Query 020768
Match_columns 321
No_of_seqs 140 out of 1233
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 05:00:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020768.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020768hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.9E-58 4E-63 411.0 28.2 290 15-319 1-295 (339)
2 KOG0024 Sorbitol dehydrogenase 100.0 5.2E-58 1.1E-62 396.7 26.4 304 15-319 2-307 (354)
3 PRK09880 L-idonate 5-dehydroge 100.0 3.3E-48 7.3E-53 357.1 31.9 287 15-311 2-292 (343)
4 COG1062 AdhC Zn-dependent alco 100.0 3.5E-48 7.6E-53 338.4 27.6 286 17-311 2-312 (366)
5 KOG0023 Alcohol dehydrogenase, 100.0 4E-48 8.7E-53 334.4 26.1 298 12-319 4-313 (360)
6 KOG0022 Alcohol dehydrogenase, 100.0 9E-47 2E-51 324.5 26.5 295 14-314 4-324 (375)
7 cd08239 THR_DH_like L-threonin 100.0 5.1E-46 1.1E-50 342.0 33.1 288 18-313 1-290 (339)
8 COG1063 Tdh Threonine dehydrog 100.0 1.3E-46 2.8E-51 346.0 28.8 285 18-310 1-295 (350)
9 PLN02740 Alcohol dehydrogenase 100.0 4.8E-46 1E-50 347.3 31.6 293 14-311 7-327 (381)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 2.2E-45 4.8E-50 341.8 31.9 285 18-311 1-318 (371)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.2E-44 2.6E-49 335.3 32.0 286 17-310 1-303 (358)
12 PLN02827 Alcohol dehydrogenase 100.0 1.4E-44 3.1E-49 336.8 32.3 287 16-311 11-322 (378)
13 TIGR02819 fdhA_non_GSH formald 100.0 9E-45 1.9E-49 339.1 30.8 285 17-309 2-336 (393)
14 COG0604 Qor NADPH:quinone redu 100.0 7.4E-45 1.6E-49 330.4 29.1 263 18-313 1-271 (326)
15 PLN02702 L-idonate 5-dehydroge 100.0 6.2E-44 1.3E-48 331.3 34.8 310 1-310 1-310 (364)
16 cd08230 glucose_DH Glucose deh 100.0 2.9E-44 6.4E-49 332.3 30.4 283 18-312 1-302 (355)
17 cd08301 alcohol_DH_plants Plan 100.0 6.1E-44 1.3E-48 331.9 32.6 287 17-310 2-315 (369)
18 TIGR02818 adh_III_F_hyde S-(hy 100.0 1E-43 2.2E-48 330.2 32.7 286 18-310 2-313 (368)
19 PRK10309 galactitol-1-phosphat 100.0 1.5E-43 3.1E-48 326.7 33.0 284 18-311 1-289 (347)
20 PLN02586 probable cinnamyl alc 100.0 1E-43 2.3E-48 329.0 31.3 287 14-313 9-306 (360)
21 cd08300 alcohol_DH_class_III c 100.0 4.9E-43 1.1E-47 325.7 32.5 287 17-310 2-314 (368)
22 cd08233 butanediol_DH_like (2R 100.0 5.8E-43 1.3E-47 323.2 32.4 290 18-311 1-298 (351)
23 cd08237 ribitol-5-phosphate_DH 100.0 2.2E-43 4.8E-48 324.6 28.1 276 17-314 2-285 (341)
24 TIGR03201 dearomat_had 6-hydro 100.0 6.5E-43 1.4E-47 322.6 30.8 284 21-311 2-298 (349)
25 PLN02178 cinnamyl-alcohol dehy 100.0 1.1E-42 2.3E-47 323.5 30.9 278 26-316 16-304 (375)
26 cd08277 liver_alcohol_DH_like 100.0 1.9E-42 4.2E-47 321.3 32.5 287 17-311 2-312 (365)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 6.6E-42 1.4E-46 313.3 30.2 267 27-312 13-282 (329)
28 PLN02514 cinnamyl-alcohol dehy 100.0 1.1E-40 2.4E-45 308.6 31.2 286 15-313 7-303 (357)
29 PRK10083 putative oxidoreducta 100.0 2.2E-40 4.8E-45 304.4 32.4 282 18-309 1-283 (339)
30 cd08231 MDR_TM0436_like Hypoth 100.0 2.5E-40 5.5E-45 306.7 32.0 290 19-313 2-310 (361)
31 cd08299 alcohol_DH_class_I_II_ 100.0 8.7E-40 1.9E-44 304.3 32.6 288 16-310 6-318 (373)
32 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.7E-40 3.8E-45 301.3 27.1 260 17-315 1-261 (308)
33 KOG1197 Predicted quinone oxid 100.0 9.8E-41 2.1E-45 279.2 22.2 260 13-309 4-270 (336)
34 cd08238 sorbose_phosphate_red 100.0 3.5E-39 7.5E-44 303.8 31.4 281 17-312 2-318 (410)
35 cd08296 CAD_like Cinnamyl alco 100.0 5.6E-39 1.2E-43 294.5 31.9 282 18-311 1-285 (333)
36 cd08285 NADP_ADH NADP(H)-depen 100.0 7.8E-39 1.7E-43 295.6 32.4 286 18-310 1-295 (351)
37 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.8E-38 3.9E-43 293.1 33.5 289 18-310 1-300 (350)
38 cd05285 sorbitol_DH Sorbitol d 100.0 1.8E-38 3.9E-43 292.3 32.0 290 20-311 1-291 (343)
39 cd08278 benzyl_alcohol_DH Benz 100.0 4.4E-38 9.5E-43 292.1 32.7 285 16-310 1-312 (365)
40 cd05284 arabinose_DH_like D-ar 100.0 3.6E-38 7.7E-43 289.8 31.7 287 18-311 1-291 (340)
41 cd05279 Zn_ADH1 Liver alcohol 100.0 6.5E-38 1.4E-42 291.0 32.1 283 19-309 2-310 (365)
42 cd08283 FDH_like_1 Glutathione 100.0 7E-38 1.5E-42 292.8 32.3 288 18-311 1-333 (386)
43 PRK05396 tdh L-threonine 3-deh 100.0 7.8E-38 1.7E-42 287.8 32.1 286 18-309 1-287 (341)
44 cd08246 crotonyl_coA_red croto 100.0 6.3E-38 1.4E-42 293.9 31.6 296 12-311 7-342 (393)
45 cd08286 FDH_like_ADH2 formalde 100.0 1.6E-37 3.5E-42 286.1 32.2 286 18-310 1-291 (345)
46 TIGR03366 HpnZ_proposed putati 100.0 2.1E-38 4.6E-43 283.9 25.1 233 76-314 1-249 (280)
47 cd08287 FDH_like_ADH3 formalde 100.0 3.5E-37 7.5E-42 283.8 32.1 284 18-310 1-293 (345)
48 cd08242 MDR_like Medium chain 100.0 3.6E-37 7.9E-42 280.7 31.5 269 18-309 1-269 (319)
49 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.4E-37 7.4E-42 288.0 31.8 288 18-309 29-331 (384)
50 cd08284 FDH_like_2 Glutathione 100.0 5.3E-37 1.1E-41 282.4 31.8 283 18-309 1-291 (344)
51 KOG0025 Zn2+-binding dehydroge 100.0 8.8E-38 1.9E-42 265.9 24.1 275 9-317 11-296 (354)
52 cd05278 FDH_like Formaldehyde 100.0 5.2E-37 1.1E-41 282.7 31.1 285 18-309 1-292 (347)
53 cd08232 idonate-5-DH L-idonate 100.0 6.9E-37 1.5E-41 281.2 31.4 282 22-310 2-287 (339)
54 cd08258 Zn_ADH4 Alcohol dehydr 100.0 7.6E-37 1.6E-41 277.2 30.8 289 18-316 1-296 (306)
55 cd08235 iditol_2_DH_like L-idi 100.0 1.6E-36 3.5E-41 279.0 32.9 285 18-310 1-292 (343)
56 PRK09422 ethanol-active dehydr 100.0 1.4E-36 3E-41 279.0 31.2 282 18-310 1-286 (338)
57 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.3E-36 5E-41 277.9 32.6 279 18-311 1-290 (341)
58 cd08261 Zn_ADH7 Alcohol dehydr 100.0 4.8E-36 1E-40 275.4 33.0 281 18-308 1-281 (337)
59 TIGR01751 crot-CoA-red crotony 100.0 1.9E-36 4E-41 284.4 30.7 292 14-309 4-335 (398)
60 cd08236 sugar_DH NAD(P)-depend 100.0 4.9E-36 1.1E-40 276.0 32.5 283 18-310 1-286 (343)
61 cd08240 6_hydroxyhexanoate_dh_ 100.0 3E-36 6.6E-41 278.2 31.1 289 18-312 1-301 (350)
62 cd05281 TDH Threonine dehydrog 100.0 1.3E-35 2.7E-40 273.2 32.0 285 18-309 1-287 (341)
63 cd08279 Zn_ADH_class_III Class 100.0 1.2E-35 2.6E-40 275.6 31.8 284 18-309 1-308 (363)
64 cd05283 CAD1 Cinnamyl alcohol 100.0 8.8E-36 1.9E-40 273.8 30.2 282 19-313 1-291 (337)
65 cd08291 ETR_like_1 2-enoyl thi 100.0 7.6E-36 1.6E-40 272.8 29.1 260 18-313 1-272 (324)
66 cd08282 PFDH_like Pseudomonas 100.0 1.8E-35 4E-40 275.5 32.0 283 18-310 1-323 (375)
67 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.1E-35 4.6E-40 272.0 32.0 284 18-310 1-292 (345)
68 PRK13771 putative alcohol dehy 100.0 7.8E-36 1.7E-40 273.5 28.6 278 18-311 1-283 (334)
69 cd08234 threonine_DH_like L-th 100.0 3.3E-35 7.2E-40 269.3 32.1 282 18-310 1-284 (334)
70 cd08297 CAD3 Cinnamyl alcohol 100.0 4.3E-35 9.4E-40 269.4 32.4 285 18-310 1-291 (341)
71 cd08263 Zn_ADH10 Alcohol dehyd 100.0 4.3E-35 9.3E-40 272.3 32.3 284 18-309 1-313 (367)
72 TIGR00692 tdh L-threonine 3-de 100.0 5E-35 1.1E-39 269.1 31.2 277 27-309 9-286 (340)
73 cd08264 Zn_ADH_like2 Alcohol d 100.0 3.8E-35 8.3E-40 268.0 29.6 274 18-310 1-279 (325)
74 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 7.5E-35 1.6E-39 267.1 31.6 285 18-311 1-289 (338)
75 cd08292 ETR_like_2 2-enoyl thi 100.0 1.7E-34 3.7E-39 263.3 30.6 259 18-312 1-266 (324)
76 cd08298 CAD2 Cinnamyl alcohol 100.0 5.3E-34 1.2E-38 260.9 30.5 274 18-311 1-282 (329)
77 cd08259 Zn_ADH5 Alcohol dehydr 100.0 9.5E-34 2.1E-38 259.0 31.8 278 18-310 1-282 (332)
78 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.3E-33 2.9E-38 258.4 31.2 286 18-312 1-293 (342)
79 cd08245 CAD Cinnamyl alcohol d 100.0 1.9E-33 4.2E-38 257.3 30.3 281 19-313 1-285 (330)
80 PLN03154 putative allyl alcoho 100.0 2.2E-33 4.8E-38 258.9 30.7 258 15-312 6-291 (348)
81 cd08274 MDR9 Medium chain dehy 100.0 2.7E-33 5.8E-38 258.3 29.7 278 18-313 1-302 (350)
82 cd08293 PTGR2 Prostaglandin re 100.0 1.5E-33 3.3E-38 259.6 27.3 225 27-287 21-256 (345)
83 cd08295 double_bond_reductase_ 100.0 5.7E-33 1.2E-37 255.2 29.6 245 27-310 19-282 (338)
84 cd08294 leukotriene_B4_DH_like 100.0 7.1E-33 1.5E-37 253.3 28.9 249 17-312 2-275 (329)
85 TIGR02825 B4_12hDH leukotriene 100.0 8.5E-33 1.8E-37 252.7 28.5 240 25-310 15-269 (325)
86 cd05188 MDR Medium chain reduc 100.0 2.1E-32 4.6E-37 242.5 28.5 261 43-316 1-264 (271)
87 cd08290 ETR 2-enoyl thioester 100.0 1.6E-32 3.5E-37 252.3 28.7 264 18-313 1-280 (341)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.9E-32 4.2E-37 251.2 28.4 246 26-309 14-268 (336)
89 cd08244 MDR_enoyl_red Possible 100.0 1.5E-31 3.2E-36 243.8 30.3 262 18-311 1-268 (324)
90 PTZ00354 alcohol dehydrogenase 100.0 3.9E-31 8.4E-36 241.9 29.7 259 17-310 1-267 (334)
91 cd08269 Zn_ADH9 Alcohol dehydr 100.0 5.2E-31 1.1E-35 239.0 29.4 250 24-309 2-254 (312)
92 cd08276 MDR7 Medium chain dehy 100.0 1.2E-30 2.7E-35 238.7 31.5 279 18-310 1-285 (336)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 6.7E-31 1.4E-35 239.6 27.7 259 18-310 1-269 (325)
94 cd08289 MDR_yhfp_like Yhfp put 100.0 1.3E-30 2.8E-35 238.0 28.2 258 18-309 1-268 (326)
95 cd08270 MDR4 Medium chain dehy 100.0 2.2E-30 4.8E-35 234.2 28.7 244 18-311 1-251 (305)
96 TIGR02823 oxido_YhdH putative 100.0 3.8E-30 8.1E-35 234.8 28.9 257 19-310 1-267 (323)
97 cd05282 ETR_like 2-enoyl thioe 100.0 3.6E-30 7.9E-35 234.5 28.2 250 28-313 13-266 (323)
98 cd08252 AL_MDR Arginate lyase 100.0 5.7E-30 1.2E-34 234.7 29.6 256 18-310 1-271 (336)
99 cd08250 Mgc45594_like Mgc45594 100.0 9.5E-30 2.1E-34 232.7 30.9 255 17-311 1-273 (329)
100 PRK10754 quinone oxidoreductas 100.0 3.9E-30 8.5E-35 235.1 28.1 247 17-299 1-254 (327)
101 cd08249 enoyl_reductase_like e 100.0 2.8E-30 6.1E-35 237.5 25.8 241 18-289 1-258 (339)
102 cd08243 quinone_oxidoreductase 100.0 2.9E-29 6.4E-34 227.9 30.0 257 18-310 1-268 (320)
103 cd05276 p53_inducible_oxidored 100.0 3.2E-29 7E-34 227.1 28.7 259 18-312 1-266 (323)
104 cd08253 zeta_crystallin Zeta-c 100.0 5.4E-29 1.2E-33 226.0 29.5 262 18-310 1-268 (325)
105 cd08288 MDR_yhdh Yhdh putative 100.0 1.1E-28 2.4E-33 225.1 29.1 257 18-309 1-267 (324)
106 COG2130 Putative NADP-dependen 100.0 4.4E-29 9.6E-34 214.9 24.6 243 26-310 24-281 (340)
107 cd08248 RTN4I1 Human Reticulon 100.0 9.6E-29 2.1E-33 227.9 27.0 235 18-287 1-259 (350)
108 cd05288 PGDH Prostaglandin deh 100.0 2.2E-28 4.8E-33 223.5 29.0 246 27-312 18-277 (329)
109 KOG1198 Zinc-binding oxidoredu 100.0 3.7E-29 7.9E-34 228.0 21.4 226 28-288 19-258 (347)
110 cd08272 MDR6 Medium chain dehy 100.0 6E-28 1.3E-32 219.6 28.9 257 18-310 1-263 (326)
111 cd05286 QOR2 Quinone oxidoredu 100.0 1.3E-27 2.9E-32 216.2 29.3 245 27-309 12-260 (320)
112 TIGR02824 quinone_pig3 putativ 100.0 1.4E-27 3E-32 216.9 29.4 258 18-311 1-265 (325)
113 cd08271 MDR5 Medium chain dehy 100.0 2.4E-27 5.2E-32 215.8 28.5 235 18-287 1-241 (325)
114 cd08268 MDR2 Medium chain dehy 100.0 3.9E-27 8.5E-32 214.2 29.9 262 18-310 1-269 (328)
115 cd08251 polyketide_synthase po 100.0 3.7E-27 8E-32 212.2 28.3 219 36-288 2-222 (303)
116 cd08273 MDR8 Medium chain dehy 100.0 3.2E-27 7E-32 215.9 28.2 231 18-289 1-237 (331)
117 cd08241 QOR1 Quinone oxidoredu 100.0 8.5E-27 1.8E-31 211.4 28.6 256 18-310 1-264 (323)
118 cd08247 AST1_like AST1 is a cy 100.0 5.9E-27 1.3E-31 216.4 28.0 240 19-285 2-259 (352)
119 cd05289 MDR_like_2 alcohol deh 100.0 1.8E-26 4E-31 208.1 26.8 251 18-308 1-257 (309)
120 cd08275 MDR3 Medium chain dehy 100.0 1.4E-25 3E-30 205.2 29.5 254 19-310 1-278 (337)
121 cd05195 enoyl_red enoyl reduct 100.0 1.1E-25 2.3E-30 200.8 26.4 228 42-310 1-235 (293)
122 cd08267 MDR1 Medium chain dehy 99.9 1.6E-25 3.4E-30 203.3 26.1 226 30-289 15-244 (319)
123 smart00829 PKS_ER Enoylreducta 99.9 4.9E-25 1.1E-29 196.4 25.7 223 46-310 2-231 (288)
124 cd08255 2-desacetyl-2-hydroxye 99.9 1.5E-24 3.1E-29 193.7 22.2 199 71-312 18-217 (277)
125 PF08240 ADH_N: Alcohol dehydr 99.9 6.7E-24 1.5E-28 162.9 9.6 109 41-152 1-109 (109)
126 KOG1196 Predicted NAD-dependen 99.9 1.6E-21 3.4E-26 167.8 24.9 240 30-310 25-284 (343)
127 KOG1202 Animal-type fatty acid 99.9 1.4E-21 3.1E-26 191.1 13.3 242 27-313 1427-1684(2376)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 1.8E-17 3.9E-22 131.1 12.5 122 192-318 1-123 (130)
129 PRK09424 pntA NAD(P) transhydr 99.4 7.5E-12 1.6E-16 119.2 15.7 132 178-310 161-314 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.1 1.1E-09 2.4E-14 101.9 13.9 115 179-312 199-314 (413)
131 TIGR00561 pntA NAD(P) transhyd 98.7 3.8E-07 8.2E-12 87.1 14.2 129 180-309 162-312 (511)
132 PRK05476 S-adenosyl-L-homocyst 98.5 2.7E-06 5.9E-11 79.7 13.2 104 170-290 198-304 (425)
133 PRK00517 prmA ribosomal protei 98.4 1.2E-05 2.6E-10 70.8 14.7 133 137-289 78-217 (250)
134 PRK08306 dipicolinate synthase 98.4 1.6E-05 3.5E-10 71.6 15.7 111 181-307 151-261 (296)
135 cd05213 NAD_bind_Glutamyl_tRNA 98.3 1.7E-06 3.7E-11 78.6 8.0 108 147-267 139-251 (311)
136 TIGR01035 hemA glutamyl-tRNA r 98.3 3.4E-08 7.4E-13 93.2 -4.0 161 75-267 88-253 (417)
137 TIGR00936 ahcY adenosylhomocys 98.3 1.8E-05 4E-10 73.8 13.9 101 179-298 192-293 (406)
138 PRK12771 putative glutamate sy 98.1 3.2E-06 6.9E-11 83.2 5.3 100 178-285 133-253 (564)
139 PLN02494 adenosylhomocysteinas 98.1 3.9E-05 8.5E-10 72.4 11.6 92 180-288 252-344 (477)
140 PRK11873 arsM arsenite S-adeno 98.0 4.5E-05 9.8E-10 67.9 9.6 104 175-287 71-185 (272)
141 PRK08324 short chain dehydroge 98.0 7.8E-05 1.7E-09 75.1 12.4 142 136-288 385-560 (681)
142 COG2518 Pcm Protein-L-isoaspar 98.0 9.5E-05 2.1E-09 62.3 10.5 104 170-285 61-169 (209)
143 TIGR00518 alaDH alanine dehydr 97.9 0.00021 4.6E-09 66.4 12.6 118 181-308 166-297 (370)
144 PRK05993 short chain dehydroge 97.8 0.0004 8.7E-09 61.9 13.0 106 181-288 3-137 (277)
145 PRK00045 hemA glutamyl-tRNA re 97.8 2.6E-05 5.7E-10 73.9 5.2 161 75-267 90-255 (423)
146 TIGR02853 spore_dpaA dipicolin 97.8 0.0005 1.1E-08 61.7 12.4 110 181-306 150-259 (287)
147 COG0300 DltE Short-chain dehyd 97.7 0.00095 2.1E-08 58.7 13.2 115 180-295 4-152 (265)
148 PRK00377 cbiT cobalt-precorrin 97.7 0.00077 1.7E-08 57.1 12.4 104 174-285 33-145 (198)
149 KOG1209 1-Acyl dihydroxyaceton 97.7 0.00072 1.6E-08 56.7 11.3 115 181-297 6-150 (289)
150 PRK05786 fabG 3-ketoacyl-(acyl 97.7 0.0014 3E-08 56.7 14.0 106 181-288 4-138 (238)
151 PTZ00075 Adenosylhomocysteinas 97.6 0.00046 9.9E-09 65.4 10.1 93 179-288 251-344 (476)
152 PRK13943 protein-L-isoaspartat 97.6 0.0013 2.9E-08 59.8 12.1 103 173-284 72-179 (322)
153 PRK06182 short chain dehydroge 97.5 0.0023 4.9E-08 56.8 13.5 81 181-264 2-84 (273)
154 COG4221 Short-chain alcohol de 97.5 0.0039 8.3E-08 53.7 13.7 110 181-293 5-147 (246)
155 TIGR00406 prmA ribosomal prote 97.5 0.0016 3.4E-08 58.6 11.6 128 147-287 127-261 (288)
156 COG2242 CobL Precorrin-6B meth 97.5 0.0016 3.5E-08 53.7 10.4 104 175-287 28-137 (187)
157 PRK05693 short chain dehydroge 97.5 0.0035 7.6E-08 55.6 13.5 79 183-264 2-82 (274)
158 KOG1205 Predicted dehydrogenas 97.4 0.0048 1E-07 54.7 13.2 114 181-296 11-160 (282)
159 PRK12742 oxidoreductase; Provi 97.4 0.0042 9.2E-08 53.6 12.7 102 181-288 5-134 (237)
160 PF01488 Shikimate_DH: Shikima 97.3 0.0011 2.4E-08 52.5 7.9 95 181-287 11-111 (135)
161 PF11017 DUF2855: Protein of u 97.3 0.017 3.7E-07 51.9 16.2 182 83-289 39-235 (314)
162 TIGR02469 CbiT precorrin-6Y C5 97.3 0.0092 2E-07 45.8 12.5 103 175-285 13-122 (124)
163 PF01135 PCMT: Protein-L-isoas 97.3 0.0013 2.8E-08 56.1 7.8 104 171-284 62-171 (209)
164 COG3967 DltE Short-chain dehyd 97.2 0.0033 7.2E-08 52.6 9.5 82 181-265 4-89 (245)
165 PRK13942 protein-L-isoaspartat 97.2 0.01 2.3E-07 50.8 12.8 103 173-284 68-175 (212)
166 PRK08261 fabG 3-ketoacyl-(acyl 97.2 0.012 2.6E-07 56.3 14.4 104 181-287 209-344 (450)
167 PRK08017 oxidoreductase; Provi 97.1 0.0046 1E-07 54.1 10.6 80 183-264 3-84 (256)
168 PRK11705 cyclopropane fatty ac 97.1 0.0067 1.5E-07 56.8 12.0 99 175-285 161-267 (383)
169 TIGR00438 rrmJ cell division p 97.1 0.012 2.6E-07 49.2 12.6 104 177-287 28-148 (188)
170 COG2230 Cfa Cyclopropane fatty 97.1 0.02 4.3E-07 50.8 14.2 118 174-303 65-195 (283)
171 PRK12828 short chain dehydroge 97.1 0.017 3.7E-07 49.7 13.4 81 181-264 6-92 (239)
172 PRK07825 short chain dehydroge 97.1 0.023 4.9E-07 50.3 14.2 81 182-264 5-88 (273)
173 PRK07326 short chain dehydroge 97.0 0.017 3.7E-07 49.8 13.0 82 181-264 5-92 (237)
174 PLN03209 translocon at the inn 97.0 0.01 2.3E-07 57.8 12.6 46 175-221 73-119 (576)
175 PF13460 NAD_binding_10: NADH( 97.0 0.013 2.8E-07 48.5 11.7 93 185-288 1-100 (183)
176 PRK07814 short chain dehydroge 97.0 0.027 5.9E-07 49.6 14.1 82 181-264 9-97 (263)
177 PRK06505 enoyl-(acyl carrier p 97.0 0.025 5.4E-07 50.3 13.9 106 181-288 6-148 (271)
178 PRK08339 short chain dehydroge 97.0 0.023 4.9E-07 50.2 13.5 105 181-288 7-146 (263)
179 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0058 1.3E-07 50.8 9.1 88 181-285 35-127 (178)
180 PRK07806 short chain dehydroge 97.0 0.03 6.6E-07 48.6 14.2 104 181-286 5-135 (248)
181 PRK07109 short chain dehydroge 97.0 0.023 5.1E-07 52.1 13.9 107 181-289 7-147 (334)
182 TIGR00080 pimt protein-L-isoas 96.9 0.018 3.9E-07 49.3 12.1 104 173-285 69-177 (215)
183 PRK06180 short chain dehydroge 96.9 0.028 6.1E-07 49.9 13.7 82 181-264 3-88 (277)
184 PRK08265 short chain dehydroge 96.9 0.028 6E-07 49.5 13.5 105 181-287 5-138 (261)
185 PF12847 Methyltransf_18: Meth 96.9 0.0075 1.6E-07 45.6 8.6 93 181-283 1-109 (112)
186 PF02353 CMAS: Mycolic acid cy 96.9 0.0026 5.7E-08 56.6 6.8 100 174-285 55-166 (273)
187 PRK13944 protein-L-isoaspartat 96.9 0.016 3.5E-07 49.3 11.5 103 174-285 65-173 (205)
188 PRK12939 short chain dehydroge 96.9 0.03 6.5E-07 48.6 13.5 82 181-264 6-94 (250)
189 PRK06603 enoyl-(acyl carrier p 96.9 0.04 8.8E-07 48.5 14.4 82 181-264 7-96 (260)
190 PRK08267 short chain dehydroge 96.9 0.022 4.7E-07 50.0 12.7 81 183-264 2-87 (260)
191 COG1748 LYS9 Saccharopine dehy 96.9 0.016 3.4E-07 53.9 11.9 100 183-290 2-104 (389)
192 PRK08415 enoyl-(acyl carrier p 96.9 0.04 8.7E-07 49.0 14.3 106 181-288 4-146 (274)
193 PRK07533 enoyl-(acyl carrier p 96.9 0.039 8.4E-07 48.5 14.0 106 181-288 9-151 (258)
194 PRK07502 cyclohexadienyl dehyd 96.9 0.015 3.2E-07 52.8 11.5 92 183-287 7-102 (307)
195 PRK06139 short chain dehydroge 96.8 0.014 3E-07 53.6 11.2 82 181-264 6-94 (330)
196 PRK14967 putative methyltransf 96.8 0.0069 1.5E-07 52.3 8.7 100 174-285 29-159 (223)
197 PF13602 ADH_zinc_N_2: Zinc-bi 96.8 0.00031 6.6E-09 54.8 0.0 50 225-286 1-52 (127)
198 PRK05872 short chain dehydroge 96.8 0.026 5.6E-07 50.8 12.6 81 181-264 8-95 (296)
199 PRK08618 ornithine cyclodeamin 96.8 0.05 1.1E-06 49.8 14.5 107 175-296 120-233 (325)
200 PF00670 AdoHcyase_NAD: S-aden 96.8 0.032 6.9E-07 45.3 11.5 102 178-298 19-121 (162)
201 PRK06500 short chain dehydroge 96.8 0.048 1E-06 47.3 13.7 82 181-264 5-90 (249)
202 PRK07231 fabG 3-ketoacyl-(acyl 96.8 0.058 1.3E-06 46.8 14.1 82 181-264 4-91 (251)
203 PRK06057 short chain dehydroge 96.8 0.019 4.1E-07 50.3 11.0 81 181-264 6-89 (255)
204 PRK06079 enoyl-(acyl carrier p 96.8 0.044 9.5E-07 48.0 13.4 107 181-289 6-147 (252)
205 PRK09072 short chain dehydroge 96.7 0.028 6E-07 49.5 12.1 81 181-264 4-90 (263)
206 PRK04148 hypothetical protein; 96.7 0.051 1.1E-06 42.7 11.9 113 180-304 15-128 (134)
207 PRK07832 short chain dehydroge 96.7 0.06 1.3E-06 47.7 14.1 78 184-264 2-88 (272)
208 PRK07576 short chain dehydroge 96.7 0.066 1.4E-06 47.2 14.3 81 181-263 8-95 (264)
209 PRK06484 short chain dehydroge 96.7 0.05 1.1E-06 53.0 14.6 107 180-288 267-403 (520)
210 TIGR02356 adenyl_thiF thiazole 96.7 0.032 6.9E-07 47.4 11.4 95 181-280 20-137 (202)
211 PRK09186 flagellin modificatio 96.7 0.063 1.4E-06 46.8 13.8 81 181-263 3-92 (256)
212 PRK07060 short chain dehydroge 96.7 0.021 4.6E-07 49.4 10.5 78 181-264 8-87 (245)
213 PRK07062 short chain dehydroge 96.6 0.074 1.6E-06 46.8 14.1 82 181-264 7-97 (265)
214 PRK08159 enoyl-(acyl carrier p 96.6 0.084 1.8E-06 46.9 14.3 107 180-288 8-151 (272)
215 PRK06949 short chain dehydroge 96.6 0.027 5.9E-07 49.2 11.0 82 181-264 8-96 (258)
216 PF00106 adh_short: short chai 96.6 0.05 1.1E-06 44.1 11.8 81 183-265 1-91 (167)
217 PRK12823 benD 1,6-dihydroxycyc 96.6 0.064 1.4E-06 47.0 13.3 81 181-264 7-94 (260)
218 TIGR01318 gltD_gamma_fam gluta 96.6 0.0061 1.3E-07 58.7 7.1 78 181-266 140-238 (467)
219 PRK08217 fabG 3-ketoacyl-(acyl 96.5 0.039 8.4E-07 47.9 11.5 81 181-263 4-91 (253)
220 PRK06198 short chain dehydroge 96.5 0.082 1.8E-06 46.2 13.6 83 181-264 5-94 (260)
221 PRK07984 enoyl-(acyl carrier p 96.5 0.091 2E-06 46.4 13.9 81 181-263 5-93 (262)
222 PRK06463 fabG 3-ketoacyl-(acyl 96.5 0.027 5.9E-07 49.3 10.5 81 181-264 6-89 (255)
223 PRK07904 short chain dehydroge 96.5 0.059 1.3E-06 47.3 12.6 83 179-264 5-97 (253)
224 PRK00107 gidB 16S rRNA methylt 96.5 0.031 6.8E-07 46.8 10.3 99 179-287 43-147 (187)
225 PRK06128 oxidoreductase; Provi 96.5 0.084 1.8E-06 47.6 13.8 106 181-288 54-194 (300)
226 PRK06200 2,3-dihydroxy-2,3-dih 96.5 0.036 7.7E-07 48.8 11.2 82 181-264 5-90 (263)
227 PRK05866 short chain dehydroge 96.5 0.036 7.9E-07 49.8 11.4 82 181-264 39-127 (293)
228 PRK08085 gluconate 5-dehydroge 96.5 0.11 2.5E-06 45.3 14.2 82 181-264 8-96 (254)
229 PRK06179 short chain dehydroge 96.5 0.065 1.4E-06 47.3 12.6 79 181-264 3-83 (270)
230 PRK09242 tropinone reductase; 96.5 0.15 3.2E-06 44.6 14.8 82 181-264 8-98 (257)
231 PRK07831 short chain dehydroge 96.4 0.042 9.1E-07 48.3 11.2 84 179-264 14-107 (262)
232 TIGR03325 BphB_TodD cis-2,3-di 96.4 0.034 7.4E-07 48.9 10.6 81 181-263 4-88 (262)
233 PRK13394 3-hydroxybutyrate deh 96.4 0.09 1.9E-06 46.0 13.3 82 181-264 6-94 (262)
234 PRK05884 short chain dehydroge 96.4 0.086 1.9E-06 45.3 12.8 75 184-263 2-78 (223)
235 PRK12429 3-hydroxybutyrate deh 96.4 0.079 1.7E-06 46.1 12.8 82 181-264 3-91 (258)
236 PRK12829 short chain dehydroge 96.4 0.038 8.3E-07 48.4 10.8 85 179-265 8-97 (264)
237 PRK08177 short chain dehydroge 96.4 0.03 6.6E-07 48.0 9.9 78 183-264 2-81 (225)
238 PRK08594 enoyl-(acyl carrier p 96.4 0.094 2E-06 46.1 13.3 107 181-289 6-151 (257)
239 PF01262 AlaDh_PNT_C: Alanine 96.4 0.015 3.3E-07 47.8 7.7 100 182-286 20-140 (168)
240 PRK06841 short chain dehydroge 96.4 0.044 9.5E-07 47.8 11.1 82 181-264 14-99 (255)
241 PRK12937 short chain dehydroge 96.4 0.11 2.4E-06 44.9 13.5 105 181-287 4-141 (245)
242 PRK07402 precorrin-6B methylas 96.4 0.12 2.6E-06 43.5 13.2 106 174-287 33-144 (196)
243 PRK08263 short chain dehydroge 96.4 0.081 1.7E-06 46.9 12.7 81 182-264 3-87 (275)
244 PRK07677 short chain dehydroge 96.4 0.039 8.5E-07 48.2 10.6 81 182-264 1-88 (252)
245 PRK06398 aldose dehydrogenase; 96.4 0.073 1.6E-06 46.7 12.3 76 181-264 5-82 (258)
246 TIGR01832 kduD 2-deoxy-D-gluco 96.4 0.057 1.2E-06 46.9 11.4 82 181-264 4-90 (248)
247 PRK05653 fabG 3-ketoacyl-(acyl 96.3 0.13 2.9E-06 44.2 13.7 81 181-264 4-92 (246)
248 PRK08862 short chain dehydroge 96.3 0.045 9.6E-07 47.3 10.6 82 181-263 4-92 (227)
249 PRK10538 malonic semialdehyde 96.3 0.13 2.9E-06 44.7 13.7 79 184-264 2-84 (248)
250 cd05311 NAD_bind_2_malic_enz N 96.3 0.15 3.2E-06 44.1 13.5 99 172-285 14-128 (226)
251 PRK13656 trans-2-enoyl-CoA red 96.3 0.092 2E-06 48.8 12.6 83 180-265 39-142 (398)
252 PRK06101 short chain dehydroge 96.3 0.1 2.2E-06 45.2 12.6 42 183-225 2-44 (240)
253 PRK05867 short chain dehydroge 96.3 0.049 1.1E-06 47.6 10.6 82 181-264 8-96 (253)
254 PRK12550 shikimate 5-dehydroge 96.3 0.037 8.1E-07 49.2 9.8 99 172-287 112-218 (272)
255 PRK07774 short chain dehydroge 96.3 0.045 9.8E-07 47.6 10.3 82 181-264 5-93 (250)
256 PRK07985 oxidoreductase; Provi 96.3 0.14 3E-06 46.1 13.7 105 181-287 48-187 (294)
257 CHL00194 ycf39 Ycf39; Provisio 96.3 0.071 1.5E-06 48.5 11.9 95 184-287 2-111 (317)
258 TIGR03840 TMPT_Se_Te thiopurin 96.3 0.065 1.4E-06 45.9 10.9 105 179-286 32-153 (213)
259 PRK08063 enoyl-(acyl carrier p 96.2 0.13 2.7E-06 44.7 13.0 83 181-264 3-92 (250)
260 PRK06484 short chain dehydroge 96.2 0.14 3E-06 50.0 14.5 82 181-264 4-89 (520)
261 PRK08317 hypothetical protein; 96.2 0.082 1.8E-06 45.5 11.7 104 174-285 12-124 (241)
262 PRK00811 spermidine synthase; 96.2 0.035 7.6E-07 49.8 9.4 99 180-285 75-191 (283)
263 COG4122 Predicted O-methyltran 96.2 0.14 3E-06 43.8 12.5 106 177-287 55-168 (219)
264 cd01065 NAD_bind_Shikimate_DH 96.2 0.044 9.6E-07 44.0 9.2 104 173-288 9-119 (155)
265 PRK00312 pcm protein-L-isoaspa 96.2 0.13 2.7E-06 43.9 12.5 102 174-286 71-176 (212)
266 PRK12747 short chain dehydroge 96.2 0.17 3.7E-06 44.0 13.6 108 181-289 3-148 (252)
267 PRK08628 short chain dehydroge 96.2 0.041 8.9E-07 48.1 9.7 82 181-264 6-93 (258)
268 PRK08703 short chain dehydroge 96.2 0.059 1.3E-06 46.6 10.5 83 181-264 5-97 (239)
269 cd01075 NAD_bind_Leu_Phe_Val_D 96.2 0.094 2E-06 44.4 11.3 46 181-227 27-73 (200)
270 PRK07024 short chain dehydroge 96.2 0.056 1.2E-06 47.4 10.3 81 182-264 2-88 (257)
271 PRK06124 gluconate 5-dehydroge 96.2 0.25 5.4E-06 43.1 14.5 82 181-264 10-98 (256)
272 PRK09291 short chain dehydroge 96.1 0.083 1.8E-06 46.1 11.4 75 182-263 2-82 (257)
273 PRK06701 short chain dehydroge 96.1 0.2 4.4E-06 44.9 14.1 106 181-288 45-184 (290)
274 PRK03369 murD UDP-N-acetylmura 96.1 0.037 8E-07 53.6 9.7 74 178-265 8-81 (488)
275 PRK06483 dihydromonapterin red 96.1 0.062 1.3E-06 46.4 10.3 80 182-264 2-84 (236)
276 PRK06196 oxidoreductase; Provi 96.1 0.054 1.2E-06 49.2 10.3 82 181-264 25-109 (315)
277 PRK04457 spermidine synthase; 96.1 0.091 2E-06 46.5 11.3 97 180-284 65-176 (262)
278 PF03446 NAD_binding_2: NAD bi 96.1 0.11 2.4E-06 42.4 11.1 107 183-305 2-115 (163)
279 PLN02366 spermidine synthase 96.1 0.057 1.2E-06 48.9 10.2 100 180-285 90-206 (308)
280 PRK08261 fabG 3-ketoacyl-(acyl 96.1 0.022 4.7E-07 54.5 8.0 94 176-289 28-127 (450)
281 PRK08589 short chain dehydroge 96.1 0.074 1.6E-06 47.1 10.9 82 181-264 5-92 (272)
282 PF03435 Saccharop_dh: Sacchar 96.1 0.052 1.1E-06 50.9 10.3 93 185-284 1-97 (386)
283 PF06325 PrmA: Ribosomal prote 96.1 0.045 9.7E-07 49.2 9.2 146 145-306 127-279 (295)
284 PRK07453 protochlorophyllide o 96.1 0.078 1.7E-06 48.2 11.1 81 181-263 5-92 (322)
285 PRK07478 short chain dehydroge 96.0 0.089 1.9E-06 45.9 11.0 82 181-264 5-93 (254)
286 PLN02780 ketoreductase/ oxidor 96.0 0.055 1.2E-06 49.4 9.9 80 181-264 52-142 (320)
287 cd01483 E1_enzyme_family Super 96.0 0.13 2.9E-06 40.8 11.0 95 184-284 1-119 (143)
288 PRK07370 enoyl-(acyl carrier p 96.0 0.22 4.8E-06 43.7 13.5 106 181-288 5-150 (258)
289 PRK07523 gluconate 5-dehydroge 96.0 0.089 1.9E-06 45.9 10.9 82 181-264 9-97 (255)
290 COG2519 GCD14 tRNA(1-methylade 96.0 0.07 1.5E-06 46.3 9.7 104 173-285 86-195 (256)
291 COG2910 Putative NADH-flavin r 96.0 0.08 1.7E-06 43.7 9.4 95 184-289 2-108 (211)
292 PRK06077 fabG 3-ketoacyl-(acyl 96.0 0.23 5.1E-06 43.0 13.5 107 182-289 6-144 (252)
293 PRK12809 putative oxidoreducta 96.0 0.029 6.3E-07 56.2 8.5 77 181-265 309-406 (639)
294 PRK06194 hypothetical protein; 96.0 0.097 2.1E-06 46.6 11.2 82 181-264 5-93 (287)
295 TIGR01809 Shik-DH-AROM shikima 96.0 0.028 6E-07 50.4 7.5 76 181-265 124-201 (282)
296 PRK07454 short chain dehydroge 96.0 0.11 2.4E-06 44.8 11.3 83 180-264 4-93 (241)
297 TIGR01470 cysG_Nterm siroheme 96.0 0.18 3.9E-06 42.9 12.1 93 181-286 8-101 (205)
298 PRK08642 fabG 3-ketoacyl-(acyl 96.0 0.071 1.5E-06 46.4 10.1 82 182-263 5-90 (253)
299 PRK05854 short chain dehydroge 96.0 0.099 2.1E-06 47.5 11.3 82 181-264 13-103 (313)
300 PRK08340 glucose-1-dehydrogena 95.9 0.1 2.2E-06 45.7 11.1 79 184-264 2-86 (259)
301 PRK08643 acetoin reductase; Va 95.9 0.1 2.2E-06 45.5 10.9 81 182-264 2-89 (256)
302 PRK08220 2,3-dihydroxybenzoate 95.9 0.23 4.9E-06 43.2 13.0 77 181-264 7-86 (252)
303 TIGR00417 speE spermidine synt 95.9 0.16 3.4E-06 45.2 12.0 99 180-285 71-186 (270)
304 PRK07063 short chain dehydroge 95.9 0.1 2.2E-06 45.7 10.8 82 181-264 6-96 (260)
305 PRK12746 short chain dehydroge 95.9 0.19 4E-06 43.8 12.3 83 181-264 5-100 (254)
306 PRK07340 ornithine cyclodeamin 95.9 0.095 2.1E-06 47.5 10.6 108 174-296 117-229 (304)
307 PF01408 GFO_IDH_MocA: Oxidore 95.8 0.17 3.7E-06 38.6 10.7 89 184-286 2-93 (120)
308 PRK05875 short chain dehydroge 95.8 0.12 2.5E-06 45.8 11.1 82 181-264 6-96 (276)
309 KOG1201 Hydroxysteroid 17-beta 95.8 0.073 1.6E-06 47.3 9.3 108 180-290 36-177 (300)
310 PRK12481 2-deoxy-D-gluconate 3 95.8 0.13 2.7E-06 45.0 11.1 82 181-264 7-93 (251)
311 cd01487 E1_ThiF_like E1_ThiF_l 95.8 0.11 2.5E-06 42.9 10.1 96 184-285 1-120 (174)
312 PRK12384 sorbitol-6-phosphate 95.8 0.12 2.6E-06 45.2 10.9 81 182-264 2-91 (259)
313 PRK05717 oxidoreductase; Valid 95.8 0.13 2.8E-06 45.0 11.1 82 181-264 9-94 (255)
314 PRK07688 thiamine/molybdopteri 95.8 0.12 2.7E-06 47.5 11.2 34 182-215 24-57 (339)
315 PRK07890 short chain dehydroge 95.8 0.13 2.8E-06 44.8 11.0 82 181-264 4-92 (258)
316 PRK06953 short chain dehydroge 95.8 0.087 1.9E-06 45.0 9.7 77 183-264 2-80 (222)
317 PLN02253 xanthoxin dehydrogena 95.8 0.12 2.6E-06 45.9 10.9 82 181-264 17-104 (280)
318 PRK07035 short chain dehydroge 95.8 0.13 2.8E-06 44.8 10.9 82 181-264 7-95 (252)
319 PRK05650 short chain dehydroge 95.8 0.43 9.3E-06 42.1 14.4 79 184-264 2-87 (270)
320 PRK13940 glutamyl-tRNA reducta 95.8 0.14 3.1E-06 48.3 11.8 76 180-267 179-255 (414)
321 PRK12475 thiamine/molybdopteri 95.8 0.14 3E-06 47.1 11.3 34 182-215 24-57 (338)
322 PRK06172 short chain dehydroge 95.8 0.14 3E-06 44.6 11.0 82 181-264 6-94 (253)
323 PRK06482 short chain dehydroge 95.7 0.11 2.4E-06 46.0 10.5 80 183-264 3-86 (276)
324 PRK08213 gluconate 5-dehydroge 95.7 0.14 3E-06 44.8 11.0 82 181-264 11-99 (259)
325 cd01078 NAD_bind_H4MPT_DH NADP 95.7 0.41 8.8E-06 40.2 13.4 99 181-288 27-132 (194)
326 PRK01581 speE spermidine synth 95.7 0.27 5.8E-06 45.4 12.9 100 180-286 149-269 (374)
327 PRK08644 thiamine biosynthesis 95.7 0.16 3.6E-06 43.4 11.0 34 182-215 28-61 (212)
328 PRK06935 2-deoxy-D-gluconate 3 95.7 0.14 3.1E-06 44.7 11.0 82 181-264 14-101 (258)
329 PRK09730 putative NAD(P)-bindi 95.7 0.27 5.8E-06 42.4 12.6 81 183-264 2-89 (247)
330 PRK08690 enoyl-(acyl carrier p 95.7 0.14 3E-06 45.2 10.8 82 181-264 5-94 (261)
331 COG0686 Ald Alanine dehydrogen 95.7 0.065 1.4E-06 47.8 8.4 96 183-287 169-270 (371)
332 PRK12549 shikimate 5-dehydroge 95.7 0.079 1.7E-06 47.5 9.3 95 181-287 126-229 (284)
333 PRK12938 acetyacetyl-CoA reduc 95.7 0.23 5E-06 43.0 12.1 82 182-264 3-91 (246)
334 PRK06138 short chain dehydroge 95.7 0.14 3E-06 44.4 10.7 82 181-264 4-91 (252)
335 PRK06940 short chain dehydroge 95.7 0.23 4.9E-06 44.1 12.2 102 182-287 2-127 (275)
336 COG3288 PntA NAD/NADP transhyd 95.7 0.076 1.7E-06 47.3 8.7 130 180-310 162-309 (356)
337 PLN02823 spermine synthase 95.7 0.15 3.2E-06 46.8 11.1 98 181-285 103-220 (336)
338 PRK07074 short chain dehydroge 95.6 0.14 3.1E-06 44.7 10.7 81 182-264 2-87 (257)
339 PLN03075 nicotianamine synthas 95.6 0.12 2.5E-06 46.4 10.0 99 180-285 122-233 (296)
340 TIGR02355 moeB molybdopterin s 95.6 0.14 3.1E-06 44.7 10.5 94 182-280 24-140 (240)
341 PRK05597 molybdopterin biosynt 95.6 0.13 2.8E-06 47.7 10.7 94 182-280 28-144 (355)
342 PF00899 ThiF: ThiF family; I 95.6 0.12 2.7E-06 40.6 9.3 97 182-285 2-123 (135)
343 PRK08226 short chain dehydroge 95.6 0.16 3.5E-06 44.5 11.0 82 181-264 5-92 (263)
344 PRK06181 short chain dehydroge 95.6 0.18 3.8E-06 44.3 11.2 81 182-264 1-88 (263)
345 PRK08277 D-mannonate oxidoredu 95.6 0.15 3.4E-06 45.1 10.9 81 181-263 9-96 (278)
346 TIGR03206 benzo_BadH 2-hydroxy 95.6 0.17 3.7E-06 43.8 11.0 81 181-263 2-89 (250)
347 PRK06197 short chain dehydroge 95.6 0.15 3.2E-06 46.0 10.8 82 181-264 15-105 (306)
348 PRK06720 hypothetical protein; 95.6 0.28 6E-06 40.3 11.5 82 181-264 15-103 (169)
349 PRK08264 short chain dehydroge 95.6 0.076 1.6E-06 45.8 8.6 77 181-264 5-83 (238)
350 TIGR03215 ac_ald_DH_ac acetald 95.6 0.17 3.6E-06 45.3 10.7 90 184-285 3-95 (285)
351 PRK05557 fabG 3-ketoacyl-(acyl 95.6 0.43 9.3E-06 41.0 13.3 82 181-264 4-93 (248)
352 PRK12743 oxidoreductase; Provi 95.6 0.16 3.4E-06 44.5 10.6 81 182-264 2-90 (256)
353 COG0169 AroE Shikimate 5-dehyd 95.5 0.045 9.7E-07 48.9 7.0 122 180-314 124-255 (283)
354 PRK07067 sorbitol dehydrogenas 95.5 0.18 4E-06 44.0 11.0 82 181-264 5-90 (257)
355 cd05211 NAD_bind_Glu_Leu_Phe_V 95.5 0.16 3.5E-06 43.6 10.3 46 181-226 22-77 (217)
356 PRK05565 fabG 3-ketoacyl-(acyl 95.5 0.36 7.9E-06 41.6 12.8 81 182-264 5-93 (247)
357 PRK00258 aroE shikimate 5-dehy 95.5 0.055 1.2E-06 48.4 7.6 97 180-287 121-223 (278)
358 PRK06114 short chain dehydroge 95.5 0.2 4.3E-06 43.8 11.1 82 181-264 7-96 (254)
359 PRK08328 hypothetical protein; 95.5 0.22 4.8E-06 43.2 11.1 33 182-214 27-59 (231)
360 PRK05690 molybdopterin biosynt 95.5 0.19 4.1E-06 44.0 10.8 95 182-281 32-149 (245)
361 PLN02476 O-methyltransferase 95.5 0.23 4.9E-06 44.2 11.3 107 177-286 114-229 (278)
362 PRK08287 cobalt-precorrin-6Y C 95.5 0.34 7.4E-06 40.3 12.0 101 174-285 24-131 (187)
363 PRK08251 short chain dehydroge 95.5 0.21 4.5E-06 43.3 11.1 80 182-263 2-90 (248)
364 PRK06125 short chain dehydroge 95.5 0.18 3.8E-06 44.2 10.7 79 181-264 6-91 (259)
365 COG2264 PrmA Ribosomal protein 95.5 0.27 5.8E-06 44.1 11.6 132 146-289 129-267 (300)
366 PRK05876 short chain dehydroge 95.5 0.19 4.1E-06 44.7 11.0 82 181-264 5-93 (275)
367 PRK06141 ornithine cyclodeamin 95.5 0.42 9E-06 43.5 13.3 113 175-302 118-236 (314)
368 TIGR00138 gidB 16S rRNA methyl 95.5 0.14 3.1E-06 42.6 9.5 95 181-285 42-142 (181)
369 PRK07856 short chain dehydroge 95.5 0.15 3.4E-06 44.4 10.2 78 181-264 5-85 (252)
370 COG0421 SpeE Spermidine syntha 95.5 0.24 5.2E-06 44.3 11.3 98 183-285 78-190 (282)
371 COG2227 UbiG 2-polyprenyl-3-me 95.5 0.18 3.8E-06 43.5 10.0 98 180-285 58-161 (243)
372 PLN02657 3,8-divinyl protochlo 95.4 0.37 8E-06 45.3 13.3 106 178-287 56-183 (390)
373 PRK14103 trans-aconitate 2-met 95.4 0.24 5.2E-06 43.5 11.4 97 174-284 22-125 (255)
374 PRK11207 tellurite resistance 95.4 0.17 3.6E-06 42.7 10.0 99 175-285 24-134 (197)
375 PRK04266 fibrillarin; Provisio 95.4 0.36 7.8E-06 41.7 12.2 103 175-283 66-174 (226)
376 PF13241 NAD_binding_7: Putati 95.4 0.19 4.2E-06 37.5 9.3 89 181-288 6-94 (103)
377 PRK08993 2-deoxy-D-gluconate 3 95.4 0.22 4.8E-06 43.5 11.1 82 181-264 9-95 (253)
378 PRK07574 formate dehydrogenase 95.4 0.15 3.2E-06 47.8 10.2 89 181-285 191-284 (385)
379 PLN00141 Tic62-NAD(P)-related 95.4 0.26 5.7E-06 43.0 11.4 101 181-287 16-133 (251)
380 PRK08300 acetaldehyde dehydrog 95.4 0.18 3.9E-06 45.4 10.2 94 183-285 5-101 (302)
381 PRK13255 thiopurine S-methyltr 95.4 0.077 1.7E-06 45.6 7.7 106 177-285 33-155 (218)
382 PRK15116 sulfur acceptor prote 95.4 0.29 6.2E-06 43.4 11.4 102 181-287 29-155 (268)
383 PRK06914 short chain dehydroge 95.4 0.21 4.5E-06 44.3 10.8 80 182-264 3-91 (280)
384 PRK06719 precorrin-2 dehydroge 95.4 0.34 7.3E-06 39.3 11.1 89 181-285 12-100 (157)
385 TIGR02354 thiF_fam2 thiamine b 95.3 0.32 6.9E-06 41.2 11.3 34 182-215 21-54 (200)
386 PRK01683 trans-aconitate 2-met 95.3 0.31 6.7E-06 42.8 11.7 100 174-285 24-130 (258)
387 PRK07069 short chain dehydroge 95.3 0.35 7.6E-06 41.9 11.9 101 184-287 1-139 (251)
388 PF02254 TrkA_N: TrkA-N domain 95.3 0.48 1E-05 35.9 11.3 93 185-285 1-96 (116)
389 PRK12936 3-ketoacyl-(acyl-carr 95.3 0.28 6E-06 42.3 11.1 82 181-264 5-90 (245)
390 PRK06523 short chain dehydroge 95.2 0.18 3.9E-06 44.1 10.0 76 181-263 8-86 (260)
391 PRK08416 7-alpha-hydroxysteroi 95.2 0.24 5.2E-06 43.5 10.7 81 181-263 7-96 (260)
392 PRK12744 short chain dehydroge 95.2 0.48 1E-05 41.4 12.7 83 181-264 7-99 (257)
393 cd00757 ThiF_MoeB_HesA_family 95.2 0.23 5.1E-06 42.9 10.4 92 182-279 21-136 (228)
394 PLN02730 enoyl-[acyl-carrier-p 95.2 0.5 1.1E-05 42.8 12.9 30 181-211 8-40 (303)
395 PF02670 DXP_reductoisom: 1-de 95.2 0.46 9.9E-06 37.1 10.9 94 185-282 1-118 (129)
396 PRK00121 trmB tRNA (guanine-N( 95.2 0.29 6.2E-06 41.5 10.7 99 181-285 40-156 (202)
397 COG0373 HemA Glutamyl-tRNA red 95.2 0.11 2.3E-06 48.8 8.6 95 181-288 177-277 (414)
398 PRK12826 3-ketoacyl-(acyl-carr 95.2 0.27 5.8E-06 42.5 10.9 82 181-264 5-93 (251)
399 PRK06113 7-alpha-hydroxysteroi 95.2 0.29 6.2E-06 42.7 11.0 82 181-264 10-98 (255)
400 PF03807 F420_oxidored: NADP o 95.2 0.74 1.6E-05 33.5 11.7 85 184-284 1-93 (96)
401 KOG1014 17 beta-hydroxysteroid 95.2 0.48 1.1E-05 42.4 12.1 114 180-297 47-198 (312)
402 PRK08945 putative oxoacyl-(acy 95.2 0.3 6.5E-06 42.3 11.1 85 178-264 8-102 (247)
403 PRK07424 bifunctional sterol d 95.2 0.18 3.8E-06 47.6 10.1 76 181-264 177-255 (406)
404 PRK12367 short chain dehydroge 95.2 0.21 4.6E-06 43.6 10.0 74 182-264 14-89 (245)
405 COG0031 CysK Cysteine synthase 95.1 0.74 1.6E-05 41.3 13.3 60 172-232 52-114 (300)
406 PRK07097 gluconate 5-dehydroge 95.1 0.31 6.7E-06 42.8 11.1 82 181-264 9-97 (265)
407 KOG0725 Reductases with broad 95.1 0.16 3.5E-06 45.2 9.1 85 180-265 6-100 (270)
408 TIGR01963 PHB_DH 3-hydroxybuty 95.1 0.29 6.2E-06 42.5 10.8 81 182-264 1-88 (255)
409 TIGR02632 RhaD_aldol-ADH rhamn 95.1 0.24 5.1E-06 50.1 11.4 82 181-264 413-503 (676)
410 PRK07666 fabG 3-ketoacyl-(acyl 95.1 0.33 7.1E-06 41.8 10.9 81 182-264 7-94 (239)
411 PLN02244 tocopherol O-methyltr 95.0 0.45 9.8E-06 43.8 12.3 98 180-286 117-224 (340)
412 TIGR00507 aroE shikimate 5-deh 95.0 0.28 6E-06 43.6 10.5 98 179-289 114-218 (270)
413 TIGR00477 tehB tellurite resis 95.0 0.14 2.9E-06 43.2 8.1 96 177-285 26-133 (195)
414 PRK11036 putative S-adenosyl-L 95.0 0.41 9E-06 42.1 11.5 95 180-284 43-148 (255)
415 PRK06997 enoyl-(acyl carrier p 95.0 0.3 6.5E-06 43.0 10.6 106 181-288 5-148 (260)
416 PRK09134 short chain dehydroge 95.0 0.35 7.5E-06 42.3 11.0 83 181-264 8-97 (258)
417 PRK07577 short chain dehydroge 95.0 0.18 4E-06 43.2 9.1 75 181-264 2-78 (234)
418 PRK06718 precorrin-2 dehydroge 95.0 0.62 1.3E-05 39.5 12.0 91 181-286 9-101 (202)
419 PTZ00098 phosphoethanolamine N 95.0 0.46 9.9E-06 42.1 11.7 106 172-286 43-157 (263)
420 PRK07775 short chain dehydroge 94.9 0.35 7.6E-06 42.8 11.0 81 182-264 10-97 (274)
421 cd00755 YgdL_like Family of ac 94.9 0.33 7.2E-06 42.1 10.4 99 182-285 11-134 (231)
422 PRK08762 molybdopterin biosynt 94.9 0.31 6.7E-06 45.6 11.0 35 181-215 134-168 (376)
423 PLN02256 arogenate dehydrogena 94.9 0.63 1.4E-05 42.2 12.6 95 175-286 29-128 (304)
424 PLN03139 formate dehydrogenase 94.9 0.22 4.7E-06 46.6 9.8 89 181-285 198-291 (386)
425 PRK12749 quinate/shikimate deh 94.9 0.24 5.2E-06 44.5 9.8 36 181-216 123-158 (288)
426 PRK08303 short chain dehydroge 94.9 0.37 8.1E-06 43.6 11.2 81 181-263 7-105 (305)
427 PRK14175 bifunctional 5,10-met 94.9 0.17 3.8E-06 45.1 8.7 85 172-288 147-233 (286)
428 TIGR02992 ectoine_eutC ectoine 94.9 0.53 1.1E-05 43.1 12.1 105 178-296 125-236 (326)
429 PRK13243 glyoxylate reductase; 94.8 0.28 6E-06 45.1 10.3 88 181-286 149-241 (333)
430 cd01080 NAD_bind_m-THF_DH_Cycl 94.8 0.22 4.7E-06 41.0 8.5 78 179-288 41-119 (168)
431 TIGR01289 LPOR light-dependent 94.8 0.37 7.9E-06 43.8 11.0 81 182-264 3-91 (314)
432 TIGR00872 gnd_rel 6-phosphoglu 94.8 0.88 1.9E-05 41.0 13.3 43 184-227 2-44 (298)
433 cd01492 Aos1_SUMO Ubiquitin ac 94.8 0.38 8.2E-06 40.6 10.2 93 182-280 21-136 (197)
434 KOG2017 Molybdopterin synthase 94.8 0.11 2.3E-06 47.0 6.9 102 182-289 66-204 (427)
435 PLN02781 Probable caffeoyl-CoA 94.8 0.42 9.1E-06 41.5 10.7 106 177-285 64-178 (234)
436 PRK08291 ectoine utilization p 94.7 0.67 1.5E-05 42.5 12.5 104 179-296 129-239 (330)
437 TIGR00563 rsmB ribosomal RNA s 94.7 0.63 1.4E-05 44.3 12.7 105 174-285 231-368 (426)
438 PRK07791 short chain dehydroge 94.7 0.37 7.9E-06 43.1 10.6 83 180-264 4-102 (286)
439 PRK08936 glucose-1-dehydrogena 94.7 0.38 8.1E-06 42.2 10.5 82 181-264 6-95 (261)
440 PRK12548 shikimate 5-dehydroge 94.7 0.21 4.6E-06 44.9 9.0 36 181-216 125-160 (289)
441 PRK03612 spermidine synthase; 94.7 0.4 8.7E-06 46.9 11.5 99 180-285 296-415 (521)
442 PF02558 ApbA: Ketopantoate re 94.7 0.021 4.6E-07 45.8 2.3 94 185-285 1-101 (151)
443 PLN02233 ubiquinone biosynthes 94.7 0.45 9.8E-06 42.0 10.9 105 175-288 67-185 (261)
444 TIGR02622 CDP_4_6_dhtase CDP-g 94.7 0.37 7.9E-06 44.4 10.8 78 181-264 3-85 (349)
445 PRK12825 fabG 3-ketoacyl-(acyl 94.7 0.32 6.9E-06 41.8 9.8 82 181-263 5-93 (249)
446 PF01596 Methyltransf_3: O-met 94.6 0.28 6E-06 41.7 9.1 107 178-287 42-157 (205)
447 TIGR02752 MenG_heptapren 2-hep 94.6 0.4 8.6E-06 41.3 10.3 103 175-286 39-152 (231)
448 COG2226 UbiE Methylase involve 94.6 0.95 2.1E-05 39.4 12.4 108 175-291 45-162 (238)
449 PRK15469 ghrA bifunctional gly 94.6 0.3 6.5E-06 44.4 9.7 87 181-285 135-226 (312)
450 PRK05855 short chain dehydroge 94.6 0.34 7.4E-06 47.6 11.0 82 181-264 314-402 (582)
451 PRK07417 arogenate dehydrogena 94.6 0.34 7.5E-06 43.2 10.0 88 184-286 2-92 (279)
452 TIGR02415 23BDH acetoin reduct 94.6 0.35 7.6E-06 42.0 9.9 80 183-264 1-87 (254)
453 PRK12769 putative oxidoreducta 94.5 0.18 3.8E-06 50.8 8.9 78 180-265 325-423 (654)
454 PRK05447 1-deoxy-D-xylulose 5- 94.5 0.37 8.1E-06 44.8 10.2 97 183-283 2-120 (385)
455 PRK14192 bifunctional 5,10-met 94.5 0.22 4.7E-06 44.6 8.4 84 173-288 149-234 (283)
456 KOG4169 15-hydroxyprostaglandi 94.5 0.37 8.1E-06 41.3 9.3 116 182-299 5-150 (261)
457 PRK06947 glucose-1-dehydrogena 94.5 0.41 8.9E-06 41.4 10.2 81 183-264 3-90 (248)
458 PF13823 ADH_N_assoc: Alcohol 94.5 0.046 1E-06 28.8 2.5 22 18-39 1-22 (23)
459 PRK00536 speE spermidine synth 94.5 0.23 5E-06 43.8 8.4 101 180-286 71-172 (262)
460 PRK06171 sorbitol-6-phosphate 94.5 0.26 5.7E-06 43.2 9.0 78 181-264 8-87 (266)
461 PRK09135 pteridine reductase; 94.5 0.51 1.1E-05 40.7 10.6 81 181-263 5-94 (249)
462 PRK00216 ubiE ubiquinone/menaq 94.5 1 2.2E-05 38.6 12.6 105 175-287 45-160 (239)
463 PLN02928 oxidoreductase family 94.4 0.35 7.7E-06 44.6 10.0 95 181-285 158-262 (347)
464 PF10727 Rossmann-like: Rossma 94.4 0.11 2.4E-06 40.5 5.6 85 183-284 11-102 (127)
465 PRK12490 6-phosphogluconate de 94.4 0.66 1.4E-05 41.9 11.5 93 184-289 2-98 (299)
466 PRK08655 prephenate dehydrogen 94.4 0.46 1E-05 45.3 10.9 87 184-286 2-93 (437)
467 PRK07878 molybdopterin biosynt 94.4 0.38 8.2E-06 45.3 10.1 34 182-215 42-75 (392)
468 PF01118 Semialdhyde_dh: Semia 94.3 0.22 4.8E-06 38.4 7.2 92 184-287 1-99 (121)
469 TIGR01829 AcAcCoA_reduct aceto 94.3 0.33 7.1E-06 41.7 9.2 80 183-264 1-88 (242)
470 PRK10669 putative cation:proto 94.3 0.63 1.4E-05 45.9 12.1 95 183-285 418-515 (558)
471 PRK05600 thiamine biosynthesis 94.3 0.54 1.2E-05 43.8 10.9 34 182-215 41-74 (370)
472 PF08704 GCD14: tRNA methyltra 94.3 0.23 4.9E-06 43.5 7.9 108 173-285 32-146 (247)
473 PF13561 adh_short_C2: Enoyl-( 94.3 0.35 7.6E-06 41.9 9.3 96 191-288 6-136 (241)
474 PF01113 DapB_N: Dihydrodipico 94.3 0.89 1.9E-05 35.2 10.6 93 184-289 2-101 (124)
475 KOG1610 Corticosteroid 11-beta 94.3 1.1 2.4E-05 40.2 12.1 113 179-293 26-172 (322)
476 PRK09599 6-phosphogluconate de 94.2 0.88 1.9E-05 41.1 12.0 44 184-228 2-45 (301)
477 PRK05562 precorrin-2 dehydroge 94.2 1.4 3.1E-05 37.8 12.4 93 181-286 24-117 (223)
478 PRK05599 hypothetical protein; 94.2 0.65 1.4E-05 40.4 10.7 78 184-264 2-87 (246)
479 PRK06849 hypothetical protein; 94.2 0.79 1.7E-05 43.0 12.0 98 181-282 3-104 (389)
480 PRK07102 short chain dehydroge 94.2 0.37 8E-06 41.6 9.1 37 183-220 2-39 (243)
481 PRK07792 fabG 3-ketoacyl-(acyl 94.2 0.49 1.1E-05 42.8 10.2 81 181-264 11-99 (306)
482 PRK08278 short chain dehydroge 94.1 0.64 1.4E-05 41.1 10.7 82 181-264 5-100 (273)
483 PRK12935 acetoacetyl-CoA reduc 94.1 0.6 1.3E-05 40.3 10.4 82 181-264 5-94 (247)
484 PRK07889 enoyl-(acyl carrier p 94.1 0.69 1.5E-05 40.5 10.8 104 181-286 6-146 (256)
485 PRK03562 glutathione-regulated 94.1 0.49 1.1E-05 47.3 10.9 95 182-284 400-497 (621)
486 TIGR01532 E4PD_g-proteo D-eryt 94.1 0.51 1.1E-05 43.1 10.1 102 184-287 1-122 (325)
487 PRK05134 bifunctional 3-demeth 94.1 0.34 7.5E-06 41.8 8.7 98 177-285 44-151 (233)
488 TIGR01505 tartro_sem_red 2-hyd 94.1 0.64 1.4E-05 41.7 10.7 86 184-285 1-93 (291)
489 PLN02490 MPBQ/MSBQ methyltrans 94.0 0.39 8.4E-06 44.2 9.2 105 174-286 105-216 (340)
490 PRK07411 hypothetical protein; 94.0 0.43 9.4E-06 44.8 9.8 34 182-215 38-71 (390)
491 PLN00203 glutamyl-tRNA reducta 94.0 0.4 8.7E-06 46.7 9.8 75 182-266 266-341 (519)
492 PRK06123 short chain dehydroge 94.0 0.65 1.4E-05 40.1 10.4 81 182-264 2-90 (248)
493 PRK10258 biotin biosynthesis p 94.0 0.86 1.9E-05 39.8 11.2 99 175-286 36-141 (251)
494 PRK14901 16S rRNA methyltransf 94.0 0.76 1.7E-05 43.8 11.5 106 175-285 246-384 (434)
495 PRK11064 wecC UDP-N-acetyl-D-m 94.0 1.2 2.6E-05 42.3 12.7 99 183-288 4-122 (415)
496 TIGR00446 nop2p NOL1/NOP2/sun 93.9 2.6 5.6E-05 37.3 14.1 101 176-285 66-199 (264)
497 PRK06035 3-hydroxyacyl-CoA deh 93.9 0.44 9.6E-06 42.8 9.4 39 183-222 4-42 (291)
498 PRK06522 2-dehydropantoate 2-r 93.9 0.41 8.8E-06 43.1 9.2 95 184-285 2-100 (304)
499 PLN02589 caffeoyl-CoA O-methyl 93.9 0.99 2.1E-05 39.5 11.2 106 177-285 75-190 (247)
500 PRK11761 cysM cysteine synthas 93.9 2.6 5.7E-05 38.0 14.3 59 174-232 55-115 (296)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.9e-58 Score=411.01 Aligned_cols=290 Identities=31% Similarity=0.445 Sum_probs=260.8
Q ss_pred hhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768 15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (321)
Q Consensus 15 ~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~ 93 (321)
+++|||+++.+.+ ++++.|++.|+|+++||+|||+|+|+|++|++.++|.++. ..+|++||||++|+|+++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~ 77 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVT 77 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCc
Confidence 4689999998764 4999999999999999999999999999999999987754 35899999999999999999999
Q ss_pred CCCCCCEEEE-cCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHH
Q 020768 94 TLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL 171 (321)
Q Consensus 94 ~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~ 171 (321)
+|++||||.+ ....+|++|.||+.++.++|++....+. +.+|+|+||+++++++++++|+++++.+||.+. ...|+|
T Consensus 78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y 156 (339)
T COG1064 78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY 156 (339)
T ss_pred cCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence 9999999999 7788999999999999999999666554 699999999999999999999999999999664 667889
Q ss_pred HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
++++..+++||++|+|.|+|++|++++|+|+++|+ .|++++++++|+++++++|++++++.. +.++.+.+.+
T Consensus 157 ~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~----- 228 (339)
T COG1064 157 RALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE----- 228 (339)
T ss_pred eehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh-----
Confidence 99999999999999999999999999999999997 799999999999999999999999854 3444444433
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CC-ccccchhhhccceEEEEeehhHHHhhccc
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LE-MTVPLTPAAARYLIYSFLFHFFLIVLGYS 319 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~k~~~i~g~~~~~~~~~~~~ 319 (321)
.+|++||+++ +.+++.+++.|+++|+++++|... .+ ..++...+++++++|.|++.++.+++-+|
T Consensus 229 --~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~ 295 (339)
T COG1064 229 --IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEA 295 (339)
T ss_pred --hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHH
Confidence 2999999999 899999999999999999999884 43 55888889999999999999988877654
No 2
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-58 Score=396.67 Aligned_cols=304 Identities=51% Similarity=0.841 Sum_probs=278.2
Q ss_pred hhhceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768 15 EEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (321)
Q Consensus 15 ~~~~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~ 93 (321)
..+|+|+++.+++.+++++.|.|++ +|+||+|++.++|||.+|++.+.+...+.+..+.|+++|||.+|+|+++|+.|+
T Consensus 2 ~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 2 AADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred CcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4679999999999999999999988 999999999999999999999998777776677899999999999999999999
Q ss_pred CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHH
Q 020768 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA 173 (321)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~ 173 (321)
++++||||++.|..+|+.|.+|+.|++|+|+++.+.+..+.+|++++|++.+++.|+++|++++++++|+++++++++||
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~HA 161 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVHA 161 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC-
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG- 252 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~- 252 (321)
.+++++++|++|||+|||++|+++...||++|++.|++++..++|++++++||++.+.+..... ...+..+.+.+..+
T Consensus 162 cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~v~~~~g~ 240 (354)
T KOG0024|consen 162 CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAELVEKALGK 240 (354)
T ss_pred hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999887755433 22222222323223
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhhccc
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYS 319 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~ 319 (321)
..+|++|||+|-..+++.++..++.+|+++++|+-....++++.....|+++++|+|+|..+.+...
T Consensus 241 ~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~a 307 (354)
T KOG0024|consen 241 KQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTA 307 (354)
T ss_pred cCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHH
Confidence 5599999999999999999999999999999998888899999999999999999999988766543
No 3
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-48 Score=357.06 Aligned_cols=287 Identities=31% Similarity=0.540 Sum_probs=247.7
Q ss_pred hhhceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 15 ~~~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
-..+|++++.+++.+++++.|.| ++++||||||.++++|++|++.+.+...+.....+|.++|||++|+|+++ ++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 2 QVKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred cccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 35689999999999999999997 68999999999999999999987633222222457999999999999999 7889
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG 170 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a 170 (321)
|++||+|.+.+..+|++|.+|..+.+++|.+...++.. ..+|+|+||++++++.++++|++++++++++..+++++
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a 158 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVA 158 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHH
Confidence 99999999999999999999999999999987665431 35799999999999999999999999888877889999
Q ss_pred HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
|+++++....+|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++++++ .++.+ +...
T Consensus 159 ~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~~ 232 (343)
T PRK09880 159 IHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKAE 232 (343)
T ss_pred HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhcc
Confidence 99998877789999999999999999999999999977999999999999999999999988654 23322 2211
Q ss_pred hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
.+++|++|||+|++..++.++++++++|+++.+|......++++..++.|++++.|+..+
T Consensus 233 -~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 233 -KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred -CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec
Confidence 246999999999877899999999999999999976655678888889999999998753
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.5e-48 Score=338.39 Aligned_cols=286 Identities=29% Similarity=0.458 Sum_probs=247.0
Q ss_pred hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
++|+++..++ ++|+++|++++.|+++|||||+.|+|+||+|...++|.++ ..+|.++|||++|+|+++|++|+++
T Consensus 2 k~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p----~~~P~vLGHEgAGiVe~VG~gVt~v 77 (366)
T COG1062 2 KTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP----EGFPAVLGHEGAGIVEAVGEGVTSV 77 (366)
T ss_pred CceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCceecccccccEEEEecCCcccc
Confidence 5788888754 7899999999999999999999999999999999998765 4589999999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccc-------ccc-----------CCC--CCcceeEEEecCCcEEECCCC
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-------FAT-----------PPV--HGSLANQVVHPADLCFKLPDN 155 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----------~~~--~G~~~~~~~v~~~~~~~ip~~ 155 (321)
++||+|+..+..+|++|+.|..+++++|..... ..+ ... .++|+||.++++..+++++++
T Consensus 78 kpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~ 157 (366)
T COG1062 78 KPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPD 157 (366)
T ss_pred CCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCC
Confidence 999999999999999999999999999963210 000 112 259999999999999999999
Q ss_pred CChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768 156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233 (321)
Q Consensus 156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~ 233 (321)
.+++.++++. ...|.+.+. +.+++++|++|.|.|.|++|++++|-|+..|+.++|+++.+++|++++++||+++++|.
T Consensus 158 ~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~ 237 (366)
T COG1062 158 APLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNP 237 (366)
T ss_pred CCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecc
Confidence 9999999886 455667654 77999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchh--hhccceEEEEeehh
Q 020768 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTP--AAARYLIYSFLFHF 311 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~k~~~i~g~~~~ 311 (321)
.+.. +..+.+.++ .++|+|++|||+|+.+.+++++.++.++|+.+++|..+...++++.+ |. .+.+++|+...
T Consensus 238 ~~~~-~vv~~i~~~---T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv-~gr~~~Gs~~G 312 (366)
T COG1062 238 KEVD-DVVEAIVEL---TDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLV-TGRVWKGSAFG 312 (366)
T ss_pred hhhh-hHHHHHHHh---cCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHee-ccceEEEEeec
Confidence 4322 455555554 45699999999999999999999999999999999887766666555 44 45889988764
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-48 Score=334.41 Aligned_cols=298 Identities=27% Similarity=0.358 Sum_probs=250.4
Q ss_pred ccchhhceeEEEccC-C--CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEe
Q 020768 12 EDGEEVNMAAWLLGV-N--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88 (321)
Q Consensus 12 ~~~~~~~~a~~~~~~-~--~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~v 88 (321)
...|++.++..+.++ + .+++.+++.|+|+++||+|||+++|+|++|++.+.|.+.. ..+|.++|||++|+|+++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEEE
Confidence 456778888888754 3 6777999999999999999999999999999999986532 688999999999999999
Q ss_pred CCCCCCCCCCCEEEEcC-CccCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhh
Q 020768 89 GSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEG 161 (321)
Q Consensus 89 G~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~a 161 (321)
|++|++|++||+|.+-. ..+|.+|.+|..+..++|++.-+.. +..++|+|++|+++++..+++||++++.++|
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a 160 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA 160 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence 99999999999998854 5599999999999999999644322 2345677999999999999999999999999
Q ss_pred ccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCccc
Q 020768 162 AMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQD 239 (321)
Q Consensus 162 a~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~ 239 (321)
|.+. ..-|.|.++.+.++.||+++.|.|+|++|++++|+||++|. +|++++++. +|++..+.||++..++..+ +++
T Consensus 161 APlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~-d~d 238 (360)
T KOG0023|consen 161 APLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE-DPD 238 (360)
T ss_pred cchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC-CHH
Confidence 9655 44567889999999999999999997799999999999999 677887776 7777788899999887543 345
Q ss_pred HHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhhccc
Q 020768 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVLGYS 319 (321)
Q Consensus 240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~ 319 (321)
+.+.+. ++...++|-|.+. ....++.+++.|+.+|+++++|.+..+..+++-+++.++++|.|+...+..+..+|
T Consensus 239 ~~~~~~---~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~ 313 (360)
T KOG0023|consen 239 IMKAIM---KTTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEA 313 (360)
T ss_pred HHHHHH---HhhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHH
Confidence 444443 3445556666554 45788999999999999999999988899999999999999999988777665544
No 6
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9e-47 Score=324.54 Aligned_cols=295 Identities=26% Similarity=0.378 Sum_probs=256.5
Q ss_pred chhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768 14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (321)
Q Consensus 14 ~~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v 92 (321)
...++||++.-++ .+|.++|+..++|+.+||+||++++++|++|...++|..+. ..+|.++|||++|+|+.+|++|
T Consensus 4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~---~~fP~IlGHEaaGIVESvGegV 80 (375)
T KOG0022|consen 4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPE---GLFPVILGHEAAGIVESVGEGV 80 (375)
T ss_pred CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCcc---ccCceEecccceeEEEEecCCc
Confidence 3567999998765 68999999999999999999999999999999999986532 5789999999999999999999
Q ss_pred CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccc--------c-------------CCCCCcceeEEEecCCcEEE
Q 020768 93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--------T-------------PPVHGSLANQVVHPADLCFK 151 (321)
Q Consensus 93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------------~~~~G~~~~~~~v~~~~~~~ 151 (321)
+.+++||+|+..+...|++|.+|++++.|+|....... + .-...+|+||.++++..+.+
T Consensus 81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence 99999999999999999999999999999996432211 1 11224999999999999999
Q ss_pred CCCCCChhhhccch-hhHHHHHH-HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe
Q 020768 152 LPDNVSLEEGAMCE-PLSVGLHA-CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN 229 (321)
Q Consensus 152 ip~~~~~~~aa~~~-~~~~a~~~-l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~ 229 (321)
|++..+++.++++. .++|+|.| ++.+++++|+++.|+|.|++|+++++-||+.|++++|++|-+++|.+++++||+++
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe 240 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE 240 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence 99999999999886 67788866 47899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchh-hhccceEEEE
Q 020768 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTP-AAARYLIYSF 307 (321)
Q Consensus 230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~k~~~i~g 307 (321)
++|..+......+.+.++ .++|+|+.|||.|+.+++++++.+...+ |+-+++|......++++.+ .+.++.++.|
T Consensus 241 ~iNp~d~~~~i~evi~Em---TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~G 317 (375)
T KOG0022|consen 241 FINPKDLKKPIQEVIIEM---TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKG 317 (375)
T ss_pred ecChhhccccHHHHHHHH---hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEE
Confidence 998764333456666665 3689999999999999999999999999 9999999887766776666 2457888888
Q ss_pred eehhHHH
Q 020768 308 LFHFFLI 314 (321)
Q Consensus 308 ~~~~~~~ 314 (321)
+....|.
T Consensus 318 s~FGG~K 324 (375)
T KOG0022|consen 318 SAFGGFK 324 (375)
T ss_pred Eeccccc
Confidence 8876543
No 7
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=5.1e-46 Score=341.96 Aligned_cols=288 Identities=33% Similarity=0.540 Sum_probs=247.0
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
|||+++.+++.++++++|.|.|+++||+|||.++++|++|++.+.+.+.. ...+|.++|||++|+|+++|++|+.|++
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (339)
T cd08239 1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV 78 (339)
T ss_pred CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence 78999998889999999999999999999999999999999988765322 1235889999999999999999999999
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHH
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR 176 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~ 176 (321)
||+|++.+..+|++|++|..++.++|.+.....+...+|+|+||+.+++++++++|+++++.+|+.+. ++.++|++++.
T Consensus 79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~ 158 (339)
T cd08239 79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRR 158 (339)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence 99999999999999999999999999876542223467999999999999999999999999988664 77899999988
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
+.+++|++|||+|+|++|++++|+|+++|++.|++++++++|.++++++|++.++++++ .+ .+.+.++. .+.++|
T Consensus 159 ~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~~d 233 (339)
T cd08239 159 VGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAGAD 233 (339)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCCCC
Confidence 88999999999999999999999999999965888999999999999999999887643 23 34444432 345899
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccc-hhhhccceEEEEeehhHH
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPL-TPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~k~~~i~g~~~~~~ 313 (321)
++|||+|+...+..++++|+++|+++.+|.... .+++. ..++.|++++.|++.+..
T Consensus 234 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~ 290 (339)
T cd08239 234 VAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFSV 290 (339)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCCH
Confidence 999999998777899999999999999997543 23443 357889999999887543
No 8
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.3e-46 Score=346.00 Aligned_cols=285 Identities=35% Similarity=0.575 Sum_probs=236.7
Q ss_pred ceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCc-ccccceeEEEEEeCCCCCCC
Q 020768 18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM-VIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 18 ~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~-~~G~e~vG~V~~vG~~v~~~ 95 (321)
||++++..+. ..++++.+.|.++++||+|||.++|||.+|++.+++..+. ...|. ++|||++|+|+++| .++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~~~~ 76 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VVRGF 76 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cccCC
Confidence 6777777654 4448888888889999999999999999999999985432 23344 99999999999999 77889
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCcEEEC-CCCCChhhhccchhhHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKL-PDNVSLEEGAMCEPLSVG 170 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~v~~~~~~~i-p~~~~~~~aa~~~~~~~a 170 (321)
++||||++.+..+|++|++|+.+.+++|.+..+++.. ..+|+|+||+.+|.++.+.+ |++++.++|++.++++++
T Consensus 77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~ 156 (350)
T COG1063 77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA 156 (350)
T ss_pred CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhh
Confidence 9999999999999999999999999999976655432 26899999999997666665 677788888899999999
Q ss_pred HHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHH
Q 020768 171 LHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQ 248 (321)
Q Consensus 171 ~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~ 248 (321)
+++. .....+++++|+|+|+|++|++++++++.+|+++|++++.+++|++++++ +|++.+++.... +....+.++
T Consensus 157 ~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~--~~~~~~~~~- 233 (350)
T COG1063 157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED--DAGAEILEL- 233 (350)
T ss_pred hhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc--cHHHHHHHH-
Confidence 8774 44555666699999999999999999999999999999999999999999 555555543221 333333333
Q ss_pred HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc-cccchhhhccceEEEEeeh
Q 020768 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM-TVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~k~~~i~g~~~ 310 (321)
+.+.++|++|||+|.+..+..++++++++|+++++|...... .++...++.|++++.|++.
T Consensus 234 -t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~ 295 (350)
T COG1063 234 -TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLR 295 (350)
T ss_pred -hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccC
Confidence 345689999999999989999999999999999999887765 6888889999999999955
No 9
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.8e-46 Score=347.29 Aligned_cols=293 Identities=26% Similarity=0.389 Sum_probs=246.3
Q ss_pred chhhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768 14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (321)
Q Consensus 14 ~~~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v 92 (321)
.+.+||++++.+++ .+.++|+|.|.|+++||+|||.++++|++|++.+.|.... ...+|.++|||++|+|+++|+++
T Consensus 7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG~~v 84 (381)
T PLN02740 7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVGEGV 84 (381)
T ss_pred cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeCCCC
Confidence 45679999998775 5889999999999999999999999999999998875421 13568999999999999999999
Q ss_pred CCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc-----------------------CCCCCcceeEEEecCCcE
Q 020768 93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-----------------------PPVHGSLANQVVHPADLC 149 (321)
Q Consensus 93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~G~~~~~~~v~~~~~ 149 (321)
++|++||+|++.+..+|+.|.+|+.+.+++|.+....+. ...+|+|+||++++.+.+
T Consensus 85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 999999999999999999999999999999988643210 012699999999999999
Q ss_pred EECCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768 150 FKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA 227 (321)
Q Consensus 150 ~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~ 227 (321)
+++|+++++++++.+. ++.++|+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|+
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga 244 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence 9999999999888665 677888876 56889999999999999999999999999999668999999999999999999
Q ss_pred CeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchhh-hccceEE
Q 020768 228 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTPA-AARYLIY 305 (321)
Q Consensus 228 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~k~~~i 305 (321)
+.+++..+...++.+.++++. ++++|++||++|++..+..++.+++++ |+++.+|.......+++.++ +.++++|
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i 321 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI 321 (381)
T ss_pred cEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeE
Confidence 998876543334666665543 238999999999988999999999996 99999997654333444332 3478999
Q ss_pred EEeehh
Q 020768 306 SFLFHF 311 (321)
Q Consensus 306 ~g~~~~ 311 (321)
.|++..
T Consensus 322 ~g~~~~ 327 (381)
T PLN02740 322 TGSVFG 327 (381)
T ss_pred EEEecC
Confidence 998653
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.2e-45 Score=341.78 Aligned_cols=285 Identities=32% Similarity=0.470 Sum_probs=244.9
Q ss_pred ceeEEEcc---------CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEe
Q 020768 18 NMAAWLLG---------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88 (321)
Q Consensus 18 ~~a~~~~~---------~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~v 88 (321)
|||+++.+ ++.++++++|.|.|+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~v 76 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVEV 76 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEEe
Confidence 78888874 35799999999999999999999999999999999887542 356899999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCc
Q 020768 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADL 148 (321)
Q Consensus 89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~G~~~~~~~v~~~~ 148 (321)
|+++++|++||+|++.+..+|++|.+|+.+.+++|.+...... ....|+|+||+.+++++
T Consensus 77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence 9999999999999998888999999999999999987532110 00137999999999999
Q ss_pred EEECCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC
Q 020768 149 CFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG 226 (321)
Q Consensus 149 ~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g 226 (321)
++++|+++++++|+.++ +..+||+++ +.+.+++|++|||+|+|++|++++|+|+++|++.|++++.+++|+++++++|
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~G 236 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELG 236 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcC
Confidence 99999999999988765 577888886 5688999999999999999999999999999977899999999999999999
Q ss_pred CCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceE
Q 020768 227 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLI 304 (321)
Q Consensus 227 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~ 304 (321)
++.++++.+ .++.+.++++. ++++|++|||+|.+..+..++++++++|+++.+|...+ ..+++...++.|+++
T Consensus 237 a~~~i~~~~--~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 311 (371)
T cd08281 237 ATATVNAGD--PNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERT 311 (371)
T ss_pred CceEeCCCc--hhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCE
Confidence 998887543 45666665542 34899999999988899999999999999999997643 346777778999999
Q ss_pred EEEeehh
Q 020768 305 YSFLFHF 311 (321)
Q Consensus 305 i~g~~~~ 311 (321)
+.|++..
T Consensus 312 i~g~~~~ 318 (371)
T cd08281 312 LKGSYMG 318 (371)
T ss_pred EEEEecC
Confidence 9998864
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.2e-44 Score=335.29 Aligned_cols=286 Identities=29% Similarity=0.453 Sum_probs=243.8
Q ss_pred hceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 17 VNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 17 ~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
|||++++.+++ .++++|+|.|.|+++||+|||.++++|++|++.+.|... ..+|+++|||++|+|+++|+++++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~ 76 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV 76 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence 69999998764 599999999999999999999999999999998887532 3468999999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCcccc--------cc----CCCCCcceeEEEecCCcEEECCCCCChhhhcc
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------AT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM 163 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~ 163 (321)
++||+|++.+...|++|.+|..++.++|.+.... +. ...+|+|+||+.+++..++++|+++++++|++
T Consensus 77 ~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~ 156 (358)
T TIGR03451 77 APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL 156 (358)
T ss_pred CCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence 9999999999899999999999999999753110 00 01369999999999999999999999998886
Q ss_pred ch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768 164 CE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241 (321)
Q Consensus 164 ~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 241 (321)
+. .+.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++.++++.+ .++.
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~ 234 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--TDPV 234 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--cCHH
Confidence 65 566778776 4578999999999999999999999999999977999999999999999999999887643 4555
Q ss_pred HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC--ccccchhhhccceEEEEeeh
Q 020768 242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE--MTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~ 310 (321)
+.+.++. .+.++|++|||+|++..+..++++++++|+++.+|..... .+++...++.|++++.|++.
T Consensus 235 ~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~ 303 (358)
T TIGR03451 235 EAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY 303 (358)
T ss_pred HHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence 5555542 3567999999999878899999999999999999976443 45666678889999999863
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.4e-44 Score=336.79 Aligned_cols=287 Identities=23% Similarity=0.369 Sum_probs=241.7
Q ss_pred hhceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 16 ~~~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
..||++++.++. .++++|+|.|.|+++||+|||.++++|++|++.+.+. ..+|.++|||++|+|+++|+++++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~vG~~v~~ 84 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVESIGEGVTE 84 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEEcCCCCcc
Confidence 459999988764 6999999999999999999999999999999987753 245889999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccc----------------c----CCCCCcceeEEEecCCcEEECCC
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA----------------T----PPVHGSLANQVVHPADLCFKLPD 154 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~----~~~~G~~~~~~~v~~~~~~~ip~ 154 (321)
|++||+|++.+..+|++|.+|+.+.+++|.+..... . ...+|+|+||+.+++..++++|+
T Consensus 85 ~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~ 164 (378)
T PLN02827 85 FEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDP 164 (378)
T ss_pred cCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCC
Confidence 999999999988899999999999999998753210 0 01248999999999999999999
Q ss_pred CCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768 155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232 (321)
Q Consensus 155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~ 232 (321)
++++++++.+. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|++.+++
T Consensus 165 ~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~ 244 (378)
T PLN02827 165 LAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFIN 244 (378)
T ss_pred CCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEc
Confidence 99998888665 556777765 5578999999999999999999999999999977888888999999999999998887
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccc-hhhhccceEEEEeeh
Q 020768 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPL-TPAAARYLIYSFLFH 310 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~k~~~i~g~~~ 310 (321)
+.+...++.+.++++. ++++|++||++|....+..+++.++++ |+++.+|.......++. ..++.|++++.|++.
T Consensus 245 ~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T PLN02827 245 PNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF 321 (378)
T ss_pred ccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence 6543235555555542 348999999999877889999999998 99999997654444444 357889999999875
Q ss_pred h
Q 020768 311 F 311 (321)
Q Consensus 311 ~ 311 (321)
.
T Consensus 322 ~ 322 (378)
T PLN02827 322 G 322 (378)
T ss_pred C
Confidence 3
No 13
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=9e-45 Score=339.12 Aligned_cols=285 Identities=26% Similarity=0.487 Sum_probs=231.9
Q ss_pred hceeEEEccCCCeEEEEecCCCCC-------CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768 17 VNMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89 (321)
Q Consensus 17 ~~~a~~~~~~~~l~~~e~~~p~~~-------~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG 89 (321)
-||++++.+++.++++|+|.|+|+ ++||||||.+++||++|++.+.|... ..+|.++|||++|+|+++|
T Consensus 2 ~mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~----~~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 2 GNRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT----APTGLVLGHEITGEVIEKG 77 (393)
T ss_pred CceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC----CCCCccccceeEEEEEEEc
Confidence 389999988889999999999874 68999999999999999999887432 3568999999999999999
Q ss_pred CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCcc------cccc---CCCCCcceeEEEecCC--cEEECCCCCCh
Q 020768 90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFAT---PPVHGSLANQVVHPAD--LCFKLPDNVSL 158 (321)
Q Consensus 90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~G~~~~~~~v~~~--~~~~ip~~~~~ 158 (321)
++|++|++||||.+.+..+|++|.+|+.+++++|.+.. +++. ...+|+|+||+++++. +++++|++++.
T Consensus 78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~ 157 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA 157 (393)
T ss_pred CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccc
Confidence 99999999999999999999999999999999999753 1221 1257999999999964 79999998653
Q ss_pred ----hh-hccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768 159 ----EE-GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233 (321)
Q Consensus 159 ----~~-aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~ 233 (321)
.. +++..++.++|++++..++++|++|||.|+|++|++++|+|+++|++.+++++.+++|.++++++|++. ++.
T Consensus 158 ~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~ 236 (393)
T TIGR02819 158 LEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDL 236 (393)
T ss_pred cccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-Eec
Confidence 22 334558889999998888999999999888999999999999999977777778889999999999974 443
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEcCCCH--------------HHHHHHHHHcccCCEEEEEcCCC-CC-c------
Q 020768 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN--------------KTMSTALSATRAGGKVCLVGMGH-LE-M------ 291 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~-~------ 291 (321)
.. ..++.+.+.++. .+.++|++||++|.+ ..++.++++++++|+++++|... .. .
T Consensus 237 ~~-~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~ 313 (393)
T TIGR02819 237 SK-DATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAA 313 (393)
T ss_pred CC-cccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccc
Confidence 22 234555555542 356799999999985 47999999999999999999753 21 1
Q ss_pred -----cccchhhhccceEEEEee
Q 020768 292 -----TVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 292 -----~~~~~~~~~k~~~i~g~~ 309 (321)
++....++.|++++.|..
T Consensus 314 ~~~~~~i~~~~~~~~~~~i~g~~ 336 (393)
T TIGR02819 314 KTGSLSIRFGLGWAKSHSFHTGQ 336 (393)
T ss_pred cccccccchHHhhccCceEEecc
Confidence 233444566777777653
No 14
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=7.4e-45 Score=330.40 Aligned_cols=263 Identities=33% Similarity=0.419 Sum_probs=227.9
Q ss_pred ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++.. +..++++|+|.|.|+++||||||+|+++|+.|++.++|.. ....++|+++|.|++|+|+++|++|+.
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~--~~~~~~P~i~G~d~aG~V~avG~~V~~ 78 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA--PPVRPLPFIPGSEAAGVVVAVGSGVTG 78 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCC--CCCCCCCCcccceeEEEEEEeCCCCCC
Confidence 67888873 3459999999999999999999999999999999999862 222568999999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
|++||+|+.... . ..+|+|+||+.+|+++++++|+++++++||+++ .+.|||++
T Consensus 79 ~~~GdrV~~~~~-~------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~ 133 (326)
T COG0604 79 FKVGDRVAALGG-V------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLA 133 (326)
T ss_pred cCCCCEEEEccC-C------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999987620 0 046999999999999999999999999999776 78899999
Q ss_pred HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+.. .++++|++|||+|+ |++|++++|+||++|+ .++++.+++++.++++++|++++++|.+ .++.+.++++. .
T Consensus 134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t--~ 208 (326)
T COG0604 134 LFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELT--G 208 (326)
T ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHc--C
Confidence 855 88999999999987 9999999999999998 5666667777777999999999999755 45888888764 3
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC--CCccccchhhhccceEEEEeehhHH
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--LEMTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
+.++|+|+|++|+ .++..+++.|+++|+++.+|... ...++++..++.+.++++|.+....
T Consensus 209 g~gvDvv~D~vG~-~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~ 271 (326)
T COG0604 209 GKGVDVVLDTVGG-DTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR 271 (326)
T ss_pred CCCceEEEECCCH-HHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec
Confidence 6689999999997 68889999999999999999776 3566788889999999999988644
No 15
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=6.2e-44 Score=331.26 Aligned_cols=310 Identities=85% Similarity=1.348 Sum_probs=266.4
Q ss_pred CCCCCCCCcccccchhhceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccc
Q 020768 1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80 (321)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e 80 (321)
|||++|++++-.-.++.|+++|+.+++.+++++.+.|.++++||+|||.++++|++|+..+.+...+.....+|.++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e 80 (364)
T PLN02702 1 MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE 80 (364)
T ss_pred CCCCccccCCCcccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccc
Confidence 89999999999999999999999988999999999999999999999999999999999887632222123457899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhh
Q 020768 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (321)
Q Consensus 81 ~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~ 160 (321)
++|+|+++|+++++|++||+|+..+..+|++|..|..+..++|++...++....+|+|++|+.++.+.++++|+++++.+
T Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~ 160 (364)
T PLN02702 81 CAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEE 160 (364)
T ss_pred eeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHH
Confidence 99999999999999999999999999999999999999999999865444334579999999999999999999999999
Q ss_pred hccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccH
Q 020768 161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240 (321)
Q Consensus 161 aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 240 (321)
+++..++++++++++..++.+|++|+|+|+|++|++++|+|+++|+..+++++++++|.++++++|++.+++++....++
T Consensus 161 aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (364)
T PLN02702 161 GAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDV 240 (364)
T ss_pred HhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccH
Confidence 88655677788888778899999999998899999999999999997788888899999999999999887765444566
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
.+.+.++....+.++|++||++|++..+..++++++++|+++.+|.......++...+..+++++.+++.
T Consensus 241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 241 ESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFR 310 (364)
T ss_pred HHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEecc
Confidence 6666555433356799999999977889999999999999999996544445566677889999999764
No 16
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.9e-44 Score=332.35 Aligned_cols=283 Identities=27% Similarity=0.361 Sum_probs=230.2
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++..+ ..++++++|.|+|+++||||||+++++|++|++.++|.+.......+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 688888743 24999999999999999999999999999999999886422111245889999999999999999 9999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC 174 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l 174 (321)
+||+|+..+...|++|.+|..+++++|.+...+ +....+|+|+||++++++.++++|++++ +++++..++++++.++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~ 158 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAI 158 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHH
Confidence 999999988889999999999999999875543 2223579999999999999999999999 5566666777666554
Q ss_pred HH-------cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC---ChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 020768 175 RR-------ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV---DDYRLSVAKELGADNIVKVSTNLQDIAEEV 244 (321)
Q Consensus 175 ~~-------~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~---~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~ 244 (321)
.. ..+++|++|+|+|+|++|++++|+||++|+ .++++++ +++|+++++++|++. +++.+ .++.+ .
T Consensus 159 ~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~~~~-~ 233 (355)
T cd08230 159 EQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TPVAE-V 233 (355)
T ss_pred HHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cchhh-h
Confidence 22 236789999999999999999999999999 5888876 688999999999986 44332 23322 1
Q ss_pred HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--Ccccc----chhhhccceEEEEeehhH
Q 020768 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVP----LTPAAARYLIYSFLFHFF 312 (321)
Q Consensus 245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~k~~~i~g~~~~~ 312 (321)
+ ...++|+||||+|.+..+..+++.++++|+++++|...+ ..+++ ...++.|++++.|+....
T Consensus 234 -~----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~ 302 (355)
T cd08230 234 -K----LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN 302 (355)
T ss_pred -h----hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc
Confidence 1 135799999999987789999999999999999997655 34455 356788999999987543
No 17
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=6.1e-44 Score=331.89 Aligned_cols=287 Identities=25% Similarity=0.410 Sum_probs=241.4
Q ss_pred hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
+|||+++..+ +.++++++|.|+|+++||+|||.++++|++|++.+.|... ...+|.++|||++|+|+++|+++++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~ 78 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL 78 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence 7999998754 5799999999999999999999999999999998887542 14568999999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc------------------CCCCCcceeEEEecCCcEEECCC
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PPVHGSLANQVVHPADLCFKLPD 154 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~G~~~~~~~v~~~~~~~ip~ 154 (321)
++||+|++.+..+|++|.+|..+.++.|.+.... +. ....|+|+||+.+++.+++++|+
T Consensus 79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 9999999999999999999999999999886432 00 01348999999999999999999
Q ss_pred CCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768 155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232 (321)
Q Consensus 155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~ 232 (321)
++++++++++. .+.++|+++ +..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|.++++++|++.+++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~ 238 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN 238 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999988665 567888776 5588999999999999999999999999999867899999999999999999998887
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCC--ccccchhhhccceEEEEee
Q 020768 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLE--MTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~ 309 (321)
+.+...++.+.++++. ++++|++||++|.+..+..++++++++ |+++++|....+ .+++...+ .+++++.|++
T Consensus 239 ~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 314 (369)
T cd08301 239 PKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTL 314 (369)
T ss_pred ccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEe
Confidence 6542234555555542 348999999999888889999999996 999999976543 33443334 4799999986
Q ss_pred h
Q 020768 310 H 310 (321)
Q Consensus 310 ~ 310 (321)
.
T Consensus 315 ~ 315 (369)
T cd08301 315 F 315 (369)
T ss_pred c
Confidence 5
No 18
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1e-43 Score=330.16 Aligned_cols=286 Identities=27% Similarity=0.406 Sum_probs=237.3
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++..+ +.++++++|.|+|+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence 788887754 57999999999999999999999999999999988875421 35689999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCcEEECCCCC
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDNV 156 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~G~~~~~~~v~~~~~~~ip~~~ 156 (321)
+||+|.+.+..+|++|++|+.+.+++|.+.... +. ...+|+|+||+.+++++++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 999999998889999999999999999874310 00 0124799999999999999999999
Q ss_pred Chhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768 157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (321)
Q Consensus 157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~ 234 (321)
++++++.++ ++.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+++|++++.+++|+++++++|++.++++.
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~ 238 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN 238 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence 999988765 778899987 568899999999999999999999999999997799999999999999999999988765
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCCC--ccccchhhhccceEEEEeeh
Q 020768 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHLE--MTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~ 310 (321)
+...++.+.++++. ++++|++|||+|++..+..++++++++ |+++.+|..... .+++...++ ++..+.|+..
T Consensus 239 ~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 313 (368)
T TIGR02818 239 DYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAF 313 (368)
T ss_pred ccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeec
Confidence 43344555555543 348999999999888899999999886 999999976432 333333344 3445777653
No 19
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-43 Score=326.71 Aligned_cols=284 Identities=30% Similarity=0.493 Sum_probs=241.9
Q ss_pred ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.+++.++++|+|.|.| +++||+|||.++++|++|+..+.... . ..+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~---~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-A---HYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-C---CCCCcccccceEEEEEEeCCCCCCCC
Confidence 7899998888899999999998 59999999999999999987543211 0 23588999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~ 176 (321)
+||+|++.+..+|++|++|..+.+++|.+....+. ..+|+|+||+.++++.++++|+++++++|++++++++++++++.
T Consensus 77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~ 155 (347)
T PRK10309 77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHL 155 (347)
T ss_pred CCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHh
Confidence 99999999999999999999999999988665543 46899999999999999999999999999887677778888877
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
..+++|++|||+|+|++|++++|+|+++|++.+++++++++|.++++++|++.+++.++. + .+.+.++. .+.++|
T Consensus 156 ~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~--~-~~~~~~~~--~~~~~d 230 (347)
T PRK10309 156 AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREM--S-APQIQSVL--RELRFD 230 (347)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCccc--C-HHHHHHHh--cCCCCC
Confidence 888999999999999999999999999999768889999999999999999988875432 2 23343332 245788
Q ss_pred -EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcccc---chhhhccceEEEEeehh
Q 020768 257 -VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVP---LTPAAARYLIYSFLFHF 311 (321)
Q Consensus 257 -~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~k~~~i~g~~~~ 311 (321)
++|||+|+..++..++++++++|+++++|......+++ +..+++|++++.|++.+
T Consensus 231 ~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 289 (347)
T PRK10309 231 QLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMN 289 (347)
T ss_pred eEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEecc
Confidence 99999999889999999999999999999765443333 34578899999998753
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1e-43 Score=329.01 Aligned_cols=287 Identities=22% Similarity=0.337 Sum_probs=234.6
Q ss_pred chhhceeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768 14 GEEVNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (321)
Q Consensus 14 ~~~~~~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v 92 (321)
-|+++++++..+ .+.+++.+++.|.|+++||+|||.++++|++|++.+.|.+.. ..+|.++|||++|+|+++|++|
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v 85 (360)
T PLN02586 9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF---TRYPIVPGHEIVGIVTKLGKNV 85 (360)
T ss_pred chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC---CCCCccCCcceeEEEEEECCCC
Confidence 344466666654 467999999999999999999999999999999988765321 3568999999999999999999
Q ss_pred CCCCCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch
Q 020768 93 KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE 165 (321)
Q Consensus 93 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~ 165 (321)
++|++||+|++.+. .+|++|.+|+.+.+++|++..+.. +...+|+|+||++++++.++++|+++++++|+.+.
T Consensus 86 ~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~ 165 (360)
T PLN02586 86 KKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLL 165 (360)
T ss_pred CccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhh
Confidence 99999999987654 479999999999999999765431 12347999999999999999999999999988665
Q ss_pred -hhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh-HHHHHHHcCCCeEEecCCCcccHHH
Q 020768 166 -PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY-RLSVAKELGADNIVKVSTNLQDIAE 242 (321)
Q Consensus 166 -~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~ 242 (321)
.+.++|+++.. ..+++|++|||.|+|++|++++|+||++|++ +++++.+++ +.+.++++|++.+++..+. +
T Consensus 166 ~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-----~ 239 (360)
T PLN02586 166 CAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTDP-----E 239 (360)
T ss_pred cchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCCH-----H
Confidence 56678888865 5578999999999999999999999999994 666655554 4567789999988874321 2
Q ss_pred HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
.+++. . +++|++||++|+...++.++++++++|+++.+|......++++..++.+++++.|+..+..
T Consensus 240 ~~~~~---~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 306 (360)
T PLN02586 240 KMKAA---I-GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGI 306 (360)
T ss_pred HHHhh---c-CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCH
Confidence 23332 1 3699999999987789999999999999999997655667888888889999999876443
No 21
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=4.9e-43 Score=325.69 Aligned_cols=287 Identities=25% Similarity=0.423 Sum_probs=238.4
Q ss_pred hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
+||++++... +.++++++|.|.|+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~ 78 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV 78 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence 6899987644 67999999999999999999999999999999988875432 3578999999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCcEEECCCC
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDN 155 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~G~~~~~~~v~~~~~~~ip~~ 155 (321)
++||+|++.+..+|++|++|+.+++++|++.... +. ....|+|+||+.++++.++++|++
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 158 (368)
T cd08300 79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE 158 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence 9999999988889999999999999999875311 00 012479999999999999999999
Q ss_pred CChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768 156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233 (321)
Q Consensus 156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~ 233 (321)
+++++++.+. ++.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+.+|++++++++|.++++++|++.++++
T Consensus 159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~ 238 (368)
T cd08300 159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP 238 (368)
T ss_pred CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence 9999988765 678899886 55889999999999999999999999999999779999999999999999999999886
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCC--CccccchhhhccceEEEEeeh
Q 020768 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~ 310 (321)
.+.++++.+.+.++. ++++|++||++|+...+..++++++++ |+++.+|.... ...++...+. ++.++.|+..
T Consensus 239 ~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (368)
T cd08300 239 KDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAF 314 (368)
T ss_pred cccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEe
Confidence 543335666665543 348999999999877899999999886 99999997643 2233333343 3456777653
No 22
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=5.8e-43 Score=323.15 Aligned_cols=290 Identities=37% Similarity=0.597 Sum_probs=251.0
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcccc-CC-------cCCCCCcccccceeEEEEEeC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-AD-------FVVKEPMVIGHECAGVIEKVG 89 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~-~~-------~~~~~p~~~G~e~vG~V~~vG 89 (321)
||++++.+++.++++++|.|.|+++||+||+.++++|++|+..+.+... .. ....+|.++|||++|+|+++|
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 80 (351)
T cd08233 1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80 (351)
T ss_pred CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence 7899998888999999999999999999999999999999887653211 00 012368999999999999999
Q ss_pred CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHH
Q 020768 90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV 169 (321)
Q Consensus 90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ 169 (321)
++++.|++||+|+..+..+|++|.+|+.+..++|.+..+.+....+|+|++|+.++.+.++++|+++++.+++++.++.+
T Consensus 81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t 160 (351)
T cd08233 81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV 160 (351)
T ss_pred CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence 99999999999999988899999999999999999876544323479999999999999999999999999887778889
Q ss_pred HHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 170 a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
||++++..++++|++|+|+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++.+ .++.+.++++.
T Consensus 161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~~~~- 237 (351)
T cd08233 161 AWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLT- 237 (351)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHHHHh-
Confidence 999997788999999999999999999999999999977888889999999999999999887543 45666665542
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
.+.++|++||++|+...++.++++|+++|+++.+|......+++...++.|+++|.|+..+
T Consensus 238 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~ 298 (351)
T cd08233 238 -GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICY 298 (351)
T ss_pred -CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEecc
Confidence 3457999999999877899999999999999999977656677887888999999998754
No 23
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.2e-43 Score=324.64 Aligned_cols=276 Identities=23% Similarity=0.306 Sum_probs=226.9
Q ss_pred hceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCc-CCCCCcccccceeEEEEEeCCCCCCC
Q 020768 17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 17 ~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
..+++++++++.++++|+|.|. +++||||||.++|||++|++.++|.+.... ...+|.++|||++|+|+++|.+ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~ 78 (341)
T cd08237 2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY 78 (341)
T ss_pred cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence 4678888899999999999994 999999999999999999999988642211 1357999999999999998764 79
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR 175 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~ 175 (321)
++||+|++.+..+|+ |+.|. ..++|.+..+.+. ..+|+|+||+++|+++++++|+++++++|++++++++++++++
T Consensus 79 ~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~ 154 (341)
T cd08237 79 KVGTKVVMVPNTPVE-KDEII--PENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAIS 154 (341)
T ss_pred CCCCEEEECCCCCch-hcccc--hhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHH
Confidence 999999998887787 44553 4577877665443 3579999999999999999999999999988889999999885
Q ss_pred H---cCCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 176 R---ANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 176 ~---~~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
. +.+++|++|||+|+|++|++++|+|++ +|..+|++++.+++|++++++++.+..++ + +.+
T Consensus 155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~~-- 219 (341)
T cd08237 155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IPE-- 219 (341)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hhh--
Confidence 3 457899999999999999999999996 66657889999999999998866543221 1 111
Q ss_pred CCCccEEEEcCC---CHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHH
Q 020768 252 GTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLI 314 (321)
Q Consensus 252 ~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~ 314 (321)
..++|+|||++| .+..+..++++++++|+++++|....+.+++...++.|++++.|+..+...
T Consensus 220 ~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~ 285 (341)
T cd08237 220 DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTRE 285 (341)
T ss_pred ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHH
Confidence 236999999999 456889999999999999999976555677877889999999998765433
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=6.5e-43 Score=322.62 Aligned_cols=284 Identities=24% Similarity=0.400 Sum_probs=239.6
Q ss_pred EEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 020768 21 AWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99 (321)
Q Consensus 21 ~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd 99 (321)
.++.+++. ++++++|.|.|+++||+|||.++++|++|++.+.+.... ...+|.++|||++|+|+++|++++.+ +||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 34555554 899999999999999999999999999999887443211 13568999999999999999999887 999
Q ss_pred EEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCC------CCChhhhccc-hhhHHHHH
Q 020768 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD------NVSLEEGAMC-EPLSVGLH 172 (321)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~------~~~~~~aa~~-~~~~~a~~ 172 (321)
+|++.+..+|++|.+|+.+++++|.+....+. ..+|+|+||+.++.+.++++|+ ++++++++.+ .++.++|+
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~ 157 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ 157 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence 99999999999999999999999988765543 3579999999999999999999 8888887755 57888999
Q ss_pred HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHh
Q 020768 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAM 251 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~ 251 (321)
+++...+++|++|+|+|+|++|++++|+|+++|+ .+++++++++|.++++++|++.+++..+.+ .++.+.++++. .
T Consensus 158 a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t--~ 234 (349)
T TIGR03201 158 AAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA--K 234 (349)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc--c
Confidence 9888889999999999999999999999999999 688899999999999999999888754322 23444444442 3
Q ss_pred CCCcc----EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768 252 GTGID----VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 252 ~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
+.++| ++|||+|+...++.++++++++|+++++|......++++..++.+++++.|++.+
T Consensus 235 ~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~ 298 (349)
T TIGR03201 235 ARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGC 298 (349)
T ss_pred cCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecC
Confidence 45676 8999999988888999999999999999987655677777888889999998753
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-42 Score=323.49 Aligned_cols=278 Identities=21% Similarity=0.344 Sum_probs=230.5
Q ss_pred CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcC
Q 020768 26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP 105 (321)
Q Consensus 26 ~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~ 105 (321)
++.+++.+++.|.|+++||+|||.++++|++|++.+.|.+.. ..+|.++|||++|+|+++|+++++|++||+|++.+
T Consensus 16 ~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~---~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~ 92 (375)
T PLN02178 16 SGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF---SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92 (375)
T ss_pred CCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC---CCCCcccCceeeEEEEEECCCCCccCCCCEEEEcC
Confidence 467889999999999999999999999999999998875421 24689999999999999999999999999998766
Q ss_pred Cc-cCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHHc
Q 020768 106 GI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRA 177 (321)
Q Consensus 106 ~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~~ 177 (321)
.. +|++|.+|+.+++++|++..+.. +...+|+|+||+.+++++++++|+++++++|+.+. ...++|+++...
T Consensus 93 ~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~ 172 (375)
T PLN02178 93 IIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYY 172 (375)
T ss_pred ccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHh
Confidence 54 69999999999999999865321 12347999999999999999999999999988665 556788888654
Q ss_pred C--CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 178 N--IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 178 ~--~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
. .++|++|+|.|+|++|++++|+|+++|+ .+++++.++ ++.++++++|++.++++.+ . +.+.+. . .+
T Consensus 173 ~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~~~---~-~~ 242 (375)
T PLN02178 173 GMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD--S---QKMKEA---V-GT 242 (375)
T ss_pred CCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--H---HHHHHh---h-CC
Confidence 3 3689999999999999999999999999 577776664 4578889999998887532 1 233332 2 36
Q ss_pred ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHhh
Q 020768 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIVL 316 (321)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~ 316 (321)
+|++|||+|.+..+..++++++++|+++.+|....+.++++..+++|+++++|+..+....+
T Consensus 243 ~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 304 (375)
T PLN02178 243 MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKET 304 (375)
T ss_pred CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHH
Confidence 99999999987788999999999999999997655567888888999999999987554433
No 26
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.9e-42 Score=321.31 Aligned_cols=287 Identities=27% Similarity=0.457 Sum_probs=242.5
Q ss_pred hceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 17 ~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
+||++++.+. +.++++++|.|.++++||+|||.++++|++|++.+.|... ..+|.++|||++|+|+++|++++++
T Consensus 2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08277 2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNL 77 (365)
T ss_pred ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccC
Confidence 5899988754 5699999999999999999999999999999999887542 3568999999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc-------------------CCCCCcceeEEEecCCcEEECCCCC
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVHGSLANQVVHPADLCFKLPDNV 156 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~G~~~~~~~v~~~~~~~ip~~~ 156 (321)
++||+|++.+..+|++|.+|..+.+++|++....+. ....|+|+||+.++.++++++|+++
T Consensus 78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 999999998888999999999999999987543210 0125899999999999999999999
Q ss_pred Chhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768 157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (321)
Q Consensus 157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~ 234 (321)
++++++.+. ++.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++.+++..
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 999988765 778899886 568899999999999899999999999999997789999999999999999999888755
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEcCCCC-CccccchhhhccceEEEEeehh
Q 020768 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
+...++.+.++++. +.++|++|||+|.+..+..++++++++ |+++.+|...+ ..+++...++. ++++.|++.+
T Consensus 238 ~~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~ 312 (365)
T cd08277 238 DSDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFG 312 (365)
T ss_pred cccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecC
Confidence 43334455555442 358999999999878889999999885 99999997643 34566656664 8999998764
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=6.6e-42 Score=313.31 Aligned_cols=267 Identities=23% Similarity=0.289 Sum_probs=231.5
Q ss_pred CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 020768 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (321)
Q Consensus 27 ~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~ 106 (321)
..++++++|.|.|+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 89 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWL 89 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCc
Confidence 46899999999999999999999999999999998875421 234789999999999999999999999999988764
Q ss_pred -ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHHcCCCCCCE
Q 020768 107 -ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETN 184 (321)
Q Consensus 107 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~ 184 (321)
.+|+.|.+|+.+.+++|++..+.+. ..+|+|+||+.+++++++++|+++++.+++.+ .++.+||++++.+++++|++
T Consensus 90 ~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~ 168 (329)
T TIGR02822 90 RRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGR 168 (329)
T ss_pred cCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCE
Confidence 3799999999999999998776543 45799999999999999999999999988754 47788999998889999999
Q ss_pred EEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264 (321)
Q Consensus 185 vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 264 (321)
|||+|+|++|++++|+|+.+|+ ++++++++++|.++++++|++++++..+.. ..++|+++++.+.
T Consensus 169 VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------------~~~~d~~i~~~~~ 233 (329)
T TIGR02822 169 LGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDTP--------------PEPLDAAILFAPA 233 (329)
T ss_pred EEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccccC--------------cccceEEEECCCc
Confidence 9999999999999999999999 588899999999999999999988642110 2368999999888
Q ss_pred HHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768 265 NKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF 312 (321)
Q Consensus 265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~ 312 (321)
...+..++++++++|+++++|.... ..+++...++.|++++.|++...
T Consensus 234 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 282 (329)
T TIGR02822 234 GGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT 282 (329)
T ss_pred HHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC
Confidence 8899999999999999999997533 34577777888999999987643
No 28
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-40 Score=308.61 Aligned_cols=286 Identities=22% Similarity=0.311 Sum_probs=235.0
Q ss_pred hhhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768 15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (321)
Q Consensus 15 ~~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~ 93 (321)
++.+++++..++ +.+.+++++.|.|+++||+|||.++++|++|++.+.|.+.. ..+|.++|||++|+|+++|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~v~ 83 (357)
T PLN02514 7 EKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_pred CceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCCcc
Confidence 344888888866 57999999999999999999999999999999988775421 24688999999999999999999
Q ss_pred CCCCCCEEEEcCCc-cCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch-
Q 020768 94 TLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE- 165 (321)
Q Consensus 94 ~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~- 165 (321)
+|++||+|++.+.. +|++|.+|+.+.+++|.+..+.. +...+|+|+||+.++...++++|+++++++|+.+.
T Consensus 84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 163 (357)
T PLN02514 84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC 163 (357)
T ss_pred cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence 99999999876544 79999999999999998763211 12247999999999999999999999999988654
Q ss_pred hhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHH
Q 020768 166 PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEE 243 (321)
Q Consensus 166 ~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~ 243 (321)
.+.++|+++.. ...++|++++|+|+|++|++++|+||++|+ .+++++.++++.+ .++++|++.+++..+. +.
T Consensus 164 ~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-----~~ 237 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSDA-----AE 237 (357)
T ss_pred hHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCCh-----HH
Confidence 66788988865 455799999999889999999999999999 4666767766654 4567999877654321 22
Q ss_pred HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768 244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
+.+. ..++|++||++|....++.++++++++|+++.+|......+++...++.|++++.|++....
T Consensus 238 ~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 303 (357)
T PLN02514 238 MQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSM 303 (357)
T ss_pred HHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCH
Confidence 3332 24799999999987789999999999999999997755567788888899999999976544
No 29
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.2e-40 Score=304.40 Aligned_cols=282 Identities=27% Similarity=0.441 Sum_probs=241.7
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
||++++.+++.++++++|.|.|+++|++||+.++++|++|+..+.|..+. .++|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence 78999988889999999999999999999999999999999988775421 246899999999999999999999999
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~ 177 (321)
||+|++.+..+|+.|.+|..+++++|.++.+.+. ..+|+|++|+.++..+++++|+++++.+++...++.+++++.+..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~ 156 (339)
T PRK10083 78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRT 156 (339)
T ss_pred CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhc
Confidence 9999999999999999999999999998776443 347999999999999999999999998887666788888767778
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
++++|++|+|+|+|++|++++|+|+. +|+..+++++++++|.++++++|++.++++.+ .++.+.+.. .+.++|
T Consensus 157 ~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~g~~~d 230 (339)
T PRK10083 157 GPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----KGIKPT 230 (339)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----CCCCCC
Confidence 99999999999999999999999996 69977888999999999999999998887543 344443321 134567
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~ 309 (321)
++||++|.+..+..++++++++|+++.+|.......++...+..+++++.+..
T Consensus 231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 283 (339)
T PRK10083 231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSR 283 (339)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEe
Confidence 99999998778999999999999999999765444455555667888888864
No 30
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.5e-40 Score=306.70 Aligned_cols=290 Identities=32% Similarity=0.500 Sum_probs=242.8
Q ss_pred eeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC---
Q 020768 19 MAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT--- 94 (321)
Q Consensus 19 ~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~--- 94 (321)
|++++.+++ .+++++++.|.|+++||+|||.++++|+.|+....|.+.. ..+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~ 78 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA 78 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence 688888765 8999999999999999999999999999999988875421 356889999999999999999986
Q ss_pred ---CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC------CCCCcceeEEEecCC-cEEECCCCCChhhhccc
Q 020768 95 ---LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMC 164 (321)
Q Consensus 95 ---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~G~~~~~~~v~~~-~~~~ip~~~~~~~aa~~ 164 (321)
|++||+|+..+..+|++|.+|+.+.+++|.+..+++.. ...|+|++|+.++++ .++++|++++..+++++
T Consensus 79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 99999999999899999999999999999887655432 246999999999986 79999999998888876
Q ss_pred -hhhHHHHHHHHHc-CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCc-ccHH
Q 020768 165 -EPLSVGLHACRRA-NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIA 241 (321)
Q Consensus 165 -~~~~~a~~~l~~~-~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~ 241 (321)
.++.+||++++.. ..++|++|||+|+|++|++++|+|+++|++.++++++++++.++++++|++.+++++... .++.
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 238 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRR 238 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHH
Confidence 5888999999764 445999999998899999999999999996688888999999999999999888764321 1122
Q ss_pred HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeehhHH
Q 020768 242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
+.+.++ ..+.++|++|||+|+...+..++++++++|+++.+|.... ...++...++.+++++.|++.+..
T Consensus 239 ~~i~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (361)
T cd08231 239 AIVRDI--TGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDP 310 (361)
T ss_pred HHHHHH--hCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCc
Confidence 334443 2356899999999987788999999999999999996643 234555557889999999886543
No 31
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=8.7e-40 Score=304.27 Aligned_cols=288 Identities=26% Similarity=0.398 Sum_probs=238.9
Q ss_pred hhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 16 ~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
.+||++++..+ +.++++++|.|++.++||+|||.++++|++|++.+.|... ..+|+++|||++|+|+++|++++.
T Consensus 6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~ 81 (373)
T cd08299 6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV----TPFPVILGHEAAGIVESVGEGVTT 81 (373)
T ss_pred ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC----CCCCccccccceEEEEEeCCCCcc
Confidence 45899998754 5799999999999999999999999999999999887541 356889999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCcEEECCC
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLPD 154 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~G~~~~~~~v~~~~~~~ip~ 154 (321)
|++||+|++.+..+|++|.+|+.+++++|.+....+. ....|+|+||+++++++++++|+
T Consensus 82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 9999999999888999999999999999987543210 00358999999999999999999
Q ss_pred CCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe
Q 020768 155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232 (321)
Q Consensus 155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~ 232 (321)
++++.+++++. ++.++|+++ +.+.+++|++|+|+|+|++|++++++|+++|+..|++++++++|.+.++++|++.+++
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~ 241 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECIN 241 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence 99999988765 778899886 5688999999999988999999999999999866899999999999999999998887
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHc-ccCCEEEEEcCCCCCccccchh-hhccceEEEEeeh
Q 020768 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHLEMTVPLTP-AAARYLIYSFLFH 310 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i~g~~~ 310 (321)
..+...++.+.+.++. ++++|++|||+|++..+..++..+ +++|+++.+|......++++.+ .+.++.++.|++.
T Consensus 242 ~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 318 (373)
T cd08299 242 PQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVF 318 (373)
T ss_pred ccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEe
Confidence 6543334555555542 357999999999877777766655 6799999999764433444443 2457889998865
No 32
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.7e-40 Score=301.29 Aligned_cols=260 Identities=20% Similarity=0.249 Sum_probs=211.0
Q ss_pred hceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecc-cccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGIC-GSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 17 ~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~-~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
+||++++.+++.+++++.|.|+|+++||+|||.++++| ++|+..+.|.++......+|.++|||++|+|+++|+++ +|
T Consensus 1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~ 79 (308)
T TIGR01202 1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF 79 (308)
T ss_pred CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence 47899998888999999999999999999999999996 69998888764321113569999999999999999998 69
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR 175 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~ 175 (321)
++||+|++. |..|..|.. ...|+|+||++++++.++++|++++++. +.++++++||++++
T Consensus 80 ~vGdrV~~~----~~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~ 139 (308)
T TIGR01202 80 RPGDRVFVP----GSNCYEDVR---------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVA 139 (308)
T ss_pred CCCCEEEEe----Ccccccccc---------------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHH
Confidence 999999874 223333211 1359999999999999999999998754 55667789999987
Q ss_pred HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
... .++++++|+|+|++|++++|+|+++|++.+++++.+++|++.+.++ .+++..+ + .+.++
T Consensus 140 ~~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g~ 201 (308)
T TIGR01202 140 GAE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRDY 201 (308)
T ss_pred hcc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCCC
Confidence 643 4689999999999999999999999997777888888887776653 3333211 0 14679
Q ss_pred cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHHHh
Q 020768 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFLIV 315 (321)
Q Consensus 256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~ 315 (321)
|++|||+|++..++.++++++++|+++++|....+.++++..++.|++++.|+..+....
T Consensus 202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 261 (308)
T TIGR01202 202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGD 261 (308)
T ss_pred CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhH
Confidence 999999999878999999999999999999876667788888899999999987654443
No 33
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=9.8e-41 Score=279.19 Aligned_cols=260 Identities=28% Similarity=0.363 Sum_probs=228.5
Q ss_pred cchhhceeEEEc---cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768 13 DGEEVNMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89 (321)
Q Consensus 13 ~~~~~~~a~~~~---~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG 89 (321)
..|+..|-++++ +...+++++.|.|+|.++|++||.+|+|+|+.|..+++|.+. +.+.|++||.|++|+|+++|
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG 80 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVG 80 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEec
Confidence 445667777777 347899999999999999999999999999999999999873 26789999999999999999
Q ss_pred CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhH
Q 020768 90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLS 168 (321)
Q Consensus 90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~ 168 (321)
++|+++++||+|... ...|.|+|+..+|...++++|+.+++.+||++ ....
T Consensus 81 ~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~l 132 (336)
T KOG1197|consen 81 EGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGL 132 (336)
T ss_pred CCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHH
Confidence 999999999999865 25699999999999999999999999998754 4788
Q ss_pred HHHHHHHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 020768 169 VGLHACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246 (321)
Q Consensus 169 ~a~~~l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~ 246 (321)
|||..++. .++++|++|||+.| |++|++++|++++.|. .+|++.++.+|.+.+++.|+++.|+++. +|+.+.+.+
T Consensus 133 TAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~k 209 (336)
T KOG1197|consen 133 TAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVKK 209 (336)
T ss_pred HHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHHh
Confidence 89988854 78999999999976 9999999999999999 7889999999999999999999999865 688887777
Q ss_pred HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~ 309 (321)
+. .++|+|+++|.+|. +++...+.+|++.|.++.+|+.++ ..++++..|-.|.+++.-.+
T Consensus 210 iT--ngKGVd~vyDsvG~-dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrps 270 (336)
T KOG1197|consen 210 IT--NGKGVDAVYDSVGK-DTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPS 270 (336)
T ss_pred cc--CCCCceeeeccccc-hhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHh
Confidence 63 48999999999997 699999999999999999997765 46788887777777665443
No 34
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=3.5e-39 Score=303.77 Aligned_cols=281 Identities=25% Similarity=0.364 Sum_probs=225.1
Q ss_pred hceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhh-hccccCCc---CCCCCcccccceeEEEEEeCCCC
Q 020768 17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADF---VVKEPMVIGHECAGVIEKVGSEV 92 (321)
Q Consensus 17 ~~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~-~g~~~~~~---~~~~p~~~G~e~vG~V~~vG~~v 92 (321)
+||++++.+++.++++|+|.|.|+++||+|||.++++|++|++.+ .|...... ...+|+++|||++|+|+++|++|
T Consensus 2 ~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v 81 (410)
T cd08238 2 KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW 81 (410)
T ss_pred CcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence 589999999889999999999999999999999999999999976 44321110 12468899999999999999999
Q ss_pred C-CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----cEEECCCCCChhhhccchhh
Q 020768 93 K-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCEPL 167 (321)
Q Consensus 93 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~----~~~~ip~~~~~~~aa~~~~~ 167 (321)
+ .|++||+|++.+...|++|..|.. + + ...+|+|+||++++++ .++++|+++++.+|++++++
T Consensus 82 ~~~~~vGdrV~~~~~~~c~~~~~c~~-~----------g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl 149 (410)
T cd08238 82 QGKYKPGQRFVIQPALILPDGPSCPG-Y----------S-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL 149 (410)
T ss_pred cCCCCCCCEEEEcCCcCCCCCCCCCC-c----------c-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence 8 599999999998888998887731 1 1 1357999999999987 68999999999999877665
Q ss_pred HHHH---HHH---------HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcC--CCeEEEEeCChhHHHHHHHc-------
Q 020768 168 SVGL---HAC---------RRANIGPETNVLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDYRLSVAKEL------- 225 (321)
Q Consensus 168 ~~a~---~~l---------~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g--~~~vv~v~~~~~~~~~~~~~------- 225 (321)
++++ .++ +.+++++|++|+|+|+ |++|++++|+|+++| +..|++++.+++|+++++++
T Consensus 150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~ 229 (410)
T cd08238 150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS 229 (410)
T ss_pred HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence 5543 222 3467899999999986 999999999999975 45689999999999999997
Q ss_pred -CCC-eEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC-CC--Cccccchhhhc
Q 020768 226 -GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-HL--EMTVPLTPAAA 300 (321)
Q Consensus 226 -g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~~~~ 300 (321)
|++ .+++..+ ..++.+.++++. .+.++|++||++|.+..++.++++++++|+++.++.. .. ..++++..+++
T Consensus 230 ~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~ 306 (410)
T cd08238 230 RGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY 306 (410)
T ss_pred cCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhh
Confidence 665 3455322 135555555542 3568999999999888999999999999998877543 22 35678888999
Q ss_pred cceEEEEeehhH
Q 020768 301 RYLIYSFLFHFF 312 (321)
Q Consensus 301 k~~~i~g~~~~~ 312 (321)
|++++.|+....
T Consensus 307 ~~~~i~g~~~~~ 318 (410)
T cd08238 307 NNTHYVGTSGGN 318 (410)
T ss_pred cCcEEEEeCCCC
Confidence 999999987543
No 35
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=5.6e-39 Score=294.54 Aligned_cols=282 Identities=24% Similarity=0.362 Sum_probs=242.5
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.++ +.++++++|.|.++++||+|||.++++|++|+..+.|..+. ...|.++|||++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~ 77 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK 77 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence 789999877 68999999999999999999999999999999988775422 34588999999999999999999999
Q ss_pred CCCEEEEcC-CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768 97 PGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (321)
Q Consensus 97 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l 174 (321)
+||+|++.+ ...|++|.+|..++++.|.+....+. ...|++++|+.++...++++|+++++.+++.+. ++.++|+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 156 (333)
T cd08296 78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL 156 (333)
T ss_pred CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 999998854 45899999999999999998765432 346999999999999999999999998887554 677888888
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
+...++++++|||+|+|++|++++|+|+++|+ .++++++++++.++++++|++.++++.. .++.+.+.++ .+
T Consensus 157 ~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~~ 228 (333)
T cd08296 157 RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----GG 228 (333)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----CC
Confidence 77789999999999999999999999999999 5888889999999999999998887543 3455444443 46
Q ss_pred ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
+|++||+.|.+..+...+++++++|+++.+|......+++...++.|++++.|+...
T Consensus 229 ~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 285 (333)
T cd08296 229 AKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSG 285 (333)
T ss_pred CCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcC
Confidence 999999998778899999999999999999977655567777788999999998653
No 36
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7.8e-39 Score=295.61 Aligned_cols=286 Identities=30% Similarity=0.417 Sum_probs=239.4
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
||++++.+++.+++++.+.|.+.++||+|||.++++|++|++.+.+.+.. .+.|.++|||++|+|+++|++++++++
T Consensus 1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence 79999998888999999999999999999999999999999887765422 355889999999999999999999999
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCcc--ccccCCCCCcceeEEEecCC--cEEECCCCCChhhhccc-hhhHHHHH
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMK--FFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVGLH 172 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~-~~~~~a~~ 172 (321)
||+|+..+..+|++|..|..+++++|.+.. +..+...+|+|+||+.++.. .++++|+++++.+++.+ .++.++++
T Consensus 78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~ 157 (351)
T cd08285 78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH 157 (351)
T ss_pred CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence 999999887899999999999999998752 11112357999999999974 89999999999998866 47788999
Q ss_pred HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+++.+.+++|++|||+|+|++|++++|+|+++|...++++++++++.++++++|++.+++++. .++.+.+.++. .+
T Consensus 158 ~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~ 233 (351)
T cd08285 158 GAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--GG 233 (351)
T ss_pred HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--CC
Confidence 887788999999999988999999999999999977899999999999999999998887543 35555555542 35
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc--cccchh--hhccceEEEEeeh
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM--TVPLTP--AAARYLIYSFLFH 310 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~--~~~k~~~i~g~~~ 310 (321)
.++|+++|++|++..+..++++|+++|+++.+|...... .++..+ ...+..++.+.+.
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 295 (351)
T cd08285 234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC 295 (351)
T ss_pred CCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeec
Confidence 679999999998788999999999999999999765432 333222 2356677776553
No 37
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.8e-38 Score=293.06 Aligned_cols=289 Identities=28% Similarity=0.516 Sum_probs=242.1
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcccc--CC----cCCCCCcccccceeEEEEEeCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--AD----FVVKEPMVIGHECAGVIEKVGSE 91 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~--~~----~~~~~p~~~G~e~vG~V~~vG~~ 91 (321)
||++++++++.+++++.+.|+++++||+||+.++++|+.|+..+.|... .. ....+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~ 80 (350)
T cd08256 1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG 80 (350)
T ss_pred CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence 7899998888999999999999999999999999999999998876421 00 00145778999999999999999
Q ss_pred CC--CCCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc-CCCCCcceeEEEecCC-cEEECCCCCChhhhccchhh
Q 020768 92 VK--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPL 167 (321)
Q Consensus 92 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~~~v~~~-~~~~ip~~~~~~~aa~~~~~ 167 (321)
++ +|++||+|+..+..+|++|.+|+.+..+.|+....++. ....|+|++|+.++++ .++++|+++++.+++.+.++
T Consensus 81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~ 160 (350)
T cd08256 81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL 160 (350)
T ss_pred cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence 99 89999999999999999999999999999987654332 1257999999999987 67899999999888866788
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768 168 SVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 168 ~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~ 247 (321)
.++|++++.+++++|++|+|.|+|++|++++|+|+++|+..++++++++++.++++++|++.+++.. ..++.+.+.++
T Consensus 161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~ 238 (350)
T cd08256 161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKEL 238 (350)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHH
Confidence 8999998778999999999977799999999999999997788899999999999999998877643 24555556554
Q ss_pred HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhh-hccceEEEEeeh
Q 020768 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPA-AARYLIYSFLFH 310 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~k~~~i~g~~~ 310 (321)
. .+.++|++||++|++..+..++++++++|+++.+|......++++..+ ..+++++.|+..
T Consensus 239 ~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 300 (350)
T cd08256 239 T--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHL 300 (350)
T ss_pred h--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEecc
Confidence 2 356799999999976678899999999999999996554455565544 467888888654
No 38
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.8e-38 Score=292.29 Aligned_cols=290 Identities=55% Similarity=0.938 Sum_probs=242.0
Q ss_pred eEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 020768 20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99 (321)
Q Consensus 20 a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd 99 (321)
+.++.++..+++++.|.|.+.++||+|||.++++|+.|+..+.+...+......|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 80 (343)
T cd05285 1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD 80 (343)
T ss_pred CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCC
Confidence 35777888999999999999999999999999999999987643221211124577899999999999999999999999
Q ss_pred EEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCC
Q 020768 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179 (321)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~ 179 (321)
+|++.+..+|++|.+|..+.+++|++..+.+.....|+|++|+.++++.++++|+++++.+++.+.++++++++++.+.+
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~ 160 (343)
T cd05285 81 RVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGV 160 (343)
T ss_pred EEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCC
Confidence 99999888999999999999999998755443345799999999999999999999999998877788889988878999
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcc-cHHHHHHHHHHHhCCCccEE
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~d~v 258 (321)
++|+++||+|+|++|++++|+|+++|.++++++++++++.++++++|++.+++.++... .+.+.+.++ ..+.++|++
T Consensus 161 ~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~--~~~~~~d~v 238 (343)
T cd05285 161 RPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAEL--LGGKGPDVV 238 (343)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHH--hCCCCCCEE
Confidence 99999999988999999999999999965888888899999999999999887553211 124445444 235679999
Q ss_pred EEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768 259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
|||+|+...++..+++++++|+++.+|.......+++..+..+++++.++..+
T Consensus 239 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (343)
T cd05285 239 IECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRY 291 (343)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccC
Confidence 99999866889999999999999999966544556666777889999887643
No 39
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4.4e-38 Score=292.13 Aligned_cols=285 Identities=29% Similarity=0.430 Sum_probs=240.7
Q ss_pred hhceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 16 ~~~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
++|||+++.++ +.+++++.+.|.++++||+|||.++++|++|+....+.++ ...|.++|||++|+|+++|++++.
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~ 76 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTG 76 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence 46999999864 5789999999999999999999999999999999887542 345889999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCcccc---cc-------------------CCCCCcceeEEEecCCcEEEC
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-------------------PPVHGSLANQVVHPADLCFKL 152 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~G~~~~~~~v~~~~~~~i 152 (321)
|++||+|++.+. .|++|.+|+.+..++|.+.... +. ....|+|++|+.+++++++++
T Consensus 77 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i 155 (365)
T cd08278 77 LKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV 155 (365)
T ss_pred CCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence 999999999764 8999999999999999865321 00 012589999999999999999
Q ss_pred CCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE
Q 020768 153 PDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI 230 (321)
Q Consensus 153 p~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v 230 (321)
|+++++.+++.+. .+.+|+.++ +...+++|++|||+|+|++|++++|+|+++|++.+++++.+++|.++++++|++.+
T Consensus 156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~ 235 (365)
T cd08278 156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHV 235 (365)
T ss_pred CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEE
Confidence 9999998887554 677788776 45788999999999889999999999999999779999999999999999999888
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC--CCccccchhhhccceEEEEe
Q 020768 231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--LEMTVPLTPAAARYLIYSFL 308 (321)
Q Consensus 231 i~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~ 308 (321)
++... .++.+.+.++. +.++|+++||+|.+..+..++++++++|+++.+|... ....+++..++.+++++.++
T Consensus 236 i~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T cd08278 236 INPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGV 310 (365)
T ss_pred ecCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEe
Confidence 87543 35555555542 5689999999998778899999999999999999653 33567777777899999887
Q ss_pred eh
Q 020768 309 FH 310 (321)
Q Consensus 309 ~~ 310 (321)
..
T Consensus 311 ~~ 312 (365)
T cd08278 311 IE 312 (365)
T ss_pred ec
Confidence 53
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=3.6e-38 Score=289.75 Aligned_cols=287 Identities=29% Similarity=0.477 Sum_probs=243.7
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++..+ +.+++.+.+.|.++++|++|||.++++|++|+....|.+.......+|.++|+|++|+|+++|++++.|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 689998865 6799999999999999999999999999999998877553322345688999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~ 175 (321)
+||+|+..+...|+.|..|..+..++|++..+.+. ..+|+|++|+.+++++++++|+++++++++.+. .+.+||+++.
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~ 159 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK 159 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 99999999888999999999999999999887765 568999999999999999999999999888664 6788999985
Q ss_pred H--cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 176 R--ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 176 ~--~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
. ..+.++++|||+|+|++|++++|+|+.+|...++++++++++.+.++++|++++++.+. . +.+.++++. .+.
T Consensus 160 ~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~--~~~ 234 (340)
T cd05284 160 KALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELT--GGR 234 (340)
T ss_pred HhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHh--CCC
Confidence 5 36889999999999779999999999999326788888899999999999988877543 2 555555542 246
Q ss_pred CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
++|+++|++|+....+.++++|+++|+++.+|.... .+++...++.|++++.++...
T Consensus 235 ~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 291 (340)
T cd05284 235 GADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWG 291 (340)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecc
Confidence 799999999987788999999999999999996643 445555556799999987643
No 41
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6.5e-38 Score=291.01 Aligned_cols=283 Identities=28% Similarity=0.441 Sum_probs=238.1
Q ss_pred eeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 19 MAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 19 ~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
|++++.. .+.++++++|.|.++++||+||+.++++|+.|++.+.+... ..+|.++|||++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence 5777764 45899999999999999999999999999999998877542 345789999999999999999999999
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCccccccC--------------------CCCCcceeEEEecCCcEEECCCCCC
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADLCFKLPDNVS 157 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~G~~~~~~~v~~~~~~~ip~~~~ 157 (321)
||+|++.+..+|++|.+|..+.+++|.+....+.. ...|+|++|+.++++.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 99999998889999999999999999875543210 0247999999999999999999999
Q ss_pred hhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC
Q 020768 158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235 (321)
Q Consensus 158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~ 235 (321)
+.+++.+. .+.++|+++ +.+.+++|++|||+|+|++|++++|+|+++|+..++++++++++.++++++|++.+++..+
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~ 237 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD 237 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc
Confidence 99888665 788899886 4588999999999988999999999999999977888888999999999999998887544
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc-cCCEEEEEcCCC--CCccccchhhhccceEEEEee
Q 020768 236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGH--LEMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~k~~~i~g~~ 309 (321)
.+.++.+.+.++. +.++|++||++|....+..++++++ ++|+++.+|... ....++...+ .++.++.|++
T Consensus 238 ~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~ 310 (365)
T cd05279 238 QDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTV 310 (365)
T ss_pred ccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEe
Confidence 3225555555542 4689999999997778899999999 999999999653 3455666666 6888998874
No 42
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=7e-38 Score=292.82 Aligned_cols=288 Identities=30% Similarity=0.479 Sum_probs=240.0
Q ss_pred ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.+++.++++++|.|.| +++||+||+.++++|++|+..+.|.+.. .++|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence 7899998889999999999998 5999999999999999999998876533 34688999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCcccc---------------cc----CCCCCcceeEEEecCC--cEEECCCC
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHGSLANQVVHPAD--LCFKLPDN 155 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~G~~~~~~~v~~~--~~~~ip~~ 155 (321)
+||+|+..+...|++|.+|+.+.+++|.+.... +. ...+|+|++|++++.+ .++++|++
T Consensus 78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~ 157 (386)
T cd08283 78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD 157 (386)
T ss_pred CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence 999999998889999999999999999875321 10 0246999999999987 89999999
Q ss_pred CChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768 156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (321)
Q Consensus 156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~ 234 (321)
+++.+|+.+. .+.+||++++.+++++|++|||+|+|.+|++++++|++.|...+++++.++++.+++++++...++++.
T Consensus 158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~ 237 (386)
T cd08283 158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFE 237 (386)
T ss_pred CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCC
Confidence 9999988654 788999999778899999999998899999999999999986699999999999999998544566543
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEcCCC---------------------HHHHHHHHHHcccCCEEEEEcCCCC-Ccc
Q 020768 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---------------------NKTMSTALSATRAGGKVCLVGMGHL-EMT 292 (321)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~---------------------~~~~~~~~~~l~~~G~~v~~g~~~~-~~~ 292 (321)
.. .++.+.+.++. .+.++|++||++|+ ...+..++++++++|+++.+|.... ...
T Consensus 238 ~~-~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 238 EV-DDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cc-hHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 32 13555555542 24579999999975 2467889999999999999997654 344
Q ss_pred ccchhhhccceEEEEeehh
Q 020768 293 VPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 293 ~~~~~~~~k~~~i~g~~~~ 311 (321)
++...++.|++++.+...+
T Consensus 315 ~~~~~~~~~~~~i~~~~~~ 333 (386)
T cd08283 315 FPIGAAMNKGLTLRMGQTH 333 (386)
T ss_pred cCHHHHHhCCcEEEeccCC
Confidence 5665678899999997543
No 43
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=7.8e-38 Score=287.81 Aligned_cols=286 Identities=31% Similarity=0.536 Sum_probs=239.7
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.++ +.+++.++|.|.|+++||+||+.++++|++|+.++.+.........+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 678888755 4699999999999999999999999999999987765322211234678999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~ 176 (321)
+||+|+..+..+|+.|.+|..+.+++|+...+.+ ...+|+|++|+.++.+.++++|+++++.+++.+.++.++++++..
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~ 159 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS 159 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc
Confidence 9999999999999999999999999998765443 346799999999999999999999999888866677777665533
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
...+|++|+|+|+|++|++++|+|+++|+++++++++++++.++++++|++.++++++ .++.+.++++. .+.++|
T Consensus 160 -~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~~~~~d 234 (341)
T PRK05396 160 -FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--MTEGFD 234 (341)
T ss_pred -CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--CCCCCC
Confidence 3468999999888999999999999999966888888899999999999998887543 45555555542 356899
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~ 309 (321)
++|||.|....++..+++|+++|+++.+|.......++...+.++++++.|+.
T Consensus 235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~ 287 (341)
T PRK05396 235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIY 287 (341)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEE
Confidence 99999998788899999999999999999765545556677888999998864
No 44
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=6.3e-38 Score=293.90 Aligned_cols=296 Identities=22% Similarity=0.214 Sum_probs=242.8
Q ss_pred ccchhhceeEEEcc-----C-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCc------C-CCCCcccc
Q 020768 12 EDGEEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF------V-VKEPMVIG 78 (321)
Q Consensus 12 ~~~~~~~~a~~~~~-----~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~------~-~~~p~~~G 78 (321)
-..|.+||++++.. + +.++++++|.|.++++||+|||.++++|++|+..+.+...... . ...+.++|
T Consensus 7 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G 86 (393)
T cd08246 7 GVVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGG 86 (393)
T ss_pred CcCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccc
Confidence 34788999998852 1 3588999999999999999999999999999988765411100 0 11235899
Q ss_pred cceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCCh
Q 020768 79 HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSL 158 (321)
Q Consensus 79 ~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~ 158 (321)
||++|+|+++|++++.|++||+|++.+...|++|+.|..+..++|....+++....+|+|++|+.++..+++++|+++++
T Consensus 87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~ 166 (393)
T cd08246 87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSW 166 (393)
T ss_pred cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCH
Confidence 99999999999999999999999999999999999999999999998777776566899999999999999999999999
Q ss_pred hhhccc-hhhHHHHHHHHH---cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768 159 EEGAMC-EPLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233 (321)
Q Consensus 159 ~~aa~~-~~~~~a~~~l~~---~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~ 233 (321)
.+++.+ .++.+||+++.. +++++|++|+|+|+ |++|++++++|+++|+ .++++++++++.++++++|++.+++.
T Consensus 167 ~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~ 245 (393)
T cd08246 167 EEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINR 245 (393)
T ss_pred HHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence 988754 588899998743 67899999999998 9999999999999999 46677889999999999999988875
Q ss_pred CCCc--------------------ccHHHHHHHHHHHhCC-CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cc
Q 020768 234 STNL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EM 291 (321)
Q Consensus 234 ~~~~--------------------~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~ 291 (321)
.+.+ ..+.+.+.++. .+. ++|++||++|+ ..+...+++++++|+++.+|.... ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~ 322 (393)
T cd08246 246 RDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTGYNH 322 (393)
T ss_pred cccccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCCCCC
Confidence 3321 01333444432 344 79999999996 678999999999999999986543 34
Q ss_pred cccchhhhccceEEEEeehh
Q 020768 292 TVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 292 ~~~~~~~~~k~~~i~g~~~~ 311 (321)
.++...++.++.++.|+..+
T Consensus 323 ~~~~~~l~~~~~~i~g~~~~ 342 (393)
T cd08246 323 TYDNRYLWMRQKRIQGSHFA 342 (393)
T ss_pred CCcHHHHhhheeEEEecccC
Confidence 56777788899999998543
No 45
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.6e-37 Score=286.09 Aligned_cols=286 Identities=30% Similarity=0.496 Sum_probs=243.0
Q ss_pred ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.+++.+++++.|.|+| .++||+|||.++++|+.|+..+.|.+.. ..+|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence 6888888888899999999996 8999999999999999999998876432 24478999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--cEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
+||+|++.+...|++|.+|..+..+.|....+..+...+|+|++|+.++.+ .++++|++++..+++.+ ..+.+||.+
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 157 (345)
T cd08286 78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC 157 (345)
T ss_pred CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence 999999998889999999999988888876554344567999999999987 99999999999888755 466788876
Q ss_pred H-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 174 C-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 174 l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+ +...+.+|+++||+|+|++|++++|+|+++|...+++++++++|.++++++|++.++++.+ .++.+.+.++. .+
T Consensus 158 ~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~ 233 (345)
T cd08286 158 GVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELT--DG 233 (345)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHh--CC
Confidence 5 5578899999999988999999999999999546888889999999999999988887643 34555555543 35
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
.++|++|||+|....++.+++.|+++|+++.+|......++++..++.|++++.+...
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (345)
T cd08286 234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLV 291 (345)
T ss_pred CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecC
Confidence 6799999999987788999999999999999996655566777777889999988553
No 46
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.1e-38 Score=283.90 Aligned_cols=233 Identities=24% Similarity=0.387 Sum_probs=199.4
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccC------CCCCcceeEEE
Q 020768 76 VIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV 143 (321)
Q Consensus 76 ~~G~e~vG~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~G~~~~~~~ 143 (321)
++|||++|+|+++|++|+ +|++||||++.+..+|++|.+|+.+++++|++...++.. ..+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 899999999999899999999999999999987665432 25799999999
Q ss_pred ecCC-cEEECCCCCChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHH
Q 020768 144 HPAD-LCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 221 (321)
Q Consensus 144 v~~~-~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~ 221 (321)
+++. +++++|+++++++++.+. ...+++++++.....+|++|||+|+|++|++++|+|+++|+++|++++.+++|.++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 9997 799999999999888665 56788999887777799999999999999999999999999768888889999999
Q ss_pred HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC--CCccccchhhh
Q 020768 222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--LEMTVPLTPAA 299 (321)
Q Consensus 222 ~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~ 299 (321)
++++|++.+++... ..+.+.++ +.+.++|++||++|.+..++.++++++++|+++.+|... .+.+++...++
T Consensus 161 a~~~Ga~~~i~~~~----~~~~~~~~--~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~ 234 (280)
T TIGR03366 161 ALSFGATALAEPEV----LAERQGGL--QNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV 234 (280)
T ss_pred HHHcCCcEecCchh----hHHHHHHH--hCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence 99999998876432 22333333 235689999999998888999999999999999999653 34577888899
Q ss_pred ccceEEEEeehhHHH
Q 020768 300 ARYLIYSFLFHFFLI 314 (321)
Q Consensus 300 ~k~~~i~g~~~~~~~ 314 (321)
+|++++.|+..++..
T Consensus 235 ~~~~~i~g~~~~~~~ 249 (280)
T TIGR03366 235 RRWLTIRGVHNYEPR 249 (280)
T ss_pred hCCcEEEecCCCCHH
Confidence 999999998875543
No 47
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.5e-37 Score=283.81 Aligned_cols=284 Identities=29% Similarity=0.492 Sum_probs=239.2
Q ss_pred ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.+++.+++++.|.|.| +++||+||+.++++|++|+..+.|... ...|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence 7899998888999999999996 999999999999999999988876542 23478999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--cEEECCCCCChhhhcc------chhhH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAM------CEPLS 168 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~------~~~~~ 168 (321)
+||+|+..+..+|+.|.+|..+..++|.+..+++ ...+|+|++|+.++.+ .++++|+++++..+.. ...+.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 9999998667789999999999999999766544 3578999999999974 9999999998732221 13577
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768 169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (321)
Q Consensus 169 ~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 248 (321)
+++++++.+.+++|++++|+|+|++|++++|+|+++|++.++++++++++.++++++|++.++++.. .++.+.+.++.
T Consensus 156 ~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~~ 233 (345)
T cd08287 156 TGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVRELT 233 (345)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHhc
Confidence 8888887788999999999888999999999999999977888988888999999999998887643 34555555442
Q ss_pred HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
.+.++|+++|++|++..+..++++++++|+++.+|.......++....+.+++++.+...
T Consensus 234 --~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (345)
T cd08287 234 --GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPA 293 (345)
T ss_pred --CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecC
Confidence 356799999999987889999999999999999996654455666566789999998654
No 48
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=3.6e-37 Score=280.70 Aligned_cols=269 Identities=27% Similarity=0.416 Sum_probs=234.3
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
|||+++.+++.++++++|.|.++++||+|||.++++|++|+....|.+ ..|.++|||++|+|+++|++ +++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCC
Confidence 689999888899999999999999999999999999999999887643 25789999999999999988 679
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~ 177 (321)
||+|...+...|++|.+|..+.+.+|......+....+|+|++|+.++.++++++|++++..+++.+.++++++.+++..
T Consensus 72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~ 151 (319)
T cd08242 72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQV 151 (319)
T ss_pred CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhc
Confidence 99999998889999999999999999876655432457999999999999999999999998888655666777777788
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
+++++++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++... ..+.++|+
T Consensus 152 ~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d~ 217 (319)
T cd08242 152 PITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFDV 217 (319)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCCE
Confidence 999999999998899999999999999995 8888888999999999999887764321 13567999
Q ss_pred EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~ 309 (321)
++||+|+...++.++++++++|+++..+.......+++..++.|+++++|..
T Consensus 218 vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~ 269 (319)
T cd08242 218 VVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSR 269 (319)
T ss_pred EEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEe
Confidence 9999998778899999999999999988665556777777889999999974
No 49
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.4e-37 Score=288.01 Aligned_cols=288 Identities=29% Similarity=0.471 Sum_probs=236.6
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccC----CcCCCCCcccccceeEEEEEeCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA----DFVVKEPMVIGHECAGVIEKVGSEVK 93 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~----~~~~~~p~~~G~e~vG~V~~vG~~v~ 93 (321)
+...++.. ..++++++|.|.++++||+|||.++++|++|+..+.+...+ +....+|.++|||++|+|+++|++++
T Consensus 29 ~~~~~~~~-~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~ 107 (384)
T cd08265 29 LGSKVWRY-PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVK 107 (384)
T ss_pred ceeEEEeC-CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCC
Confidence 34445544 47999999999999999999999999999999887632111 11134578999999999999999999
Q ss_pred CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCC-------CChhhhccchh
Q 020768 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN-------VSLEEGAMCEP 166 (321)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~-------~~~~~aa~~~~ 166 (321)
.|++||+|++.+..+|+.|++|..+++++|..+...+. ..+|+|++|+.+++..++++|++ +++..|++..+
T Consensus 108 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~ 186 (384)
T cd08265 108 NFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEP 186 (384)
T ss_pred CCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhH
Confidence 99999999999999999999999999999998775543 34799999999999999999986 45666666678
Q ss_pred hHHHHHHHH-H-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC-cccHHHH
Q 020768 167 LSVGLHACR-R-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEE 243 (321)
Q Consensus 167 ~~~a~~~l~-~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~~ 243 (321)
++++|+++. . ..+++|++|+|+|+|++|++++|+|+++|++.+++++++++|.++++++|++.++++.+. ..++.+.
T Consensus 187 ~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 266 (384)
T cd08265 187 TSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEK 266 (384)
T ss_pred HHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHH
Confidence 889999983 4 689999999999889999999999999999778999889999999999999888875532 2255555
Q ss_pred HHHHHHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768 244 VEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 244 ~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~ 309 (321)
+.++. .+.++|+++|++|++ ..+..++++|+++|+++.+|......++++..+..+..++.|+.
T Consensus 267 v~~~~--~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~ 331 (384)
T cd08265 267 VMEVT--KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQ 331 (384)
T ss_pred HHHhc--CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEee
Confidence 65543 356899999999973 47789999999999999999665445555566777888888763
No 50
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=5.3e-37 Score=282.42 Aligned_cols=283 Identities=31% Similarity=0.517 Sum_probs=237.3
Q ss_pred ceeEEEccCCCeEEEEecCCCCC-CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~-~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.++..++++++|.|+|. ++||+|||.++++|+.|+....+.+. ..+|.++|+|++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccC
Confidence 68888888889999999999985 99999999999999999988876542 34478999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccc---cCCCCCcceeEEEecCC--cEEECCCCCChhhhccc-hhhHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---TPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC-EPLSVG 170 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~-~~~~~a 170 (321)
+||+|++.+..+|++|.+|..++...|++...++ ....+|+|++|+.++++ .++++|+++++.+++.+ .++.+|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta 156 (344)
T cd08284 77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG 156 (344)
T ss_pred CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence 9999999988899999999999999998765542 22347999999999965 99999999999888754 588899
Q ss_pred HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
|++++...+.+|++|||+|+|.+|++++|+|+.+|+.+++++++++++.++++++|+. .++.+ ..++.+.+.++.
T Consensus 157 ~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~--~~~~~~~l~~~~-- 231 (344)
T cd08284 157 YFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFE--DAEPVERVREAT-- 231 (344)
T ss_pred HhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecC--CcCHHHHHHHHh--
Confidence 9998778889999999998899999999999999975688888888999999999975 34432 245555555543
Q ss_pred hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~ 309 (321)
.+.++|++||++|++..+...+++++++|+++.+|.... ....+....+.+++++.+..
T Consensus 232 ~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (344)
T cd08284 232 EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR 291 (344)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEec
Confidence 356899999999987788999999999999999997653 33455555677889988753
No 51
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=8.8e-38 Score=265.92 Aligned_cols=275 Identities=21% Similarity=0.245 Sum_probs=228.9
Q ss_pred cccccchhhceeEEEcc---C-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEE
Q 020768 9 GEKEDGEEVNMAAWLLG---V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84 (321)
Q Consensus 9 ~~~~~~~~~~~a~~~~~---~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~ 84 (321)
.+...++...|++++.. | ..+++++.+.|++..++|+||.+|+.|||+|+..++|.++.. +++|.+-|.|++|+
T Consensus 11 ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr--P~~PAVgGnEGv~e 88 (354)
T KOG0025|consen 11 SSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR--PELPAVGGNEGVGE 88 (354)
T ss_pred ccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC--CCCCcccCCcceEE
Confidence 45556777788888873 2 568999999999988899999999999999999999987644 67899999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc
Q 020768 85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC 164 (321)
Q Consensus 85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~ 164 (321)
|+.+|+++++|++||+|+... ...|+|++|.+.+++.++++++.++++.||++
T Consensus 89 Vv~vGs~vkgfk~Gd~VIp~~---------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~ 141 (354)
T KOG0025|consen 89 VVAVGSNVKGFKPGDWVIPLS---------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATL 141 (354)
T ss_pred EEEecCCcCccCCCCeEeecC---------------------------CCCccceeeEeecccceEEcCCcCChhhhhee
Confidence 999999999999999999863 35699999999999999999999999999977
Q ss_pred h-hhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh---HHHHHHHcCCCeEEecCCCcc
Q 020768 165 E-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 165 ~-~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~---~~~~~~~~g~~~vi~~~~~~~ 238 (321)
. .-+|||..++ ...+.+||+|+-.|+ +++|++.+|+|+++|++.+-++..+++ -.+.++.+|+++++..++...
T Consensus 142 ~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 142 SVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred ccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 6 6678999985 488999999999999 999999999999999987777765543 344567899999986432211
Q ss_pred cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc-CCCCCccccchhhhccceEEEEeehhHHHhhc
Q 020768 239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHLEMTVPLTPAAARYLIYSFLFHFFLIVLG 317 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~ 317 (321)
...... ......+.+.|||+|+ .....+.+.|.+||+++.+| |+..+.+++...+++|+++++|+++-.|.--+
T Consensus 222 ---~~~~k~-~~~~~~prLalNcVGG-ksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~ 296 (354)
T KOG0025|consen 222 ---RKMKKF-KGDNPRPRLALNCVGG-KSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEH 296 (354)
T ss_pred ---hhhhhh-hccCCCceEEEeccCc-hhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhcc
Confidence 111111 1124568999999998 56678899999999999998 56678999999999999999999998776433
No 52
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=5.2e-37 Score=282.68 Aligned_cols=285 Identities=34% Similarity=0.553 Sum_probs=238.1
Q ss_pred ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.+++.+++.++|.|.| .++||+|||.++++|+.|+..+.+.+.. .++|.++|+|++|+|+++|+++++++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccC
Confidence 6888988888899999999999 9999999999999999999988776533 45588999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCC--cEEECCCCCChhhhccch-hhHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGL 171 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~~-~~~~a~ 171 (321)
+||+|+..+..+|+.|.+|..+...+|.+.... .+...+|+|++|+.++++ +++++|+++++.+++.++ ++.+||
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~ 157 (347)
T cd05278 78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGF 157 (347)
T ss_pred CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhee
Confidence 999999999999999999999999999875432 122357999999999987 999999999999988664 788899
Q ss_pred HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+++...++++|++|||.|+|++|++++|+|+.+|...++++++++++.++++++|++.++++++ .++.+.++.+. .
T Consensus 158 ~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~--~ 233 (347)
T cd05278 158 HGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT--G 233 (347)
T ss_pred ehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--C
Confidence 9887788999999999887999999999999999756888888899999999999988887543 34555555442 3
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccch-hhhccceEEEEee
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT-PAAARYLIYSFLF 309 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~k~~~i~g~~ 309 (321)
+.++|++||++|+...+...+++|+++|+++.+|........... ..+.+++++.+..
T Consensus 234 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
T cd05278 234 GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGL 292 (347)
T ss_pred CCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeec
Confidence 467999999999866889999999999999999965443222122 2346888888764
No 53
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=6.9e-37 Score=281.18 Aligned_cols=282 Identities=39% Similarity=0.649 Sum_probs=232.7
Q ss_pred EEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 020768 22 WLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101 (321)
Q Consensus 22 ~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V 101 (321)
++++.+.+++++.|.|.++++||+|||.++++|++|+..............+|.++|+|++|+|+++|++++.|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V 81 (339)
T cd08232 2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV 81 (339)
T ss_pred eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence 57788899999999999999999999999999999988764221111113457899999999999999999999999999
Q ss_pred EEcCCccCCCCccccCCCCCCCCCcccccc----CCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~ 177 (321)
+..+..+|++|.+|..+..++|.++.+.+. ...+|+|++|+.++.+.++++|+++++.+|+.+.+++++|+++...
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~ 161 (339)
T cd08232 82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRA 161 (339)
T ss_pred EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhc
Confidence 999988999999999999999998654432 1247999999999999999999999999988766888899988664
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
...++++|||.|+|++|++++|+|+++|...++++++++++.++++++|++.+++++.. + +.++.. ...++|+
T Consensus 162 ~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~--~----~~~~~~-~~~~vd~ 234 (339)
T cd08232 162 GDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARD--P----LAAYAA-DKGDFDV 234 (339)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCch--h----hhhhhc-cCCCccE
Confidence 44499999998889999999999999998668888888888899999999888875432 2 222211 2356999
Q ss_pred EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
++|+.|+...++..+++|+++|+++.+|........++..++.+++++.+...
T Consensus 235 vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (339)
T cd08232 235 VFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFR 287 (339)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEec
Confidence 99999976788999999999999999986543344555666779999988763
No 54
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=7.6e-37 Score=277.25 Aligned_cols=289 Identities=37% Similarity=0.595 Sum_probs=242.0
Q ss_pred ceeEEEccC--CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 18 ~~a~~~~~~--~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
||+++..++ ..+++++++.|.+.++||+|||.++++|+.|+....+.+.. ...|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~ 77 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP---VETPVVLGHEFSGTIVEVGPDVEGW 77 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc---CCCCeeeccceEEEEEEECCCcCcC
Confidence 577887743 46999999999999999999999999999999888765311 3457899999999999999999999
Q ss_pred CCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHH
Q 020768 96 VPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC 174 (321)
Q Consensus 96 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l 174 (321)
++||+|+..+. .+|++|++|..+..+.|++...++ ....|+|++|+.++.+.++++|+++++.+++...++.++|+++
T Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l 156 (306)
T cd08258 78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAV 156 (306)
T ss_pred CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHH
Confidence 99999999874 689999999999999998765443 3457999999999999999999999999888666888899887
Q ss_pred -HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEE--eCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 175 -RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV--DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 175 -~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v--~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
..+.++++++|||.|+|++|++++|+|+++|++ ++++ ++++++.++++++|++.+ ++. ..++.+.+..+. .
T Consensus 157 ~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~~~l~~~~--~ 230 (306)
T cd08258 157 AERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NGG--EEDLAELVNEIT--D 230 (306)
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CCC--cCCHHHHHHHHc--C
Confidence 457889999999987799999999999999995 6555 345667888899999876 543 356666665543 3
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEeehhHHHhh
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFHFFLIVL 316 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~~ 316 (321)
+.++|++||++|+...+...++.|+++|+++.+|... .+..+++..+++|+++|+|+++++...+
T Consensus 231 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 296 (306)
T cd08258 231 GDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASW 296 (306)
T ss_pred CCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhH
Confidence 5679999999987788899999999999999999765 3467788888899999999999876654
No 55
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.6e-36 Score=279.05 Aligned_cols=285 Identities=36% Similarity=0.614 Sum_probs=243.9
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
||++++.+++.+.+++.+.|.+.+++|+|||.++++|+.|+..+.+... ....|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCC
Confidence 6889998888899999999999999999999999999999998876542 1344779999999999999999999999
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc-----EEECCCCCChhhhccchhhHHHHH
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CFKLPDNVSLEEGAMCEPLSVGLH 172 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~-----~~~ip~~~~~~~aa~~~~~~~a~~ 172 (321)
||+|+..+...|++|++|..++.++|....+.+. ...|+|++|+.+++++ ++++|+++++.+|+.+.++.+|++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~ 156 (343)
T cd08235 78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCIN 156 (343)
T ss_pred CCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHH
Confidence 9999999999999999999999999988765543 4679999999999998 999999999999887678888999
Q ss_pred HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+++..++++|++|+|+|+|++|++++|+|+..|.+.++++++++++.++++++|++.++++++ .++.+.++++. .+
T Consensus 157 ~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~ 232 (343)
T cd08235 157 AQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELT--DG 232 (343)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc--cCHHHHHHHHh--CC
Confidence 987778999999999988999999999999999965888888999999989999988877543 45666555542 35
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeeh
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~ 310 (321)
.++|++|||+++...+...+++++++|+++.+|.... ...++...+..+++++.++..
T Consensus 233 ~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 233 RGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 6799999999987788999999999999999986543 245555667789999988753
No 56
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.4e-36 Score=279.00 Aligned_cols=282 Identities=27% Similarity=0.408 Sum_probs=236.2
Q ss_pred ceeEEEccCCCeE-EEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNTLK-IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~l~-~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.+++... ++++|.|.++++||+|||.++++|++|+..+.+..+ ...|.++|||++|+|+++|++++.|+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence 7899998766655 899999999999999999999999999988876532 22367899999999999999999999
Q ss_pred CCCEEEEcC-CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768 97 PGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (321)
Q Consensus 97 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l 174 (321)
+||+|++.+ ..+|+.|.+|..+..++|.+....+ ...+|+|++|+.++.++++++|+++++.+++.+. .+.++|+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~ 155 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAG-YTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI 155 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCccccC-ccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence 999999865 4589999999999999998776443 2457999999999999999999999999888664 668889998
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
+.+.+++|++|||+|+|++|++++|+|+. .|. .++++++++++.++++++|++.+++... ..++.+.+++. .+
T Consensus 156 ~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~---~~- 229 (338)
T PRK09422 156 KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEK---TG- 229 (338)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHh---cC-
Confidence 77899999999999999999999999998 498 6888899999999999999988877532 13444444443 23
Q ss_pred CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
++|+++++.++...+..++++++++|+++.+|.......++...++.+++++.|++.
T Consensus 230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (338)
T PRK09422 230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLV 286 (338)
T ss_pred CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecC
Confidence 689666556667899999999999999999997655556677778889999999763
No 57
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.3e-36 Score=277.90 Aligned_cols=279 Identities=30% Similarity=0.467 Sum_probs=226.4
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhcccc--------CCcCCCCCcccccceeEEEEEeC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--------ADFVVKEPMVIGHECAGVIEKVG 89 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~--------~~~~~~~p~~~G~e~vG~V~~vG 89 (321)
||++++.++ .+++++++.|+++++||+|||.++++|+.|++...|... ......+|.++|+|++|+|+++|
T Consensus 1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08262 1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG 79 (341)
T ss_pred CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence 688888766 899999999999999999999999999999998877321 01113357899999999999999
Q ss_pred CCCCC-CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhH
Q 020768 90 SEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS 168 (321)
Q Consensus 90 ~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~ 168 (321)
++++. |++||+|+..+..+|++|..|..+.. ....|+|++|+.++.+.++++|+++++.++++..+++
T Consensus 80 ~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~ 148 (341)
T cd08262 80 PGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA 148 (341)
T ss_pred CCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHH
Confidence 99987 99999999999999999999943321 1246999999999999999999999999888666888
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcc--cHHHHHHH
Q 020768 169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ--DIAEEVEK 246 (321)
Q Consensus 169 ~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~--~~~~~~~~ 246 (321)
++|++++.+++++|++|||+|+|++|.+++|+|+.+|++.++++++++++.++++++|++.+++++.... ++. .+..
T Consensus 149 ~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~ 227 (341)
T cd08262 149 VGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELA 227 (341)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHH
Confidence 8998887789999999999988999999999999999977888888999999999999988887543211 111 1222
Q ss_pred HHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
. ..+.++|++||++|+...+..++++++++|+++.+|.......+.......+++++.++..+
T Consensus 228 ~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd08262 228 R--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGY 290 (341)
T ss_pred H--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecc
Confidence 2 23567999999999855788899999999999999966433333333335688888876543
No 58
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=4.8e-36 Score=275.42 Aligned_cols=281 Identities=37% Similarity=0.611 Sum_probs=238.7
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
|||++++.++.+++.++|.|.++++|++|||.++++|+.|+....+.... ..+|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCC
Confidence 68888888888999999999999999999999999999999988765422 244788999999999999999999999
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~ 177 (321)
||+|+..+..+|+.|..|+.+..++|......+ ....|+|++|+.++++ ++++|++++++++++++++.+++++++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~ 155 (337)
T cd08261 78 GDRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRA 155 (337)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhc
Confidence 999999888899999999999999995433222 1246999999999999 99999999999988777778888888778
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+.+|++|||+|+|.+|++++|+|+.+|. .++++.+++++.++++++|+++++++.. .++.+.+.++. .+.++|+
T Consensus 156 ~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~~~vd~ 230 (337)
T cd08261 156 GVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DGEGADV 230 (337)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CCCCCCE
Confidence 89999999999889999999999999999 5788888899999999999999887654 35666665542 3567999
Q ss_pred EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEe
Q 020768 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFL 308 (321)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~ 308 (321)
+||++|+...+..++++|+++|+++.+|.......++...+..+++++.+.
T Consensus 231 vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (337)
T cd08261 231 VIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGS 281 (337)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEe
Confidence 999998877889999999999999999866544455655677788888775
No 59
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.9e-36 Score=284.35 Aligned_cols=292 Identities=22% Similarity=0.239 Sum_probs=237.8
Q ss_pred chhhceeEEEcc-----C-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCC------c-CCCCC-ccccc
Q 020768 14 GEEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD------F-VVKEP-MVIGH 79 (321)
Q Consensus 14 ~~~~~~a~~~~~-----~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~------~-~~~~p-~~~G~ 79 (321)
++.+|||.++.. + +.+++.++|.|.|+++|++||+.++++|+.|+....+..... . ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 467799999942 2 469999999999999999999999999999987665432100 0 01223 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChh
Q 020768 80 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159 (321)
Q Consensus 80 e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~ 159 (321)
|++|+|+++|++++.|++||+|++.+...|++|++|+.+++++|.....++....+|+|+||+.+++.+++++|+++++.
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 99999999999999999999999999999999999999999999876655544568999999999999999999999999
Q ss_pred hhccch-hhHHHHHHHH---HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768 160 EGAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (321)
Q Consensus 160 ~aa~~~-~~~~a~~~l~---~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~ 234 (321)
+++.+. +..++|+++. .+.+++|++++|+|+ |++|++++|+|+++|+ .+++++.++++.++++++|++.+++.+
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~ 242 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRN 242 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCC
Confidence 887554 7788898874 367899999999998 9999999999999999 467777888999999999999998864
Q ss_pred CCc--------------------ccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccc
Q 020768 235 TNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTV 293 (321)
Q Consensus 235 ~~~--------------------~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~ 293 (321)
..+ ..+.+.+.++ ..++++|++|||+|. ..+...+++++++|+++.+|.... ...+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 319 (398)
T TIGR01751 243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTGYNHDY 319 (398)
T ss_pred CcchhhccccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence 321 0122233332 235679999999996 678999999999999999997644 2466
Q ss_pred cchhhhccceEEEEee
Q 020768 294 PLTPAAARYLIYSFLF 309 (321)
Q Consensus 294 ~~~~~~~k~~~i~g~~ 309 (321)
+...++.++.++.|+.
T Consensus 320 ~~~~~~~~~~~~~~~~ 335 (398)
T TIGR01751 320 DNRYLWMRQKRIQGSH 335 (398)
T ss_pred CHHHHhhcccEEEccc
Confidence 6677788899999886
No 60
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=4.9e-36 Score=275.96 Aligned_cols=283 Identities=39% Similarity=0.647 Sum_probs=240.4
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
|||+++.+.+.+.+++.+.|+++++||+||+.++++|+.|+..+.+... ...|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~----~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA----YHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC----CCCCcccCcceEEEEEEECCCCCcCCC
Confidence 7899998878899999999999999999999999999999988776431 345789999999999999999999999
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~ 177 (321)
||+|+..+...|++|.+|..++.+.|+.....+. ...|+|++|+.+++++++++|+++++.+++.++++.++|+++...
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~ 155 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA 155 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence 9999999888999999999999999987655443 367999999999999999999999999988777788999998878
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.++++++|+|+|+|.+|++++|+|+.+|.+.++++++++++.++++++|++.+++.+. .. .+.+.... .+.++|+
T Consensus 156 ~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d~ 230 (343)
T cd08236 156 GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGADL 230 (343)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCCE
Confidence 8999999999988999999999999999965888888888999999999988887543 22 44444432 3567999
Q ss_pred EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcc---ccchhhhccceEEEEeeh
Q 020768 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT---VPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~k~~~i~g~~~ 310 (321)
+|||+|+...+..++++|+++|+++.+|....... .++..++.+++++.|+..
T Consensus 231 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (343)
T cd08236 231 VIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWN 286 (343)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEee
Confidence 99999887788999999999999999996644322 233445678999988764
No 61
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=3e-36 Score=278.19 Aligned_cols=289 Identities=30% Similarity=0.414 Sum_probs=240.2
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccC---------CcCCCCCcccccceeEEEEE
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---------DFVVKEPMVIGHECAGVIEK 87 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~---------~~~~~~p~~~G~e~vG~V~~ 87 (321)
|||+++..+ ..++++++|.|+++++||+|||.++++|++|+..+.+.... .....+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 788888754 45899999999999999999999999999999988764310 00124567899999999999
Q ss_pred eCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hh
Q 020768 88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EP 166 (321)
Q Consensus 88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~ 166 (321)
+|++++.+++||+|+..+...|++|..|..+..++|.+..+.+. ...|++++|+.++.+.++++|+++++.+++.+ ..
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~ 159 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence 99999999999999999999999999999999999988765543 36799999999999999999999999998855 47
Q ss_pred hHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHH
Q 020768 167 LSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245 (321)
Q Consensus 167 ~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 245 (321)
+.+||++++. ..++++++|+|+|+|++|++++|+|+++|++.|+++++++++.+.++++|++.+++.++ .++.+.+.
T Consensus 160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~ 237 (350)
T cd08240 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSD--PDAAKRII 237 (350)
T ss_pred hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCC--ccHHHHHH
Confidence 7889999865 45568999999988999999999999999977888889999999999999987776432 34444444
Q ss_pred HHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhH
Q 020768 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFF 312 (321)
Q Consensus 246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~ 312 (321)
+.. ++++|++||++|.......++++|+++|+++.+|.......++...+.++++++.++....
T Consensus 238 ~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~ 301 (350)
T cd08240 238 KAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGS 301 (350)
T ss_pred HHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCC
Confidence 432 2389999999997778999999999999999999765544555556667999999976543
No 62
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.3e-35 Score=273.15 Aligned_cols=285 Identities=31% Similarity=0.524 Sum_probs=234.4
Q ss_pred ceeEEEccCC-CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~-~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++..++ .+++.+.|.|.|+++|++|||.++++|+.|+..+.+..........|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6888887554 699999999999999999999999999999887544211111134577899999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~ 176 (321)
+||+|+..+..+|+.|+.|..+++++|+..++.+. ...|+|++|++++++.++++|++++.+.+++..++.++++++.
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~- 158 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL- 158 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-
Confidence 99999999888999999999999999987665553 4579999999999999999999999876766678888888765
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
...++|++|||+|+|++|++++|+|+++|.+++++++++++|.++++++|++.+++... .++. .+.++. .++++|
T Consensus 159 ~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~-~~~~~~--~~~~vd 233 (341)
T cd05281 159 AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE--EDVV-EVKSVT--DGTGVD 233 (341)
T ss_pred hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc--ccHH-HHHHHc--CCCCCC
Confidence 45578999999888999999999999999866788888899999999999988776432 3444 454442 356899
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccch-hhhccceEEEEee
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLT-PAAARYLIYSFLF 309 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~k~~~i~g~~ 309 (321)
++|||+|+...+..++++|+++|+++.+|.......+++. .+..+++++.++.
T Consensus 234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (341)
T cd05281 234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGIT 287 (341)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEe
Confidence 9999999877889999999999999999866544444443 3677888888765
No 63
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.2e-35 Score=275.64 Aligned_cols=284 Identities=34% Similarity=0.504 Sum_probs=237.7
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
|||+++..+ ..++++++|.|.++++||+|||.++++|+.|+..+.+... ..+|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK 76 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence 789999865 6789999999999999999999999999999998876542 34578999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCcccc---------------cc----CCCCCcceeEEEecCCcEEECCCCCC
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHGSLANQVVHPADLCFKLPDNVS 157 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~G~~~~~~~v~~~~~~~ip~~~~ 157 (321)
+||+|+..+..+|++|.+|..+..++|.+...+ +. ....|+|++|+.++++.++++|++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 999999999999999999999999999754210 00 02358999999999999999999999
Q ss_pred hhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC
Q 020768 158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235 (321)
Q Consensus 158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~ 235 (321)
+.+++.+. .+.++|.++ +...++++++|||+|+|++|++++++|+.+|+++++++++++++.++++++|++.+++.+.
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~ 236 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE 236 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC
Confidence 99988665 567888776 5588999999999977999999999999999966888889999999999999988876543
Q ss_pred CcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEee
Q 020768 236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~ 309 (321)
.++...+.++. .+.++|++||++++...+..++++++++|+++.+|.... ...++...+..++.++.+++
T Consensus 237 --~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (363)
T cd08279 237 --DDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSL 308 (363)
T ss_pred --ccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEE
Confidence 35555555442 256799999999977788999999999999999986542 44566666777888877763
No 64
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=8.8e-36 Score=273.82 Aligned_cols=282 Identities=26% Similarity=0.378 Sum_probs=235.7
Q ss_pred eeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 19 MAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 19 ~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
|+.+.+. ...+++++++.|.|+++|++|||.++++|++|++.+.+.... ..+|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~V~~vG~~v~~~~~ 77 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP---TKYPLVPGHEIVGIVVAVGSKVTKFKV 77 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC---CCCCcccCcceeeEEEEECCCCcccCC
Confidence 3455554 368999999999999999999999999999999988875421 356889999999999999999999999
Q ss_pred CCEEEEcC-CccCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHH
Q 020768 98 GDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV 169 (321)
Q Consensus 98 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~ 169 (321)
||+|++.+ ...|++|.+|..+..++|+.+.+.+ +...+|+|+||+.++.+.++++|+++++.+++.+. ...+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 157 (337)
T cd05283 78 GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT 157 (337)
T ss_pred CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHH
Confidence 99998543 4489999999999999998876542 22357999999999999999999999999887554 6678
Q ss_pred HHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 170 a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
||++++...+++|++++|.|+|++|++++++|+.+|+ .++++++++++.++++++|++.+++... .++. +.
T Consensus 158 a~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~~--- 228 (337)
T cd05283 158 VYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---KK--- 228 (337)
T ss_pred HHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---hh---
Confidence 8988877778999999998889999999999999999 6888889899999999999988876432 1211 11
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhHH
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
.+.++|+++||+|+...+..++++++++|+++.+|......++++..++.+++++.|+.....
T Consensus 229 -~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 291 (337)
T cd05283 229 -AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGR 291 (337)
T ss_pred -ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCH
Confidence 256799999999986568899999999999999997655556777777889999999876443
No 65
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=7.6e-36 Score=272.76 Aligned_cols=260 Identities=22% Similarity=0.273 Sum_probs=212.3
Q ss_pred ceeEEEccCC------CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768 18 NMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91 (321)
Q Consensus 18 ~~a~~~~~~~------~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~ 91 (321)
||++++.+++ .++++++|.|.|+++||+|||.++++|++|+..+.|.+... ..+|.++|||++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~--~~~p~v~G~e~~G~V~~vG~~ 78 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGST--KALPVPPGFEGSGTVVAAGGG 78 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC--CCCCcCCCcceEEEEEEECCC
Confidence 6888887543 58888999999999999999999999999999888754321 346889999999999999999
Q ss_pred CCC-CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHH
Q 020768 92 VKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSV 169 (321)
Q Consensus 92 v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~ 169 (321)
+++ |++||+|+..+. .+|+|+||+.++++.++++|+++++.+++.+ ....+
T Consensus 79 v~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~t 131 (324)
T cd08291 79 PLAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLT 131 (324)
T ss_pred ccccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHH
Confidence 996 999999987521 1499999999999999999999999988743 35556
Q ss_pred HHHHHHHcCCCCCCEEEEE-cC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768 170 GLHACRRANIGPETNVLIM-GA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 170 a~~~l~~~~~~~g~~vlI~-Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~ 247 (321)
+|..++.... ++++++|+ |+ |++|++++|+|+++|+ .+++++++++|.++++++|++++++++. .++.+.++++
T Consensus 132 a~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~~ 207 (324)
T cd08291 132 ALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKEL 207 (324)
T ss_pred HHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHHH
Confidence 7755555554 56666665 55 9999999999999999 6888889999999999999999988653 4666666655
Q ss_pred HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-c-cccchhhhccceEEEEeehhHH
Q 020768 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-M-TVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
. .+.++|++||++|+. .....+++++++|+++.+|..... . .++...++.|++++.|+....+
T Consensus 208 ~--~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (324)
T cd08291 208 I--AKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTW 272 (324)
T ss_pred h--CCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHh
Confidence 3 356899999999974 567789999999999999965432 2 3666778889999999987654
No 66
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.8e-35 Score=275.53 Aligned_cols=283 Identities=29% Similarity=0.486 Sum_probs=232.0
Q ss_pred ceeEEEccCCCeEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.+++.++++++|.|.+ +++|++|||.++++|+.|++.+.|... ..+|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCC
Confidence 6788888888999999999996 899999999999999999998887543 34588999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccc---------cccCCCCCcceeEEEecCC--cEEECCCCCChhh---hc
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHPAD--LCFKLPDNVSLEE---GA 162 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~---aa 162 (321)
+||+|+..+..+|+.|..|..++.++|.+... .+....+|+|++|+.++.+ .++++|+++++.+ ++
T Consensus 77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a 156 (375)
T cd08282 77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYL 156 (375)
T ss_pred CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhee
Confidence 99999999999999999999999999975321 1112346999999999976 8999999999984 34
Q ss_pred -cchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHH
Q 020768 163 -MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241 (321)
Q Consensus 163 -~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 241 (321)
+..+++++|+++..+.+++|++|+|+|+|++|++++|+|+++|+..+++++++++|.++++++|+. .+++. ..++.
T Consensus 157 ~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~--~~~~~ 233 (375)
T cd08282 157 MLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFS--DGDPV 233 (375)
T ss_pred eecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccC--cccHH
Confidence 445788999999778899999999988899999999999999986688899999999999999984 44433 24555
Q ss_pred HHHHHHHHHhCCCccEEEEcCCCHH-----------HHHHHHHHcccCCEEEEEcCCCC-------------Cccccchh
Q 020768 242 EEVEKIQKAMGTGIDVSFDCAGFNK-----------TMSTALSATRAGGKVCLVGMGHL-------------EMTVPLTP 297 (321)
Q Consensus 242 ~~~~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~-------------~~~~~~~~ 297 (321)
+.+.++. ++++|+++||+|... .+..++++++++|+++.+|.... ...+++..
T Consensus 234 ~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (375)
T cd08282 234 EQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGL 310 (375)
T ss_pred HHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHH
Confidence 5555442 357999999999752 58899999999999998885431 12356666
Q ss_pred hhccceEEEEeeh
Q 020768 298 AAARYLIYSFLFH 310 (321)
Q Consensus 298 ~~~k~~~i~g~~~ 310 (321)
++.++.++.+...
T Consensus 311 ~~~~~~~~~~~~~ 323 (375)
T cd08282 311 LWAKGLSFGTGQA 323 (375)
T ss_pred HHhcCcEEEEecC
Confidence 7788888766644
No 67
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.1e-35 Score=272.00 Aligned_cols=284 Identities=32% Similarity=0.461 Sum_probs=238.7
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++..+ ..+++++.|.|.+.++||+||+.++++|+.|+..+.|.... ..+|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~ 77 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWR 77 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCC
Confidence 788888754 45899999999999999999999999999999988875431 34588999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--cEEECCCCCChhhhccch-hhHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
+||+|+..+...|++|.+|..++.++|.+....+ ...+|+|++|+.++.. .++++|+++++.+++.+. +..+||++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~ 156 (345)
T cd08260 78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPG-FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRA 156 (345)
T ss_pred CCCEEEECCCCCCCCCccccCcCcccCCCCcccc-cCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHH
Confidence 9999998666789999999999999999864332 2347999999999974 999999999998887654 77889998
Q ss_pred H-HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 174 C-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 174 l-~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+ +..++.++++++|+|+|++|++++|+|+++|. .++++.+++++.++++++|++.+++.+. ..++.+.+..+. +
T Consensus 157 l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~---~ 231 (345)
T cd08260 157 LVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT---G 231 (345)
T ss_pred HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh---C
Confidence 7 45788999999999999999999999999999 6888889999999999999998887643 134555555442 2
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC---ccccchhhhccceEEEEeeh
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE---MTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~k~~~i~g~~~ 310 (321)
+++|++||++|+...+...+++++++|+++.+|..... ..+++..++.+++++.++..
T Consensus 232 ~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08260 232 GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292 (345)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence 38999999999767889999999999999999965432 35666667789999999754
No 68
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7.8e-36 Score=273.55 Aligned_cols=278 Identities=26% Similarity=0.400 Sum_probs=233.8
Q ss_pred ceeEEEccCCC-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~~~~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.+++. ++++++|.|.++++|++||+.++++|+.|+....|..+. .++|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVKGFK 77 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCccCC
Confidence 78999987765 999999999999999999999999999999887764321 35578999999999999999998999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~ 175 (321)
+||+|++.+..+|++|.+|..+.+++|+...+++. +.+|+|++|+.++.+.++++|+++++.+++.+. .+.++|++++
T Consensus 78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~ 156 (334)
T PRK13771 78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR 156 (334)
T ss_pred CCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence 99999999888999999999999999998776553 468999999999999999999999998888665 7788899887
Q ss_pred HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 176 ~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
...++++++++|+|+ |.+|++++|+|+++|+ .++++++++++.+.++++ ++.+++.. ++.+.++++ .+
T Consensus 157 ~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~-----~~ 225 (334)
T PRK13771 157 RAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI-----GG 225 (334)
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc-----CC
Confidence 668899999999998 9999999999999999 588888889999998888 66655432 333333331 36
Q ss_pred ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCc--cccchhhhccceEEEEeehh
Q 020768 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEM--TVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~k~~~i~g~~~~ 311 (321)
+|+++||+|+ .....+++.|+++|+++.+|...... ++++..++.+++++.+.+..
T Consensus 226 ~d~~ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
T PRK13771 226 ADIVIETVGT-PTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA 283 (334)
T ss_pred CcEEEEcCCh-HHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC
Confidence 9999999997 57889999999999999999654322 24455556789999987653
No 69
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.3e-35 Score=269.30 Aligned_cols=282 Identities=35% Similarity=0.572 Sum_probs=238.6
Q ss_pred ceeEEEccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
|||+++.+++.+++.+.+.|.++++||+|||.++++|+.|+....|... ..+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence 7899998888999999999999999999999999999999998887543 236789999999999999999999999
Q ss_pred CCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHc
Q 020768 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (321)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~ 177 (321)
||+|+..+...|+.|.+|..++.++|..+.+.+. ...|+|++|+.++.+.++++|+++++.+++.+.++.+++++++.+
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 155 (334)
T cd08234 77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLL 155 (334)
T ss_pred CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhc
Confidence 9999998888999999999999999988765432 257999999999999999999999999988666777888888778
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
++++|++|+|+|+|.+|.+++++|+++|+++++++++++++.++++++|++.+++++.. ++... . ...+.++|+
T Consensus 156 ~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~--~--~~~~~~vd~ 229 (334)
T cd08234 156 GIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE--DPEAQ--K--EDNPYGFDV 229 (334)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC--CHHHH--H--HhcCCCCcE
Confidence 99999999999889999999999999999658888899999999999999877765432 33222 1 223578999
Q ss_pred EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEeeh
Q 020768 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~ 310 (321)
+||++|........+++++++|+++.+|.... ...++...++.+++++.+...
T Consensus 230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
T cd08234 230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI 284 (334)
T ss_pred EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc
Confidence 99999877788999999999999999996543 233444445568888888653
No 70
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=4.3e-35 Score=269.45 Aligned_cols=285 Identities=30% Similarity=0.420 Sum_probs=241.5
Q ss_pred ceeEEEccCC--CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 18 NMAAWLLGVN--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 18 ~~a~~~~~~~--~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
|||+++.+++ .+++++++.|.+.++|++||+.++++|+.|...+.+..... ...|.++|+|++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~~~ 78 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVSGL 78 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCCCC
Confidence 7899988665 89999999999999999999999999999998887654322 3447789999999999999999999
Q ss_pred CCCCEEEEcC-CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 96 VPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 96 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
++||+|+..+ ...|+.|.+|..++..+|.+....+. ...|++++|+.++++.++++|+++++.+++.+ ....+||++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~ 157 (341)
T cd08297 79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA 157 (341)
T ss_pred CCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHH
Confidence 9999999876 45899999999999999988765543 45799999999999999999999999988754 477889999
Q ss_pred HHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 174 CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+...++++++++||+|+ +++|++++++|+++|. .++++.+++++.+.++++|++.++++.. .++.+.+.++. .+
T Consensus 158 ~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~~ 232 (341)
T cd08297 158 LKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--GG 232 (341)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--cC
Confidence 87778999999999998 7799999999999999 6888889999999999999998887643 35555555542 35
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeeh
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~ 310 (321)
.++|+++|+.+.......++++++++|+++.+|..... .+++...++.+++++.+...
T Consensus 233 ~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08297 233 GGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLV 291 (341)
T ss_pred CCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEecc
Confidence 78999999888778899999999999999999965432 35666667789999998654
No 71
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=4.3e-35 Score=272.30 Aligned_cols=284 Identities=32% Similarity=0.499 Sum_probs=238.8
Q ss_pred ceeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC--
Q 020768 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT-- 94 (321)
Q Consensus 18 ~~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~-- 94 (321)
||++++..+ ..+++++.|.|.++++||+||+.++++|++|+..+.+..+ ..+|.++|||++|+|+++|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~ 76 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPY 76 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCC
Confidence 688888765 5689999999999999999999999999999998876542 356789999999999999999988
Q ss_pred -CCCCCEEEEcCCccCCCCccccCCCCCCCCCcccccc---------------------CCCCCcceeEEEecCCcEEEC
Q 020768 95 -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLCFKL 152 (321)
Q Consensus 95 -~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~G~~~~~~~v~~~~~~~i 152 (321)
|++||+|+..+..+|+.|.+|..++.++|++..++.. ....|++++|+.++.+.++++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 9999999998888999999999999999997542110 013699999999999999999
Q ss_pred CCCCChhhhccch-hhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE
Q 020768 153 PDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI 230 (321)
Q Consensus 153 p~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v 230 (321)
|+++++.+++.+. ++.+||+++.. ..+.++++|||+|+|++|++++++|+++|+..++++++++++.++++++|++.+
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v 236 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT 236 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence 9999999988664 68889998854 677899999999879999999999999999668888889999999999999888
Q ss_pred EecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC--CccccchhhhccceEEEEe
Q 020768 231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL--EMTVPLTPAAARYLIYSFL 308 (321)
Q Consensus 231 i~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~k~~~i~g~ 308 (321)
++.+. .++.+.++++. .+.++|++||++++....+.++++++++|+++.+|.... ...++...++.+++++.++
T Consensus 237 ~~~~~--~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T cd08263 237 VNAAK--EDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGS 312 (367)
T ss_pred ecCCc--ccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence 87543 45555555442 356799999999985488899999999999999986543 3456667777899999886
Q ss_pred e
Q 020768 309 F 309 (321)
Q Consensus 309 ~ 309 (321)
.
T Consensus 313 ~ 313 (367)
T cd08263 313 Y 313 (367)
T ss_pred C
Confidence 4
No 72
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=5e-35 Score=269.09 Aligned_cols=277 Identities=32% Similarity=0.564 Sum_probs=230.5
Q ss_pred CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 020768 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (321)
Q Consensus 27 ~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~ 106 (321)
..+++++.|.|.|+++|++|||.++++|+.|+.++.+.........+|.++|+|++|+|+++|++++.|++||+|+..+.
T Consensus 9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 88 (340)
T TIGR00692 9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH 88 (340)
T ss_pred CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence 46889999999999999999999999999999876553211112345778999999999999999999999999999998
Q ss_pred ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEE
Q 020768 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL 186 (321)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vl 186 (321)
..|+.|..|..+..++|++.++++. ...|+|++|+.++++.++++|+++++.+++...++.++++++ ...+++|++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vl 166 (340)
T TIGR00692 89 IVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVL 166 (340)
T ss_pred CCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEE
Confidence 9999999999999999999766532 357999999999999999999999987777666888888776 34567999999
Q ss_pred EEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHH
Q 020768 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 266 (321)
Q Consensus 187 I~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 266 (321)
|.|+|++|++++|+|+++|.+.|+++++++++.++++++|++.++++.. .++.+.+.++. .+.++|++|||+|+..
T Consensus 167 I~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~--~~~~~d~vld~~g~~~ 242 (340)
T TIGR00692 167 VTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLT--DGEGVDVFLEMSGAPK 242 (340)
T ss_pred EECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhc--CCCCCCEEEECCCCHH
Confidence 9888999999999999999965888888899999999999988777543 45666555542 3567999999999877
Q ss_pred HHHHHHHHcccCCEEEEEcCCCCCccccch-hhhccceEEEEee
Q 020768 267 TMSTALSATRAGGKVCLVGMGHLEMTVPLT-PAAARYLIYSFLF 309 (321)
Q Consensus 267 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~k~~~i~g~~ 309 (321)
.+...+++|+++|+++.+|......+++.. .++.+++++.+..
T Consensus 243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (340)
T TIGR00692 243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGIT 286 (340)
T ss_pred HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEe
Confidence 889999999999999999976443444444 5777889888764
No 73
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3.8e-35 Score=267.97 Aligned_cols=274 Identities=29% Similarity=0.423 Sum_probs=228.8
Q ss_pred ceeEEEccC--CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 18 ~~a~~~~~~--~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
||++++.++ +.+++++.+.|+++++||+||+.++++|++|+..+.+.. ...+|.++|||++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGV 76 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCC
Confidence 688888644 478888999988999999999999999999998876321 12357799999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l 174 (321)
++||+|++.+..+|++|.+|..++.++|.+..+++. ...|+|++|+.++++.++++|+++++++++.+. .+.++|+++
T Consensus 77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l 155 (325)
T cd08264 77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL 155 (325)
T ss_pred CCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 999999999888999999999999999998765543 357999999999999999999999999888654 667899998
Q ss_pred HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
+.+++++|++++|+|+ |++|++++++|+++|.+ +++++ +.+.++++|++.+++.+. ..+.+.++ . .
T Consensus 156 ~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~~----~~~~l~~~---~-~ 222 (325)
T cd08264 156 KTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDYDE----VEEKVKEI---T-K 222 (325)
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecchH----HHHHHHHH---h-C
Confidence 7788999999999998 99999999999999994 66664 236778899988776432 23334433 2 6
Q ss_pred CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEeeh
Q 020768 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
++|+++|++|+ ..++.++++|+++|+++.+|... ....+++..++.++.++.|+..
T Consensus 223 ~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (325)
T cd08264 223 MADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTG 279 (325)
T ss_pred CCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccC
Confidence 79999999996 68899999999999999999642 2356777788889999999743
No 74
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=7.5e-35 Score=267.06 Aligned_cols=285 Identities=33% Similarity=0.544 Sum_probs=240.6
Q ss_pred ceeEEEccCC-C-eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 18 NMAAWLLGVN-T-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 18 ~~a~~~~~~~-~-l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
||++++..++ . +.+.+.|.|.+++++|+|||.++++|+.|...+.+.... ....|.++|+|++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~~~ 78 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVTNF 78 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCccC
Confidence 7888888654 3 588899999999999999999999999999988775431 13457899999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC 174 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l 174 (321)
++||+|+..+..+|+.|.+|..++.++|......+. ..+|+|++|+.++.+.++++|+++++.+++.+ .++.+||+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l 157 (338)
T cd08254 79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV 157 (338)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 999999999988999999999999999976554433 46799999999999999999999999888755 5888999988
Q ss_pred HH-cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 175 RR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 175 ~~-~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
.. ..++++++|||.|+|++|++++++|+.+|. .++++++++++.+.++++|++.+++..+ ..+.+.+ .. ..+.
T Consensus 158 ~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~-~~--~~~~ 231 (338)
T cd08254 158 VRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK-AA--GLGG 231 (338)
T ss_pred HhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH-HH--hcCC
Confidence 54 678999999998879999999999999999 5888889999999999999988776433 3344444 22 3467
Q ss_pred CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehh
Q 020768 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
++|+++||+|....++.++++|+++|+++.+|.......++...++.+++++.|++..
T Consensus 232 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (338)
T cd08254 232 GFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGG 289 (338)
T ss_pred CceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccC
Confidence 8999999999878899999999999999999976555567777788899999986543
No 75
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.7e-34 Score=263.32 Aligned_cols=259 Identities=25% Similarity=0.271 Sum_probs=215.7
Q ss_pred ceeEEEccCC----CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768 18 NMAAWLLGVN----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (321)
Q Consensus 18 ~~a~~~~~~~----~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~ 93 (321)
||++++.+++ .++++++|.|.++++||+|||.++++|+.|+..+.|..... ...|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~--~~~p~~~G~e~~G~V~~~G~~v~ 78 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYK--PELPAIGGSEAVGVVDAVGEGVK 78 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC--CCCCCCCCcceEEEEEEeCCCCC
Confidence 6888887553 38899999999999999999999999999999887754321 34578999999999999999999
Q ss_pred CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHH
Q 020768 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH 172 (321)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~ 172 (321)
.|++||+|+..+ ..|+|++|+.+++..++++|+++++.+++.+. ...++|+
T Consensus 79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 130 (324)
T cd08292 79 GLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALM 130 (324)
T ss_pred CCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHH
Confidence 999999998752 25999999999999999999999999888654 5667888
Q ss_pred HHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 173 ACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+++.+++++|++|||+|+ |.+|++++|+|+++|+ .++++..++++.+.++++|++.+++..+ .++.+.+.++. .
T Consensus 131 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~ 205 (324)
T cd08292 131 LLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ--PGWQDKVREAA--G 205 (324)
T ss_pred HHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC--chHHHHHHHHh--C
Confidence 887789999999999988 9999999999999999 5777777888888888899988877533 45666665542 3
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF 312 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~ 312 (321)
+.++|++||++|+ .....++++++++|+++.+|.... ...++...++.+++++.++....
T Consensus 206 ~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08292 206 GAPISVALDSVGG-KLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGR 266 (324)
T ss_pred CCCCcEEEECCCC-hhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHH
Confidence 6789999999998 467899999999999999996533 34556556778999999987654
No 76
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=5.3e-34 Score=260.86 Aligned_cols=274 Identities=26% Similarity=0.373 Sum_probs=230.0
Q ss_pred ceeEEEccCC-----CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCC
Q 020768 18 NMAAWLLGVN-----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (321)
Q Consensus 18 ~~a~~~~~~~-----~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v 92 (321)
||++++.+++ .+++++.+.|.++++||+||+.++++|++|+..+.|..+. ...|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v 77 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV 77 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence 6788887655 6889999998899999999999999999999988775422 3457899999999999999999
Q ss_pred CCCCCCCEEEEcCC-ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHH
Q 020768 93 KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVG 170 (321)
Q Consensus 93 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a 170 (321)
+++++||+|++.+. .+|++|.+|..+..++|+...+.+. ..+|+|++|+.++.+.++++|+++++.+++.+ .++.+|
T Consensus 78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta 156 (329)
T cd08298 78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG 156 (329)
T ss_pred CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence 99999999988653 5899999999999999998876654 35799999999999999999999999988744 578889
Q ss_pred HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
|++++.++++++++++|+|+|++|+++++++++.|. .+++++.++++.++++++|++.+++....
T Consensus 157 ~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-------------- 221 (329)
T cd08298 157 YRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL-------------- 221 (329)
T ss_pred HHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc--------------
Confidence 999977899999999999889999999999999998 68888888999999999999877764321
Q ss_pred hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehh
Q 020768 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~ 311 (321)
.+.++|+++++.+....++.++++++++|+++.+|..... ..+++.. +.++..+.++...
T Consensus 222 ~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~ 282 (329)
T cd08298 222 PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL 282 (329)
T ss_pred CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCC
Confidence 1357999999977778899999999999999999854322 2344443 4577778776643
No 77
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=9.5e-34 Score=259.01 Aligned_cols=278 Identities=33% Similarity=0.511 Sum_probs=232.1
Q ss_pred ceeEEEcc-CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCC
Q 020768 18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (321)
Q Consensus 18 ~~a~~~~~-~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~ 96 (321)
||++++.. ++.+.+++.|.|.+.++||+|||+++++|+.|+....|..+. ...|.++|||++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~ 77 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFK 77 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCC
Confidence 68888875 578999999999999999999999999999999988775432 34578999999999999999999999
Q ss_pred CCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH
Q 020768 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR 175 (321)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~ 175 (321)
+||+|++.+...|+.|.+|..+..++|.+...++ ....|+|++|+.++...++++|+++++++++.+ .++.++|++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~ 156 (332)
T cd08259 78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK 156 (332)
T ss_pred CCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence 9999999988899999999999999998764443 356799999999999999999999999888755 47788999987
Q ss_pred HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 176 ~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
.+.+.+++++||+|+ |++|++++++++..|. .++++.+++++.+.+++++.+.+++.+. +.+.+.+. .+
T Consensus 157 ~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~ 226 (332)
T cd08259 157 RAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKKL-----GG 226 (332)
T ss_pred HhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH----HHHHHHhc-----cC
Confidence 788999999999998 9999999999999999 5777778888888888899877665321 34444332 37
Q ss_pred ccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeeh
Q 020768 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~ 310 (321)
+|++++++|. .....++++++++|+++.+|..... ..++......+++++.++..
T Consensus 227 ~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (332)
T cd08259 227 ADVVIELVGS-PTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSIS 282 (332)
T ss_pred CCEEEECCCh-HHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecC
Confidence 9999999997 4678899999999999999865432 22344445568888888754
No 78
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.3e-33 Score=258.42 Aligned_cols=286 Identities=31% Similarity=0.472 Sum_probs=236.3
Q ss_pred ceeEEEc---cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~---~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++. .+..+++++.+.|.+.+++|+||+.++++|++|+..+.|..... ..+|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~ 78 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK--LPLPHILGSDGAGVVEAVGPGVTN 78 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCC--CCCCeecccceEEEEEEeCCCCCC
Confidence 6888887 44678888999988999999999999999999999887653211 345789999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
|++||+|++.+..+|++|.+|..+.++.|....+.+. ...|++++|+.++.+.++++|+++++.+++.+. .+.+++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~ 157 (342)
T cd08266 79 VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM 157 (342)
T ss_pred CCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence 9999999999999999999999999999998765543 457999999999999999999999998888664 66788888
Q ss_pred H-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+ +...++++++++|+|+ +++|+++++++++.|. .++++++++++.+.++.++.+.+++.. ..++.+.+.+.. .
T Consensus 158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~ 232 (342)
T cd08266 158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYR--KEDFVREVRELT--G 232 (342)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecC--ChHHHHHHHHHh--C
Confidence 6 4588899999999998 7999999999999999 578888888888888888887766532 234444444332 2
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF 312 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~ 312 (321)
+.++|++++++|. ..+...+++++++|+++.+|.... ...++....+.+++++.+.....
T Consensus 233 ~~~~d~~i~~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
T cd08266 233 KRGVDVVVEHVGA-ATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT 293 (342)
T ss_pred CCCCcEEEECCcH-HHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC
Confidence 4579999999996 678899999999999999986544 23455555678999998876543
No 79
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.9e-33 Score=257.29 Aligned_cols=281 Identities=27% Similarity=0.371 Sum_probs=233.4
Q ss_pred eeEEEccC-CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCC
Q 020768 19 MAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (321)
Q Consensus 19 ~a~~~~~~-~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~ 97 (321)
|++++.++ +.+++++.|.|.+.++|++||+.++++|+.|+..+.+.... ..+|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~~g~~~~~~~~ 77 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG---SKYPLVPGHEIVGEVVEVGAGVEGRKV 77 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC---CCCCcccCccceEEEEEECCCCccccc
Confidence 57788776 68999999999999999999999999999999988775421 346889999999999999999999999
Q ss_pred CCEEEEcCC-ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH
Q 020768 98 GDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR 175 (321)
Q Consensus 98 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~ 175 (321)
||+|++.+. .+|++|.+|..+..++|.+..+.+. ...|+|++|+.++.++++++|+++++.+++.+ ....+||++++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~ 156 (330)
T cd08245 78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR 156 (330)
T ss_pred CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999988654 4799999999999999998654432 25799999999999999999999999998855 46678898887
Q ss_pred HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
...++++++|||+|+|++|++++++|+.+|. .++++++++++.++++++|++.+++... .+... . ...++
T Consensus 157 ~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~---~----~~~~~ 226 (330)
T cd08245 157 DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQ---A----AAGGA 226 (330)
T ss_pred hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHH---h----ccCCC
Confidence 7889999999999888899999999999999 6888889999999999999888776432 12111 1 13579
Q ss_pred cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehhHH
Q 020768 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
|+++|++++......++++++++|+++.+|..... ..++..+++.++.++.++..+..
T Consensus 227 d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (330)
T cd08245 227 DVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGR 285 (330)
T ss_pred CEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCH
Confidence 99999988777889999999999999999864332 23335568889999988766543
No 80
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-33 Score=258.86 Aligned_cols=258 Identities=18% Similarity=0.200 Sum_probs=203.8
Q ss_pred hhhceeEEEc-------cCCCeEEEE---ecCCC-CCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCccccc--ce
Q 020768 15 EEVNMAAWLL-------GVNTLKIQP---FELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH--EC 81 (321)
Q Consensus 15 ~~~~~a~~~~-------~~~~l~~~e---~~~p~-~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~--e~ 81 (321)
+.++|++++. .+..|++++ .+.|. ++++||||||.++++|+.|.....+.... ...|+++|+ |+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~---~~~p~~~G~~~~~ 82 (348)
T PLN03154 6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS---YLPPFVPGQRIEG 82 (348)
T ss_pred cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC---CCCCcCCCCeeEe
Confidence 3446777774 124688877 46664 48999999999999999987654332211 235889998 88
Q ss_pred eEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--EEE--CCCCCC
Q 020768 82 AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK--LPDNVS 157 (321)
Q Consensus 82 vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~--~~~--ip~~~~ 157 (321)
+|+|..+|++++.|++||+|... |+|+||++++... +++ +|++++
T Consensus 83 ~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~ 131 (348)
T PLN03154 83 FGVSKVVDSDDPNFKPGDLISGI-------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIP 131 (348)
T ss_pred eEEEEEEecCCCCCCCCCEEEec-------------------------------CCcEEEEEEeccccceEEccCcCCCC
Confidence 99999999999999999999753 7899999999753 544 489998
Q ss_pred hh-hhccc-hhhHHHHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEe
Q 020768 158 LE-EGAMC-EPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVK 232 (321)
Q Consensus 158 ~~-~aa~~-~~~~~a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~ 232 (321)
+. +|+.+ .+..|||+++. .+.+++|++|||+|+ |++|++++|+||++|+ .++++++++++.++++ ++|++.+++
T Consensus 132 ~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~ 210 (348)
T PLN03154 132 LSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 210 (348)
T ss_pred HHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEE
Confidence 86 55544 48889999984 588999999999998 9999999999999999 6888889999999987 799999998
Q ss_pred cCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-c-----cccchhhhccceEEE
Q 020768 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-M-----TVPLTPAAARYLIYS 306 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~k~~~i~ 306 (321)
+.+. .++.+.++++ .+.++|++||++|+ ..+..++++++++|+++.+|...+. . .++...++.|++++.
T Consensus 211 ~~~~-~~~~~~i~~~---~~~gvD~v~d~vG~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~ 285 (348)
T PLN03154 211 YKEE-PDLDAALKRY---FPEGIDIYFDNVGG-DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQ 285 (348)
T ss_pred CCCc-ccHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEE
Confidence 6532 2455555544 24589999999996 6889999999999999999965432 1 135566888999999
Q ss_pred EeehhH
Q 020768 307 FLFHFF 312 (321)
Q Consensus 307 g~~~~~ 312 (321)
|++.+.
T Consensus 286 g~~~~~ 291 (348)
T PLN03154 286 GFLQSD 291 (348)
T ss_pred EEEHHH
Confidence 988653
No 81
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.7e-33 Score=258.31 Aligned_cols=278 Identities=23% Similarity=0.264 Sum_probs=219.6
Q ss_pred ceeEEEccC---CCeEEEE-ecCCCCCCCcEEEEEeEeecccccHhhhhccccC-----------------CcCCCCCcc
Q 020768 18 NMAAWLLGV---NTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----------------DFVVKEPMV 76 (321)
Q Consensus 18 ~~a~~~~~~---~~l~~~e-~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~-----------------~~~~~~p~~ 76 (321)
||++++.++ ..+.+.+ .+.|.+.+++|+|||.++++|++|+..+.|.... .....+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 678887654 3466654 5777889999999999999999999988764321 012456889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCC
Q 020768 77 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV 156 (321)
Q Consensus 77 ~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~ 156 (321)
+|||++|+|+++|++++.|++||+|++.+..+|+.|..|... ...+ ...+|+|++|+.++...++++|+++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~--------~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~ 151 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADI--------DYIG-SERDGGFAEYTVVPAENAYPVNSPL 151 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccc--------cccC-CCCCccceEEEEecHHHceeCCCCC
Confidence 999999999999999999999999999888888887664322 1121 1246999999999999999999999
Q ss_pred Chhhhccc-hhhHHHHHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecC
Q 020768 157 SLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234 (321)
Q Consensus 157 ~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~ 234 (321)
++.+++.+ .++.++|++++...+++|+++||+|+ |++|++++|+|+++|++ ++++++++ +.+.++++|++.+++..
T Consensus 152 ~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~~ 229 (350)
T cd08274 152 SDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILRD 229 (350)
T ss_pred CHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeCC
Confidence 99887755 47888999887788999999999998 99999999999999995 66666555 78888999987555432
Q ss_pred CCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeehhHH
Q 020768 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
.....+ .. ...+.++|++||++|+ ..++.++++++++|+++.+|..... ..+++..++.+++++.|+.....
T Consensus 230 --~~~~~~--~~--~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
T cd08274 230 --APLLAD--AK--ALGGEPVDVVADVVGG-PLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTR 302 (350)
T ss_pred --CccHHH--HH--hhCCCCCcEEEecCCH-HHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCH
Confidence 122222 22 2346789999999997 6889999999999999999965443 56777778889999999876443
No 82
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.5e-33 Score=259.58 Aligned_cols=225 Identities=21% Similarity=0.231 Sum_probs=183.3
Q ss_pred CCeEEEEecCCCCC-CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcC
Q 020768 27 NTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP 105 (321)
Q Consensus 27 ~~l~~~e~~~p~~~-~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~ 105 (321)
+.++++|.|.|+|. ++||||||.|++||+.|..............++|.++|||++|+|+++|+++++|++||+|+..
T Consensus 21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~- 99 (345)
T cd08293 21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF- 99 (345)
T ss_pred cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec-
Confidence 56899999999984 9999999999999999864332111001113467899999999999999999999999999753
Q ss_pred CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhh-----hccchhhHHHHHHHH-HcCC
Q 020768 106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGLHACR-RANI 179 (321)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~-----aa~~~~~~~a~~~l~-~~~~ 179 (321)
.++|+||++++++.++++|+++++++ +++..++.+||+++. .+++
T Consensus 100 -----------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~ 150 (345)
T cd08293 100 -----------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI 150 (345)
T ss_pred -----------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC
Confidence 15799999999999999999864332 334457889999984 5778
Q ss_pred CCC--CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 180 GPE--TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 180 ~~g--~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
++| ++|||+|+ |++|++++|+|+++|+..|+++++++++.+++++ +|++.++++.+ .++.+.++++ .+.++
T Consensus 151 ~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~---~~~gv 225 (345)
T cd08293 151 TPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLREL---CPEGV 225 (345)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHH---CCCCc
Confidence 877 99999998 9999999999999998568888899999998876 99999888654 4666666654 24689
Q ss_pred cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
|++||++|+. .+..++++|+++|+++.+|..
T Consensus 226 d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 226 DVYFDNVGGE-ISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred eEEEECCCcH-HHHHHHHHhccCCEEEEEeee
Confidence 9999999984 679999999999999999853
No 83
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=5.7e-33 Score=255.23 Aligned_cols=245 Identities=20% Similarity=0.181 Sum_probs=198.5
Q ss_pred CCeEEEEecC----CCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccce--eEEEEEeCCCCCCCCCCCE
Q 020768 27 NTLKIQPFEL----PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC--AGVIEKVGSEVKTLVPGDR 100 (321)
Q Consensus 27 ~~l~~~e~~~----p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~--vG~V~~vG~~v~~~~~Gd~ 100 (321)
..|++++.+. |+|+++||||||+++++|+.|++.+.|.... ....|+++|+++ .|.+..+|++++.|++||+
T Consensus 19 ~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~ 96 (338)
T cd08295 19 SDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDL 96 (338)
T ss_pred cceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCCE
Confidence 5789998887 8899999999999999999999988874321 124578899754 4555567888999999999
Q ss_pred EEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CcEEECC-CCCChh-hhc-cchhhHHHHHHHH-
Q 020768 101 VALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLP-DNVSLE-EGA-MCEPLSVGLHACR- 175 (321)
Q Consensus 101 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~ip-~~~~~~-~aa-~~~~~~~a~~~l~- 175 (321)
|..+ |+|+||+++++ ..++++| +++++. +++ +..++.|||+++.
T Consensus 97 V~~~-------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~ 145 (338)
T cd08295 97 VWGF-------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYE 145 (338)
T ss_pred EEec-------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHH
Confidence 9753 78999999999 7999995 568775 555 4457889999984
Q ss_pred HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 176 ~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
.+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.+++++ +|++.++++.+. .++.+.++++ .+.
T Consensus 146 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~---~~~ 220 (338)
T cd08295 146 VCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEE-PDLDAALKRY---FPN 220 (338)
T ss_pred hcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCc-ccHHHHHHHh---CCC
Confidence 588999999999998 9999999999999999 68888899999999988 999998885432 3555555543 246
Q ss_pred CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-c-----cccchhhhccceEEEEeeh
Q 020768 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-M-----TVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~k~~~i~g~~~ 310 (321)
++|++||++|+ ..+..++++++++|+++.+|..... . ..+...++++++++.|++.
T Consensus 221 gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 282 (338)
T cd08295 221 GIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLV 282 (338)
T ss_pred CcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEe
Confidence 89999999997 6889999999999999999965432 1 1345667889999999664
No 84
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=7.1e-33 Score=253.27 Aligned_cols=249 Identities=21% Similarity=0.206 Sum_probs=200.2
Q ss_pred hceeEEEccC-------CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC
Q 020768 17 VNMAAWLLGV-------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89 (321)
Q Consensus 17 ~~~a~~~~~~-------~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG 89 (321)
+||+.++..+ ..+++++.|.|+|+++||+|||.++++|+.|.+.... . ..+|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~----~--~~~p~v~G~e~~G~V~~-- 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR----L--NEGDTMIGTQVAKVIES-- 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc----C--CCCCcEecceEEEEEec--
Confidence 5788777641 4589999999999999999999999999887542111 1 24588999999999985
Q ss_pred CCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC---cEEECCCCCC------hhh
Q 020768 90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKLPDNVS------LEE 160 (321)
Q Consensus 90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~---~~~~ip~~~~------~~~ 160 (321)
.++.|++||+|+.. ++|++|+.++.+ .++++|++++ ...
T Consensus 74 -~~~~~~~Gd~V~~~-------------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~ 121 (329)
T cd08294 74 -KNSKFPVGTIVVAS-------------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLAL 121 (329)
T ss_pred -CCCCCCCCCEEEee-------------------------------CCeeeEEEECCccccceEECCccccccCChHHHH
Confidence 45689999999753 578999999999 9999999988 222
Q ss_pred hccchhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcc
Q 020768 161 GAMCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 161 aa~~~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 238 (321)
+++..++.+||+++ +..++++|++|||+|+ |++|++++|+|+++|+ .++++++++++.++++++|++.++++.+ .
T Consensus 122 a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~--~ 198 (329)
T cd08294 122 GVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT--V 198 (329)
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--c
Confidence 33445888999998 5688999999999997 9999999999999999 6888889999999999999999988653 4
Q ss_pred cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cc------cccchhhhccceEEEEeehh
Q 020768 239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EM------TVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~------~~~~~~~~~k~~~i~g~~~~ 311 (321)
++.+.++++ .+.++|++||++|+ ..+...+++++++|+++.+|.... .. ......++++++++.|++..
T Consensus 199 ~~~~~v~~~---~~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 274 (329)
T cd08294 199 SLEEALKEA---APDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVY 274 (329)
T ss_pred cHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhh
Confidence 566655543 24689999999997 688999999999999999985322 11 12234577899999998754
Q ss_pred H
Q 020768 312 F 312 (321)
Q Consensus 312 ~ 312 (321)
.
T Consensus 275 ~ 275 (329)
T cd08294 275 R 275 (329)
T ss_pred h
Confidence 3
No 85
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=8.5e-33 Score=252.72 Aligned_cols=240 Identities=19% Similarity=0.212 Sum_probs=193.7
Q ss_pred cCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 020768 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE 104 (321)
Q Consensus 25 ~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~ 104 (321)
++..++++|.|.|.|+++||||||.++++|+.|. .|.+.. ...|.++|.|++|+|++.|+ .|++||+|+..
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~---~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~ 85 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRL---KEGDTMMGQQVARVVESKNV---ALPKGTIVLAS 85 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcC---CCCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence 4567999999999999999999999999999654 333211 23478999999999999763 59999999863
Q ss_pred CCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEEC----CCCCChhhh-ccc-hhhHHHHHHH-HHc
Q 020768 105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL----PDNVSLEEG-AMC-EPLSVGLHAC-RRA 177 (321)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~i----p~~~~~~~a-a~~-~~~~~a~~~l-~~~ 177 (321)
++|++|+.++.+.+.++ |+++++++| +.+ .++.|||+++ +.+
T Consensus 86 -------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~ 134 (325)
T TIGR02825 86 -------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEIC 134 (325)
T ss_pred -------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHh
Confidence 56899999999988887 899999886 444 5789999987 568
Q ss_pred CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
++++|++|||+|+ |++|++++|+|+.+|+ +++++++++++.++++++|++.++++++. .++.+.++.. .+.++|
T Consensus 135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gvd 209 (325)
T TIGR02825 135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGYD 209 (325)
T ss_pred CCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCeE
Confidence 8999999999997 9999999999999999 68888899999999999999999886532 2344444332 356899
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-----Ccc--ccchhhhccceEEEEeeh
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-----EMT--VPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~k~~~i~g~~~ 310 (321)
++||++|+ ..+..++++++++|+++.+|.... ..+ .....++++++++.|+..
T Consensus 210 vv~d~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 269 (325)
T TIGR02825 210 CYFDNVGG-EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIV 269 (325)
T ss_pred EEEECCCH-HHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEe
Confidence 99999997 577999999999999999996432 111 123346778999999874
No 86
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.1e-32 Score=242.48 Aligned_cols=261 Identities=37% Similarity=0.576 Sum_probs=217.0
Q ss_pred cEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCC
Q 020768 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNL 122 (321)
Q Consensus 43 evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 122 (321)
||+|||.++++|+.|+..+.+... ....+|.++|||++|+|+++|++++.|++||+|+..+..+|++|++|.. .
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~ 74 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----L 74 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----h
Confidence 689999999999999998887542 1245688999999999999999999999999999999999999999997 6
Q ss_pred CCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHH-cCCCCCCEEEEEcCChhHHHHHHH
Q 020768 123 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLG 200 (321)
Q Consensus 123 ~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~Gag~vG~~a~ql 200 (321)
|+.....+ ....|+|++|+.++.+.++++|+++++.+++.+ .++.+||++++. ..++++++|||+|+|++|++++++
T Consensus 75 ~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~ 153 (271)
T cd05188 75 CPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL 153 (271)
T ss_pred CCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence 76655433 456899999999999999999999999998876 588999999866 455899999999995599999999
Q ss_pred HHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280 (321)
Q Consensus 201 a~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 280 (321)
++..|. .++++++++++.++++++|.+.+++... .++.+.+. ...+.++|++||+++.....+.++++++++|+
T Consensus 154 a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 154 AKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 999997 6888889999999999999888776433 34444443 23467899999999985688999999999999
Q ss_pred EEEEcCCCCCccc-cchhhhccceEEEEeehhHHHhh
Q 020768 281 VCLVGMGHLEMTV-PLTPAAARYLIYSFLFHFFLIVL 316 (321)
Q Consensus 281 ~v~~g~~~~~~~~-~~~~~~~k~~~i~g~~~~~~~~~ 316 (321)
++.+|........ ....++.|++++.|+..+.+..+
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (271)
T cd05188 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDF 264 (271)
T ss_pred EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHH
Confidence 9999976543332 24457889999999998877554
No 87
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.6e-32 Score=252.32 Aligned_cols=264 Identities=24% Similarity=0.279 Sum_probs=212.7
Q ss_pred ceeEEEccCCC----eEEEEecCCCCCC-CcEEEEEeEeecccccHhhhhccccCCcC--CCCCcccccceeEEEEEeCC
Q 020768 18 NMAAWLLGVNT----LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIEKVGS 90 (321)
Q Consensus 18 ~~a~~~~~~~~----l~~~e~~~p~~~~-~evlVkv~a~~l~~~D~~~~~g~~~~~~~--~~~p~~~G~e~vG~V~~vG~ 90 (321)
|||+++.+.+. +.+++.|.|.|.+ +||+||+.++++|+.|+..+.|....... ...|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 78999986543 8999999999987 99999999999999999988775421110 11577999999999999999
Q ss_pred CCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHH
Q 020768 91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV 169 (321)
Q Consensus 91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~ 169 (321)
+++.|++||+|+..+. ..|+|++|+.++.+.++++|+++++.+++.+. ...+
T Consensus 81 ~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t 133 (341)
T cd08290 81 GVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCT 133 (341)
T ss_pred CCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHH
Confidence 9999999999987521 25999999999999999999999998888654 7788
Q ss_pred HHHHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh----hHHHHHHHcCCCeEEecCCC-cccHHH
Q 020768 170 GLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----YRLSVAKELGADNIVKVSTN-LQDIAE 242 (321)
Q Consensus 170 a~~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~----~~~~~~~~~g~~~vi~~~~~-~~~~~~ 242 (321)
+|+++. ...+++|++|||+|+ |++|++++|+|++.|.+ ++++.+++ ++.++++++|++.+++.... ..++.+
T Consensus 134 a~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 212 (341)
T cd08290 134 AYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATE 212 (341)
T ss_pred HHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHH
Confidence 999885 478899999999988 99999999999999995 55555554 67888889999998875431 014444
Q ss_pred HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhHH
Q 020768 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
.+..+. ++++|++|||+|+. .+...+++++++|+++.+|.... ...++...++.+++++.+...+.+
T Consensus 213 ~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (341)
T cd08290 213 LLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRW 280 (341)
T ss_pred HHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHH
Confidence 444432 23799999999984 67789999999999999985433 345666677889999999887654
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.9e-32 Score=251.20 Aligned_cols=246 Identities=21% Similarity=0.295 Sum_probs=203.8
Q ss_pred CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcC
Q 020768 26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP 105 (321)
Q Consensus 26 ~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~ 105 (321)
++.++..|+|.|.|+++||+|||.++++|+.|+..+.+.... ..+|.++|+|++|+|+++|++++.|++||+|+...
T Consensus 14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 90 (336)
T TIGR02817 14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE---AGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG 90 (336)
T ss_pred cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC---CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC
Confidence 456888999999999999999999999999999888764321 34678999999999999999999999999998641
Q ss_pred CccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH-HHcCCCC--
Q 020768 106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP-- 181 (321)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~-- 181 (321)
. ....|+|++|+.++++.++++|+++++++++.++ ...+||+++ +..++++
T Consensus 91 ~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 145 (336)
T TIGR02817 91 D-------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPV 145 (336)
T ss_pred C-------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCC
Confidence 0 1235999999999999999999999999988654 677889888 4577776
Q ss_pred ---CCEEEEEcC-ChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 182 ---ETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 182 ---g~~vlI~Ga-g~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
|++|||+|+ |++|++++|+|+++ |+ .|+++.+++++.++++++|++.+++++. ++.+.+.+ ..+.++|
T Consensus 146 ~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~---~~~~~i~~---~~~~~vd 218 (336)
T TIGR02817 146 AGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK---PLKAQLEK---LGLEAVS 218 (336)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC---CHHHHHHH---hcCCCCC
Confidence 999999997 99999999999998 98 6888888899999999999999887542 45555554 2356899
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~ 309 (321)
+++|++++...+...+++++++|+++.++.. ..++..++..+++++.+..
T Consensus 219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~ 268 (336)
T TIGR02817 219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEF 268 (336)
T ss_pred EEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEE
Confidence 9999987778899999999999999988532 3566666776778777643
No 89
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.5e-31 Score=243.78 Aligned_cols=262 Identities=25% Similarity=0.270 Sum_probs=213.1
Q ss_pred ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||+++++++ ..+++.+.+.|.+.++||+|||.++++|+.|+..+.|..........|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 688888753 45778888888889999999999999999999888775432222345789999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
+++||+|+.... ...|+|++|+.++.++++++|+++++.+++.+. .+.++|..
T Consensus 81 ~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 134 (324)
T cd08244 81 AWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL 134 (324)
T ss_pred CCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH
Confidence 999999987521 136999999999999999999999999887554 66677655
Q ss_pred HHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 174 CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
++.+.++++++++|+|+ |++|++++++|+.+|+ .++++++++++.+.++++|++.+++..+ .++.+.+.+. ..+
T Consensus 135 ~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~--~~~ 209 (324)
T cd08244 135 LDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTR--PDWPDQVREA--LGG 209 (324)
T ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHH--cCC
Confidence 57788999999999997 9999999999999999 5888888999999999999988776543 3455555443 235
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehh
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
.++|+++|++|+. ..+.++++++++|+++.+|.... ...++...++.+++++.++...
T Consensus 210 ~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08244 210 GGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGV 268 (324)
T ss_pred CCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecc
Confidence 6799999999975 66899999999999999996543 2355655677899999987653
No 90
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.9e-31 Score=241.95 Aligned_cols=259 Identities=23% Similarity=0.318 Sum_probs=212.4
Q ss_pred hceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768 17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (321)
Q Consensus 17 ~~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~ 93 (321)
||||+++.+++ .+++++.+.|.+.++|++|||.++++|+.|.....+..... ...|.++|||++|+|+++|++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vG~~v~ 78 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPP--PGSSEILGLEVAGYVEDVGSDVK 78 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccceeeEEEEEEeCCCCC
Confidence 69999998554 57788888888999999999999999999998887643221 34467899999999999999999
Q ss_pred CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHH
Q 020768 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH 172 (321)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~ 172 (321)
.+++||+|+... .+|+|++|+.++.++++++|+++++.+++.+ .++.++++
T Consensus 79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~ 130 (334)
T PTZ00354 79 RFKEGDRVMALL----------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQ 130 (334)
T ss_pred CCCCCCEEEEec----------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999998641 3589999999999999999999999887755 47788998
Q ss_pred HHHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 173 ACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 173 ~l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
++.. ..+++|++|+|+|+ |++|++++++|+++|.+ ++++.+++++.++++++|++.+++.... .++.+.+.++.
T Consensus 131 ~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~-- 206 (334)
T PTZ00354 131 LLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIRYPDE-EGFAPKVKKLT-- 206 (334)
T ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecCCh-hHHHHHHHHHh--
Confidence 8854 78999999999997 99999999999999994 5667888999999999999888775331 12455554432
Q ss_pred hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Ccc-ccchhhhccceEEEEeeh
Q 020768 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMT-VPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~k~~~i~g~~~ 310 (321)
.+.++|++||++++ ..+...+++++++|+++.+|...+ ... +++..++.++.++.++..
T Consensus 207 ~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
T PTZ00354 207 GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTL 267 (334)
T ss_pred CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeec
Confidence 35689999999986 688999999999999999996543 222 777777788889988754
No 91
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.2e-31 Score=238.96 Aligned_cols=250 Identities=30% Similarity=0.414 Sum_probs=206.4
Q ss_pred ccCCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhh-hccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 020768 24 LGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102 (321)
Q Consensus 24 ~~~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~-~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~ 102 (321)
.+++.+++++++.|+++++||+|||.++++|+.|+..+ .+..... ...+|.++|+|++|+|+++|++++.+++||+|+
T Consensus 2 ~~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 35678999999999999999999999999999999887 5543211 123478999999999999999999999999998
Q ss_pred EcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHHcCCCC
Q 020768 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGP 181 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~~~~~~ 181 (321)
.. ..|+|++|+.++++.++++|+++ ..++.. .++++++++++..++++
T Consensus 81 ~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~ 129 (312)
T cd08269 81 GL-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRA 129 (312)
T ss_pred Ee-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCC
Confidence 75 24899999999999999999998 233333 57788888888888999
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 261 (321)
+++++|+|+|++|++++|+|+++|++.++++.+++++.++++++|++.+++.+ ..++.+.+.++. .+.++|+++||
T Consensus 130 ~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~l~~~~--~~~~vd~vld~ 205 (312)
T cd08269 130 GKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD--SEAIVERVRELT--GGAGADVVIEA 205 (312)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC--CcCHHHHHHHHc--CCCCCCEEEEC
Confidence 99999998899999999999999995488888888999999999998877632 345666666543 35689999999
Q ss_pred CCCHHHHHHHHHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEee
Q 020768 262 AGFNKTMSTALSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 262 ~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~ 309 (321)
+|+.......+++|+++|+++.+|... ...++++..+..+++++.++.
T Consensus 206 ~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (312)
T cd08269 206 VGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAV 254 (312)
T ss_pred CCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEec
Confidence 988778899999999999999999653 234556666778899888875
No 92
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-30 Score=238.69 Aligned_cols=279 Identities=29% Similarity=0.355 Sum_probs=224.3
Q ss_pred ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
|||++++. ...+++++.+.|.++++|++||+.++++|++|+....+..... ...|.++|||++|+|+++|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~ 78 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVTR 78 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCcC
Confidence 78888873 3678898999888999999999999999999999887654322 346789999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
+++||+|+..+...|..+.++ .|......+ ...+|+|++|+.++.+.++++|+++++.+++.+. ++.++|++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~------~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~ 151 (336)
T cd08276 79 FKVGDRVVPTFFPNWLDGPPT------AEDEASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA 151 (336)
T ss_pred CCCCCEEEEeccccccccccc------ccccccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence 999999999766565554443 333222222 2357999999999999999999999998887654 67788888
Q ss_pred HH-HcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 174 CR-RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 174 l~-~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+. ...+++|++++|+|+|++|++++++|++.|+ .+++++.++++.+.++++|.+.+++... ..++.+.+.++. .+
T Consensus 152 l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~~ 227 (336)
T cd08276 152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--GG 227 (336)
T ss_pred HHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--CC
Confidence 74 4789999999999879999999999999999 5888888999999999999988876532 144555555542 35
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEeeh
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~~ 310 (321)
.++|++||+++. ..+..++++++++|+++.+|..... ..++...++.|++++.++..
T Consensus 228 ~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
T cd08276 228 RGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAV 285 (336)
T ss_pred CCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEec
Confidence 689999999985 6788999999999999999965442 34555667889999999764
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=6.7e-31 Score=239.60 Aligned_cols=259 Identities=21% Similarity=0.227 Sum_probs=206.2
Q ss_pred ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++.+++ .+++++.|.|.++++||+|||.++++|++|+..+.|.... ...+|.++|||++|+|+++ +++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~--~~~~ 76 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV--TRNYPHTPGIDAAGTVVSS--DDPR 76 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC--CCCCCCccCcccEEEEEEe--CCCC
Confidence 7899998765 7999999999999999999999999999999988775421 1345789999999999998 5678
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
|++||+|+.... +.+ ...+|+|++|+.++++.++++|+++++.+++.+. .+.+++++
T Consensus 77 ~~~Gd~V~~~~~---------------------~~g-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~ 134 (325)
T cd05280 77 FREGDEVLVTGY---------------------DLG-MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALS 134 (325)
T ss_pred CCCCCEEEEccc---------------------ccC-CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHH
Confidence 999999987521 001 1246999999999999999999999999988664 56677777
Q ss_pred HHH---cCCC-CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768 174 CRR---ANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (321)
Q Consensus 174 l~~---~~~~-~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 248 (321)
++. ..+. .+++|+|+|+ |++|++++|+|+++|+ .|+++++++++.++++++|++.+++... ......+.
T Consensus 135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~- 208 (325)
T cd05280 135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED----LLDESKKP- 208 (325)
T ss_pred HHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHH-
Confidence 643 3345 3579999998 9999999999999999 5888889999999999999988876432 11112121
Q ss_pred HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeeh
Q 020768 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~ 310 (321)
...+++|++||++|+ ..+..++++++++|+++.+|.... +..++...++.|++++.++..
T Consensus 209 -~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 209 -LLKARWAGAIDTVGG-DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred -hcCCCccEEEECCch-HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence 224579999999997 688999999999999999996543 335566666689999998654
No 94
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.3e-30 Score=238.00 Aligned_cols=258 Identities=20% Similarity=0.222 Sum_probs=203.1
Q ss_pred ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
|||.++.+++ .++++++|.|.|+++||+||+.++++|++|.....+.. .....+|.++|||++|+|++. +++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~~~g~e~~G~V~~~--~~~~ 76 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGG--KIVKRYPFIPGIDLAGTVVES--NDPR 76 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCc--cccCCCCcCcccceeEEEEEc--CCCC
Confidence 7888887543 48889999999999999999999999999987654211 111345889999999999995 4578
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
|++||+|+..+.. . +...+|+|++|+.++++.++++|+++++.+++.++ .+.+++.+
T Consensus 77 ~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~ 134 (326)
T cd08289 77 FKPGDEVIVTSYD---------------------L-GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALS 134 (326)
T ss_pred CCCCCEEEEcccc---------------------c-CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHH
Confidence 9999999875320 0 11347999999999999999999999999988665 45567776
Q ss_pred HHH---cCCC-CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768 174 CRR---ANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (321)
Q Consensus 174 l~~---~~~~-~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 248 (321)
++. ..+. .+++|||+|+ |++|++++|+|+++|+ .++++++++++.++++++|++.+++.++ . ..+.+.++
T Consensus 135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~~~~~~~~- 209 (326)
T cd08289 135 IHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE--L-QEESIKPL- 209 (326)
T ss_pred HHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh--H-HHHHHHhh-
Confidence 643 3333 4789999998 9999999999999999 5888889999999999999988876432 1 22333333
Q ss_pred HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~ 309 (321)
.+.++|++||++|+ ..+...+++++++|+++.+|.... ..++++..++.+++++.++.
T Consensus 210 --~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 210 --EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred --ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEE
Confidence 25679999999997 688999999999999999997643 23444666778999999974
No 95
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.2e-30 Score=234.20 Aligned_cols=244 Identities=25% Similarity=0.279 Sum_probs=202.6
Q ss_pred ceeEEEcc--CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 18 NMAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 18 ~~a~~~~~--~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
||++++.+ +..+++++.|.|.++++|++||+.++++|+.|...... ...|.++|||++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~ 73 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGP 73 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCC
Confidence 67887765 45688889999999999999999999999999987652 2236789999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l 174 (321)
++||+|+.. ..+|+|++|+.++.++++++|+++++.+++.++ .+.+||+++
T Consensus 74 ~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~ 125 (305)
T cd08270 74 AVGARVVGL----------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRAL 125 (305)
T ss_pred CCCCEEEEe----------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHH
Confidence 999999864 135999999999999999999999999888665 678899998
Q ss_pred HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
......+|++++|+|+ |++|++++++|++.|+ .++.+++++++.+.++++|++..++... ++ .++
T Consensus 126 ~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~---~~~ 191 (305)
T cd08270 126 RRGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------EL---SGA 191 (305)
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----------cc---cCC
Confidence 7655556999999998 9999999999999999 6888888999999999999876554211 11 134
Q ss_pred CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccchhhhc--cceEEEEeehh
Q 020768 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAA--RYLIYSFLFHF 311 (321)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~--k~~~i~g~~~~ 311 (321)
++|+++|++|+ ..+...+++++++|+++.+|.... ...++...+.. ++.++.++...
T Consensus 192 ~~d~vl~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 192 PVDLVVDSVGG-PQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred CceEEEECCCc-HHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEcc
Confidence 79999999997 578999999999999999996543 34566666655 79999988754
No 96
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.98 E-value=3.8e-30 Score=234.75 Aligned_cols=257 Identities=21% Similarity=0.237 Sum_probs=201.8
Q ss_pred eeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 19 ~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
||+++.. +..++++++|.|.++++||+|||.++++|+.|+..+.|.... ....|.++|||++|+|+. .+++.|
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~~ 76 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPRF 76 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCCC
Confidence 5677763 347899999999999999999999999999999888775421 124588999999999998 567789
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l 174 (321)
++||+|+..+.. . +...+|++++|+.++.+.++++|+++++.+++.+. .+.+++.++
T Consensus 77 ~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~ 134 (323)
T TIGR02823 77 REGDEVIVTGYG---------------------L-GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSV 134 (323)
T ss_pred CCCCEEEEccCC---------------------C-CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence 999999875310 0 01246999999999999999999999999888665 556666665
Q ss_pred ---HHcCCCCCC-EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 175 ---RRANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 175 ---~~~~~~~g~-~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
....+.+|+ +|+|+|+ |.+|++++|+|+++|+ .++++..++++.++++++|++.+++..+ .+ ..++.+
T Consensus 135 ~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~-- 207 (323)
T TIGR02823 135 MALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPL-- 207 (323)
T ss_pred HHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHh--
Confidence 334588998 9999998 9999999999999999 5777777788889999999988776432 11 122222
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeeh
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~ 310 (321)
.+.++|.++||+|+ ..+..++++++++|+++.+|.... ...++...++.+++++.++..
T Consensus 208 -~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 208 -EKERWAGAVDTVGG-HTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred -cCCCceEEEECccH-HHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEec
Confidence 23459999999997 578899999999999999997643 234445667789999999643
No 97
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.98 E-value=3.6e-30 Score=234.55 Aligned_cols=250 Identities=26% Similarity=0.322 Sum_probs=207.1
Q ss_pred CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCc
Q 020768 28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI 107 (321)
Q Consensus 28 ~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~ 107 (321)
.+++++.|.|.++++||+|||.++++|+.|...+.+..... ..+|.++|||++|+|+++|++++.+++||+|+..+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSR--PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG-- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCC--CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--
Confidence 67888999999999999999999999999998877654221 34578999999999999999999999999998752
Q ss_pred cCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH-HcCCCCCCEE
Q 020768 108 SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR-RANIGPETNV 185 (321)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~v 185 (321)
..|+|++|+.++...++++|+++++.+++.+ ....++|+++. ...+.+|++|
T Consensus 89 --------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~v 142 (323)
T cd05282 89 --------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWV 142 (323)
T ss_pred --------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEE
Confidence 1489999999999999999999999887754 36677888874 4678999999
Q ss_pred EEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768 186 LIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264 (321)
Q Consensus 186 lI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 264 (321)
+|+|+ |.+|++++++|+++|+ .++++.+++++.++++++|++.+++... .++.+.+.+. ..+.++|++|||+|+
T Consensus 143 lI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~--~~~~~~d~vl~~~g~ 217 (323)
T cd05282 143 IQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEA--TGGAGARLALDAVGG 217 (323)
T ss_pred EEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHH--hcCCCceEEEECCCC
Confidence 99998 9999999999999999 5778888888899999999988887543 3444555443 235689999999998
Q ss_pred HHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhHH
Q 020768 265 NKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
. .....+++++++|+++.+|.... ...++...+..+++++.+...+.+
T Consensus 218 ~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05282 218 E-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQW 266 (323)
T ss_pred H-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHh
Confidence 4 56788999999999999996644 345666666669999999887654
No 98
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.98 E-value=5.7e-30 Score=234.74 Aligned_cols=256 Identities=23% Similarity=0.288 Sum_probs=209.1
Q ss_pred ceeEEEccCCC------eEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768 18 NMAAWLLGVNT------LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91 (321)
Q Consensus 18 ~~a~~~~~~~~------l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~ 91 (321)
||++++.+++. ++++++|.|.+.+++++||+.++++|+.|+..+.+..+ ...+|.++|||++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~ 77 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE 77 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence 67888876543 67778888899999999999999999999988766432 1345779999999999999999
Q ss_pred CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHH
Q 020768 92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG 170 (321)
Q Consensus 92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a 170 (321)
++.|++||+|+.... ...+|+|++|+.++..+++++|+++++.+++.+. .+.++
T Consensus 78 v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta 132 (336)
T cd08252 78 VTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTA 132 (336)
T ss_pred CCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHH
Confidence 999999999986411 0246999999999999999999999998887554 56678
Q ss_pred HHHH-HHcCCCC-----CCEEEEEcC-ChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHH
Q 020768 171 LHAC-RRANIGP-----ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242 (321)
Q Consensus 171 ~~~l-~~~~~~~-----g~~vlI~Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 242 (321)
|+++ +.+.+.+ |++|+|+|+ |++|++++|+|+.+| . .++++++++++.++++++|++.+++... ++.+
T Consensus 133 ~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~ 208 (336)
T cd08252 133 WEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ---DLAE 208 (336)
T ss_pred HHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc---cHHH
Confidence 8886 4577777 999999997 999999999999999 7 6888888899999999999988877542 4444
Q ss_pred HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
.+.. ..+.++|++||++|+...+..++++++++|+++.+|... ..++..+++.+++++.+...
T Consensus 209 ~i~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~ 271 (336)
T cd08252 209 QLEA---LGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFM 271 (336)
T ss_pred HHHh---hCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEe
Confidence 4442 234689999999997778999999999999999998653 45666666678999988654
No 99
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.98 E-value=9.5e-30 Score=232.67 Aligned_cols=255 Identities=24% Similarity=0.277 Sum_probs=207.3
Q ss_pred hceeEEEccC-----CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCC
Q 020768 17 VNMAAWLLGV-----NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91 (321)
Q Consensus 17 ~~~a~~~~~~-----~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~ 91 (321)
.||++++..+ +.+++++.+.|.+.++|++|||.++++|+.|+....|..... ..+|.++|||++|+|+.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~ 78 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEG 78 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCC
Confidence 4889988743 468899999999999999999999999999999887654222 356889999999999999999
Q ss_pred CCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccchhhHHHH
Q 020768 92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL 171 (321)
Q Consensus 92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~ 171 (321)
++.+++||+|... ..|+|++|+.++.+.++++|++. ...+++..++.++|
T Consensus 79 v~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~ 128 (329)
T cd08250 79 VTDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTAS 128 (329)
T ss_pred CCCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHH
Confidence 9999999999875 24999999999999999999973 23344555888999
Q ss_pred HHHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 172 HACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 172 ~~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
+++. ...+++|++++|+|+ |.+|++++|+|++.|. .++++++++++.+.++++|++.+++.+. .++.+.+...
T Consensus 129 ~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~-- 203 (329)
T cd08250 129 IALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKE-- 203 (329)
T ss_pred HHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHh--
Confidence 9985 478999999999997 9999999999999999 5788888888999999999988776433 3444444433
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-----------ccccchhhhccceEEEEeehh
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-----------MTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~k~~~i~g~~~~ 311 (321)
.+.++|++||++|+ ..+...+++++++|+++.+|..... ..++. ..+.+++++.++...
T Consensus 204 -~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 273 (329)
T cd08250 204 -YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPP-KLLAKSASVRGFFLP 273 (329)
T ss_pred -cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccH-HHhhcCceEEEEEhH
Confidence 24679999999996 7889999999999999999965432 12222 346789999998654
No 100
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.98 E-value=3.9e-30 Score=235.12 Aligned_cols=247 Identities=27% Similarity=0.301 Sum_probs=203.1
Q ss_pred hceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768 17 VNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (321)
Q Consensus 17 ~~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~ 93 (321)
+||++.+.++ ..+++++++.|.|+++||+|||.++++|++|+....+.++. ...|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~ 77 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVK 77 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCC
Confidence 4788888643 57999999999999999999999999999999887765432 23577899999999999999999
Q ss_pred CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHH
Q 020768 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH 172 (321)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~ 172 (321)
.+++||+|+... ...|+|++|+.++.+.++++|+++++.+++.+ ....++|.
T Consensus 78 ~~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~ 130 (327)
T PRK10754 78 HIKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYY 130 (327)
T ss_pred CCCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999997531 13589999999999999999999999888754 36677888
Q ss_pred HHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 173 ~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
++. ...+++|++++|+|+ |.+|++++|+|+.+|+ .+++++.++++.++++++|++.+++.+ ..++.+.++++.
T Consensus 131 ~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~-- 205 (327)
T PRK10754 131 LLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYR--EENIVERVKEIT-- 205 (327)
T ss_pred HHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCC--CCcHHHHHHHHc--
Confidence 874 478899999999987 9999999999999999 588888899999999999998887643 345666666553
Q ss_pred hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhh
Q 020768 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAA 299 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~ 299 (321)
.+.++|++|||+|+ ..+...+++++++|+++.+|..... ..++...+.
T Consensus 206 ~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 254 (327)
T PRK10754 206 GGKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILN 254 (327)
T ss_pred CCCCeEEEEECCcH-HHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHh
Confidence 35689999999997 6788999999999999999965432 234444433
No 101
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.98 E-value=2.8e-30 Score=237.50 Aligned_cols=241 Identities=27% Similarity=0.358 Sum_probs=199.7
Q ss_pred ceeEEEccC--CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 18 ~~a~~~~~~--~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
||++++..+ ..+++++++.|.|+++||+|||.++++|++|+....+.. ....|.++|||++|+|+.+|++++.|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF 76 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence 788999877 789999999999999999999999999999988765432 12347789999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l 174 (321)
++||+|+..+...|+ +...+|+|++|+.++.+.++++|+++++.+++.++ ++.++|+++
T Consensus 77 ~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l 136 (339)
T cd08249 77 KVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALAL 136 (339)
T ss_pred CCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHH
Confidence 999999986432221 11357999999999999999999999999888665 788899887
Q ss_pred HH-cCC----------CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHH
Q 020768 175 RR-ANI----------GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242 (321)
Q Consensus 175 ~~-~~~----------~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 242 (321)
.. .++ +++++++|+|+ |.+|++++++|+++|+ .++++. ++++.++++++|++.+++... .++.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~--~~~~~ 212 (339)
T cd08249 137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD--PDVVE 212 (339)
T ss_pred hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC--chHHH
Confidence 43 433 78999999998 9999999999999999 466665 568888999999988887543 45555
Q ss_pred HHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHccc--CCEEEEEcCCCC
Q 020768 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA--GGKVCLVGMGHL 289 (321)
Q Consensus 243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~ 289 (321)
.++++ .++++|++||++|++..+..+++++++ +|+++.+|....
T Consensus 213 ~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~ 258 (339)
T cd08249 213 DIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPE 258 (339)
T ss_pred HHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCc
Confidence 55543 346799999999986788999999999 999999986644
No 102
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=2.9e-29 Score=227.90 Aligned_cols=257 Identities=27% Similarity=0.349 Sum_probs=204.6
Q ss_pred ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++.++ ..+++.+.+.|.++++|++|||.++++|+.|+....+.... ...|.++|||++|+|+++|. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~vG~--~~ 75 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS---VKFPRVLGIEAVGEVEEAPG--GT 75 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCccccceeEEEEEEecC--CC
Confidence 677877644 35778888888899999999999999999999888764321 34578999999999999994 57
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
+++||+|+...... +...+|+|++|+.+++..++++|+++++.+++.+ .++.++|++
T Consensus 76 ~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 133 (320)
T cd08243 76 FTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGS 133 (320)
T ss_pred CCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHH
Confidence 99999998763210 0124699999999999999999999999887754 488889998
Q ss_pred HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+.. ..+++|++|||+|+ |++|++++|+|+++|+ .++++..++++.++++++|++.+++. ..++.+.+.++
T Consensus 134 l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~---- 205 (320)
T cd08243 134 LFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA---- 205 (320)
T ss_pred HHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh----
Confidence 855 67899999999998 9999999999999999 58888888999999999999887642 23555555543
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcc---ccchhh--hccceEEEEeeh
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT---VPLTPA--AARYLIYSFLFH 310 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~k~~~i~g~~~ 310 (321)
+.++|+++|++|+ ..+...+++++++|+++.+|......+ .....+ ..+++++.++..
T Consensus 206 ~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 206 PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 5689999999997 688999999999999999996433211 112222 267888887754
No 103
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=3.2e-29 Score=227.11 Aligned_cols=259 Identities=27% Similarity=0.356 Sum_probs=211.9
Q ss_pred ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++.+ +..+++++.+.|.+.++|++|||.++++|+.|+....+.... ...+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~~ 78 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVTG 78 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCCC
Confidence 78888875 456888888888889999999999999999999887664321 1345789999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
+++||+|+.. ..+|+|++|+.+++++++++|+++++.+++.+ .++.+++++
T Consensus 79 ~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~ 130 (323)
T cd05276 79 WKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQN 130 (323)
T ss_pred CCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHH
Confidence 9999999875 13589999999999999999999998887754 578889988
Q ss_pred HH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+. ...+.++++++|+|+ |++|++++++++..|+ .++++++++++.+.++++|++.+++... .++.+.+.+.. .
T Consensus 131 ~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~ 205 (323)
T cd05276 131 LFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT--EDFAEEVKEAT--G 205 (323)
T ss_pred HHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc--hhHHHHHHHHh--C
Confidence 74 478899999999998 9999999999999999 5888888888999899999887766432 34444444432 2
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehhH
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHFF 312 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~~ 312 (321)
+.++|++||+.|+ ..+...+++++++|+++.+|..+. ...+++..++.|++++.++....
T Consensus 206 ~~~~d~vi~~~g~-~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05276 206 GRGVDVILDMVGG-DYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRS 266 (323)
T ss_pred CCCeEEEEECCch-HHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccc
Confidence 4679999999997 457889999999999999986543 34556666777999999886543
No 104
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=5.4e-29 Score=226.00 Aligned_cols=262 Identities=29% Similarity=0.399 Sum_probs=213.3
Q ss_pred ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++... ..+++.++|.|.+.+++++||+.++++|++|+..+.+.... ....|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~ 78 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDG 78 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCC
Confidence 577777643 45889999999999999999999999999999887764322 1356889999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
|++||+|+..+.. + ....|++++|+.++.+.++++|+++++.+++.+ .++.+++++
T Consensus 79 ~~~Gd~v~~~~~~--------------------~---~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~ 135 (325)
T cd08253 79 LKVGDRVWLTNLG--------------------W---GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRA 135 (325)
T ss_pred CCCCCEEEEeccc--------------------c---CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHH
Confidence 9999999886321 0 013689999999999999999999999988755 477889988
Q ss_pred HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+.. ..+.+|++++|+|+ +++|++++++++..|. .++++++++++.++++++|++.+++... .++.+.+.++. .
T Consensus 136 l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~ 210 (325)
T cd08253 136 LFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA--EDLADRILAAT--A 210 (325)
T ss_pred HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHHHHc--C
Confidence 854 88999999999998 9999999999999998 6888888899999999999988776532 34555554432 2
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
+.++|+++|++++ ......+++++++|+++.+|......++++.+++.+++++.+...
T Consensus 211 ~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd08253 211 GQGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLL 268 (325)
T ss_pred CCceEEEEECCch-HHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeeh
Confidence 4679999999997 467888999999999999997554445666666678888877653
No 105
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.97 E-value=1.1e-28 Score=225.09 Aligned_cols=257 Identities=21% Similarity=0.215 Sum_probs=202.2
Q ss_pred ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
|||+++.+++ .+++++.|.|.|+++||+|||.++++|+.|.....+.... ...+|.++|||++|+|++ ++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~ 76 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSPR 76 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCCC
Confidence 7888888654 6899999999999999999999999999999887764311 123578899999999999 77788
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
+++||+|+..... . +...+|+|++|+.++.+.++++|+++++.+++.+. .+.+++.+
T Consensus 77 ~~~Gd~V~~~~~~--------------~--------~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 134 (324)
T cd08288 77 FKPGDRVVLTGWG--------------V--------GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLC 134 (324)
T ss_pred CCCCCEEEECCcc--------------C--------CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHH
Confidence 9999999875210 0 00135899999999999999999999998888654 55566655
Q ss_pred HH---HcCCC-CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 020768 174 CR---RANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248 (321)
Q Consensus 174 l~---~~~~~-~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 248 (321)
++ ..... ++++++|+|+ |++|++++|+|+++|+ .++++++++++.++++++|++.++++++ ....++.+
T Consensus 135 ~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~- 208 (324)
T cd08288 135 VMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL- 208 (324)
T ss_pred HHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh-
Confidence 43 45555 5789999998 9999999999999999 5888888999999999999998887543 22223332
Q ss_pred HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEee
Q 020768 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~ 309 (321)
...++|.++|++++ .....++..++.+|+++.+|.... +..+++..++.+++++.|..
T Consensus 209 --~~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 209 --QKERWAGAVDTVGG-HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred --ccCcccEEEECCcH-HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEE
Confidence 23468999999996 467788899999999999996532 23455566668999999964
No 106
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=4.4e-29 Score=214.88 Aligned_cols=243 Identities=19% Similarity=0.180 Sum_probs=196.1
Q ss_pred CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEEE
Q 020768 26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG--SEVKTLVPGDRVAL 103 (321)
Q Consensus 26 ~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG--~~v~~~~~Gd~V~~ 103 (321)
+..|+++|+++|+|+++|||+|+.+.+++|.- +|.+.+....-.|+-+|...+|.++... ++...|++||.|..
T Consensus 24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPym----Rgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~ 99 (340)
T COG2130 24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYM----RGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG 99 (340)
T ss_pred CCCceeEeccCCCCCcCceEEEEEEeccCHHH----eecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence 36799999999999999999999999999832 2322222123457778877665554443 55777999999986
Q ss_pred cCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCC---ChhhhccchhhHHHHHHH-HHcCC
Q 020768 104 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV---SLEEGAMCEPLSVGLHAC-RRANI 179 (321)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~---~~~~aa~~~~~~~a~~~l-~~~~~ 179 (321)
. .+|+||.+++.+.+.+++++. ++....+-++..|||.+| +.+..
T Consensus 100 ~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqp 148 (340)
T COG2130 100 V-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQP 148 (340)
T ss_pred c-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCC
Confidence 4 799999999999999998664 333333556889999998 56899
Q ss_pred CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
++|++|+|-+| |++|..+.|+||..|+ +||++..++||.+++++ +|.|.+|||.. +++.+.+.+. .+.|+|+
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a---~P~GIDv 222 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEA---CPKGIDV 222 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHH---CCCCeEE
Confidence 99999999988 9999999999999999 79999999999999987 99999999876 4777776664 5799999
Q ss_pred EEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC--cccc-----chhhhccceEEEEeeh
Q 020768 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE--MTVP-----LTPAAARYLIYSFLFH 310 (321)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~-----~~~~~~k~~~i~g~~~ 310 (321)
.||++|+ +.+.+.+..|+..+|+..+|.-.+. .+.+ +..++.|+++++|++.
T Consensus 223 yfeNVGg-~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv 281 (340)
T COG2130 223 YFENVGG-EVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIV 281 (340)
T ss_pred EEEcCCc-hHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEe
Confidence 9999998 6999999999999999999953221 1122 2337889999999987
No 107
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=9.6e-29 Score=227.92 Aligned_cols=235 Identities=26% Similarity=0.342 Sum_probs=189.6
Q ss_pred ceeEEEccCCC----eEEEEecCCCC-CCCcEEEEEeEeecccccHhhhhccccC-------C-----cCCCCCcccccc
Q 020768 18 NMAAWLLGVNT----LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA-------D-----FVVKEPMVIGHE 80 (321)
Q Consensus 18 ~~a~~~~~~~~----l~~~e~~~p~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~-------~-----~~~~~p~~~G~e 80 (321)
||++++.+++. ++++|.+.|.| +++||+|||.++++|++|+..+.+...+ . .....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 68888775433 88999999999 5999999999999999999988763210 0 013558899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhh
Q 020768 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (321)
Q Consensus 81 ~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~ 160 (321)
++|+|+++|+++++|++||+|+..+.. ...|+|++|+.++.++++++|+++++.+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 135 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEE 135 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHH
Confidence 999999999999999999999875321 1359999999999999999999999988
Q ss_pred hccch-hhHHHHHHHHH-cCCC----CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec
Q 020768 161 GAMCE-PLSVGLHACRR-ANIG----PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233 (321)
Q Consensus 161 aa~~~-~~~~a~~~l~~-~~~~----~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~ 233 (321)
++.+. ...++|+++.. ..+. +|++++|+|+ |++|++++++|+++|+ .++++.++ ++.++++++|++.+++.
T Consensus 136 aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~ 213 (350)
T cd08248 136 AASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDY 213 (350)
T ss_pred HhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEEC
Confidence 87554 77788888754 5554 4999999997 9999999999999999 46666554 67788899999887775
Q ss_pred CCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
.. .++.+.+.. ..++|++||++|+. ....++++++++|+++.+|..
T Consensus 214 ~~--~~~~~~l~~-----~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 214 NN--EDFEEELTE-----RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred CC--hhHHHHHHh-----cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCC
Confidence 32 233333322 35799999999975 889999999999999999854
No 108
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=2.2e-28 Score=223.52 Aligned_cols=246 Identities=21% Similarity=0.195 Sum_probs=195.0
Q ss_pred CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 020768 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (321)
Q Consensus 27 ~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~ 106 (321)
+.++++++|.|.+.++||+|||.++++|+.|.....+......+...+.++|+|++|+|+++|.+ .|++||+|+..
T Consensus 18 ~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~-- 93 (329)
T cd05288 18 DDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF-- 93 (329)
T ss_pred cceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc--
Confidence 56999999999999999999999999999876555442110001123568899999999999964 79999999753
Q ss_pred ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CcEEECCCCCC--hhh-hc-cchhhHHHHHHHHH-cCCC
Q 020768 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVS--LEE-GA-MCEPLSVGLHACRR-ANIG 180 (321)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~-~~~~~ip~~~~--~~~-aa-~~~~~~~a~~~l~~-~~~~ 180 (321)
++|++|+.++. +.++++|++++ +.+ ++ +..++.++|+++.. ..+.
T Consensus 94 -----------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~ 144 (329)
T cd05288 94 -----------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPK 144 (329)
T ss_pred -----------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCC
Confidence 58999999999 99999999985 433 33 44578889998854 7789
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
++++|||+|+ |++|++++|+|+..|+ .++++++++++.+++++ +|++.++++.+ .++.+.+.++. +.++|++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~---~~~~d~v 218 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA---PDGIDVY 218 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc---cCCceEE
Confidence 9999999997 9999999999999999 68888888999999988 99988887543 34555555442 4679999
Q ss_pred EEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC-c-----cccchhhhccceEEEEeehhH
Q 020768 259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHLE-M-----TVPLTPAAARYLIYSFLFHFF 312 (321)
Q Consensus 259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~k~~~i~g~~~~~ 312 (321)
|||+|+ ..+..++++++++|+++.+|..... . .++...++.+++++.++....
T Consensus 219 i~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (329)
T cd05288 219 FDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSD 277 (329)
T ss_pred EEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchh
Confidence 999997 6889999999999999999965432 1 133455678999999876543
No 109
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=3.7e-29 Score=227.96 Aligned_cols=226 Identities=30% Similarity=0.435 Sum_probs=179.4
Q ss_pred CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCc-CCCCCcccccceeEE---EEEeC-CCCCCCCCCCEEE
Q 020768 28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGV---IEKVG-SEVKTLVPGDRVA 102 (321)
Q Consensus 28 ~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~vG~---V~~vG-~~v~~~~~Gd~V~ 102 (321)
....++.+.|.|.+++++|++.++++|+.|++++.|...... ...+|.+.+.++.|. +...| ..+..+..||.+.
T Consensus 19 ~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~ 98 (347)
T KOG1198|consen 19 VLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVV 98 (347)
T ss_pred eEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEe
Confidence 455678999999999999999999999999999998764331 125665555555444 44444 2333455555554
Q ss_pred EcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHH-c---
Q 020768 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR-A--- 177 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~-~--- 177 (321)
.. ...|+|+||+++|+..++++|+++++.+||.++ ++.+||.++.. .
T Consensus 99 ~~----------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~ 150 (347)
T KOG1198|consen 99 AF----------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGK 150 (347)
T ss_pred ec----------------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccc
Confidence 32 357999999999999999999999999999776 78899999854 6
Q ss_pred ---CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 178 ---NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 178 ---~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
+.++|++|||+|+ |++|++++|+|++.++ ..+++.++++++++++++|++++++|++ +++.+.+.+. .+.
T Consensus 151 ~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~---~~~ 224 (347)
T KOG1198|consen 151 RSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY---TGK 224 (347)
T ss_pred cccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh---cCC
Confidence 7999999999987 9999999999999995 5677779999999999999999999876 5666655543 268
Q ss_pred CccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+||+||||+|+. .+...+.++..+|+...++..+
T Consensus 225 ~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~ 258 (347)
T KOG1198|consen 225 GVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVG 258 (347)
T ss_pred CccEEEECCCCC-ccccchhhhccCCceEEEEecc
Confidence 999999999985 7778888888888766666443
No 110
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=6e-28 Score=219.56 Aligned_cols=257 Identities=31% Similarity=0.369 Sum_probs=205.9
Q ss_pred ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++.+++ .+++++.+.|.+.+++|+|||.++++|++|+....+.... ....|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAA--RPPLPAILGCDVAGVVEAVGEGVTR 78 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCCCC
Confidence 7899997543 4888888888899999999999999999999887664321 1335789999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
|++||+|+..... .....|+|++|+.++..+++++|+++++.+++.++ ...++|++
T Consensus 79 ~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 135 (326)
T cd08272 79 FRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEG 135 (326)
T ss_pred CCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHH
Confidence 9999999875210 01246899999999999999999999998877554 67778888
Q ss_pred H-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+ +...+++|++++|+|+ |.+|++++++|+.+|. .++++.++ ++.++++++|++.+++... . +.+.+.++ ..
T Consensus 136 l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~--~~ 208 (326)
T cd08272 136 LVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEH--TG 208 (326)
T ss_pred HHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHh--cC
Confidence 6 5688999999999997 9999999999999999 57777777 8888889999987776432 2 44555443 23
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeeh
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~ 310 (321)
+.++|.++|++++ ......+++++++|+++.+|... ..++.....+++++.+...
T Consensus 209 ~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~ 263 (326)
T cd08272 209 GRGFDVVFDTVGG-ETLDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYSGVFT 263 (326)
T ss_pred CCCCcEEEECCCh-HHHHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEEEEEc
Confidence 5679999999997 57788999999999999998664 2233334478888888764
No 111
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=1.3e-27 Score=216.22 Aligned_cols=245 Identities=30% Similarity=0.391 Sum_probs=201.1
Q ss_pred CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 020768 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (321)
Q Consensus 27 ~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~ 106 (321)
..+.+.+.+.|.+.++|++|||.++++|+.|+....+... ..+|.++|||++|+|+.+|+++++|++||+|+...
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~- 86 (320)
T cd05286 12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG- 86 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-
Confidence 4577778888888999999999999999999988776432 24577899999999999999999999999998751
Q ss_pred ccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHH-HcCCCCCCE
Q 020768 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR-RANIGPETN 184 (321)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~ 184 (321)
..|+|++|+.++.+.++++|+++++.+++.+ ....++++++. ...+.+|++
T Consensus 87 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~ 139 (320)
T cd05286 87 ---------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT 139 (320)
T ss_pred ---------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Confidence 1589999999999999999999999887754 46677888774 488999999
Q ss_pred EEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768 185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (321)
Q Consensus 185 vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 263 (321)
|+|+|+ |++|++++++++.+|+ .+++++.++++.++++++|++.+++... .++.+.+..+ ..+.++|++|||++
T Consensus 140 vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~--~~~~~~d~vl~~~~ 214 (320)
T cd05286 140 VLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD--EDFVERVREI--TGGRGVDVVYDGVG 214 (320)
T ss_pred EEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc--hhHHHHHHHH--cCCCCeeEEEECCC
Confidence 999997 9999999999999999 5888888899999999999988776432 3455555443 23567999999999
Q ss_pred CHHHHHHHHHHcccCCEEEEEcCCCCC-ccccchhhhccceEEEEee
Q 020768 264 FNKTMSTALSATRAGGKVCLVGMGHLE-MTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 264 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~k~~~i~g~~ 309 (321)
+ .....++++++++|+++.+|..... ..++...+..|++++.+..
T Consensus 215 ~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (320)
T cd05286 215 K-DTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPS 260 (320)
T ss_pred c-HhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEe
Confidence 7 5888999999999999999965432 3455555557889887654
No 112
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=1.4e-27 Score=216.91 Aligned_cols=258 Identities=26% Similarity=0.306 Sum_probs=208.5
Q ss_pred ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++.+.. +..+++.+.+.|.+++++++|||.++++|+.|+....+....+ ..+|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vg~~~~~ 78 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP--PGASDILGLEVAGEVVAVGEGVSR 78 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCCCCccceeEEEEEEeCCCCCC
Confidence 57777654 3457778888777899999999999999999988876643222 335789999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
+++||+|+... .+|+|++|+.++..+++++|+++++.+++.+ .++.+++++
T Consensus 79 ~~~Gd~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~ 130 (325)
T TIGR02824 79 WKVGDRVCALV----------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSN 130 (325)
T ss_pred CCCCCEEEEcc----------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHH
Confidence 99999998741 2489999999999999999999998887644 477888888
Q ss_pred H-HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+ +...++++++++|+|+ |++|++++++++.+|+ .++++.+++++.+.++++|++.+++.. ..++.+.+.... .
T Consensus 131 ~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~ 205 (325)
T TIGR02824 131 LFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYR--EEDFVEVVKAET--G 205 (325)
T ss_pred HHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecC--chhHHHHHHHHc--C
Confidence 6 5688999999999998 9999999999999999 578888888888888899987776543 234444444432 2
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeehh
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFHF 311 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~~ 311 (321)
+.++|++++++|+ ..+..++++++++|+++.+|.... ...+++..++.|++++.++...
T Consensus 206 ~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 206 GKGVDVILDIVGG-SYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred CCCeEEEEECCch-HHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehh
Confidence 4579999999996 578899999999999999996542 2356667677899999998753
No 113
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.4e-27 Score=215.82 Aligned_cols=235 Identities=27% Similarity=0.349 Sum_probs=194.1
Q ss_pred ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++.+++ .++++++|.|.+.+++++|||.++++|+.|+....+.... ...|.++|||++|+|+.+|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~ 77 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG 77 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence 7899998877 8999999999999999999999999999999887654321 223678999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
+++||+|...+. ....|+|++|+.++.+.++++|++++..+++.+ ..+.+++++
T Consensus 78 ~~~Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~ 132 (325)
T cd08271 78 WKVGDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA 132 (325)
T ss_pred CCCCCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH
Confidence 999999987531 013589999999999999999999999888755 478888988
Q ss_pred HH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
++ .+.+++|++++|+|+ |++|+++++++++.|. .++++. ++++.++++++|++.+++.. ..++.+.+.++. .
T Consensus 133 ~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~ 206 (325)
T cd08271 133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYN--DEDVCERIKEIT--G 206 (325)
T ss_pred HHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCC--CccHHHHHHHHc--C
Confidence 85 478899999999999 8999999999999999 466665 66788888889998777643 234444454432 2
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
+.++|++++++++. .....+++++++|+++.++..
T Consensus 207 ~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~ 241 (325)
T cd08271 207 GRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGR 241 (325)
T ss_pred CCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCC
Confidence 56799999999975 556789999999999999744
No 114
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.9e-27 Score=214.22 Aligned_cols=262 Identities=27% Similarity=0.385 Sum_probs=210.0
Q ss_pred ceeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++.+. ..+++.+.+.|.+++++++|+|.++++|+.|+....+..... ..+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~ 78 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTG 78 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCc
Confidence 678888643 467888888888999999999999999999998876654322 344788999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
|++||+|+..+... ....|++++|+.++.+.++++|+++++.+++.+ .++.++|++
T Consensus 79 ~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 135 (328)
T cd08268 79 FAVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGA 135 (328)
T ss_pred CCCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHH
Confidence 99999998763210 124589999999999999999999998887754 478889988
Q ss_pred HH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+. ...+.++++++|+|+ |++|++++++++..|. .+++++.++++.+.++++|++.+++.+. .++.+.+.+.. .
T Consensus 136 ~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~ 210 (328)
T cd08268 136 LVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEVLRIT--G 210 (328)
T ss_pred HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHHh--C
Confidence 75 578889999999998 9999999999999999 5888888888888888899887776432 34444444432 2
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-CccccchhhhccceEEEEeeh
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~~~i~g~~~ 310 (321)
+.++|++++++++ .....++++++++|+++.+|.... ...++....+.|++++.+...
T Consensus 211 ~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (328)
T cd08268 211 GKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSL 269 (328)
T ss_pred CCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEec
Confidence 4579999999997 678899999999999999986543 234555445778999888754
No 115
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.96 E-value=3.7e-27 Score=212.20 Aligned_cols=219 Identities=26% Similarity=0.409 Sum_probs=186.3
Q ss_pred CCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccc
Q 020768 36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHC 115 (321)
Q Consensus 36 ~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~ 115 (321)
.|.+.+++++||+.++++|+.|+..+.+.+.. ...+|.++|+|++|+|+++|+++++|++||+|+.+..
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC---------
Confidence 57789999999999999999999988775432 1356889999999999999999999999999987521
Q ss_pred cCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHHHHcCCCCCCEEEEEcC-Chh
Q 020768 116 KGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPI 193 (321)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~Ga-g~v 193 (321)
..+|+|++|+.++++.++++|++++..+++.+. .+.++|++++...+++|++++|+|+ |++
T Consensus 71 -----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~ 133 (303)
T cd08251 71 -----------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGT 133 (303)
T ss_pred -----------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHH
Confidence 246999999999999999999999999888654 7788999988889999999999977 999
Q ss_pred HHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHH
Q 020768 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS 273 (321)
Q Consensus 194 G~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~ 273 (321)
|++++|+++++|+ .++++++++++.+.++++|++.+++... .++.+.+..+. .+.++|+++|++++ ..+...++
T Consensus 134 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~~~~d~v~~~~~~-~~~~~~~~ 207 (303)
T cd08251 134 GLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLT--GGRGVDVVINTLSG-EAIQKGLN 207 (303)
T ss_pred HHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHc--CCCCceEEEECCcH-HHHHHHHH
Confidence 9999999999999 6888888888999999999988887543 35555555442 35679999999985 68889999
Q ss_pred HcccCCEEEEEcCCC
Q 020768 274 ATRAGGKVCLVGMGH 288 (321)
Q Consensus 274 ~l~~~G~~v~~g~~~ 288 (321)
+++++|+++.+|..+
T Consensus 208 ~l~~~g~~v~~~~~~ 222 (303)
T cd08251 208 CLAPGGRYVEIAMTA 222 (303)
T ss_pred HhccCcEEEEEeccC
Confidence 999999999998654
No 116
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.2e-27 Score=215.95 Aligned_cols=231 Identities=24% Similarity=0.292 Sum_probs=189.6
Q ss_pred ceeEEEcc---CCCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~---~~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
.|++++.. +..+++++.+.|.|.++|++||+.++++|+.|+.++.+..... ..+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~ 78 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTG 78 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCcc
Confidence 36677764 3568999999999999999999999999999998887654221 246889999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~ 173 (321)
|++||+|...+ ..|+|++|+.++.+.++++|+++++.+++.+ .++.++|++
T Consensus 79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~ 130 (331)
T cd08273 79 FEVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQM 130 (331)
T ss_pred CCCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHH
Confidence 99999998752 2489999999999999999999999888754 477889988
Q ss_pred HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+.. ..+++|++++|+|+ |++|++++++|+.+|+ .++++.. +++.++++++|+.. ++.. ..++.+. . ..
T Consensus 131 l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~--~~~~~~~--~---~~ 200 (331)
T cd08273 131 LHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR--TKDWLPA--M---LT 200 (331)
T ss_pred HHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC--Ccchhhh--h---cc
Confidence 854 78999999999998 9999999999999999 5777776 88888999999754 3322 2233222 1 12
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
++++|+++|++|+. .+...+++++++|+++.+|....
T Consensus 201 ~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~ 237 (331)
T cd08273 201 PGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSS 237 (331)
T ss_pred CCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCC
Confidence 45799999999975 58899999999999999996543
No 117
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.96 E-value=8.5e-27 Score=211.40 Aligned_cols=256 Identities=30% Similarity=0.476 Sum_probs=206.9
Q ss_pred ceeEEEcc---CCCeEEEEecCCCCC-CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC
Q 020768 18 NMAAWLLG---VNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (321)
Q Consensus 18 ~~a~~~~~---~~~l~~~e~~~p~~~-~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~ 93 (321)
|+++++.. +..+++.+.+ |.+. +++++||+.++++|+.|+..+.+..... ...|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~g~~~~ 77 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVK--PPLPFVPGSEVAGVVEAVGEGVT 77 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCC--CCCCCcccceeEEEEEEeCCCCC
Confidence 68888863 3567888887 7766 4999999999999999998877643211 23467899999999999999999
Q ss_pred CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhcc-chhhHHHHH
Q 020768 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGLH 172 (321)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~-~~~~~~a~~ 172 (321)
.+++||+|+..+ ..|++++|+.++.+.++++|++++..+++. ..+..++++
T Consensus 78 ~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~ 129 (323)
T cd08241 78 GFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYH 129 (323)
T ss_pred CCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHH
Confidence 999999998752 248999999999999999999999888764 457788888
Q ss_pred HHH-HcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 173 ~l~-~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
++. ...++++++++|+|+ |++|++++++|+..|+ .+++++.++++.++++++|++.+++... .++.+.+..+.
T Consensus 130 ~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~-- 204 (323)
T cd08241 130 ALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRD--PDLRERVKALT-- 204 (323)
T ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCC--ccHHHHHHHHc--
Confidence 875 578899999999998 9999999999999999 5888888889999999999877766433 45555555542
Q ss_pred hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCcc-ccchhhhccceEEEEeeh
Q 020768 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMT-VPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~k~~~i~g~~~ 310 (321)
.+.++|.++|++|+ ..+..++++++++|+++.+|....... ++....+.+++++.+...
T Consensus 205 ~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 205 GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYW 264 (323)
T ss_pred CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEec
Confidence 25679999999997 688899999999999999996543322 444456778999998764
No 118
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.96 E-value=5.9e-27 Score=216.40 Aligned_cols=240 Identities=21% Similarity=0.277 Sum_probs=183.1
Q ss_pred eeEEEccC-CCeEEEEecCCCC---CCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCC-
Q 020768 19 MAAWLLGV-NTLKIQPFELPSL---GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK- 93 (321)
Q Consensus 19 ~a~~~~~~-~~l~~~e~~~p~~---~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~- 93 (321)
|++++.++ +.+++++++.|.| +++||+||+.++++|++|+..+.+.. .. ....|.++|+|++|+|+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~-~~-~~~~~~~~g~e~~G~V~~vG~~v~~ 79 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYT-FH-FKVKEKGLGRDYSGVIVKVGSNVAS 79 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccc-cc-cccCCCccCceeEEEEEEeCccccc
Confidence 56677654 3566666665555 99999999999999999988765321 11 012377899999999999999998
Q ss_pred CCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----cEEECCCCCChhhhccch-hhH
Q 020768 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCE-PLS 168 (321)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~----~~~~ip~~~~~~~aa~~~-~~~ 168 (321)
.|++||+|+.....+| ...|+|++|+.++.. .++++|+++++.+++.+. .+.
T Consensus 80 ~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ 136 (352)
T cd08247 80 EWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLG 136 (352)
T ss_pred CCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHH
Confidence 8999999987632111 135999999999987 799999999999988654 677
Q ss_pred HHHHHHHH-c-CCCCCCEEEEEcC-ChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcCCCeEEecCCCcc-cHHHH
Q 020768 169 VGLHACRR-A-NIGPETNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ-DIAEE 243 (321)
Q Consensus 169 ~a~~~l~~-~-~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~~ 243 (321)
++|++++. . .+++|++++|+|+ +++|++++|+|+++|. +.++++.+ +++.++++++|++.+++.++... .+...
T Consensus 137 ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~ 215 (352)
T cd08247 137 TAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKP 215 (352)
T ss_pred HHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHH
Confidence 88988866 4 6999999999998 8999999999998754 35666654 45556778999988887544221 03333
Q ss_pred HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc---cCCEEEEEc
Q 020768 244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR---AGGKVCLVG 285 (321)
Q Consensus 244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g 285 (321)
+.+.. ..++++|++|||+|+.......+++++ ++|+++.++
T Consensus 216 ~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 216 VLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred HHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence 32221 125689999999998678889999999 999999875
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.96 E-value=1.8e-26 Score=208.06 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=195.4
Q ss_pred ceeEEEccCC---CeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCC
Q 020768 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (321)
Q Consensus 18 ~~a~~~~~~~---~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~ 94 (321)
||++++..++ .+.+++.+.|.++++||+|||.++++|+.|+..+.+..........|..+|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 6788887544 3667888888899999999999999999999887764321111345889999999999999999999
Q ss_pred CCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHH
Q 020768 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (321)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~ 173 (321)
+++||+|+..+.. ...|+|++|+.++...++++|+++++.+++.+. ...+++++
T Consensus 81 ~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 135 (309)
T cd05289 81 FKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQA 135 (309)
T ss_pred CCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHH
Confidence 9999999876310 135899999999999999999999988877554 66778888
Q ss_pred HHH-cCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 174 l~~-~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+.. ..+.+|++++|+|+ |.+|++++++++..|. .++++..++ +.++++++|++.+++... .++.+ ...
T Consensus 136 ~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~~ 205 (309)
T cd05289 136 LFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK--GDFER------AAA 205 (309)
T ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------ccC
Confidence 765 55899999999998 9999999999999999 466666666 788888999877776443 22222 123
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEe
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFL 308 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~ 308 (321)
+.++|+++|++|+. ....++++++++|+++.+|....... ....+++++...
T Consensus 206 ~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~ 257 (309)
T cd05289 206 PGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFV 257 (309)
T ss_pred CCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEE
Confidence 56799999999974 78899999999999999986543211 233455555544
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.4e-25 Score=205.19 Aligned_cols=254 Identities=29% Similarity=0.378 Sum_probs=198.8
Q ss_pred eeEEEccC---CCeEEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCC
Q 020768 19 MAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (321)
Q Consensus 19 ~a~~~~~~---~~l~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~ 95 (321)
|++++... ..+++.+.+.|.+.++|++||+.++++|+.|+..+.+.... ....|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~ 78 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDF 78 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCC
Confidence 34555432 36888888888899999999999999999999888765322 13457789999999999999999999
Q ss_pred CCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH
Q 020768 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (321)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l 174 (321)
++||+|+... ..|+|++|+.++.+.++++|+++++.+++.+. ++.++|+++
T Consensus 79 ~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~ 130 (337)
T cd08275 79 KVGDRVMGLT----------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYAL 130 (337)
T ss_pred CCCCEEEEec----------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHH
Confidence 9999998751 24899999999999999999999988877554 788889887
Q ss_pred -HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 175 -RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 175 -~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
+...+++|++|+|+|+ |++|++++++|+.+ . .+.+++ ..+++.++++++|++.+++... .++.+.++.+.
T Consensus 131 ~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--- 203 (337)
T cd08275 131 FELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYRT--QDYVEEVKKIS--- 203 (337)
T ss_pred HHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCCC--CcHHHHHHHHh---
Confidence 4578899999999998 99999999999998 2 223332 3456788888899987776432 45555555542
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC--cc---------------ccchhhhccceEEEEeeh
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE--MT---------------VPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~---------------~~~~~~~~k~~~i~g~~~ 310 (321)
+.++|+++|++|+ .....++++++++|+++.+|..... .. ++...++.+++++.++..
T Consensus 204 ~~~~d~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (337)
T cd08275 204 PEGVDIVLDALGG-EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNL 278 (337)
T ss_pred CCCceEEEECCcH-HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeec
Confidence 4679999999997 5778999999999999999865321 11 112345778888888754
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.95 E-value=1.1e-25 Score=200.85 Aligned_cols=228 Identities=26% Similarity=0.332 Sum_probs=185.6
Q ss_pred CcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCC
Q 020768 42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN 121 (321)
Q Consensus 42 ~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~ 121 (321)
+|++||+.++++|+.|+....+.. ..+|.++|||++|+|+++|+++..|++||+|+..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~----------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL----------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE-----------------
Confidence 589999999999999999887643 2357899999999999999999999999999875
Q ss_pred CCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHH
Q 020768 122 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTM 198 (321)
Q Consensus 122 ~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~ 198 (321)
..|+|++|+.++.+.++++|+++++.+++.+ .+..+++.++ +...+++|++++|+|+ |++|++++
T Consensus 59 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~ 126 (293)
T cd05195 59 ------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAI 126 (293)
T ss_pred ------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHH
Confidence 2489999999999999999999999888765 4777888887 4478999999999986 99999999
Q ss_pred HHHHHcCCCeEEEEeCChhHHHHHHHcC--CCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcc
Q 020768 199 LGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR 276 (321)
Q Consensus 199 qla~~~g~~~vv~v~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 276 (321)
|+|+.+|. .++++..++++.+.+++++ ++.+++.. ..++.+.+.++. .+.++|+++|++|+. .++..+++++
T Consensus 127 ~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~ 200 (293)
T cd05195 127 QLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLA 200 (293)
T ss_pred HHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcc
Confidence 99999999 6888888888999998888 66666532 234555555442 256799999999985 8899999999
Q ss_pred cCCEEEEEcCCCCC--ccccchhhhccceEEEEeeh
Q 020768 277 AGGKVCLVGMGHLE--MTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 277 ~~G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~ 310 (321)
++|+++.+|..... ..++... +.+++++.+...
T Consensus 201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 235 (293)
T cd05195 201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDL 235 (293)
T ss_pred cCceEEEeeccccccCCccchhh-hccCCeEEEEeH
Confidence 99999999965432 2344433 346677766543
No 122
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.6e-25 Score=203.27 Aligned_cols=226 Identities=30% Similarity=0.337 Sum_probs=179.6
Q ss_pred EEEEecCCCCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccC
Q 020768 30 KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC 109 (321)
Q Consensus 30 ~~~e~~~p~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~ 109 (321)
++++.|.|.++++||+||+.++++|+.|+..+.+..........|..+|||++|+|+++|++++.+.+||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 788999999999999999999999999998877643211112346789999999999999999999999999875310
Q ss_pred CCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccc-hhhHHHHHHHHH-cCCCCCCEEEE
Q 020768 110 WRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRR-ANIGPETNVLI 187 (321)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI 187 (321)
...|+|++|+.++.+.++++|+++++.+++.+ .++.++|++++. ..+++|++++|
T Consensus 93 -----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli 149 (319)
T cd08267 93 -----------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI 149 (319)
T ss_pred -----------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 13589999999999999999999999887755 477889998865 55899999999
Q ss_pred EcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC-H
Q 020768 188 MGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF-N 265 (321)
Q Consensus 188 ~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~ 265 (321)
+|+ |++|++++++|+.+|+ .+++++++ ++.++++++|++.+++.... ++. .. ...+.++|+++||+|+ .
T Consensus 150 ~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~--~~~---~~--~~~~~~~d~vi~~~~~~~ 220 (319)
T cd08267 150 NGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTE--DFV---AL--TAGGEKYDVIFDAVGNSP 220 (319)
T ss_pred EcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCC--Ccc---hh--ccCCCCCcEEEECCCchH
Confidence 998 9999999999999999 57777655 78888899999877764432 222 11 1235679999999995 2
Q ss_pred HHHHHHHHHcccCCEEEEEcCCCC
Q 020768 266 KTMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 266 ~~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
......+..++++|+++.+|....
T Consensus 221 ~~~~~~~~~l~~~g~~i~~g~~~~ 244 (319)
T cd08267 221 FSLYRASLALKPGGRYVSVGGGPS 244 (319)
T ss_pred HHHHHhhhccCCCCEEEEeccccc
Confidence 233344445999999999996543
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.94 E-value=4.9e-25 Score=196.44 Aligned_cols=223 Identities=28% Similarity=0.401 Sum_probs=183.1
Q ss_pred EEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCC
Q 020768 46 VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE 125 (321)
Q Consensus 46 Vkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 125 (321)
||+.++++|+.|+..+.+.+ ..|.++|||++|+|+++|++++.|++||+|+..
T Consensus 2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~--------------------- 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--------------------- 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------
Confidence 89999999999999887643 236789999999999999999999999999875
Q ss_pred ccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH-HHcCCCCCCEEEEEcC-ChhHHHHHHHHH
Q 020768 126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAR 202 (321)
Q Consensus 126 ~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~Ga-g~vG~~a~qla~ 202 (321)
..|+|++|+.++.++++++|+++++.+++.+. ...++++++ +...+++|++|+|+|+ |.+|++++++++
T Consensus 55 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~ 126 (288)
T smart00829 55 --------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQ 126 (288)
T ss_pred --------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHH
Confidence 24899999999999999999999999888664 677888887 5688999999999997 999999999999
Q ss_pred HcCCCeEEEEeCChhHHHHHHHcCC--CeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768 203 AFGAPRIVIVDVDDYRLSVAKELGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280 (321)
Q Consensus 203 ~~g~~~vv~v~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 280 (321)
+.|+ .++++++++++.++++++|+ +.+++... .++.+.+.+.. .+.++|+++|++++ ..+...+++++++|+
T Consensus 127 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~ 200 (288)
T smart00829 127 HLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCLAPGGR 200 (288)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhccCCcE
Confidence 9999 68888889999999999998 66666432 34555554432 24579999999995 688899999999999
Q ss_pred EEEEcCCCC--CccccchhhhccceEEEEeeh
Q 020768 281 VCLVGMGHL--EMTVPLTPAAARYLIYSFLFH 310 (321)
Q Consensus 281 ~v~~g~~~~--~~~~~~~~~~~k~~~i~g~~~ 310 (321)
++.+|.... ...++... +.+++++.+...
T Consensus 201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 231 (288)
T smart00829 201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDL 231 (288)
T ss_pred EEEEcCcCCccccccchhh-hcCCceEEEEEH
Confidence 999996532 23444444 457777777644
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.93 E-value=1.5e-24 Score=193.74 Aligned_cols=199 Identities=31% Similarity=0.375 Sum_probs=164.6
Q ss_pred CCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEE
Q 020768 71 VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF 150 (321)
Q Consensus 71 ~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~ 150 (321)
.++|.++|||++|+|+++|+++++|++||+|+.. +.|++|+.++.+.++
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~~ 66 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANLLV 66 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHHee
Confidence 5689999999999999999999999999999865 468999999999999
Q ss_pred ECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-CCe
Q 020768 151 KLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-ADN 229 (321)
Q Consensus 151 ~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~~~ 229 (321)
++|+++++.+++.+.++.++|++++..++++|++++|+|+|++|++++++|+++|.++++++++++++.++++++| .+.
T Consensus 67 ~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~ 146 (277)
T cd08255 67 PLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADP 146 (277)
T ss_pred ECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCcc
Confidence 9999999988886677888999888889999999999988999999999999999954888999999999999999 454
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEEee
Q 020768 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLF 309 (321)
Q Consensus 230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~ 309 (321)
++.... .. ..+.++|++||+++....+...+++++++|+++.+|............+..+.+++.+..
T Consensus 147 ~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 214 (277)
T cd08255 147 VAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQ 214 (277)
T ss_pred ccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeec
Confidence 443211 01 125679999999998788899999999999999999764431112234666777888776
Q ss_pred hhH
Q 020768 310 HFF 312 (321)
Q Consensus 310 ~~~ 312 (321)
...
T Consensus 215 ~~~ 217 (277)
T cd08255 215 VYG 217 (277)
T ss_pred ccc
Confidence 543
No 125
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=6.7e-24 Score=162.94 Aligned_cols=109 Identities=39% Similarity=0.698 Sum_probs=96.2
Q ss_pred CCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCC
Q 020768 41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120 (321)
Q Consensus 41 ~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~ 120 (321)
|+||||||++++||++|++++++.. ......|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~--~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGP--PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSS--SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhcc--ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 6899999999999999999999842 22267899999999999999999999999999999999889999999999999
Q ss_pred CCCCCccccccCCCCCcceeEEEecCCcEEEC
Q 020768 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152 (321)
Q Consensus 121 ~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~i 152 (321)
++|++...++. ..+|+|+||+++++++++++
T Consensus 79 ~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGL-GLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEETTT-SSTCSSBSEEEEEGGGEEEE
T ss_pred ccCCCCCEeEc-CCCCcccCeEEEehHHEEEC
Confidence 99998877765 48999999999999999875
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.90 E-value=1.6e-21 Score=167.83 Aligned_cols=240 Identities=18% Similarity=0.173 Sum_probs=180.7
Q ss_pred EEEEecCC-CCCCCcEEEEEeEeecccccHhhhhccccCCcCCCCCcccc----cceeEEEEEeCCCCCCCCCCCEEEEc
Q 020768 30 KIQPFELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG----HECAGVIEKVGSEVKTLVPGDRVALE 104 (321)
Q Consensus 30 ~~~e~~~p-~~~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~~~~p~~~G----~e~vG~V~~vG~~v~~~~~Gd~V~~~ 104 (321)
+..+++++ .+++++||||.++.+..|.-...++-.. +...-.|+.+| ..++|+|++ ++-.++++||.|+..
T Consensus 25 ~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~--~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~ 100 (343)
T KOG1196|consen 25 TTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPD--PSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGI 100 (343)
T ss_pred eeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCC--cccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEe
Confidence 33445544 4599999999999998776543332211 11112234344 278999999 466789999999875
Q ss_pred CCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--cEEECCC--CCChhh--hccchhhHHHHHHH-HHc
Q 020768 105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPD--NVSLEE--GAMCEPLSVGLHAC-RRA 177 (321)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~--~~~~ip~--~~~~~~--aa~~~~~~~a~~~l-~~~ 177 (321)
-+|.||.++++. ..++++. ++++-- .++-++..|||..+ +..
T Consensus 101 -------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~ 149 (343)
T KOG1196|consen 101 -------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEIC 149 (343)
T ss_pred -------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhc
Confidence 389999998764 4444443 333333 33446888999887 568
Q ss_pred CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
..+.|++|+|-|| |++|+++.|+|+.+|+ .||++..++||..+++ ++|.+..+||.+. .+..+++++. ...|+
T Consensus 150 ~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~---~P~GI 224 (343)
T KOG1196|consen 150 SPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRC---FPEGI 224 (343)
T ss_pred CCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHh---CCCcc
Confidence 8999999999998 9999999999999999 8999999999999886 5899999999764 3666666653 47899
Q ss_pred cEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC---Cccc---cchhhhccceEEEEeeh
Q 020768 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL---EMTV---PLTPAAARYLIYSFLFH 310 (321)
Q Consensus 256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~---~~~~~~~k~~~i~g~~~ 310 (321)
|+.||.+|+ ..+++.+..++.+||++.+|+-.. +.+. +...++.|++.|+|++.
T Consensus 225 DiYfeNVGG-~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv 284 (343)
T KOG1196|consen 225 DIYFENVGG-KMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLV 284 (343)
T ss_pred eEEEeccCc-HHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEe
Confidence 999999998 799999999999999999996432 2222 23557899999999764
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.86 E-value=1.4e-21 Score=191.14 Aligned_cols=242 Identities=16% Similarity=0.178 Sum_probs=192.8
Q ss_pred CCeEEEEecCC--CC-CCCcEEEEEeEeecccccHhhhhccccCCcC----CCCCcccccceeEEEEEeCCCCCCCCCCC
Q 020768 27 NTLKIQPFELP--SL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFV----VKEPMVIGHECAGVIEKVGSEVKTLVPGD 99 (321)
Q Consensus 27 ~~l~~~e~~~p--~~-~~~evlVkv~a~~l~~~D~~~~~g~~~~~~~----~~~p~~~G~e~vG~V~~vG~~v~~~~~Gd 99 (321)
..++|.|.|.. .| .++.=+--|.|+.+|++|+.+..|+...+.. .....++|-||+|+- .-|.
T Consensus 1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGR 1496 (2376)
T ss_pred cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCc
Confidence 56889888875 23 6666788999999999999999987654322 233568999999884 4499
Q ss_pred EEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCCCCChhhhccch-hhHHHHHHH-HHc
Q 020768 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA 177 (321)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~ 177 (321)
||..+. .--++++.+.++.+.++.+|++...++|++.+ .++|+|+++ .+.
T Consensus 1497 RvM~mv----------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG 1548 (2376)
T KOG1202|consen 1497 RVMGMV----------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRG 1548 (2376)
T ss_pred EEEEee----------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhc
Confidence 998762 23578888999999999999999999999887 678999998 679
Q ss_pred CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC----CeEEecCCCcccHHHHHHHHHHHhC
Q 020768 178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA----DNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
.+++|+++||+++ |++|++|+.+|.++|+ .|+.+..+.||++++.+.-+ +.+-| .++.+|...+ +..+.|
T Consensus 1549 ~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~N--SRdtsFEq~v--l~~T~G 1623 (2376)
T KOG1202|consen 1549 QMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFAN--SRDTSFEQHV--LWHTKG 1623 (2376)
T ss_pred cccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccc--cccccHHHHH--HHHhcC
Confidence 9999999999955 9999999999999999 68999899999998875332 22222 3445555443 335679
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCCC--ccccchhhhccceEEEEeehhHH
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHLE--MTVPLTPAAARYLIYSFLFHFFL 313 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~k~~~i~g~~~~~~ 313 (321)
+|+|+|++...+ +.+++.++||+.+|||..+|-..-. .++-++ .+.|+++++|.+.++.
T Consensus 1624 rGVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMa-vfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1624 RGVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMA-VFLKNVSFHGILLDSV 1684 (2376)
T ss_pred CCeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhh-hhhcccceeeeehhhh
Confidence 999999999985 7899999999999999999955433 344444 6779999999998764
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.75 E-value=1.8e-17 Score=131.10 Aligned_cols=122 Identities=27% Similarity=0.443 Sum_probs=108.2
Q ss_pred hhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHH
Q 020768 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA 271 (321)
Q Consensus 192 ~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 271 (321)
++|++++|+|+++|. +|++++++++|+++++++|++.++++++ .++.+.++++. .+.++|+||||+|++..++.+
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELT--GGRGVDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHT--TTSSEEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--ccccccccccc--ccccceEEEEecCcHHHHHHH
Confidence 589999999999995 8999999999999999999999998755 45777777763 246899999999988999999
Q ss_pred HHHcccCCEEEEEcCCC-CCccccchhhhccceEEEEeehhHHHhhcc
Q 020768 272 LSATRAGGKVCLVGMGH-LEMTVPLTPAAARYLIYSFLFHFFLIVLGY 318 (321)
Q Consensus 272 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~ 318 (321)
+++++++|+++++|... ...+++...+++|++++.|++.+..+.+..
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 123 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQE 123 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHH
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHH
Confidence 99999999999999887 568899999999999999999998776654
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.40 E-value=7.5e-12 Score=119.20 Aligned_cols=132 Identities=16% Similarity=0.196 Sum_probs=99.7
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCc-----------ccHHHHHH
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNL-----------QDIAEEVE 245 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~-----------~~~~~~~~ 245 (321)
+..++++|+|+|+|.+|+++++.|+.+|+ .|++++.+++|++.++++|++.+ ++..+.. .++.+..+
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 34689999999999999999999999999 79999999999999999999854 4432211 12222222
Q ss_pred HHHHHhCCCccEEEEcCCCH-----HH-HHHHHHHcccCCEEEEEcCC-CCC--ccccchhhhc-cceEEEEeeh
Q 020768 246 KIQKAMGTGIDVSFDCAGFN-----KT-MSTALSATRAGGKVCLVGMG-HLE--MTVPLTPAAA-RYLIYSFLFH 310 (321)
Q Consensus 246 ~~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-k~~~i~g~~~ 310 (321)
+......+++|++|+|++.+ .. .+..++.++++|+++.+|.. ++. .+++..+++. +++++.|..+
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n 314 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD 314 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCC
Confidence 22111125799999999963 35 48999999999999999974 443 4455556775 9999999765
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.12 E-value=1.1e-09 Score=101.93 Aligned_cols=115 Identities=15% Similarity=0.194 Sum_probs=97.5
Q ss_pred CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.-+|++|+|.|+|.+|+.+++.++.+|+ +|++++.++.|.+.++++|++.+ +. . +. -.++|+|
T Consensus 199 ~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~~-------~----e~----v~~aDVV 261 (413)
T cd00401 199 MIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-TM-------E----EA----VKEGDIF 261 (413)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-cH-------H----HH----HcCCCEE
Confidence 4689999999999999999999999999 68889999999999999998432 11 1 11 1358999
Q ss_pred EEcCCCHHHHHHH-HHHcccCCEEEEEcCCCCCccccchhhhccceEEEEeehhH
Q 020768 259 FDCAGFNKTMSTA-LSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSFLFHFF 312 (321)
Q Consensus 259 id~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g~~~~~ 312 (321)
|+|+|+...+... +..++++|+++++|.. +.++|...+..+++++.|+..+.
T Consensus 262 I~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~ 314 (413)
T cd00401 262 VTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQV 314 (413)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCc
Confidence 9999998888865 9999999999999954 56899998999999999998864
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.69 E-value=3.8e-07 Score=87.08 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=90.0
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCC------------cccHHHHHHHH
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN------------LQDIAEEVEKI 247 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~------------~~~~~~~~~~~ 247 (321)
.++++++|+|+|.+|+++++.++.+|+ .|++++.+.++++.++++|++.+...... ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467899999999999999999999999 59999999999999999998763221110 12233222232
Q ss_pred HHHhCCCccEEEEcC---CCHH---HHHHHHHHcccCCEEEEEcCCC-CCccccc-hh-hhc-cceEEEEee
Q 020768 248 QKAMGTGIDVSFDCA---GFNK---TMSTALSATRAGGKVCLVGMGH-LEMTVPL-TP-AAA-RYLIYSFLF 309 (321)
Q Consensus 248 ~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~-~~-~~~-k~~~i~g~~ 309 (321)
......++|++|+|+ |.+. ..+..++.+++|+.++.++... +..++.. .+ +.. .++++.|..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeC
Confidence 222246799999999 6544 5667899999999999998543 3322221 11 222 358888764
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.47 E-value=2.7e-06 Score=79.71 Aligned_cols=104 Identities=22% Similarity=0.293 Sum_probs=80.6
Q ss_pred HHHHHHHc-CCC-CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 020768 170 GLHACRRA-NIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 170 a~~~l~~~-~~~-~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~ 247 (321)
.|.++.++ ++. +|++|+|+|.|.+|..+++.++.+|+ +|++++.++.|...+...|+. +.+ . .++
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l----~ea 264 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------M----EEA 264 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------H----HHH
Confidence 45555544 444 89999999999999999999999999 699998888887777666754 221 1 122
Q ss_pred HHHhCCCccEEEEcCCCHHHHH-HHHHHcccCCEEEEEcCCCCC
Q 020768 248 QKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHLE 290 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~ 290 (321)
. .++|++|+++|+...+. ..+..+++++.++..|....+
T Consensus 265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~E 304 (425)
T PRK05476 265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNE 304 (425)
T ss_pred H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCc
Confidence 1 36899999999877776 688999999999999976544
No 133
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.39 E-value=1.2e-05 Score=70.80 Aligned_cols=133 Identities=22% Similarity=0.310 Sum_probs=87.2
Q ss_pred cceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD 216 (321)
Q Consensus 137 ~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~ 216 (321)
+|.+|.. +...++.+++++++..+..-.+.. .+..+.. .+.++++||-+|+|. |.+++.+++ .|...+++++.++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~~-~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~ 152 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPTTRL-CLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDP 152 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHHHHH-HHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCH
Confidence 3455544 667889999999888765332222 2333332 256899999999987 888876554 6776799999999
Q ss_pred hHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCCCC
Q 020768 217 YRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 217 ~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
...+.+++. +....+.... +...+|+|+.+.... ..++.+.+.|+++|.+++.|....
T Consensus 153 ~~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~~ 217 (250)
T PRK00517 153 QAVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILEE 217 (250)
T ss_pred HHHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcHh
Confidence 888877653 2211111100 012589998765543 346678899999999999886543
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.39 E-value=1.6e-05 Score=71.63 Aligned_cols=111 Identities=18% Similarity=0.182 Sum_probs=84.7
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.+.+++|+|.|.+|..+++.++.+|+ .|.+++++.++.+.++++|++.+ .+ +.+.+. -.++|+||+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~----l~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEE----VGKIDIIFN 216 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHH----hCCCCEEEE
Confidence 58999999999999999999999999 78889999888888888887532 11 112222 246899999
Q ss_pred cCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEEE
Q 020768 261 CAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYSF 307 (321)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~g 307 (321)
+++..-.-...++.+++++.++.++...+...+ ...-.+++++.+
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALL 261 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEE
Confidence 998644445777889999999999977665554 334556777775
No 135
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.33 E-value=1.7e-06 Score=78.60 Aligned_cols=108 Identities=25% Similarity=0.304 Sum_probs=82.5
Q ss_pred CcEEECCCCCChhhhccchhhHHHHHHHHHcCC----CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHH-HH
Q 020768 147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI----GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SV 221 (321)
Q Consensus 147 ~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~----~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~-~~ 221 (321)
+.++++|+.+..+.++...+.++++.+++.+.. -++.+|+|+|+|.+|..+++.++..|...|++++++.++. ++
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 567788899998888888888888888765433 4789999999999999999999998877888899987764 67
Q ss_pred HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHH
Q 020768 222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267 (321)
Q Consensus 222 ~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 267 (321)
++++|.. ++++ .+ +.+. -...|+||.|++.+..
T Consensus 219 a~~~g~~-~~~~----~~----~~~~----l~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL----DE----LLEL----LNEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH----HH----HHHH----HhcCCEEEECCCCCch
Confidence 8888873 3321 11 2121 1347999999998765
No 136
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.29 E-value=3.4e-08 Score=93.21 Aligned_cols=161 Identities=21% Similarity=0.235 Sum_probs=107.8
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEE---
Q 020768 75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK--- 151 (321)
Q Consensus 75 ~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~--- 151 (321)
..-|.|+++.+.+++.++++ +|++.+.. |++|++| +..|.+.+..|. ..++.|++++.++. .+..
T Consensus 88 ~~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~~t~ 155 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRTETD 155 (417)
T ss_pred hcCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhhhcC
Confidence 46789999999999999877 55555555 8999999 555666555543 46789999988775 2222
Q ss_pred C-CCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe
Q 020768 152 L-PDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN 229 (321)
Q Consensus 152 i-p~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~ 229 (321)
+ +..++...+| .-.+.+.....++++++|+|+|.+|..+++.++..|+..+++++++.++.+ +++++|..
T Consensus 156 i~~~~vSv~~~A-------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~- 227 (417)
T TIGR01035 156 ISAGAVSISSAA-------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE- 227 (417)
T ss_pred CCCCCcCHHHHH-------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-
Confidence 2 2222222111 001123334467899999999999999999999999768889988887744 77778764
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHH
Q 020768 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267 (321)
Q Consensus 230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 267 (321)
.+.. .+ +.+. -.++|+||+|++.+..
T Consensus 228 ~i~~----~~----l~~~----l~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 228 AVKF----ED----LEEY----LAEADIVISSTGAPHP 253 (417)
T ss_pred EeeH----HH----HHHH----HhhCCEEEECCCCCCc
Confidence 2221 11 2121 1368999999987654
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.29 E-value=1.8e-05 Score=73.79 Aligned_cols=101 Identities=20% Similarity=0.286 Sum_probs=78.2
Q ss_pred CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
...|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+ .+.|++
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal--------~~aDVV 254 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA--------KIGDIF 254 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH--------hcCCEE
Confidence 4689999999999999999999999999 688898888887777777763 221 11111 357999
Q ss_pred EEcCCCHHHHHH-HHHHcccCCEEEEEcCCCCCccccchhh
Q 020768 259 FDCAGFNKTMST-ALSATRAGGKVCLVGMGHLEMTVPLTPA 298 (321)
Q Consensus 259 id~~g~~~~~~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 298 (321)
|+++|+...+.. .+..+++++.++.+|... .++|...+
T Consensus 255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~--~eId~~aL 293 (406)
T TIGR00936 255 ITATGNKDVIRGEHFENMKDGAIVANIGHFD--VEIDVKAL 293 (406)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEECCCC--ceeCHHHH
Confidence 999999887774 889999999999999653 34554443
No 138
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.11 E-value=3.2e-06 Score=83.22 Aligned_cols=100 Identities=22% Similarity=0.360 Sum_probs=65.4
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC---------------------hhHHHHHHHcCCCeEEecCCC
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD---------------------DYRLSVAKELGADNIVKVSTN 236 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~---------------------~~~~~~~~~~g~~~vi~~~~~ 236 (321)
..++|++|+|+|+|++|+.+++.++..|+ .|++++.. +++.+.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 47777742 356677889998765542210
Q ss_pred cccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768 237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 285 (321)
.+.. ...+ ..++|+||+++|........+.....+|.+..++
T Consensus 212 -~~~~--~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 212 -EDIT--LEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred -CcCC--HHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 1111 1111 2358999999997543333333334444444443
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.08 E-value=3.9e-05 Score=72.37 Aligned_cols=92 Identities=18% Similarity=0.272 Sum_probs=74.2
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+..+ . ..+.+ ...|+++
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~-------leEal--------~~ADVVI 314 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T-------LEDVV--------SEADIFV 314 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c-------HHHHH--------hhCCEEE
Confidence 579999999999999999999999999 68889888887777777776521 1 11111 2479999
Q ss_pred EcCCCHHHH-HHHHHHcccCCEEEEEcCCC
Q 020768 260 DCAGFNKTM-STALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 260 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 288 (321)
++.|+...+ ...+..+++++.++.+|..+
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 999986654 78999999999999999654
No 140
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.98 E-value=4.5e-05 Score=67.94 Aligned_cols=104 Identities=22% Similarity=0.371 Sum_probs=73.7
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
..+.+++|++||.+|+|. |..++++++..|.. .|++++.+++..+.+++. +.+.+.... .+ +.++.
T Consensus 71 ~~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~- 141 (272)
T PRK11873 71 ALAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALP- 141 (272)
T ss_pred hhccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCC-
Confidence 346789999999999987 88888888887753 699999999998888763 433322111 11 11111
Q ss_pred HhCCCccEEEEcC------CCHHHHHHHHHHcccCCEEEEEcCC
Q 020768 250 AMGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 250 ~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
.....+|+|+... .....++.+.+.|++||++++.+..
T Consensus 142 ~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~ 185 (272)
T PRK11873 142 VADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVV 185 (272)
T ss_pred CCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 1135799998643 2346799999999999999997754
No 141
>PRK08324 short chain dehydrogenase; Validated
Probab=97.98 E-value=7.8e-05 Score=75.08 Aligned_cols=142 Identities=23% Similarity=0.280 Sum_probs=87.3
Q ss_pred CcceeEEEecCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC
Q 020768 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV 214 (321)
Q Consensus 136 G~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~ 214 (321)
-++++|..+++..++.+ +.++.+++.... .......+|+++||+|+ |++|..+++.+...|+ .|+++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r 454 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL 454 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence 45567777777766666 555555544210 00122346899999998 9999999999999999 6888888
Q ss_pred ChhHHHHHH-HcCC--C-eEEecCC-CcccHHHHHHHHHHHhCCCccEEEEcCCC-------------------------
Q 020768 215 DDYRLSVAK-ELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGF------------------------- 264 (321)
Q Consensus 215 ~~~~~~~~~-~~g~--~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~------------------------- 264 (321)
+.++.+.+. +++. . ..+..+- +..+..+.+.+.... .+++|++|+++|.
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 887765543 3443 1 1121111 122233333333222 3579999999982
Q ss_pred HHHHHHHHHHccc---CCEEEEEcCCC
Q 020768 265 NKTMSTALSATRA---GGKVCLVGMGH 288 (321)
Q Consensus 265 ~~~~~~~~~~l~~---~G~~v~~g~~~ 288 (321)
...++.+++.++. +|+++++++..
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 1234455666655 68999998643
No 142
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=9.5e-05 Score=62.25 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=78.4
Q ss_pred HHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH----HHHHcCCCeEEecC-CCcccHHHHH
Q 020768 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADNIVKVS-TNLQDIAEEV 244 (321)
Q Consensus 170 a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~----~~~~~g~~~vi~~~-~~~~~~~~~~ 244 (321)
....++...+++|++||=+|+|. |+.++-+|+..+ .|+.+++.++-.+ .++.+|...+.... +....|.
T Consensus 61 vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~--- 134 (209)
T COG2518 61 VARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWP--- 134 (209)
T ss_pred HHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCC---
Confidence 34456778999999999999755 999999999988 6999999887433 45678886544322 2222211
Q ss_pred HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 285 (321)
...+||.++-+.+.+..-+.+++.|++||+++..=
T Consensus 135 ------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv 169 (209)
T COG2518 135 ------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV 169 (209)
T ss_pred ------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence 13679999998888777789999999999998874
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.88 E-value=0.00021 Score=66.43 Aligned_cols=118 Identities=20% Similarity=0.262 Sum_probs=77.2
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
++.+|+|+|+|.+|+.+++.++.+|+ .|++++++.++.+.+. .++......+. + .+.+.+. -..+|++|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~----~-~~~l~~~----l~~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYS----N-AYEIEDA----VKRADLLI 235 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccC----C-HHHHHHH----HccCCEEE
Confidence 34569999999999999999999999 6888999988877665 45543221111 1 1122222 14689999
Q ss_pred EcC---CC--HH-HHHHHHHHcccCCEEEEEcCC-CCCcccc------chhhhccceEEEEe
Q 020768 260 DCA---GF--NK-TMSTALSATRAGGKVCLVGMG-HLEMTVP------LTPAAARYLIYSFL 308 (321)
Q Consensus 260 d~~---g~--~~-~~~~~~~~l~~~G~~v~~g~~-~~~~~~~------~~~~~~k~~~i~g~ 308 (321)
+|+ +. +. .-...++.+++++.++.++.. ++..+.. .--+...++++.+.
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v 297 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCV 297 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEe
Confidence 997 32 11 136777889999999999854 3332221 11234457777766
No 144
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.0004 Score=61.90 Aligned_cols=106 Identities=15% Similarity=0.232 Sum_probs=69.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEE-ecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+++++|+|+ |++|...++.+...|. .|++++++.++.+.+.+.+...+. |+. +..+..+.+.++.+..++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~-d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYA-EPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCC-CHHHHHHHHHHHHHHcCCCccEE
Confidence 4678999999 9999999999888998 688888888887777665654332 222 22233333444333334579999
Q ss_pred EEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCCC
Q 020768 259 FDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMGH 288 (321)
Q Consensus 259 id~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 288 (321)
|.+.|... ..+.++..+.. .|+++.+++..
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~ 137 (277)
T PRK05993 81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSIL 137 (277)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChh
Confidence 99876310 13345555543 47899998643
No 145
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.80 E-value=2.6e-05 Score=73.92 Aligned_cols=161 Identities=19% Similarity=0.251 Sum_probs=103.1
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCcEEECCC
Q 020768 75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154 (321)
Q Consensus 75 ~~~G~e~vG~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~ip~ 154 (321)
..-|+|+++.+.+++.++++.-+|+.=+ |++|+. -+..|.+.+..+. ..++.|++.+.+ |+
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~----a~~~a~~~g~~g~-~l~~lf~~a~~~--------~k 150 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKD----AYALAQEAGTVGT-ILNRLFQKAFSV--------AK 150 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHH----HHHHHHHcCCchH-HHHHHHHHHHHH--------Hh
Confidence 4679999999999999988755555332 334331 1222333322221 234555554433 34
Q ss_pred CCChhhhccchhhHHHHHHHHHcC----CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe
Q 020768 155 NVSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN 229 (321)
Q Consensus 155 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~ 229 (321)
.+..+.+....+.++++.+++.+. -.++++|+|+|+|.+|.++++.++..|+..+++++++.++.+ +++++|.+
T Consensus 151 ~v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~- 229 (423)
T PRK00045 151 RVRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE- 229 (423)
T ss_pred hHhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-
Confidence 444444444446777777775432 257899999999999999999999999878888889888755 77788864
Q ss_pred EEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHH
Q 020768 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267 (321)
Q Consensus 230 vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 267 (321)
++.+ .+ +.+. -.++|+||+|+|.+..
T Consensus 230 ~~~~----~~----~~~~----l~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 230 AIPL----DE----LPEA----LAEADIVISSTGAPHP 255 (423)
T ss_pred EeeH----HH----HHHH----hccCCEEEECCCCCCc
Confidence 3321 11 1111 1468999999998653
No 146
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.76 E-value=0.0005 Score=61.66 Aligned_cols=110 Identities=17% Similarity=0.152 Sum_probs=78.6
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.|++++|+|.|.+|..++..++.+|+ .|.+.+++.++.+.+.++|...+ . +. .+.+. -...|+||+
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~----l~~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEK----VAEIDIVIN 215 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHH----hccCCEEEE
Confidence 47899999999999999999999998 78888888888777777765421 1 11 12222 246899999
Q ss_pred cCCCHHHHHHHHHHcccCCEEEEEcCCCCCccccchhhhccceEEE
Q 020768 261 CAGFNKTMSTALSATRAGGKVCLVGMGHLEMTVPLTPAAARYLIYS 306 (321)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~k~~~i~ 306 (321)
+++..-.-...++.++++..++.+++..++..+ ...-.++++..
T Consensus 216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~ 259 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKAL 259 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEE
Confidence 997532224567788999899999976665555 34445555544
No 147
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.72 E-value=0.00095 Score=58.68 Aligned_cols=115 Identities=23% Similarity=0.303 Sum_probs=73.9
Q ss_pred CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcC----CC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG----AD-NIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g----~~-~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
..+.+++|+|| +++|...+..+...|. .++.+.++.+|++.+ +++. .. .++..|-.+.+-.+.+.+.....+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 46789999999 9999999999999999 688888999987754 3443 22 244444333333333333222234
Q ss_pred CCccEEEEcCCCHH-------------------------HHHHHHHH-cc-cCCEEEEEcCCCCCccccc
Q 020768 253 TGIDVSFDCAGFNK-------------------------TMSTALSA-TR-AGGKVCLVGMGHLEMTVPL 295 (321)
Q Consensus 253 ~~~d~vid~~g~~~-------------------------~~~~~~~~-l~-~~G~~v~~g~~~~~~~~~~ 295 (321)
..+|+.++++|-.. .-...+.- +. ..|.++.+++..+..+.+.
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~ 152 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY 152 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc
Confidence 57999999998641 11122222 22 2589999998766555443
No 148
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.72 E-value=0.00077 Score=57.06 Aligned_cols=104 Identities=20% Similarity=0.367 Sum_probs=72.7
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcC-CCeEEecCCCcccHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELG-ADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g-~~~vi~~~~~~~~~~~~~~~~ 247 (321)
+.+..+.++++||-+|+|. |.+++++++..+. ..+++++.+++..+.++ .++ .+.+..... +..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~- 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFT- 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhh-
Confidence 4567889999999999988 9999999987642 37999999998887654 456 333332221 22222221
Q ss_pred HHHhCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768 248 QKAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|.||...+. ...+..+.+.|+++|+++...
T Consensus 108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (198)
T PRK00377 108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVIDA 145 (198)
T ss_pred ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEEe
Confidence 23579999986553 346778889999999998643
No 149
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.69 E-value=0.00072 Score=56.75 Aligned_cols=115 Identities=16% Similarity=0.179 Sum_probs=80.2
Q ss_pred CCCEEEEEcC--ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeE-EecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA--GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga--g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
....|||+|+ |++|++.+.-....|+ .|+++.++-++...+. ++|.... +|. +.+++..+...++.+...+..|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence 4568999976 9999998888888899 7999988888877554 7885432 232 2334555555555544467799
Q ss_pred EEEEcCCCHH-------------------------HHHHHH-HHcccCCEEEEEcCCCCCccccchh
Q 020768 257 VSFDCAGFNK-------------------------TMSTAL-SATRAGGKVCLVGMGHLEMTVPLTP 297 (321)
Q Consensus 257 ~vid~~g~~~-------------------------~~~~~~-~~l~~~G~~v~~g~~~~~~~~~~~~ 297 (321)
+.++..|-+= ..++.. .+.+..|+|+.+|+..+-.+++...
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~ 150 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGS 150 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhh
Confidence 9999888641 122222 3457889999999887766766654
No 150
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.69 E-value=0.0014 Score=56.74 Aligned_cols=106 Identities=22% Similarity=0.224 Sum_probs=68.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCeEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADNIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~ 254 (321)
.+++++|+|+ |++|..+++.+...|+ .|+.+++++++.+.+ +++ +.-..+..+-. .....+.+.+... ..++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAK-VLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH-HhCC
Confidence 4689999998 9999999999999999 688888887766544 322 21122222211 1222222222222 1356
Q ss_pred ccEEEEcCCCH-----------------------HHHHHHHHHcccCCEEEEEcCCC
Q 020768 255 IDVSFDCAGFN-----------------------KTMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 255 ~d~vid~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+|.++.+.|.. ..++..+..++++|+++.++...
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 89999988742 12455666777889999998653
No 151
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.60 E-value=0.00046 Score=65.43 Aligned_cols=93 Identities=19% Similarity=0.284 Sum_probs=72.8
Q ss_pred CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+.. . ++. ++. ...|++
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~le----ell----~~ADIV 313 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLE----DVV----ETADIF 313 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHH----HHH----hcCCEE
Confidence 4579999999999999999999999999 6888888777765555566532 1 111 221 358999
Q ss_pred EEcCCCHHHHH-HHHHHcccCCEEEEEcCCC
Q 020768 259 FDCAGFNKTMS-TALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 259 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 288 (321)
+.++|+...+. ..+..+++++.++.+|-..
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 99999877775 8899999999999999653
No 152
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.55 E-value=0.0013 Score=59.82 Aligned_cols=103 Identities=24% Similarity=0.310 Sum_probs=74.1
Q ss_pred HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 020768 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~ 247 (321)
.++...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+..... +..+....
T Consensus 72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~~- 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVPE- 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhcccc-
Confidence 3456778899999999997 59999999998764 25899999988766554 467665443322 22211111
Q ss_pred HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (321)
...+|+|+.+.+........++.|+++|+++..
T Consensus 147 ----~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 147 ----FAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ----cCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 246999999888766777889999999998774
No 153
>PRK06182 short chain dehydrogenase; Validated
Probab=97.54 E-value=0.0023 Score=56.82 Aligned_cols=81 Identities=23% Similarity=0.267 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+.+++|+|+ |++|...++.+...|+ .|++++++.++.+.+.+.+...+ .|.. +..+..+.+.++.+ ..+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~-~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVT-DEASIKAAVDTIIA-EEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCC-CHHHHHHHHHHHHH-hcCCCCEE
Confidence 3678999998 9999999999888998 68888888877765555454332 2322 22333334444433 24579999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.+.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999884
No 154
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.51 E-value=0.0039 Score=53.71 Aligned_cols=110 Identities=23% Similarity=0.287 Sum_probs=72.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC----eEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD----NIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~----~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
.++.++|+|| +++|.++++.+...|+ +++.+.++.+|++.+ .+++.. ..+|.. +.....+.+..+.+ ..+.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVt-D~~~~~~~i~~~~~-~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVT-DRAAVEAAIEALPE-EFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccC-CHHHHHHHHHHHHH-hhCc
Confidence 3577899999 9999999999999999 788888999887755 578831 223332 22333334444433 3567
Q ss_pred ccEEEEcCCCHH-------------------------HHHHHHHHc--ccCCEEEEEcCCCCCccc
Q 020768 255 IDVSFDCAGFNK-------------------------TMSTALSAT--RAGGKVCLVGMGHLEMTV 293 (321)
Q Consensus 255 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~ 293 (321)
+|+.++..|--. ..+..+..+ +..|+++.+|+-.+..+.
T Consensus 82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y 147 (246)
T COG4221 82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY 147 (246)
T ss_pred ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC
Confidence 999999888521 122333332 345899999976554333
No 155
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.48 E-value=0.0016 Score=58.60 Aligned_cols=128 Identities=19% Similarity=0.247 Sum_probs=76.9
Q ss_pred CcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-
Q 020768 147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL- 225 (321)
Q Consensus 147 ~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~- 225 (321)
...+.+.+++.+-..... .-......++. ...++++||-+|+|. |.+++.+++ .|...+++++.++...+.+++.
T Consensus 127 ~~~i~ldpg~aFgtG~h~-tt~l~l~~l~~-~~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~ 202 (288)
T TIGR00406 127 ALIIMLDPGLAFGTGTHP-TTSLCLEWLED-LDLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNA 202 (288)
T ss_pred cEEEEECCCCcccCCCCH-HHHHHHHHHHh-hcCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHH
Confidence 344555555555443221 11111223333 245789999999977 888877665 5777899999999887776642
Q ss_pred ---CCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCC
Q 020768 226 ---GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 226 ---g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
+....+..... + ... ....++|+|+...... ..+..+.+.|+++|.+++.|..
T Consensus 203 ~~n~~~~~~~~~~~--~----~~~---~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 203 ELNQVSDRLQVKLI--Y----LEQ---PIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHcCCCcceEEEec--c----ccc---ccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 22211111000 0 001 1135799999865443 3566778999999999998864
No 156
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.46 E-value=0.0016 Score=53.75 Aligned_cols=104 Identities=21% Similarity=0.304 Sum_probs=74.1
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
-+.++++|+.++=+|+|. |..+++++...-..+++++++++++.+.. ++||.+.+....... .+.+..
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A---p~~L~~---- 99 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA---PEALPD---- 99 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc---hHhhcC----
Confidence 457889999777778754 66677888655555899999999988875 468887665544332 222222
Q ss_pred hCCCccEEEEcCCC--HHHHHHHHHHcccCCEEEEEcCC
Q 020768 251 MGTGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 251 ~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
-..+|.+|-.-|. +..++.++..|+++|+++.-...
T Consensus 100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence 1258999975554 35788999999999999987754
No 157
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0035 Score=55.64 Aligned_cols=79 Identities=22% Similarity=0.280 Sum_probs=54.2
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
+++||+|+ |++|...++.+...|+ .|++++++.++.+.+...+...+ .|+. +..+..+.+..+.+ ..+++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~-~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVN-DGAALARLAEELEA-EHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCC-CHHHHHHHHHHHHH-hcCCCCEEEE
Confidence 47899998 9999999999988998 68888888877776665555433 2332 22333333333322 2357999999
Q ss_pred cCCC
Q 020768 261 CAGF 264 (321)
Q Consensus 261 ~~g~ 264 (321)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 158
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.39 E-value=0.0048 Score=54.75 Aligned_cols=114 Identities=23% Similarity=0.277 Sum_probs=71.8
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCC---CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST---NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~---~~~~~~~~~~~~~~~~ 251 (321)
.|+.|+|+|| +++|..++.-.-..|+. ++.+.+..++++. +++.+... ++.+.- +.++..+.+..+. ..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~-l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~-~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAK-LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI-RH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCc-eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH-Hh
Confidence 5789999999 99999888888888985 5555555555444 44555443 332211 1223333332222 23
Q ss_pred CCCccEEEEcCCCHH-------------------------HHHHHHHHcccC--CEEEEEcCCCCCccccch
Q 020768 252 GTGIDVSFDCAGFNK-------------------------TMSTALSATRAG--GKVCLVGMGHLEMTVPLT 296 (321)
Q Consensus 252 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~~ 296 (321)
-+++|+.+++.|-.. ....++..|++. |+|+.+++..+...+|..
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence 578999999988541 234555666444 999999987776666654
No 159
>PRK12742 oxidoreductase; Provisional
Probab=97.37 E-value=0.0042 Score=53.62 Aligned_cols=102 Identities=21% Similarity=0.277 Sum_probs=61.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.++++||+|+ |++|..+++.+...|++ ++.+. +++++.+ +..+++... +..+- .+.. .+.++.+. .+++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~-~~~D~--~~~~-~~~~~~~~-~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATA-VQTDS--ADRD-AVIDVVRK-SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeE-EecCC--CCHH-HHHHHHHH-hCCCcE
Confidence 4689999998 99999999999999994 55543 3444443 334556543 22222 1222 22222221 356999
Q ss_pred EEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 258 SFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 258 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+|++.|... ....+...++.+|+++.++...
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 999987521 1123445566789999988643
No 160
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.34 E-value=0.0011 Score=52.51 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=62.0
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC--eEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~--~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+.+++|+|+|++|.+++..+...|++.+.++.++.+|.+.+ ++++.. ..+.+++ .. +. -..+|+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~----~~----~~~~Di 78 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LE----EA----LQEADI 78 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HC----HH----HHTESE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HH----HH----HhhCCe
Confidence 588999999999999999999999998899999998876644 566433 2333321 11 11 135899
Q ss_pred EEEcCCCHHH--HHHHHHHccc-CCEEEEEcCC
Q 020768 258 SFDCAGFNKT--MSTALSATRA-GGKVCLVGMG 287 (321)
Q Consensus 258 vid~~g~~~~--~~~~~~~l~~-~G~~v~~g~~ 287 (321)
+|+|++.+.. -...+....+ -+.++.++.+
T Consensus 79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 79 VINATPSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred EEEecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence 9999887532 1122222222 1577777754
No 161
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.33 E-value=0.017 Score=51.95 Aligned_cols=182 Identities=13% Similarity=0.117 Sum_probs=107.4
Q ss_pred EEEEEeCCCCCCCCCCCEEEEcCCccCCCCccccCCCCCCC----CCcccccc----CCCCCcceeEEEecCCcEEECCC
Q 020768 83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEMKFFAT----PPVHGSLANQVVHPADLCFKLPD 154 (321)
Q Consensus 83 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~G~~~~~~~v~~~~~~~ip~ 154 (321)
++|++ +.+..+.+|.||+.+.... .+..+- ++..+.-. ....-.|-+|..+..+..+.-
T Consensus 39 A~Vve--S~~~~i~vGerlyGy~P~a---------shl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~-- 105 (314)
T PF11017_consen 39 ATVVE--SRHPGIAVGERLYGYFPMA---------SHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP-- 105 (314)
T ss_pred EEEEe--eCCCCccCccEEEeecccc---------ceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc--
Confidence 77877 8888999999999863210 000000 01111111 112345666766665443311
Q ss_pred CCChhhhccchhhHHHHHHHHH---cCCCCCCEEEEEcC-ChhHHHHHHHHH-HcCCCeEEEEeCChhHHHHHHHcCC-C
Q 020768 155 NVSLEEGAMCEPLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAR-AFGAPRIVIVDVDDYRLSVAKELGA-D 228 (321)
Q Consensus 155 ~~~~~~aa~~~~~~~a~~~l~~---~~~~~g~~vlI~Ga-g~vG~~a~qla~-~~g~~~vv~v~~~~~~~~~~~~~g~-~ 228 (321)
......+.+-+-+.|+|..-+. .+.-..+.|+|..| +-.++..+..++ ..+...+|++++..+ .++.+.+|+ +
T Consensus 106 ~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N-~~Fve~lg~Yd 184 (314)
T PF11017_consen 106 EREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN-VAFVESLGCYD 184 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc-hhhhhccCCce
Confidence 1111112222445566644332 22333467777888 888888888888 555557888865554 458899995 7
Q ss_pred eEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC-EEEEEcCCCC
Q 020768 229 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGMGHL 289 (321)
Q Consensus 229 ~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~ 289 (321)
.++.|++ +..+ ....--+++|..|+.+....+.+.++..= ..+.+|....
T Consensus 185 ~V~~Yd~--------i~~l---~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 185 EVLTYDD--------IDSL---DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred EEeehhh--------hhhc---cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 7887754 2222 12345799999999998889988888764 4666776543
No 162
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.28 E-value=0.0092 Score=45.81 Aligned_cols=103 Identities=21% Similarity=0.319 Sum_probs=69.0
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
....+.++++++-+|+|. |..+..+++..+...+++++.+++..+.++ .++...+.....+..+ ....
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~---- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE---ALED---- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc---cChh----
Confidence 445677888999999976 888999999875557999999988777654 3444332211111110 0111
Q ss_pred hCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768 251 MGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 251 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|+|+...+. ...++.+.+.|+++|++++-.
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 13479999975533 236888999999999988754
No 163
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.25 E-value=0.0013 Score=56.14 Aligned_cols=104 Identities=23% Similarity=0.281 Sum_probs=69.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHH----HHcCCCeEEecCCC-cccHHHHH
Q 020768 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEV 244 (321)
Q Consensus 171 ~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~----~~~g~~~vi~~~~~-~~~~~~~~ 244 (321)
...++.+.+++|++||-+|+|. |+.++-+++..|.. .|++++..++-.+.+ ++++.+.+.....+ ...+
T Consensus 62 a~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~---- 136 (209)
T PF01135_consen 62 ARMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW---- 136 (209)
T ss_dssp HHHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT----
T ss_pred HHHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc----
Confidence 3456778899999999998754 88888888887653 488899887654444 45666543322211 1111
Q ss_pred HHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (321)
Q Consensus 245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (321)
....+||.++-+.+-++.-...++.|++||+++..
T Consensus 137 -----~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 137 -----PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp -----GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred -----ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 11357999999888877778899999999999985
No 164
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.22 E-value=0.0033 Score=52.58 Aligned_cols=82 Identities=23% Similarity=0.335 Sum_probs=58.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC---CeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
-|.+|||+|+ +++|+..++-...+|- .||++.+++++++.++...+ ..+.|..+ .+-.+.+.++........+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d--~~~~~~lvewLkk~~P~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD--RDSRRELVEWLKKEYPNLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc--hhhHHHHHHHHHhhCCchh
Confidence 4789999976 9999999888888997 79999999999998887553 23333322 3333344444443456689
Q ss_pred EEEEcCCCH
Q 020768 257 VSFDCAGFN 265 (321)
Q Consensus 257 ~vid~~g~~ 265 (321)
+++++.|-.
T Consensus 81 vliNNAGIq 89 (245)
T COG3967 81 VLINNAGIQ 89 (245)
T ss_pred eeeeccccc
Confidence 999998854
No 165
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.18 E-value=0.01 Score=50.76 Aligned_cols=103 Identities=18% Similarity=0.230 Sum_probs=69.5
Q ss_pred HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 020768 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~ 247 (321)
.++...++++++||-+|+|. |..+..+++..+. ..|++++.+++-.+.+++ .|...+.....+ .... +
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd---~~~~---~ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGD---GTLG---Y 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC---cccC---C
Confidence 34667889999999998754 7777777877653 379999999887766653 454332211111 1000 0
Q ss_pred HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (321)
.....+|+|+-........+.+.+.|++||+++..
T Consensus 141 --~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred --CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 01357999987655566778889999999998875
No 166
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.15 E-value=0.012 Score=56.29 Aligned_cols=104 Identities=23% Similarity=0.304 Sum_probs=63.8
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh--hH-HHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YR-LSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~--~~-~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
++.++||+|+ |++|...++.+...|+ ++++++.+. ++ .+..++++...+ .|.. +..+..+.+..+.+ ..+++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~-~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDIT-APDAPARIAEHLAE-RHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHHHH-hCCCC
Confidence 5789999998 9999999999999999 577776642 22 233345664332 2322 12222333333322 23479
Q ss_pred cEEEEcCCC----------HHHHHHHHH-----------------HcccCCEEEEEcCC
Q 020768 256 DVSFDCAGF----------NKTMSTALS-----------------ATRAGGKVCLVGMG 287 (321)
Q Consensus 256 d~vid~~g~----------~~~~~~~~~-----------------~l~~~G~~v~~g~~ 287 (321)
|++|.+.|. .+.++..++ .++++|+++++++.
T Consensus 286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~ 344 (450)
T PRK08261 286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSI 344 (450)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECCh
Confidence 999999983 223333332 45677999999853
No 167
>PRK08017 oxidoreductase; Provisional
Probab=97.15 E-value=0.0046 Score=54.08 Aligned_cols=80 Identities=21% Similarity=0.338 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEE-ecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
++++|+|+ |++|...++.+...|. .|+++.++.++.+.+++.++..+. |.. +..+..+.+..+....+..+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLD-DPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecC-CHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999999 9999999999999998 688888888888877777765432 221 1222222233332222457899998
Q ss_pred cCCC
Q 020768 261 CAGF 264 (321)
Q Consensus 261 ~~g~ 264 (321)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8773
No 168
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.14 E-value=0.0067 Score=56.76 Aligned_cols=99 Identities=21% Similarity=0.277 Sum_probs=70.2
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
+...+++|++||-+|+| .|.++..+++..|+ .|++++.+++..+.+++......+.... .++. ++ .+.
T Consensus 161 ~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~~----~l----~~~ 228 (383)
T PRK11705 161 RKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDYR----DL----NGQ 228 (383)
T ss_pred HHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cchh----hc----CCC
Confidence 66788999999999984 57778888988888 7999999999999888643221111111 1221 11 356
Q ss_pred ccEEEEc-----CCC---HHHHHHHHHHcccCCEEEEEc
Q 020768 255 IDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 255 ~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 285 (321)
+|.|+.. +|. ...++.+.+.|+|+|.+++..
T Consensus 229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 8998743 343 356788889999999998864
No 169
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.13 E-value=0.012 Score=49.25 Aligned_cols=104 Identities=18% Similarity=0.279 Sum_probs=62.1
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
..+++|++||.+|+|.-++......+..+...+++++.++++ ...++. ++..+....+..+.+.+. ....++|
T Consensus 28 ~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~--~~~~~~D 100 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRER--VGDDKVD 100 (188)
T ss_pred cccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHH--hCCCCcc
Confidence 567999999999997655544443344344479999998764 112332 222111111222222221 1245799
Q ss_pred EEEEcC-----CC------------HHHHHHHHHHcccCCEEEEEcCC
Q 020768 257 VSFDCA-----GF------------NKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 257 ~vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
+|+... |. ...+..+.++|+++|++++....
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~~ 148 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVFQ 148 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEcc
Confidence 999521 21 35678889999999999986543
No 170
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.13 E-value=0.02 Score=50.77 Aligned_cols=118 Identities=19% Similarity=0.342 Sum_probs=77.5
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
+++++++||++||=+|+|- |-+++..|+..|. +|++++-|++..+.++ +.|...-+.. ...++. .+
T Consensus 65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v--~l~d~r----d~-- 134 (283)
T COG2230 65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEV--RLQDYR----DF-- 134 (283)
T ss_pred HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEE--Eecccc----cc--
Confidence 4779999999999999865 6777888999998 7999999988776654 4665411111 001111 11
Q ss_pred HhCCCccEEEE-----cCCC---HHHHHHHHHHcccCCEEEEEcCCCCCccc-cchhhhccce
Q 020768 250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVGMGHLEMTV-PLTPAAARYL 303 (321)
Q Consensus 250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~k~~ 303 (321)
...||-|+. .+|. ++.|..+.+.|+++|++++........+. ....++.+.|
T Consensus 135 --~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~~~~~~~~~~i~~yi 195 (283)
T COG2230 135 --EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPDQEFRRFPDFIDKYI 195 (283)
T ss_pred --ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCCcccccchHHHHHhC
Confidence 223777664 3443 35688899999999999988865543222 3333444443
No 171
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.017 Score=49.69 Aligned_cols=81 Identities=21% Similarity=0.212 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHH---HcCCCeE-EecCCCcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAK---ELGADNI-VKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~---~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
++.++||+|+ |.+|..+++.+...|+ .|+.++++.++.+ .++ ..+...+ .|.. +..+..+.+.++.+. .++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLV-DPQAARRAVDEVNRQ-FGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecC-CHHHHHHHHHHHHHH-hCC
Confidence 3789999998 9999999999888899 5888877665432 222 2233221 1221 122333333333222 347
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|+++.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998874
No 172
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.023 Score=50.34 Aligned_cols=81 Identities=28% Similarity=0.294 Sum_probs=52.7
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
+.++||+|+ |++|...++.+...|+ .|+++++++++.+.+ ++++....+..+- +.+++.+.+..+.+. .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEAD-LGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 578999999 9999999988888899 577777887776543 4454222222221 223333334444332 3579999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.+.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999874
No 173
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.017 Score=49.83 Aligned_cols=82 Identities=27% Similarity=0.284 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC-C--eEEecC-CCcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA-D--NIVKVS-TNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~-~--~vi~~~-~~~~~~~~~~~~~~~~~~~~ 254 (321)
.+.+++|+|+ |.+|...++.+...|+ .|+++++++++...+ +++.. . ..+..+ .+..++.+.+.++.+. .++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 4688999998 9999999998888898 588888777665433 33421 1 122212 1222333334343322 347
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 174
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.04 E-value=0.01 Score=57.76 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=38.2
Q ss_pred HHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH
Q 020768 175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 221 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~ 221 (321)
+..+.+.|+++||+|+ |.+|..+++.+...|+ .|+++.++.++.+.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~ 119 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES 119 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 4567789999999999 9999999999988998 57777787776543
No 175
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.02 E-value=0.013 Score=48.50 Aligned_cols=93 Identities=18% Similarity=0.254 Sum_probs=63.5
Q ss_pred EEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768 185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (321)
Q Consensus 185 vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 263 (321)
|+|+|+ |.+|...++.+...|. .|.++.+++++.+. ..+++ ++..+- .+. +.+.+. -.++|.||.+.|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~a----l~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAA----LKGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHH----HTTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhh----hhhcchhhhhhh
Confidence 789999 9999999999999997 68888888887766 33333 333222 222 223222 147999999998
Q ss_pred C----HHHHHHHHHHcccCC--EEEEEcCCC
Q 020768 264 F----NKTMSTALSATRAGG--KVCLVGMGH 288 (321)
Q Consensus 264 ~----~~~~~~~~~~l~~~G--~~v~~g~~~ 288 (321)
. ......+++.++..| +++.++..+
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred hhcccccccccccccccccccccceeeeccc
Confidence 4 344566677765554 788777543
No 176
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.027 Score=49.61 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H---cCCC-eEEecCCCc-ccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E---LGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~---~g~~-~vi~~~~~~-~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...++.+...|+ .|++++++.++.+.+. . .+.. ..+..+-.+ ....+.+.++.+. .+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-FG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 4789999998 9999999999999999 6888888776654332 2 2322 222222222 2222233333222 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 177
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.99 E-value=0.025 Score=50.28 Aligned_cols=106 Identities=20% Similarity=0.268 Sum_probs=63.7
Q ss_pred CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHH---H-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRL---S-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~---~-~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.++++||+|+ + ++|...++.+...|+ +|+.+.++++.. + ..+++|....+..+- +.++..+.+.++.+. .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-W 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-h
Confidence 4688999998 4 899999999999999 566666654322 2 223445433222221 222333334443332 3
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 253 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 253 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+.+|++|++.|.. + ..+.++..+..+|+++.++...
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~ 148 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG 148 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence 5799999998831 0 1233445566679999887543
No 178
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.023 Score=50.22 Aligned_cols=105 Identities=14% Similarity=0.175 Sum_probs=65.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GAD-NIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~-~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.|+++||+|+ +++|...++.+...|+ +|+.++++.++.+.+. ++ +.. ..+..+- +..+..+.+.++.+ .
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN--I 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--h
Confidence 4788999998 9999999999999999 5777888876654332 22 322 1222221 22233333444322 3
Q ss_pred CCccEEEEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCCC
Q 020768 253 TGIDVSFDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMGH 288 (321)
Q Consensus 253 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~ 288 (321)
+++|+++.+.|... ..+.++..+.. .|+++.++...
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~ 146 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVA 146 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence 56999999987421 13445555533 48999998653
No 179
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.98 E-value=0.0058 Score=50.79 Aligned_cols=88 Identities=22% Similarity=0.236 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.+..+.....+... .++.+.+. ..|+|+.
T Consensus 35 ~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell~--------~aDiv~~ 97 (178)
T PF02826_consen 35 RGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELLA--------QADIVSL 97 (178)
T ss_dssp TTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHHH--------H-SEEEE
T ss_pred CCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhcc--------hhhhhhh
Confidence 58899999999999999999999999 7999988887766455555421 12222222 2688888
Q ss_pred cCCCHH----H-HHHHHHHcccCCEEEEEc
Q 020768 261 CAGFNK----T-MSTALSATRAGGKVCLVG 285 (321)
Q Consensus 261 ~~g~~~----~-~~~~~~~l~~~G~~v~~g 285 (321)
+..... . =...+..++++..++.++
T Consensus 98 ~~plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 98 HLPLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp -SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred hhccccccceeeeeeeeeccccceEEEecc
Confidence 777321 1 236678889888888887
No 180
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.03 Score=48.63 Aligned_cols=104 Identities=22% Similarity=0.231 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh-hHHH-H---HHHcCCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLS-V---AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~-~~~~-~---~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.+.++||+|+ |++|...+..+...|. .|+++.++. ++.+ . ++..+.. ..+..+- +.++..+.+.++.+ ..
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE-EF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hC
Confidence 4678999998 9999999998888998 566665543 2222 2 2222322 1222121 12223333333322 13
Q ss_pred CCccEEEEcCCCH-------------------HHHHHHHHHcccCCEEEEEcC
Q 020768 253 TGIDVSFDCAGFN-------------------KTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 253 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 286 (321)
+++|+++.+.|.. ..++.+...+..+|+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 4789999887642 234555666666789998875
No 181
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.023 Score=52.13 Aligned_cols=107 Identities=20% Similarity=0.253 Sum_probs=65.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE-EecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI-VKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|..+++.+...|+ .|+.+++++++.+.+ ++.|.... +..+- +..+..+.+..+.+. .+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~-~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE-LG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-CC
Confidence 4678999998 9999999999999999 577777877665432 23454322 22121 122333333333222 35
Q ss_pred CccEEEEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCCCC
Q 020768 254 GIDVSFDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMGHL 289 (321)
Q Consensus 254 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 289 (321)
++|++|++.|... ..+.++..+.+ .|+++.+++...
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 7999999988421 12234555544 589999986543
No 182
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.94 E-value=0.018 Score=49.34 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=68.7
Q ss_pred HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 020768 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~ 247 (321)
.++...++++++||=+|+|. |..++.+++..+. ..|++++.+++..+.++ ++|.+.+..... +..+...
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~~-- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGWE-- 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCCc--
Confidence 34667789999999998754 6666777777543 25999999988776654 455543322211 1111100
Q ss_pred HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 285 (321)
....||+|+-..........+.+.|+++|+++..-
T Consensus 143 ---~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 143 ---PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred ---ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 12479998866555566778889999999988753
No 183
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.028 Score=49.94 Aligned_cols=82 Identities=22% Similarity=0.192 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe--EEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vi~~~~~-~~~~~~~~~~~~~~~~~~~d 256 (321)
.++++||+|+ |++|...++.+...|. .|++++++.++.+.+.+..... .+..+-. .....+.+....+. .+++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4678999998 9999999999888998 6888888887766555432221 1221111 12223333333221 34699
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
+++.+.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999885
No 184
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.028 Score=49.50 Aligned_cols=105 Identities=22% Similarity=0.237 Sum_probs=65.7
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
.+.+++|+|+ +++|...+..+...|+ .|+.++++.++.+ ..++++... .+..+- +..+..+.+.++.+. .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4679999998 9999999999999999 6888888776544 344555321 222211 222333334443332 35699
Q ss_pred EEEEcCCCH---------H---------------HHHHHHHHc-ccCCEEEEEcCC
Q 020768 257 VSFDCAGFN---------K---------------TMSTALSAT-RAGGKVCLVGMG 287 (321)
Q Consensus 257 ~vid~~g~~---------~---------------~~~~~~~~l-~~~G~~v~~g~~ 287 (321)
++|.+.|.. + ..+.+...+ +.+|+++.++..
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~ 138 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSI 138 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECch
Confidence 999998741 0 122333444 567999999854
No 185
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.91 E-value=0.0075 Score=45.58 Aligned_cols=93 Identities=28% Similarity=0.378 Sum_probs=62.7
Q ss_pred CCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHHHH-c---CC-CeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKE-L---GA-DNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~~~-~---g~-~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
||.+||-+|+|. |..++.+++. .+. ++++++.+++..+.+++ . +. +.+.... .++ ... .....+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~~~----~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-EFD----PDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-HGG----TTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-ccC----cccCCC
Confidence 688999999865 7777788885 565 79999999998888764 2 22 2222211 122 100 112457
Q ss_pred ccEEEEcC-CC---H------HHHHHHHHHcccCCEEEE
Q 020768 255 IDVSFDCA-GF---N------KTMSTALSATRAGGKVCL 283 (321)
Q Consensus 255 ~d~vid~~-g~---~------~~~~~~~~~l~~~G~~v~ 283 (321)
+|+|+... .. . ..++.+.+.|+++|++++
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 99999876 21 1 237889999999999876
No 186
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.91 E-value=0.0026 Score=56.58 Aligned_cols=100 Identities=21% Similarity=0.379 Sum_probs=61.5
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
++++++++|++||-+|+| -|-+++.+|+..|+ .|.+++.+++..++++ +.|....+.+.. .|+. ++
T Consensus 55 ~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~~----~~-- 124 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDYR----DL-- 124 (273)
T ss_dssp HTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-GG----G---
T ss_pred HHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eecc----cc--
Confidence 467899999999999987 46777788898899 7999999988877764 456432111111 1221 11
Q ss_pred HhCCCccEEEE-----cCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768 250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g 285 (321)
...+|.|+. .+|. +..++.+.+.|+|+|++++-.
T Consensus 125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 237898875 3442 246889999999999997544
No 187
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.91 E-value=0.016 Score=49.29 Aligned_cols=103 Identities=18% Similarity=0.205 Sum_probs=67.9
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~~~~~~~~~~~~~ 247 (321)
++...++++++||=+|+|. |..+..+++..+ ...|++++.+++-.+.++ +.+... +..... +..+.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~---d~~~~~~-- 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG---DGKRGLE-- 138 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC---CcccCCc--
Confidence 4667788999999998854 777777777764 237999999988666554 345432 211111 1111110
Q ss_pred HHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|.|+-+.......+.+.+.|++||+++..-
T Consensus 139 ---~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 139 ---KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred ---cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 13579999977665566678889999999997743
No 188
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.03 Score=48.58 Aligned_cols=82 Identities=15% Similarity=0.126 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCC-eEEecCCCc-ccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~-~vi~~~~~~-~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...+..+...|+ .++++++++++.+.. + ..+.. .++..+-.+ .+..+.+.++.+ ..+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA-ALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 4689999998 9999999999988998 577777776654432 2 22322 122222221 222222222222 135
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 189
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.90 E-value=0.04 Score=48.51 Aligned_cols=82 Identities=17% Similarity=0.226 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.|++++|+|+ + ++|...++.+...|+ .|+.+.++++..+.+ ++.|....+..+- +..+..+.+.++.+. .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK-W 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH-c
Confidence 4688999998 4 799999888888899 566666653222222 2334333222221 223333334443332 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+.+|+++++.|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 569999998873
No 190
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.022 Score=50.01 Aligned_cols=81 Identities=27% Similarity=0.353 Sum_probs=51.1
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcC-CC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELG-AD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g-~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
+++||+|+ |++|...++.+...|+ .|++++++.++.+.+. .++ .. .++..+- +..+..+.+..+.....+++|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 47999998 9999999998888998 6888888877665443 333 11 1222111 1223333333332222467999
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
++.+.|.
T Consensus 81 vi~~ag~ 87 (260)
T PRK08267 81 LFNNAGI 87 (260)
T ss_pred EEECCCC
Confidence 9999885
No 191
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.89 E-value=0.016 Score=53.87 Aligned_cols=100 Identities=16% Similarity=0.208 Sum_probs=66.3
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC---CCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
.+|||+|+|.+|..+++.+...+...|.+.+++.++.+.+.... ... +.++-. + .+.+.++. .++|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~-~~vD~~--d-~~al~~li----~~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEA-LQVDAA--D-VDALVALI----KDFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcccccee-EEeccc--C-hHHHHHHH----hcCCEEE
Confidence 57999999999999999988888557999999988888876654 222 222211 1 22233332 3459999
Q ss_pred EcCCCHHHHHHHHHHcccCCEEEEEcCCCCC
Q 020768 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHLE 290 (321)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 290 (321)
++.+........-.+++.+=.++........
T Consensus 74 n~~p~~~~~~i~ka~i~~gv~yvDts~~~~~ 104 (389)
T COG1748 74 NAAPPFVDLTILKACIKTGVDYVDTSYYEEP 104 (389)
T ss_pred EeCCchhhHHHHHHHHHhCCCEEEcccCCch
Confidence 9999765554444556666667766655433
No 192
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.88 E-value=0.04 Score=49.04 Aligned_cols=106 Identities=19% Similarity=0.253 Sum_probs=65.8
Q ss_pred CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChh---HHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~---~~~-~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.++++||+|+ +++|..+++.+...|+ .|+.++++.+ +.+ ..++++....+..+- +.++..+.+.++.+. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence 4789999987 4899999998888999 5777766642 222 234455433332222 122333334443332 3
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 253 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 253 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+.+|++|++.|.. + ..+.++..+..+|+++.++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 5799999999841 0 2345666777789999987543
No 193
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.87 E-value=0.039 Score=48.55 Aligned_cols=106 Identities=17% Similarity=0.222 Sum_probs=64.3
Q ss_pred CCCEEEEEcCC---hhHHHHHHHHHHcCCCeEEEEeCChhHH----HHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGAG---PIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Gag---~vG~~a~qla~~~g~~~vv~v~~~~~~~----~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.|+++||+|++ ++|..+++.+...|+ .|+.++++.+.. +..++++....+..+- +.++..+.+.++.+. .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE-W 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH-c
Confidence 47899999873 899999998888999 566666664332 2233444323333222 222333333443332 3
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 253 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 253 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+.+|+++.+.|-. + ..+.++..++.+|+++.++...
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 5799999998731 1 1344566677789998887543
No 194
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.86 E-value=0.015 Score=52.77 Aligned_cols=92 Identities=25% Similarity=0.294 Sum_probs=63.4
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 261 (321)
.+|.|+|+|.+|...+..++..|. ..|++.++++++.+.+++.|...... .+.. +. -...|+||.|
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~----~~----~~~aDvViia 73 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAA----EA----VKGADLVILC 73 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHH----HH----hcCCCEEEEC
Confidence 579999999999999998888875 36888899998888888887532111 1111 11 1357999999
Q ss_pred CCCHHH---HHHHHHHcccCCEEEEEcCC
Q 020768 262 AGFNKT---MSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 262 ~g~~~~---~~~~~~~l~~~G~~v~~g~~ 287 (321)
+..... +..+...++++..++.+|..
T Consensus 74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 74 VPVGASGAVAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEeCccc
Confidence 986432 33344556777777776653
No 195
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.014 Score=53.59 Aligned_cols=82 Identities=27% Similarity=0.375 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ ++.|.+. ++..+- +.++..+.+.++.+ ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence 4689999999 9999999999999999 577888887776433 3445443 222111 12233333333322 235
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999984
No 196
>PRK14967 putative methyltransferase; Provisional
Probab=96.83 E-value=0.0069 Score=52.26 Aligned_cols=100 Identities=26% Similarity=0.318 Sum_probs=66.6
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
+....++++++||-.|+|. |..++.+++. +...+++++.+++..+.+++ .+....+. . .++.+.+
T Consensus 29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~-~---~d~~~~~----- 97 (223)
T PRK14967 29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR-R---GDWARAV----- 97 (223)
T ss_pred HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE-E---Cchhhhc-----
Confidence 4455678899999999977 8888888875 55579999999988776553 34322111 1 2222211
Q ss_pred HhCCCccEEEEcCC---C------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768 250 AMGTGIDVSFDCAG---F------------------------NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 250 ~~~~~~d~vid~~g---~------------------------~~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|+|+...+ . ...+..+.+.|+++|+++++-
T Consensus 98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 1357999997521 0 124566789999999999864
No 197
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=96.81 E-value=0.00031 Score=54.75 Aligned_cols=50 Identities=30% Similarity=0.489 Sum_probs=35.6
Q ss_pred cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC--CHHHHHHHHHHcccCCEEEEEcC
Q 020768 225 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--FNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 225 ~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
||++++++|+. .++ ....++|+|||++| .+..+..++++| ++|+++.++.
T Consensus 1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence 68999999863 333 23678999999999 655557777888 9999999984
No 198
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.026 Score=50.83 Aligned_cols=81 Identities=31% Similarity=0.451 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCC-eE----EecCCCcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NI----VKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~-~v----i~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
.|+++||+|+ |++|..+++.+...|+ .|++++++.++.+. .++++.. .+ .|.. +..+..+.+.++.+. .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~-~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVT-DLAAMQAAAEEAVER-FG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCC-CHHHHHHHHHHHHHH-cC
Confidence 4789999998 9999999999999999 68888888776554 3455521 12 2222 222333333443332 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999985
No 199
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.79 E-value=0.05 Score=49.78 Aligned_cols=107 Identities=11% Similarity=0.105 Sum_probs=71.7
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHH-HHcCCCeEEEEeCChhHHHH-HHHc----CCCeEEecCCCcccHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGA-RAFGAPRIVIVDVDDYRLSV-AKEL----GADNIVKVSTNLQDIAEEVEKIQ 248 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla-~~~g~~~vv~v~~~~~~~~~-~~~~----g~~~vi~~~~~~~~~~~~~~~~~ 248 (321)
+...-+...+++|+|+|..+...+..+ ...+++.|.+.++++++.+. ++++ +... ..++ +..+.+
T Consensus 120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~----~~~~~~---- 190 (325)
T PRK08618 120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVN----SADEAI---- 190 (325)
T ss_pred HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeC----CHHHHH----
Confidence 444445678899999999998776544 46788889999998877653 3333 4332 2221 222222
Q ss_pred HHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT 296 (321)
Q Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 296 (321)
...|+|+.|+++...+- . ..+++|-+++.+|...+ ..++|..
T Consensus 191 ----~~aDiVi~aT~s~~p~i-~-~~l~~G~hV~~iGs~~p~~~E~~~~ 233 (325)
T PRK08618 191 ----EEADIIVTVTNAKTPVF-S-EKLKKGVHINAVGSFMPDMQELPSE 233 (325)
T ss_pred ----hcCCEEEEccCCCCcch-H-HhcCCCcEEEecCCCCcccccCCHH
Confidence 35899999999864433 3 89999999999997644 4566653
No 200
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.79 E-value=0.032 Score=45.29 Aligned_cols=102 Identities=17% Similarity=0.268 Sum_probs=68.0
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+-.|.+++|.|=|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|... .. +.+. -...|+
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-----------~~~a----~~~adi 81 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-----------LEEA----LRDADI 81 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHH----TTT-SE
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-----------HHHH----HhhCCE
Confidence 45689999999999999999999999999 7999999998877777767642 11 1121 245799
Q ss_pred EEEcCCCHHHH-HHHHHHcccCCEEEEEcCCCCCccccchhh
Q 020768 258 SFDCAGFNKTM-STALSATRAGGKVCLVGMGHLEMTVPLTPA 298 (321)
Q Consensus 258 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 298 (321)
+|.++|+...+ ..-+..|+++.-+..+|... .++++..+
T Consensus 82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d--~Eid~~~L 121 (162)
T PF00670_consen 82 FVTATGNKDVITGEHFRQMKDGAILANAGHFD--VEIDVDAL 121 (162)
T ss_dssp EEE-SSSSSSB-HHHHHHS-TTEEEEESSSST--TSBTHHHH
T ss_pred EEECCCCccccCHHHHHHhcCCeEEeccCcCc--eeEeeccc
Confidence 99999986543 47788899888888888544 45555443
No 201
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.048 Score=47.32 Aligned_cols=82 Identities=26% Similarity=0.324 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
++.+++|+|+ |++|...++.+...|+ .++.++++.++.+. .++++... .+..+- +..+..+.+..+.+ ..+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence 4679999998 9999999999999999 67888777665543 34555432 122111 11222222333322 235799
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
No 202
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.76 E-value=0.058 Score=46.81 Aligned_cols=82 Identities=21% Similarity=0.206 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcC--CC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG--AD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g--~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
.+.++||+|+ |++|...++.+...|. .|++++++.++.+.+ ..+. .. ..+..+- +..++.+.+.+.... ...
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 4678999998 9999999998888899 588888887665543 3332 11 1122111 122333333333222 357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 203
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.019 Score=50.30 Aligned_cols=81 Identities=25% Similarity=0.338 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.|++++|+|+ |++|...++.+...|+ .|+++++++.+.+.. .+++.. .+..+- +..+..+.+.++.+. .+++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAET-YGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4789999999 9999999999999998 677777777665433 445443 222221 122333333333222 357999
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
++.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 204
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.75 E-value=0.044 Score=48.02 Aligned_cols=107 Identities=14% Similarity=0.173 Sum_probs=65.0
Q ss_pred CCCEEEEEcCC---hhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe--EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGAG---PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Gag---~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
.|++++|+|++ ++|...++.+...|+ +|+.+.++++..+.++++.... .+..+- +.++..+.+.++.+. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hCC
Confidence 57899999874 899999999988999 5777766644444444443221 222111 122333333443332 356
Q ss_pred ccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768 255 IDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 255 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
+|+++++.|... ..+.++..++.+|+++.++....
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 147 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS 147 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence 999999887310 13344566777899988875443
No 205
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.028 Score=49.49 Aligned_cols=81 Identities=25% Similarity=0.325 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc--CCC-eEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL--GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~--g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~ 254 (321)
++.++||+|+ |++|...+..+...|+ .|+++++++++.+.+. ++ +.. ..+..+-. ..+..+....+.+ .++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 4678999998 9999999998888998 5888888877665443 22 211 12221111 1222222222222 357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|+++.+.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 206
>PRK04148 hypothetical protein; Provisional
Probab=96.72 E-value=0.051 Score=42.69 Aligned_cols=113 Identities=13% Similarity=0.142 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
..+.+++++|.| .|...+..+...|. .|+++|.+++..+.+++.+.+.+.+.-. +.++ . + -.++|++.
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~----~-~----y~~a~liy 82 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL----E-I----YKNAKLIY 82 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH----H-H----HhcCCEEE
Confidence 456889999999 88755555667898 7999999999999999988765543111 1111 1 1 25789999
Q ss_pred EcCCCHHHHHHHHHHcccC-CEEEEEcCCCCCccccchhhhccceE
Q 020768 260 DCAGFNKTMSTALSATRAG-GKVCLVGMGHLEMTVPLTPAAARYLI 304 (321)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~k~~~ 304 (321)
..-..++..+.+++.-+.- ..++..-..+.....++...-+|+..
T Consensus 83 sirpp~el~~~~~~la~~~~~~~~i~~l~~e~~~~~~kl~ny~~~~ 128 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKINVPLIIKPLSGEEPIKELKLINYKGKP 128 (134)
T ss_pred EeCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCcceEEEecCCeE
Confidence 9999888877888776554 45555554444333333333344443
No 207
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.06 Score=47.66 Aligned_cols=78 Identities=27% Similarity=0.387 Sum_probs=48.2
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeE----EecCCCcccHHHHHHHHHHHhCCC
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNI----VKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v----i~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
+++|+|+ |++|...++.+...|+ .|+.+++++++.+.. +..+...+ .|..+ ..+..+...++.. ..++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~-~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHA-AHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHH-hcCC
Confidence 6899998 9999999999888998 577777776654332 22333221 23221 1222222333322 2357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999974
No 208
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.066 Score=47.21 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
++.++||+|+ |++|...++.+...|+ .|+.+++++++.+.. + +.+.. ..+..+-. ..+..+.+.+.... .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 5789999998 9999999999889999 588887776554322 2 22322 12222221 22233333333222 35
Q ss_pred CccEEEEcCC
Q 020768 254 GIDVSFDCAG 263 (321)
Q Consensus 254 ~~d~vid~~g 263 (321)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998876
No 209
>PRK06484 short chain dehydrogenase; Validated
Probab=96.69 E-value=0.05 Score=53.03 Aligned_cols=107 Identities=22% Similarity=0.253 Sum_probs=69.3
Q ss_pred CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
..|+++||+|+ +++|...++.+...|+ .|+.++++.++.+.+. +++... .+..+- +.++..+.+.++.+. .+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR-WGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence 35778999998 9999999999999998 6888888877766554 455432 122221 122333334443322 3579
Q ss_pred cEEEEcCCCHH--------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 256 DVSFDCAGFNK--------------------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 256 d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
|++|.+.|... ..+.++..++.+|+++.+++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99999987420 1344455666779999998653
No 210
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.67 E-value=0.032 Score=47.40 Aligned_cols=95 Identities=31% Similarity=0.338 Sum_probs=57.3
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hHH----HHHHHcCCCeEEecCCCc
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRL----SVAKELGADNIVKVSTNL 237 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~~----~~~~~~g~~~vi~~~~~~ 237 (321)
...+|+|.|+|++|..+++.+...|...+..+|.+. .|. +.++++....-+......
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 357899999999999999999999998888888661 122 223344433222111111
Q ss_pred ccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768 238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280 (321)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 280 (321)
-+ .+.+.++ -.++|+||+|..+...-..+-+.+...+.
T Consensus 100 i~-~~~~~~~----~~~~D~Vi~~~d~~~~r~~l~~~~~~~~i 137 (202)
T TIGR02356 100 VT-AENLELL----INNVDLVLDCTDNFATRYLINDACVALGT 137 (202)
T ss_pred CC-HHHHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 11 1122222 25699999999886554444455444444
No 211
>PRK09186 flagellin modification protein A; Provisional
Probab=96.67 E-value=0.063 Score=46.80 Aligned_cols=81 Identities=23% Similarity=0.348 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc----CCCe--EEecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN--IVKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~--vi~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.+.++||+|+ |++|...+..+...|+ .|+.+.+++++.+.+ +++ +... ++..+- +..+..+.+.++.+.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~- 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK- 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH-
Confidence 4789999998 9999999999999999 577777776665433 233 2221 112121 222333344443332
Q ss_pred CCCccEEEEcCC
Q 020768 252 GTGIDVSFDCAG 263 (321)
Q Consensus 252 ~~~~d~vid~~g 263 (321)
.+++|++|.+.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 356999999985
No 212
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.021 Score=49.44 Aligned_cols=78 Identities=24% Similarity=0.358 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+.+++|+|+ |++|...++.+...|. .|++++++.++.+.+ ++.+.. .+..+-. +. +.+.+..+. ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~--~~-~~v~~~~~~-~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVG--DD-AAIRAALAA-AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCC--CH-HHHHHHHHH-hCCCCEE
Confidence 4679999998 9999999999999998 588888887766544 344543 2322222 21 123333222 3578999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.+.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 999984
No 213
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.074 Score=46.75 Aligned_cols=82 Identities=23% Similarity=0.313 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCCeE--EecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GADNI--VKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~v--i~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.+.+++|+|+ +++|...++.+...|+ +|+.+++++++.+.+. ++ +...+ +..+- +..+..+.+.++.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~- 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR- 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 4689999998 9999999999999999 5778888776654332 11 11122 21111 122333333333322
Q ss_pred CCCccEEEEcCCC
Q 020768 252 GTGIDVSFDCAGF 264 (321)
Q Consensus 252 ~~~~d~vid~~g~ 264 (321)
.+++|++|.++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 3569999999984
No 214
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.62 E-value=0.084 Score=46.89 Aligned_cols=107 Identities=22% Similarity=0.232 Sum_probs=64.1
Q ss_pred CCCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCCh---hHHH-HHHHcCCCeEEecCCC-cccHHHHHHHHHHHh
Q 020768 180 GPETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLS-VAKELGADNIVKVSTN-LQDIAEEVEKIQKAM 251 (321)
Q Consensus 180 ~~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~---~~~~-~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~ 251 (321)
-.++++||+|+ +++|...+..+...|+ .|+.+.+++ ++.+ +.++++....+..+-. .++..+.+.++.+.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK- 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-
Confidence 35789999987 5899999999888999 566665543 2333 2344553222322222 22333333333322
Q ss_pred CCCccEEEEcCCCH--------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 252 GTGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 252 ~~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
.+.+|++|.+.|.. + ..+.++..++.+|+++.+++..
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 35799999998731 0 1334456667789998887543
No 215
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.027 Score=49.18 Aligned_cols=82 Identities=21% Similarity=0.307 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-c---CCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-L---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~---g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+++++|+|+ |++|..++..+...|+ .|+++.++.++.+.+.. + +.. .++..+- ...+..+.+.++.+ ..+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 85 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EAG 85 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hcC
Confidence 4789999998 9999999999999999 68888888776544322 1 211 2222221 22333444444333 245
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 79999999983
No 216
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.59 E-value=0.05 Score=44.05 Aligned_cols=81 Identities=22% Similarity=0.258 Sum_probs=51.5
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC--hhHHH-HH---HHcCCCeEEe--cC-CCcccHHHHHHHHHHHhC
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLS-VA---KELGADNIVK--VS-TNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~--~~~~~-~~---~~~g~~~vi~--~~-~~~~~~~~~~~~~~~~~~ 252 (321)
++++|+|+ +++|...++.+...|..+++.+.++ .++.+ +. +..+ ..+.. .+ ...++..+.+.++.+ ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIK-RF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHH-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-ccccccccccccccccccccccccc-cc
Confidence 36899998 9999999888888887788888887 34333 32 3344 32222 22 122333444444432 24
Q ss_pred CCccEEEEcCCCH
Q 020768 253 TGIDVSFDCAGFN 265 (321)
Q Consensus 253 ~~~d~vid~~g~~ 265 (321)
..+|++|.+.|..
T Consensus 79 ~~ld~li~~ag~~ 91 (167)
T PF00106_consen 79 GPLDILINNAGIF 91 (167)
T ss_dssp SSESEEEEECSCT
T ss_pred ccccccccccccc
Confidence 6799999998864
No 217
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.59 E-value=0.064 Score=46.97 Aligned_cols=81 Identities=28% Similarity=0.308 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH---cCCCe-E--EecCCCcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE---LGADN-I--VKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...++.+...|+ .|+.+++++...+..++ .+.+. . .|.. +..+..+.+.++.+. .+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLE-TYAGAQAAMAAAVEA-FG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCC-CHHHHHHHHHHHHHH-cC
Confidence 4678999998 9999999999888998 57777776543333333 23322 1 2222 122333344444332 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|+++.++|.
T Consensus 84 ~id~lv~nAg~ 94 (260)
T PRK12823 84 RIDVLINNVGG 94 (260)
T ss_pred CCeEEEECCcc
Confidence 79999999873
No 218
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.57 E-value=0.0061 Score=58.66 Aligned_cols=78 Identities=22% Similarity=0.341 Sum_probs=53.2
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh---------------------hHHHHHHHcCCCeEEecCCCccc
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD---------------------YRLSVAKELGADNIVKVSTNLQD 239 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~---------------------~~~~~~~~~g~~~vi~~~~~~~~ 239 (321)
.+++|+|+|+|+.|+.++..++..|.+ |++.+..+ ...+.++++|++...+..-. .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 578999999999999999999999994 66666543 34567788887654432111 11
Q ss_pred HHHHHHHHHHHhCCCccEEEEcCCCHH
Q 020768 240 IAEEVEKIQKAMGTGIDVSFDCAGFNK 266 (321)
Q Consensus 240 ~~~~~~~~~~~~~~~~d~vid~~g~~~ 266 (321)
. .+..+ ..++|.||.++|...
T Consensus 218 ~--~~~~~----~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 I--SLDDL----LEDYDAVFLGVGTYR 238 (467)
T ss_pred c--CHHHH----HhcCCEEEEEeCCCC
Confidence 1 11122 135899999999753
No 219
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.54 E-value=0.039 Score=47.93 Aligned_cols=81 Identities=17% Similarity=0.262 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
++.++||+|+ |++|..+++.+...|. +|+.++++.++.+.+ +..+... .+..+-. ..+..+.+..+.+. .+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4789999998 9999999999999998 678888877654433 2234331 2222211 12333333333221 35
Q ss_pred CccEEEEcCC
Q 020768 254 GIDVSFDCAG 263 (321)
Q Consensus 254 ~~d~vid~~g 263 (321)
++|++|.+.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 7899999987
No 220
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.082 Score=46.24 Aligned_cols=83 Identities=20% Similarity=0.251 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH----HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~----~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...++.+...|++.|++++++.++.+ .+++.+... .+..+-. ..+..+.+..+... .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA-FG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 5678999998 999999999999999964888877765443 223334322 1212211 22233333333222 24
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999984
No 221
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.53 E-value=0.091 Score=46.42 Aligned_cols=81 Identities=17% Similarity=0.203 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-C--hhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g--~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.|.+++|+|+ + ++|.++++.+...|+ .|+.++++++..+.+++ .+....+..+- +..+..+.+.++.+. .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV-W 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-c
Confidence 4788999998 4 899998888888999 56666665321222222 23222222222 223333344443332 3
Q ss_pred CCccEEEEcCC
Q 020768 253 TGIDVSFDCAG 263 (321)
Q Consensus 253 ~~~d~vid~~g 263 (321)
+.+|++|++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 56999999997
No 222
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.53 E-value=0.027 Score=49.29 Aligned_cols=81 Identities=22% Similarity=0.238 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+.+++|+|+ |++|...++.+...|++ |+.+. ++++..+.+++.+...+ .|.. +..+..+.+.++.+. .+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVFTIKCDVG-NRDQVKKSKEVVEKE-FGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCeEEEecCC-CHHHHHHHHHHHHHH-cCCCCE
Confidence 4688999998 99999999999889995 55543 34444444444343222 1222 223333334443322 357999
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999874
No 223
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.059 Score=47.26 Aligned_cols=83 Identities=20% Similarity=0.346 Sum_probs=49.7
Q ss_pred CCCCCEEEEEcC-ChhHHHHHHHHHHcC-CCeEEEEeCChhH-HH-H---HHHcCCC--eEEecCCC-cccHHHHHHHHH
Q 020768 179 IGPETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYR-LS-V---AKELGAD--NIVKVSTN-LQDIAEEVEKIQ 248 (321)
Q Consensus 179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~-~~-~---~~~~g~~--~vi~~~~~-~~~~~~~~~~~~ 248 (321)
+..+.++||+|+ |++|...++-+...| + .|+.++++.++ .+ . +++.+.. .++..+-. ..+..+.++++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999999 999999998776664 6 67777776654 22 2 2333321 22322222 223333344443
Q ss_pred HHhCCCccEEEEcCCC
Q 020768 249 KAMGTGIDVSFDCAGF 264 (321)
Q Consensus 249 ~~~~~~~d~vid~~g~ 264 (321)
+ .+++|+++.+.|.
T Consensus 84 ~--~g~id~li~~ag~ 97 (253)
T PRK07904 84 A--GGDVDVAIVAFGL 97 (253)
T ss_pred h--cCCCCEEEEeeec
Confidence 2 2579999987765
No 224
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.53 E-value=0.031 Score=46.82 Aligned_cols=99 Identities=20% Similarity=0.239 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
++++.+||-+|+|. |..++.+++......|++++.+++..+.++ +.+.+.+..... +.. ++.. ...
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~~--~~~ 112 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFGQ--EEK 112 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCCC--CCC
Confidence 45689999998844 555556665544447999999988776554 455543222211 111 1111 357
Q ss_pred ccEEEEcCCC--HHHHHHHHHHcccCCEEEEEcCC
Q 020768 255 IDVSFDCAGF--NKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 255 ~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
+|+|+-.... +..+..+.+.|+++|+++.+-..
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 147 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLALKGR 147 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 9999974332 35777889999999999988544
No 225
>PRK06128 oxidoreductase; Provisional
Probab=96.52 E-value=0.084 Score=47.56 Aligned_cols=106 Identities=20% Similarity=0.193 Sum_probs=62.7
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh--H----HHHHHHcCCCe-EEecCCC-cccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--R----LSVAKELGADN-IVKVSTN-LQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~--~----~~~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~ 251 (321)
.+.++||+|+ |++|...+..+...|++ |+.+..+.+ + .+.++..+... .+..+-. ..+..+.+.++.+.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE- 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence 4689999998 99999999999889994 555544321 1 22333444332 1222211 22233333333322
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCCC
Q 020768 252 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
.+++|++|.+.|.. ...+.++..++.+|+++.++...
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 35799999998841 02344555567788999987543
No 226
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.51 E-value=0.036 Score=48.77 Aligned_cols=82 Identities=22% Similarity=0.264 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
.++++||+|+ +++|...++.+...|+ .|+.+++++++.+.+. +++.. ..+..+- +..+..+.+.++.+. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence 4789999998 9999999999999999 5888888877766554 34321 1222111 122333334443332 35799
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
++|.+.|-
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999883
No 227
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.036 Score=49.82 Aligned_cols=82 Identities=24% Similarity=0.307 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...++.+...|. .|++++++.++.+.+. +.+.+ ..+..+-. ..+..+.+..+.+. .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-IG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 3578999998 9999999999888898 6888888876654332 22322 12222211 22333333333222 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|+++.+.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 228
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.50 E-value=0.11 Score=45.25 Aligned_cols=82 Identities=30% Similarity=0.489 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...++.+...|+ .++.++++.++.+.+ .++ +.. ..+..+-. ..+..+.+..+.+. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-IG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-cC
Confidence 4678999998 9999999999988998 677787776654332 222 322 12222222 22333333333322 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999999984
No 229
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.065 Score=47.28 Aligned_cols=79 Identities=22% Similarity=0.263 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+.+++|+|+ |++|...++.+...|+ .|++++++.++.+.. .+...+ .|+. +.+++.+.+..+.+. .+.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~-d~~~~~~~~~~~~~~-~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVT-DDASVQAAVDEVIAR-AGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecC-CHHHHHHHHHHHHHh-CCCCCEE
Confidence 3568999998 9999999998888898 588887776554322 122221 1221 223344444444332 3579999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.+.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999985
No 230
>PRK09242 tropinone reductase; Provisional
Probab=96.46 E-value=0.15 Score=44.59 Aligned_cols=82 Identities=24% Similarity=0.283 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc-----CCCe-EEecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL-----GADN-IVKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~-----g~~~-vi~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.+.++||+|+ |++|...+..+...|+ .|+.++++.++.+.+. ++ +.+. .+..+- +..+..+.+.++.+.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH- 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH-
Confidence 4789999998 9999999999999999 5777777776654332 22 2111 111111 122333333333332
Q ss_pred CCCccEEEEcCCC
Q 020768 252 GTGIDVSFDCAGF 264 (321)
Q Consensus 252 ~~~~d~vid~~g~ 264 (321)
.+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 3579999999985
No 231
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.042 Score=48.29 Aligned_cols=84 Identities=27% Similarity=0.360 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcC-C-hhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-----cCCCeE--EecCCC-cccHHHHHHHHH
Q 020768 179 IGPETNVLIMGA-G-PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-----LGADNI--VKVSTN-LQDIAEEVEKIQ 248 (321)
Q Consensus 179 ~~~g~~vlI~Ga-g-~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-----~g~~~v--i~~~~~-~~~~~~~~~~~~ 248 (321)
+..+++++|+|+ | ++|..+++.+...|+ .|++++++.++.+...+ ++...+ +..+-. ..+..+.+.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 345789999987 6 799999999999999 57777777765543321 443332 211211 122333333332
Q ss_pred HHhCCCccEEEEcCCC
Q 020768 249 KAMGTGIDVSFDCAGF 264 (321)
Q Consensus 249 ~~~~~~~d~vid~~g~ 264 (321)
+. .+++|++|.+.|.
T Consensus 93 ~~-~g~id~li~~ag~ 107 (262)
T PRK07831 93 ER-LGRLDVLVNNAGL 107 (262)
T ss_pred HH-cCCCCEEEECCCC
Confidence 22 3579999999984
No 232
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.44 E-value=0.034 Score=48.90 Aligned_cols=81 Identities=26% Similarity=0.235 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
.+.+++|+|+ |++|...++.+...|+ .|++++++.++.+.+.+ .+... .+..+- +..+..+.+.++.+. .+.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence 4689999998 9999999999989999 67888887776655544 33221 121111 112233333333322 35789
Q ss_pred EEEEcCC
Q 020768 257 VSFDCAG 263 (321)
Q Consensus 257 ~vid~~g 263 (321)
++|.+.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999987
No 233
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.44 E-value=0.09 Score=45.97 Aligned_cols=82 Identities=18% Similarity=0.275 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCCc-ccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTNL-QDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~~-~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|..++..+...|. .|+.+++++++.+. +++.+... .+..+-.+ ....+.+.++.. ..+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 4689999999 9999999999989999 57777777654432 23334332 12222111 222223333322 135
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999999875
No 234
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.086 Score=45.26 Aligned_cols=75 Identities=24% Similarity=0.333 Sum_probs=47.0
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 261 (321)
+++|+|+ |++|...++.+...|. .|+.++++.++.+.+ ++++...+ ..+-.+.+ .+.++.+.....+|+++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~D~~~~~---~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAI-VCDNTDPA---SLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEE-ecCCCCHH---HHHHHHHHHhhcCcEEEEC
Confidence 5899998 9999999998888898 677778887766543 44554322 22211111 2222222112368999998
Q ss_pred CC
Q 020768 262 AG 263 (321)
Q Consensus 262 ~g 263 (321)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 235
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.42 E-value=0.079 Score=46.14 Aligned_cols=82 Identities=26% Similarity=0.360 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |.+|...++.+...|. .|+++++++++.+.+ .+ .+... .+..+-. ..+..+.+..+.+. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-FG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4679999998 9999999998888898 577787777654432 22 23221 2222222 22333333333322 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.++|.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 236
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.038 Score=48.39 Aligned_cols=85 Identities=20% Similarity=0.234 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCC--eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768 179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD--NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~--~vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.-++.++||+|+ |++|...+..+...|. .|+++.++.+..+.+.+ ..-. ..+..+-. .....+.+.++.+. -.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FG 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 356789999999 9999999999999999 58888877665554433 3221 22222211 22223333333322 25
Q ss_pred CccEEEEcCCCH
Q 020768 254 GIDVSFDCAGFN 265 (321)
Q Consensus 254 ~~d~vid~~g~~ 265 (321)
++|+||.+.|..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 799999988853
No 237
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.03 Score=48.01 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=49.7
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHhCCCccEEEE
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.+++|+|+ |++|...+..+...|. .|+++++++++.+.+++++-......+-.+ ++..+....+ ...++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence 47899998 9999998888888898 688888887766555554322222222111 1222222222 2357999999
Q ss_pred cCCC
Q 020768 261 CAGF 264 (321)
Q Consensus 261 ~~g~ 264 (321)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8764
No 238
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.42 E-value=0.094 Score=46.09 Aligned_cols=107 Identities=16% Similarity=0.209 Sum_probs=62.4
Q ss_pred CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCCh---hHHH-HHHHcCCCe--EEecCC-CcccHHHHHHHHHHH
Q 020768 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLS-VAKELGADN--IVKVST-NLQDIAEEVEKIQKA 250 (321)
Q Consensus 181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~---~~~~-~~~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~ 250 (321)
.|++++|+|+ +++|..+++.+...|+ +|+.+.++. ++.+ ..+++.... .+..+- +.++..+.+.++.+.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4688999987 4999999988888999 566664432 3333 333442111 121111 223333344444332
Q ss_pred hCCCccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768 251 MGTGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
.+++|+++.+.|... ..+.++..++++|+++.+++...
T Consensus 85 -~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 85 -VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred -CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 357999999876310 12344556677899999986543
No 239
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.42 E-value=0.015 Score=47.80 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=65.6
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEe-cCCC--------------cccHHHHHHH
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK-VSTN--------------LQDIAEEVEK 246 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~-~~~~--------------~~~~~~~~~~ 246 (321)
.-+|+|+|+|.+|+.|+.+++.+|+ .+++.+...++.+..+..+...+.. +... .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4689999999999999999999999 6888999999988888887755433 1111 1122222322
Q ss_pred HHHHhCCCccEEEEcCC--C---HHH-HHHHHHHcccCCEEEEEcC
Q 020768 247 IQKAMGTGIDVSFDCAG--F---NKT-MSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 247 ~~~~~~~~~d~vid~~g--~---~~~-~~~~~~~l~~~G~~v~~g~ 286 (321)
.. ..+|++|.+.- + +.. -+..++.|+++..++.++-
T Consensus 99 ~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 99 FI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 22 24688885321 1 111 2366788999999999973
No 240
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.044 Score=47.84 Aligned_cols=82 Identities=23% Similarity=0.246 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe--EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
.+.++||+|+ |++|...++.+...|+ .|+.++++.+..+...++.... .+..+- +..+..+.+.++.+. ..++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4679999998 9999999998888998 5888888776655555543222 222222 122333333333322 35799
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
++|.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999984
No 241
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.11 Score=44.92 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=61.2
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHH----HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLS----VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~----~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
++.+++|+|+ |++|...++.+...|.+ ++.+.+ ++++.+ .++..+.. ..+..+- +..+..+.+.++.+. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 4678999998 99999999999999995 544443 332222 22233322 1222221 122333333333322 3
Q ss_pred CCccEEEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCC
Q 020768 253 TGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 253 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 287 (321)
+++|++|.+.|... ..+.+++.++.+|+++.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 57999999988420 133444555677899999854
No 242
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.39 E-value=0.12 Score=43.49 Aligned_cols=106 Identities=12% Similarity=0.286 Sum_probs=64.2
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
+....++++++||=.|+|. |..++.+++......+++++.+++..+.+++ ++...+..... +..+.+..+
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~-- 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---SAPECLAQL-- 106 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---chHHHHhhC--
Confidence 3556778889888777643 4455566665433479999999988776653 56543322211 222222111
Q ss_pred HhCCCccE-EEEcCCC-HHHHHHHHHHcccCCEEEEEcCC
Q 020768 250 AMGTGIDV-SFDCAGF-NKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 250 ~~~~~~d~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
...+|. .++.... ...++.+.+.|+++|+++.....
T Consensus 107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 144 (196)
T PRK07402 107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATASS 144 (196)
T ss_pred --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEeec
Confidence 122344 4443222 36788999999999999888643
No 243
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.081 Score=46.90 Aligned_cols=81 Identities=22% Similarity=0.223 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
+.++||+|+ |++|..+++.+...|. .|+.++++.++.+.+.+ ++.. ..+..+- +..+..+.+..+.+ ..+++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE-HFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 468999998 9999999988888898 68888888776654443 3321 1122111 12223333333322 2357899
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999885
No 244
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.039 Score=48.16 Aligned_cols=81 Identities=26% Similarity=0.285 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
|+++||+|+ |++|...++.+...|. .|++++++.++.+.+. +.+.. ..+..+- +.++..+.+.++.+. .++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence 468999998 9999999999999999 6888887776554332 22221 1222221 222333334443332 356
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999999873
No 245
>PRK06398 aldose dehydrogenase; Validated
Probab=96.38 E-value=0.073 Score=46.75 Aligned_cols=76 Identities=18% Similarity=0.324 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.|+++||+|+ +++|...+..+...|+ .|+.++++.++.. ....+ .|.. +..+..+.+.++.+. .+.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~-~~~~i~~~~~~~~~~-~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVS-NKEQVIKGIDYVISK-YGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCC-CHHHHHHHHHHHHHH-cCCCCEE
Confidence 4689999998 9999999999999999 5777776654321 11111 1221 222333334443332 3569999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.+.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998874
No 246
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.35 E-value=0.057 Score=46.86 Aligned_cols=82 Identities=21% Similarity=0.229 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh--HHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~--~~~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
.+.++||+|+ |++|...+..+...|+ .|+.++++.. ..+.+++++.. ..+..+- +..+..+.+.++.+. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence 4789999998 9999999999988999 5777766542 22333444432 1222221 122333333333222 3579
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999874
No 247
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.35 E-value=0.13 Score=44.22 Aligned_cols=81 Identities=26% Similarity=0.334 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCeEE---ecCCCcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIV---KVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vi---~~~~~~~~~~~~~~~~~~~~~ 252 (321)
++.++||+|+ |++|...++.+...|. .|+++.+++++.+.. +..+....+ |.. +.....+.+.++... .
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVS-DEAAVRALIEAAVEA-F 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCC-CHHHHHHHHHHHHHH-h
Confidence 4578999999 9999999999888999 488888887664432 233432221 221 122333333333322 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
..+|.++.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 568999999865
No 248
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.045 Score=47.30 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecC-CCcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~-~~~~~~~~~~~~~~~~~~~ 253 (321)
.|.+++|+|+ +++|...+..+...|+ .|+.+.++.++.+.+ ++.+.+. .+..+ .+.++..+.+.++.+..+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 9999999988888999 577777777665432 2334332 12112 1223333344444333343
Q ss_pred CccEEEEcCC
Q 020768 254 GIDVSFDCAG 263 (321)
Q Consensus 254 ~~d~vid~~g 263 (321)
.+|++|.+.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
No 249
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.33 E-value=0.13 Score=44.68 Aligned_cols=79 Identities=27% Similarity=0.323 Sum_probs=50.2
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCccEEE
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
+++|+|+ |++|...+..+...|+ .|+++++++++.+.+. .++... .+..+- +..+..+.+.++.+. .+++|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE-WRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence 6899998 9999999999999999 6888888877765543 344321 111111 122233333333222 35799999
Q ss_pred EcCCC
Q 020768 260 DCAGF 264 (321)
Q Consensus 260 d~~g~ 264 (321)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 250
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.30 E-value=0.15 Score=44.09 Aligned_cols=99 Identities=23% Similarity=0.265 Sum_probs=64.4
Q ss_pred HHHHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCC--eEEEEeCC----hhH--------HHHHHHcCCCeEEecCCC
Q 020768 172 HACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAP--RIVIVDVD----DYR--------LSVAKELGADNIVKVSTN 236 (321)
Q Consensus 172 ~~l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~--~vv~v~~~----~~~--------~~~~~~~g~~~vi~~~~~ 236 (321)
.+++..+. -.+.+++|+|+|+.|..++..+...|.+ +++.++++ .+| .+++++++... ..
T Consensus 14 ~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---- 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---- 88 (226)
T ss_pred HHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc----
Confidence 33444332 3567999999999999999999999998 89999888 343 34555544211 00
Q ss_pred cccHHHHHHHHHHHhCCCccEEEEcCCCHHHH-HHHHHHcccCCEEEEEc
Q 020768 237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM-STALSATRAGGKVCLVG 285 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g 285 (321)
.++.+.+ .++|++|.+++. ..+ ...++.++++..++.+.
T Consensus 89 -~~l~~~l--------~~~dvlIgaT~~-G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 -GTLKEAL--------KGADVFIGVSRP-GVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -CCHHHHH--------hcCCEEEeCCCC-CCCCHHHHHhhCCCCEEEEeC
Confidence 1222221 248999999973 344 36667777777666555
No 251
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.29 E-value=0.092 Score=48.80 Aligned_cols=83 Identities=18% Similarity=0.091 Sum_probs=48.9
Q ss_pred CCCCEEEEEcC-ChhHHH--HHHHHHHcCCCeEEEEeCCh---h-------------HHHHHHHcCCCe-EEecCCC-cc
Q 020768 180 GPETNVLIMGA-GPIGLV--TMLGARAFGAPRIVIVDVDD---Y-------------RLSVAKELGADN-IVKVSTN-LQ 238 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~--a~qla~~~g~~~vv~v~~~~---~-------------~~~~~~~~g~~~-vi~~~~~-~~ 238 (321)
..++++||+|+ +++|++ .++.+ ..|++ +++++... + -.+.+++.|... .+..+-. .+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 44578999998 999999 45555 78984 55665322 1 123455666542 2332222 23
Q ss_pred cHHHHHHHHHHHhCCCccEEEEcCCCH
Q 020768 239 DIAEEVEKIQKAMGTGIDVSFDCAGFN 265 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~d~vid~~g~~ 265 (321)
+..+.+.++.+. .+++|+++.+.+.+
T Consensus 117 ~v~~lie~I~e~-~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQD-LGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHh-cCCCCEEEECCccC
Confidence 333344444432 45799999988875
No 252
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.1 Score=45.20 Aligned_cols=42 Identities=26% Similarity=0.253 Sum_probs=33.7
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL 225 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~ 225 (321)
.+++|+|+ |++|...+..+...|+ .|+++++++++.+.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence 46899998 9999988888888899 588888888777655543
No 253
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.049 Score=47.58 Aligned_cols=82 Identities=24% Similarity=0.258 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.++++||+|+ +++|...++.+...|+ +|+.++++.++.+.+. + .+... .+..+- +..+..+.+.++.+. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE-LG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 4789999998 9999999999999999 5777777766654332 2 23221 122211 222333334443332 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 254
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.28 E-value=0.037 Score=49.23 Aligned_cols=99 Identities=14% Similarity=0.109 Sum_probs=62.5
Q ss_pred HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
.+++......+.+++|+|+|+.+.+++..+...|+..+.++.++.+|.+.+ +.++.. + .+.+
T Consensus 112 ~~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~~------ 174 (272)
T PRK12550 112 KLLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPDL------ 174 (272)
T ss_pred HHHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhhc------
Confidence 344444445567899999999999999999999998899999988776654 444321 0 0001
Q ss_pred hCCCccEEEEcCCCHHH-------HHHHHHHcccCCEEEEEcCC
Q 020768 251 MGTGIDVSFDCAGFNKT-------MSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~~-------~~~~~~~l~~~G~~v~~g~~ 287 (321)
....+|++|+|+.-.-. ..-....+.++..++.+-+.
T Consensus 175 ~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~ 218 (272)
T PRK12550 175 GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVAL 218 (272)
T ss_pred ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecC
Confidence 01348999999763210 01112446666666555543
No 255
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.045 Score=47.56 Aligned_cols=82 Identities=22% Similarity=0.281 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...++.+...|. .|+.+++++++.+.+ +++ +.. ..+..+-. ..+..+...++.+. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-FG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence 4678999998 9999999998888998 678888776554332 222 211 12222211 12222233333322 34
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999999883
No 256
>PRK07985 oxidoreductase; Provisional
Probab=96.27 E-value=0.14 Score=46.09 Aligned_cols=105 Identities=17% Similarity=0.156 Sum_probs=62.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC--hhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~--~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~ 251 (321)
.+.++||+|+ +++|...++.+...|+ .|+.+.++ .++.+. .++.+... .+..+-. .++..+.+.++.+.
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA- 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 5678999998 9999999999999999 46665433 222222 22334322 1222211 22333333443322
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHcccCCEEEEEcCC
Q 020768 252 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
.+++|+++.+.|.. ..++.++..++.+|+++.+++.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 35799999988731 1233455556678999998854
No 257
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.26 E-value=0.071 Score=48.48 Aligned_cols=95 Identities=18% Similarity=0.183 Sum_probs=59.8
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 262 (321)
+|+|+|+ |.+|...++.+...|. .|.++.++.++...+...+++.+. .+- .+. +.+.+. -.++|+||.++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl--~d~-~~l~~a----l~g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDL--SLP-ETLPPS----FKGVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCC--CCH-HHHHHH----HCCCCEEEECC
Confidence 6999998 9999999999888998 577777776665555555554322 111 121 223222 14689999987
Q ss_pred CCHH------------HHHHHHHHcccCC--EEEEEcCC
Q 020768 263 GFNK------------TMSTALSATRAGG--KVCLVGMG 287 (321)
Q Consensus 263 g~~~------------~~~~~~~~l~~~G--~~v~~g~~ 287 (321)
+... ....+++.++..| +++.++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 6321 1134555555554 78888764
No 258
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.26 E-value=0.065 Score=45.88 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEe-c------CCCccc-HHHHHHHHHH
Q 020768 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVK-V------STNLQD-IAEEVEKIQK 249 (321)
Q Consensus 179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~-~------~~~~~~-~~~~~~~~~~ 249 (321)
..++.+||+.|+|. |.-++.+|. .|. .|++++-++...+.+ ++.+...... . ....-+ ....+.++..
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999999865 777777775 698 699999999888864 3344321100 0 000000 0000001100
Q ss_pred HhCCCccEEEEcCC--------CHHHHHHHHHHcccCCEEEEEcC
Q 020768 250 AMGTGIDVSFDCAG--------FNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 250 ~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
.....+|.++|+.. ....++.+.++|++||++++++.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 01245899999653 13468899999999999777764
No 259
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.24 E-value=0.13 Score=44.73 Aligned_cols=83 Identities=20% Similarity=0.171 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
++.++||+|+ |++|...+..+...|.++++...++.++.+. .+..+... .+..+-. ..+..+.+.+..+. .+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-FG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4679999998 9999999999999998544434555544322 22334322 2222221 22333333333332 34
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 260
>PRK06484 short chain dehydrogenase; Validated
Probab=96.24 E-value=0.14 Score=49.96 Aligned_cols=82 Identities=28% Similarity=0.378 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
.++++||+|+ +++|...++.+...|+ +|+.++++.++.+. .++++... .+..+- +..+..+.+.++.+. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE-FGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence 5789999998 9999999999999999 68888787776554 44565432 122211 223333444444332 35799
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
++|.+.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
No 261
>PRK08317 hypothetical protein; Provisional
Probab=96.22 E-value=0.082 Score=45.48 Aligned_cols=104 Identities=24% Similarity=0.294 Sum_probs=68.8
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHc--CCCeEEecCCCcccHHHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL--GADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~--g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
++...++++++||-+|+|. |..+..+++..+ ...+++++.+++..+.+++. .....+.+... +.. ... .
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~--d~~----~~~-~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG--DAD----GLP-F 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec--ccc----cCC-C
Confidence 4667889999999999966 888888988773 34799999999988888764 11111111110 100 000 0
Q ss_pred hCCCccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEEc
Q 020768 251 MGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 251 ~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|+|+... .. ...+..+.++|+++|.+++..
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 135688887532 22 347789999999999998875
No 262
>PRK00811 spermidine synthase; Provisional
Probab=96.21 E-value=0.035 Score=49.76 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC--------CeEEecCCCcccHHHHHHHHHHHh
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA--------DNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~--------~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
...++||++|+|. |..+..+++..+...|.+++.+++-.+.+++.-. +.-+.+. ..|..+.+.. .
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~--~~Da~~~l~~----~ 147 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV--IGDGIKFVAE----T 147 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE--ECchHHHHhh----C
Confidence 4567999998755 6667777777677789999999998888876311 1101110 1233333322 2
Q ss_pred CCCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768 252 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 252 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 285 (321)
...+|+||-.... .+.++.+.+.|+++|.++.-.
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 4679999875422 245678889999999998754
No 263
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.21 E-value=0.14 Score=43.84 Aligned_cols=106 Identities=22% Similarity=0.325 Sum_probs=73.8
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
++.+...+||=+| ..+|+.++.+|..+. -.++++++.++++.+.++ +.|.+..+..-.. .+..+.+.+ ..
T Consensus 55 ~~~~~~k~iLEiG-T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~ 129 (219)
T COG4122 55 ARLSGPKRILEIG-TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL 129 (219)
T ss_pred HHhcCCceEEEee-cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence 4556778888777 456888888888876 347999999999888765 5676653332221 244444433 23
Q ss_pred CCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEcCC
Q 020768 252 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 252 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
.+.||+||--..- +..++.+++.|++||.++.=...
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNvl 168 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNVL 168 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeecc
Confidence 5779999864443 45799999999999999887744
No 264
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.20 E-value=0.044 Score=44.05 Aligned_cols=104 Identities=24% Similarity=0.285 Sum_probs=66.2
Q ss_pred HHHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCeE-EecCCCcccHHHHHHHHHH
Q 020768 173 ACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNI-VKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 173 ~l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~v-i~~~~~~~~~~~~~~~~~~ 249 (321)
+++.... ..+.+++|+|+|.+|...++.+...|...+.+++++.++.+. +++++...+ ... .+.. +.
T Consensus 9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~----~~-- 78 (155)
T cd01065 9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLE----EL-- 78 (155)
T ss_pred HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchh----hc--
Confidence 3444443 457889999999999999988888864478888888776554 555664310 011 1111 11
Q ss_pred HhCCCccEEEEcCCCHHH----HHHHHHHcccCCEEEEEcCCC
Q 020768 250 AMGTGIDVSFDCAGFNKT----MSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~----~~~~~~~l~~~G~~v~~g~~~ 288 (321)
-.++|+|+.|++.+.. .......++++..++.+++..
T Consensus 79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 2568999999987532 112234567888888887653
No 265
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.19 E-value=0.13 Score=43.92 Aligned_cols=102 Identities=20% Similarity=0.134 Sum_probs=65.2
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
++...++++++||-+|+|. |..+..+++..+ .+++++.+++..+.++ +.+...+..... +..+. +.
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---~~- 140 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLVR--RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKG---WP- 140 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHhC--EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccC---CC-
Confidence 4567889999999998754 555555666543 6999999987766554 345443211111 11110 00
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
....+|+|+....-......+.+.|+++|+++..-.
T Consensus 141 -~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 141 -AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred -cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence 125699988766555667788899999999877643
No 266
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.17 Score=44.04 Aligned_cols=108 Identities=17% Similarity=0.183 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHH-HHH---HcCCCe-EEecCC-CcccHHHHHHHHHHH--
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS-VAK---ELGADN-IVKVST-NLQDIAEEVEKIQKA-- 250 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~-~~~---~~g~~~-vi~~~~-~~~~~~~~~~~~~~~-- 250 (321)
.+.+++|+|+ +++|...++.+...|++ |+.+ .++.++.+ ... +.+... .+..+- +..+....+.++.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999998 99999999999999984 5554 34434332 222 223221 111111 111222222222211
Q ss_pred ---hCCCccEEEEcCCCHH-------------------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768 251 ---MGTGIDVSFDCAGFNK-------------------------TMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 251 ---~~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
+..++|+++.+.|... ..+.++..++..|+++.+++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 1237999999988310 12345566677799999986543
No 267
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.041 Score=48.15 Aligned_cols=82 Identities=24% Similarity=0.216 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH---cCCC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~---~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
.+.++||+|+ |++|...++.+...|++ ++++.+++++.+..++ .+.. ..+..+- +..+..+.+.++... .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence 4679999998 99999999888889995 6666676665544433 2322 1222211 112233333333322 357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999983
No 268
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.059 Score=46.58 Aligned_cols=83 Identities=19% Similarity=0.325 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCC-C---eEEecCCC-cccHHHHHHHHHHH
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGA-D---NIVKVSTN-LQDIAEEVEKIQKA 250 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~-~---~vi~~~~~-~~~~~~~~~~~~~~ 250 (321)
++.+++|+|+ |++|...++.+...|. .|+++++++++.+.+ .+ .+. . ...|..+. ..++.+...++...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999998 9999999999988999 688888887665433 22 221 1 11222211 12333333344333
Q ss_pred hCCCccEEEEcCCC
Q 020768 251 MGTGIDVSFDCAGF 264 (321)
Q Consensus 251 ~~~~~d~vid~~g~ 264 (321)
....+|.+|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 22578999999984
No 269
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.16 E-value=0.094 Score=44.44 Aligned_cols=46 Identities=22% Similarity=0.369 Sum_probs=38.4
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCC
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGA 227 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~ 227 (321)
.|.+++|.|.|.+|..+++.+...|+ .|++++.+.++.+.+. .+++
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 57899999999999999999999999 6888888888766554 4464
No 270
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.056 Score=47.38 Aligned_cols=81 Identities=21% Similarity=0.181 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCC-e--EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-N--IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~--vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
+.+++|+|+ |++|...+..+...|+ .|++++++.++.+.+. ++... . .+..+- +.++..+.+.++.+. .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence 468999998 9999999999888899 6888888877665443 33211 1 122211 122333333333322 3458
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 271
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.15 E-value=0.25 Score=43.07 Aligned_cols=82 Identities=15% Similarity=0.266 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...+..+...|+ .|+.++++.++.+.+ ++.+.. ..+..+- +..+..+.+.++... .+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE-HG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence 5789999998 9999999988888899 688888876554322 233422 1222221 222333334443332 34
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|.+|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 272
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.083 Score=46.09 Aligned_cols=75 Identities=19% Similarity=0.207 Sum_probs=47.3
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
+.++||+|+ |++|...++.+...|+ .|+++.++.++.+.+. ..+... ++..+- .+. +.+.+. ...++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCCC
Confidence 458999999 9999999999999998 5777777765544432 233221 111111 122 123222 13479
Q ss_pred cEEEEcCC
Q 020768 256 DVSFDCAG 263 (321)
Q Consensus 256 d~vid~~g 263 (321)
|++|.+.|
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999987
No 273
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.2 Score=44.89 Aligned_cols=106 Identities=20% Similarity=0.202 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-HH----HHHHHcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RL----SVAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~~----~~~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~ 252 (321)
.+.++||+|+ |++|...+..+...|+ .|+.+.++.+ .. +.++..+... .+..+-. ..+..+.+.++.+. .
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-~ 122 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE-L 122 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 4678999998 9999999988888899 5666655532 11 1222233322 2222211 22223333333322 3
Q ss_pred CCccEEEEcCCCHH--------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 253 TGIDVSFDCAGFNK--------------------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 253 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+++|++|.+.|... ..+.+...++++|+++.++...
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 57899999887410 1233445556778999988643
No 274
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.11 E-value=0.037 Score=53.64 Aligned_cols=74 Identities=30% Similarity=0.434 Sum_probs=53.4
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+.+|++|+|+|.|..|++++.+++..|+ .|++.+.++++.+.++++|+.. +... ...+ .+ ..+|+
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~----~~~~---~l-----~~~D~ 73 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTS----DAVQ---QI-----ADYAL 73 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCc----chHh---Hh-----hcCCE
Confidence 34578999999999999999999999999 6888887766666677777743 2211 1111 11 24799
Q ss_pred EEEcCCCH
Q 020768 258 SFDCAGFN 265 (321)
Q Consensus 258 vid~~g~~ 265 (321)
|+.+.|-+
T Consensus 74 VV~SpGi~ 81 (488)
T PRK03369 74 VVTSPGFR 81 (488)
T ss_pred EEECCCCC
Confidence 99988865
No 275
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.11 E-value=0.062 Score=46.36 Aligned_cols=80 Identities=19% Similarity=0.280 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-HHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
+.++||+|+ +++|...++.+...|+ .|+.+++++++ .+.+++.++. .+..+- +..+..+.+.++.+. .+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQH-TDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhh-CCCccEE
Confidence 468999998 9999999998888999 57777766543 3344455543 222221 222333334443322 3469999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
+.+.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999874
No 276
>PRK06196 oxidoreductase; Provisional
Probab=96.11 E-value=0.054 Score=49.16 Aligned_cols=82 Identities=18% Similarity=0.289 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+.+++|+|+ |++|..++..+...|+ .|+++.++.++.+.+ .++..-..+..+- +..+..+.+.++.+ ..+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence 4679999999 9999999998888998 577777877665433 3332112222221 12222333333322 2357999
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
+|.+.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999873
No 277
>PRK04457 spermidine synthase; Provisional
Probab=96.10 E-value=0.091 Score=46.54 Aligned_cols=97 Identities=16% Similarity=0.167 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-CCC----eEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GAD----NIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-g~~----~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
.++.+||++|+|+ |.++..+++......+.+++.+++-.+.+++. +.. .+-... .|..+.+.+ ....
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~---~Da~~~l~~----~~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE---ADGAEYIAV----HRHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE---CCHHHHHHh----CCCC
Confidence 4567899999865 77888888877555799999999999998863 321 111111 233333332 2457
Q ss_pred ccEEEEcC--C--------CHHHHHHHHHHcccCCEEEEE
Q 020768 255 IDVSFDCA--G--------FNKTMSTALSATRAGGKVCLV 284 (321)
Q Consensus 255 ~d~vid~~--g--------~~~~~~~~~~~l~~~G~~v~~ 284 (321)
+|+|+--. + ..+.++.+.+.|+++|.++..
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 99887321 1 136788999999999999873
No 278
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.09 E-value=0.11 Score=42.38 Aligned_cols=107 Identities=21% Similarity=0.241 Sum_probs=66.2
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 262 (321)
.+|.++|.|.+|...+.-+...|+ .|.+-++++++.+.+.+.|+... .+..+... ..|+||-|+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~--------~~dvvi~~v 65 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAE--------QADVVILCV 65 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHH--------HBSEEEE-S
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHhh--------cccceEeec
Confidence 368899999999999998888999 68889999999988887774322 12222221 258999999
Q ss_pred CCHHHHHHHH------HHcccCCEEEEEcCCCCCccccchh-hhccceEE
Q 020768 263 GFNKTMSTAL------SATRAGGKVCLVGMGHLEMTVPLTP-AAARYLIY 305 (321)
Q Consensus 263 g~~~~~~~~~------~~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~~~i 305 (321)
.+++.....+ ..+.++..++.++...+.....+.. +-.+++.+
T Consensus 66 ~~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~ 115 (163)
T PF03446_consen 66 PDDDAVEAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRY 115 (163)
T ss_dssp SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEE
T ss_pred ccchhhhhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhcccee
Confidence 9866555543 3455666777777655544444443 23445543
No 279
>PLN02366 spermidine synthase
Probab=96.09 E-value=0.057 Score=48.94 Aligned_cols=100 Identities=24% Similarity=0.260 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-------eEEecCCCcccHHHHHHHHHHHhC
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-------NIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-------~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
...++||++|+|. |.++..+++.-+...+.+++-+++-.+.++++-.. .-+.+. ..|..+.+++. .+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi--~~Da~~~l~~~---~~ 163 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH--IGDGVEFLKNA---PE 163 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE--EChHHHHHhhc---cC
Confidence 4578999998865 55677788876666899999999888888773211 001100 12333333321 14
Q ss_pred CCccEEEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768 253 TGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 253 ~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 285 (321)
..+|+||--... .+.++.+.+.|+++|.++.-+
T Consensus 164 ~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 164 GTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred CCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 569999875433 245788899999999997654
No 280
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.09 E-value=0.022 Score=54.52 Aligned_cols=94 Identities=11% Similarity=0.120 Sum_probs=62.8
Q ss_pred HcCCCCCCEEE----EEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCe-EEecCCCcccHHHHHHHHHH
Q 020768 176 RANIGPETNVL----IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 176 ~~~~~~g~~vl----I~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~ 249 (321)
..++++|+.+| |+|+ |++|..++|+++..|+ .|+++...+++....+..+.+. +.+. ...++.+.+..+
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~l~~~-- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDA--TGITDPADLKAL-- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEEC--CCCCCHHHHHHH--
Confidence 35778999988 8876 9999999999999999 5777665555444334445553 3332 222333333322
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
-..+...++.|.++|+++.++....
T Consensus 103 ---------------~~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 103 ---------------YEFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred ---------------HHHHHHHHHhccCCCEEEEEccccc
Confidence 1456777888889999999986543
No 281
>PRK08589 short chain dehydrogenase; Validated
Probab=96.08 E-value=0.074 Score=47.13 Aligned_cols=82 Identities=22% Similarity=0.334 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~---g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
.+.++||+|+ +++|...++.+...|+ .|++++++++..+.++++ +.. ..+..+- +..+..+.+.++.+. .++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ-FGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH-cCC
Confidence 4779999998 9999999998888999 677777774333333333 322 1222211 122333334444332 356
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999999874
No 282
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.08 E-value=0.052 Score=50.85 Aligned_cols=93 Identities=24% Similarity=0.313 Sum_probs=57.0
Q ss_pred EEEEcCChhHHHHHHHHHHcCCC-eEEEEeCChhHHHHHHH--cCCC-eEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 185 VLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE--LGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 185 vlI~Gag~vG~~a~qla~~~g~~-~vv~v~~~~~~~~~~~~--~g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
|+|+|+|.+|..+++.+....-. .+++.+++.++.+.+.+ .+.. ..+..+- .+.. .+.++. .+.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~-~l~~~~----~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPE-SLAELL----RGCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHH-HHHHHH----TTSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHH-HHHHHH----hcCCEEEE
Confidence 68999999999999999877643 68889999998766543 2221 1111111 1222 244442 35699999
Q ss_pred cCCCHHHHHHHHHHcccCCEEEEE
Q 020768 261 CAGFNKTMSTALSATRAGGKVCLV 284 (321)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~ 284 (321)
|+|......-+-.++..+-.++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CCccchhHHHHHHHHHhCCCeecc
Confidence 999754544555666777777773
No 283
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.05 E-value=0.045 Score=49.22 Aligned_cols=146 Identities=19% Similarity=0.312 Sum_probs=80.2
Q ss_pred cCCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH
Q 020768 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE 224 (321)
Q Consensus 145 ~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~ 224 (321)
+.+..+.+.+++.|-....-.+.. .+..++.. .++|++||=+|+|. |.+++..++ +|++.|+++|.++...+.+++
T Consensus 127 ~~~~~I~idPg~AFGTG~H~TT~l-cl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~ 202 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTGHHPTTRL-CLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARE 202 (295)
T ss_dssp TTSEEEEESTTSSS-SSHCHHHHH-HHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHH
T ss_pred CCcEEEEECCCCcccCCCCHHHHH-HHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHH
Confidence 445667777777665544221111 12333332 57889998888743 555544444 599899999999876665542
Q ss_pred ----cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCHH---HHHHHHHHcccCCEEEEEcCCCCCccccchh
Q 020768 225 ----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK---TMSTALSATRAGGKVCLVGMGHLEMTVPLTP 297 (321)
Q Consensus 225 ----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 297 (321)
-|...-+.... ..+. ....+|+|+-..-.+- ..+.+.+.++++|.+++-|...... -.+..
T Consensus 203 N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~~~-~~v~~ 270 (295)
T PF06325_consen 203 NAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEEQE-DEVIE 270 (295)
T ss_dssp HHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGGGH-HHHHH
T ss_pred HHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHHHH-HHHHH
Confidence 33332221111 1111 1267899997766532 3345567899999999999764432 22233
Q ss_pred hhccceEEE
Q 020768 298 AAARYLIYS 306 (321)
Q Consensus 298 ~~~k~~~i~ 306 (321)
.+.++.++.
T Consensus 271 a~~~g~~~~ 279 (295)
T PF06325_consen 271 AYKQGFELV 279 (295)
T ss_dssp HHHTTEEEE
T ss_pred HHHCCCEEE
Confidence 333455554
No 284
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.05 E-value=0.078 Score=48.25 Aligned_cols=81 Identities=21% Similarity=0.347 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC---C-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA---D-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~---~-~vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...++.+...|+ .|++++++.++.+.+ +++.. . ..+..+- +..+..+.+.++.+ ...
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA-LGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH-hCC
Confidence 4678999998 9999999998888898 677777777665433 33321 1 1222111 11222223333322 245
Q ss_pred CccEEEEcCC
Q 020768 254 GIDVSFDCAG 263 (321)
Q Consensus 254 ~~d~vid~~g 263 (321)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
No 285
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.089 Score=45.92 Aligned_cols=82 Identities=20% Similarity=0.191 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ +++|...+..+...|+ .|+.+++++++.+.+ ++.+... .+..+- +..+..+.+.++.+. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence 3678999998 9999999998888999 577777777665433 2233322 222221 122233333433332 34
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|++|.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 286
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.03 E-value=0.055 Score=49.40 Aligned_cols=80 Identities=23% Similarity=0.318 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCCe----EEecCCCcccHHHHHHHHHHH
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GADN----IVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~----vi~~~~~~~~~~~~~~~~~~~ 250 (321)
.|.+++|+|+ +++|...+..+...|+ .|+.+++++++.+.+. ++ +... ..|..+ +..+...++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~---~~~~~~~~l~~~ 127 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG---DIDEGVKRIKET 127 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC---CcHHHHHHHHHH
Confidence 5889999999 9999998888888899 5888888887765432 22 2111 123322 222333333322
Q ss_pred -hCCCccEEEEcCCC
Q 020768 251 -MGTGIDVSFDCAGF 264 (321)
Q Consensus 251 -~~~~~d~vid~~g~ 264 (321)
.+..+|++++++|.
T Consensus 128 ~~~~didilVnnAG~ 142 (320)
T PLN02780 128 IEGLDVGVLINNVGV 142 (320)
T ss_pred hcCCCccEEEEecCc
Confidence 23346799998873
No 287
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.02 E-value=0.13 Score=40.83 Aligned_cols=95 Identities=20% Similarity=0.262 Sum_probs=56.9
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEE-ecCCCccc
Q 020768 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIV-KVSTNLQD 239 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi-~~~~~~~~ 239 (321)
+|+|.|+|++|...+..+...|...+..+|.+. .| .+.++++....-+ .+.... +
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~-~ 79 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGI-S 79 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeec-C
Confidence 589999999999999999999998888886541 11 2223344432211 111111 1
Q ss_pred HHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEE
Q 020768 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284 (321)
Q Consensus 240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 284 (321)
.. ...+ .-.++|+||+|..+......+.+.++..+.-+..
T Consensus 80 ~~-~~~~----~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~ 119 (143)
T cd01483 80 ED-NLDD----FLDGVDLVIDAIDNIAVRRALNRACKELGIPVID 119 (143)
T ss_pred hh-hHHH----HhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEE
Confidence 01 1111 1357999999999866555566666666644333
No 288
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.02 E-value=0.22 Score=43.75 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=61.3
Q ss_pred CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCC------hhHHHHHHHcC-CCeEEecCC-CcccHHHHHHHHHH
Q 020768 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVD------DYRLSVAKELG-ADNIVKVST-NLQDIAEEVEKIQK 249 (321)
Q Consensus 181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~------~~~~~~~~~~g-~~~vi~~~~-~~~~~~~~~~~~~~ 249 (321)
.|++++|+|+ +++|...+..+...|++ |+.+..+ .+..+.+++.+ ....+..+- +.++..+.+.++.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4688999996 48999999988889994 5555332 12222222222 112222221 22233333344333
Q ss_pred HhCCCccEEEEcCCCH-------H----------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 250 AMGTGIDVSFDCAGFN-------K----------------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
. .+++|+++++.|.. . ..+.++..++.+|+++.++...
T Consensus 84 ~-~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 84 K-WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred H-cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 2 35799999998731 0 1345666777789999887543
No 289
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.00 E-value=0.089 Score=45.94 Aligned_cols=82 Identities=20% Similarity=0.304 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...++.+...|+ .|+.+++++++.+.+ ++.|... .+..+-. ..+..+.+.++.. ..+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence 4789999998 9999999998888999 577787776654432 2223221 1211111 2233333333322 245
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 290
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.00 E-value=0.07 Score=46.32 Aligned_cols=104 Identities=24% Similarity=0.339 Sum_probs=73.1
Q ss_pred HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 020768 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~ 247 (321)
.+.++++.||++|+=.|.|. |.+++.+|++.|. ..|+..+..++..+.++ ++|....+.... .|..+..
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~Dv~~~~--- 159 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GDVREGI--- 159 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--ccccccc---
Confidence 35678999999998877644 8888888987765 47999998888777664 345544322211 2322221
Q ss_pred HHHhCCCccEEEEcCCCH-HHHHHHHHHcccCCEEEEEc
Q 020768 248 QKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|.+|--...+ +.++.+.+.|+++|+++++.
T Consensus 160 ---~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 160 ---DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred ---cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 134788887666654 67889999999999999987
No 291
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.99 E-value=0.08 Score=43.72 Aligned_cols=95 Identities=16% Similarity=0.268 Sum_probs=62.5
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 262 (321)
+|.|+|| |-+|...++-|+..|. .|.++.++++|....+..-+ +. .+--+....... -.|+|+||++.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i---~q--~Difd~~~~a~~-----l~g~DaVIsA~ 70 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTI---LQ--KDIFDLTSLASD-----LAGHDAVISAF 70 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhcccccccee---ec--ccccChhhhHhh-----hcCCceEEEec
Confidence 5789999 9999999999999999 58888888888754322111 11 111111111111 36899999988
Q ss_pred CCH--H-------HHHHHHHHcccC--CEEEEEcCCCC
Q 020768 263 GFN--K-------TMSTALSATRAG--GKVCLVGMGHL 289 (321)
Q Consensus 263 g~~--~-------~~~~~~~~l~~~--G~~v~~g~~~~ 289 (321)
|.. . ..+.++..|+.- -|++.+|..++
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 864 1 244567777763 48999986543
No 292
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.98 E-value=0.23 Score=43.02 Aligned_cols=107 Identities=16% Similarity=0.154 Sum_probs=61.7
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH----HHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~----~~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
+.++||+|+ |++|...+..+...|++.++...++.++. ..+++.+... .+..+- +..+..+.+.++.+. ..+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cCC
Confidence 578999998 99999998888889995334333333222 2223333321 222211 112222333333332 357
Q ss_pred ccEEEEcCCC----------HH---------------HHHHHHHHcccCCEEEEEcCCCC
Q 020768 255 IDVSFDCAGF----------NK---------------TMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 255 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
+|++|.+.|. .+ ..+.+.+.++..|+++.++....
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 8999999983 11 13345566677899999986543
No 293
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.98 E-value=0.029 Score=56.24 Aligned_cols=77 Identities=22% Similarity=0.294 Sum_probs=53.7
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh---------------------HHHHHHHcCCCeEEecCCCccc
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY---------------------RLSVAKELGADNIVKVSTNLQD 239 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~vi~~~~~~~~ 239 (321)
.+++|+|+|+|+.|+.++..++..|.+ |.+.+..+. +.++++++|++...+..-. .+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIG-RD 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccC-Cc
Confidence 489999999999999999999999994 666765542 4567788887655442211 11
Q ss_pred HHHHHHHHHHHhCCCccEEEEcCCCH
Q 020768 240 IAEEVEKIQKAMGTGIDVSFDCAGFN 265 (321)
Q Consensus 240 ~~~~~~~~~~~~~~~~d~vid~~g~~ 265 (321)
. .+.++ ..++|.||.++|..
T Consensus 387 ~--~~~~l----~~~~DaV~latGa~ 406 (639)
T PRK12809 387 I--TFSDL----TSEYDAVFIGVGTY 406 (639)
T ss_pred C--CHHHH----HhcCCEEEEeCCCC
Confidence 1 11222 24689999999974
No 294
>PRK06194 hypothetical protein; Provisional
Probab=95.97 E-value=0.097 Score=46.59 Aligned_cols=82 Identities=24% Similarity=0.322 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc---CCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...+..+...|+ .|++++++.++.+.. .++ +... .+..+-. ..+..+.+..+.+ ..+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE-RFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 3678999998 9999999998888998 577777776554332 222 3321 1222211 1223333333322 235
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 78999999885
No 295
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.97 E-value=0.028 Score=50.40 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=51.4
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+.+++|+|+|+.+.+++..+..+|++.+.++.++.+|.+.+ ++++... +.... ..+.+... -..+|+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~----~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAI----EKAAEVL 194 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhc----ccCCCEE
Confidence 578999999999999999999999998899999988776644 4444211 11111 00111111 2468999
Q ss_pred EEcCCCH
Q 020768 259 FDCAGFN 265 (321)
Q Consensus 259 id~~g~~ 265 (321)
|+|++..
T Consensus 195 InaTp~g 201 (282)
T TIGR01809 195 VSTVPAD 201 (282)
T ss_pred EECCCCC
Confidence 9998764
No 296
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.11 Score=44.84 Aligned_cols=83 Identities=23% Similarity=0.250 Sum_probs=51.8
Q ss_pred CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
..+.+++|+|+ |++|..++..+...|. .|+++++++++.+.+. +.+... .+..+- +.++..+.+..+.+. .
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-F 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 34578999998 9999999999998998 6888888776554332 222221 222221 122333333333322 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+++|+++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 569999999884
No 297
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.97 E-value=0.18 Score=42.92 Aligned_cols=93 Identities=17% Similarity=0.128 Sum_probs=60.8
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh-HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY-RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
.|.+|||+|+|.+|..-++.+...|+ .|.+++.... ..+.+.+.|--..+. + ++.. .. -.++|+||
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~---~--~~~~--~d-----l~~~~lVi 74 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA---R--CFDA--DI-----LEGAFLVI 74 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe---C--CCCH--HH-----hCCcEEEE
Confidence 46799999999999999999999999 5666655432 223333333111111 1 1111 01 14689999
Q ss_pred EcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768 260 DCAGFNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
-+++.++.-..+....+..|.++.+..
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEECC
Confidence 999987666677777778888776653
No 298
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.96 E-value=0.071 Score=46.35 Aligned_cols=82 Identities=18% Similarity=0.220 Sum_probs=47.9
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
+.++||+|+ |++|...+..+...|++.++...++.++.+. ..+++... .+..+- +..+..+.+.+..+..+.++|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 568999998 9999999998888999533333444444333 33444221 221111 1223333444443333445999
Q ss_pred EEEcCC
Q 020768 258 SFDCAG 263 (321)
Q Consensus 258 vid~~g 263 (321)
+|.+.|
T Consensus 85 li~~ag 90 (253)
T PRK08642 85 VVNNAL 90 (253)
T ss_pred EEECCC
Confidence 999876
No 299
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.099 Score=47.48 Aligned_cols=82 Identities=20% Similarity=0.264 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc----C-CC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----G-AD-NIVKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~----g-~~-~vi~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.|.+++|+|+ +++|..++..+...|+ .|+.+.++.++.+.+ +++ + .. ..+..+- +..+..+...++.+ .
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-E 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-h
Confidence 3689999999 9999999998888998 577777776654432 222 1 11 1222221 12222333333322 2
Q ss_pred CCCccEEEEcCCC
Q 020768 252 GTGIDVSFDCAGF 264 (321)
Q Consensus 252 ~~~~d~vid~~g~ 264 (321)
.+.+|++|.+.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 4579999998874
No 300
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.95 E-value=0.1 Score=45.73 Aligned_cols=79 Identities=30% Similarity=0.301 Sum_probs=49.4
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCeEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
++||+|+ +++|...++.+...|+ .|+.+++++++.+.+ .+ .+-...+..+- +.++..+.+.++.+. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence 6899998 9999999998888999 577788877664433 22 23222222221 222333334443322 357999
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
+|.+.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9999884
No 301
>PRK08643 acetoin reductase; Validated
Probab=95.91 E-value=0.1 Score=45.51 Aligned_cols=81 Identities=21% Similarity=0.281 Sum_probs=49.9
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCCC-cccHHHHHHHHHHHhCCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~ 254 (321)
++++||+|+ |++|...++.+...|+ .|+.++++.++.+.+ .+ .+... .+..+-. .....+.+.++.+. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 568999998 9999999999988998 688887776654433 22 23221 1221111 12223333333322 357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 302
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.90 E-value=0.23 Score=43.16 Aligned_cols=77 Identities=18% Similarity=0.232 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.++++||+|+ |++|...+..+...|. .+++++++. ....+.. ..+..+- +..++.+.+.++.+ ..+.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLA-ETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 4678999998 9999999998888998 577776655 1222221 1222111 12233333333332 2356899
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999885
No 303
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.90 E-value=0.16 Score=45.24 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-------eEEecCCCcccHHHHHHHHHHHhC
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-------NIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-------~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
..+++||++|+|. |..+..+++......+.+++.+++-.+.++++-.. .-++.. ..|..+.+++ ..
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~--~~D~~~~l~~----~~ 143 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ--IDDGFKFLAD----TE 143 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE--ECchHHHHHh----CC
Confidence 3456999998855 44555666666566799999998887777653110 001110 1233333322 24
Q ss_pred CCccEEEEcCC----------CHHHHHHHHHHcccCCEEEEEc
Q 020768 253 TGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 253 ~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g 285 (321)
..+|+||-... ..+.++.+.+.|+++|.++...
T Consensus 144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 67999886433 2345678899999999999874
No 304
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.1 Score=45.71 Aligned_cols=82 Identities=24% Similarity=0.271 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc-----CCC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~-~vi~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.+.+++|+|+ +++|..+++.+...|+ .|+.+++++++.+.+ +++ +.. ..+..+- +..+..+.+.++.+.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA- 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 4678999998 9999999999999999 577777776655433 222 211 1222111 122333334443332
Q ss_pred CCCccEEEEcCCC
Q 020768 252 GTGIDVSFDCAGF 264 (321)
Q Consensus 252 ~~~~d~vid~~g~ 264 (321)
.+++|++|.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 3579999999884
No 305
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.19 Score=43.79 Aligned_cols=83 Identities=19% Similarity=0.348 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEE-EeCChhHHH-HHHHc---CCCe-EEecCC-CcccHHHHHHHHHHHh-
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVI-VDVDDYRLS-VAKEL---GADN-IVKVST-NLQDIAEEVEKIQKAM- 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~-v~~~~~~~~-~~~~~---g~~~-vi~~~~-~~~~~~~~~~~~~~~~- 251 (321)
.+.+++|+|+ |++|...++.+...|.+ +++ ..++.++.+ ...++ +... .+..+- +..+..+.++++.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~-v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGAL-VAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 3578999998 99999999988888984 544 455554433 22222 2221 222221 1223333333332221
Q ss_pred ----CCCccEEEEcCCC
Q 020768 252 ----GTGIDVSFDCAGF 264 (321)
Q Consensus 252 ----~~~~d~vid~~g~ 264 (321)
..++|++|.+.|.
T Consensus 84 ~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 84 IRVGTSEIDILVNNAGI 100 (254)
T ss_pred cccCCCCccEEEECCCC
Confidence 1468999998875
No 306
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.85 E-value=0.095 Score=47.47 Aligned_cols=108 Identities=16% Similarity=0.119 Sum_probs=72.9
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHH-HHHHcCCC--eEEecCCCcccHHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~-~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~ 249 (321)
.+...-....+++|+|+|..|.+.+..+.. .+.+.+.+.+++.++.+ +++++... .+. . .+..+.+
T Consensus 117 ~~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av----- 186 (304)
T PRK07340 117 ARTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP----- 186 (304)
T ss_pred HHHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh-----
Confidence 344444567899999999999998888864 68778888888887755 44555321 111 1 1222222
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT 296 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 296 (321)
.+.|+|+.|+++...+-.. .+++|-++..+|...+ ..++|..
T Consensus 187 ---~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~ 229 (304)
T PRK07340 187 ---EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELAPR 229 (304)
T ss_pred ---hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCCCCcccCCHH
Confidence 3689999999886543333 3799999999996644 4677765
No 307
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.85 E-value=0.17 Score=38.59 Aligned_cols=89 Identities=24% Similarity=0.256 Sum_probs=60.8
Q ss_pred EEEEEcCChhHHHHHHHHHHc--CCCeEEEEeCChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 184 NVLIMGAGPIGLVTMLGARAF--GAPRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~--g~~~vv~v~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
++.|+|+|..|.....-++.. +.+.+.+++.++++.+. .+++|.. .+ . ++.+.+. ...+|+|+.
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~----~~~~ll~------~~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--T----DLEELLA------DEDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--S----SHHHHHH------HTTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--h----HHHHHHH------hhcCCEEEE
Confidence 588999999998887666655 44334456777776664 5678876 22 1 2222222 247999999
Q ss_pred cCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768 261 CAGFNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
++....+.+.+..++..|- -+++--
T Consensus 69 ~tp~~~h~~~~~~~l~~g~-~v~~EK 93 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGK-HVLVEK 93 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTS-EEEEES
T ss_pred ecCCcchHHHHHHHHHcCC-EEEEEc
Confidence 9999888888888888776 445543
No 308
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.12 Score=45.76 Aligned_cols=82 Identities=22% Similarity=0.300 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcC-----CC-eEEecCCC-cccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG-----AD-NIVKVSTN-LQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g-----~~-~vi~~~~~-~~~~~~~~~~~~~~~ 251 (321)
++.++||+|+ |++|...++.+...|+ .|+.++++.++.+.. +++. .. .++..+-. ..+..+.+.+..+ .
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA-W 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH-H
Confidence 3689999998 9999999999999999 678787776554322 2221 11 12211111 1222233333322 2
Q ss_pred CCCccEEEEcCCC
Q 020768 252 GTGIDVSFDCAGF 264 (321)
Q Consensus 252 ~~~~d~vid~~g~ 264 (321)
.+++|++|.+.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 3578999999873
No 309
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.84 E-value=0.073 Score=47.31 Aligned_cols=108 Identities=20% Similarity=0.289 Sum_probs=67.5
Q ss_pred CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh----HHHHHHHcC-CC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY----RLSVAKELG-AD-NIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~----~~~~~~~~g-~~-~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
-.|+.|||+|+ +++|.+.++-...+|+ +++..|.+++ -.+..++.| +. ...|.+ +.++..+...++.+. -
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis-~~eei~~~a~~Vk~e-~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDIS-DREEIYRLAKKVKKE-V 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCC-CHHHHHHHHHHHHHh-c
Confidence 36899999988 8999888777777888 6777766643 334444445 22 233333 334555555555443 3
Q ss_pred CCccEEEEcCCCH----------H---------------HHHHHH-HHc-ccCCEEEEEcCCCCC
Q 020768 253 TGIDVSFDCAGFN----------K---------------TMSTAL-SAT-RAGGKVCLVGMGHLE 290 (321)
Q Consensus 253 ~~~d~vid~~g~~----------~---------------~~~~~~-~~l-~~~G~~v~~g~~~~~ 290 (321)
+.+|++++.+|-- + +.++.+ +++ +++|++|.+++..+.
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~ 177 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL 177 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc
Confidence 4799999988842 1 111222 233 477999999876553
No 310
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.83 E-value=0.13 Score=45.02 Aligned_cols=82 Identities=23% Similarity=0.284 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh--HHHHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~--~~~~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
.++++||+|+ +++|...++.+...|+ .|+.+.++.. ..+..++.+... .+..+- +.++..+.+.++.+. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCCC
Confidence 4789999998 9999999999999999 5666655432 123344455332 122221 223333444443332 3579
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|+++.+.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
No 311
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.83 E-value=0.11 Score=42.87 Aligned_cols=96 Identities=18% Similarity=0.198 Sum_probs=56.4
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh------------------hHH----HHHHHcCCCe-EEecCCCcccH
Q 020768 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD------------------YRL----SVAKELGADN-IVKVSTNLQDI 240 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~------------------~~~----~~~~~~g~~~-vi~~~~~~~~~ 240 (321)
+|+|.|+|++|...++.+...|...+..+|.+. .|. +.++++.... +..+.... +
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~- 78 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-D- 78 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-C-
Confidence 589999999999999999899998788887664 121 1233443322 21111110 1
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccC-CEEEEEc
Q 020768 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVG 285 (321)
Q Consensus 241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g 285 (321)
.+.+.++ -.++|+||||+.+.+.-....+.+... +.-+..+
T Consensus 79 ~~~~~~~----l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 79 ENNLEGL----FGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVCA 120 (174)
T ss_pred hhhHHHH----hcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 0112222 246999999988766555455554444 5444443
No 312
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.81 E-value=0.12 Score=45.24 Aligned_cols=81 Identities=15% Similarity=0.228 Sum_probs=49.3
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH----cCCCe--EEecCCC-cccHHHHHHHHHHHhC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGADN--IVKVSTN-LQDIAEEVEKIQKAMG 252 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~----~g~~~--vi~~~~~-~~~~~~~~~~~~~~~~ 252 (321)
++++||+|+ |++|...+..+...|+ .++.++++.++.+.. .+ .+... .+..+-. ..+..+.+.++.+. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 568999998 9999999998888898 677787776554332 22 22112 2222221 12223333333322 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 579999999873
No 313
>PRK05717 oxidoreductase; Validated
Probab=95.81 E-value=0.13 Score=44.97 Aligned_cols=82 Identities=26% Similarity=0.231 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~~d 256 (321)
.|.+++|+|+ |++|..++..+...|+ .|+.++++.++.+. .++++.. ..+..+-. ..+..+.+.++.+. .+.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ-FGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4678999998 9999999998888898 67777776654443 3445432 12222211 12233333443332 24699
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 314
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.80 E-value=0.12 Score=47.48 Aligned_cols=34 Identities=38% Similarity=0.550 Sum_probs=30.5
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~ 215 (321)
..+|+|.|+|++|..++..+...|...+..+|.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4789999999999999999999999888888875
No 315
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.13 Score=44.85 Aligned_cols=82 Identities=20% Similarity=0.147 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc---CCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~---g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...+..+...|+ .|+++++++++.+.+. ++ +.. ..+..+- +..+....+.+..+. .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER-FG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH-cC
Confidence 5688999998 9999999999999999 6788887776554332 22 322 1222221 122333333333222 34
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999999874
No 316
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.087 Score=45.04 Aligned_cols=77 Identities=27% Similarity=0.327 Sum_probs=50.1
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH-HhCCCccEEEE
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK-AMGTGIDVSFD 260 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~d~vid 260 (321)
++++|+|+ |++|...++.+...|+ .++.++++.++.+.++..+... +..+-.+. +.+.++.. ..+.++|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~D~~~~---~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEA-LALDVADP---ASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceE-EEecCCCH---HHHHHHHHHhcCCCCCEEEE
Confidence 47899998 9999999988888898 5888888877777666655432 22221111 12222211 12346999999
Q ss_pred cCCC
Q 020768 261 CAGF 264 (321)
Q Consensus 261 ~~g~ 264 (321)
+.|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 8775
No 317
>PLN02253 xanthoxin dehydrogenase
Probab=95.79 E-value=0.12 Score=45.89 Aligned_cols=82 Identities=21% Similarity=0.253 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHcCC--C-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~g~--~-~vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
.+.++||+|+ |++|...++.+...|+ .|++++++.++.+. ..+++. . ..+..+- +..+..+.+..+.+. .++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence 3678999998 9999999988888898 67777776655433 333432 1 1221111 122333333433332 357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 318
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.13 Score=44.79 Aligned_cols=82 Identities=15% Similarity=0.168 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...++.+...|. +|+.++++.++.+.+ ++ .+.. ..+..+- +..+..+.+.++.+. -+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER-HG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 3578999998 9999999999999998 688888876654433 22 2322 1222221 122333333343332 34
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 319
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.43 Score=42.06 Aligned_cols=79 Identities=24% Similarity=0.342 Sum_probs=47.8
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
+++|+|+ |++|...+..+...|. .|+.++++.++.+.+ +..+.+. .+..+- +..+..+.+..+.. ...++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence 6899998 9999999988888898 577777776654422 2223222 122211 11222233333322 235799
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
++|.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999884
No 320
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.77 E-value=0.14 Score=48.33 Aligned_cols=76 Identities=16% Similarity=0.222 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
-.+.+++|+|+|++|.+++..+...|+..+.++.++.+|.+ ++++++-..++.+ +.+.+. -..+|+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~----l~~aDiV 246 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQL----IKKADII 246 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHH----hccCCEE
Confidence 45789999999999999999999999888888888877654 4556652222221 112221 2458999
Q ss_pred EEcCCCHHH
Q 020768 259 FDCAGFNKT 267 (321)
Q Consensus 259 id~~g~~~~ 267 (321)
|.|++.+..
T Consensus 247 I~aT~a~~~ 255 (414)
T PRK13940 247 IAAVNVLEY 255 (414)
T ss_pred EECcCCCCe
Confidence 999998754
No 321
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.76 E-value=0.14 Score=47.11 Aligned_cols=34 Identities=35% Similarity=0.537 Sum_probs=30.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~ 215 (321)
+.+|+|.|+|++|..++..+...|...+..+|.+
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4689999999999999999999999888888775
No 322
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.14 Score=44.64 Aligned_cols=82 Identities=26% Similarity=0.330 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...++.+...|+ .|+.++++.++.+. +++.+... .+..+-. ..+..+.+.+..+. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-YG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence 4689999998 9999999988888898 58888887665432 23334321 2222211 12223333333222 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 323
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.11 Score=45.95 Aligned_cols=80 Identities=21% Similarity=0.202 Sum_probs=50.2
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.++||+|+ |++|...++.+...|. .|+++.++.++.+.+++ .+.. ..+..+- +.....+.+.++.+. ..++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA-LGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 57999998 9999999988888898 68888888776665543 3321 1112111 112223333333222 3578999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
No 324
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.74 E-value=0.14 Score=44.81 Aligned_cols=82 Identities=23% Similarity=0.274 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...++.+...|+ .|+.++++.++.+.+. ..+.. ..+..+- +.++..+.+.++.+. .+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 4689999998 9999999999988999 6788888776655433 22222 1222221 122333333333332 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|.+|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 325
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.73 E-value=0.41 Score=40.16 Aligned_cols=99 Identities=25% Similarity=0.287 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
.+.+++|+|+ |++|..++..+...|. .++.+.++.++.+.+. ++ +.. +...+. .+.. .+.+.. .+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----KG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----hc
Confidence 5679999998 9999988888888887 6777778877655433 23 222 111111 1111 122221 36
Q ss_pred ccEEEEcCCCHHHHHHHHH-HcccCCEEEEEcCCC
Q 020768 255 IDVSFDCAGFNKTMSTALS-ATRAGGKVCLVGMGH 288 (321)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~-~l~~~G~~v~~g~~~ 288 (321)
.|+||.+++.+........ ..+++-.++.+..+.
T Consensus 98 ~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~ 132 (194)
T cd01078 98 ADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVP 132 (194)
T ss_pred CCEEEECCCCCceechhhhcccCceeEEEEccCCC
Confidence 8999998886542112222 233333455555443
No 326
>PRK01581 speE spermidine synthase; Validated
Probab=95.73 E-value=0.27 Score=45.43 Aligned_cols=100 Identities=20% Similarity=0.143 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-C---------CeEEecCCCcccHHHHHHHHHH
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-A---------DNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~---------~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
...++|||+|+| .|..+..+++..+...|.+++-+++-.+.++++. . +.-+.. ...|..+.+..
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~v--vi~Da~~fL~~--- 222 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNV--HVCDAKEFLSS--- 222 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEE--EECcHHHHHHh---
Confidence 445799999964 4667777777666668999999999999988631 0 110110 01233333332
Q ss_pred HhCCCccEEEEcCCCH-----------HHHHHHHHHcccCCEEEEEcC
Q 020768 250 AMGTGIDVSFDCAGFN-----------KTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g~ 286 (321)
....+|+||--...+ +.+..+.+.|+++|.++.-..
T Consensus 223 -~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 223 -PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred -cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 245799988765332 357788999999999877653
No 327
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.73 E-value=0.16 Score=43.38 Aligned_cols=34 Identities=29% Similarity=0.413 Sum_probs=30.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~ 215 (321)
..+|+|.|+|++|..+++.+...|...+..+|.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4689999999999999999999999888888766
No 328
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.71 E-value=0.14 Score=44.75 Aligned_cols=82 Identities=17% Similarity=0.190 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH---HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS---VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~---~~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~ 254 (321)
.+.++||+|+ +++|...++.+...|+ .|+++.++++..+ ...+.+.. ..+..+-. ..+..+.+.++.+. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 4789999998 9999999999999999 5666666532222 22233422 12222222 22333333443332 357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 329
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.71 E-value=0.27 Score=42.44 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=46.6
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-H---HHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCCc
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-V---AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~---~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (321)
.++||+|+ |++|...+..+...|++.++...++.++.+ . ++..+.. ..+..+-. .....+.+.++.+ ..+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence 47899998 999999999888899853333445554433 2 2223322 12222211 2223333333322 24679
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|++|.+.|.
T Consensus 81 d~vi~~ag~ 89 (247)
T PRK09730 81 AALVNNAGI 89 (247)
T ss_pred CEEEECCCC
Confidence 999999985
No 330
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.70 E-value=0.14 Score=45.16 Aligned_cols=82 Identities=21% Similarity=0.278 Sum_probs=48.2
Q ss_pred CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.+.++||+|+ +++|...++.+...|+ .|+.+.++++..+.++ +.+....+..+- +.++..+.+.++.+. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH-W 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-h
Confidence 4678999984 5899999998888999 4665544432222222 334322222222 223333344444332 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+++|++|++.|-
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 579999999874
No 331
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.69 E-value=0.065 Score=47.83 Aligned_cols=96 Identities=19% Similarity=0.284 Sum_probs=68.7
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 262 (321)
.+|.|+|+|-+|.-++.+|.-+|+ .|...+.+.+|+..+..+-...+..+.....++.+.+ .+.|++|.++
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIgaV 239 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIGAV 239 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEEEE
Confidence 357788999999999999999999 6888999999999998744444333333333333322 3578888754
Q ss_pred CCH------HHHHHHHHHcccCCEEEEEcCC
Q 020768 263 GFN------KTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 263 g~~------~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
=-+ -..+..++.+++++.++.+..-
T Consensus 240 LIpgakaPkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 240 LIPGAKAPKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred EecCCCCceehhHHHHHhcCCCcEEEEEEEc
Confidence 221 1356778999999999999743
No 332
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.69 E-value=0.079 Score=47.52 Aligned_cols=95 Identities=21% Similarity=0.182 Sum_probs=59.7
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCC----CeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA----DNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~----~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
.+.+++|+|+|++|.+++..+...|++.+.+++++.+|.+.+ ++++. ..+... .+. .+. -..+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~----~~~----~~~----~~~a 193 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG----SDL----AAA----LAAA 193 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec----cch----Hhh----hCCC
Confidence 568999999999999999999999998899999988776644 34421 112111 111 111 1458
Q ss_pred cEEEEcCCCHH----HHHHHHHHcccCCEEEEEcCC
Q 020768 256 DVSFDCAGFNK----TMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 256 d~vid~~g~~~----~~~~~~~~l~~~G~~v~~g~~ 287 (321)
|+||+|+...- ........++++..++.+-+.
T Consensus 194 DiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~ 229 (284)
T PRK12549 194 DGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYF 229 (284)
T ss_pred CEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeC
Confidence 99999964310 001112456666666655544
No 333
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.68 E-value=0.23 Score=42.98 Aligned_cols=82 Identities=20% Similarity=0.219 Sum_probs=47.6
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-HHHHHH---HcCCCeE-EecCC-CcccHHHHHHHHHHHhCCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RLSVAK---ELGADNI-VKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~~~~~~---~~g~~~v-i~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
+.++||+|+ |++|...++.+...|++.++...++.. +.+.++ +.+.... +..+- +..+..+.+.++.+. .++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 81 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-VGE 81 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hCC
Confidence 578899998 999999999999999953333433332 222232 3344322 11111 122333333333332 357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|+++.+.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 334
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.14 Score=44.44 Aligned_cols=82 Identities=23% Similarity=0.246 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HHHc--CCC-eEEecCCC-cccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL--GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~~~--g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~ 254 (321)
.+.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+. ..++ +.. ..+..+-. .....+.+.++.+. .++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 3678999998 9999999988888898 57777777655433 2222 221 22222221 12223333333322 357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 335
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.23 Score=44.14 Aligned_cols=102 Identities=18% Similarity=0.252 Sum_probs=59.7
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
+++++|+|+|++|...+..+. .|. .|+.++++.++.+.+ ++ .+... .+..+- +.++..+.+.++ +. .+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCC
Confidence 357888899999999888874 787 677777776654432 22 23221 222221 122333333333 21 3579
Q ss_pred cEEEEcCCCHH------------------HHHHHHHHcccCCEEEEEcCC
Q 020768 256 DVSFDCAGFNK------------------TMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 256 d~vid~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~ 287 (321)
|++|.+.|-.. .++.+...+..+|+++.+++.
T Consensus 78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 99999998421 133444555667777777644
No 336
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.67 E-value=0.076 Score=47.25 Aligned_cols=130 Identities=15% Similarity=0.187 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC---------CcccHHHHHHHHHHH
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST---------NLQDIAEEVEKIQKA 250 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~---------~~~~~~~~~~~~~~~ 250 (321)
-++.++++.|+|.+|+.++-.++..|+ .|-.-+....+.+..+.+|+...-..++ -+++|.+.-.++...
T Consensus 162 v~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 456778999999999999999999998 6666677778888888888754321111 122333333333222
Q ss_pred hCCCccEEEEcCCC---H--H-HHHHHHHHcccCCEEEEEcCC-CCCccc--cchhhhccceEEEEeeh
Q 020768 251 MGTGIDVSFDCAGF---N--K-TMSTALSATRAGGKVCLVGMG-HLEMTV--PLTPAAARYLIYSFLFH 310 (321)
Q Consensus 251 ~~~~~d~vid~~g~---~--~-~~~~~~~~l~~~G~~v~~g~~-~~~~~~--~~~~~~~k~~~i~g~~~ 310 (321)
.-.++|+||-+.=- + . .-...+..++||+.++.+... ++..+. +-......+++|.|-.+
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence 35689999986422 1 2 234777999999999999854 333222 22446788999999765
No 337
>PLN02823 spermine synthase
Probab=95.66 E-value=0.15 Score=46.82 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=63.2
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-C------eEEecCCCcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-D------NIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-~------~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
..++|||+|+|. |..+..+++..+...+.+++-+++-.++++++-. . .-+.+ ...|..+.+++ ...
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v--~~~Da~~~L~~----~~~ 175 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLEL--IINDARAELEK----RDE 175 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEE--EEChhHHHHhh----CCC
Confidence 457899998753 5556677777777789999999999999987432 1 00000 01233333322 356
Q ss_pred CccEEEEcCCC------------HHHHH-HHHHHcccCCEEEEEc
Q 020768 254 GIDVSFDCAGF------------NKTMS-TALSATRAGGKVCLVG 285 (321)
Q Consensus 254 ~~d~vid~~g~------------~~~~~-~~~~~l~~~G~~v~~g 285 (321)
.+|+||--... .+.++ .+.+.|+++|.++.-.
T Consensus 176 ~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q~ 220 (336)
T PLN02823 176 KFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQA 220 (336)
T ss_pred CccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEec
Confidence 79998864322 23455 7888999999987654
No 338
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.14 Score=44.67 Aligned_cols=81 Identities=25% Similarity=0.309 Sum_probs=49.8
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC--eEEecCCC-cccHHHHHHHHHHHhCCCcc
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~--~vi~~~~~-~~~~~~~~~~~~~~~~~~~d 256 (321)
+.++||+|+ |++|...+..+...|. .+++++++.++.+.+ +++.-. ..+..+-. ..+..+.+.++.+. .+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAE-RGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence 468999998 9999999988888898 577787877665433 333211 12222211 12222333333222 34699
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999974
No 339
>PLN03075 nicotianamine synthase; Provisional
Probab=95.64 E-value=0.12 Score=46.41 Aligned_cols=99 Identities=22% Similarity=0.248 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcC-----CCeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELG-----ADNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
.++++|+=+|+|+.++.++.+++.+ ....++.+|.+++..+.+++.- ...-+.+... |..+ .. ....
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~--Da~~----~~-~~l~ 194 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA--DVMD----VT-ESLK 194 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC--chhh----cc-cccC
Confidence 4789999999999999888888654 3347999999999888887633 2222222211 1111 10 0125
Q ss_pred CccEEEEcC------CC-HHHHHHHHHHcccCCEEEEEc
Q 020768 254 GIDVSFDCA------GF-NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 254 ~~d~vid~~------g~-~~~~~~~~~~l~~~G~~v~~g 285 (321)
++|+|+-.+ .. ...++.+.+.|++||.+++-.
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 799999875 22 357889999999999988765
No 340
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.64 E-value=0.14 Score=44.65 Aligned_cols=94 Identities=17% Similarity=0.212 Sum_probs=56.6
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~ 238 (321)
+.+|+|.|+|++|..+++.+...|...+..+|.+. .| .+.++++..+.-+......-
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i 103 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL 103 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 37899999999999999999999998888876442 11 12344455433222111111
Q ss_pred cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768 239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 280 (321)
+ .+.+.++ -.++|+||||..+.+.-..+-+.+...+.
T Consensus 104 ~-~~~~~~~----~~~~DlVvd~~D~~~~r~~ln~~~~~~~i 140 (240)
T TIGR02355 104 D-DAELAAL----IAEHDIVVDCTDNVEVRNQLNRQCFAAKV 140 (240)
T ss_pred C-HHHHHHH----hhcCCEEEEcCCCHHHHHHHHHHHHHcCC
Confidence 1 1122222 24689999999987654444444444443
No 341
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.63 E-value=0.13 Score=47.69 Aligned_cols=94 Identities=24% Similarity=0.193 Sum_probs=56.7
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~ 238 (321)
..+|+|+|+|++|..++..+...|...+..+|.+. .| .+.++++....-+......-
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i 107 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRL 107 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeec
Confidence 47899999999999999999999999888887553 12 22344555443322111111
Q ss_pred cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768 239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 280 (321)
+. +...++ -.++|+|+||..+...-..+-+.+...+.
T Consensus 108 ~~-~~~~~~----~~~~DvVvd~~d~~~~r~~~n~~c~~~~i 144 (355)
T PRK05597 108 TW-SNALDE----LRDADVILDGSDNFDTRHLASWAAARLGI 144 (355)
T ss_pred CH-HHHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 11 112222 24699999999875543333344444443
No 342
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.63 E-value=0.12 Score=40.58 Aligned_cols=97 Identities=23% Similarity=0.316 Sum_probs=59.7
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCC-eEEecCCCc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGAD-NIVKVSTNL 237 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~-~vi~~~~~~ 237 (321)
..+|+|.|+|++|...+..+-..|...+..+|... .| .+.++++.+. .+..+..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 46899999999999999999999998888887431 12 2233344432 2222211
Q ss_pred ccH-HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768 238 QDI-AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 238 ~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 285 (321)
++ .+...++. .++|+||+|+.+......+.+.+...+.-+..+
T Consensus 80 -~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~ 123 (135)
T PF00899_consen 80 -KIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFIDA 123 (135)
T ss_dssp -HCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEE
T ss_pred -ccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 11 12233322 368999999998666556666676666554444
No 343
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.16 Score=44.47 Aligned_cols=82 Identities=22% Similarity=0.276 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH---cCCCe-EEecCCC-cccHHHHHHHHHHHhCCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~ 254 (321)
.+.+++|+|+ |++|...+..+...|+ .|+.++++.+..+.+++ .+... .+..+-. ..+..+.+.++... .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 4678999998 9999999999988999 57777777654443332 23221 1222111 12233333333322 356
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999999883
No 344
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.18 Score=44.25 Aligned_cols=81 Identities=23% Similarity=0.341 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
+.++||+|+ |++|..+++.+...|. .|+++++++++.+.+ +..+... ++..+- +.....+.+.+..+. .++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 357999998 9999999999988998 688888776554322 2233321 121111 122233333333222 346
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 345
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.62 E-value=0.15 Score=45.08 Aligned_cols=81 Identities=20% Similarity=0.264 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+ ++ .+.. ..+..+-. ..+..+.+.++.+. .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 4688999998 9999999999989999 677777776554332 22 2322 11222211 12223333333222 35
Q ss_pred CccEEEEcCC
Q 020768 254 GIDVSFDCAG 263 (321)
Q Consensus 254 ~~d~vid~~g 263 (321)
++|++|.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 346
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.60 E-value=0.17 Score=43.84 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...++.+...|. .|+.++++.++...+. +.+.. ..+..+-. .....+.+.++.+. ..
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 3678999998 9999999999988998 5777777765544332 22322 22222221 22233333333322 35
Q ss_pred CccEEEEcCC
Q 020768 254 GIDVSFDCAG 263 (321)
Q Consensus 254 ~~d~vid~~g 263 (321)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 7899999997
No 347
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.15 Score=46.04 Aligned_cols=82 Identities=22% Similarity=0.307 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHc-----CCC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~-~vi~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.+.+++|+|+ |++|..+++.+...|+ .|+.+.++.++.+.+ +++ +.. ..+..+- +..+..+.+.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~- 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA- 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence 5689999998 9999999998888898 577777776654322 221 111 1222221 112233333333222
Q ss_pred CCCccEEEEcCCC
Q 020768 252 GTGIDVSFDCAGF 264 (321)
Q Consensus 252 ~~~~d~vid~~g~ 264 (321)
.+++|++|.+.|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 3469999999873
No 348
>PRK06720 hypothetical protein; Provisional
Probab=95.59 E-value=0.28 Score=40.34 Aligned_cols=82 Identities=22% Similarity=0.297 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-H---HcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+..++|+|+ +++|...+..+...|+ .|++++++.+..+.. + +.+... .+..+-. ..++.+.+.++.+ ..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~-~~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLN-AFS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 4778999998 8999999988888898 688887776554322 2 234332 2222221 1233333333322 235
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|+++.+.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 78999999884
No 349
>PRK08264 short chain dehydrogenase; Validated
Probab=95.57 E-value=0.076 Score=45.79 Aligned_cols=77 Identities=23% Similarity=0.279 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+.+++|+|+ |++|...++.+...|.++|+++.++.++.+. .+.. ..+..+-. +.. .+.++.+. -..+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~--~~~-~~~~~~~~-~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVT--DPA-SVAAAAEA-ASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCC--CHH-HHHHHHHh-cCCCCEE
Confidence 4678999998 9999999999999998557777777665432 2221 12221111 111 23333221 2458999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999886
No 350
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.56 E-value=0.17 Score=45.30 Aligned_cols=90 Identities=23% Similarity=0.285 Sum_probs=59.4
Q ss_pred EEEEEcCChhHHHH-HHHHHHcCCCeEEEEeCChhH--HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 184 NVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 184 ~vlI~Gag~vG~~a-~qla~~~g~~~vv~v~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
++.|+|+|.+|... ..+.+..+++.+.+++.++++ ++.++++|...... ++. .+.. ...+|+|++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e----~ll~--~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------GVD----GLLA--NPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------CHH----HHhc--CCCCCEEEE
Confidence 68899999999855 555555566545556655544 46778888654321 111 1111 246999999
Q ss_pred cCCCHHHHHHHHHHcccCCEEEEEc
Q 020768 261 CAGFNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g 285 (321)
+++...+.+.+..++..|=.++...
T Consensus 71 aTp~~~H~e~a~~al~aGk~VIdek 95 (285)
T TIGR03215 71 ATSAKAHARHARLLAELGKIVIDLT 95 (285)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEECC
Confidence 9999888888887777766655443
No 351
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.55 E-value=0.43 Score=41.04 Aligned_cols=82 Identities=22% Similarity=0.270 Sum_probs=46.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-HHH-H---HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RLS-V---AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~~~-~---~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~ 252 (321)
.+.++||+|+ |++|...+..+...|++ |+++.++.+ +.+ . ++..+... .+..+-. .....+.+.++.+. .
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-F 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 3568999998 99999999999989995 544444433 222 2 22223221 2211211 12222333333221 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
.++|.+|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 468999998874
No 352
>PRK12743 oxidoreductase; Provisional
Probab=95.55 E-value=0.16 Score=44.46 Aligned_cols=81 Identities=21% Similarity=0.226 Sum_probs=48.2
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHH----HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS----VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~----~~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
++++||+|+ +++|..+++.+...|++ |+.+ .++.++.+ .++..+.. ..+..+-. ..+..+.+.++.+. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 468999998 99999999999999995 5554 44444332 22334532 22222221 22233333443332 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 353
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.55 E-value=0.045 Score=48.87 Aligned_cols=122 Identities=21% Similarity=0.177 Sum_probs=71.6
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCCeE-EecCCCcccHHHHHHHHHHHhCC-Ccc
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNI-VKVSTNLQDIAEEVEKIQKAMGT-GID 256 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~-~~d 256 (321)
.+|++++|+|+|+.+.+++.-++..|+.++.++.++.+|.+.+. .++.... +.... ...+ ... .+|
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~--------~~~~---~~~~~~d 192 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA--------LADL---EGLEEAD 192 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc--------cccc---ccccccC
Confidence 46899999999999999999999999888999999888866554 4442211 00000 0011 012 489
Q ss_pred EEEEcCCCHHHHHH-----HHHHcccCCEEEEEcCCCCCccccchh-hhccc-eEEEEeehhHHH
Q 020768 257 VSFDCAGFNKTMST-----ALSATRAGGKVCLVGMGHLEMTVPLTP-AAARY-LIYSFLFHFFLI 314 (321)
Q Consensus 257 ~vid~~g~~~~~~~-----~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~k~-~~i~g~~~~~~~ 314 (321)
++|++++-.-.... ....+++.-.++.+-+...+ .++-. .-.++ .++-|.-|..++
T Consensus 193 liINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~--TplL~~A~~~G~~~idGl~Mlv~Q 255 (283)
T COG0169 193 LLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLE--TPLLREARAQGAKTIDGLGMLVHQ 255 (283)
T ss_pred EEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCC--CHHHHHHHHcCCeEECcHHHHHHH
Confidence 99998875311110 03555665555555544322 22222 22223 366666665554
No 354
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.54 E-value=0.18 Score=44.00 Aligned_cols=82 Identities=29% Similarity=0.349 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-HcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
.+.++||+|+ |++|...++.+...|. .|+.++++.++.+.+. +++.. ..+..+- +..+..+.+.++.+. .+.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 3678999998 9999999999999999 6888888877665443 34422 1122211 122333333443332 35799
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 355
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.53 E-value=0.16 Score=43.56 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=38.8
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh----------hHHHHHHHcC
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD----------YRLSVAKELG 226 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~----------~~~~~~~~~g 226 (321)
.|.+|+|.|.|.+|..+++++...|.+.|.+++++. +..+..++.+
T Consensus 22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 578999999999999999999999997777788777 7777666554
No 356
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.52 E-value=0.36 Score=41.56 Aligned_cols=81 Identities=28% Similarity=0.351 Sum_probs=47.6
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHHHHH-H---cCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVAK-E---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~~~~-~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
+.++||+|+ |++|...+..+...|+ .++.+ +++.++.+.+. . .+... ++..+-. ..+..+.+..+.+. .+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK-FG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence 468999998 9999998888878898 46666 77766544322 2 22211 2222211 12222333333222 24
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 357
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.52 E-value=0.055 Score=48.35 Aligned_cols=97 Identities=22% Similarity=0.225 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
..+.+++|+|+|++|.+++..+...|+..|.++.++.++.+.+ ++++....+.+.. +.. + .-..+|+|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~---~~~----~----~~~~~Div 189 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL---ELQ----E----ELADFDLI 189 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc---cch----h----ccccCCEE
Confidence 3567899999999999999999999976899999988776544 4444211011100 000 1 12468999
Q ss_pred EEcCCCHHHH-----HHHHHHcccCCEEEEEcCC
Q 020768 259 FDCAGFNKTM-----STALSATRAGGKVCLVGMG 287 (321)
Q Consensus 259 id~~g~~~~~-----~~~~~~l~~~G~~v~~g~~ 287 (321)
|+|++....- ......++++..++.+-+.
T Consensus 190 InaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~ 223 (278)
T PRK00258 190 INATSAGMSGELPLPPLPLSLLRPGTIVYDMIYG 223 (278)
T ss_pred EECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence 9998753210 1223567777777777654
No 358
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.2 Score=43.78 Aligned_cols=82 Identities=16% Similarity=0.276 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh-H-HHH---HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-R-LSV---AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~-~-~~~---~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.+.++||+|+ +++|..+++.+...|+ .+++++++.+ . .+. ++..+... .+..+- +..+..+.+.++.+. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 4679999998 9999999999999999 5666666543 2 222 22334221 222221 122333334443332 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+.+|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 579999999984
No 359
>PRK08328 hypothetical protein; Provisional
Probab=95.50 E-value=0.22 Score=43.21 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=29.5
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~ 214 (321)
+.+|+|.|+|++|..++..+...|...+..+|.
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~ 59 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE 59 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 468999999999999999999999988888873
No 360
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.50 E-value=0.19 Score=44.02 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=56.7
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hHH----HHHHHcCCCeEEecCCCcc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRL----SVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~~----~~~~~~g~~~vi~~~~~~~ 238 (321)
..+|+|.|+|++|..++..+...|...+..+|.+. .|. +.++++..+.-+......-
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i 111 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL 111 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 47899999999999999999999998888886431 111 2334444432222111110
Q ss_pred cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEE
Q 020768 239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKV 281 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 281 (321)
+ .+...++ -..+|+||||+.+.+....+-+.+...+.-
T Consensus 112 ~-~~~~~~~----~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip 149 (245)
T PRK05690 112 D-DDELAAL----IAGHDLVLDCTDNVATRNQLNRACFAAKKP 149 (245)
T ss_pred C-HHHHHHH----HhcCCEEEecCCCHHHHHHHHHHHHHhCCE
Confidence 1 1112222 246999999999876544444544444433
No 361
>PLN02476 O-methyltransferase
Probab=95.49 E-value=0.23 Score=44.25 Aligned_cols=107 Identities=21% Similarity=0.244 Sum_probs=71.4
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
.++.+.++||=+|. .+|+.++.+|+.++ -..+++++.+++..+.++ +.|..+-+.... .+..+.+.++....
T Consensus 114 ~~~~~ak~VLEIGT-~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~~~~ 190 (278)
T PLN02476 114 VQILGAERCIEVGV-YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMIQNG 190 (278)
T ss_pred HHhcCCCeEEEecC-CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcc
Confidence 45567889998886 44777777787763 226899999998877764 567654333222 34455555543221
Q ss_pred -CCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcC
Q 020768 252 -GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 252 -~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 286 (321)
...||+||--.... ..++.+++.|++||.++.=..
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DNv 229 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNV 229 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 35799988765542 457888999999999886653
No 362
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.49 E-value=0.34 Score=40.33 Aligned_cols=101 Identities=19% Similarity=0.283 Sum_probs=64.8
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
+....+.++++||=+|+|. |..++.+++......+++++.+++..+.+++ ++...+-.... +... .
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~---~--- 93 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI---E--- 93 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh---h---
Confidence 3556777889988888754 6666777776543479999999987776653 44433221111 1110 1
Q ss_pred HhCCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768 250 AMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 250 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|+|+..... ...+..+.+.|+++|+++...
T Consensus 94 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~ 131 (187)
T PRK08287 94 -LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF 131 (187)
T ss_pred -cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEEE
Confidence 13469999864321 346778899999999987754
No 363
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.21 Score=43.30 Aligned_cols=80 Identities=23% Similarity=0.284 Sum_probs=49.1
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-c-----CCC-eEEecCCC-cccHHHHHHHHHHHhC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-L-----GAD-NIVKVSTN-LQDIAEEVEKIQKAMG 252 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~-~-----g~~-~vi~~~~~-~~~~~~~~~~~~~~~~ 252 (321)
+.+++|+|+ |++|...++.+...|. .|+.+++++++.+.+.. + +.. ..+..+-. ..+..+.+.++... .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE-L 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 468999998 9999988888888898 67777787766543321 1 211 12222211 22333333433322 3
Q ss_pred CCccEEEEcCC
Q 020768 253 TGIDVSFDCAG 263 (321)
Q Consensus 253 ~~~d~vid~~g 263 (321)
+++|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 57999999987
No 364
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.18 Score=44.19 Aligned_cols=79 Identities=27% Similarity=0.334 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc----CCC-eEEecCCCcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~----g~~-~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ +++|...++.+...|+ .|++++++.++.+.+. ++ +.. ..+..+- .+. +.+.++.+. -+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~-~~~~~~~~~-~g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDL--SSP-EAREQLAAE-AG 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC--CCH-HHHHHHHHH-hC
Confidence 4689999998 9999999998888999 6888888776654322 22 221 1222221 121 223332222 25
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|++|.+.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 365
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.48 E-value=0.27 Score=44.13 Aligned_cols=132 Identities=20% Similarity=0.280 Sum_probs=75.4
Q ss_pred CCcEEECCCCCChhhhccchhhHHHHHHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH-
Q 020768 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE- 224 (321)
Q Consensus 146 ~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~- 224 (321)
...++.+.+++.|-....-.+.. .+.+++. ..++|.+||=+|+|. |.+++. |..+|+..++++|-++...+.+++
T Consensus 129 ~~~~i~lDPGlAFGTG~HpTT~l-cL~~Le~-~~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~DiDp~AV~aa~eN 204 (300)
T COG2264 129 DELNIELDPGLAFGTGTHPTTSL-CLEALEK-LLKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVDIDPQAVEAAREN 204 (300)
T ss_pred CceEEEEccccccCCCCChhHHH-HHHHHHH-hhcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEecCCHHHHHHHHHH
Confidence 45667777777554322111111 1233333 345899998888844 555554 345788889999999876666553
Q ss_pred ---cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCCCC
Q 020768 225 ---LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 225 ---~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
-+....+... .........++.+|+|+-+.=.. ...+.+...++++|++++-|....
T Consensus 205 a~~N~v~~~~~~~--------~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 205 ARLNGVELLVQAK--------GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred HHHcCCchhhhcc--------cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 2232100000 00000011145799999654321 245677789999999999996543
No 366
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.19 Score=44.65 Aligned_cols=82 Identities=29% Similarity=0.350 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+ ++ .+... .+..+- +..+..+.+.+..+. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-LG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence 4678999998 9999999999989999 577777776554432 22 23321 122221 122333333333322 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|++|.+.|-
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 69999999883
No 367
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.47 E-value=0.42 Score=43.54 Aligned_cols=113 Identities=18% Similarity=0.132 Sum_probs=69.9
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHH-HcCCCeEEEEeCChhHHH-HHHHc---CCCeEEecCCCcccHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKEL---GADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~-~~g~~~vv~v~~~~~~~~-~~~~~---g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
+...-....+++|+|+|..|...+..+. ..+...|.+.+++.++.+ +++++ |.. +... .+..+.+
T Consensus 118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~~~~av----- 187 (314)
T PRK06141 118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TDLEAAV----- 187 (314)
T ss_pred HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CCHHHHH-----
Confidence 4444456789999999999999886444 467778889888877755 44444 322 1111 1111111
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccchhhhccc
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLTPAAARY 302 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~k~ 302 (321)
.+.|+|+.+++.+..+ ---+.++++-.+..+|.... ..+++.. ++.+.
T Consensus 188 ---~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~~~~~~El~~~-~~~~a 236 (314)
T PRK06141 188 ---RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGNFTPDMRECDDE-AIRRA 236 (314)
T ss_pred ---hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCCCcccccCCHH-HHhcC
Confidence 3589999988875321 11267888888888885433 3456644 33344
No 368
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.47 E-value=0.14 Score=42.55 Aligned_cols=95 Identities=20% Similarity=0.254 Sum_probs=59.3
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
++++||=+|+|. |..++.+++......|++++.+++..++++ +.+.+.+..... +..+ +. ....+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~~~----~~--~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RAED----FQ--HEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---chhh----cc--ccCCcc
Confidence 378888888743 455556565554347999999987665543 456543322211 2111 11 135799
Q ss_pred EEEEcCC-C-HHHHHHHHHHcccCCEEEEEc
Q 020768 257 VSFDCAG-F-NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 257 ~vid~~g-~-~~~~~~~~~~l~~~G~~v~~g 285 (321)
+|+-..- . +..++.+.+.|+++|+++..-
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~~ 142 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVGGYFLAYK 142 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCCCEEEEEc
Confidence 9886531 1 346677889999999999874
No 369
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.15 Score=44.36 Aligned_cols=78 Identities=22% Similarity=0.197 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+.++||+|+ |++|...++.+...|. .|+.++++.++ +..+.. ..+..+- +..+..+.+..+.+. .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4789999998 9999999999988999 57777777654 112211 1222221 122333333333332 357899
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999873
No 370
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.46 E-value=0.24 Score=44.26 Aligned_cols=98 Identities=17% Similarity=0.156 Sum_probs=66.0
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc-CCCeEEecCCC----cccHHHHHHHHHHHhCCCccE
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GADNIVKVSTN----LQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~-g~~~vi~~~~~----~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+|||+|+|. |-.+-.++++....+++.++-+++-.++++++ +....-..+.+ ..|-.+.+++ ...++|+
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~----~~~~fDv 152 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRD----CEEKFDV 152 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHh----CCCcCCE
Confidence 5999997543 55666788888888999999999999999873 32221111111 1233344433 2347999
Q ss_pred EEEcCCC----------HHHHHHHHHHcccCCEEEEEc
Q 020768 258 SFDCAGF----------NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 258 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 285 (321)
+|--+.. .+.++.+.++|+++|.++.-+
T Consensus 153 Ii~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q~ 190 (282)
T COG0421 153 IIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQA 190 (282)
T ss_pred EEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEec
Confidence 8864433 356889999999999998874
No 371
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.45 E-value=0.18 Score=43.55 Aligned_cols=98 Identities=24% Similarity=0.297 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
-+|.+||=.|||+ |+++.-+|+ +|+ .|.++|-+++-.+.++......-+..+.. ... +.++.. .++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~-~~~---~edl~~-~~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYR-QAT---VEDLAS-AGGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccch-hhh---HHHHHh-cCCCccEEE
Confidence 3788898889854 566666655 567 79999999999998885443322221111 122 223322 247899997
Q ss_pred E-----cCCCHH-HHHHHHHHcccCCEEEEEc
Q 020768 260 D-----CAGFNK-TMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 260 d-----~~g~~~-~~~~~~~~l~~~G~~v~~g 285 (321)
. .+..++ .+..+.++++|+|.+++--
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 5 455544 5668999999999877654
No 372
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.45 E-value=0.37 Score=45.26 Aligned_cols=106 Identities=24% Similarity=0.303 Sum_probs=60.1
Q ss_pred CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-------HHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-------VAKELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-------~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
+...+.+|||+|+ |.+|..++..+...|. .|++++++.++.+ ......-..++..+-. + .+.+.++.+
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~--d-~~~l~~~~~ 131 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVT--D-ADSLRKVLF 131 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCC--C-HHHHHHHHH
Confidence 3456779999998 9999999999988998 5777777654321 1112211122222111 1 122333322
Q ss_pred HhCCCccEEEEcCCCH-----H-------HHHHHHHHcccC--CEEEEEcCC
Q 020768 250 AMGTGIDVSFDCAGFN-----K-------TMSTALSATRAG--GKVCLVGMG 287 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~-----~-------~~~~~~~~l~~~--G~~v~~g~~ 287 (321)
..+.++|+||.|.+.. + ....+++.+... ++++.++..
T Consensus 132 ~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 132 SEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred HhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 1122799999988642 0 122344544443 478888754
No 373
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.44 E-value=0.24 Score=43.52 Aligned_cols=97 Identities=23% Similarity=0.273 Sum_probs=68.0
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHc-CCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+.....+++++||=+|+|. |..+..+++.. +. .+++++.+++-.+.+++.+.+.+. .+. .++. ..
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~----~~~~--~~ 87 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDV----RDWK--PK 87 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cCh----hhCC--CC
Confidence 4556678889999899865 67777888775 44 799999999998888876654321 111 1111 13
Q ss_pred CCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEE
Q 020768 253 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV 284 (321)
Q Consensus 253 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~ 284 (321)
..||+|+-... . ...+..+.+.|++||++++.
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 57999997442 2 34677888999999999875
No 374
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.44 E-value=0.17 Score=42.74 Aligned_cols=99 Identities=15% Similarity=0.197 Sum_probs=62.0
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
+.....++.+||-+|+|. |..+..+++. |. .|++++.+++-.+.+++ .+...+.... .++. ++.
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~---~d~~----~~~-- 91 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTAV---VDLN----NLT-- 91 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEEe---cChh----hCC--
Confidence 334556778999999865 6777778775 66 79999999877666553 2332111100 1111 110
Q ss_pred hCCCccEEEEcCC----C----HHHHHHHHHHcccCCEEEEEc
Q 020768 251 MGTGIDVSFDCAG----F----NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 251 ~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|+|+.... . ...+..+.+.|+++|.++.+.
T Consensus 92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1346999997533 1 246778889999999965543
No 375
>PRK04266 fibrillarin; Provisional
Probab=95.44 E-value=0.36 Score=41.72 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=60.8
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC--CCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+...+++|++||=.|+|. |..+..+++..+...|++++.+++..+.+.+.- ...+.....+..+.. ....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~-~~~~l----~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE-RYAHV----V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc-hhhhc----c
Confidence 557899999988888743 444555666654337999999997766443221 111211111111110 00111 2
Q ss_pred CCccEEEEcCCCHH----HHHHHHHHcccCCEEEE
Q 020768 253 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCL 283 (321)
Q Consensus 253 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~ 283 (321)
..+|+++-....+. .++.+.+.|++||+++.
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI 174 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLL 174 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEE
Confidence 34999995444332 36788889999999988
No 376
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.43 E-value=0.19 Score=37.55 Aligned_cols=89 Identities=18% Similarity=0.271 Sum_probs=59.3
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.|.+|||+|+|.+|..-++.+...|+ .+.+++... +..+ +.-.... ..+.+ .-.++|+|+-
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~ 66 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA 66 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence 47899999999999999999999998 577776664 2222 2212221 11111 1356899999
Q ss_pred cCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768 261 CAGFNKTMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+.+++..-+.+....+..|.++.+....
T Consensus 67 at~d~~~n~~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 67 ATDDPELNEAIYADARARGILVNVVDDP 94 (103)
T ss_dssp -SS-HHHHHHHHHHHHHTTSEEEETT-C
T ss_pred cCCCHHHHHHHHHHHhhCCEEEEECCCc
Confidence 9998776667777788899999887543
No 377
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.43 E-value=0.22 Score=43.47 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChh--HHHHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~--~~~~~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
.|.++||+|+ |++|...++.+...|+ .|+.++.+.. ..+.+++.+... .+..+- +.++..+.+.++.+. .+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence 3679999998 9999999999999999 5666654432 223334444321 122221 122333344444332 3579
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|++|.+.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999884
No 378
>PRK07574 formate dehydrogenase; Provisional
Probab=95.39 E-value=0.15 Score=47.76 Aligned_cols=89 Identities=21% Similarity=0.276 Sum_probs=58.4
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.|.+|.|+|.|.+|...++.++.+|. .|.+.+++....+..+.+|+... .+ +.++. ...|+|+.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~-------~~----l~ell----~~aDvV~l 254 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH-------VS----FDSLV----SVCDVVTI 254 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec-------CC----HHHHh----hcCCEEEE
Confidence 46789999999999999999999999 68888877644444445553211 11 22221 34678877
Q ss_pred cCCCHHH----H-HHHHHHcccCCEEEEEc
Q 020768 261 CAGFNKT----M-STALSATRAGGKVCLVG 285 (321)
Q Consensus 261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g 285 (321)
+...... + ...+..++++..++.++
T Consensus 255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 255 HCPLHPETEHLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred cCCCCHHHHHHhCHHHHhcCCCCcEEEECC
Confidence 7764321 1 24566777777777766
No 379
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.38 E-value=0.26 Score=43.01 Aligned_cols=101 Identities=19% Similarity=0.199 Sum_probs=58.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+.+|||+|+ |.+|...+..+...|. .|+++.++.++.......+. -.++..+- .+..+.+.+ ..+.++|+|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~l~~---~~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADV--TEGSDKLVE---AIGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeC--CCCHHHHHH---HhhcCCCEE
Confidence 4578999998 9999999988888888 57777777665433221111 11221111 111112212 112479999
Q ss_pred EEcCCCHH-------------HHHHHHHHcccC--CEEEEEcCC
Q 020768 259 FDCAGFNK-------------TMSTALSATRAG--GKVCLVGMG 287 (321)
Q Consensus 259 id~~g~~~-------------~~~~~~~~l~~~--G~~v~~g~~ 287 (321)
|.+.|... ....+++.+... ++++.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 99876421 123445554433 688888754
No 380
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.37 E-value=0.18 Score=45.41 Aligned_cols=94 Identities=22% Similarity=0.229 Sum_probs=59.7
Q ss_pred CEEEEEcCChhHHH-HHHHHHHcCCCeEEEEeCChh--HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 183 TNVLIMGAGPIGLV-TMLGARAFGAPRIVIVDVDDY--RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 183 ~~vlI~Gag~vG~~-a~qla~~~g~~~vv~v~~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
-++.|+|.|.+|.. +..+.+.-+.+.+.+++.+++ .+++++++|..... .++.+.+.. .....+|+||
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~---~~~~dIDiVf 75 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAM---PEFDDIDIVF 75 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhC---cCCCCCCEEE
Confidence 47899999999986 444444446655555666554 34667888864321 122222211 0125699999
Q ss_pred EcCCCHHHHHHHHHHcccCCEEEEEc
Q 020768 260 DCAGFNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~G~~v~~g 285 (321)
++++...+.+.+..++..|-.++...
T Consensus 76 ~AT~a~~H~e~a~~a~eaGk~VID~s 101 (302)
T PRK08300 76 DATSAGAHVRHAAKLREAGIRAIDLT 101 (302)
T ss_pred ECCCHHHHHHHHHHHHHcCCeEEECC
Confidence 99998877777777777766666655
No 381
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.36 E-value=0.077 Score=45.62 Aligned_cols=106 Identities=16% Similarity=0.147 Sum_probs=61.9
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEe-------cCCCccc-HHHHHHHH
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVK-------VSTNLQD-IAEEVEKI 247 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~-------~~~~~~~-~~~~~~~~ 247 (321)
....++.+||+.|+|. |.-++.+|. .|+ .|++++-++...+.+ ++.+...... +....-+ +...+.++
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 3446778999999854 677777775 798 699999999887764 3444321100 0000000 00001111
Q ss_pred HHHhCCCccEEEEcCC--------CHHHHHHHHHHcccCCEEEEEc
Q 020768 248 QKAMGTGIDVSFDCAG--------FNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g 285 (321)
.......+|.|+|..- ....+..+.++|++||+++++.
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~ 155 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT 155 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 1011246899998552 1245888999999999755543
No 382
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.36 E-value=0.29 Score=43.41 Aligned_cols=102 Identities=15% Similarity=0.293 Sum_probs=60.3
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCe-EEecCCC
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADN-IVKVSTN 236 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~-vi~~~~~ 236 (321)
.+.+|+|.|+|++|..++..+-..|...+..+|.+. .| .+.++++.++. +..++..
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 457899999999999999999999987888887541 11 12233444332 2222111
Q ss_pred cccHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC-EEEEEcCC
Q 020768 237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGMG 287 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~ 287 (321)
- + .+...++ ....+|+||||..+...-..+.+.+...+ .++..|..
T Consensus 109 i-~-~e~~~~l---l~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 I-T-PDNVAEY---MSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred c-C-hhhHHHH---hcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 0 0 1122222 13469999999998555444555554444 45555544
No 383
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.21 Score=44.30 Aligned_cols=80 Identities=18% Similarity=0.254 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC---eEEecCC-CcccHHHHHHHHHHHhC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD---NIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~---~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
+.++||+|+ |++|...+..+...|+ .|++++++.++.+.+. ..+.. ..+..+- +.++..+ +.++.+. .
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-I 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-c
Confidence 568999998 9999999998888898 5777777766544332 22221 1222221 1222333 4333322 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 578999999874
No 384
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.35 E-value=0.34 Score=39.34 Aligned_cols=89 Identities=15% Similarity=0.105 Sum_probs=52.4
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.|.+|+|.|+|.+|..-++.+...|+. |.+++ ++..+.+++++.-... . ..+. +..-.++|+|+-
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~---~--~~~~-------~~dl~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVS--PEICKEMKELPYITWK---Q--KTFS-------NDDIKDAHLIYA 76 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc--CccCHHHHhccCcEEE---e--cccC-------hhcCCCceEEEE
Confidence 478999999999999988888888984 55553 3333334445421111 1 1111 111256899999
Q ss_pred cCCCHHHHHHHHHHcccCCEEEEEc
Q 020768 261 CAGFNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~G~~v~~g 285 (321)
++++++ .+..+..++..+.++...
T Consensus 77 aT~d~e-~N~~i~~~a~~~~~vn~~ 100 (157)
T PRK06719 77 ATNQHA-VNMMVKQAAHDFQWVNVV 100 (157)
T ss_pred CCCCHH-HHHHHHHHHHHCCcEEEC
Confidence 998754 454444443333344433
No 385
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.34 E-value=0.32 Score=41.21 Aligned_cols=34 Identities=26% Similarity=0.490 Sum_probs=30.0
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~ 215 (321)
..+|+|.|+|++|..+++.+...|...+..+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4789999999999999999999999778888766
No 386
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.32 E-value=0.31 Score=42.83 Aligned_cols=100 Identities=26% Similarity=0.275 Sum_probs=67.2
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHhC
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+....++++++||=+|+|. |..+..+++..+...+++++.+++..+.+++.-.. .++. .+.. .+. ..
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~~----~~~--~~ 91 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADIA----SWQ--PP 91 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cchh----ccC--CC
Confidence 3455678889999998854 66677888876544899999999988888764321 1222 1111 111 13
Q ss_pred CCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEc
Q 020768 253 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 253 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g 285 (321)
..+|+|+-... . ...+..+.+.|++||.+++..
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 47899886433 1 246888899999999988753
No 387
>PRK07069 short chain dehydrogenase; Validated
Probab=95.29 E-value=0.35 Score=41.87 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=59.2
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-hhHHHHH-HHc----CCCeE--E--ecCCCcccHHHHHHHHHHHhC
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVA-KEL----GADNI--V--KVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-~~~~~~~-~~~----g~~~v--i--~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+++|+|+ |++|...++.+...|+ .|++++++ .++.+.+ +++ +...+ + |.. +.+.+.+.+.++.+. .
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT-DEAQWQALLAQAADA-M 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecC-CHHHHHHHHHHHHHH-c
Confidence 3789988 9999999988888899 57777765 4444332 222 11111 1 222 223333333333322 3
Q ss_pred CCccEEEEcCCCHH-------------------------HHHHHHHHccc--CCEEEEEcCC
Q 020768 253 TGIDVSFDCAGFNK-------------------------TMSTALSATRA--GGKVCLVGMG 287 (321)
Q Consensus 253 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~ 287 (321)
+++|+++.+.|... ..+.++..++. .|+++.++..
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~ 139 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSV 139 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecCh
Confidence 56999999987421 22345555543 4789888854
No 388
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.28 E-value=0.48 Score=35.90 Aligned_cols=93 Identities=18% Similarity=0.153 Sum_probs=61.9
Q ss_pred EEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264 (321)
Q Consensus 185 vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 264 (321)
|+|.|.|.+|...++.++..+. .+++++.++++.+.+++.|.. ++.-+..+ .+.+++ .+-..+|.++-+.++
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~---a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLER---AGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHH---TTGGCESEEEEESSS
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhh---cCccccCEEEEccCC
Confidence 5788999999999999999664 799999999999999988854 44322222 222332 233568999988887
Q ss_pred HHHHH---HHHHHcccCCEEEEEc
Q 020768 265 NKTMS---TALSATRAGGKVCLVG 285 (321)
Q Consensus 265 ~~~~~---~~~~~l~~~G~~v~~g 285 (321)
+..-. ..++-+.+..+++...
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEE
Confidence 54322 2334455666766554
No 389
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.27 E-value=0.28 Score=42.32 Aligned_cols=82 Identities=23% Similarity=0.272 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~d 256 (321)
.+.++||+|+ |++|...+..+...|. .|+..+++.++.+.+ ..++... .+..+- +.....+.+.++.+. .+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 3679999998 9999999988888898 677776766655543 3444321 222221 122233333333322 35799
Q ss_pred EEEEcCCC
Q 020768 257 VSFDCAGF 264 (321)
Q Consensus 257 ~vid~~g~ 264 (321)
.+|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999884
No 390
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.18 Score=44.11 Aligned_cols=76 Identities=20% Similarity=0.229 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCC-cccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~-~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.|.++||+|+ |++|...++.+...|+ .|++++++.++. .+.. ..+..+-. ..+..+.+.++.+. .+++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLER-LGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4789999998 9999999999888999 577777765432 1111 11221111 12222233333222 357999
Q ss_pred EEEcCC
Q 020768 258 SFDCAG 263 (321)
Q Consensus 258 vid~~g 263 (321)
+|.+.|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999987
No 391
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.24 E-value=0.24 Score=43.46 Aligned_cols=81 Identities=16% Similarity=0.145 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHH-HHH----cCCC-eEEecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSV-AKE----LGAD-NIVKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~-~~~----~g~~-~vi~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.++++||+|+ +++|...+..+...|++ |+.+. ++.++.+. +++ .+.. ..+..+- +.++..+.+.++.+.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~- 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED- 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence 4789999998 99999999998899995 55553 44444332 222 2322 1222221 222333333433322
Q ss_pred CCCccEEEEcCC
Q 020768 252 GTGIDVSFDCAG 263 (321)
Q Consensus 252 ~~~~d~vid~~g 263 (321)
.+.+|+++.+.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 357999999885
No 392
>PRK12744 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.48 Score=41.37 Aligned_cols=83 Identities=18% Similarity=0.171 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC---hhHH-HH---HHHcCCCe-EEecCC-CcccHHHHHHHHHHH
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD---DYRL-SV---AKELGADN-IVKVST-NLQDIAEEVEKIQKA 250 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~---~~~~-~~---~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~ 250 (321)
.+.++||+|+ |++|...++.+...|++.++...+. .++. +. ++..+... .+..+- +.++..+.+.++.+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 3678999998 9999999999988999534333221 1222 12 22234321 122221 122223333333222
Q ss_pred hCCCccEEEEcCCC
Q 020768 251 MGTGIDVSFDCAGF 264 (321)
Q Consensus 251 ~~~~~d~vid~~g~ 264 (321)
.+++|++|.+.|.
T Consensus 87 -~~~id~li~~ag~ 99 (257)
T PRK12744 87 -FGRPDIAINTVGK 99 (257)
T ss_pred -hCCCCEEEECCcc
Confidence 3579999999885
No 393
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.23 E-value=0.23 Score=42.91 Aligned_cols=92 Identities=24% Similarity=0.295 Sum_probs=55.8
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~ 238 (321)
..+|+|.|+|++|..++..+...|...+..+|.+. .| .+.++++..+.-+.... .
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~--~ 98 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN--E 98 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec--c
Confidence 57899999999999999999999998888775331 12 22334444432222111 1
Q ss_pred cH-HHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC
Q 020768 239 DI-AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG 279 (321)
Q Consensus 239 ~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G 279 (321)
.+ .+.+.++ -.++|+||+|..+...-..+-+.+...+
T Consensus 99 ~i~~~~~~~~----~~~~DvVi~~~d~~~~r~~l~~~~~~~~ 136 (228)
T cd00757 99 RLDAENAEEL----IAGYDLVLDCTDNFATRYLINDACVKLG 136 (228)
T ss_pred eeCHHHHHHH----HhCCCEEEEcCCCHHHHHHHHHHHHHcC
Confidence 11 1222222 2469999999998765444444444444
No 394
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.22 E-value=0.5 Score=42.78 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=26.1
Q ss_pred CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEE
Q 020768 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVI 211 (321)
Q Consensus 181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~ 211 (321)
.|+++||+|+ .++|..+++.+...|++ |+.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~-Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAE-ILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCE-EEE
Confidence 4889999988 89999999999999994 555
No 395
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.22 E-value=0.46 Score=37.15 Aligned_cols=94 Identities=20% Similarity=0.280 Sum_probs=54.2
Q ss_pred EEEEcC-ChhHHHHHHHHHHcC--CCeEEEEeCCh--hH-HHHHHHcCCCeEEecCCCcccHHHHHHHHHH---------
Q 020768 185 VLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDD--YR-LSVAKELGADNIVKVSTNLQDIAEEVEKIQK--------- 249 (321)
Q Consensus 185 vlI~Ga-g~vG~~a~qla~~~g--~~~vv~v~~~~--~~-~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~--------- 249 (321)
|.|+|+ |.+|..++++.+... + .|++..... ++ .+.+++|.+..+...++ +..+.+++...
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence 578899 999999999999987 5 455544332 33 34567899888776442 22222222210
Q ss_pred --------H-hCCCccEEEEcCCCHHHHHHHHHHcccCCEEE
Q 020768 250 --------A-MGTGIDVSFDCAGFNKTMSTALSATRAGGKVC 282 (321)
Q Consensus 250 --------~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v 282 (321)
. ....+|+|+.+..+-..+...+..++.+=++.
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 0 12456777776666666666666666554443
No 396
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=95.22 E-value=0.29 Score=41.49 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=63.9
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
++.+||-+|+|. |..+..+++......+++++.+++..+.+++ .+...+-... .+..+.+... .....+|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD 113 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence 677888888865 6677777777644479999999988887754 2333222111 1221222211 1135689
Q ss_pred EEEEcCC--------------CHHHHHHHHHHcccCCEEEEEc
Q 020768 257 VSFDCAG--------------FNKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 257 ~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~g 285 (321)
.|+-... ....++.+.+.|+++|.+++..
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~ 156 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT 156 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence 8886432 2357889999999999998875
No 397
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.22 E-value=0.11 Score=48.80 Aligned_cols=95 Identities=19% Similarity=0.277 Sum_probs=65.0
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
.+.++||+|+|-+|.+++..+...|...+.++.++.+|.+ +++++|+..+ .++ + +... -..+|+||
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~DvVi 243 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADVVI 243 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCEEE
Confidence 5788999999999999999999999888888888877755 6788995432 221 1 1111 13589999
Q ss_pred EcCCCHHH---HHHHHHHcccCCE--EEEEcCCC
Q 020768 260 DCAGFNKT---MSTALSATRAGGK--VCLVGMGH 288 (321)
Q Consensus 260 d~~g~~~~---~~~~~~~l~~~G~--~v~~g~~~ 288 (321)
.+++.+.. -....+.++..-+ ++.++.+.
T Consensus 244 ssTsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 244 SSTSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred EecCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 99998642 2234444444333 45556553
No 398
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.20 E-value=0.27 Score=42.52 Aligned_cols=82 Identities=20% Similarity=0.222 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |.+|...+..+...|. .|++++++.++... ++..+... ++..+-. ..+..+.+.++... ..
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED-FG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence 4678999998 9999999988888898 68888777554332 22233221 2221111 12222233333221 24
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|++|.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998865
No 399
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.18 E-value=0.29 Score=42.75 Aligned_cols=82 Identities=18% Similarity=0.242 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ +++|...+..+...|+ .++.++++.++.+.+ ++.+.+. .+..+-. ..+..+.+..+.+. .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK-LG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 3789999998 9999999998888999 566677666554432 2223221 2222211 12223333333322 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 68999999873
No 400
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.18 E-value=0.74 Score=33.53 Aligned_cols=85 Identities=22% Similarity=0.272 Sum_probs=53.1
Q ss_pred EEEEEcCChhHHHHHHHHHHcC---CCeEE-EEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 184 NVLIMGAGPIGLVTMLGARAFG---APRIV-IVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g---~~~vv-~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
+|.|+|+|.+|.+.+.-....| . .+. +.++++++.+.+ +++++.... .+..+.++ ..|+|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~--------~advv 65 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ--------EADVV 65 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH--------HTSEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc--------cCCEE
Confidence 5778899999999999888888 6 455 558888887765 566643321 12222222 36999
Q ss_pred EEcCCCHHHHHHHHHH---cccCCEEEEE
Q 020768 259 FDCAGFNKTMSTALSA---TRAGGKVCLV 284 (321)
Q Consensus 259 id~~g~~~~~~~~~~~---l~~~G~~v~~ 284 (321)
|-|+..+ .+...++. +.++..++.+
T Consensus 66 ilav~p~-~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 66 ILAVKPQ-QLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp EE-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred EEEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence 9999964 44444433 4455555544
No 401
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.17 E-value=0.48 Score=42.39 Aligned_cols=114 Identities=13% Similarity=0.163 Sum_probs=71.0
Q ss_pred CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-----HHcCCC---eEEecCCCcccHHHHHHHHHHH
Q 020768 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-----KELGAD---NIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-----~~~g~~---~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
+-|++.+|+|+ .++|...+.-+-..|+ +|+.+.++.+|++.. ++.++. .++|+...+.++.+ +++. .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~-i~~~--l 122 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEK-LLEK--L 122 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHH-HHHH--h
Confidence 45789999999 8999766655555999 589999999987654 344432 23455444433333 3332 2
Q ss_pred hCCCccEEEEcCCCHH---------------------------HHHHHH-HHc-ccCCEEEEEcCCCCCccccchh
Q 020768 251 MGTGIDVSFDCAGFNK---------------------------TMSTAL-SAT-RAGGKVCLVGMGHLEMTVPLTP 297 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~---------------------------~~~~~~-~~l-~~~G~~v~~g~~~~~~~~~~~~ 297 (321)
.+..+-+.++++|-.. ..+..+ .++ +..|.++.+|...+..+.+...
T Consensus 123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s 198 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLS 198 (312)
T ss_pred cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHH
Confidence 3556778889888532 011111 223 3568999999877766666543
No 402
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.17 E-value=0.3 Score=42.33 Aligned_cols=85 Identities=20% Similarity=0.321 Sum_probs=52.9
Q ss_pred CCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe--EE--ecCC-CcccHHHHHHHH
Q 020768 178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN--IV--KVST-NLQDIAEEVEKI 247 (321)
Q Consensus 178 ~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~--vi--~~~~-~~~~~~~~~~~~ 247 (321)
+..++.+++|+|+ |++|...++.+...|+ .|++++++.++.+. +++.+... ++ +.+. ...+..+....+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3457889999998 9999999988888898 67788887655432 22333221 22 2221 123333334444
Q ss_pred HHHhCCCccEEEEcCCC
Q 020768 248 QKAMGTGIDVSFDCAGF 264 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~ 264 (321)
.+. .+.+|.+|.+.|.
T Consensus 87 ~~~-~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQ-FGRLDGVLHNAGL 102 (247)
T ss_pred HHH-hCCCCEEEECCcc
Confidence 332 3579999998764
No 403
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.16 E-value=0.18 Score=47.60 Aligned_cols=76 Identities=13% Similarity=0.237 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCC-eEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
.+++++|+|+ |++|...+..+...|. +|+++++++++.+.. ...+.. ..+..+- .+. +.+.+. -+++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv--sd~-~~v~~~----l~~IDi 248 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV--GQE-AALAEL----LEKVDI 248 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC--CCH-HHHHHH----hCCCCE
Confidence 4789999998 9999999998888898 677777776654322 111111 1222111 121 222222 246999
Q ss_pred EEEcCCC
Q 020768 258 SFDCAGF 264 (321)
Q Consensus 258 vid~~g~ 264 (321)
+|.+.|.
T Consensus 249 LInnAGi 255 (406)
T PRK07424 249 LIINHGI 255 (406)
T ss_pred EEECCCc
Confidence 9998774
No 404
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.21 Score=43.64 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=45.3
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
+.+++|+|+ |++|...++.+...|+ .|++++++. ++.+.... +....+..+-. +.. .+.+. -+++|++|
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~--~~~-~~~~~----~~~iDilV 84 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECG--KEE-SLDKQ----LASLDVLI 84 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCC--CHH-HHHHh----cCCCCEEE
Confidence 679999998 9999999998888999 577776665 22222111 11222222211 211 22221 24699999
Q ss_pred EcCCC
Q 020768 260 DCAGF 264 (321)
Q Consensus 260 d~~g~ 264 (321)
++.|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99975
No 405
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.15 E-value=0.74 Score=41.32 Aligned_cols=60 Identities=23% Similarity=0.384 Sum_probs=46.8
Q ss_pred HHHHHcCCCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe--CChhHHHHHHHcCCCeEEe
Q 020768 172 HACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNIVK 232 (321)
Q Consensus 172 ~~l~~~~~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~--~~~~~~~~~~~~g~~~vi~ 232 (321)
++.+...++||++| |=+. |..|...+.+|+++|++.++++. -+.+|+++++.+|+..+..
T Consensus 52 ~Ae~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 52 DAEKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HHHHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 34456779999944 4454 99999999999999997677664 4578999999999976654
No 406
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.12 E-value=0.31 Score=42.83 Aligned_cols=82 Identities=26% Similarity=0.290 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.+++|+|+ +++|...+..+...|+ .++.+++++++.+.+ ++.+... .+..+-. ..+..+.+.++.+. .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE-VG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence 5678999998 9999988888888899 477777776654432 2334322 2222221 12223333333222 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999885
No 407
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.10 E-value=0.16 Score=45.18 Aligned_cols=85 Identities=24% Similarity=0.216 Sum_probs=53.3
Q ss_pred CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCC----eEEecCCC-cccHHHHHHHHHH
Q 020768 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD----NIVKVSTN-LQDIAEEVEKIQK 249 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~----~vi~~~~~-~~~~~~~~~~~~~ 249 (321)
-.|..+||+|+ .++|...+..+...|+ +|+.+.+++++.+... ..+.. ..+..+-. .++..+.+....+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 35788999988 9999999999999999 6777878877654332 22222 11221111 2233333333322
Q ss_pred HhCCCccEEEEcCCCH
Q 020768 250 AMGTGIDVSFDCAGFN 265 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~ 265 (321)
...+++|+.+++.|..
T Consensus 85 ~~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGAL 100 (270)
T ss_pred HhCCCCCEEEEcCCcC
Confidence 2257799999988864
No 408
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.10 E-value=0.29 Score=42.49 Aligned_cols=81 Identities=25% Similarity=0.368 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCe-EEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
+.++||+|+ |.+|...+..+...|. .|++++++.++.+.+.+ .+... .+..+- +..++.+.+.++.+. ..+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence 357999998 9999999988888999 68888887766554432 22221 121111 122333333343332 356
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|-+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988864
No 409
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.08 E-value=0.24 Score=50.08 Aligned_cols=82 Identities=24% Similarity=0.357 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-H----cCCCeE--EecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E----LGADNI--VKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~----~g~~~v--i~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.++++||+|+ |++|...++.+...|+ .|++++++.++.+.+. + .+...+ +..+- +..+..+.+.++...
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~- 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA- 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh-
Confidence 3678999998 9999999998888999 6888888776654332 2 232221 22211 122333333333222
Q ss_pred CCCccEEEEcCCC
Q 020768 252 GTGIDVSFDCAGF 264 (321)
Q Consensus 252 ~~~~d~vid~~g~ 264 (321)
.+++|++|.+.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 3579999999984
No 410
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.05 E-value=0.33 Score=41.83 Aligned_cols=81 Identities=20% Similarity=0.343 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~ 254 (321)
+.+++|+|+ |++|...+..+...|+ .|+.+++++++.+.. +..+... .+..+-. ..+..+.++++.+ ..++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 84 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELGS 84 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence 578999998 9999999988888999 688888876654432 2223221 1222221 2223333333322 2357
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 9999998874
No 411
>PLN02244 tocopherol O-methyltransferase
Probab=95.04 E-value=0.45 Score=43.82 Aligned_cols=98 Identities=16% Similarity=0.219 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
+++++||=+|+|. |..+..+++..|. .|++++.+++..+.+++ .+...-+.+... |.. ++. ...+.|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~--D~~----~~~-~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVA--DAL----NQP-FEDGQF 187 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc--Ccc----cCC-CCCCCc
Confidence 7889998888854 5667788887787 79999999887766554 243211111100 110 010 113568
Q ss_pred cEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEcC
Q 020768 256 DVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 256 d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
|+|+-.-. + ...++.+.+.|++||++++...
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99986332 1 2467889999999999998753
No 412
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.02 E-value=0.28 Score=43.60 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCCCe-EEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 179 ~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
...+.+++|+|+|++|.+++..+...|. .+.+++++.++.+ +++++.... +... ... +. ....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~----~~---~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMD----EL---PLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chh----hh---cccCcc
Confidence 3457899999999999999988888898 6888888876654 344443211 1111 001 11 123589
Q ss_pred EEEEcCCCHH--HH---HHHHHHcccCCEEEEEcCCCC
Q 020768 257 VSFDCAGFNK--TM---STALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 257 ~vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~~ 289 (321)
+||+|++... .. ......++++..++.+.+...
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~ 218 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPG 218 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCC
Confidence 9999998631 01 112456778878887865543
No 413
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.02 E-value=0.14 Score=43.22 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=58.4
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
....++.+||-+|+|. |..+..+++ .|. .|+++|.+++-.+.+++ .+...... ..+.. ... ..
T Consensus 26 ~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~----~~d~~----~~~--~~ 92 (195)
T TIGR00477 26 VKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTD----AYDIN----AAA--LN 92 (195)
T ss_pred hccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeE----eccch----hcc--cc
Confidence 3445567888888844 666667776 476 79999999877766543 23321110 01111 110 12
Q ss_pred CCccEEEEcC-----CC---HHHHHHHHHHcccCCEEEEEc
Q 020768 253 TGIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 253 ~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g 285 (321)
..+|+|+... .. ...++.+.+.|++||.++.+.
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 4699998642 11 246778889999999966553
No 414
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.00 E-value=0.41 Score=42.05 Aligned_cols=95 Identities=23% Similarity=0.317 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
.++.+||=+|+|. |..+..+++. |. .|++++.+++..+.+++. |.. .+.... .+.. ++.......
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~----~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQ----DIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHH----HHhhhcCCC
Confidence 4567888888754 6777777775 66 799999999888877653 322 111111 1111 111112457
Q ss_pred ccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEE
Q 020768 255 IDVSFDCA-----GF-NKTMSTALSATRAGGKVCLV 284 (321)
Q Consensus 255 ~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~ 284 (321)
+|+|+... .. ...+..+.+.|+++|.++.+
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 99998542 22 24578899999999999765
No 415
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.99 E-value=0.3 Score=42.97 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=62.2
Q ss_pred CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCC---hhHHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVD---DYRLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~---~~~~~-~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.++++||+|+ +++|...++.+...|++ |+.+.+. .++.+ +.++++....+..+- +.++..+.+..+.+. .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH-W 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH-h
Confidence 4789999984 58999998888889994 6555332 33333 234445322222221 223334444444332 3
Q ss_pred CCccEEEEcCCCH---------------H---------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 253 TGIDVSFDCAGFN---------------K---------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 253 ~~~d~vid~~g~~---------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+.+|+++++.|.. + ..+.++..++.+|+++.++...
T Consensus 83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~ 148 (260)
T PRK06997 83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG 148 (260)
T ss_pred CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 5799999988641 0 1234455666679998887543
No 416
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.35 Score=42.28 Aligned_cols=83 Identities=20% Similarity=0.202 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHH---cCCCe-EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~---~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...+..+...|++.++...++.++.+ ..++ .+... .+..+-. ..+..+.+.+..+. .+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-LG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4678999999 999999988888899853343433443332 2222 23321 1222211 22233333333222 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 79999999874
No 417
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.18 Score=43.18 Aligned_cols=75 Identities=17% Similarity=0.329 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+.++||+|+ |++|...++.+...|. .|+++.++.++ .+.. .++..+- +.....+.+.++.+ ..++|++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~v 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAI 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEE
Confidence 3578999998 9999999999888998 67777776544 1111 2222211 12233333444433 2368999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.+.|.
T Consensus 73 i~~ag~ 78 (234)
T PRK07577 73 VNNVGI 78 (234)
T ss_pred EECCCC
Confidence 998874
No 418
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=94.97 E-value=0.62 Score=39.51 Aligned_cols=91 Identities=13% Similarity=0.168 Sum_probs=53.6
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hH-HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YR-LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~-~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.|.+|||+|+|.+|...+..+...|+ .|.+++... +. .+++.. +. + .+... .+.+ ..-.++|+|
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~--i-~~~~~--~~~~-------~~l~~adlV 74 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK--I-RWKQK--EFEP-------SDIVDAFLV 74 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC--E-EEEec--CCCh-------hhcCCceEE
Confidence 46899999999999999988888998 566665432 12 222222 21 1 11111 1110 112468999
Q ss_pred EEcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768 259 FDCAGFNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 259 id~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
|-++++++.=..+.... ..+.++.+..
T Consensus 75 iaaT~d~elN~~i~~~a-~~~~lvn~~d 101 (202)
T PRK06718 75 IAATNDPRVNEQVKEDL-PENALFNVIT 101 (202)
T ss_pred EEcCCCHHHHHHHHHHH-HhCCcEEECC
Confidence 99999865444444444 4455666653
No 419
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.96 E-value=0.46 Score=42.09 Aligned_cols=106 Identities=18% Similarity=0.229 Sum_probs=68.3
Q ss_pred HHHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHH
Q 020768 172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 172 ~~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
..+...+++++.+||=+|+|. |..+..+++..+. .+++++.+++..+.+++.... ..+.... .+.. +. ..
T Consensus 43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~----~~-~~ 113 (263)
T PTZ00098 43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL----KK-DF 113 (263)
T ss_pred HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc----cC-CC
Confidence 345667889999999998853 5556677777777 799999999888887764221 1111111 1111 00 00
Q ss_pred hCCCccEEEEcC-----C---CHHHHHHHHHHcccCCEEEEEcC
Q 020768 251 MGTGIDVSFDCA-----G---FNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 251 ~~~~~d~vid~~-----g---~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
....||+|+..- + ....++.+.+.|+|+|++++...
T Consensus 114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 134689998621 1 13467788899999999998764
No 420
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.35 Score=42.82 Aligned_cols=81 Identities=19% Similarity=0.181 Sum_probs=48.1
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHhCCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~~~ 254 (321)
..+++|+|+ |++|...++.+...|+ +|+++.++.++.+.+ +..+... .+..+-. ..+..+.+.++... .++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA-LGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence 458999998 9999999998888998 577776666554322 2233322 1122211 12222233332221 346
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 421
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.94 E-value=0.33 Score=42.08 Aligned_cols=99 Identities=14% Similarity=0.217 Sum_probs=58.8
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~ 238 (321)
..+|+|+|+|++|..++..+-..|...+..+|.+. .| .+.++++.++.-+.... .
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--~ 88 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--E 88 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee--e
Confidence 46899999999999999999999998888887542 11 12233444332221111 1
Q ss_pred cHH-HHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCC-EEEEEc
Q 020768 239 DIA-EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVG 285 (321)
Q Consensus 239 ~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g 285 (321)
.+. +...++ ....+|+|+||..+...-..+.+.+...+ .++..+
T Consensus 89 ~i~~~~~~~l---~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~ 134 (231)
T cd00755 89 FLTPDNSEDL---LGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM 134 (231)
T ss_pred ecCHhHHHHH---hcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 111 122222 23469999999998665555555555554 344433
No 422
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.93 E-value=0.31 Score=45.56 Aligned_cols=35 Identities=40% Similarity=0.494 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~ 215 (321)
.+.+|+|+|+|++|..++..+...|...+..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999889988876
No 423
>PLN02256 arogenate dehydrogenase
Probab=94.93 E-value=0.63 Score=42.16 Aligned_cols=95 Identities=18% Similarity=0.195 Sum_probs=57.9
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCC
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
+...-..+.+|.|+|.|.+|...+..++..|. .|++++.++. .+.++++|+.. .. +..+ +. ...
T Consensus 29 ~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~----~~~e----~~---~~~ 92 (304)
T PLN02256 29 EELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FR----DPDD----FC---EEH 92 (304)
T ss_pred HhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eC----CHHH----Hh---hCC
Confidence 33444456789999999999998888888887 6778877764 35566677532 11 1111 10 124
Q ss_pred ccEEEEcCCCHHHHHHHHHH-----cccCCEEEEEcC
Q 020768 255 IDVSFDCAGFNKTMSTALSA-----TRAGGKVCLVGM 286 (321)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~-----l~~~G~~v~~g~ 286 (321)
.|+||-|+... .....++- ++++..++.++.
T Consensus 93 aDvVilavp~~-~~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 93 PDVVLLCTSIL-STEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred CCEEEEecCHH-HHHHHHHhhhhhccCCCCEEEecCC
Confidence 67888877753 33333322 345566666665
No 424
>PLN03139 formate dehydrogenase; Provisional
Probab=94.92 E-value=0.22 Score=46.60 Aligned_cols=89 Identities=18% Similarity=0.227 Sum_probs=58.5
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.|.+|.|+|.|.+|...++.++.+|. .|++.+++..+.+..++.|+... .++. ++. ...|+|+.
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~----ell----~~sDvV~l 261 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLD----AML----PKCDVVVI 261 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHH----HHH----hhCCEEEE
Confidence 47799999999999999999999999 67888776544444455554321 1122 221 23677777
Q ss_pred cCCCHHH----H-HHHHHHcccCCEEEEEc
Q 020768 261 CAGFNKT----M-STALSATRAGGKVCLVG 285 (321)
Q Consensus 261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g 285 (321)
+...... + ...+..++++..++.++
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCCeEEEECC
Confidence 7664221 1 24567777777777776
No 425
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.90 E-value=0.24 Score=44.52 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=30.4
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD 216 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~ 216 (321)
.+.+++|+|+|+.+.+++..+...|++.+.++.++.
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567999999999998877777778998898988884
No 426
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.37 Score=43.58 Aligned_cols=81 Identities=19% Similarity=0.252 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh----------hHHH----HHHHcCCCe-EEecCC-CcccHHHH
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----------YRLS----VAKELGADN-IVKVST-NLQDIAEE 243 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~----------~~~~----~~~~~g~~~-vi~~~~-~~~~~~~~ 243 (321)
.|.+++|+|+ +++|..+++.+...|+ .|+.++++. ++.+ .++..|... .+..+- +..+..+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4689999998 9999999999999999 566666652 2222 223334321 222221 22233333
Q ss_pred HHHHHHHhCCCccEEEEcC-C
Q 020768 244 VEKIQKAMGTGIDVSFDCA-G 263 (321)
Q Consensus 244 ~~~~~~~~~~~~d~vid~~-g 263 (321)
+.++.+. .+.+|++|++. |
T Consensus 86 ~~~~~~~-~g~iDilVnnA~g 105 (305)
T PRK08303 86 VERIDRE-QGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHH-cCCccEEEECCcc
Confidence 3443332 35699999988 5
No 427
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.89 E-value=0.17 Score=45.12 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=59.5
Q ss_pred HHHHHcCC-CCCCEEEEEcCCh-hHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 172 HACRRANI-GPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 172 ~~l~~~~~-~~g~~vlI~Gag~-vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
..++...+ -.|.+++|+|.|. +|..++.++...|++ |.++.+.. .++. +.
T Consensus 147 ~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t---------------------~~l~----~~-- 198 (286)
T PRK14175 147 EILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS---------------------KDMA----SY-- 198 (286)
T ss_pred HHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc---------------------hhHH----HH--
Confidence 34455443 3689999999955 999999999999994 55554321 1111 11
Q ss_pred HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
-...|+||.++|.+..+.. +.++++..++.+|.+.
T Consensus 199 --~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 199 --LKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred --HhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 1357999999998766655 5689999999999754
No 428
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.87 E-value=0.53 Score=43.10 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=67.5
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHH-HcCCCeEEEEeCChhHHH-HHHHc----CCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKEL----GADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~-~~g~~~vv~v~~~~~~~~-~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
..+...+++|+|+|..+...+..+. ..+.+.+.+..++.+|.+ +++++ |.. +... .+..+.+
T Consensus 125 a~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av------- 192 (326)
T TIGR02992 125 AREDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM------- 192 (326)
T ss_pred CCCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh-------
Confidence 3345678999999999988877776 578778888888887755 44444 432 2211 1222211
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT 296 (321)
Q Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 296 (321)
...|+|+.|++....+ -..+.++++-.+..+|...+ ..+++..
T Consensus 193 -~~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~~~p~~rEld~~ 236 (326)
T TIGR02992 193 -SGADIIVTTTPSETPI-LHAEWLEPGQHVTAMGSDAEHKNEIDPA 236 (326)
T ss_pred -ccCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCCCCCCceecCHH
Confidence 3589999999874321 12356889888888885533 3455544
No 429
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.84 E-value=0.28 Score=45.07 Aligned_cols=88 Identities=22% Similarity=0.251 Sum_probs=59.0
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.|.+|.|+|.|.+|...++.++.+|. .|++.+++.+.. ...+++... .++. ++. ...|+|+-
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~l~----ell----~~aDiV~l 210 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RPLE----ELL----RESDFVSL 210 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cCHH----HHH----hhCCEEEE
Confidence 47799999999999999999999999 688887765432 233444321 1122 221 23688888
Q ss_pred cCCCHH-H---H-HHHHHHcccCCEEEEEcC
Q 020768 261 CAGFNK-T---M-STALSATRAGGKVCLVGM 286 (321)
Q Consensus 261 ~~g~~~-~---~-~~~~~~l~~~G~~v~~g~ 286 (321)
+..... + + ...+..++++..++.++-
T Consensus 211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 211 HVPLTKETYHMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred eCCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence 877532 1 1 356677888888888773
No 430
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.83 E-value=0.22 Score=40.98 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcCCh-hHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccE
Q 020768 179 IGPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257 (321)
Q Consensus 179 ~~~g~~vlI~Gag~-vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (321)
--.|.+++|+|+|. +|..++..++..|+ .+.++.++.+ +..+.+ ..+|+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------~l~~~l--------~~aDi 90 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------NLKEHT--------KQADI 90 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------hHHHHH--------hhCCE
Confidence 35789999999986 59989999999998 5666654421 111111 34799
Q ss_pred EEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
||.+++.+..+.. +.++++-.++.++.+.
T Consensus 91 VIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 91 VIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred EEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 9999998654333 3567777778888664
No 431
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.82 E-value=0.37 Score=43.78 Aligned_cols=81 Identities=25% Similarity=0.362 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcC-CCeEEEEeCChhHHHH-HHHcCC--Ce--EEecCCC-cccHHHHHHHHHHHhCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSV-AKELGA--DN--IVKVSTN-LQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~-~~~~g~--~~--vi~~~~~-~~~~~~~~~~~~~~~~~ 253 (321)
+.+++|+|+ +++|...+..+...| . .|+.+.++.++.+. .++++. .. .+..+-. ..+..+.+.++.+ ..+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE-SGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence 568999999 999999888888889 7 67777777666543 334431 11 2222211 1233333333322 235
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
++|++|.+.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999998873
No 432
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=94.80 E-value=0.88 Score=41.03 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=35.5
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC
Q 020768 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA 227 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~ 227 (321)
+|.|+|.|.+|...+.-+...|. .|++.++++++.+.+.+.|.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 58899999999988777777888 67888999998888777664
No 433
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.79 E-value=0.38 Score=40.64 Aligned_cols=93 Identities=22% Similarity=0.220 Sum_probs=58.7
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-------------------hH----HHHHHHcCCCeEEecCCCcc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YR----LSVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-------------------~~----~~~~~~~g~~~vi~~~~~~~ 238 (321)
..+|+|.|+|++|.-.+..+-..|...+..+|.+. .| .+.++++.++..+.....
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~-- 98 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD-- 98 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec--
Confidence 47899999999999999999999998888887441 01 223556666544432211
Q ss_pred cHHHHHHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCE
Q 020768 239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~ 280 (321)
...+...++ ..++|+|++|..+......+-+.+...+.
T Consensus 99 ~~~~~~~~~----~~~~dvVi~~~~~~~~~~~ln~~c~~~~i 136 (197)
T cd01492 99 DISEKPEEF----FSQFDVVVATELSRAELVKINELCRKLGV 136 (197)
T ss_pred CccccHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 111111121 25789999998876554455555555553
No 434
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=94.75 E-value=0.11 Score=46.98 Aligned_cols=102 Identities=25% Similarity=0.283 Sum_probs=60.3
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-----------------------hHHHHHHHcCCCeEEe-cCCCc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-----------------------YRLSVAKELGADNIVK-VSTNL 237 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-----------------------~~~~~~~~~g~~~vi~-~~~~~ 237 (321)
...|||+|+|++|--++|++.+.|..++=.+|.+. ....++++++.+.-++ |.+ .
T Consensus 66 ~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~-~ 144 (427)
T KOG2017|consen 66 NSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNE-F 144 (427)
T ss_pred CccEEEEccCCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechh-h
Confidence 35799999999999999999999987655454221 1122344555433222 211 1
Q ss_pred ccHHHHHHHHHHHhCCCccEEEEcCCCHHH---HH----------HHHHHcccCCEEEEEcCCCC
Q 020768 238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKT---MS----------TALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~---~~----------~~~~~l~~~G~~v~~g~~~~ 289 (321)
-..+. ..++ -+++|+|+||+-+..+ ++ -.-..|+-.|++..+...++
T Consensus 145 L~~sN-a~~I----i~~YdvVlDCTDN~~TRYLisD~CVlLgkpLVSgSaLr~EGQLtvYny~~G 204 (427)
T KOG2017|consen 145 LSSSN-AFDI----IKQYDVVLDCTDNVPTRYLISDVCVLLGKPLVSGSALRWEGQLTVYNYNNG 204 (427)
T ss_pred ccchh-HHHH----hhccceEEEcCCCccchhhhhhHHHHcCCcccccccccccceeEEeecCCC
Confidence 11111 1122 2579999999987532 11 11246777888877776554
No 435
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.75 E-value=0.42 Score=41.54 Aligned_cols=106 Identities=20% Similarity=0.249 Sum_probs=67.8
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
.++.++++||=+|. +.|+.++.+++.++ ...+++++.+++..+.++ +.|...-+.+.. .+..+.+.++....
T Consensus 64 ~~~~~~~~vLEiGt-~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~~~ 140 (234)
T PLN02781 64 VKIMNAKNTLEIGV-FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLNND 140 (234)
T ss_pred HHHhCCCEEEEecC-cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHhCC
Confidence 45567889998886 33666666677653 347999999998877765 356543222221 34444444443211
Q ss_pred -CCCccEEEEcCCC---HHHHHHHHHHcccCCEEEEEc
Q 020768 252 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 252 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 285 (321)
...||+||--... ...++.+++.|++||.++.-.
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 3579999865432 346788899999999988644
No 436
>PRK08291 ectoine utilization protein EutC; Validated
Probab=94.73 E-value=0.67 Score=42.49 Aligned_cols=104 Identities=13% Similarity=0.166 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCChhHHHHHHHHHH-cCCCeEEEEeCChhHHHHH-HHc----CCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 179 IGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVA-KEL----GADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 179 ~~~g~~vlI~Gag~vG~~a~qla~~-~g~~~vv~v~~~~~~~~~~-~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
.+...+++|+|+|+.+.+.+..+.. .+.+.+.+.+++.++.+.+ +++ |.. +..+ .++.+.+
T Consensus 129 ~~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al-------- 195 (330)
T PRK08291 129 REDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAV-------- 195 (330)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHH--------
Confidence 3455789999999999887776664 6777888888988876644 333 332 1111 1222221
Q ss_pred CCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC-Cccccch
Q 020768 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL-EMTVPLT 296 (321)
Q Consensus 253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 296 (321)
...|+|+.+++....+-. ...++++-.+..+|...+ ..+++..
T Consensus 196 ~~aDiVi~aT~s~~p~i~-~~~l~~g~~v~~vg~d~~~~rEld~~ 239 (330)
T PRK08291 196 AGADIIVTTTPSEEPILK-AEWLHPGLHVTAMGSDAEHKNEIAPA 239 (330)
T ss_pred ccCCEEEEeeCCCCcEec-HHHcCCCceEEeeCCCCCCcccCCHH
Confidence 347999999887532211 234788888888885433 3455543
No 437
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.72 E-value=0.63 Score=44.28 Aligned_cols=105 Identities=15% Similarity=0.154 Sum_probs=63.3
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH----HcCCCeEE-ecCCCcccHHHHHHHHH
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIV-KVSTNLQDIAEEVEKIQ 248 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vi-~~~~~~~~~~~~~~~~~ 248 (321)
......++|++||=.|+|+ |..++++++.++...+++++.++++.+.++ ++|....+ ....+..+.. .+.
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~----~~~ 305 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPS----QWA 305 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccccc----ccc
Confidence 3456778999988887643 334445555554337999999999877654 46665211 1111111110 000
Q ss_pred HHhCCCccEEEE---cCCC-------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768 249 KAMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 249 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g 285 (321)
....||.||- |+|. ...+..+++.|++||+++..-
T Consensus 306 --~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst 368 (426)
T TIGR00563 306 --ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT 368 (426)
T ss_pred --cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1346999874 4542 136778899999999998654
No 438
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.72 E-value=0.37 Score=43.09 Aligned_cols=83 Identities=28% Similarity=0.328 Sum_probs=49.0
Q ss_pred CCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCCh---------hHH-HHHHH---cCCCe-EEecCC-CcccHHHH
Q 020768 180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---------YRL-SVAKE---LGADN-IVKVST-NLQDIAEE 243 (321)
Q Consensus 180 ~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~---------~~~-~~~~~---~g~~~-vi~~~~-~~~~~~~~ 243 (321)
-.+.++||+|+ +++|...++.+...|+ .+++++.+. ++. +.+++ .+... .+..+- +.++..+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 35789999998 9999999998888999 466665443 322 22222 23322 121111 12233333
Q ss_pred HHHHHHHhCCCccEEEEcCCC
Q 020768 244 VEKIQKAMGTGIDVSFDCAGF 264 (321)
Q Consensus 244 ~~~~~~~~~~~~d~vid~~g~ 264 (321)
+.++.+. .+.+|++|.+.|.
T Consensus 83 ~~~~~~~-~g~id~lv~nAG~ 102 (286)
T PRK07791 83 VDAAVET-FGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHh-cCCCCEEEECCCC
Confidence 4443332 3579999999874
No 439
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.71 E-value=0.38 Score=42.15 Aligned_cols=82 Identities=22% Similarity=0.206 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.+.++||+|+ |++|...++.+...|++ ++.+.+ +.++.+. ++..+... .+..+- +..+..+.+..+.+. .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE-F 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence 4789999998 99999999999999984 555444 3333222 22233221 121111 112222223333222 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+++|+++.+.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 579999999884
No 440
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.71 E-value=0.21 Score=44.89 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD 216 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~ 216 (321)
.+.+++|+|+|++|.+++..+...|++.|.++.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999999888889997788888875
No 441
>PRK03612 spermidine synthase; Provisional
Probab=94.71 E-value=0.4 Score=46.85 Aligned_cols=99 Identities=18% Similarity=0.140 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC-C---------CeEEecCCCcccHHHHHHHHHH
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-A---------DNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g-~---------~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
++.++||++|+| .|..+..+++.-...++.+++-+++-.+.+++.. . +.-+... ..|..+.+++
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi--~~Da~~~l~~--- 369 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVV--NDDAFNWLRK--- 369 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEE--EChHHHHHHh---
Confidence 456899999875 3556666776544468999999999999988721 1 0001100 1233333322
Q ss_pred HhCCCccEEEEcCCCH-----------HHHHHHHHHcccCCEEEEEc
Q 020768 250 AMGTGIDVSFDCAGFN-----------KTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 250 ~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g 285 (321)
....+|+|+-....+ +.++.+.+.|+++|.++.-.
T Consensus 370 -~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 370 -LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred -CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 246799998754422 35678899999999988754
No 442
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.69 E-value=0.021 Score=45.80 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=56.4
Q ss_pred EEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCC----CcccHHHHHHHHHHHhCCCccEEEE
Q 020768 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST----NLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 185 vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~----~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
|+|+|+|++|.+.+..++..|. .|..+.+++ +.+..++.|........+ ........ ......+|++|-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv 73 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV 73 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence 6899999999988888888888 577777777 777677666432111100 00000000 011367999999
Q ss_pred cCCCHH---HHHHHHHHcccCCEEEEEc
Q 020768 261 CAGFNK---TMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 261 ~~g~~~---~~~~~~~~l~~~G~~v~~g 285 (321)
|+=..+ .++.+...+.++..++++.
T Consensus 74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~q 101 (151)
T PF02558_consen 74 AVKAYQLEQALQSLKPYLDPNTTIVSLQ 101 (151)
T ss_dssp -SSGGGHHHHHHHHCTGEETTEEEEEES
T ss_pred EecccchHHHHHHHhhccCCCcEEEEEe
Confidence 987643 3444445566666666654
No 443
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.67 E-value=0.45 Score=42.04 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=66.5
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHHcC-------CCeEEecCCCcccHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELG-------ADNIVKVSTNLQDIAEEVEK 246 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~~g-------~~~vi~~~~~~~~~~~~~~~ 246 (321)
+...++++++||=+|+|. |..+..+++..+. ..|+++|.+++-.+.+++.. .+.+-....+. .+
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~-------~~ 138 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA-------TD 138 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc-------cc
Confidence 446778899999998854 4566777777653 37999999999888776421 11111111110 11
Q ss_pred HHHHhCCCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEcCCC
Q 020768 247 IQKAMGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 247 ~~~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
+. .....+|.|+-..+ + ...++.+.+.|+|||++++.-...
T Consensus 139 lp-~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~ 185 (261)
T PLN02233 139 LP-FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK 185 (261)
T ss_pred CC-CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence 10 11345899875322 1 246889999999999998886543
No 444
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.67 E-value=0.37 Score=44.38 Aligned_cols=78 Identities=18% Similarity=0.121 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH-HHHHcCC--C-eEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA--D-NIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~-~~~~~g~--~-~vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
.|.+|||+|+ |.+|..+++.+...|. .|++++++.+... ..+.++. . ..+..+ -.+. +.+.++.+ ..++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--l~~~-~~~~~~~~--~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGD--IRDA-AKLRKAIA--EFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEcc--CCCH-HHHHHHHh--hcCC
Confidence 3689999998 9999999999999998 5777766554322 2222221 1 112111 1121 22333322 2368
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|+||.+.+.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999999873
No 445
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.65 E-value=0.32 Score=41.84 Aligned_cols=82 Identities=21% Similarity=0.212 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
+..++||+|+ |.+|...++.+...|.+.++.+.++.+..+.+ ...+.. ..+..+- +..++.+.+.++.+. ..
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~ 83 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER-FG 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH-cC
Confidence 3468999999 99999999999999995444444444433322 222322 1222221 122233333333221 35
Q ss_pred CccEEEEcCC
Q 020768 254 GIDVSFDCAG 263 (321)
Q Consensus 254 ~~d~vid~~g 263 (321)
++|.+|.+.|
T Consensus 84 ~id~vi~~ag 93 (249)
T PRK12825 84 RIDILVNNAG 93 (249)
T ss_pred CCCEEEECCc
Confidence 7999999887
No 446
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.65 E-value=0.28 Score=41.73 Aligned_cols=107 Identities=21% Similarity=0.272 Sum_probs=71.0
Q ss_pred CCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh-
Q 020768 178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM- 251 (321)
Q Consensus 178 ~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~- 251 (321)
+.....+||-+|. ..|+.++.+|+.+. -.++++++.++++.+.++ +.|...-+.+.. .+..+.+.++....
T Consensus 42 ~~~~~k~vLEIGt-~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~~ 118 (205)
T PF01596_consen 42 RLTRPKRVLEIGT-FTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDGE 118 (205)
T ss_dssp HHHT-SEEEEEST-TTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTTT
T ss_pred HhcCCceEEEecc-ccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhccC
Confidence 3455679999985 45888888888763 137999999998887774 456543233222 34555566554322
Q ss_pred CCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEcCC
Q 020768 252 GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 252 ~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
.+.||+||--..-. ..+..+++.|++||.++.=...
T Consensus 119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~l 157 (205)
T PF01596_consen 119 EGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNVL 157 (205)
T ss_dssp TTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETTT
T ss_pred CCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcccc
Confidence 24799988654433 3577888999999999887744
No 447
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.64 E-value=0.4 Score=41.31 Aligned_cols=103 Identities=19% Similarity=0.224 Sum_probs=64.5
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
....++++++||=+|+|. |..+..+++..+. ..+++++.+++..+.+++ .+.+.+..... +.. ++.
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~----~~~- 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NAM----ELP- 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---chh----cCC-
Confidence 456778899999998854 5566677776542 279999999888776653 23332211111 111 110
Q ss_pred HhCCCccEEEEcC-----CC-HHHHHHHHHHcccCCEEEEEcC
Q 020768 250 AMGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 250 ~~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
.....+|+|+-+. .. ...+..+.+.|+++|+++..-.
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 1135689987532 11 2456788899999999987753
No 448
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.62 E-value=0.95 Score=39.35 Aligned_cols=108 Identities=21% Similarity=0.321 Sum_probs=74.4
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
....+++|++||=+++ +.|-.++.+++..|-..|+++|-+++-++.+++-- ... +.+... | ..++. .
T Consensus 45 ~~~~~~~g~~vLDva~-GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~--d----Ae~LP-f 115 (238)
T COG2226 45 SLLGIKPGDKVLDVAC-GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG--D----AENLP-F 115 (238)
T ss_pred HhhCCCCCCEEEEecC-CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe--c----hhhCC-C
Confidence 3456668999987765 45999999999998668999999999888776532 222 111111 1 11111 1
Q ss_pred hCCCccEEEEcCCC------HHHHHHHHHHcccCCEEEEEcCCCCCc
Q 020768 251 MGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGHLEM 291 (321)
Q Consensus 251 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~~ 291 (321)
-+..||+|.-+.|= +..+.++.+.|+|+|+++++.+..+..
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~ 162 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN 162 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence 24668888776653 246889999999999999999876643
No 449
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.59 E-value=0.3 Score=44.41 Aligned_cols=87 Identities=11% Similarity=0.163 Sum_probs=56.5
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
.|.+|.|+|.|.+|...++.++.+|+ .|.+.+.+.++.. +.+... ...+ +.++. ...|+|+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~----l~e~l----~~aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREE----LSAFL----SQTRVLIN 196 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----cccc----HHHHH----hcCCEEEE
Confidence 57899999999999999999999999 6778776543321 111111 0111 22221 34688888
Q ss_pred cCCCHHH----H-HHHHHHcccCCEEEEEc
Q 020768 261 CAGFNKT----M-STALSATRAGGKVCLVG 285 (321)
Q Consensus 261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g 285 (321)
+...... + ...++.++++..++.+|
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDGAYLLNLA 226 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence 7775322 1 24567788888877777
No 450
>PRK05855 short chain dehydrogenase; Validated
Probab=94.59 E-value=0.34 Score=47.58 Aligned_cols=82 Identities=23% Similarity=0.273 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHhCC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
.+.++||+|+ |++|...++.+...|. .|+.++++.++.+.+ ++.|.. ..+..+- +.....+.+.++.+ ..+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA-EHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-hcC
Confidence 4568999998 9999999988888999 588888887665433 223432 1222221 12223333333322 235
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 79999999885
No 451
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.58 E-value=0.34 Score=43.22 Aligned_cols=88 Identities=20% Similarity=0.141 Sum_probs=57.0
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 263 (321)
+|.|+|.|.+|...+..++..|. .|.+.++++++.+.+.+.|.-.... .+. + . -...|+||.|+.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~-----~~~-~---~-----~~~aDlVilavp 66 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS-----TDL-S---L-----LKDCDLVILALP 66 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc-----CCH-h---H-----hcCCCEEEEcCC
Confidence 58899999999888888887887 6899999998888888777421110 011 1 1 135788888888
Q ss_pred CHHH---HHHHHHHcccCCEEEEEcC
Q 020768 264 FNKT---MSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 264 ~~~~---~~~~~~~l~~~G~~v~~g~ 286 (321)
.+.. ++.+...++++..+..++.
T Consensus 67 ~~~~~~~~~~l~~~l~~~~ii~d~~S 92 (279)
T PRK07417 67 IGLLLPPSEQLIPALPPEAIVTDVGS 92 (279)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEeCcc
Confidence 5433 2233344455555555553
No 452
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.55 E-value=0.35 Score=41.98 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=48.3
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH-HH---HcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~-~~---~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
.+++|+|+ |++|...++.+...|+ .++.+.+++++.+. .+ ..+... .+..+- +.....+.+.++.+. .+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCC
Confidence 36899998 9999999999989998 57777776654332 22 233221 122111 122233333443332 3468
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999999874
No 453
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.54 E-value=0.18 Score=50.82 Aligned_cols=78 Identities=23% Similarity=0.330 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChh---------------------HHHHHHHcCCCeEEecCCCcc
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY---------------------RLSVAKELGADNIVKVSTNLQ 238 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~vi~~~~~~~ 238 (321)
..+++|+|+|+|+.|+.++..+...|++ |++++..++ ..+.++++|++...+..-. .
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~-V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~ 402 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVA-VTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVG-K 402 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeC-C
Confidence 3578999999999999999999999994 777765432 3456677786543221100 1
Q ss_pred cHHHHHHHHHHHhCCCccEEEEcCCCH
Q 020768 239 DIAEEVEKIQKAMGTGIDVSFDCAGFN 265 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~d~vid~~g~~ 265 (321)
+. .+..+ ...+|.||.++|..
T Consensus 403 ~i--~~~~~----~~~~DavilAtGa~ 423 (654)
T PRK12769 403 DI--SLESL----LEDYDAVFVGVGTY 423 (654)
T ss_pred cC--CHHHH----HhcCCEEEEeCCCC
Confidence 11 11122 13689999998863
No 454
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.53 E-value=0.37 Score=44.77 Aligned_cols=97 Identities=24% Similarity=0.267 Sum_probs=64.3
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHc--CCCeEEEEe--CChhH-HHHHHHcCCCeEEecCCCcccHHHHHHHHH--------
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAF--GAPRIVIVD--VDDYR-LSVAKELGADNIVKVSTNLQDIAEEVEKIQ-------- 248 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~--g~~~vv~v~--~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~-------- 248 (321)
++|.|+|+ |.+|..+++..+.. .+ .++++. ++.++ .++++++++..+...++. ..+.+++..
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~---~~~~l~~~l~~~~~~v~ 77 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEE---AAKELKEALAAAGIEVL 77 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHH---HHHHHHHhhccCCceEE
Confidence 57899998 99999999998865 55 455543 44444 346678999877654321 111121110
Q ss_pred -------H-HhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEE
Q 020768 249 -------K-AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL 283 (321)
Q Consensus 249 -------~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 283 (321)
+ .....+|+|+.+.++...+...+.+++.|-++.+
T Consensus 78 ~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 78 AGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred EChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 0 0124589999999987788888899988777655
No 455
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.52 E-value=0.22 Score=44.63 Aligned_cols=84 Identities=12% Similarity=0.137 Sum_probs=57.7
Q ss_pred HHHHcC-CCCCCEEEEEcCCh-hHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 173 ACRRAN-IGPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 173 ~l~~~~-~~~g~~vlI~Gag~-vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
.++... --.|.+++|+|+|+ +|...+.++...|+ .|.++.+..+ + +.+.
T Consensus 149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~----L~~~--- 199 (283)
T PRK14192 149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------N----LPEL--- 199 (283)
T ss_pred HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------h----HHHH---
Confidence 344433 35788999999976 99999999999998 5666543111 1 1111
Q ss_pred hCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCCC
Q 020768 251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
-..+|++|.++|.+..+. .+.++++..++.+|...
T Consensus 200 -~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 200 -VKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred -hccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 135899999998766433 36689998998888553
No 456
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=94.52 E-value=0.37 Score=41.26 Aligned_cols=116 Identities=22% Similarity=0.275 Sum_probs=69.0
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcC---C-CeEEecC---CCcccHHHHHHHHHHHhCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---A-DNIVKVS---TNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g---~-~~vi~~~---~~~~~~~~~~~~~~~~~~~ 253 (321)
|.+++++|+ |++|+.....+-..|+. +.++..+.|+.+...+|. . ..++.+. ....+..+..++...+ -+
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik-~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~-fg 82 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIK-VLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT-FG 82 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCch-heeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH-hC
Confidence 889999976 99999988888888995 555555544444333332 2 2232211 1234445555555443 35
Q ss_pred CccEEEEcCCCHH-----------------HHHHHHHH-----cccCCEEEEEcCCCCCccccchhhh
Q 020768 254 GIDVSFDCAGFNK-----------------TMSTALSA-----TRAGGKVCLVGMGHLEMTVPLTPAA 299 (321)
Q Consensus 254 ~~d~vid~~g~~~-----------------~~~~~~~~-----l~~~G~~v~~g~~~~~~~~~~~~~~ 299 (321)
.+|+.|+..|-.+ .-..++.. -.++|.++.+++..+..+.+.-+.+
T Consensus 83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY 150 (261)
T KOG4169|consen 83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY 150 (261)
T ss_pred ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence 6899999877421 11222222 2477999999987765555555543
No 457
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.51 E-value=0.41 Score=41.43 Aligned_cols=81 Identities=26% Similarity=0.220 Sum_probs=46.1
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
+++||+|+ |++|...++.+...|++.++...++.++.+. ++..+... .+..+- +..+..+.+.++.+. .+++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCCC
Confidence 47999998 9999999999888898533334445444332 22233221 222221 122333333333322 3569
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06947 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCcc
Confidence 999998873
No 458
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=94.50 E-value=0.046 Score=28.84 Aligned_cols=22 Identities=14% Similarity=0.228 Sum_probs=16.1
Q ss_pred ceeEEEccCCCeEEEEecCCCC
Q 020768 18 NMAAWLLGVNTLKIQPFELPSL 39 (321)
Q Consensus 18 ~~a~~~~~~~~l~~~e~~~p~~ 39 (321)
|||+++.+++.++++++|.|.+
T Consensus 1 MkAv~y~G~~~v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKDVRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTEEEEEEE----S
T ss_pred CcceEEeCCCceEEEECCCccc
Confidence 8999999999999999999875
No 459
>PRK00536 speE spermidine synthase; Provisional
Probab=94.49 E-value=0.23 Score=43.83 Aligned_cols=101 Identities=10% Similarity=-0.115 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 180 ~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
...++|||+|+|- |-.+-.++|+-. .|..++-+++-.+.++++-+...-.+++..-+....+. +.....+|+||
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~---~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhh---hccCCcCCEEE
Confidence 4458999998643 555667777753 79999999999998888332110011111111111121 11235799876
Q ss_pred E-cCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768 260 D-CAGFNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 260 d-~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
- +.-+++..+.+.++|+++|.++.=+.
T Consensus 145 vDs~~~~~fy~~~~~~L~~~Gi~v~Qs~ 172 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKEDGVFISVAK 172 (262)
T ss_pred EcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence 4 46667788899999999999887653
No 460
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.49 E-value=0.26 Score=43.23 Aligned_cols=78 Identities=22% Similarity=0.232 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHhCCCccEE
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS 258 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~~~~~~~d~v 258 (321)
.+.++||+|+ |++|...++.+...|+ .|+.++.+.++.+. .....+ .|.. +..+..+.+..+.+. .+++|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~-~~~~~~~~~~~~~~~-~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVS-SAEEVNHTVAEIIEK-FGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCC-CHHHHHHHHHHHHHH-cCCCCEE
Confidence 3678999998 9999999999988999 57777766554321 111111 1221 122333333333322 3579999
Q ss_pred EEcCCC
Q 020768 259 FDCAGF 264 (321)
Q Consensus 259 id~~g~ 264 (321)
|.+.|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 999873
No 461
>PRK09135 pteridine reductase; Provisional
Probab=94.45 E-value=0.51 Score=40.71 Aligned_cols=81 Identities=19% Similarity=0.150 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-hhHHHHH----HHcCCCe--EEecCC-CcccHHHHHHHHHHHh
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVA----KELGADN--IVKVST-NLQDIAEEVEKIQKAM 251 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-~~~~~~~----~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~ 251 (321)
.+.++||+|+ |.+|..++..+...|+ .|++++++ .++.+.+ ++..... .+..+- +.....+.+.++...
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA- 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 4578999998 9999999888888899 57776664 3332222 1222111 121111 112222233333222
Q ss_pred CCCccEEEEcCC
Q 020768 252 GTGIDVSFDCAG 263 (321)
Q Consensus 252 ~~~~d~vid~~g 263 (321)
.+++|++|.+.|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 356899999998
No 462
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.45 E-value=1 Score=38.63 Aligned_cols=105 Identities=19% Similarity=0.303 Sum_probs=66.5
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHHHcCC----CeEEecCCCcccHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGA----DNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
+....+++.+||-+|+|. |..+..+++..+ ...+++++.+++..+.+++.-. ...+.+.. .+..+ ..
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~----~~- 116 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEA----LP- 116 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--ccccc----CC-
Confidence 445566788999999877 778888888775 2379999999988887766321 11111110 01110 00
Q ss_pred HhCCCccEEEEcCC------CHHHHHHHHHHcccCCEEEEEcCC
Q 020768 250 AMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 250 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
.....+|+|+.... -...+..+.+.|+++|.++++...
T Consensus 117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~~ 160 (239)
T PRK00216 117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEFS 160 (239)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEec
Confidence 11346898874221 235678889999999999887643
No 463
>PLN02928 oxidoreductase family protein
Probab=94.45 E-value=0.35 Score=44.64 Aligned_cols=95 Identities=21% Similarity=0.312 Sum_probs=58.1
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-----CeEEecCCCcccHHHHHHHHHHHhCCCc
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-----DNIVKVSTNLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-----~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
.|.++.|+|.|.+|..+++.++.+|+ .|++.+++..+... ..++. ...........+ +.++. ...
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----L~ell----~~a 227 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHED----IYEFA----GEA 227 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccC----HHHHH----hhC
Confidence 47899999999999999999999999 68888776332211 11110 000000001112 22222 246
Q ss_pred cEEEEcCCCHH-H---H-HHHHHHcccCCEEEEEc
Q 020768 256 DVSFDCAGFNK-T---M-STALSATRAGGKVCLVG 285 (321)
Q Consensus 256 d~vid~~g~~~-~---~-~~~~~~l~~~G~~v~~g 285 (321)
|+|+.+..... + + ...+..++++..++.+|
T Consensus 228 DiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 228 DIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIA 262 (347)
T ss_pred CEEEECCCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence 89988776422 1 1 35678888888888887
No 464
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.41 E-value=0.11 Score=40.55 Aligned_cols=85 Identities=19% Similarity=0.216 Sum_probs=50.4
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCCCeEEEEe-CChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
-+|-|+|+|.+|......++..|. .|..+. ++.+..+.+.. ++...+.+..+ + -...|++|-
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~----~~~aDlv~i 74 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------I----LRDADLVFI 74 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------G----GCC-SEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------c----cccCCEEEE
Confidence 478999999999999999999998 566664 44445555543 44433322211 1 246899999
Q ss_pred cCCCHHHHHHHHHHcccC-----CEEEEE
Q 020768 261 CAGFNKTMSTALSATRAG-----GKVCLV 284 (321)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~-----G~~v~~ 284 (321)
++.++ .+....+.|... |++++-
T Consensus 75 avpDd-aI~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 75 AVPDD-AIAEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp -S-CC-HHHHHHHHHHCC--S-TT-EEEE
T ss_pred EechH-HHHHHHHHHHHhccCCCCcEEEE
Confidence 99974 667777666554 665544
No 465
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.41 E-value=0.66 Score=41.86 Aligned_cols=93 Identities=19% Similarity=0.174 Sum_probs=59.0
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 263 (321)
+|.++|.|.+|...+.-+...|. .+++.++++++.+.+++.|+... .+..+..++ -...|+||-|+.
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~~~-------~s~~~~~~~-----~~~advVi~~vp 68 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGITAR-------HSLEELVSK-----LEAPRTIWVMVP 68 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-------CCHHHHHHh-----CCCCCEEEEEec
Confidence 57888999999988887777888 57788999888888777775321 111111111 123578888888
Q ss_pred CHHHHHHH----HHHcccCCEEEEEcCCCC
Q 020768 264 FNKTMSTA----LSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 264 ~~~~~~~~----~~~l~~~G~~v~~g~~~~ 289 (321)
.+...... ...++++..++.++...+
T Consensus 69 ~~~~~~~v~~~i~~~l~~g~ivid~st~~~ 98 (299)
T PRK12490 69 AGEVTESVIKDLYPLLSPGDIVVDGGNSRY 98 (299)
T ss_pred CchHHHHHHHHHhccCCCCCEEEECCCCCc
Confidence 76343333 334555666666654444
No 466
>PRK08655 prephenate dehydrogenase; Provisional
Probab=94.39 E-value=0.46 Score=45.34 Aligned_cols=87 Identities=21% Similarity=0.263 Sum_probs=53.1
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHH-HHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 261 (321)
+|+|+|+ |.+|.+.+..++..|. .|++.++++++. +.+.++|+... . +..+. -...|+||-|
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv~~~----~---~~~e~--------~~~aDvVIla 65 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGVEYA----N---DNIDA--------AKDADIVIIS 65 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCCeec----c---CHHHH--------hccCCEEEEe
Confidence 6889985 9999999999999998 678888887764 56667775311 1 11111 1235777777
Q ss_pred CCCHHH---HHHHHHHcccCCEEEEEcC
Q 020768 262 AGFNKT---MSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 262 ~g~~~~---~~~~~~~l~~~G~~v~~g~ 286 (321)
+..+.. +..+...++++..++.++.
T Consensus 66 vp~~~~~~vl~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 66 VPINVTEDVIKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred cCHHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 664322 2223333455555666654
No 467
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.36 E-value=0.38 Score=45.25 Aligned_cols=34 Identities=38% Similarity=0.561 Sum_probs=29.6
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~ 215 (321)
..+|+|+|+|++|..++..+...|...+..+|.+
T Consensus 42 ~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 42 NARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 4689999999999999999999999888888643
No 468
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.33 E-value=0.22 Score=38.37 Aligned_cols=92 Identities=18% Similarity=0.183 Sum_probs=54.9
Q ss_pred EEEEEcC-ChhHHHHHHHHHHc-CCCeEEEEeCCh-hHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 184 NVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDD-YRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~-g~~~vv~v~~~~-~~~~~~~~~g----~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
+|.|+|+ |.+|...++++..+ .++.+.++.++. ....+...++ ...... .+ .+. ..+ ..+|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~--~~~----~~~-----~~~D 68 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSV-ED--ADP----EEL-----SDVD 68 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBE-EE--TSG----HHH-----TTES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeE-ee--cch----hHh-----hcCC
Confidence 6899998 99999999988874 443344444544 2222222222 222211 11 111 111 5799
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
+||.|.+.....+..-..++.+-+++..+..
T Consensus 69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 69 VVFLALPHGASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp EEEE-SCHHHHHHHHHHHHHTTSEEEESSST
T ss_pred EEEecCchhHHHHHHHHHhhCCcEEEeCCHH
Confidence 9999999765656666667888888888744
No 469
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.33 E-value=0.33 Score=41.74 Aligned_cols=80 Identities=24% Similarity=0.272 Sum_probs=46.1
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeC-ChhHHH-HHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHhCCC
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLS-VAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 254 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~-~~~~~~-~~~~~---g~~-~vi~~~~-~~~~~~~~~~~~~~~~~~~ 254 (321)
+++||+|+ |++|...+..+...|+ .++++.+ +.++.+ ...++ +.. ..+..+- +..+..+.+.++.+. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE-LGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-cCC
Confidence 36899998 9999999999999999 4665554 443332 22222 211 1222111 122333333443332 356
Q ss_pred ccEEEEcCCC
Q 020768 255 IDVSFDCAGF 264 (321)
Q Consensus 255 ~d~vid~~g~ 264 (321)
+|.+|.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 470
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.32 E-value=0.63 Score=45.93 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=64.9
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcC
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~ 262 (321)
++++|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...+.- +..+ .+.+++ .+-..+|.++-++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~---a~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQL---AHLDCARWLLLTI 489 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHh---cCccccCEEEEEc
Confidence 689999999999999999999998 5899999999999999888655432 1111 223332 2235689888877
Q ss_pred CCHHHH---HHHHHHcccCCEEEEEc
Q 020768 263 GFNKTM---STALSATRAGGKVCLVG 285 (321)
Q Consensus 263 g~~~~~---~~~~~~l~~~G~~v~~g 285 (321)
++++.- -.+.+...++-+++.-.
T Consensus 490 ~~~~~~~~iv~~~~~~~~~~~iiar~ 515 (558)
T PRK10669 490 PNGYEAGEIVASAREKRPDIEIIARA 515 (558)
T ss_pred CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 764322 12334445555665543
No 471
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.31 E-value=0.54 Score=43.82 Aligned_cols=34 Identities=32% Similarity=0.558 Sum_probs=30.4
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~ 215 (321)
..+|+|+|+|++|..++..+...|...+..+|.+
T Consensus 41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 5689999999999999999999999888888755
No 472
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.30 E-value=0.23 Score=43.51 Aligned_cols=108 Identities=27% Similarity=0.393 Sum_probs=65.6
Q ss_pred HHHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 020768 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI 247 (321)
Q Consensus 173 ~l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~ 247 (321)
.+..++++||++|+=-|.|. |.++..++++.|- ..|+..+.++++.+.++ .+|....+..... |..+.. +
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~--Dv~~~g--~ 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR--DVCEEG--F 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG----
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec--ceeccc--c
Confidence 34678999999999876533 6666677776542 27999999998887764 4666532222111 111000 0
Q ss_pred HHHhCCCccEEEEcCCCH-HHHHHHHHHc-ccCCEEEEEc
Q 020768 248 QKAMGTGIDVSFDCAGFN-KTMSTALSAT-RAGGKVCLVG 285 (321)
Q Consensus 248 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l-~~~G~~v~~g 285 (321)
.+.....+|.||--...+ ..+..+.+.| +++|+++++.
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 000135688887766665 4788999999 8999999986
No 473
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=94.30 E-value=0.35 Score=41.85 Aligned_cols=96 Identities=20% Similarity=0.331 Sum_probs=65.3
Q ss_pred ChhHHHHHHHHHHcCCCeEEEEeCChhH-----HHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHhCCCccEEEEcCCC
Q 020768 191 GPIGLVTMLGARAFGAPRIVIVDVDDYR-----LSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGF 264 (321)
Q Consensus 191 g~vG~~a~qla~~~g~~~vv~v~~~~~~-----~~~~~~~g~~~vi~~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~ 264 (321)
+++|...++.+...|+ .|++++++.++ .++.++.+.. ++..+-.+ ++..+.+.+..+..++.+|+++.+.+.
T Consensus 6 ~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~ 83 (241)
T PF13561_consen 6 SGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI 83 (241)
T ss_dssp SHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred CChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence 6899999999999999 68888888876 2344556644 55544332 333444455444444789999987654
Q ss_pred HH-----------------------------HHHHHHHHcccCCEEEEEcCCC
Q 020768 265 NK-----------------------------TMSTALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 265 ~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 288 (321)
.. ..+.+.+.++++|.++.++...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~ 136 (241)
T PF13561_consen 84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA 136 (241)
T ss_dssp CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG
T ss_pred cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh
Confidence 21 2556667888999999997543
No 474
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.30 E-value=0.89 Score=35.21 Aligned_cols=93 Identities=20% Similarity=0.230 Sum_probs=54.7
Q ss_pred EEEEEcC-ChhHHHHHHHHHH-cCCCeEEEEeCChh-H--HHHHHHcCCC--eEEecCCCcccHHHHHHHHHHHhCCCcc
Q 020768 184 NVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDY-R--LSVAKELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~-~g~~~vv~v~~~~~-~--~~~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
+|.|+|+ |-+|...++.+.. .+.+.+.+++++++ . .+...-.|.. .+... .+ +.++. ..+|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~~----~~~D 69 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEELL----EEAD 69 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHHT----TH-S
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHhc----ccCC
Confidence 6899999 9999999999998 67754555666551 1 1111111211 11111 11 22321 2389
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEEEEcCCCC
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHL 289 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 289 (321)
++||++. ++.....++.+...|.-+.+|.++-
T Consensus 70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG~ 101 (124)
T PF01113_consen 70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTGF 101 (124)
T ss_dssp EEEEES--HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCCC
Confidence 9999984 6777777777777788888887654
No 475
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=94.26 E-value=1.1 Score=40.23 Aligned_cols=113 Identities=18% Similarity=0.138 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHH-Hc--CCCe--EEecCCCcccHHHHHHHHHHH-h
Q 020768 179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL--GADN--IVKVSTNLQDIAEEVEKIQKA-M 251 (321)
Q Consensus 179 ~~~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~-~~--g~~~--vi~~~~~~~~~~~~~~~~~~~-~ 251 (321)
-..+.-|+|+|+ +++|...+.-+...|++ |++..-.++..+.++ +. +--. ..|. ++++...+..+-..+. .
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~-V~Agcl~~~gae~L~~~~~s~rl~t~~LDV-T~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFR-VFAGCLTEEGAESLRGETKSPRLRTLQLDV-TKPESVKEAAQWVKKHLG 103 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCE-EEEEeecCchHHHHhhhhcCCcceeEeecc-CCHHHHHHHHHHHHHhcc
Confidence 345567999999 99999999999999995 555445554444333 22 2111 2222 2333333333333322 2
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHcc-cCCEEEEEcCCCCCccc
Q 020768 252 GTGIDVSFDCAGFN--------------------------KTMSTALSATR-AGGKVCLVGMGHLEMTV 293 (321)
Q Consensus 252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~-~~G~~v~~g~~~~~~~~ 293 (321)
..+.=.+++++|-. +.....+.+++ ..||++.+++..+..+.
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~ 172 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL 172 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence 45577888888721 22344555664 45999999977665554
No 476
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.24 E-value=0.88 Score=41.10 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=36.1
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCC
Q 020768 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD 228 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~ 228 (321)
+|.|+|.|.+|...+.-+...|. .+++.++++++.+.+.+.|+.
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~ 45 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT 45 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence 58889999999988877777888 588889999888877777653
No 477
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.19 E-value=1.4 Score=37.84 Aligned_cols=93 Identities=14% Similarity=0.053 Sum_probs=56.6
Q ss_pred CCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEE
Q 020768 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259 (321)
Q Consensus 181 ~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vi 259 (321)
.+.+|||+|+|.++.-=+..+...|+. |.+++..- +....+.+.|.-..+. . ++.+. . -.++++||
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~~~~i~~~~---r--~~~~~--d-----l~g~~LVi 90 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKKYGNLKLIK---G--NYDKE--F-----IKDKHLIV 90 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHhCCCEEEEe---C--CCChH--H-----hCCCcEEE
Confidence 467999999999999888888889984 55554332 2222222223211221 1 11111 1 14689999
Q ss_pred EcCCCHHHHHHHHHHcccCCEEEEEcC
Q 020768 260 DCAGFNKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
-|+..++.=+.+....+..+.++.+..
T Consensus 91 aATdD~~vN~~I~~~a~~~~~lvn~vd 117 (223)
T PRK05562 91 IATDDEKLNNKIRKHCDRLYKLYIDCS 117 (223)
T ss_pred ECCCCHHHHHHHHHHHHHcCCeEEEcC
Confidence 999986555566666666677777653
No 478
>PRK05599 hypothetical protein; Provisional
Probab=94.18 E-value=0.65 Score=40.40 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=47.1
Q ss_pred EEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH----HHcCCCe--EEecCC-CcccHHHHHHHHHHHhCCCc
Q 020768 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN--IVKVST-NLQDIAEEVEKIQKAMGTGI 255 (321)
Q Consensus 184 ~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~----~~~g~~~--vi~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (321)
+++|+|+ +++|...+..+. .|. .|+.+.++.++.+.+ ++.|... .+..+- +.++..+.+.++.+. .+++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~i 78 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL-AGEI 78 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh-cCCC
Confidence 5899998 999988888766 487 677777777665433 2334322 222222 222333333443332 3579
Q ss_pred cEEEEcCCC
Q 020768 256 DVSFDCAGF 264 (321)
Q Consensus 256 d~vid~~g~ 264 (321)
|+++.+.|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999998875
No 479
>PRK06849 hypothetical protein; Provisional
Probab=94.17 E-value=0.79 Score=42.97 Aligned_cols=98 Identities=20% Similarity=0.175 Sum_probs=60.2
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEec---CCCcccHHHHHHHHHHHhCCCcc
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV---STNLQDIAEEVEKIQKAMGTGID 256 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~---~~~~~~~~~~~~~~~~~~~~~~d 256 (321)
...+|||+|+ .+.++..+..++..|. .|+++++++.......+ .++..... ....+++.+.+.++.+ ..++|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~--~~~id 78 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQ--RENID 78 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHH--HcCCC
Confidence 4578999999 6789999999999999 68888877644332211 23333222 1223445666666544 35689
Q ss_pred EEEEcCCCHHHHHHHHHHcccCCEEE
Q 020768 257 VSFDCAGFNKTMSTALSATRAGGKVC 282 (321)
Q Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v 282 (321)
++|-+......+....+.+.++.++.
T Consensus 79 ~vIP~~e~~~~~a~~~~~l~~~~~v~ 104 (389)
T PRK06849 79 LLIPTCEEVFYLSHAKEELSAYCEVL 104 (389)
T ss_pred EEEECChHHHhHHhhhhhhcCCcEEE
Confidence 99987664322333345566655443
No 480
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.17 E-value=0.37 Score=41.65 Aligned_cols=37 Identities=32% Similarity=0.384 Sum_probs=31.0
Q ss_pred CEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhHHH
Q 020768 183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS 220 (321)
Q Consensus 183 ~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~~~ 220 (321)
.+++|+|+ |++|...++.+...|. .|+++++++++.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~ 39 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLE 39 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHH
Confidence 47999998 9999999999988998 5888888776654
No 481
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.16 E-value=0.49 Score=42.76 Aligned_cols=81 Identities=25% Similarity=0.348 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCC-hhHH-HHH---HHcCCCeE-EecCCC-cccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRL-SVA---KELGADNI-VKVSTN-LQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~-~~~~-~~~---~~~g~~~v-i~~~~~-~~~~~~~~~~~~~~~~ 252 (321)
.|.++||+|+ +++|...++.+...|+ .|++++.+ .++. +.+ +..|.... +..+-. .++..+.+....+ .
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence 4678999998 9999999988888999 56666543 2222 222 23343221 111111 1222222233222 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+++|++|.+.|.
T Consensus 88 g~iD~li~nAG~ 99 (306)
T PRK07792 88 GGLDIVVNNAGI 99 (306)
T ss_pred CCCCEEEECCCC
Confidence 579999999874
No 482
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.64 Score=41.15 Aligned_cols=82 Identities=26% Similarity=0.296 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEeCChhH-------H-HH---HHHcCCCe-EEecC-CCcccHHHHHHH
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-------L-SV---AKELGADN-IVKVS-TNLQDIAEEVEK 246 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~~~~~~-------~-~~---~~~~g~~~-vi~~~-~~~~~~~~~~~~ 246 (321)
.+.+++|+|+ |++|...+..+...|+ .|++++++.++ . +. ++..+... .+..+ .+.++..+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4678999998 9999999998888998 57777665432 1 11 22333322 11111 112233333333
Q ss_pred HHHHhCCCccEEEEcCCC
Q 020768 247 IQKAMGTGIDVSFDCAGF 264 (321)
Q Consensus 247 ~~~~~~~~~d~vid~~g~ 264 (321)
+.+. .+.+|++|.+.|.
T Consensus 84 ~~~~-~g~id~li~~ag~ 100 (273)
T PRK08278 84 AVER-FGGIDICVNNASA 100 (273)
T ss_pred HHHH-hCCCCEEEECCCC
Confidence 3222 2479999999884
No 483
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=94.12 E-value=0.6 Score=40.35 Aligned_cols=82 Identities=20% Similarity=0.253 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEE-eCChhHHH-HHH---HcCCCe-EEecCCC-cccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS-VAK---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v-~~~~~~~~-~~~---~~g~~~-vi~~~~~-~~~~~~~~~~~~~~~~ 252 (321)
.+.+++|+|+ |++|...+..+...|.+ ++++ .+++++.+ ... +.+... .+..+-. .....+.+.+..+. .
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAK-VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH-F 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 3689999998 99999999988889995 5444 33333332 222 233221 2222221 12233333333322 3
Q ss_pred CCccEEEEcCCC
Q 020768 253 TGIDVSFDCAGF 264 (321)
Q Consensus 253 ~~~d~vid~~g~ 264 (321)
+.+|++|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 468999999875
No 484
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.11 E-value=0.69 Score=40.53 Aligned_cols=104 Identities=18% Similarity=0.317 Sum_probs=61.2
Q ss_pred CCCEEEEEcC---ChhHHHHHHHHHHcCCCeEEEEeCCh--hHH-HHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHhC
Q 020768 181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD--YRL-SVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 181 ~g~~vlI~Ga---g~vG~~a~qla~~~g~~~vv~v~~~~--~~~-~~~~~~g~~-~vi~~~~-~~~~~~~~~~~~~~~~~ 252 (321)
.+++++|+|+ +++|...++.+...|+ +|+.++++. +.. +..++++.. ..+..+- +.++..+.+.++.+. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH-V 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH-c
Confidence 4678999985 6999999988888999 577665442 332 233444421 1222221 122333333333222 3
Q ss_pred CCccEEEEcCCCHH-----------------------------HHHHHHHHcccCCEEEEEcC
Q 020768 253 TGIDVSFDCAGFNK-----------------------------TMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 253 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~ 286 (321)
+++|++|++.|... ..+.++..++++|+++.++.
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~ 146 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF 146 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence 57999999887420 12345566677788888764
No 485
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.10 E-value=0.49 Score=47.29 Aligned_cols=95 Identities=14% Similarity=0.156 Sum_probs=65.8
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEc
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~ 261 (321)
.++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.- +..+ .+.+++ .+-..+|.++-+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~---~~~L~~---agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-DATR---MDLLES---AGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-eCCC---HHHHHh---cCCCcCCEEEEE
Confidence 3689999999999999999999998 5899999999999999988654332 2211 222222 234568999999
Q ss_pred CCCHHHHHHH---HHHcccCCEEEEE
Q 020768 262 AGFNKTMSTA---LSATRAGGKVCLV 284 (321)
Q Consensus 262 ~g~~~~~~~~---~~~l~~~G~~v~~ 284 (321)
+.+++.-..+ .+.+.|+-+++.-
T Consensus 472 ~~d~~~n~~i~~~ar~~~p~~~iiaR 497 (621)
T PRK03562 472 IDDPQTSLQLVELVKEHFPHLQIIAR 497 (621)
T ss_pred eCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9886543333 3344555555443
No 486
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.09 E-value=0.51 Score=43.10 Aligned_cols=102 Identities=21% Similarity=0.286 Sum_probs=61.5
Q ss_pred EEEEEcCChhHHHHHHHHHHcC----CCeEEEEeC--ChhHHHHHHHcCCCe------------EEecCCCcccHH--HH
Q 020768 184 NVLIMGAGPIGLVTMLGARAFG----APRIVIVDV--DDYRLSVAKELGADN------------IVKVSTNLQDIA--EE 243 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g----~~~vv~v~~--~~~~~~~~~~~g~~~------------vi~~~~~~~~~~--~~ 243 (321)
+|.|.|.|.+|...++.+...+ + .++.+.. +.+...++.++.-.+ .+.+....-... ..
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999987653 5 3555432 233444554433110 001111000000 00
Q ss_pred HHHHHHHhCCCccEEEEcCCCHHHHHHHHHHcccCCEEEEEcCC
Q 020768 244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 287 (321)
Q Consensus 244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 287 (321)
..++.. ...++|+||+|+|.....+.+...+..|++.+.++.+
T Consensus 80 p~~~~w-~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPW-RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccc-cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 111100 1258999999999988888889999999999999866
No 487
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=94.09 E-value=0.34 Score=41.79 Aligned_cols=98 Identities=20% Similarity=0.184 Sum_probs=61.3
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
....++.+||-+|+|. |..+..+++. +. .+++++.+++..+.+++. +.. +.+.. .++.+.. ...+
T Consensus 44 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~--~~~~~--~~~~~~~----~~~~ 112 (233)
T PRK05134 44 AGGLFGKRVLDVGCGG-GILSESMARL-GA-DVTGIDASEENIEVARLHALESGLK--IDYRQ--TTAEELA----AEHP 112 (233)
T ss_pred ccCCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEcCCHHHHHHHHHHHHHcCCc--eEEEe--cCHHHhh----hhcC
Confidence 3456788999999864 6666777764 66 689999988877766542 221 11111 1222211 1124
Q ss_pred CCccEEEE-----cCCC-HHHHHHHHHHcccCCEEEEEc
Q 020768 253 TGIDVSFD-----CAGF-NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 253 ~~~d~vid-----~~g~-~~~~~~~~~~l~~~G~~v~~g 285 (321)
..+|+|+- ...+ ...+..+.+.|+++|++++..
T Consensus 113 ~~fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~ 151 (233)
T PRK05134 113 GQFDVVTCMEMLEHVPDPASFVRACAKLVKPGGLVFFST 151 (233)
T ss_pred CCccEEEEhhHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence 67999964 3333 235678889999999988654
No 488
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.06 E-value=0.64 Score=41.71 Aligned_cols=86 Identities=13% Similarity=0.142 Sum_probs=56.1
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 263 (321)
+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|.... .+..+.+ ...|+||.|+.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~aDivi~~vp 64 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETARQVT--------EQADVIFTMVP 64 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHHHHH--------hcCCEEEEecC
Confidence 37788999999988888888898 68888999998888887775321 1111111 24688888888
Q ss_pred CHHHHHHHH-------HHcccCCEEEEEc
Q 020768 264 FNKTMSTAL-------SATRAGGKVCLVG 285 (321)
Q Consensus 264 ~~~~~~~~~-------~~l~~~G~~v~~g 285 (321)
........+ ..++++-.++..+
T Consensus 65 ~~~~~~~v~~~~~~~~~~~~~g~iivd~s 93 (291)
T TIGR01505 65 DSPQVEEVAFGENGIIEGAKPGKTLVDMS 93 (291)
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEECC
Confidence 654433332 3344544555444
No 489
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.04 E-value=0.39 Score=44.16 Aligned_cols=105 Identities=22% Similarity=0.297 Sum_probs=65.7
Q ss_pred HHHcCC-CCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhC
Q 020768 174 CRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252 (321)
Q Consensus 174 l~~~~~-~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 252 (321)
++...+ +++.+||=+|+|. |..+..+++..+...++++|.+++-.+.+++.....-+.... .+. .++. ...
T Consensus 105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~----e~lp-~~~ 176 (340)
T PLN02490 105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDA----EDLP-FPT 176 (340)
T ss_pred HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccH----HhCC-CCC
Confidence 344444 4678999898865 777777888765457999999988877776532111011100 111 1110 013
Q ss_pred CCccEEEEcCC-----C-HHHHHHHHHHcccCCEEEEEcC
Q 020768 253 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 253 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
..+|+|+.+.. + ...++.+.+.|+++|++++.+.
T Consensus 177 ~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred CceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 45898886421 1 3467899999999999988763
No 490
>PRK07411 hypothetical protein; Validated
Probab=94.04 E-value=0.43 Score=44.81 Aligned_cols=34 Identities=41% Similarity=0.533 Sum_probs=30.0
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCC
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~ 215 (321)
..+|+|.|+|++|..+++.+-..|...+..+|.+
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999999888888643
No 491
>PLN00203 glutamyl-tRNA reductase
Probab=94.02 E-value=0.4 Score=46.67 Aligned_cols=75 Identities=21% Similarity=0.374 Sum_probs=51.6
Q ss_pred CCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEE
Q 020768 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260 (321)
Q Consensus 182 g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid 260 (321)
+.+|+|+|+|.+|.+++..+...|+..++++.++.++.+.+ .+++...+.. ..+. .+.+. -...|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~-----~~~~-dl~~a----l~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIY-----KPLD-EMLAC----AAEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEe-----ecHh-hHHHH----HhcCCEEEE
Confidence 67899999999999999999999987899999998876654 4564211111 0111 11111 246899999
Q ss_pred cCCCHH
Q 020768 261 CAGFNK 266 (321)
Q Consensus 261 ~~g~~~ 266 (321)
|++.+.
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 987654
No 492
>PRK06123 short chain dehydrogenase; Provisional
Probab=94.00 E-value=0.65 Score=40.14 Aligned_cols=81 Identities=20% Similarity=0.245 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChhHHHHHHHHHHcCCCeEEEEe-CChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHhCC
Q 020768 182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 182 g~~vlI~Ga-g~vG~~a~qla~~~g~~~vv~v~-~~~~~~~~----~~~~g~~~-vi~~~~-~~~~~~~~~~~~~~~~~~ 253 (321)
+.++||+|+ |++|...++.+...|+. ++.+. +++++.+. ++..+... .+..+- +.....+.+.++.+. .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYA-VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCe-EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hC
Confidence 457999998 99999998888888985 55443 44433322 23334322 222211 122333333333322 35
Q ss_pred CccEEEEcCCC
Q 020768 254 GIDVSFDCAGF 264 (321)
Q Consensus 254 ~~d~vid~~g~ 264 (321)
.+|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06123 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCCC
Confidence 78999998875
No 493
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=93.99 E-value=0.86 Score=39.82 Aligned_cols=99 Identities=20% Similarity=0.305 Sum_probs=63.9
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHhCC
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGT 253 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
+.....++.+||-+|+|. |..+..+++ .|. .++++|.+++..+.+++... ...+.- +.. .+. ....
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~-----d~~----~~~-~~~~ 102 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG-----DIE----SLP-LATA 102 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc-----Ccc----cCc-CCCC
Confidence 334445678899999865 666655554 565 79999999999988887543 222221 110 110 1134
Q ss_pred CccEEEEcCCC------HHHHHHHHHHcccCCEEEEEcC
Q 020768 254 GIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGM 286 (321)
Q Consensus 254 ~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 286 (321)
.+|+|+....- ...+..+.+.|+++|.+++...
T Consensus 103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 68999864321 2457788899999999987753
No 494
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=93.99 E-value=0.76 Score=43.84 Aligned_cols=106 Identities=21% Similarity=0.242 Sum_probs=62.5
Q ss_pred HHcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 020768 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK 249 (321)
Q Consensus 175 ~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~ 249 (321)
....+++|++||=.|+|+ |..+..+++.++ ...|++++.++++.+.++ .+|.+.+.....+..++. ... .
T Consensus 246 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~---~~~-~ 320 (434)
T PRK14901 246 PLLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLL---ELK-P 320 (434)
T ss_pred HHhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcc---ccc-c
Confidence 345678899988776633 333445555543 236999999998887654 577765332222111111 000 0
Q ss_pred HhCCCccEEEE---cCCC-------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768 250 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 250 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g 285 (321)
.....||.|+- |+|. .+.+..+++.|++||+++..-
T Consensus 321 ~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvyst 384 (434)
T PRK14901 321 QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYAT 384 (434)
T ss_pred cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 01246898874 4442 135788899999999987554
No 495
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=93.97 E-value=1.2 Score=42.26 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=62.8
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHh-------CCCc
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-------GTGI 255 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~-------~~~~ 255 (321)
.+|.|+|.|.+|...+..+...|. .|++.+.++++.+.++. |...+ . .++..+.+.+....+ ....
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~--~---e~~l~~~l~~~~~~g~l~~~~~~~~a 76 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI--V---EPDLDMVVKTAVEGGYLRATTTPEPA 76 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc--C---CCCHHHHHHHHhhcCceeeecccccC
Confidence 579999999999988888888898 69999999999887553 33221 1 123333333221100 1258
Q ss_pred cEEEEcCCCH---------HHH----HHHHHHcccCCEEEEEcCCC
Q 020768 256 DVSFDCAGFN---------KTM----STALSATRAGGKVCLVGMGH 288 (321)
Q Consensus 256 d~vid~~g~~---------~~~----~~~~~~l~~~G~~v~~g~~~ 288 (321)
|++|-|++.+ ..+ +.+...++++..++..+...
T Consensus 77 Dvvii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 77 DAFLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred CEEEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 9999999985 233 33445566655555555433
No 496
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=93.94 E-value=2.6 Score=37.29 Aligned_cols=101 Identities=22% Similarity=0.226 Sum_probs=61.6
Q ss_pred HcCCCCCCEEEEEcCChhHHHHHHHHHHcC-CCeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 020768 176 RANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA 250 (321)
Q Consensus 176 ~~~~~~g~~vlI~Gag~vG~~a~qla~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~ 250 (321)
...+++|++||=.|+|+ |..++.+++.++ ...|++++.++++.+.++ ++|.+.+.....+ .. .+...
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D---~~----~~~~~ 137 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFD---GR----VFGAA 137 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCC---HH----Hhhhh
Confidence 34678999987777643 444445555442 236999999999877664 4566543322221 11 11111
Q ss_pred hCCCccEEEE---cCCC-------------------------HHHHHHHHHHcccCCEEEEEc
Q 020768 251 MGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 251 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g 285 (321)
...+|.|+- |+|. .+.+..+++.|+++|+++...
T Consensus 138 -~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYst 199 (264)
T TIGR00446 138 -VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYST 199 (264)
T ss_pred -ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 235998875 4443 126778889999999987554
No 497
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=93.92 E-value=0.44 Score=42.77 Aligned_cols=39 Identities=26% Similarity=0.268 Sum_probs=33.5
Q ss_pred CEEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHH
Q 020768 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA 222 (321)
Q Consensus 183 ~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~ 222 (321)
.+|.|+|+|.+|...++.+...|. .|+..+.++++.+.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence 579999999999999998888898 688899998887644
No 498
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.92 E-value=0.41 Score=43.06 Aligned_cols=95 Identities=16% Similarity=0.140 Sum_probs=55.6
Q ss_pred EEEEEcCChhHHHHHHHHHHcCCCeEEEEeCChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHhCCCccEEEEcCC
Q 020768 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263 (321)
Q Consensus 184 ~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 263 (321)
+|+|+|+|.+|...+..+...|. .|..+++++++.+.+++.|... . +...........+... ...+|++|-++.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~--~~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAE--LGPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhH--cCCCCEEEEecc
Confidence 58999999999988888888887 5777777777777776656421 0 0000000000001111 156899999988
Q ss_pred CHHHHHHHH----HHcccCCEEEEEc
Q 020768 264 FNKTMSTAL----SATRAGGKVCLVG 285 (321)
Q Consensus 264 ~~~~~~~~~----~~l~~~G~~v~~g 285 (321)
... ...++ ..+.++..++.+.
T Consensus 76 ~~~-~~~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 76 AYQ-LPAALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred ccc-HHHHHHHHhhhcCCCCEEEEec
Confidence 643 33333 3444455666543
No 499
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=93.92 E-value=0.99 Score=39.55 Aligned_cols=106 Identities=12% Similarity=0.161 Sum_probs=69.7
Q ss_pred cCCCCCCEEEEEcCChhHHHHHHHHHHcCC-CeEEEEeCChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHh
Q 020768 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM 251 (321)
Q Consensus 177 ~~~~~g~~vlI~Gag~vG~~a~qla~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 251 (321)
.+....++||-+|. .+|+.++.+|+.++- .++++++.+++..+.++ +.|...-+.+.. .+..+.+.++...+
T Consensus 75 ~~~~~ak~iLEiGT-~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~~ 151 (247)
T PLN02589 75 LKLINAKNTMEIGV-YTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIEDG 151 (247)
T ss_pred HHHhCCCEEEEEeC-hhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhcc
Confidence 34455678888885 568888888887631 27999999988777664 456544333322 34555555553321
Q ss_pred --CCCccEEEEcCCCH---HHHHHHHHHcccCCEEEEEc
Q 020768 252 --GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVG 285 (321)
Q Consensus 252 --~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 285 (321)
.+.||+||--.... ..++.+++.|++||.++.=.
T Consensus 152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~DN 190 (247)
T PLN02589 152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_pred ccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEEcC
Confidence 25799998754432 35778899999999987554
No 500
>PRK11761 cysM cysteine synthase B; Provisional
Probab=93.87 E-value=2.6 Score=37.95 Aligned_cols=59 Identities=20% Similarity=0.270 Sum_probs=46.2
Q ss_pred HHHcCCCCCCEEEEEcCChhHHHHHHHHHHcCCCeEEEEeC--ChhHHHHHHHcCCCeEEe
Q 020768 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVK 232 (321)
Q Consensus 174 l~~~~~~~g~~vlI~Gag~vG~~a~qla~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vi~ 232 (321)
.+...+.+|++|+....|..|++.+..|+.+|.+.++++.. +++|.+.++.+|++.+..
T Consensus 55 ~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~ 115 (296)
T PRK11761 55 EKRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILV 115 (296)
T ss_pred HHcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEe
Confidence 34555678888766666999999999999999987777753 458888999999876654
Done!