGGGTTSCEEEEEEEECSSSCCCC
T ss_pred CEEEEEEeccCcCC--------------eEEeecccccCCcEEEHHHHHHHHhhhcchhhcCCccEEEEECCCCCCCCcc
Confidence 99999999999872 4566664 346666776666531 1 34456899999986543110
Q ss_pred cccccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCC
Q 020767 153 AKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLK 232 (321)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~ 232 (321)
. ..+. ... ...+.. .....+ ..++. . +...
T Consensus 192 ~----~~ds----~~~-----~~~~~~--------------~~~~~~--------~~d~~--~-------------~ip~ 221 (302)
T 3e4c_A 192 W----FKDS----VGV-----SGNLSL--------------PTTEEF--------EDDAI--K-------------KAHI 221 (302)
T ss_dssp C----CCCC-----------------C--------------CCCCCC--------CCHHH--H-------------TSCS
T ss_pred e----eccC----ccc-----cccccc--------------cccccc--------ccccc--c-------------ccCC
Confidence 0 0000 000 000000 000000 00000 0 0224
Q ss_pred CCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh-CCCCCccccc
Q 020767 233 PDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE-QRFEQHPCLY 304 (321)
Q Consensus 233 ~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~-~~~~Q~P~l~ 304 (321)
..+.++..|+.++..||... ..++.|+.+|++.|++........+++.+|+..|.. .+.+|.|++.
T Consensus 222 ~aDfLi~yST~pG~vS~R~~------~~GSwFIqaL~~~l~~~~~~~dl~~il~~V~~~v~~~~~~kQ~P~~~ 288 (302)
T 3e4c_A 222 EKDFIAFCSSTPDNVSWRHP------TMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMPTTE 288 (302)
T ss_dssp SCSEEEEEECCCCCCCSSST------TCCCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTSSCCSSCCCCEEE
T ss_pred CCCEEEEEeCCCCceeecCC------CCCcHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhCCCCceeeeeee
Confidence 56788888999999999754 456899999999998854447899999999998875 3668999997
No 10
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=99.74 E-value=2.2e-16 Score=144.23 Aligned_cols=209 Identities=11% Similarity=0.093 Sum_probs=151.9
Q ss_pred CCcEEEEEEeec-CCC--CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh-CCC
Q 020767 5 GSKRIAVLVGCN-YPN--TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK-AEA 80 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~--~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~-~~~ 80 (321)
.+++.||||++. |.. ...++.|+.+|++.|.++|+. +||. |.+..| .|..+|.++|+++.+. ...
T Consensus 42 ~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~f~~~dh~~ 110 (277)
T 4ehd_A 42 PEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRN-LKYE---VRNKND-------LTREEIVELMRDVSKEDHSK 110 (277)
T ss_dssp SEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHTSCCTT
T ss_pred CCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHH-CCCE---EEEecC-------CCHHHHHHHHHHHHhhcccC
Confidence 578999999996 543 357889999999999999986 8997 777777 6999999999999875 567
Q ss_pred CCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCccccccccc
Q 020767 81 GDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGGLIDKAKEQ 156 (321)
Q Consensus 81 ~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~~~~~~~~~ 156 (321)
.|.++|+|.|||.+ .++++.|. .+..++|...+..- + .++-.++|+|+|+...+.+..
T Consensus 111 ~d~~vv~ilSHG~~--------------g~i~g~D~-~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~--- 172 (277)
T 4ehd_A 111 RSSFVCVLLSHGEE--------------GIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGI--- 172 (277)
T ss_dssp EEEEEEEEESCEET--------------TEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCCC---
T ss_pred CCEEEEEEEcCCCC--------------CEEEEeCC-cEeHHHHHHHhhhccCchhcCCccEEEEecCCCCcccCCc---
Confidence 89999999999986 27888887 35666666555421 1 244568999999754322110
Q ss_pred cCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCCe
Q 020767 157 IGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDG 236 (321)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (321)
.....+. .+ .. .. ......+.
T Consensus 173 ------------------~~~~~~~----------~~-----------------~~-~~-------------~ip~~aD~ 193 (277)
T 4ehd_A 173 ------------------ETDSGVD----------DD-----------------MA-CH-------------KIPVEADF 193 (277)
T ss_dssp ------------------CC--------------------------------------C-------------CCCTTTTE
T ss_pred ------------------cccCCcc----------cc-----------------cc-cc-------------ccCCCCCE
Confidence 0000000 00 00 00 02245678
Q ss_pred EEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh-----------CCCCCcccccc
Q 020767 237 ILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE-----------QRFEQHPCLYC 305 (321)
Q Consensus 237 ~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~-----------~~~~Q~P~l~~ 305 (321)
++..|+.++..||... ..++.|+.+|++.|++........+|+..|+..|.. .+.+|.|++.+
T Consensus 194 Li~yST~pG~vs~r~~------~~GS~fIq~L~~~l~~~~~~~dl~~ilt~V~~~V~~~~es~~~~~~~~~~kQ~P~~~s 267 (277)
T 4ehd_A 194 LYACSTAPGYYSWRNS------KDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQIPCIVS 267 (277)
T ss_dssp EEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCCCCSSGGGTTCBCCCEEEE
T ss_pred EEEEECCCCeEeecCC------CCCcHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhccCCCCcCCceEeeEEEE
Confidence 8888889999999754 457999999999998854447899999999998863 35679999987
Q ss_pred cC
Q 020767 306 SD 307 (321)
Q Consensus 306 ~~ 307 (321)
..
T Consensus 268 tL 269 (277)
T 4ehd_A 268 ML 269 (277)
T ss_dssp CC
T ss_pred ec
Confidence 54
No 11
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=99.72 E-value=3.1e-16 Score=145.90 Aligned_cols=230 Identities=10% Similarity=0.067 Sum_probs=152.1
Q ss_pred CcEEEEEEeec-CCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhC-C-CCC
Q 020767 6 SKRIAVLVGCN-YPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKA-E-AGD 82 (321)
Q Consensus 6 ~~~~Al~IGi~-y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~-~-~~D 82 (321)
+++.||||++. |.....++.|+.+|++.|+++|++ +||. |.+..| .|..+|+++|+++.++. . ..|
T Consensus 60 ~rg~aLIInN~~F~~~~~~R~Gt~~D~~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~f~~~~h~~~~D 128 (316)
T 2fp3_A 60 NRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQE-LNFT---IFPYGN-------VNQDQFFKLLTMVTSSSYVQNTE 128 (316)
T ss_dssp CSEEEEEEECCCCSSTTSCCTTHHHHHHHHHHHHHH-TTEE---EEEECS-------CCHHHHHHHHHHHHTSHHHHTCS
T ss_pred CCcEEEEEeCcccCCCCCCCCCcHHHHHHHHHHHHH-CCCE---EEEccC-------CCHHHHHHHHHHHHHHhhcCCCC
Confidence 88999999996 553127899999999999999985 8997 677766 69999999999998765 3 789
Q ss_pred EEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCccccccccccC
Q 020767 83 VLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGGLIDKAKEQIG 158 (321)
Q Consensus 83 ~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~~~~~~~~~~~ 158 (321)
.++|+|.|||.+... ..++++.|...+..++|...+..- + .++-.++|+|+|+....-++.. ..
T Consensus 129 ~~vv~ilSHG~~~~g----------~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~d~g~~--~~ 196 (316)
T 2fp3_A 129 CFVMVLMTHGNSVEG----------KEKVEFRDGSVVDMQKIKDHFQTAKCPYLVNKPKVLMFPFARGDEYDLGHP--KN 196 (316)
T ss_dssp CEEEEEESCEECCTT----------CCEEECTTSCEEEHHHHHHTTSTTTCGGGTTSCEEEEESCC--------------
T ss_pred EEEEEEccCCCccCC----------CCEEEeecCcEEeHHHHHHHhccccChhhcCCceEEEEecCCCCcccCCce--ec
Confidence 999999999988642 468999998767777777666431 1 3455689999998544321110 00
Q ss_pred CCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCch-hhhhhcCccchhhhhhccCCCCCCeE
Q 020767 159 PSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDA-SLRFRLAPNEVMDLFESWSLKPDDGI 237 (321)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (321)
... + ..+ ..|... ..+. +. ...++ .... ......+.+
T Consensus 197 ~~~-----~------~~~-~~~~~~---------~~~~-~~-------~~~d~~~~~~-------------~iP~~aD~L 234 (316)
T 2fp3_A 197 QGN-----L------MEP-VYTAQE---------EKWP-DT-------QTEGIPSPST-------------NVPSLADTL 234 (316)
T ss_dssp --------------------------------------------------------CC-------------CCCCCCSEE
T ss_pred cCc-----c------ccc-cccccc---------cccc-cc-------cccccccccc-------------ccCCCCCEE
Confidence 000 0 000 000000 0000 00 00000 0000 123457888
Q ss_pred EEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhC----CCCCcccccccC
Q 020767 238 LLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQ----RFEQHPCLYCSD 307 (321)
Q Consensus 238 ~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~----~~~Q~P~l~~~~ 307 (321)
+..|+.++..||... ..++.|+.+|++.|++........+|+.+|+..|... +..| |++.+..
T Consensus 235 i~yST~pG~vS~R~~------~~GSwFIq~L~~~l~~~~~~~dl~~ilt~Vn~~V~~~~~~~~~kQ-P~~~stL 301 (316)
T 2fp3_A 235 VCYANTPGYVTHRDL------DTGSWYIQKFCQVMADHAHDTDLEDILKKTSEAVGNKRTKKGSMQ-TGAYDNL 301 (316)
T ss_dssp EEECCCSCCCBTTTB------CHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHSSSSSCSSSC-CCEEEEE
T ss_pred EEEeCCCCceeccCC------CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHhhccCCCcc-ceEEeEc
Confidence 888999999999753 4678999999999998544478999999999999753 3469 9998655
No 12
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=99.72 E-value=8.7e-16 Score=140.66 Aligned_cols=242 Identities=16% Similarity=0.135 Sum_probs=155.1
Q ss_pred CCCcEEEEEEeec-CCC--CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhC-C
Q 020767 4 KGSKRIAVLVGCN-YPN--TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKA-E 79 (321)
Q Consensus 4 ~~~~~~Al~IGi~-y~~--~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~-~ 79 (321)
..++.+||||++. |.. ...++.|+.+|++.|+++|+. +||. |.+..| .|..+|+++|+++.++. .
T Consensus 18 ~~~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~-LgF~---V~~~~d-------lt~~em~~~l~~~~~~~h~ 86 (277)
T 1nw9_B 18 MEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSS-LHFM---VEVKGD-------LTAKKMVLALLELARQDHG 86 (277)
T ss_dssp CSSCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHH-TTEE---EEEEES-------CCHHHHHHHHHHHHHSCCT
T ss_pred CCcccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHH-CCCE---EEEEcC-------CCHHHHHHHHHHHHHhhcc
Confidence 3578899999996 543 357899999999999999985 8997 777777 69999999999998764 5
Q ss_pred CCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCcccccccc
Q 020767 80 AGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGGLIDKAKE 155 (321)
Q Consensus 80 ~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~~~~~~~~ 155 (321)
..|.++|+|.|||.+.... ..+..+.+.|...+..++|...+..- + .++-.++|+|+|+....-++...
T Consensus 87 ~~D~~vv~ilSHG~~~~~~-------~~~g~iy~~D~~~v~l~~i~~~f~~~~CpsL~gKPKlffiQACRG~~~d~g~~~ 159 (277)
T 1nw9_B 87 ALDCCVVVILSHGCQASHL-------QFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEV 159 (277)
T ss_dssp TCSEEEEEEEEEEECCCCS-------SSCCEEECTTSCEEEHHHHHHTTCTTTCGGGTTSCEEEEEEEEC----------
T ss_pred cCCeEEEEEeCCCCccccc-------cCCCcEEecCCceeeHHHHHHHhcccCChhHcCCCcEEEEeccCCCcccCCcee
Confidence 6799999999999875321 11357778887767777776666421 1 34456899999975443211100
Q ss_pred ccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCC
Q 020767 156 QIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDD 235 (321)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~ 235 (321)
......+.... ........|... +.. .+...++ . .......+
T Consensus 160 --~~~~~~~~~~~---~~~~~~~~~~~~---------~~~---------~~~~~~~--~-------------~~ip~~aD 201 (277)
T 1nw9_B 160 --ASTSPEDESPG---SNPEPDATPFQE---------GLR---------TFDQLDA--I-------------SSLPTPSD 201 (277)
T ss_dssp ----------------------CBCCC---------------------------------------------CCCCCSCS
T ss_pred --ccCCccccccc---cccccccccccc---------ccc---------ccccccc--c-------------cccCCCCC
Confidence 00000000000 000000000000 000 0000000 0 01234577
Q ss_pred eEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh-CCCCCcccccccC
Q 020767 236 GILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE-QRFEQHPCLYCSD 307 (321)
Q Consensus 236 ~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~-~~~~Q~P~l~~~~ 307 (321)
.++..|+.++..||... ..++.|+.+|++.|++........+++.+|+..|.. .+.+|.|++.+..
T Consensus 202 ~Li~ysT~pG~vs~R~~------~~GS~fiq~L~~~l~~~~~~~dl~~ilt~V~~~V~~~~~~kQ~P~~~stL 268 (277)
T 1nw9_B 202 IFVSYSTFPGFVSWRDP------KSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFL 268 (277)
T ss_dssp EEEEEECCCCBSSTTCT------TSCBHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHTTCCSCCCCCCEECC
T ss_pred EEEEEcCCCCeEEEcCC------CCCcHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhccCccCcccceeee
Confidence 88888999999999753 356899999999999855457899999999998865 4778999998765
No 13
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=99.71 E-value=5.4e-17 Score=147.17 Aligned_cols=210 Identities=14% Similarity=0.162 Sum_probs=138.7
Q ss_pred CCcEEEEEEeec-CCC-CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh-CCCC
Q 020767 5 GSKRIAVLVGCN-YPN-TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK-AEAG 81 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~-~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~-~~~~ 81 (321)
.+++.||||++. |.. ...++.|+.+|++.|.++|++ +||. |.+..| .|.++|.++|+++.+. ....
T Consensus 18 ~~rg~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~~~~~~h~~~ 86 (259)
T 3sir_A 18 KNRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQ-LDFE---VTVYKD-------CRYKDILRTIEYSASQNHSDS 86 (259)
T ss_dssp SEEEEEEEEEECCC-----------CCHHHHHHHHHHH-TTCE---EEEEEE-------CSHHHHHHHHHHHHTSCCTTE
T ss_pred CCccEEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHH-CCCE---EEEEeC-------CCHHHHHHHHHHHHHhhccCC
Confidence 478899999996 543 356788999999999999986 8997 777777 6999999999999875 5678
Q ss_pred CEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhCC-------CCCeEEEEEeCCCCCccccccc
Q 020767 82 DVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLP-------KGASFTVFSDSCHSGGLIDKAK 154 (321)
Q Consensus 82 D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l~-------~~~~v~~ilD~C~SG~~~~~~~ 154 (321)
|.++|+|.|||.+ .++++.|.. + .|.++++.+. .++-.++|+|+|+...+-++..
T Consensus 87 d~~v~~~lsHG~~--------------g~i~~~D~~-v---~l~~i~~~f~~~~cpsL~gKPKlf~iQACRG~~~~~g~~ 148 (259)
T 3sir_A 87 DCILVAILSHGEM--------------GYIYAKDTQ-Y---KLDNIWSFFTANHCPSLAGKPKLFFIQACQGDRLDGGVT 148 (259)
T ss_dssp EEEEEEEEECTTC--------------CCCCCTTHH-H---HHHHTTGGGSTTTCGGGSSSCEEEEEEEETTSCEEC---
T ss_pred CEEEEEEecCCCC--------------CeEEeCCCc-E---EHHHHHHHhhhccCccccCCCCEEEEecCCCCcccCCcc
Confidence 9999999999986 246677653 2 3444444442 2445689999998544321100
Q ss_pred cccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCC
Q 020767 155 EQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPD 234 (321)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~ 234 (321)
.. ... ... .|. ..... ......
T Consensus 149 -------------------~~-~~~-~~~--------dg~----------------~~~~~-------------~ip~~a 170 (259)
T 3sir_A 149 -------------------MQ-RSQ-TET--------DGD----------------SSMSY-------------KIPVHA 170 (259)
T ss_dssp -----------------------------------------------------------CE-------------ECCCCT
T ss_pred -------------------cc-cCc-ccc--------cCc----------------ccccc-------------cCCCCC
Confidence 00 000 000 000 00000 022456
Q ss_pred CeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh------------CCCCCccc
Q 020767 235 DGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE------------QRFEQHPC 302 (321)
Q Consensus 235 ~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~------------~~~~Q~P~ 302 (321)
+.++..|+.++..||... ..++.|+.+|++.|++.+......+|+..|+..|.. .+.+|.|+
T Consensus 171 D~Li~yST~pG~vs~r~~------~~GS~fiq~L~~~l~~~~~~~dl~~ilt~V~~~V~~~~~s~~~~~~~~~~~kQ~P~ 244 (259)
T 3sir_A 171 DFLIAYSTVPGFYSWRNT------TRGSWFMQSLCAELAANGKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQQKQIPC 244 (259)
T ss_dssp TEEEEEEEECCSCCCSSC------CCSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHTTC--------------CCCE
T ss_pred CEEEEEECCCCeEeecCC------CCCcHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcccCCcccccCCceEeeE
Confidence 888888889999999754 457999999999998865457899999999998863 35679999
Q ss_pred ccccC
Q 020767 303 LYCSD 307 (321)
Q Consensus 303 l~~~~ 307 (321)
+.+..
T Consensus 245 ~~stL 249 (259)
T 3sir_A 245 ITTML 249 (259)
T ss_dssp EEECC
T ss_pred eEEee
Confidence 98765
No 14
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=99.70 E-value=1.7e-15 Score=138.55 Aligned_cols=223 Identities=13% Similarity=0.140 Sum_probs=153.4
Q ss_pred CCCcEEEEEEeec-CCC--CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh-CC
Q 020767 4 KGSKRIAVLVGCN-YPN--TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK-AE 79 (321)
Q Consensus 4 ~~~~~~Al~IGi~-y~~--~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~-~~ 79 (321)
..+++.||||++. |.. ...++.|+.+|++.|.++|++ +||. |.+..| .|.++|.++|+++... ..
T Consensus 18 ~~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~~~~~~h~ 86 (278)
T 3od5_A 18 HRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSD-LGFE---VKCFND-------LKAEELLLKIHEVSTVSHA 86 (278)
T ss_dssp SSBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHHSCCT
T ss_pred CCCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHH-CCCE---EEEecC-------CCHHHHHHHHHHHHhhccc
Confidence 3478899999996 553 468999999999999999986 8997 777777 6999999999998664 46
Q ss_pred CCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCcccccccc
Q 020767 80 AGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGGLIDKAKE 155 (321)
Q Consensus 80 ~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~~~~~~~~ 155 (321)
..|.++|+|.+||.. .++++.|.. ++.++|...+..- + .++-.++|+|+|+....-+.-..
T Consensus 87 ~~d~~vv~ilSHG~~--------------g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~~~ 151 (278)
T 3od5_A 87 DADCFVCVFLSHGEG--------------NHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIP 151 (278)
T ss_dssp TBSCEEEEEESCEET--------------TEEECSSSE-EEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCEECC
T ss_pred CCCEEEEEEECCCCC--------------CEEEEeCCe-EEHHHHHHHhccccChhhcCCCcEEEEecCCCCcccCCeec
Confidence 789999999999984 368888876 6666666665431 1 24556899999995443221100
Q ss_pred ccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCC
Q 020767 156 QIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDD 235 (321)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~ 235 (321)
.+. .....-.++.. .. . + +..... ......+
T Consensus 152 ---~~~----------~~~~~~~l~~~------------~~-~---------~-~~~~~~-------------~iP~~aD 182 (278)
T 3od5_A 152 ---LDV----------VDNQTEKLDTN------------IT-E---------V-DAASVY-------------TLPAGAD 182 (278)
T ss_dssp ---C------------------------------------------------------CC-------------CEETTTT
T ss_pred ---ccc----------ccccccccccc------------cc-c---------c-cccccc-------------ccCCCCC
Confidence 000 00000000000 00 0 0 000000 0124578
Q ss_pred eEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhC-----------CCCCccccc
Q 020767 236 GILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQ-----------RFEQHPCLY 304 (321)
Q Consensus 236 ~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~-----------~~~Q~P~l~ 304 (321)
.++..|+.++..||... ...+.|+.+|++.|++........+|+.+|+..|... +.+|.|++.
T Consensus 183 ~Li~yST~pG~vs~R~~------~~GS~fIq~L~~~l~~~~~~~dl~~ilt~Vn~~V~~~~~~~~~~~~~~~~kQ~P~~~ 256 (278)
T 3od5_A 183 FLMCYSVAEGYYSHRET------VNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFA 256 (278)
T ss_dssp EEEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHCCCCCCSSGGGTTCBCCCEEE
T ss_pred eEEEEeCCCCeEEecCC------CCCcHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhhcCCCccccCceEcceeE
Confidence 88888999999999864 4579999999999988654578999999999988742 567999998
Q ss_pred ccC
Q 020767 305 CSD 307 (321)
Q Consensus 305 ~~~ 307 (321)
+..
T Consensus 257 stL 259 (278)
T 3od5_A 257 SML 259 (278)
T ss_dssp ECC
T ss_pred Eec
Confidence 654
No 15
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=99.70 E-value=1.8e-15 Score=138.02 Aligned_cols=219 Identities=14% Similarity=0.104 Sum_probs=152.1
Q ss_pred CCcEEEEEEeec-CCC---------CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHH
Q 020767 5 GSKRIAVLVGCN-YPN---------TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRM 74 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~---------~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l 74 (321)
.++.+||||++. |.. ...+..|+.+|++.|.++|++ +||. |.+..| .|..+|.++|+++
T Consensus 15 ~~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~-LGF~---V~~~~d-------lt~~em~~~l~~~ 83 (271)
T 3h11_B 15 KPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEE-LHFE---IKPHDD-------CTVEQIYEILKIY 83 (271)
T ss_dssp SSCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHH
T ss_pred CCCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHH-CCCE---EEEEeC-------CCHHHHHHHHHHH
Confidence 478899999995 543 156789999999999999986 8997 777777 6999999999999
Q ss_pred HHh-CCCCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCcc
Q 020767 75 VSK-AEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGGL 149 (321)
Q Consensus 75 ~~~-~~~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~~ 149 (321)
.+. .+..|.++++|.+||.. .++++.|...++.++|...+..- + .++-.++|+|+|+....
T Consensus 84 ~~~~h~~~d~~v~~ilSHG~~--------------g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~ 149 (271)
T 3h11_B 84 QLMDHSNMDCFICCILSHGDK--------------GIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNY 149 (271)
T ss_dssp HHSCCTTCSCEEEEEESCEET--------------TEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCCSSBC
T ss_pred HHhcCCCCCEEEEEEEcCCcC--------------CEEEecCCCeecHHHHHHHhhhccChhhcCCccEEEEeccCCCcc
Confidence 874 35689999999999985 37889998767766776655421 1 34556899999986543
Q ss_pred ccccccccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhcc
Q 020767 150 IDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESW 229 (321)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~ 229 (321)
-++... ..+ . +....++ .+ . +... .. .
T Consensus 150 ~~gv~~--~~~-----------------~-~~~~~~e-------~d---~--------~~~~--~~-------------~ 176 (271)
T 3h11_B 150 QKGIPV--ETA-----------------S-EEQPYLE-------MA---L--------SSPQ--TR-------------Y 176 (271)
T ss_dssp C------------------------------------------------------------C--CC-------------C
T ss_pred cCCcee--ccC-----------------C-ccccccc-------cc---c--------cccc--cc-------------c
Confidence 221100 000 0 0000000 00 0 0000 00 0
Q ss_pred CCCCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHhC-----CCCCcccc
Q 020767 230 SLKPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSG-PLSNKEVVLMARKILKEQ-----RFEQHPCL 303 (321)
Q Consensus 230 ~~~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~-~~t~~~L~~~v~~~v~~~-----~~~Q~P~l 303 (321)
.....+.++..|+.++..||... ...+.|+.+|++.|++... .....+|+.+|+..|... ..+|.|++
T Consensus 177 iP~~aD~Li~yST~pG~vs~R~~------~~GS~fIq~L~~~l~~~~~~~~dl~~ilt~Vn~~V~~~~~~~~~~kQ~P~~ 250 (271)
T 3h11_B 177 IPDEADFLLGMATVNNCVSYRNP------AEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSNKDDKKNMGKQMPQP 250 (271)
T ss_dssp SCSSSSEEEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHTC------CCCCCEE
T ss_pred cCCCCceEEEEECCCCceeecCC------CCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcccCCCCCEEeeEE
Confidence 22456788888889999999764 3568999999999988533 468999999999998753 46799999
Q ss_pred cccC
Q 020767 304 YCSD 307 (321)
Q Consensus 304 ~~~~ 307 (321)
.+..
T Consensus 251 ~stL 254 (271)
T 3h11_B 251 TFTL 254 (271)
T ss_dssp EECC
T ss_pred EEEe
Confidence 7654
No 16
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=99.56 E-value=5.6e-14 Score=120.15 Aligned_cols=119 Identities=14% Similarity=0.308 Sum_probs=93.8
Q ss_pred CCcEEEEEEeecCCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh--CCCCC
Q 020767 5 GSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK--AEAGD 82 (321)
Q Consensus 5 ~~~~~Al~IGi~y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~--~~~~D 82 (321)
.++++|||||+..|....++.|+.+|++.|+++|++ +||. |.+..| .|+.+|+++|+++..+ .+..|
T Consensus 41 ~~~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~-LgF~---V~~~~d-------lt~~em~~~l~~f~~~~d~~~~d 109 (178)
T 2h54_A 41 SRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQN-LGYS---VDVKKN-------LTASDMTTELEAFAHRPEHKTSD 109 (178)
T ss_dssp TCCCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHTCGGGGGCS
T ss_pred CcCCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHH-CCCE---EEEecC-------CCHHHHHHHHHHHHhhhhcCCCC
Confidence 357899999997555678999999999999999986 8997 777777 5999999999999863 46789
Q ss_pred EEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCC-----CCCcHHHHHHHHHhCC----CCCeEEEEEeCCCCCc
Q 020767 83 VLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDF-----NLITDLDFRQLVNRLP----KGASFTVFSDSCHSGG 148 (321)
Q Consensus 83 ~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~-----~~i~~~~l~~ll~~l~----~~~~v~~ilD~C~SG~ 148 (321)
.++|||.|||.+. ++...|. ..++.++|..++..-. .++..++|||||+.+.
T Consensus 110 ~~v~~~lsHG~~g--------------~i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL~gKPKlffiqACRg~~ 170 (178)
T 2h54_A 110 STFLVFMSHGIRE--------------GICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRGDS 170 (178)
T ss_dssp CEEEEEESCBCSS--------------CEECTTCCSSSCCEECHHHHHHHHSTTTCGGGTTSCEEEEEESCSSSB
T ss_pred EEEEEEecCCCCC--------------eEEeecCCcccCcEEEHHHHHHHHhhcCChhhcCCceEEEEECCCCCC
Confidence 9999999999862 3555665 2466777777775421 2455689999998644
No 17
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=99.07 E-value=1.8e-09 Score=98.18 Aligned_cols=209 Identities=9% Similarity=0.064 Sum_probs=137.0
Q ss_pred CCcEEEEEEeecCCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHH--hCCCCC
Q 020767 5 GSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVS--KAEAGD 82 (321)
Q Consensus 5 ~~~~~Al~IGi~y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~--~~~~~D 82 (321)
.++.+||+|-+. .+|++.|.++|++ +||. |.+..| .|..+|.+.|+++.. .....|
T Consensus 41 ~~rG~~LIinn~-----------~~D~~~L~~~f~~-LgF~---V~~~~d-------lt~~em~~~l~~~~~~~dh~~~d 98 (272)
T 3h11_A 41 KPLGICLIIDCI-----------GNETELLRDTFTS-LGYE---VQKFLH-------LSMHGISQILGQFACMPEHRDYD 98 (272)
T ss_dssp SSSEEEEEEESS-----------CCCCSHHHHHHHH-HTEE---EEEEES-------CBHHHHHHHHHHHHTCGGGGGCS
T ss_pred CcceEEEEECCc-----------hHHHHHHHHHHHH-CCCE---EEEeeC-------CCHHHHHHHHHHHHhccccCCCC
Confidence 467788888752 1599999999986 8997 777777 699999999999986 477899
Q ss_pred EEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCC--CCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCccccccccc
Q 020767 83 VLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFN--LITDLDFRQLVNRL--P--KGASFTVFSDSCHSGGLIDKAKEQ 156 (321)
Q Consensus 83 ~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~--~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~~~~~~~~~ 156 (321)
.++++|.+||.. .++++.|.. .+..++|...+..- + .++-.++|+++|+....-...
T Consensus 99 ~~v~~ilSHG~~--------------g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKlffiQACRG~~~~~~~--- 161 (272)
T 3h11_A 99 SFVCVLVSRGGS--------------QSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKMFFIQNYVVSEGQLEN--- 161 (272)
T ss_dssp EEEEEEEEEEET--------------TEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEEEEEEEEEC----------
T ss_pred EEEEEEEcCCCC--------------CeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcEEEEECCCCCCcccCC---
Confidence 999999999984 368888876 47778888877542 1 355568999999753211000
Q ss_pred cCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCCe
Q 020767 157 IGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDG 236 (321)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (321)
+... ...+.+.. .++... ..+. .. ......+.
T Consensus 162 -g~~~-------------~~D~~~~~----------~~~~~~---------~~~~--~~-------------~iP~~aDf 193 (272)
T 3h11_A 162 -SSLL-------------EVDGPAMK----------NVEFKA---------QKRG--LC-------------TVHREADF 193 (272)
T ss_dssp -------------------------------------------------------------------------CCTTCSE
T ss_pred -Ccce-------------eccCcccc----------cccccc---------cccc--cc-------------cCCCCCCE
Confidence 0000 00000000 000000 0000 00 02245677
Q ss_pred EEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhC------CCCCcccccccC
Q 020767 237 ILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQ------RFEQHPCLYCSD 307 (321)
Q Consensus 237 ~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~------~~~Q~P~l~~~~ 307 (321)
++..|+.++-.||... ...+.|..+|++.|++.. .....+|+..|+..|... ..+|.|+..+..
T Consensus 194 L~~yST~pg~~s~R~~------~~GSwfIq~Lc~~l~~~~-~~dl~~ilt~Vn~~V~~~~~~~~~~~~~~p~~~stL 263 (272)
T 3h11_A 194 FWSLCTADMSLLEQSH------SSPSLYLQCLSQKLRQER-KRPLLDLHIELNGYMYDWNSRVSAKEKYYVWLQHTL 263 (272)
T ss_dssp EEEEEEEEGGGTSSTT------CCCCHHHHHHHHHHHHCT-TSCHHHHHHHHHHHHHHHHTTSCGGGCEEEEEEECC
T ss_pred EEEEeccCCeEEEEeC------CCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhccCCCcceEeeEeeeee
Confidence 7777888888888643 356899999999999854 468999999999988651 344678877544
No 18
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=99.07 E-value=3.1e-09 Score=89.66 Aligned_cols=120 Identities=18% Similarity=0.283 Sum_probs=95.0
Q ss_pred CCCcEEEEEEeec-CCC--CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHH--hC
Q 020767 4 KGSKRIAVLVGCN-YPN--TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVS--KA 78 (321)
Q Consensus 4 ~~~~~~Al~IGi~-y~~--~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~--~~ 78 (321)
..++.+||+|.+. |.. ...+..|+..|++.|.++|++ +||. |.+..| .|.++|.+.|+++.+ ..
T Consensus 30 ~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~-LgF~---V~~~~d-------lt~~em~~~l~~~~~~~dh 98 (167)
T 1pyo_A 30 SRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKL-LGYD---VHVLCD-------QTAQEMQEKLQNFAQLPAH 98 (167)
T ss_dssp CSSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHH-TTEE---EEEEES-------CCHHHHHHHHHHHHTCGGG
T ss_pred CCCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHH-CCCE---EEEeeC-------CCHHHHHHHHHHhhhhhhc
Confidence 3568999999985 543 246789999999999999985 9997 677777 599999999999987 35
Q ss_pred CCCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCc
Q 020767 79 EAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGG 148 (321)
Q Consensus 79 ~~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~ 148 (321)
...|.++++|.+||.. .++.+.|...+..++|...+..- + .++-.++|+++|+...
T Consensus 99 ~~~dc~vv~ilSHG~~--------------g~i~g~D~~~v~l~~i~~~F~~~~CpsL~gKPKlffiQACRG~~ 158 (167)
T 1pyo_A 99 RVTDSCIVALLSHGVE--------------GAIYGVDGKLLQLQEVFQLFDNANCPSLQNKPKMFFIQACRGDE 158 (167)
T ss_dssp GTSSEEEEEEESCEET--------------TEEECTTSCEEEHHHHHHHTSTTTCGGGTTSCEEEEEESCSSSB
T ss_pred cCCCEEEEEeCCCCCC--------------CeEEEeCCCEEcHHHHHHHhcccCChhHcCCCeEEEEECCCCCC
Confidence 6789999999999975 36888888767777777776531 1 3555689999997544
No 19
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=98.95 E-value=1.2e-08 Score=84.24 Aligned_cols=118 Identities=10% Similarity=0.163 Sum_probs=90.7
Q ss_pred CCcEEEEEEeec-CCC--CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhC-CC
Q 020767 5 GSKRIAVLVGCN-YPN--TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKA-EA 80 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~--~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~-~~ 80 (321)
.++.+||+|.+. |.. ...+..|+..|++.|.++|++ +||. |.+..| .|..+|.+.|+.+.+.- ..
T Consensus 14 ~~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~-LgF~---V~~~~d-------lt~~em~~~l~~~~~~dh~~ 82 (146)
T 2dko_A 14 PEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRN-LKYE---VRNKND-------LTREEIVELMRDVSKEDHSK 82 (146)
T ss_dssp SEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHHSCCTT
T ss_pred CCceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHH-CCCE---EEEeeC-------CCHHHHHHHHHHHHHhhcCC
Confidence 467899999885 443 246789999999999999986 9997 777777 59999999999998753 56
Q ss_pred CCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCc
Q 020767 81 GDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGG 148 (321)
Q Consensus 81 ~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~ 148 (321)
.|.+++++.+||.. .++.+.|. .+..++|...+..- + .++-.++|+++|+...
T Consensus 83 ~dc~vv~ilSHG~~--------------g~i~g~D~-~~~l~~i~~~F~~~~CpsL~gKPKlffiQACRG~~ 139 (146)
T 2dko_A 83 RSSFVCVLLSHGEE--------------GIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTE 139 (146)
T ss_dssp EEEEEEEEESCEET--------------TEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSB
T ss_pred CCeEEEEeccCCCC--------------CEEEEeCC-cEeHHHHHHHhccccChhhcCCCeEEEEECCCCCC
Confidence 79999999999973 36778887 55666666555321 1 3555689999997544
No 20
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=98.93 E-value=1.2e-08 Score=85.87 Aligned_cols=118 Identities=16% Similarity=0.222 Sum_probs=92.5
Q ss_pred CCcEEEEEEeec-CCC---------CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHH
Q 020767 5 GSKRIAVLVGCN-YPN---------TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRM 74 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~---------~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l 74 (321)
.++.+||||.+. |.. ...+..|+..|++.|.++|+. +||. |.+..| .|..+|.+.|+.+
T Consensus 21 ~~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~-LgF~---V~~~~d-------lt~~em~~~l~~~ 89 (164)
T 1qtn_A 21 KPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEE-LHFE---IKPHDD-------CTVEQIYEILKIY 89 (164)
T ss_dssp SSCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHH
T ss_pred CCceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHH-CCCE---EEEecC-------CCHHHHHHHHHHH
Confidence 457899999885 432 246889999999999999985 9997 677776 5999999999999
Q ss_pred HHh-CCCCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCC
Q 020767 75 VSK-AEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSG 147 (321)
Q Consensus 75 ~~~-~~~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG 147 (321)
... -...|.+++++.+||.. .++...|...+..++|...+..- + .++-.++|+.+|...
T Consensus 90 ~~~dh~~~dc~vv~ilSHG~~--------------g~i~g~D~~~v~i~~i~~~F~~~~CpsL~gKPKlFfiQACRG~ 153 (164)
T 1qtn_A 90 QLMDHSNMDCFICCILSHGDK--------------GIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGD 153 (164)
T ss_dssp HHSCCTTCSCEEEEEESCEET--------------TEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCSSS
T ss_pred HHhhccCCCEEEEEeCCCCCC--------------CEEEeeCCCEeeHHHHHHHhccccChhhcCCCeEEEEECCCCC
Confidence 765 46789999999999974 36788887666667777666441 1 355568999999743
No 21
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=98.72 E-value=1.2e-07 Score=80.49 Aligned_cols=117 Identities=15% Similarity=0.245 Sum_probs=89.1
Q ss_pred CCcEEEEEEeec-CCC--CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh-CCC
Q 020767 5 GSKRIAVLVGCN-YPN--TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK-AEA 80 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~--~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~-~~~ 80 (321)
.++.+||||.+. +.. ...+..|+..|++.|.++|+. +||. |.+..| .|..+|.+.|+++... -..
T Consensus 42 ~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~-LGF~---V~~~~d-------lt~~em~~~l~~~~~~dh~~ 110 (179)
T 3p45_A 42 RRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSD-LGFE---VKCFND-------LKAEELLLKIHEVSTVSHAD 110 (179)
T ss_dssp SBCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHH-TTCE---EEEEES-------CCHHHHHHHHHHHHTSCCTT
T ss_pred CccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHH-CCCE---EEEEeC-------CCHHHHHHHHHHHhhhhcCC
Confidence 577899999995 442 457889999999999999986 9997 677777 5999999999998653 346
Q ss_pred CCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCC
Q 020767 81 GDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSG 147 (321)
Q Consensus 81 ~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG 147 (321)
.|.+++++..||.. ..+...|.. +..++|..++..- + .++-.++|+.+|.-.
T Consensus 111 ~dc~vvvilSHG~~--------------g~I~g~D~~-v~l~~I~~~F~~~~CpsL~gKPKlFfIQACRG~ 166 (179)
T 3p45_A 111 ADCFVCVFLSHGEG--------------NHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGN 166 (179)
T ss_dssp BSCEEEEEESCEET--------------TEEECSSSE-EEHHHHHGGGSGGGCGGGTTSCEEEEEECC---
T ss_pred CCEEEEEEeccCCC--------------CEEEEECCE-EEHHHHHHhcccccChhhCCCCcEEEEECCCCC
Confidence 79999999999984 367778876 6666776665421 1 355568999999743
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=98.70 E-value=1.5e-07 Score=79.57 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=88.1
Q ss_pred CCcEEEEEEeec-CCC--CCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh-CCC
Q 020767 5 GSKRIAVLVGCN-YPN--TKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK-AEA 80 (321)
Q Consensus 5 ~~~~~Al~IGi~-y~~--~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~-~~~ 80 (321)
.++.+||+|.+. +.. ...+..|+..|++.|.++|.. +||. |.+..| .|..+|.+.|+.+.+. -..
T Consensus 42 ~~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~-LgF~---V~v~~d-------lt~~em~~~l~~~s~~dh~~ 110 (173)
T 2ql9_A 42 EKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRS-LGFD---VIVYND-------CSCAKMQDLLKKASEEDHTN 110 (173)
T ss_dssp SEEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHH-HTEE---EEEEES-------CCHHHHHHHHHHHHTSCCTT
T ss_pred CCceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHH-CCCE---EEEEeC-------CCHHHHHHHHHHHHHhhccC
Confidence 467789999885 442 245678999999999999985 8997 677776 5999999999998765 356
Q ss_pred CCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHHhC--C--CCCeEEEEEeCCCCCc
Q 020767 81 GDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRL--P--KGASFTVFSDSCHSGG 148 (321)
Q Consensus 81 ~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l--~--~~~~v~~ilD~C~SG~ 148 (321)
.|.+++++.+||.. .++...|.. +..++|...+..- + .++-.++|+.+|....
T Consensus 111 ~dc~vvvilSHG~~--------------g~I~g~D~~-~~i~~I~~~F~~~~CpsL~gKPKlFfIQACRG~~ 167 (173)
T 2ql9_A 111 AACFACILLSHGEE--------------NVIYGKDGV-TPIKDLTAHFRGDRCKTLLEKPKLFFIQACRGTE 167 (173)
T ss_dssp EEEEEEEEESCEET--------------TEEEETTEE-EEHHHHHGGGSTTTCGGGTTSCEEEEEESCCSSB
T ss_pred CCeEEEeecCCCCC--------------CEEEEcCCc-EEHHHHHHHcCcccChhHcCCCeEEEEECCCCCC
Confidence 79999999999975 267777763 5555555554321 1 3555689999997543
No 23
>2ql9_B Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_B* 2ql5_B* 2qlb_B* 2qlf_B 2qlj_B* 3edr_B 3ibc_B 3ibf_B 1i51_B
Probab=92.63 E-value=0.33 Score=36.44 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=55.5
Q ss_pred CCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh-----------CCCCCc
Q 020767 232 KPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE-----------QRFEQH 300 (321)
Q Consensus 232 ~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~-----------~~~~Q~ 300 (321)
.....++..|+.++-.||-.. ...+.|-.+|.+.|++.+......+|+..|+..|.. .+.+|.
T Consensus 9 ~~aDfL~~yST~pG~~S~R~~------~~GSwfIq~Lc~~l~~~~~~~dl~~ilt~Vn~~V~~~~~~~~~~~~~~~~kQ~ 82 (97)
T 2ql9_B 9 VEADFLFAYSTVPGYYSWRSP------GRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQI 82 (97)
T ss_dssp TTTTEEEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCCCCSSGGGTTCBCC
T ss_pred CCCCEEEEEeCCCCcEeeecC------CCCCeeHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhccccCCcccCCceEe
Confidence 457788888889999998643 457899999999998855557899999999988864 245799
Q ss_pred ccccccC
Q 020767 301 PCLYCSD 307 (321)
Q Consensus 301 P~l~~~~ 307 (321)
|++....
T Consensus 83 P~~~stL 89 (97)
T 2ql9_B 83 PCVVSML 89 (97)
T ss_dssp CEEEECC
T ss_pred eeeEEEE
Confidence 9988643
No 24
>2dko_B Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 2c2k_B* 2c2m_B* 2c2o_B* 2c1e_B* 2cdr_B* 2cnk_B* 2cnl_B* 2cnn_B* 2cno_B* 2cjy_B 1pau_B 1re1_B* 1rhk_B* 1rhm_B* 1rhq_B* 1rhr_B* 1rhu_B* 1rhj_B* 1i3o_B* 3edq_B ...
Probab=92.50 E-value=0.35 Score=36.75 Aligned_cols=71 Identities=15% Similarity=0.091 Sum_probs=55.8
Q ss_pred CCCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhC-----------CCCC
Q 020767 231 LKPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQ-----------RFEQ 299 (321)
Q Consensus 231 ~~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~-----------~~~Q 299 (321)
......++..|+.++-.||-.. ...+.|-.+|.+.|++.+......+|+..|+..|... +.+|
T Consensus 14 P~~aDfL~~yST~pG~vS~R~~------~~GSwfIq~Lc~~l~~~~~~~dl~~ilT~Vn~~V~~~~~~~~~~~~~~~~kQ 87 (103)
T 2dko_B 14 PVEADFLYAYSTAPGYYSWRNS------KDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQ 87 (103)
T ss_dssp CTTTTEEEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCCCCSSGGGTTCBC
T ss_pred CCCCCEEEEEeCCCCcEeEEcC------CCCCeeHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHhcccCCCCccCCceE
Confidence 3457788888999999998643 4578999999999988555578999999999887642 5579
Q ss_pred cccccccC
Q 020767 300 HPCLYCSD 307 (321)
Q Consensus 300 ~P~l~~~~ 307 (321)
.|++....
T Consensus 88 ~P~~~stL 95 (103)
T 2dko_B 88 IPCIVSML 95 (103)
T ss_dssp CCEEEECC
T ss_pred eeeeEEEE
Confidence 99987543
No 25
>1sc3_B Interleukin-1 beta convertase; malonate-bound caspase-1, hydrolase; 1.80A {Homo sapiens} SCOP: c.17.1.1 PDB: 1ice_B 1bmq_B* 1rwm_B* 1rwk_B* 1rwo_B* 1rwp_B* 1rwv_B* 1rww_B* 1rwn_B* 1sc1_B 1rwx_B 1sc4_B 2h4y_B* 2hbq_B* 2hbr_B* 3ns7_B* 3d6f_B* 3d6h_B* 3d6m_B* 2h4w_B* ...
Probab=92.23 E-value=0.51 Score=34.77 Aligned_cols=67 Identities=13% Similarity=0.081 Sum_probs=54.7
Q ss_pred CCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh-CCCCCccccc
Q 020767 232 KPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE-QRFEQHPCLY 304 (321)
Q Consensus 232 ~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~-~~~~Q~P~l~ 304 (321)
...+.++..|+.++=.|+-.. ...+.|-.+|++.|++........+|+.+|+..+.. .+.+|.|++.
T Consensus 7 ~~aDfL~~yST~pG~~S~R~~------~~GSwfIq~Lc~~l~~~~~~~dl~~il~~V~~~v~~~~~~kQ~P~~~ 74 (88)
T 1sc3_B 7 IEKDFIAFCSSTPDNVSWRHP------TMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQPDGRAQMPTTE 74 (88)
T ss_dssp SSCSEEEEESSCTTBCCCEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTCSCCSSCCCCEEE
T ss_pred CCCCEEEEEeCCCCCEeeEcC------CCCCHHHHHHHHHHHHhCCcCcHHHHHHHHHHHHhccCCceEcCEeE
Confidence 467788888999999998653 457899999999998865557899999999888765 3668999985
No 26
>2xzd_B Caspase-3; hydrolase-protein binding complex, de novo protein, apoptosi ankyrin repeat protein, ribosome display; 2.10A {Homo sapiens} PDB: 2xzt_B 2y0b_B
Probab=91.85 E-value=0.46 Score=37.09 Aligned_cols=70 Identities=16% Similarity=0.104 Sum_probs=55.7
Q ss_pred CCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhC-----------CCCCc
Q 020767 232 KPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQ-----------RFEQH 300 (321)
Q Consensus 232 ~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~-----------~~~Q~ 300 (321)
.....++..|+.++-.||-.. ...+.|-.+|.+.|++.+......+|+..|+..|... +.+|.
T Consensus 14 ~~aDfLi~yST~pG~vS~R~~------~~GSwFIQ~Lc~vl~~~~~~~dl~~ilT~Vn~~Va~~~es~~~~~~~~~~KQ~ 87 (118)
T 2xzd_B 14 VEADFLYAYSTAPGYYSWRNS------KDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQI 87 (118)
T ss_dssp TTTTEEEEESSCTTBCCCEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHCCCCCSSGGGTTCBCC
T ss_pred CCCCEEEEEeCCCCCEeeEeC------CCCCccHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHhccccCCCccCCceEe
Confidence 457788888999999998643 3578999999999988555578999999999888642 45799
Q ss_pred ccccccC
Q 020767 301 PCLYCSD 307 (321)
Q Consensus 301 P~l~~~~ 307 (321)
|++....
T Consensus 88 P~~~stL 94 (118)
T 2xzd_B 88 PCIVSML 94 (118)
T ss_dssp CEEEECC
T ss_pred eeeEEEe
Confidence 9988643
No 27
>1pyo_B Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 2p2c_B 3r5j_B 3r6g_B 3r7b_B 3r7n_B 3r7s_B 3r6l_B
Probab=91.67 E-value=0.51 Score=35.95 Aligned_cols=70 Identities=13% Similarity=0.191 Sum_probs=54.8
Q ss_pred CCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhC----------CCCCcc
Q 020767 232 KPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQ----------RFEQHP 301 (321)
Q Consensus 232 ~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~----------~~~Q~P 301 (321)
.....++..|+.++-.||-.. ...+.|-.+|.+.|++.+......+|+..|+..|... +.+|.|
T Consensus 13 ~~aDfL~~yST~pG~~S~R~~------~~GSwFIq~Lc~~l~~~~~~~dl~~ilt~Vn~~V~~~~~~~~~~~~~~~kQ~P 86 (105)
T 1pyo_B 13 TRSDMICGYACLKGTAAMRNT------KRGSWYIEALAQVFSERACDMHVADMLVKVNALIKDREGYAPGTEFHRCKEMS 86 (105)
T ss_dssp SSCSEEEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHTCCCCCTTSTTTTCBCCC
T ss_pred CCCCEEEEEeCCCCcEEEecC------CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhhccCCCccccCceECC
Confidence 457788888888998888543 3578999999999988554578999999999998752 237889
Q ss_pred cccccC
Q 020767 302 CLYCSD 307 (321)
Q Consensus 302 ~l~~~~ 307 (321)
++....
T Consensus 87 ~~~stL 92 (105)
T 1pyo_B 87 EYCSTL 92 (105)
T ss_dssp EEEECC
T ss_pred EeEEee
Confidence 886644
No 28
>1qtn_B Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_B* 3kjq_B* 2y1l_B 1f9e_B* 1qdu_B*
Probab=90.05 E-value=0.72 Score=34.42 Aligned_cols=70 Identities=11% Similarity=-0.058 Sum_probs=55.3
Q ss_pred CCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCC-CHHHHHHHHHHHHHhC-----CCCCcccccc
Q 020767 232 KPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPL-SNKEVVLMARKILKEQ-----RFEQHPCLYC 305 (321)
Q Consensus 232 ~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~-t~~~L~~~v~~~v~~~-----~~~Q~P~l~~ 305 (321)
.....++..|+.++-.|+-.. ...+.|-.+|.+.|++.+... ...+|+..|+..|... +.+|.|++..
T Consensus 11 ~~aDfL~~ysT~pG~~S~R~~------~~GSwfIq~Lc~~l~~~~~~~~dl~~ilt~Vn~~V~~~~~~~~~~kQ~P~~~s 84 (95)
T 1qtn_B 11 DEADFLLGMATVNNCVSYRNP------AEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSNKDDKKNMGKQMPQPTF 84 (95)
T ss_dssp TTCSEEEEESSCTTBCCEEET------TTEEHHHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHHCCBTTTTBBCCCEEEE
T ss_pred CCCCEEEEEeCCCCcEEEecC------CCCcHHHHHHHHHHHHhCCccccHHHHHHHHHHHHHHhhccCCCceEeeeeEE
Confidence 456788888888998888543 457899999999998855445 7999999999988753 4579999985
Q ss_pred cC
Q 020767 306 SD 307 (321)
Q Consensus 306 ~~ 307 (321)
..
T Consensus 85 tL 86 (95)
T 1qtn_B 85 TL 86 (95)
T ss_dssp CC
T ss_pred EE
Confidence 43
No 29
>3rjm_B Caspase-2; caspase-2, caspase, hydrolase-hydrolase inhibitor; HET: 3PX; 2.55A {Homo sapiens}
Probab=85.61 E-value=3.6 Score=31.85 Aligned_cols=69 Identities=13% Similarity=0.213 Sum_probs=55.5
Q ss_pred CCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhC----------CCCCcc
Q 020767 232 KPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQ----------RFEQHP 301 (321)
Q Consensus 232 ~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~----------~~~Q~P 301 (321)
.....++..|+.++-.||-.. ...+.|-.+|.+.|++........+|+..|+..|... +.+|.|
T Consensus 14 ~eADfL~~yST~pGyvS~R~~------~~GSwFIQ~Lc~vl~~~~~~~dLl~ilT~Vn~~Va~~~~~~~~~~~~~~KQmP 87 (117)
T 3rjm_B 14 TRSDMICGYACLKGTAAMRNT------KRGSWYIEALAQVFSERACDMHVADMLVKVNALIKDREGYAPGTEFHRCKEMS 87 (117)
T ss_dssp SSCSEEEEESSCTTCCCEEET------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHCCCCCTTSTTTTCBCCC
T ss_pred CccCEEEEEcCCCCeECeeec------CCCChHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccCCCCccCCeEEee
Confidence 457788888989999999643 3568999999999988655568999999999998752 267999
Q ss_pred ccccc
Q 020767 302 CLYCS 306 (321)
Q Consensus 302 ~l~~~ 306 (321)
++...
T Consensus 88 ~~~st 92 (117)
T 3rjm_B 88 EYCST 92 (117)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98753
No 30
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=62.40 E-value=40 Score=29.94 Aligned_cols=53 Identities=13% Similarity=0.032 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhcCC-CCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCCc
Q 020767 31 VLAMRDVIINRFGF-DPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTR 94 (321)
Q Consensus 31 a~~~~~~L~~~~gf-~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~~ 94 (321)
...+++.|.+.+|. ++++|.+... +.+.+..++..+ +++||.|++---+|...
T Consensus 69 ~~~l~~~la~~~g~~~~~~i~~~~g--------~t~a~~~~~~~~---~~~gd~Vl~~~~~~~~~ 122 (367)
T 3euc_A 69 SEALRAKLKEVMQVPAGMEVLLGNG--------SDEIISMLALAA---ARPGAKVMAPVPGFVMY 122 (367)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEEEH--------HHHHHHHHHHHT---CCTTCEEEEEESCSCCS
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCC--------HHHHHHHHHHHH---cCCCCEEEEcCCCHHHH
Confidence 34566667666777 5556654333 334444444443 57899888866666543
No 31
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=53.06 E-value=18 Score=32.27 Aligned_cols=52 Identities=6% Similarity=0.059 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCC
Q 020767 30 DVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHG 92 (321)
Q Consensus 30 Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG 92 (321)
....+++.|.+.+|.++++|.+ ++. +.+.+..++..+ .++||.|++---+|.
T Consensus 68 ~~~~lr~~la~~~~~~~~~v~~-~~g-------~t~a~~~~~~~~---~~~gd~vl~~~~~~~ 119 (363)
T 3ffh_A 68 WASSLRKEVADFYQLEEEELIF-TAG-------VDELIELLTRVL---LDTTTNTVMATPTFV 119 (363)
T ss_dssp -CHHHHHHHHHHHTCCGGGEEE-ESS-------HHHHHHHHHHHH---CSTTCEEEEEESSCH
T ss_pred chHHHHHHHHHHhCCChhhEEE-eCC-------HHHHHHHHHHHH---ccCCCEEEEcCCChH
Confidence 3467788888778887777755 432 345555555554 568998888755554
No 32
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=48.95 E-value=21 Score=32.32 Aligned_cols=52 Identities=2% Similarity=-0.046 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCC--CCCcEEEe-eCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCC
Q 020767 33 AMRDVIINRFGF--DPNHIELL-TDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGH 91 (321)
Q Consensus 33 ~~~~~L~~~~gf--~~~~i~~L-~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGH 91 (321)
++++++...+|. ++++|.++ +.. ..+.+.-++.-+..-.++||.|++-=-+|
T Consensus 79 ~ia~~~~~~~~~~~~~~~i~~v~t~G-------~~~al~~~~~~l~~~~~~gd~Vlv~~p~~ 133 (401)
T 7aat_A 79 ASAELALGENSEAFKSGRYVTVQGIS-------GTGSLRVGANFLQRFFKFSRDVYLPKPSW 133 (401)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEH-------HHHHHHHHHHHHHHHCTTCCEEEEEESCC
T ss_pred HHHHHhcCCCccccccCceEEEecCc-------chHHHHHHHHHHHHhccCCCEEEEcCCCc
Confidence 445555433442 36677653 432 33455555555544557899999843333
No 33
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=44.84 E-value=13 Score=29.65 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=15.1
Q ss_pred HHHhCCCCCEEEEEeeCC
Q 020767 74 MVSKAEAGDVLLFHYSGH 91 (321)
Q Consensus 74 l~~~~~~~D~v~~yfSGH 91 (321)
+.+++++||.+|||-|+=
T Consensus 31 ~lr~mk~GD~~~fYhs~~ 48 (145)
T 2hd9_A 31 TLSRVKPGDKLVIYVRQE 48 (145)
T ss_dssp HHTTCCTTCEEEEEECCE
T ss_pred HHHhCCCCCEEEEEEccc
Confidence 446899999999999963
No 34
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=43.98 E-value=36 Score=31.21 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhcCCCC---------CcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCCccCCCCCC
Q 020767 31 VLAMRDVIINRFGFDP---------NHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPI 101 (321)
Q Consensus 31 a~~~~~~L~~~~gf~~---------~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~~~~~~~~g 101 (321)
-++++++|.+.+|.+. ++|. +++. +.+.|...+..+ +++||.|++-=-+|.......
T Consensus 84 r~~ia~~l~~~~g~~~~~~~~~~~~~~i~-~t~G-------~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~--- 149 (425)
T 2r2n_A 84 LSWLKQLQIKLHNPPTIHYPPSQGQMDLC-VTSG-------SQQGLCKVFEMI---INPGDNVLLDEPAYSGTLQSL--- 149 (425)
T ss_dssp HHHHHHHHHHHHCCTTTTSCGGGTCEEEE-EESS-------HHHHHHHHHHHH---CCTTCEEEEESSCCHHHHHHH---
T ss_pred HHHHHHHHHHhcCCCCccccccCCcCcEE-EeCc-------HHHHHHHHHHHh---CCCCCEEEEeCCCcHHHHHHH---
Confidence 3567777776678764 3554 4442 345565566555 468999988655554332110
Q ss_pred CCCCCCCceEEcCCCCCCcHHHHHHHHHhCC---------CCCeEEEEEeCCCCC
Q 020767 102 WPFRQQDEAIVPCDFNLITDLDFRQLVNRLP---------KGASFTVFSDSCHSG 147 (321)
Q Consensus 102 ~~~~~~~~~l~p~D~~~i~~~~l~~ll~~l~---------~~~~v~~ilD~C~SG 147 (321)
...|.....+|.|.+.+..++|.+.++..+ ...+++++.-.+|+.
T Consensus 150 -~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NP 203 (425)
T 2r2n_A 150 -HPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNP 203 (425)
T ss_dssp -GGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTT
T ss_pred -HHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCC
Confidence 011223445565544455677877776431 233454455666553
No 35
>2gbs_A Hypothetical protein RPA0253; alpha-beta, RPR3, NESG, structural genomics, COG294 protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: b.122.1.8
Probab=43.83 E-value=15 Score=29.54 Aligned_cols=19 Identities=16% Similarity=0.172 Sum_probs=15.4
Q ss_pred HHHHHhCCCCCEEEEEeeC
Q 020767 72 DRMVSKAEAGDVLLFHYSG 90 (321)
Q Consensus 72 ~~l~~~~~~~D~v~~yfSG 90 (321)
+.+.+.++.||.+|||=|+
T Consensus 37 rn~mr~Mk~GD~~ffYHS~ 55 (145)
T 2gbs_A 37 KLHMVAMRRGDRAFYYHSN 55 (145)
T ss_dssp HHHHHHCCTTCEEEEEETT
T ss_pred HHHHHhcCCCCEEEEEEeC
Confidence 4455579999999999886
No 36
>1cvr_A Gingipain R, RGPB; caspases, cysteine proteinase, hydrolase-hydrolase inhibitor; HET: H37; 2.00A {Porphyromonas gingivalis} SCOP: b.1.18.12 c.17.1.2
Probab=42.62 E-value=68 Score=30.34 Aligned_cols=73 Identities=19% Similarity=0.300 Sum_probs=40.4
Q ss_pred cEEEEEEeecCCCCC-CCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEE
Q 020767 7 KRIAVLVGCNYPNTK-NELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLL 85 (321)
Q Consensus 7 ~~~Al~IGi~y~~~~-~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~ 85 (321)
++++++|+=+-.... .+-.....+...+++.+.. .++. +|..+.++. +++++|.++|+. ..++
T Consensus 142 r~~~l~ia~~~~~~~~d~G~~~~~~~~~~~~~~~~-~~~~--~v~k~ydp~-----~~~~~I~~~ln~--------G~~i 205 (435)
T 1cvr_A 142 LGQALCIASAEGGPSADNGESDIQHENVIANLLTQ-YGYT--KIIKCYDPG-----VTPKNIIDAFNG--------GISL 205 (435)
T ss_dssp TTEEEEEECSCBCTTSGGGCBHHHHHHHHHHHHHH-HTCS--EEEEEESSS-----CCHHHHHHHHHH--------CCSE
T ss_pred hceEEEEecCCCCcccccchhhhhHHHHHHhhhhc-CCcc--eeEEecCCc-----cCHHHHHHHHhC--------CCeE
Confidence 678888875321111 1101223455566666654 4543 354555543 566777766542 3577
Q ss_pred EEeeCCCCcc
Q 020767 86 FHYSGHGTRI 95 (321)
Q Consensus 86 ~yfSGHG~~~ 95 (321)
+.|.|||...
T Consensus 206 vnY~GHG~~~ 215 (435)
T 1cvr_A 206 VNYTGHGSET 215 (435)
T ss_dssp EEEESCBCSS
T ss_pred EEEecCCCcc
Confidence 8888999873
No 37
>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8
Probab=42.43 E-value=16 Score=29.67 Aligned_cols=19 Identities=21% Similarity=0.193 Sum_probs=15.6
Q ss_pred HHHHHhCCCCCEEEEEeeC
Q 020767 72 DRMVSKAEAGDVLLFHYSG 90 (321)
Q Consensus 72 ~~l~~~~~~~D~v~~yfSG 90 (321)
+.+.+.++.||.+|||=|+
T Consensus 38 rN~mr~Mk~GD~~fFYHS~ 56 (155)
T 1zce_A 38 RNNMRAMKIGDKGFFYHSN 56 (155)
T ss_dssp HHHHHTCCTTCEEEEEETT
T ss_pred HHHHHhccCCCEEEEEEeC
Confidence 4455679999999999887
No 38
>2ar1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP, unknown F; 1.60A {Leishmania major} SCOP: b.122.1.8
Probab=41.32 E-value=18 Score=29.90 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=16.0
Q ss_pred HHHHHhCCCCCEEEEEeeCC
Q 020767 72 DRMVSKAEAGDVLLFHYSGH 91 (321)
Q Consensus 72 ~~l~~~~~~~D~v~~yfSGH 91 (321)
+.+.+.++.||.+|||-|+.
T Consensus 53 RN~mr~Mk~GD~vfFYHS~c 72 (172)
T 2ar1_A 53 RNNMRAMSVGDKVLFYHSNT 72 (172)
T ss_dssp HHHHHHCCTTCEEEEEECSS
T ss_pred HHHHHhcCCCCEEEEEecCC
Confidence 34556899999999998874
No 39
>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A
Probab=41.16 E-value=18 Score=29.37 Aligned_cols=19 Identities=21% Similarity=0.373 Sum_probs=15.1
Q ss_pred HHHHHhCCCCCEEEEEeeC
Q 020767 72 DRMVSKAEAGDVLLFHYSG 90 (321)
Q Consensus 72 ~~l~~~~~~~D~v~~yfSG 90 (321)
+.+.+.++.||.+|||=|+
T Consensus 35 rN~mr~Mk~GD~~ffYHS~ 53 (157)
T 2eve_A 35 RNFLRTMAEGDEFFFYHSS 53 (157)
T ss_dssp HHHHHHCCTTCEEEEEECS
T ss_pred HHHHHhcCCCCEEEEEecC
Confidence 3445578999999999776
No 40
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=41.12 E-value=39 Score=30.97 Aligned_cols=51 Identities=4% Similarity=0.077 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcC---CCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCC
Q 020767 32 LAMRDVIINRFG---FDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGT 93 (321)
Q Consensus 32 ~~~~~~L~~~~g---f~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~ 93 (321)
+.++++|.+++| .++++|.+... +.+.|..++..+ .++||.|++.--+|..
T Consensus 92 ~~la~~l~~~~g~~~~~~~~v~~t~G--------~~~al~~~~~~l---~~~gd~Vl~~~p~y~~ 145 (425)
T 1vp4_A 92 QQILKLLERMYGITGLDEDNLIFTVG--------SQQALDLIGKLF---LDDESYCVLDDPAYLG 145 (425)
T ss_dssp HHHHHHHHHHHCCCSCCGGGEEEEEH--------HHHHHHHHHHHH---CCTTCEEEEEESCCHH
T ss_pred HHHHHHHHhccCCCCCCcccEEEecc--------HHHHHHHHHHHh---CCCCCEEEEeCCCcHH
Confidence 455556654447 45667654433 345555555554 4689988887666643
No 41
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=40.09 E-value=1e+02 Score=27.91 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=20.7
Q ss_pred CcHHHHHHHHHhCCCCCeEEEEEeCCCCCcc
Q 020767 119 ITDLDFRQLVNRLPKGASFTVFSDSCHSGGL 149 (321)
Q Consensus 119 i~~~~l~~ll~~l~~~~~v~~ilD~C~SG~~ 149 (321)
++..++.++++-.. ...+++|+|.+|++..
T Consensus 198 ~~~~~l~~l~~~~~-~~~~~li~De~~~~~~ 227 (404)
T 2o1b_A 198 ATKEVFDEAIAKFK-GTDTKIVHDFAYGAFG 227 (404)
T ss_dssp CCHHHHHHHHHHHT-TSSCEEEEECTTTTCB
T ss_pred CCHHHHHHHHHHHH-HcCCEEEEEccchhcc
Confidence 45566777766554 3457899999998753
No 42
>1r4p_B Sltii B subunit, shiga-like toxin type II B subunit; AB5 toxin; HET: 1PS; 1.77A {Escherichia coli} SCOP: b.40.2.1 PDB: 2ga4_B* 3mxg_A* 2bos_A* 1qoh_A*
Probab=39.92 E-value=10 Score=25.42 Aligned_cols=27 Identities=26% Similarity=0.495 Sum_probs=18.8
Q ss_pred HHHHHHhCC-CCCeEEEEEeCCCCCccc
Q 020767 124 FRQLVNRLP-KGASFTVFSDSCHSGGLI 150 (321)
Q Consensus 124 l~~ll~~l~-~~~~v~~ilD~C~SG~~~ 150 (321)
|..+|.... .|..|+++-.+|+||+..
T Consensus 35 lqpllqsaqltgmtvtiks~tc~sgsgf 62 (70)
T 1r4p_B 35 LQPLLQSAQLTGMTVTIKSSTCESGSGF 62 (70)
T ss_dssp HHHHHHHHHHHTCEEEEECSCCCTTEEC
T ss_pred hhhHhhhceecceEEEEEeccccCCCce
Confidence 444443322 478899999999999753
No 43
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=38.97 E-value=63 Score=30.02 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcCC-CCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCC
Q 020767 32 LAMRDVIINRFGF-DPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHG 92 (321)
Q Consensus 32 ~~~~~~L~~~~gf-~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG 92 (321)
+.+++++.+.+|. ++++|.+ ++. ..+.|..++..+ +++||.|++---+|.
T Consensus 125 ~~ia~~~~~~~g~~~~~~v~~-t~G-------~~~al~~~~~~l---~~~Gd~Vlv~~p~y~ 175 (448)
T 3aow_A 125 ETLMKWLGKRYGISQDNDIMI-TSG-------SQQALDLIGRVF---LNPGDIVVVEAPTYL 175 (448)
T ss_dssp HHHHHHHHHHHCCCTTSEEEE-ESS-------HHHHHHHHHHHH---CCTTCEEEEEESCCH
T ss_pred HHHHHHHHHhcCcCChhhEEE-eCc-------HHHHHHHHHHHH---cCCCCEEEEeCCChH
Confidence 3455555444587 5666644 432 345555555555 568998888655553
No 44
>1c4q_A Protein (shiga-like toxin I subunit B); receptor binding, protein-carbohydrate recognition, OB-fold; HET: GLA GAL BGC; 1.52A {Escherichia coli} SCOP: b.40.2.1 PDB: 1d1i_A* 1czw_A* 1d1k_A* 2xsc_A 1bos_A 1dm0_B 1qnu_A* 1r4q_B 2c5c_A* 1bov_A 4ull_A 1c48_A 1cqf_A* 1czg_A
Probab=38.71 E-value=11 Score=25.25 Aligned_cols=27 Identities=26% Similarity=0.591 Sum_probs=18.8
Q ss_pred HHHHHHhCC-CCCeEEEEEeCCCCCccc
Q 020767 124 FRQLVNRLP-KGASFTVFSDSCHSGGLI 150 (321)
Q Consensus 124 l~~ll~~l~-~~~~v~~ilD~C~SG~~~ 150 (321)
|..+|.... .|..|+++-.+|+||+..
T Consensus 36 lqpllqsaqltgmtvtiks~tc~sgsgf 63 (69)
T 1c4q_A 36 LQSLLLSAQITGMTVTIKTNACHNGGGF 63 (69)
T ss_dssp HHHHHHHHHHHTCEEEEECSCCSTTEEC
T ss_pred hhhHHhhceecceEEEEEeccccCCCCe
Confidence 444443322 478899999999999753
No 45
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=38.44 E-value=1.6e+02 Score=25.65 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=38.5
Q ss_pred chHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCCc
Q 020767 26 GCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTR 94 (321)
Q Consensus 26 ~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~~ 94 (321)
++......+++.|.+.+|.++++|.+... +.+.+..++..+ +++||.|++--.+|...
T Consensus 48 y~~~~~~~l~~~la~~~~~~~~~i~~~~g--------~~~a~~~~~~~l---~~~gd~vl~~~~~~~~~ 105 (354)
T 3ly1_A 48 YAKNEILMLGNKLAAHHQVEAPSILLTAG--------SSEGIRAAIEAY---ASLEAQLVIPELTYGDG 105 (354)
T ss_dssp CCHHHHHHHHHHHHHHTTSCGGGEEEESH--------HHHHHHHHHHHH---CCTTCEEEEESSSCTHH
T ss_pred CCCCchHHHHHHHHHHhCCChHHEEEeCC--------hHHHHHHHHHHH---hCCCCeEEECCCCchHH
Confidence 34445678888888888887777765433 345555555544 47899998877666543
No 46
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=37.17 E-value=62 Score=29.14 Aligned_cols=50 Identities=12% Similarity=0.101 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcC--CCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCC
Q 020767 32 LAMRDVIINRFG--FDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHG 92 (321)
Q Consensus 32 ~~~~~~L~~~~g--f~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG 92 (321)
+.+++++.+.+| .++++|.+ ++. ..+.+..++..+ .++||.|++.--+|.
T Consensus 82 ~~la~~~~~~~g~~~~~~~v~~-t~g-------~t~a~~~~~~~~---~~~gd~vl~~~p~~~ 133 (407)
T 2zc0_A 82 EELAAFLKKYDHLEVSPENIVI-TIG-------GTGALDLLGRVL---IDPGDVVITENPSYI 133 (407)
T ss_dssp HHHHHHHHHHSCCCCCGGGEEE-ESH-------HHHHHHHHHHHH---CCTTCEEEEEESCCH
T ss_pred HHHHHHHHHhcCCCCCcceEEE-ecC-------HHHHHHHHHHHh---cCCCCEEEEeCCChH
Confidence 344555544447 44566643 332 345555555555 468898887655554
No 47
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=36.79 E-value=46 Score=29.97 Aligned_cols=49 Identities=12% Similarity=0.256 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCC
Q 020767 33 AMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHG 92 (321)
Q Consensus 33 ~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG 92 (321)
.+++.|.+.+|.++++|.+ ++. +.+.|..++..+ .++||.|++.--+|.
T Consensus 78 ~l~~~la~~~g~~~~~v~~-~~g-------~~~al~~~~~~~---~~~gd~Vl~~~p~y~ 126 (397)
T 2zyj_A 78 PLRAFVAEWIGVRPEEVLI-TTG-------SQQALDLVGKVF---LDEGSPVLLEAPSYM 126 (397)
T ss_dssp HHHHHHHHHHTSCGGGEEE-ESH-------HHHHHHHHHHHH---CCTTCEEEEEESCCH
T ss_pred HHHHHHHHHhCCChhhEEE-ecc-------HHHHHHHHHHHh---CCCCCEEEEeCCCcH
Confidence 3444454445665566643 332 344555555554 468898888655554
No 48
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=36.29 E-value=24 Score=28.14 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=13.1
Q ss_pred HHHhCCCCCEEEEEeeC
Q 020767 74 MVSKAEAGDVLLFHYSG 90 (321)
Q Consensus 74 l~~~~~~~D~v~~yfSG 90 (321)
+++++++||.+||| .+
T Consensus 34 ~lr~Mk~GD~~~fY-~~ 49 (147)
T 2p5d_A 34 TINKVKVGDKLIIY-EI 49 (147)
T ss_dssp HHTTCCTTCEEEEE-EC
T ss_pred HHHhCCCCCEEEEE-Ee
Confidence 44589999999999 55
No 49
>3eop_A Thymocyte nuclear protein 1; unknown function, nucleus, phosphoprotein; 2.30A {Homo sapiens} SCOP: b.122.1.0
Probab=35.93 E-value=24 Score=29.14 Aligned_cols=17 Identities=18% Similarity=0.305 Sum_probs=14.3
Q ss_pred HHHhCCCCCEEEEEeeC
Q 020767 74 MVSKAEAGDVLLFHYSG 90 (321)
Q Consensus 74 l~~~~~~~D~v~~yfSG 90 (321)
+.+.++.||.+|||=|+
T Consensus 48 ~mR~Mk~GD~~fFYHSn 64 (176)
T 3eop_A 48 FLRAMKLGEEAFFYHSN 64 (176)
T ss_dssp HHHHCCTTCEEEEEECC
T ss_pred HHHhcCCCCEEEEEecC
Confidence 44468999999999988
No 50
>1zpw_X Hypothetical protein TT1823; hyphotetical protein, structural genom NPPSFA, national project on protein structural and function analyses; 1.64A {Thermus thermophilus} SCOP: d.58.58.1
Probab=33.78 E-value=50 Score=23.85 Aligned_cols=55 Identities=7% Similarity=-0.017 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCC-CCEEEEEeeCC
Q 020767 29 NDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEA-GDVLLFHYSGH 91 (321)
Q Consensus 29 ~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~-~D~v~~yfSGH 91 (321)
.....+++.|++ +|...++-.+..+ .|..++.+-...|..-+.+ .|.|+||..+-
T Consensus 16 kr~~kv~k~l~~-yg~rvQ~SVFe~~-------lt~~~~~~L~~~L~~~id~~~Dsv~iy~l~~ 71 (90)
T 1zpw_X 16 TRRVKLANLLKS-YGERVQLSVFECY-------LDERLLEDLRRRARRLLDLGQDALRIYPVAG 71 (90)
T ss_dssp HHHHHHHHHHHT-TEEEEETTEEEEE-------ECHHHHHHHHHHHHHHCCTTTCEEEEEECCS
T ss_pred HHHHHHHHHHHH-hCccceEeEEEEE-------cCHHHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 567788898875 7754333233332 2445544444445455555 69999999887
No 51
>2i0x_A Hypothetical protein PF1117; PSI, STRU genomics, southeast collaboratory for structural genomics, structure initiative, secsg; 2.70A {Pyrococcus furiosus} SCOP: d.58.58.1
Probab=31.78 E-value=1.4e+02 Score=21.19 Aligned_cols=52 Identities=8% Similarity=-0.056 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCC-CCEEEEEeeC
Q 020767 31 VLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEA-GDVLLFHYSG 90 (321)
Q Consensus 31 a~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~-~D~v~~yfSG 90 (321)
...+++.|++ +|...++-.+..+ .|..++.+-...|..-+.+ .|.|.||..+
T Consensus 14 ~~kv~k~l~~-yg~rvQ~SVFeg~-------lt~~~~~~L~~~l~~~id~~~Dsv~iy~l~ 66 (85)
T 2i0x_A 14 VNKVKKFLRM-HLNWVQNSVFEGE-------VTLAEFERIKEGLKKIIDENSDSVIIYKLR 66 (85)
T ss_dssp HHHHHHHHTT-TSEEEETTEEEEE-------CCHHHHHHHHHHHHHSSCTTTCEEEEEEES
T ss_pred HHHHHHHHHH-hCcccceeEEEEE-------CCHHHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence 4567888875 6754443233332 4677776655666666665 5999999999
No 52
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=31.55 E-value=2e+02 Score=26.43 Aligned_cols=71 Identities=7% Similarity=-0.051 Sum_probs=38.3
Q ss_pred HHHhCCCCCEEEEEeeCCCCccCCCCCCCC----CCCCCceEEcC-CCC---CCcHHHHHHHHHhCCCCCeEEEEEeCCC
Q 020767 74 MVSKAEAGDVLLFHYSGHGTRIPSLRPIWP----FRQQDEAIVPC-DFN---LITDLDFRQLVNRLPKGASFTVFSDSCH 145 (321)
Q Consensus 74 l~~~~~~~D~v~~yfSGHG~~~~~~~~g~~----~~~~~~~l~p~-D~~---~i~~~~l~~ll~~l~~~~~v~~ilD~C~ 145 (321)
+...+.+||.|++-=-+|....... . ..|.....+|. |.+ .+..++|.+.++..+.. .+++++-|||
T Consensus 138 ~~~~~~~gd~Vlv~~p~~~~~~~~~----~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~-~~~v~~~~p~ 212 (448)
T 3meb_A 138 FLHLWMPKAEFYMPSTTWPNHYGIY----DKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEK-SIFLFHACAH 212 (448)
T ss_dssp HHHHHCTTCCEEEESSCCTHHHHHH----HHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTT-CEEEEESSSC
T ss_pred HHHHhCCCCEEEECCCCCHhHHHHH----HhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCC-cEEEEeCCCC
Confidence 3344568999988544444321100 0 11224455665 443 35667777777664322 4577778887
Q ss_pred CCcc
Q 020767 146 SGGL 149 (321)
Q Consensus 146 SG~~ 149 (321)
+.+.
T Consensus 213 NPtG 216 (448)
T 3meb_A 213 NPSG 216 (448)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 6553
No 53
>3uws_A Hypothetical protein; clostripain family protein, peptidase_C11, structural genomi center for structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides merdae}
Probab=31.46 E-value=1.4e+02 Score=22.94 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=53.7
Q ss_pred EEEEEEeecCCCCCCCC-cchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCC------------------------CCCCC
Q 020767 8 RIAVLVGCNYPNTKNEL-HGCINDVLAMRDVIINRFGFDPNHIELLTDAPG------------------------SSVMP 62 (321)
Q Consensus 8 ~~Al~IGi~y~~~~~~L-~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~------------------------~~~~~ 62 (321)
.|.++|=+... ++| .++.+|+..|.+.+.+ .|....+|.++.|... .....
T Consensus 9 ~~TvlvYm~~d---N~L~~~~~~di~eM~~g~~~-~g~~~~~llV~~d~~~~~~~L~~i~~~~g~~~~~~lk~y~e~n~~ 84 (126)
T 3uws_A 9 TRTILVYMMAN---NSLNSFASKNIESMIEGATS-KNLNGGNLIVYYAPAGSPPELLRIKEENGVVKKIHLKDYEKQNSA 84 (126)
T ss_dssp EEEEEEEEEES---STTHHHHHHHHHHHHHHCCH-HHHTTCEEEEEEEESSSCCEEEEEEEETTEEEEEEEEECCSCCTT
T ss_pred CeEEEEEEcCC---CChHHHHHHHHHHHHHHHhc-CCCCCcEEEEEEcCCCCCCeEEEEEeCCCcEEeehhhccCCcCcC
Confidence 77777777543 356 5678999999988753 2323334555555211 12345
Q ss_pred cHHHHHHHHHHHHHhCCCCCEEEEEeeCCCCccC
Q 020767 63 TGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIP 96 (321)
Q Consensus 63 T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~~~~ 96 (321)
+.+.+.+.|++..... |-+.-.+-+-+||.-.-
T Consensus 85 d~~~l~~~l~~~~~~~-PA~~y~LIlw~HG~GW~ 117 (126)
T 3uws_A 85 DPDVMRSVIGEVVSQY-PADSYGLVLWSHGTAWL 117 (126)
T ss_dssp SHHHHHHHHHHHHHHS-CEEEEEEEEESCBCTTC
T ss_pred CHHHHHHHHHHHHHhC-CccceEEEEEeCCCcCc
Confidence 6677888888877664 55677777889998543
No 54
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=30.20 E-value=1.8e+02 Score=25.49 Aligned_cols=56 Identities=5% Similarity=-0.092 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh----------CCCCCEEEEEeeCCCCc
Q 020767 31 VLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK----------AEAGDVLLFHYSGHGTR 94 (321)
Q Consensus 31 a~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~----------~~~~D~v~~yfSGHG~~ 94 (321)
...++++|.+.+|.++++|. +++. ..+.+..++..+... ..+||.|++--.+|+..
T Consensus 71 ~~~l~~~la~~~~~~~~~i~-~~~g-------gt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~ 136 (397)
T 3f9t_A 71 EEKAVALLGSLLNNKDAYGH-IVSG-------GTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSF 136 (397)
T ss_dssp HHHHHHHHHHHTTCTTCEEE-EESC-------HHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHH
T ss_pred HHHHHHHHHHHhCCCCCCEE-EecC-------cHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHH
Confidence 34677778778888877765 4443 345566666655443 34689999988888754
No 55
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=29.59 E-value=87 Score=27.75 Aligned_cols=55 Identities=7% Similarity=0.092 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhcC--CCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCC
Q 020767 28 INDVLAMRDVIINRFG--FDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGT 93 (321)
Q Consensus 28 ~~Da~~~~~~L~~~~g--f~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~ 93 (321)
..-.+.++++|.+.+| ..+++|.+ ++. +.+.+..++..+ .++||.|++---+|..
T Consensus 70 ~~~~~~l~~~l~~~~g~~~~~~~v~~-~~g-------~~~a~~~~~~~~---~~~gd~vl~~~~~~~~ 126 (391)
T 4dq6_A 70 DSYNESIVNWLYRRHNWKIKSEWLIY-SPG-------VIPAISLLINEL---TKANDKIMIQEPVYSP 126 (391)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEE-ESC-------HHHHHHHHHHHH---SCTTCEEEECSSCCTH
T ss_pred HHHHHHHHHHHHHHhCCCCcHHHeEE-cCC-------hHHHHHHHHHHh---CCCCCEEEEcCCCCHH
Confidence 3445667777777677 56677654 442 445565666655 5689998886555543
No 56
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=28.43 E-value=1.3e+02 Score=26.82 Aligned_cols=51 Identities=18% Similarity=0.203 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCC
Q 020767 31 VLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGH 91 (321)
Q Consensus 31 a~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGH 91 (321)
...+++.|.+.+|.+++++.++++. ..+.+..++..+ +++||.|++.--+|
T Consensus 46 ~~~l~~~la~~~g~~~~~~~~~~~s-------~t~al~~~~~~l---~~~gd~Vl~~~~~~ 96 (416)
T 3isl_A 46 MNETMEMLRELFQTKNRWAYPIDGT-------SRAGIEAVLASV---IEPEDDVLIPIYGR 96 (416)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEEESC-------HHHHHHHHHHHH---CCTTCEEEEEESSH
T ss_pred HHHHHHHHHHHhCCCCCcEEEecCc-------HHHHHHHHHHHh---cCCCCEEEEecCCc
Confidence 5677888888889877666656664 345666666655 67999988876554
No 57
>4es1_A BH0342 protein; ferredoxin, nuclease, hydrolase; 1.10A {Bacillus halodurans} PDB: 4es2_A 4es3_A
Probab=28.18 E-value=79 Score=23.40 Aligned_cols=58 Identities=10% Similarity=0.065 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCC-CCEEEEEeeCCCCcc
Q 020767 30 DVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEA-GDVLLFHYSGHGTRI 95 (321)
Q Consensus 30 Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~-~D~v~~yfSGHG~~~ 95 (321)
=...+++.|++ +|...++-.+... .|.+++.+-...|..-+.+ .|.|.||.-|-....
T Consensus 23 R~~kv~k~~~~-yg~rvQ~SVFe~~-------lt~~~~~~L~~~l~~~id~~~Dsv~iy~l~~~~~~ 81 (100)
T 4es1_A 23 RLRKVAKACQN-YGQRVQNSVFECI-------VDSTQLTSLKLELTSLIDEEKDSLRIYRLGNNYKT 81 (100)
T ss_dssp HHHHHHHHHHT-TEEEEETTEEEEE-------ECHHHHHHHHHHHHHHSCTTTCEEEEEEECCCSSC
T ss_pred HHHHHHHHHHH-hChhheeeEEEEE-------cCHHHHHHHHHHHHhhcCCCCCEEEEEEcCCCccc
Confidence 45678888875 6754433222222 3566666555555555544 599999998855443
No 58
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=27.00 E-value=2.9e+02 Score=24.03 Aligned_cols=54 Identities=9% Similarity=0.091 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhcCCC-CCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCC
Q 020767 28 INDVLAMRDVIINRFGFD-PNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHG 92 (321)
Q Consensus 28 ~~Da~~~~~~L~~~~gf~-~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG 92 (321)
..-.+.+++.|.+.+|.+ +++| ++++. ..+.+..++..+ +++||.|++.--+|.
T Consensus 52 ~~~~~~~~~~la~~~g~~~~~~v-~~~~g-------~t~a~~~~~~~l---~~~gd~vl~~~~~~~ 106 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVEKGEVL-LVPSS-------GTGIMEASIRNG---VSKGGKVLVTIIGAF 106 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSSSEEE-EESSC-------HHHHHHHHHHHH---SCTTCEEEEEESSHH
T ss_pred HHHHHHHHHHHHHHhCCCCCcEE-EEeCC-------hHHHHHHHHHHh---hcCCCeEEEEcCCch
Confidence 345567788887777886 4444 34443 345566666655 568998888766664
No 59
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=26.49 E-value=1.6e+02 Score=25.83 Aligned_cols=51 Identities=16% Similarity=0.178 Sum_probs=29.7
Q ss_pred HHHHHHHHhcC--CCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCCc
Q 020767 33 AMRDVIINRFG--FDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTR 94 (321)
Q Consensus 33 ~~~~~L~~~~g--f~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~~ 94 (321)
.++++|...+| ..+++|.+ ++. ..+.+..++..+ .++||.|++.--+|...
T Consensus 66 ~la~~~~~~~~~~~~~~~i~~-t~g-------~~~a~~~~~~~~---~~~gd~vl~~~~~~~~~ 118 (377)
T 3fdb_A 66 ATAEFYADRYGYQARPEWIFP-IPD-------VVRGLYIAIDHF---TPAQSKVIVPTPAYPPF 118 (377)
T ss_dssp HHHHHHHHHHCCCCCGGGEEE-ESC-------HHHHHHHHHHHH---SCTTCCEEEEESCCTHH
T ss_pred HHHHHHHHHhCCCCCHHHEEE-eCC-------hHHHHHHHHHHh---cCCCCEEEEcCCCcHhH
Confidence 45555554455 44566654 432 345555555544 56899888877777643
No 60
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=26.24 E-value=1.4e+02 Score=25.99 Aligned_cols=43 Identities=9% Similarity=0.140 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHH
Q 020767 28 INDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMV 75 (321)
Q Consensus 28 ~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~ 75 (321)
...|+.|+++|.+.+|++.+.|.+-.... -|.+|+....+.+-
T Consensus 96 ~sEA~~m~~~l~~~~GVp~~~IllE~~S~-----nT~ENa~~s~~ll~ 138 (266)
T 3ca8_A 96 RAEATILADIAHQFWHIPHEKIWIEDQST-----NCGENARFSIALLN 138 (266)
T ss_dssp SCHHHHHHHHHHHTTCCCGGGEEEECCCC-----SHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHEEeCCCCc-----cHHHHHHHHHHHHH
Confidence 46788999999875599988875443332 48899988777554
No 61
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=24.62 E-value=53 Score=23.93 Aligned_cols=54 Identities=11% Similarity=0.206 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCCCCC-cEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeC
Q 020767 31 VLAMRDVIINRFGFDPN-HIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSG 90 (321)
Q Consensus 31 a~~~~~~L~~~~gf~~~-~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSG 90 (321)
+..+-..|+++...+++ .+.+.+|+.- .|+.+. .+..|.+.-+.+..+++.||+
T Consensus 32 v~~~~~~lRkrL~l~~~~alFlyVnn~~---~P~~d~---~~~~Ly~~~k~DGfLyv~Ys~ 86 (91)
T 4gdk_A 32 IQGLIDFIKKFLKLVASEQLFIYVNQSF---APSPDQ---EVGTLYECFGSDGKLVLHYCK 86 (91)
T ss_dssp HHHHHHHHHHHTTCCSSSCCEEEETTTB---CCCTTC---BHHHHHHHHCBTTEEEEEEES
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEECCcc---CCChhh---HHHHHHHHhCCCCEEEEEEeC
Confidence 44677888888888654 5888887631 133222 223333333467899999987
No 62
>3oq2_A Crispr-associated protein CAS2; ferredoxin fold, immune system; HET: TRS CIT; 1.35A {Desulfovibrio vulgaris}
Probab=24.32 E-value=82 Score=23.33 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCC-CCEEEEEeeCCCC
Q 020767 29 NDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEA-GDVLLFHYSGHGT 93 (321)
Q Consensus 29 ~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~-~D~v~~yfSGHG~ 93 (321)
.-...+++.|++ +|...++-..... .|.++.......|..-+.+ .|.|.||.-+-..
T Consensus 25 kr~~kv~k~l~~-yG~rvQ~SVFe~~-------lt~~~~~~L~~~L~~~id~~~Dsv~iy~l~~~~ 82 (103)
T 3oq2_A 25 RRLRRIAKACQD-YGQRVQYSVFECV-------VDPAQWAKLKHRLLSEMDKEKDCLRFYYLGANW 82 (103)
T ss_dssp HHHHHHHHHHGG-GEEEEETTEEEEE-------ECHHHHHHHHHHHHHHSCTTTCEEEEEEEETTG
T ss_pred HHHHHHHHHHHH-hCccceEEEEEEE-------cCHHHHHHHHHHHHHhcCCCCCEEEEEEeCccc
Confidence 557778888875 6744332222222 3666666666666666654 6888888877443
No 63
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=24.29 E-value=1.1e+02 Score=24.90 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=38.5
Q ss_pred CCCCCCcEEEEEEeec-CCCCCCCCcchHHHHHHHHHHHHH--hcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHh
Q 020767 1 METKGSKRIAVLVGCN-YPNTKNELHGCINDVLAMRDVIIN--RFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSK 77 (321)
Q Consensus 1 ~~~~~~~~~Al~IGi~-y~~~~~~L~~~~~Da~~~~~~L~~--~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~ 77 (321)
|-++.++.-.|.+|-. +.+... ......++++|++ ..|+.. ...++.| ..+.|.++|++++..
T Consensus 1 ~~~~~~rv~IistGdE~~~G~i~-----Dsn~~~l~~~l~~l~~~G~~v-~~~iv~D--------d~~~I~~~l~~~~~~ 66 (178)
T 2pbq_A 1 MSEKKAVIGVVTISDRASKGIYE-----DISGKAIIDYLKDVIITPFEV-EYRVIPD--------ERDLIEKTLIELADE 66 (178)
T ss_dssp ----CCEEEEEEECHHHHHTSSC-----CHHHHHHHHHHHHHBCSCCEE-EEEEECS--------CHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEEEeCCcCCCCCee-----cchHHHHHHHHHHHHhCCCEE-EEEEcCC--------CHHHHHHHHHHHHhc
Confidence 5566565555566653 222211 1233457777762 378876 5555555 478999999887652
Q ss_pred CCCCCEEEE
Q 020767 78 AEAGDVLLF 86 (321)
Q Consensus 78 ~~~~D~v~~ 86 (321)
..-|+|+.
T Consensus 67 -~~~DlVit 74 (178)
T 2pbq_A 67 -KGCSLILT 74 (178)
T ss_dssp -SCCSEEEE
T ss_pred -CCCCEEEE
Confidence 13466543
No 64
>1x3l_A Hypothetical protein PH0495; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 2.10A {Pyrococcus horikoshii}
Probab=23.85 E-value=57 Score=30.97 Aligned_cols=45 Identities=20% Similarity=0.405 Sum_probs=32.5
Q ss_pred CcEEEeeCCCCCCCCCcHHHHHHH--HHHHHHhCCCCCEEEEEeeCCCCc
Q 020767 47 NHIELLTDAPGSSVMPTGANIKAA--LDRMVSKAEAGDVLLFHYSGHGTR 94 (321)
Q Consensus 47 ~~i~~L~d~~~~~~~~T~~~I~~~--l~~l~~~~~~~D~v~~yfSGHG~~ 94 (321)
.+|.++... +..|+...+..+ +-++++.+.++|+|+|..||=|+-
T Consensus 89 ~~i~v~eA~---HPvPD~~s~~Aa~~il~~~~~l~~~Dlvl~LISGGGSA 135 (440)
T 1x3l_A 89 KRIKVIEAG---HPIPDEKSILGAKEALSILNRARENDIVFILISGGGSA 135 (440)
T ss_dssp SSSEEEEEC---SSSCCHHHHHHHHHHHHHHHHCCTTSEEEEEECTTHHH
T ss_pred CCeEEEECC---CCCCCHHHHHHHHHHHHHHhcCCCCCEEEEEecCcHHH
Confidence 456665533 345777766554 457788999999999999998765
No 65
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=22.87 E-value=2.2e+02 Score=24.95 Aligned_cols=51 Identities=10% Similarity=0.153 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCC--CCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCCc
Q 020767 33 AMRDVIINRFGF--DPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTR 94 (321)
Q Consensus 33 ~~~~~L~~~~gf--~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~~ 94 (321)
.++++|.+.+|+ ++++|.+ ++. +.+.+..++..+ .++||.|++.--+|...
T Consensus 77 ~la~~l~~~~g~~~~~~~v~~-~~G-------~~~al~~~~~~l---~~~gd~Vl~~~~~y~~~ 129 (369)
T 3cq5_A 77 ELAAYITKQTGVAVTRDNLWA-ANG-------SNEILQQLLQAF---GGPGRTALGFQPSYSMH 129 (369)
T ss_dssp HHHHHHHHHHCCCCCGGGEEE-ESH-------HHHHHHHHHHHH---CSTTCEEEEEESSCTHH
T ss_pred HHHHhhhhcccCCCChHhEEE-CCC-------hHHHHHHHHHHh---cCCCCEEEEcCCChHHH
Confidence 445555444444 4566543 432 345565566554 46899888876666543
No 66
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=21.51 E-value=1.8e+02 Score=25.49 Aligned_cols=51 Identities=8% Similarity=0.163 Sum_probs=32.3
Q ss_pred HHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCC
Q 020767 32 LAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGT 93 (321)
Q Consensus 32 ~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~ 93 (321)
..+++.|.+.+|.++++|.+. +. +.+.+..++..+ +++||.|++---+|..
T Consensus 68 ~~lr~~la~~~~~~~~~v~~~-~g-------~~~a~~~~~~~l---~~~gd~vl~~~~~~~~ 118 (365)
T 3get_A 68 IELKSTLAQKYKVQNENIIIG-AG-------SDQVIEFAIHSK---LNSKNAFLQAGVTFAM 118 (365)
T ss_dssp HHHHHHHHHHHTCCGGGEEEE-SS-------HHHHHHHHHHHH---CCTTCEEEECSSCCTH
T ss_pred HHHHHHHHHHhCCCcceEEEC-CC-------HHHHHHHHHHHH---hCCCCEEEEeCCChHH
Confidence 366777777778777777543 32 345555555554 5789999886555543
No 67
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=21.45 E-value=2.2e+02 Score=25.19 Aligned_cols=50 Identities=12% Similarity=0.055 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCC--C-CcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCC
Q 020767 33 AMRDVIINRFGFD--P-NHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGT 93 (321)
Q Consensus 33 ~~~~~L~~~~gf~--~-~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~ 93 (321)
.++++|.+.+|.+ + ++|.+ ++. ..+.+..++..+ +++||.|++---+|..
T Consensus 86 ~l~~~l~~~~g~~~~~~~~i~~-~~g-------~~~a~~~~~~~l---~~~gd~vl~~~~~~~~ 138 (407)
T 3nra_A 86 LLAPRLAAFTGAPVDARDGLII-TPG-------TQGALFLAVAAT---VARGDKVAIVQPDYFA 138 (407)
T ss_dssp HHHHHHHHHHTSCCCTTTSEEE-ESH-------HHHHHHHHHHTT---CCTTCEEEEEESCCTH
T ss_pred HHHHHHHHHhCCCCCCCCcEEE-eCC-------cHHHHHHHHHHh---CCCCCEEEEcCCcccc
Confidence 3455555545653 2 46654 332 234444444433 5789999887666653
No 68
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=21.38 E-value=4e+02 Score=23.89 Aligned_cols=54 Identities=24% Similarity=0.259 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhcC----CCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeCCCCcc
Q 020767 31 VLAMRDVIINRFG----FDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRI 95 (321)
Q Consensus 31 a~~~~~~L~~~~g----f~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSGHG~~~ 95 (321)
.+.+++++....| .++++|.+... ..+.+..++..+ .++||.|++-=-+|+...
T Consensus 92 ~~~la~~~~~~~~~~~~~~~~~v~~~~g--------g~~a~~~~~~~l---~~~gd~vl~~~p~~~~~~ 149 (435)
T 3piu_A 92 KKAMVDFMAEIRGNKVTFDPNHLVLTAG--------ATSANETFIFCL---ADPGEAVLIPTPYYPGFD 149 (435)
T ss_dssp HHHHHHHHHHHTTTSSCCCGGGEEEEEH--------HHHHHHHHHHHH---CCTTCEEEEEESCCTTHH
T ss_pred HHHHHHHHHHhhCCCCCCCHHHEEEcCC--------hHHHHHHHHHHh---cCCCCeEEECCCccccHH
Confidence 3445555543333 45667755443 334455555544 568999998877887553
No 69
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=21.37 E-value=1.9e+02 Score=25.58 Aligned_cols=52 Identities=13% Similarity=0.241 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhcC--CCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCC-CEEEEEeeCCCC
Q 020767 31 VLAMRDVIINRFG--FDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAG-DVLLFHYSGHGT 93 (321)
Q Consensus 31 a~~~~~~L~~~~g--f~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~-D~v~~yfSGHG~ 93 (321)
.+.++++|.+.+| ..+++|.+ ++. +.+.|..++..+ .++| |.|++---+|..
T Consensus 82 r~~la~~l~~~~g~~~~~~~i~~-~~g-------~~~al~~~~~~l---~~~g~d~vl~~~p~~~~ 136 (398)
T 3ele_A 82 RAAIAEFLNNTHGTHFNADNLYM-TMG-------AAASLSICFRAL---TSDAYDEFITIAPYFPE 136 (398)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEE-ESS-------HHHHHHHHHHHH---CCSTTCEEEEESSCCTH
T ss_pred HHHHHHHHHHHhCCCCChHHEEE-ccC-------HHHHHHHHHHHH---cCCCCCEEEEeCCCchh
Confidence 4456666655556 45667654 432 345555555555 5789 998886666553
No 70
>2b8n_A Glycerate kinase, putative; TM1585, glycerate kinase (EC 2.7.1.31), structural genomics, center for structural genomics, JCSG; 2.53A {Thermotoga maritima} SCOP: c.118.1.1
Probab=21.17 E-value=60 Score=30.70 Aligned_cols=76 Identities=20% Similarity=0.326 Sum_probs=48.0
Q ss_pred EEEEEEeecCCCCCCCCcchHHHHHH-HHHHHHH--------hcCC--C-CCcEEEeeCCCCCCCCCcHHHHHHH--HHH
Q 020767 8 RIAVLVGCNYPNTKNELHGCINDVLA-MRDVIIN--------RFGF--D-PNHIELLTDAPGSSVMPTGANIKAA--LDR 73 (321)
Q Consensus 8 ~~Al~IGi~y~~~~~~L~~~~~Da~~-~~~~L~~--------~~gf--~-~~~i~~L~d~~~~~~~~T~~~I~~~--l~~ 73 (321)
.+.+|||+. |.+..=|.+ +.+.+.. ++|+ + ..+|.++... ...|+...+..+ +-+
T Consensus 50 gr~~vvg~G--------KAa~~MA~aa~e~~~~~~~~GlVvt~~g~~~~~~~~i~v~eA~---HPvPD~~s~~Aa~~il~ 118 (429)
T 2b8n_A 50 DRVILVAVG--------KAAWRMAKAAYEVLGKKIRKGVVVTKYGHSEGPIDDFEIYEAG---HPVPDENTIKTTRRVLE 118 (429)
T ss_dssp CSEEEEEES--------TTHHHHHHHHHHHHGGGEEEEEEEEETTCCCSCCTTCEEEEEC---SSSCCHHHHHHHHHHHH
T ss_pred CCEEEEEec--------HHHHHHHHHHHHHhhccCccEEEEECCCcCCCCCCceEEEECC---CCCCCHHHHHHHHHHHH
Confidence 466778873 244545554 5555411 2333 2 3466666643 345777766554 457
Q ss_pred HHHhCCCCCEEEEEeeCCCCc
Q 020767 74 MVSKAEAGDVLLFHYSGHGTR 94 (321)
Q Consensus 74 l~~~~~~~D~v~~yfSGHG~~ 94 (321)
+++.+.++|+|+|..||=|+-
T Consensus 119 l~~~l~~~Dlvl~LISGGGSA 139 (429)
T 2b8n_A 119 LVDQLNENDTVLFLLSGGGSS 139 (429)
T ss_dssp HHSSCCTTCEEEEEECTTHHH
T ss_pred HHhcCCCCCEEEEEecCcHHH
Confidence 788999999999999997765
No 71
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=21.15 E-value=1.6e+02 Score=26.74 Aligned_cols=43 Identities=12% Similarity=0.104 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhcCC--CCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCC
Q 020767 29 NDVLAMRDVIINRFGF--DPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGD 82 (321)
Q Consensus 29 ~Da~~~~~~L~~~~gf--~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D 82 (321)
.=-+.++++|...+|+ .+++|.+ ++. +.+.+..++..+ +++||
T Consensus 87 ~lr~~ia~~l~~~~g~~~~~~~i~~-t~G-------~t~al~~~~~~l---~~~gd 131 (444)
T 3if2_A 87 AFIDALVGFFNRHYDWNLTSENIAL-TNG-------SQNAFFYLFNLF---GGAFV 131 (444)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEE-ESS-------HHHHHHHHHHHS---SEEEE
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEE-ecC-------cHHHHHHHHHHH---hCCCc
Confidence 3344667777655554 5677754 432 344555555544 45666
No 72
>3w1s_C Ubiquitin-like protein ATG12; ubiquitin fold, E3-like, ATG3 binding, isopeptide bond betwe Gly186 and ATG5 Lys149, ligase; 2.60A {Saccharomyces cerevisiae S288C}
Probab=21.06 E-value=57 Score=23.78 Aligned_cols=52 Identities=12% Similarity=0.202 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHHhCCCCCEEEEEeeC
Q 020767 31 VLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSG 90 (321)
Q Consensus 31 a~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~~~~~~D~v~~yfSG 90 (321)
...+-..|+++.+. +.+.+.+|+.- .|+-+.. +..|.+.-+.++.+++.||+
T Consensus 35 ~~~~v~~lRkrL~l--~alFlyVNn~f---~Ps~d~~---~~~Ly~~fk~dg~Lyv~Ys~ 86 (91)
T 3w1s_C 35 FAMVILFLKRRLKM--DHVYCYINNSF---APSPQQN---IGELWMQFKTNDELIVSYCA 86 (91)
T ss_dssp HHHHHHHHHHHHTC--SCCEEEETTTB---CCCTTSB---HHHHHHHHCBTTEEEEEEEC
T ss_pred HHHHHHHHHHhhCC--ceEEEEECCcc---CCCcccH---HHHHHHHhCCCCEEEEEEeC
Confidence 44567777777776 46888887631 1333222 23333333357899999987
No 73
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=20.15 E-value=88 Score=27.54 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=22.0
Q ss_pred CcHHHHHHHHHHHHHhCCCCCEEEEEee
Q 020767 62 PTGANIKAALDRMVSKAEAGDVLLFHYS 89 (321)
Q Consensus 62 ~T~~~I~~~l~~l~~~~~~~D~v~~yfS 89 (321)
.|++.|.+.|+.| .+++||+|+||=|
T Consensus 15 ~t~~~l~~~L~~L--Gi~~Gd~llVHsS 40 (268)
T 3ijw_A 15 NTIKTITNDLRKL--GLKKGMTVIVHSS 40 (268)
T ss_dssp BCHHHHHHHHHHH--TCCTTCEEEEEEC
T ss_pred cCHHHHHHHHHHc--CCCCCCEEEEEec
Confidence 5899999999887 6789999999754
Done!