BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020773
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GY87|UBC26_ARATH Probable ubiquitin-conjugating enzyme E2 26 OS=Arabidopsis thaliana
GN=UBC26 PE=2 SV=2
Length = 543
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 126/265 (47%), Gaps = 63/265 (23%)
Query: 98 DNYGN----MDDYADDDYEYDDTDMYEDNYATMQSQFDNVDLPPGVEASLPW-------- 145
D YG+ ++A+ + DD MY+D D D+P G E ++PW
Sbjct: 86 DYYGHKNIPFSEFANQPIDVDDYSMYQD-------VLDPKDVPAGAEVTVPWGLNSSSKG 138
Query: 146 -----------------------------LKDIASSQDVTSVSSTTSISDLSESKRKATI 176
L D Q ++ S+ S S + +
Sbjct: 139 TAKSSISIMRSQSMKGYGTVSLATTNVPQLWDYTLPQQNQAIYSSVSFSAVQPQTPDVVM 198
Query: 177 ---------SYLGESKSKLAFVSHSTASVESISDEKEEKEESRVMANIQGFKQFDTVDDF 227
SY + S + +SV+ S+ ++ KEE ++ FK+FDTV+DF
Sbjct: 199 VTNPTPNPFSYDASASSSHPIAAEPISSVQDSSNARKLKEEF-----LRDFKRFDTVEDF 253
Query: 228 SDHHYNRMGFLGEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSG 287
SDHHY G ++ KNW KK+Q +WKILE +LP+ I VR CE+RM+LLRAV+IG G
Sbjct: 254 SDHHYASKG-KSSKQHSKNWVKKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEG 312
Query: 288 TPYHDGLFVFDCIFPPSYPNEPPVV 312
TPYHDGLF FD FP +YP+ PP V
Sbjct: 313 TPYHDGLFFFDIQFPDTYPSVPPNV 337
>sp|Q9LUQ5|UBC25_ARATH Probable ubiquitin-conjugating enzyme E2 25 OS=Arabidopsis thaliana
GN=UBC25 PE=2 SV=1
Length = 609
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 83/113 (73%), Gaps = 8/113 (7%)
Query: 207 EESRVMANIQG-------FKQFDTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILE 259
++SRV N++ FK+FD V+DFSDHHY G ++ K+WAK+IQ+EW+ILE
Sbjct: 287 DDSRVKRNMEDYLGLYLFFKRFDIVEDFSDHHYASKGTTSKQHS-KDWAKRIQDEWRILE 345
Query: 260 KNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVV 312
K+LP+ IFVR E+RM+LLRAV+IG GTPYHDGLF FD FP +YP+ PP+V
Sbjct: 346 KDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIV 398
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 95 DNDDNYGNMDDYADDDYEYDDTDMYEDNYATMQSQFDNVDLPPGVEASLPWLKDIA 150
++D+NY D+ + + DNY+ Q FD D+P GVE S+ W + A
Sbjct: 104 EDDENYSEQYDF--------EMEAEPDNYSMYQDLFDGKDIPTGVEVSMDWFPNSA 151
>sp|Q8VY10|UBC24_ARATH Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana
GN=UBC24 PE=2 SV=1
Length = 907
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 218 FKQFDTVDDFSDHHY-NRMGFLGEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARME 276
F+QFD V+D SDHH+ + L + + K+W KK+Q+EW LE NLP+TI+VRVCE RM+
Sbjct: 633 FRQFDMVNDCSDHHFLSSDKGLAQSQVTKSWVKKVQQEWSNLEANLPNTIYVRVCEERMD 692
Query: 277 LLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVV 312
LLRA ++G GTPYHDGLF FD + PP YP+EPP+V
Sbjct: 693 LLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMV 728
>sp|Q9ZVX1|UBC23_ARATH Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana
GN=UBC23 PE=3 SV=1
Length = 1102
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 218 FKQFDTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMEL 277
F++FD D DHH+ +G G++ + W KK+ ++WKIL+ NLPD IFVR E RM+L
Sbjct: 824 FRRFDISQDPLDHHF--LGVDGQKTKERQWFKKVDQDWKILQNNLPDGIFVRAYEDRMDL 881
Query: 278 LRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVF 313
LRAV++G GTPY DGLF FD P YP+ PP +
Sbjct: 882 LRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAY 917
>sp|Q6ZPJ3|UBE2O_MOUSE Ubiquitin-conjugating enzyme E2 O OS=Mus musculus GN=Ube2o PE=1 SV=3
Length = 1288
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 228 SDHHYNRMGFLGEEKPP--KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGP 285
S+H + ++ F +PP K + +++E +L +LPD I V+ E RM+L A++ GP
Sbjct: 934 SNHSFKKIEF----QPPEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALIKGP 989
Query: 286 SGTPYHDGLFVFDCIFPPSYPNEPP 310
+ TPY DGL++FD P YP PP
Sbjct: 990 TRTPYEDGLYLFDIQLPNIYPAVPP 1014
>sp|Q9C0C9|UBE2O_HUMAN Ubiquitin-conjugating enzyme E2 O OS=Homo sapiens GN=UBE2O PE=1 SV=3
Length = 1292
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 228 SDHHYNRMGFLGEEKPP--KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGP 285
S+H + ++ F +PP K + +++E +L +LP+ I V+ E RM+L A++ GP
Sbjct: 937 SNHSFKKIEF----QPPEAKKFFSTVRKEMALLATSLPEGIMVKTFEDRMDLFSALIKGP 992
Query: 286 SGTPYHDGLFVFDCIFPPSYPNEPP 310
+ TPY DGL++FD P YP PP
Sbjct: 993 TRTPYEDGLYLFDIQLPNIYPAVPP 1017
>sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6
PE=1 SV=2
Length = 4857
Score = 59.3 bits (142), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Query: 136 PPGVEASLPWLKDIASSQDVTSVSSTTSISDLSESKRKATISYLGESKSKLAFVSHSTAS 195
P G+ +P DI + ++ ++TTS+ ++ K+ LGE K A +
Sbjct: 4471 PEGLTLLVP---DIQKTAEIV-YAATTSLRQANQEKK------LGEYSKKAAMKPKPLSV 4520
Query: 196 VESISDEKEEKEESRVMANIQGFKQFDTVDDFSDHHYNRMGF------LGEEKPPKNW-- 247
++S+ E++ VM +Q FDT + S+ ++GF + + K +
Sbjct: 4521 LKSL-----EEKYVAVMKKLQ----FDTFEMVSEDEDGKLGFKVNYHYMSQVKNANDANS 4571
Query: 248 ---AKKIQEE----WKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCI 300
A+++ +E L + ++FVR E R+++++ ++ GP+ TPY +G F FD
Sbjct: 4572 AARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVY 4631
Query: 301 FPPSYPNEPPVVFITIQGA 319
FP YP+ PP+V + G
Sbjct: 4632 FPQDYPSSPPLVNLETTGG 4650
>sp|O88738|BIRC6_MOUSE Baculoviral IAP repeat-containing protein 6 OS=Mus musculus GN=Birc6
PE=1 SV=2
Length = 4882
Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 266 IFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGA 319
+FVR E R+++++ ++ GP+ TPY +G F FD FP YP+ PP+V + G
Sbjct: 4622 VFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGG 4675
>sp|Q11076|UBC17_CAEEL Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis
elegans GN=ubc-17 PE=3 SV=3
Length = 728
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 219 KQFDTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELL 278
K+ ++ FS H +R K AK++ L N ++I+V E R++++
Sbjct: 388 KEAKNINPFSPHLRDRT---------KRIAKELASIANALPLNASNSIYVCYDEGRVDII 438
Query: 279 RAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPP-VVFIT 315
+ ++ GP TPY +GLF FD FP YP PP F+T
Sbjct: 439 KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLT 476
>sp|Q7ZY08|UBE2T_XENLA Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2
SV=1
Length = 192
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 250 KIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEP 309
+++ E ++L K P + E+ M+ LRA +IG SG+PY G+F + I P YP EP
Sbjct: 6 RLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEP 65
Query: 310 P-VVFIT 315
P + F+T
Sbjct: 66 PKIRFLT 72
>sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana
GN=COP10 PE=1 SV=1
Length = 182
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 280 AVMIGPSGTPYHDGLFVFDCIFPPSYPNEPP-VVFIT 315
A +IGPSGTPY G+F D IFP YP +PP +VF T
Sbjct: 70 ATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKT 106
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica
GN=UBC5A PE=2 SV=1
Length = 147
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+K+IQ+E K L+K+ P + M +A ++GPS +PY G+F+ FPP YP
Sbjct: 3 SKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPF 62
Query: 308 EPPVV 312
+PP V
Sbjct: 63 KPPKV 67
>sp|Q4PFA5|UBC2_USTMA Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=UBC2 PE=3 SV=1
Length = 185
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
K++ ++K L + P I C + + AV+ GP+ TP+ DG F F SYPN+
Sbjct: 7 KRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPTV 70
>sp|Q9FI61|UBC27_ARATH Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana GN=UBC27
PE=2 SV=1
Length = 192
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 250 KIQEEWKILEKNLPDTIFVRVCEARMELLR--AVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+IQ+E + E+N D+ +RVC L R + GP GTPY G F D P YP
Sbjct: 6 RIQKELQDCERN-QDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPF 64
Query: 308 EPP 310
EPP
Sbjct: 65 EPP 67
>sp|P33296|UBC6_YEAST Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC6 PE=1 SV=1
Length = 250
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
K++ +E+K++ +N P I R E + ++ GP+ TPY G + FP YP +
Sbjct: 8 KRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYK 67
Query: 309 PPVV-FITIQG 318
PP + IT G
Sbjct: 68 PPAIRMITPNG 78
>sp|Q8S919|UBC5B_ORYSJ Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica
GN=UBC5B PE=2 SV=1
Length = 148
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+K+I +E K L+K+ P + M +A ++GPS +PY G+F+ FPP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPF 62
Query: 308 EPPVVFI 314
+PP V +
Sbjct: 63 KPPKVAL 69
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K L+++ P + E + + AV+ GP GTP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPTV 70
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K L+++ P + E + + AV+ GP GTP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPTV 70
>sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1
SV=1
Length = 148
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+K+I +E K L+K+ P + M +A ++GPS +PY G+F+ FPP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 308 EPPVV 312
+PP V
Sbjct: 63 KPPKV 67
>sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28
PE=2 SV=1
Length = 148
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+K+I +E K L+K+ P + M +A ++GPS +PY G+F+ FPP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 308 EPPVV 312
+PP V
Sbjct: 63 KPPKV 67
>sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10
PE=1 SV=1
Length = 148
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+K+I +E K L+K+ P + M +A ++GPS +PY G+F+ FPP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 308 EPPVV 312
+PP V
Sbjct: 63 KPPKV 67
>sp|Q74Z34|UBC6_ASHGO Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC6
PE=3 SV=1
Length = 242
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
K++ +E+K++ +N P I E + + V+ GP TPY DG + +FP YP
Sbjct: 8 KRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFN 67
Query: 309 PPVV 312
PP +
Sbjct: 68 PPAI 71
>sp|P23566|UBC2_SCHPO Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rhp6 PE=1 SV=3
Length = 151
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K ++++ P + + L AV+IGP+ TP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNK 66
Query: 309 PPVV 312
PP+V
Sbjct: 67 PPLV 70
>sp|Q9NPD8|UBE2T_HUMAN Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1
SV=1
Length = 197
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
A +++ E +L P I + +M+ LRA ++G + TPY G+F + I P YP
Sbjct: 4 ASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPF 63
Query: 308 EPP-VVFIT 315
EPP + F+T
Sbjct: 64 EPPQIRFLT 72
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2
SV=1
Length = 148
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+K+I +E K L+K+ P + M +A ++GP+ +PY G+F+ FPP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPF 62
Query: 308 EPPVV 312
+PP V
Sbjct: 63 KPPKV 67
>sp|Q54I43|UBE2S_DICDI Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum
GN=ube2s PE=3 SV=1
Length = 215
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 238 LGEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVF 297
+ E P + K++ +E K L + + I + CE + + AV+ GP+GTPY G F
Sbjct: 1 MSSENLPPDVIKRVVKELKELNSSTLEGITLLPCEEDITNIEAVVTGPAGTPYEGGYFKA 60
Query: 298 DCIFPPSYPNEPPVV-FIT 315
I +P PP FIT
Sbjct: 61 RLILSSDFPRSPPKANFIT 79
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8
PE=1 SV=1
Length = 148
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+K+I +E K L+K+ P + M +A ++GP+ +PY G+F+ FPP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 308 EPPVV 312
+PP V
Sbjct: 63 KPPKV 67
>sp|Q08BH7|UBE2T_DANRE Ubiquitin-conjugating enzyme E2 T OS=Danio rerio GN=ube2t PE=2 SV=1
Length = 194
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 250 KIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEP 309
+++ E ++L P + E R++ L+A ++G + TPY G+F + P YP EP
Sbjct: 6 RLKREMQLLTAEPPPGVSCWQSEGRLDELQAQIVGGANTPYEGGVFTLEINIPERYPFEP 65
Query: 310 P-VVFIT 315
P + F+T
Sbjct: 66 PKMRFLT 72
>sp|Q9FF66|UBC22_ARATH Ubiquitin-conjugating enzyme E2 22 OS=Arabidopsis thaliana GN=UBC22
PE=1 SV=1
Length = 251
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 241 EKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCI 300
E P N K++ +E K L+++ PD I V V + + A + GP GTPY +GLF
Sbjct: 5 ENLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLA 64
Query: 301 FPPSYPNEPP 310
+P+ PP
Sbjct: 65 LSHDFPHSPP 74
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K L+++ P + E + AV+ GP GTP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPTV 70
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K L+++ P + E + AV+ GP GTP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPTV 70
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K L+++ P + E + AV+ GP GTP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPTV 70
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K L+++ P + E + AV+ GP GTP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPTV 70
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K L+++ P + E + AV+ GP GTP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPTV 70
>sp|Q9CQ37|UBE2T_MOUSE Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2
SV=1
Length = 204
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
A ++++E +L P I + ++ LRA ++G + TPY G+F + I P YP
Sbjct: 4 ASRLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPF 63
Query: 308 EPP-VVFIT 315
EPP V F+T
Sbjct: 64 EPPQVRFLT 72
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
+K+I +E K L+K+ P M +A ++GP +PY G+F+ FPP YP
Sbjct: 3 SKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPF 62
Query: 308 EPPVV 312
+PP V
Sbjct: 63 KPPKV 67
>sp|P21734|UBC1_YEAST Ubiquitin-conjugating enzyme E2 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC1 PE=1 SV=1
Length = 215
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 248 AKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYP 306
AK+I +E + ++ + I + V E+ + L+ +GP GTPY G FV D P YP
Sbjct: 4 AKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYP 63
Query: 307 NEPP 310
+PP
Sbjct: 64 FKPP 67
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K L+++ P + E + A++ GP TP+ DG F F YPN+
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 309 PPVV-FIT 315
PP V FI+
Sbjct: 67 PPTVKFIS 74
>sp|Q6FQK7|UBC6_CANGA Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC6 PE=3 SV=1
Length = 246
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPS 304
K K++ +E+K++ +N P I R E + V+ GP TPY G + FP
Sbjct: 4 KQAQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSD 63
Query: 305 YPNEPPVV-FITIQG 318
YP +PP + IT G
Sbjct: 64 YPYKPPAIRMITPNG 78
>sp|Q32LD2|UBE2T_BOVIN Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=2
Length = 195
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 250 KIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEP 309
+++ E +L P I RME LRA ++G + TPY G+F + P YP EP
Sbjct: 6 RLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEP 65
Query: 310 P-VVFIT 315
P + F+T
Sbjct: 66 PQIRFLT 72
>sp|P0C8G4|UBC_ASFP4 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC
PE=2 SV=1
Length = 217
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
++ + E++ L +N + V V E M ++ GP+ T Y GLF FPP+YP
Sbjct: 3 SRFLMAEYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPY 62
Query: 308 EPPVVFIT 315
EPP + T
Sbjct: 63 EPPRLTFT 70
>sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana GN=UBC29
PE=2 SV=1
Length = 148
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
++I +E K L+++ P + M +A ++GP+ +PY G+F+ + FPP YP
Sbjct: 3 TRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPF 62
Query: 308 EPP-VVFIT 315
+PP VVF T
Sbjct: 63 KPPKVVFRT 71
>sp|Q5UQ88|UBC3_MIMIV Probable ubiquitin-conjugating enzyme E2 R521 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R521 PE=3 SV=1
Length = 1441
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 245 KNWAKKIQEEWKILEKNLP----DTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCI 300
K+ K I E KNLP +I+ R + ++ GP +PY G F F
Sbjct: 1212 KDALKAISRELLSHSKNLPVEYGSSIYYRYSPENIRYHEFIITGPEDSPYDSGCFHFRMY 1271
Query: 301 FPPSYPNEPPVVFITIQG 318
P +YPN P V +T G
Sbjct: 1272 NPSAYPNTSPFVSMTTTG 1289
>sp|Q3UE37|UBE2Z_MOUSE Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus GN=Ube2z PE=1
SV=2
Length = 356
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 239 GEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFD 298
GE P+ +I+ + + K P +FV M + A++ GP TPY G F+F
Sbjct: 95 GERTAPQC-LLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFV 153
Query: 299 CIFPPSYPNEPPVVFITIQG 318
PP YP PP V + G
Sbjct: 154 FRCPPDYPIHPPRVKLMTTG 173
>sp|Q6C093|UBC2_YARLI Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=UBC2 PE=3 SV=1
Length = 151
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNE 308
+++ ++K ++++ P + + AV+IGP+ TP+ DG F F YPN+
Sbjct: 7 RRLMRDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNK 66
Query: 309 PPVV 312
PP V
Sbjct: 67 PPAV 70
>sp|Q3B7D1|UBE2Z_RAT Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus GN=Ube2z
PE=2 SV=2
Length = 356
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 239 GEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFD 298
GE P+ +I+ + + K P +FV M + A++ GP TPY G F+F
Sbjct: 95 GERTAPQC-LLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFV 153
Query: 299 CIFPPSYPNEPPVVFITIQG 318
PP YP PP V + G
Sbjct: 154 FRCPPDYPIHPPRVKLMTTG 173
>sp|Q9H832|UBE2Z_HUMAN Ubiquitin-conjugating enzyme E2 Z OS=Homo sapiens GN=UBE2Z PE=1
SV=2
Length = 354
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 239 GEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFD 298
GE P+ +I+ + + K P +FV M + A++ GP TPY G F+F
Sbjct: 93 GERTAPQC-LLRIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFV 151
Query: 299 CIFPPSYPNEPPVVFITIQG 318
PP YP PP V + G
Sbjct: 152 FRCPPDYPIHPPRVKLMTTG 171
>sp|Q66KB0|UBE2Z_XENTR Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z
PE=2 SV=2
Length = 313
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 250 KIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEP 309
+I+ + + K P +FV M + A++ GP TPY G F+F PP YP P
Sbjct: 62 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHP 121
Query: 310 PVVFITIQG 318
P V + G
Sbjct: 122 PRVKLMTTG 130
>sp|Q6PCF7|UBE2Z_XENLA Ubiquitin-conjugating enzyme E2 Z OS=Xenopus laevis GN=ube2z PE=2
SV=2
Length = 313
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 250 KIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEP 309
+I+ + + K P +FV M + A++ GP TPY G F+F PP YP P
Sbjct: 62 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHP 121
Query: 310 PVVFITIQG 318
P V + G
Sbjct: 122 PRVKLMTTG 130
>sp|P0C8G3|UBC_ASFK5 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1
Length = 218
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPN 307
++ + E++ L +N + V V E + ++ GPS T Y GLF FPP+YP
Sbjct: 3 SRFLLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPY 62
Query: 308 EPPVVFIT 315
EPP + T
Sbjct: 63 EPPKLTFT 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,736,361
Number of Sequences: 539616
Number of extensions: 5373681
Number of successful extensions: 31983
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 419
Number of HSP's that attempted gapping in prelim test: 21064
Number of HSP's gapped (non-prelim): 2804
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)