Query 020773
Match_columns 321
No_of_seqs 254 out of 1289
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 07:58:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020773.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020773hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ceg_A Baculoviral IAP repeat- 99.9 1.1E-22 3.7E-27 194.8 11.3 114 204-318 27-152 (323)
2 2h2y_A Ubiquitin-conjugating e 99.9 6.5E-22 2.2E-26 167.2 12.7 76 245-320 19-95 (136)
3 2ayv_A Ubiquitin-conjugating e 99.9 3.8E-22 1.3E-26 174.0 11.5 79 242-320 17-95 (166)
4 1yrv_A Ubiquitin-conjugating l 99.9 3.9E-22 1.3E-26 174.6 10.7 85 236-320 13-97 (169)
5 1zdn_A Ubiquitin-conjugating e 99.9 7.7E-22 2.6E-26 170.1 12.4 79 242-320 9-87 (158)
6 2c4o_A Ubiquitin-conjugating e 99.9 1.5E-21 5.1E-26 169.9 11.8 79 242-320 15-93 (165)
7 1ayz_A UBC2, ubiquitin-conjuga 99.9 1.2E-21 4E-26 171.4 11.1 78 243-320 1-78 (169)
8 2fo3_A Ubiquitin-conjugating e 99.9 1.1E-21 3.9E-26 163.2 10.3 75 246-320 6-81 (125)
9 2ucz_A UBC7, ubiquitin conjuga 99.9 2E-21 6.9E-26 168.1 12.0 78 243-320 1-79 (165)
10 4gpr_A Ubiquitin-conjugating e 99.9 2.1E-21 7.3E-26 166.0 11.7 77 244-320 2-78 (151)
11 2c2v_B Ubiquitin-conjugating e 99.9 1.3E-21 4.6E-26 167.9 10.3 77 244-320 3-79 (154)
12 2pwq_A Ubiquitin conjugating e 99.9 1.9E-21 6.5E-26 176.6 11.8 79 242-320 19-97 (216)
13 2awf_A Ubiquitin-conjugating e 99.9 2E-21 6.7E-26 170.2 11.4 78 243-320 14-92 (172)
14 2a7l_A Hypothetical ubiquitin- 99.9 5.5E-22 1.9E-26 168.4 7.6 77 242-319 19-97 (136)
15 2aak_A UBC1, ubiquitin conjuga 99.9 2.1E-21 7.2E-26 165.9 11.2 78 243-320 1-78 (152)
16 2e2c_A Ubiquitin conjugating e 99.9 2E-21 6.9E-26 166.9 10.9 79 242-320 5-83 (156)
17 1yh2_A HSPC150 protein similar 99.9 3.4E-21 1.1E-25 167.9 11.9 77 244-320 2-78 (169)
18 1z2u_A Ubiquitin-conjugating e 99.8 2.7E-21 9.3E-26 164.9 10.9 77 244-320 2-78 (150)
19 3h8k_A Ubiquitin-conjugating e 99.8 4E-21 1.4E-25 165.8 11.9 76 245-320 2-78 (164)
20 2a4d_A Ubiquitin-conjugating e 99.8 6.7E-21 2.3E-25 166.0 12.1 82 239-320 18-103 (160)
21 3rcz_B SUMO-conjugating enzyme 99.8 4.1E-21 1.4E-25 167.0 10.4 78 243-320 7-89 (163)
22 1fxt_A Ubiquitin-conjugating e 99.8 3.8E-21 1.3E-25 163.9 9.1 74 247-320 2-76 (149)
23 3rz3_A Ubiquitin-conjugating e 99.8 8.8E-21 3E-25 167.3 11.5 78 243-320 4-82 (183)
24 2hlw_A Ubiquitin-conjugating e 99.8 1E-20 3.5E-25 166.0 11.7 101 220-320 9-113 (170)
25 2r0j_A Ubiquitin carrier prote 99.8 7.2E-21 2.5E-25 162.4 10.4 73 248-320 3-75 (149)
26 2gjd_A Ubiquitin-conjugating e 99.8 6.3E-21 2.2E-25 164.2 10.0 78 243-320 1-83 (157)
27 2f4w_A Ubiquitin-conjugating e 99.8 8E-21 2.7E-25 168.6 10.7 76 242-317 10-85 (187)
28 2grr_A Ubiquitin-conjugating e 99.8 8.4E-21 2.9E-25 164.0 10.4 79 242-320 3-86 (161)
29 2q0v_A Ubiquitin-conjugating e 99.8 1.5E-20 5E-25 162.8 11.9 79 242-320 17-99 (156)
30 1i7k_A Ubiquitin-conjugating e 99.8 6.2E-21 2.1E-25 168.6 9.7 78 243-320 27-104 (179)
31 1jat_A Ubiquitin-conjugating e 99.8 4.8E-21 1.6E-25 164.4 8.7 75 246-320 5-79 (155)
32 2bep_A Ubiquitin-conjugating e 99.8 1.3E-20 4.4E-25 162.3 11.3 79 242-320 4-85 (159)
33 3bzh_A Ubiquitin-conjugating e 99.8 2E-20 6.7E-25 167.2 11.6 76 245-320 47-122 (194)
34 1jat_B Ubiquitin-conjugating e 99.8 3.7E-20 1.3E-24 156.4 10.9 76 245-320 5-84 (138)
35 3k9o_A Ubiquitin-conjugating e 99.8 2E-20 7E-25 166.7 9.8 78 243-320 2-82 (201)
36 2f4z_A Tgtwinscan_2721 - E2 do 99.8 2.3E-20 7.9E-25 166.8 10.0 77 244-320 30-119 (193)
37 2y9m_A Ubiquitin-conjugating e 99.8 1.2E-19 4E-24 158.7 11.2 79 242-320 2-93 (172)
38 1wzv_A Ubiquitin-conjugating e 99.8 8.1E-20 2.8E-24 156.6 9.2 74 246-320 4-78 (155)
39 3fn1_B NEDD8-conjugating enzym 99.8 1.3E-19 4.3E-24 157.1 10.5 78 242-320 10-88 (167)
40 3e46_A Ubiquitin-conjugating e 99.8 1.7E-19 5.9E-24 167.3 11.3 79 242-320 53-134 (253)
41 4ds2_A Ubiquitin-conjugating e 99.8 6.9E-20 2.4E-24 159.1 7.5 79 242-320 4-96 (167)
42 1y8x_A Ubiquitin-conjugating e 99.8 3.6E-19 1.2E-23 154.0 9.5 74 244-320 4-78 (160)
43 2z5d_A Ubiquitin-conjugating e 99.8 2.9E-19 1E-23 158.2 8.9 75 242-320 19-95 (179)
44 1tte_A Ubiquitin-conjugating e 99.8 8.5E-20 2.9E-24 165.7 4.5 75 246-320 2-77 (215)
45 2onu_A Ubiquitin-conjugating e 99.8 2.1E-19 7.2E-24 154.3 6.3 71 247-320 3-73 (152)
46 2nvu_C NEDD8-conjugating enzym 99.8 5.1E-19 1.8E-23 156.2 8.9 76 242-320 22-98 (180)
47 4ddg_A Ubiquitin-conjugating e 99.8 8.6E-19 2.9E-23 170.6 11.3 76 245-320 2-77 (399)
48 1c4z_D UBCH7, ubiquitin conjug 99.8 3.4E-19 1.2E-23 152.5 5.2 73 247-320 3-76 (154)
49 1zuo_A Hypothetical protein LO 99.8 5.5E-19 1.9E-23 156.8 6.7 79 242-320 23-116 (186)
50 1yf9_A Ubiquitin carrier prote 99.7 6.8E-18 2.3E-22 147.9 8.7 71 246-320 12-82 (171)
51 3o2u_A NEDD8-conjugating enzym 99.7 1.2E-17 4.2E-22 148.5 8.8 76 242-320 25-107 (190)
52 2z6o_A UFM1-conjugating enzyme 99.5 8.7E-15 3E-19 129.6 1.7 69 243-317 29-107 (172)
53 3kpa_A Probable ubiquitin fold 98.7 5.1E-09 1.7E-13 91.9 1.5 68 244-317 32-109 (168)
54 3r3q_A Suppressor protein STP2 97.9 2.7E-05 9.3E-10 68.1 7.2 68 249-316 31-104 (162)
55 3obq_A Tumor susceptibility ge 96.9 0.0011 3.8E-08 57.1 5.3 61 251-317 25-92 (146)
56 2ebm_A RWD domain-containing p 96.4 0.029 1E-06 45.3 10.3 73 246-320 10-83 (128)
57 2yz0_A Serine/threonine-protei 94.7 0.27 9.3E-06 40.1 10.3 74 245-320 9-90 (138)
58 1ukx_A GCN2, GCN2 EIF2alpha ki 94.5 0.22 7.4E-06 40.5 9.2 76 244-320 8-91 (137)
59 2day_A Ring finger protein 25; 94.4 0.23 7.9E-06 40.0 9.0 69 249-317 11-83 (128)
60 2ebk_A RWD domain-containing p 92.2 0.18 6.2E-06 40.8 5.1 70 250-320 11-83 (128)
61 2daw_A RWD domain containing p 91.9 0.71 2.4E-05 39.0 8.6 72 244-319 12-101 (154)
62 2dax_A Protein C21ORF6; RWD do 87.2 1.8 6.2E-05 36.0 7.4 71 245-319 7-99 (152)
63 3zqs_A E3 ubiquitin-protein li 58.3 26 0.00087 31.2 7.0 56 249-314 4-59 (186)
64 2bum_A Protocatechuate 3,4-dio 29.0 45 0.0015 29.8 3.8 26 291-316 109-139 (209)
65 2js3_A Uncharacterized protein 22.7 17 0.0006 28.8 -0.1 12 139-150 59-70 (96)
No 1
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=194.85 Aligned_cols=114 Identities=32% Similarity=0.597 Sum_probs=93.9
Q ss_pred hhhHHHHHHhhhcCCcceecccCCCC--------CcccccCCCCCCCCChHHHHHHHHHHHHHHhCCCC----ceEEEec
Q 020773 204 EEKEESRVMANIQGFKQFDTVDDFSD--------HHYNRMGFLGEEKPPKNWAKKIQEEWKILEKNLPD----TIFVRVC 271 (321)
Q Consensus 204 ~~~~e~~v~~~~~~fkqFd~V~~~sD--------Hhf~~~~~~~~~~~ss~a~KRLqKElk~Lqkd~P~----gI~V~p~ 271 (321)
+++...+.| +..+|.+|++|.+.+| |||..........++..+.+||++|++.|++++|+ ++++.+.
T Consensus 27 ~~~~y~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ 105 (323)
T 3ceg_A 27 LEEKYVAVM-KKLQFDTFEMVSEDEDGKLGFKVNYHYMSQVKNANDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCD 105 (323)
T ss_dssp HHHHHHHHH-HTTSEEEECCEEECTTSCEEESSCCTTHHHHHTCCCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEE
T ss_pred HHHHHHHHH-HHhcCceeeecccccccccccccchHHHhhhhccCCCCCHHHHHHHHHHHHHHHhCCCCCcccceeeccc
Confidence 344444443 3457999999997765 67754322222257889999999999999999887 4567888
Q ss_pred CCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCC
Q 020773 272 EARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQG 318 (321)
Q Consensus 272 EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~g 318 (321)
++|++.|+|+|.||++|||+||+|+|+|.||++||++||+|+|+|++
T Consensus 106 ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~ 152 (323)
T 3ceg_A 106 EERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTG 152 (323)
T ss_dssp SSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCST
T ss_pred CCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccC
Confidence 99999999999999999999999999999999999999999999983
No 2
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.87 E-value=6.5e-22 Score=167.18 Aligned_cols=76 Identities=25% Similarity=0.431 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCC-CC
Q 020773 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQG-AS 320 (321)
Q Consensus 245 s~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~g-lr 320 (321)
..+.+||++|+++|++++|.||.+.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+. +|
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 95 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKH 95 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999985 65
No 3
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.87 E-value=3.8e-22 Score=173.96 Aligned_cols=79 Identities=28% Similarity=0.431 Sum_probs=74.2
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.....+.+||++|++.|++++++||.+.+.++|+..|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+.+|
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 17 LYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp --CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred ccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcC
Confidence 4566789999999999999999999999999999999999999999999999999999999999999999999998765
No 4
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.87 E-value=3.9e-22 Score=174.56 Aligned_cols=85 Identities=15% Similarity=0.155 Sum_probs=77.4
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEE
Q 020773 236 GFLGEEKPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFIT 315 (321)
Q Consensus 236 ~~~~~~~~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFl 315 (321)
+......|+..+.+||+||+++|++++++||.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+
T Consensus 13 ~~~~~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 92 (169)
T 1yrv_A 13 GLVPRGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFI 92 (169)
T ss_dssp --CCTTGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEES
T ss_pred cccccCccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceec
Confidence 33333367888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 020773 316 IQGAS 320 (321)
Q Consensus 316 T~glr 320 (321)
|+.+|
T Consensus 93 T~i~H 97 (169)
T 1yrv_A 93 TIPFH 97 (169)
T ss_dssp SCCCC
T ss_pred CCCcc
Confidence 98765
No 5
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.87 E-value=7.7e-22 Score=170.06 Aligned_cols=79 Identities=27% Similarity=0.449 Sum_probs=76.6
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.++..+.+||++|++.|++++++||++.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+..|
T Consensus 9 ~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 87 (158)
T 1zdn_A 9 NLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFH 87 (158)
T ss_dssp CSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred ccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCccc
Confidence 6888999999999999999999999999999999999999999999999999999999999999999999999999876
No 6
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.86 E-value=1.5e-21 Score=169.89 Aligned_cols=79 Identities=27% Similarity=0.437 Sum_probs=74.9
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
...+.+.+||++|++.|++++++||.+.+.++|+..|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+..|
T Consensus 15 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~H 93 (165)
T 2c4o_A 15 PRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 93 (165)
T ss_dssp -CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcC
Confidence 5677899999999999999999999999999999999999999999999999999999999999999999999998765
No 7
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.86 E-value=1.2e-21 Score=171.36 Aligned_cols=78 Identities=24% Similarity=0.443 Sum_probs=73.9
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
|++.+.+||++|++.|++++++||.+.+.++|++.|+++|.||++|||+||+|+|.|.||.+||++||+|+|+|+.+|
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 345789999999999999999999999999999999999999999999999999999999999999999999998876
No 8
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.86 E-value=1.1e-21 Score=163.16 Aligned_cols=75 Identities=24% Similarity=0.420 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCC-CC
Q 020773 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQG-AS 320 (321)
Q Consensus 246 ~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~g-lr 320 (321)
.+.+||++|+++|++++++||.+.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+. .|
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 81 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKH 81 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCC
Confidence 5779999999999999999999999999999999999999999999999999999999999999999999985 55
No 9
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.86 E-value=2e-21 Score=168.07 Aligned_cols=78 Identities=28% Similarity=0.430 Sum_probs=73.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEEecC-CCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCE-ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~p~E-dnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
|+..+.+||++|+++|++++++||.+.+.+ +|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+..|
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 456789999999999999999999999865 799999999999999999999999999999999999999999998876
No 10
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.85 E-value=2.1e-21 Score=165.97 Aligned_cols=77 Identities=25% Similarity=0.422 Sum_probs=74.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+..+.+||++|+++|+++++.||++.+.++|+..|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+..|
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 78 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYH 78 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCccc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999776
No 11
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.85 E-value=1.3e-21 Score=167.91 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=73.1
Q ss_pred ChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+..+.+||++|++.|++++++||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+..|
T Consensus 3 s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (154)
T 2c2v_B 3 SAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYH 79 (154)
T ss_dssp SCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCccc
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999998776
No 12
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.85 E-value=1.9e-21 Score=176.61 Aligned_cols=79 Identities=23% Similarity=0.351 Sum_probs=75.4
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
...+.+.+||+||++.|++++|+||.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+.+|
T Consensus 19 ~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 19 FQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred cccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 5677899999999999999999999999999999999999999999999999999999999999999999999998765
No 13
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.85 E-value=2e-21 Score=170.17 Aligned_cols=78 Identities=21% Similarity=0.308 Sum_probs=73.4
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEEecC-CCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCE-ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~p~E-dnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.+..+.+||+||+++|++++++||.+.+.+ +|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+.+|
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~H 92 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWH 92 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCcc
Confidence 456789999999999999999999999865 799999999999999999999999999999999999999999999765
No 14
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.85 E-value=5.5e-22 Score=168.35 Aligned_cols=77 Identities=22% Similarity=0.327 Sum_probs=71.1
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEE--ecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVR--VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGA 319 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~--p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~gl 319 (321)
.|+. +.+||+||+++|++++|+||.+. +.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+..
T Consensus 19 ~Ms~-~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 97 (136)
T 2a7l_A 19 SMAS-MQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENI 97 (136)
T ss_dssp GGTT-SCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCC
T ss_pred hccH-HHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 3544 34999999999999999999976 78899999999999999999999999999999999999999999999986
No 15
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.85 E-value=2.1e-21 Score=165.93 Aligned_cols=78 Identities=27% Similarity=0.462 Sum_probs=74.2
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
|+..+.+||++|++.|++++++||.+.+.++|++.|+++|.||++|||+||.|+|.|.||++||++||+|+|.|+..|
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 455789999999999999999999999999999999999999999999999999999999999999999999998776
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.85 E-value=2e-21 Score=166.91 Aligned_cols=79 Identities=25% Similarity=0.284 Sum_probs=75.1
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.++..+.+||++|++.|++++++||.+.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+.+|
T Consensus 5 ~~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 83 (156)
T 2e2c_A 5 KERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWH 83 (156)
T ss_dssp CSCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred ccchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCccc
Confidence 4566789999999999999999999999999999999999999999999999999999999999999999999999876
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.85 E-value=3.4e-21 Score=167.88 Aligned_cols=77 Identities=29% Similarity=0.500 Sum_probs=73.8
Q ss_pred ChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+..+.+||++|++.|++++++||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+..|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYH 78 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcc
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999765
No 18
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.85 E-value=2.7e-21 Score=164.92 Aligned_cols=77 Identities=27% Similarity=0.459 Sum_probs=73.3
Q ss_pred ChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+..+.+||++|++.|++++++||.+.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+..|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 78 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCccc
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999998765
No 19
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.85 E-value=4e-21 Score=165.82 Aligned_cols=76 Identities=26% Similarity=0.369 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCceEEEecCC-CcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEA-RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 245 s~a~KRLqKElk~Lqkd~P~gI~V~p~Ed-nL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
..+.+||++|+++|++++++||++.+.++ |++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+..|
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFH 78 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCcc
Confidence 36889999999999999999999998765 99999999999999999999999999999999999999999999776
No 20
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.84 E-value=6.7e-21 Score=165.99 Aligned_cols=82 Identities=20% Similarity=0.311 Sum_probs=72.2
Q ss_pred CCCCCChHHHHHHHHHHHHHHhCCCCc-eEEEe-cCCC--cceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEE
Q 020773 239 GEEKPPKNWAKKIQEEWKILEKNLPDT-IFVRV-CEAR--MELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFI 314 (321)
Q Consensus 239 ~~~~~ss~a~KRLqKElk~Lqkd~P~g-I~V~p-~Edn--L~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrF 314 (321)
.+......+.+||+||+++|++++++| |.+.+ .++| ++.|+++|.||++|||+||+|+|+|.||++||++||+|+|
T Consensus 18 ~~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F 97 (160)
T 2a4d_A 18 GSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRF 97 (160)
T ss_dssp ---CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred cCCeeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEE
Confidence 333556789999999999999999998 67776 4555 8999999999999999999999999999999999999999
Q ss_pred EcCCCC
Q 020773 315 TIQGAS 320 (321)
Q Consensus 315 lT~glr 320 (321)
+|+.+|
T Consensus 98 ~T~i~H 103 (160)
T 2a4d_A 98 VTKINM 103 (160)
T ss_dssp SBCCCC
T ss_pred ecCcee
Confidence 999765
No 21
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.84 E-value=4.1e-21 Score=166.99 Aligned_cols=78 Identities=22% Similarity=0.402 Sum_probs=72.9
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEEecCC-----CcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcC
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCEA-----RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQ 317 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~p~Ed-----nL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~ 317 (321)
.+..+.+||+||+++|++++|+||++.+.++ |++.|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+
T Consensus 7 ~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~ 86 (163)
T 3rcz_B 7 HSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPP 86 (163)
T ss_dssp --CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCC
Confidence 4668999999999999999999999998876 99999999999999999999999999999999999999999998
Q ss_pred CCC
Q 020773 318 GAS 320 (321)
Q Consensus 318 glr 320 (321)
..|
T Consensus 87 i~H 89 (163)
T 3rcz_B 87 LFH 89 (163)
T ss_dssp CCS
T ss_pred Ccc
Confidence 765
No 22
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.84 E-value=3.8e-21 Score=163.90 Aligned_cols=74 Identities=28% Similarity=0.525 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEecCC-CcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 247 WAKKIQEEWKILEKNLPDTIFVRVCEA-RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 247 a~KRLqKElk~Lqkd~P~gI~V~p~Ed-nL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+.+||++|++.|++++++||++.+.++ |++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+..|
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 76 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYH 76 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCcc
Confidence 469999999999999999999999887 99999999999999999999999999999999999999999998765
No 23
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.84 E-value=8.8e-21 Score=167.30 Aligned_cols=78 Identities=24% Similarity=0.300 Sum_probs=73.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEE-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~-p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
++..+.+||++|+++|++++++||++. +.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+.+|
T Consensus 4 ~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 4 GSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 345789999999999999999999999 678899999999999999999999999999999999999999999999876
No 24
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.84 E-value=1e-20 Score=166.00 Aligned_cols=101 Identities=17% Similarity=0.223 Sum_probs=83.2
Q ss_pred ceecccCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHHhCCCCc-eEEEe-cCCC--cceEEEEEeCCCCCCCCCCEE
Q 020773 220 QFDTVDDFSDHHYNRMGFLGEEKPPKNWAKKIQEEWKILEKNLPDT-IFVRV-CEAR--MELLRAVMIGPSGTPYHDGLF 295 (321)
Q Consensus 220 qFd~V~~~sDHhf~~~~~~~~~~~ss~a~KRLqKElk~Lqkd~P~g-I~V~p-~Edn--L~~WravI~GPegTPYEGGlF 295 (321)
+-..+...++||+........+.....+.+||+||+++|++++++| |.+.+ .+++ ++.|+++|.||++|||+||+|
T Consensus 9 ~~~~~s~~~~~~~~~p~~~~~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f 88 (170)
T 2hlw_A 9 YLKSQSKLSDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIY 88 (170)
T ss_dssp CCCCSCSSSCSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCB
T ss_pred hhccccccccccccCCccccCCcccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEE
Confidence 3455667788888654322221234668899999999999999999 56776 4554 999999999999999999999
Q ss_pred EEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 296 VFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 296 ~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+|+|.||++||++||+|+|+|+.+|
T Consensus 89 ~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 89 SLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CEEEECCSSCTTSCCEEEECBCCCC
T ss_pred EEEEECCCCCCCCCCeeEEeccccc
Confidence 9999999999999999999999876
No 25
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.84 E-value=7.2e-21 Score=162.37 Aligned_cols=73 Identities=26% Similarity=0.494 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 248 AKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 248 ~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.+||++|+++|++++++||.+.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+..|
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 75 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYH 75 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCcc
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999876
No 26
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.84 E-value=6.3e-21 Score=164.20 Aligned_cols=78 Identities=22% Similarity=0.367 Sum_probs=71.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEEecC-----CCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcC
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCE-----ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQ 317 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~p~E-----dnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~ 317 (321)
|+..+.+||++|++.|++++|+||.+.+.+ +|+..|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 345789999999999999999999999875 489999999999999999999999999999999999999999998
Q ss_pred CCC
Q 020773 318 GAS 320 (321)
Q Consensus 318 glr 320 (321)
..|
T Consensus 81 i~H 83 (157)
T 2gjd_A 81 FYH 83 (157)
T ss_dssp CCC
T ss_pred Ccc
Confidence 765
No 27
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.84 E-value=8e-21 Score=168.60 Aligned_cols=76 Identities=21% Similarity=0.470 Sum_probs=70.7
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQ 317 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~ 317 (321)
..+..+.+||++|++.|++++++||.+.+.++|++.|+++|.||++|||+||+|+|+|.||.+||++||+|+|+|+
T Consensus 10 ~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~ 85 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP 85 (187)
T ss_dssp ----CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC
Confidence 4566789999999999999999999999999999999999999999999999999999999999999999999997
No 28
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.83 E-value=8.4e-21 Score=164.01 Aligned_cols=79 Identities=20% Similarity=0.311 Sum_probs=73.5
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEEecC-----CCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEc
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRVCE-----ARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITI 316 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~p~E-----dnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT 316 (321)
.|+..+.+||++|+++|++++|+||.+.+.+ +|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|+|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 4677899999999999999999999998764 68999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 020773 317 QGAS 320 (321)
Q Consensus 317 ~glr 320 (321)
+..|
T Consensus 83 ~i~H 86 (161)
T 2grr_A 83 PLFH 86 (161)
T ss_dssp CCCS
T ss_pred Cccc
Confidence 8765
No 29
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.83 E-value=1.5e-20 Score=162.82 Aligned_cols=79 Identities=13% Similarity=0.265 Sum_probs=72.3
Q ss_pred CCChHHHHHHHHHHHHHHhC-CCCceEEEecC-C--CcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcC
Q 020773 242 KPPKNWAKKIQEEWKILEKN-LPDTIFVRVCE-A--RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQ 317 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd-~P~gI~V~p~E-d--nL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~ 317 (321)
.....+.+||+||++.|+++ +++||.+.+.. + |++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~ 96 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTK 96 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcc
Confidence 56678899999999999998 78899998853 3 59999999999999999999999999999999999999999998
Q ss_pred CCC
Q 020773 318 GAS 320 (321)
Q Consensus 318 glr 320 (321)
..|
T Consensus 97 i~H 99 (156)
T 2q0v_A 97 IEM 99 (156)
T ss_dssp CCC
T ss_pred ccc
Confidence 765
No 30
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.83 E-value=6.2e-21 Score=168.60 Aligned_cols=78 Identities=21% Similarity=0.214 Sum_probs=73.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
++..+.+||++|++.|++++++||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+.+|
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 104 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYH 104 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCcc
Confidence 567789999999999999999999999999999999999999999999999999999999999999999999999876
No 31
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.83 E-value=4.8e-21 Score=164.42 Aligned_cols=75 Identities=24% Similarity=0.422 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 246 ~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.+.+||++|++.|++++++||.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+..|
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYH 79 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeeccccc
Confidence 456999999999999999999999999999999999999999999999999999999999999999999998765
No 32
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.83 E-value=1.3e-20 Score=162.34 Aligned_cols=79 Identities=25% Similarity=0.426 Sum_probs=73.9
Q ss_pred CCChHHHHHHHHHHHHHHhC---CCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCC
Q 020773 242 KPPKNWAKKIQEEWKILEKN---LPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQG 318 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd---~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~g 318 (321)
.|+..+.+||+||+++|++. ++.||.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+.
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 36778999999999999985 588999999999999999999999999999999999999999999999999999987
Q ss_pred CC
Q 020773 319 AS 320 (321)
Q Consensus 319 lr 320 (321)
.|
T Consensus 84 ~H 85 (159)
T 2bep_A 84 WH 85 (159)
T ss_dssp CB
T ss_pred Cc
Confidence 65
No 33
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.83 E-value=2e-20 Score=167.25 Aligned_cols=76 Identities=28% Similarity=0.461 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 245 s~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
..+.+||++|++.|++++|+||.+.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+.+|
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 122 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYH 122 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCcc
Confidence 5688999999999999999999999999999999999999999999999999999999999999999999999876
No 34
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.82 E-value=3.7e-20 Score=156.40 Aligned_cols=76 Identities=18% Similarity=0.297 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHHHHHhC-CCCceEEEecC-C--CcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 245 KNWAKKIQEEWKILEKN-LPDTIFVRVCE-A--RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 245 s~a~KRLqKElk~Lqkd-~P~gI~V~p~E-d--nL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
..+.+||+||+++|+++ +++||.+.+.. + |++.|+++|.||++|||+||.|+|+|.||++||++||+|+|+|+..|
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 84 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINL 84 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEccccc
Confidence 35679999999999998 78899998853 3 49999999999999999999999999999999999999999998765
No 35
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.82 E-value=2e-20 Score=166.75 Aligned_cols=78 Identities=26% Similarity=0.433 Sum_probs=71.8
Q ss_pred CChHHHHHHHHHHHHHHhC---CCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCC
Q 020773 243 PPKNWAKKIQEEWKILEKN---LPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGA 319 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd---~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~gl 319 (321)
|+..+.+||+||+++|+++ ++.||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+.+
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 4567899999999999987 4789999999999999999999999999999999999999999999999999999876
Q ss_pred C
Q 020773 320 S 320 (321)
Q Consensus 320 r 320 (321)
|
T Consensus 82 H 82 (201)
T 3k9o_A 82 H 82 (201)
T ss_dssp B
T ss_pred c
Confidence 5
No 36
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.82 E-value=2.3e-20 Score=166.81 Aligned_cols=77 Identities=22% Similarity=0.453 Sum_probs=68.9
Q ss_pred ChHHHHHHHHHHHHHHhCCC-------------CceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCC
Q 020773 244 PKNWAKKIQEEWKILEKNLP-------------DTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPP 310 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P-------------~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPP 310 (321)
...+.+||+||++.|+++++ .||.+.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||
T Consensus 30 ~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP 109 (193)
T 2f4z_A 30 TPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPP 109 (193)
T ss_dssp --CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCC
Confidence 34678999999999999987 79999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCC
Q 020773 311 VVFITIQGAS 320 (321)
Q Consensus 311 kVrFlT~glr 320 (321)
+|+|+|+.+|
T Consensus 110 ~V~F~T~i~H 119 (193)
T 2f4z_A 110 KMKFVTKIWH 119 (193)
T ss_dssp EEEESSCCCB
T ss_pred eEEEecCCcc
Confidence 9999997654
No 37
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.81 E-value=1.2e-19 Score=158.73 Aligned_cols=79 Identities=25% Similarity=0.362 Sum_probs=69.4
Q ss_pred CCChHHHHHHHHHHHHHHh-C-C------CC---ceEEEe-cCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEK-N-L------PD---TIFVRV-CEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEP 309 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqk-d-~------P~---gI~V~p-~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sP 309 (321)
.|+..+.+||++|++.|++ . + |. ++.+.+ .++|++.|+++|.||++|||+||+|+|+|.||++||++|
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 3778899999999999998 4 3 43 467777 788999999999999999999999999999999999999
Q ss_pred CeEEEEc-CCCC
Q 020773 310 PVVFITI-QGAS 320 (321)
Q Consensus 310 PkVrFlT-~glr 320 (321)
|+|+|+| +..|
T Consensus 82 P~v~f~t~~i~H 93 (172)
T 2y9m_A 82 PKISFMQNNILH 93 (172)
T ss_dssp CEEEECTTSCCC
T ss_pred CEEEEeeCCeec
Confidence 9999999 6554
No 38
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.80 E-value=8.1e-20 Score=156.56 Aligned_cols=74 Identities=26% Similarity=0.437 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHhCCCCceEE-EecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 246 NWAKKIQEEWKILEKNLPDTIFV-RVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 246 ~a~KRLqKElk~Lqkd~P~gI~V-~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.+.+||++|++.|++++++||.+ .+.++|++.|+++|. |++|||+||+|+|.|.||++||++||+|+|.|+..|
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCcc
Confidence 46799999999999999999999 788999999999999 999999999999999999999999999999998775
No 39
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.80 E-value=1.3e-19 Score=157.07 Aligned_cols=78 Identities=24% Similarity=0.282 Sum_probs=72.7
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEEe-cCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVRV-CEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~p-~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
...+.+.+||++|++.|++++|+||++.+ .++++..|.++| ||.+|||+||+|+|+|.||++||++||+|+|+|+..|
T Consensus 10 ~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 88 (167)
T 3fn1_B 10 RRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWH 88 (167)
T ss_dssp CCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCC
T ss_pred cchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCccc
Confidence 56678999999999999999999999985 467899999988 9999999999999999999999999999999998776
No 40
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.80 E-value=1.7e-19 Score=167.33 Aligned_cols=79 Identities=25% Similarity=0.430 Sum_probs=74.6
Q ss_pred CCChHHHHHHHHHHHHHHhC---CCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCC
Q 020773 242 KPPKNWAKKIQEEWKILEKN---LPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQG 318 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd---~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~g 318 (321)
.|+..+.+||+||+++|+++ ++.||++.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+.
T Consensus 53 ~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 132 (253)
T 3e46_A 53 DMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 132 (253)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCC
Confidence 57889999999999999987 478999999999999999999999999999999999999999999999999999987
Q ss_pred CC
Q 020773 319 AS 320 (321)
Q Consensus 319 lr 320 (321)
+|
T Consensus 133 ~H 134 (253)
T 3e46_A 133 WH 134 (253)
T ss_dssp CB
T ss_pred cc
Confidence 65
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.79 E-value=6.9e-20 Score=159.13 Aligned_cols=79 Identities=20% Similarity=0.292 Sum_probs=74.0
Q ss_pred CCChHHHHHHHHHHHHHHhCC------------CCceEEEecCCCcceEEEEEeCCCCCCCC--CCEEEEEEECCCCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNL------------PDTIFVRVCEARMELLRAVMIGPSGTPYH--DGLFVFDCIFPPSYPN 307 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~------------P~gI~V~p~EdnL~~WravI~GPegTPYE--GGlF~fdI~FP~dYP~ 307 (321)
.|+..+.+||++|++.|++++ +.+|.+.+.++|++.|+++|.||++|||+ ||.|+|.|.||++||+
T Consensus 4 ~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 4 SMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred cccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 466678899999999999987 78999999999999999999999999999 9999999999999999
Q ss_pred CCCeEEEEcCCCC
Q 020773 308 EPPVVFITIQGAS 320 (321)
Q Consensus 308 sPPkVrFlT~glr 320 (321)
+||+|+|+|+.+|
T Consensus 84 ~pP~v~f~t~i~H 96 (167)
T 4ds2_A 84 EPPTVRFVTPVYS 96 (167)
T ss_dssp SCCEEEESSCCCC
T ss_pred CCCEEEEeCCccc
Confidence 9999999999876
No 42
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.78 E-value=3.6e-19 Score=154.02 Aligned_cols=74 Identities=26% Similarity=0.346 Sum_probs=68.9
Q ss_pred ChHHHHHHHHHHHHHHhCCCCceEEE-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 244 PKNWAKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P~gI~V~-p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.+.+.+||++|+++| ++++||.+. +.++|+..|+++| ||++|||+||.|+|.|.||++||++||+|+|.|+..|
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYH 78 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCcc
Confidence 357899999999999 578999998 7889999999988 9999999999999999999999999999999999876
No 43
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.78 E-value=2.9e-19 Score=158.16 Aligned_cols=75 Identities=17% Similarity=0.287 Sum_probs=65.6
Q ss_pred CCCh--HHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCC
Q 020773 242 KPPK--NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGA 319 (321)
Q Consensus 242 ~~ss--~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~gl 319 (321)
.|+. .+.+||+||++.|++ +||.+.+. ++++.|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+.+
T Consensus 19 ~ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~ 94 (179)
T 2z5d_A 19 SMSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIF 94 (179)
T ss_dssp ----CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred cCCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCc
Confidence 4443 589999999999985 57888886 57999999999999999999999999999999999999999999766
Q ss_pred C
Q 020773 320 S 320 (321)
Q Consensus 320 r 320 (321)
|
T Consensus 95 H 95 (179)
T 2z5d_A 95 H 95 (179)
T ss_dssp B
T ss_pred c
Confidence 5
No 44
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.77 E-value=8.5e-20 Score=165.67 Aligned_cols=75 Identities=28% Similarity=0.522 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEecCC-CcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 246 NWAKKIQEEWKILEKNLPDTIFVRVCEA-RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 246 ~a~KRLqKElk~Lqkd~P~gI~V~p~Ed-nL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.+.+||++|++.|++++++||++.+.++ ++..|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+.+|
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 77 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYH 77 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCcc
Confidence 4679999999999999999999998776 56799999999999999999999999999999999999999998776
No 45
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.77 E-value=2.1e-19 Score=154.32 Aligned_cols=71 Identities=17% Similarity=0.286 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 247 WAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 247 a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+.+||+||++.|++. ||.+.+.++|+..|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+..|
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 73 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLH 73 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCcc
Confidence 358999999999874 78899999999999999999999999999999999999999999999999998765
No 46
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.77 E-value=5.1e-19 Score=156.16 Aligned_cols=76 Identities=26% Similarity=0.348 Sum_probs=70.4
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEE-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~-p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
..++.+.+||++|+++| ++|+||.+. +.++|++.|+++| ||++|||+||+|+|.|.||++||++||+|+|.|+..|
T Consensus 22 ~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 98 (180)
T 2nvu_C 22 KKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYH 98 (180)
T ss_dssp CSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred CCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCcc
Confidence 45667899999999999 678999998 7889999999988 9999999999999999999999999999999998765
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.77 E-value=8.6e-19 Score=170.58 Aligned_cols=76 Identities=28% Similarity=0.465 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 245 s~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+.+.+||+||++.|++++|+||++.+.++|++.|+++|.||++|||+||.|+|.|.||++||++||+|+|.|+..|
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 77 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 77 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999876
No 48
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.76 E-value=3.4e-19 Score=152.54 Aligned_cols=73 Identities=22% Similarity=0.396 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHhCCCCceEEE-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 247 WAKKIQEEWKILEKNLPDTIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 247 a~KRLqKElk~Lqkd~P~gI~V~-p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+.+||++|++.|++++++||.+. +.++|++.|+++|. |++|||+||+|+|+|.||++||++||+|+|+|+.+|
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 76 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYH 76 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcc
Confidence 56899999999999999999865 56789999999998 999999999999999999999999999999999876
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.76 E-value=5.5e-19 Score=156.84 Aligned_cols=79 Identities=13% Similarity=0.240 Sum_probs=73.8
Q ss_pred CCChHHHHHHHHHHHHHHhCC---CCceEEEecCCCcceEEEEEeCC-CCCCCCC-----------CEEEEEEECCCCCC
Q 020773 242 KPPKNWAKKIQEEWKILEKNL---PDTIFVRVCEARMELLRAVMIGP-SGTPYHD-----------GLFVFDCIFPPSYP 306 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~---P~gI~V~p~EdnL~~WravI~GP-egTPYEG-----------GlF~fdI~FP~dYP 306 (321)
.++..+.+||++|+++|++++ +.+|.+.+.++|++.|+++|.|| ++|||+| |.|+|.|.||++||
T Consensus 23 ~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 23 SGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp -CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 678889999999999999988 68899999999999999999998 9999998 89999999999999
Q ss_pred CCCCeEEEEcCCCC
Q 020773 307 NEPPVVFITIQGAS 320 (321)
Q Consensus 307 ~sPPkVrFlT~glr 320 (321)
++||+|+|.|+.+|
T Consensus 103 ~~PP~V~f~tpi~h 116 (186)
T 1zuo_A 103 FDPPFVRVVLPVLS 116 (186)
T ss_dssp SSCCEEEEEESCEE
T ss_pred CCCCeEEEeCCccC
Confidence 99999999998764
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.72 E-value=6.8e-18 Score=147.91 Aligned_cols=71 Identities=18% Similarity=0.357 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 246 ~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
.+.+||++|++.|++++. ++ ..++|+..|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+..|
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 82 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILH 82 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCccc
Confidence 567999999999999874 44 347899999999999999999999999999999999999999999998765
No 51
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.71 E-value=1.2e-17 Score=148.48 Aligned_cols=76 Identities=22% Similarity=0.290 Sum_probs=70.1
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCceEEE----ecCCCcc---eEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEE
Q 020773 242 KPPKNWAKKIQEEWKILEKNLPDTIFVR----VCEARME---LLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFI 314 (321)
Q Consensus 242 ~~ss~a~KRLqKElk~Lqkd~P~gI~V~----p~EdnL~---~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrF 314 (321)
...+.+.+||++|+++|+ +|+||++. +.++|++ .|+++|. |++|||+||.|+|.|.||++||++||+|+|
T Consensus 25 ~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 25 PNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred CCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 456688999999999998 78899998 7889999 9999997 788999999999999999999999999999
Q ss_pred EcCCCC
Q 020773 315 TIQGAS 320 (321)
Q Consensus 315 lT~glr 320 (321)
+|+.+|
T Consensus 102 ~t~i~H 107 (190)
T 3o2u_A 102 LKKIFH 107 (190)
T ss_dssp CSCCCC
T ss_pred ecCccc
Confidence 999876
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.46 E-value=8.7e-15 Score=129.56 Aligned_cols=69 Identities=17% Similarity=0.328 Sum_probs=63.2
Q ss_pred CChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCC----------EEEEEEECCCCCCCCCCeE
Q 020773 243 PPKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDG----------LFVFDCIFPPSYPNEPPVV 312 (321)
Q Consensus 243 ~ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGG----------lF~fdI~FP~dYP~sPPkV 312 (321)
-...|.+||++|++.|++ ++.+..+++..|.++|.||+||||+|| .|.|.|.||.+||++||+|
T Consensus 29 ~~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV 102 (172)
T 2z6o_A 29 DRELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEI 102 (172)
T ss_dssp CTHHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred ccHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCee
Confidence 457889999999999998 356677899999999999999999999 9999999999999999999
Q ss_pred EEEcC
Q 020773 313 FITIQ 317 (321)
Q Consensus 313 rFlT~ 317 (321)
+|.+.
T Consensus 103 ~F~~~ 107 (172)
T 2z6o_A 103 AVPEL 107 (172)
T ss_dssp BCGGG
T ss_pred eeCCC
Confidence 99775
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=98.65 E-value=5.1e-09 Score=91.89 Aligned_cols=68 Identities=22% Similarity=0.384 Sum_probs=57.1
Q ss_pred ChHHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCC----------EEEEEEECCCCCCCCCCeEE
Q 020773 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDG----------LFVFDCIFPPSYPNEPPVVF 313 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGG----------lF~fdI~FP~dYP~sPPkVr 313 (321)
...|..||..|++.|-+- |.....+=..|.+++.||+||+|.|+ .|.+.|.||.+||..||.|+
T Consensus 32 ~~~w~~RlkeEy~alI~y------v~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~ 105 (168)
T 3kpa_A 32 GDKWTARLKEEYASLITY------VEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIA 105 (168)
T ss_dssp THHHHHHHHHHHHHHHHH------HHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHHHHHH------HHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEee
Confidence 456999999999998542 22223344579999999999999999 99999999999999999999
Q ss_pred EEcC
Q 020773 314 ITIQ 317 (321)
Q Consensus 314 FlT~ 317 (321)
|.+.
T Consensus 106 Fp~l 109 (168)
T 3kpa_A 106 LPEL 109 (168)
T ss_dssp CGGG
T ss_pred cccc
Confidence 9884
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=97.86 E-value=2.7e-05 Score=68.14 Aligned_cols=68 Identities=18% Similarity=0.168 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhCCC---CceEEEecCCCcceEEEEEeCCCCCCCCCCE---EEEEEECCCCCCCCCCeEEEEc
Q 020773 249 KKIQEEWKILEKNLP---DTIFVRVCEARMELLRAVMIGPSGTPYHDGL---FVFDCIFPPSYPNEPPVVFITI 316 (321)
Q Consensus 249 KRLqKElk~Lqkd~P---~gI~V~p~EdnL~~WravI~GPegTPYEGGl---F~fdI~FP~dYP~sPPkVrFlT 316 (321)
+|..+|+..+.+.-| +...+...++....+-+.+.|+-.++|+||. |.+.|.||.+||++||.|.|.+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p 104 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINL 104 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECG
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEEC
Confidence 566777777755332 2233345566666777788888889999999 8899999999999999997754
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=96.87 E-value=0.0011 Score=57.08 Aligned_cols=61 Identities=13% Similarity=0.170 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCCceEEE--ec---CCCcceEEEEEeCCCCCCCCCCEEEE--EEECCCCCCCCCCeEEEEcC
Q 020773 251 IQEEWKILEKNLPDTIFVR--VC---EARMELLRAVMIGPSGTPYHDGLFVF--DCIFPPSYPNEPPVVFITIQ 317 (321)
Q Consensus 251 LqKElk~Lqkd~P~gI~V~--p~---EdnL~~WravI~GPegTPYEGGlF~f--dI~FP~dYP~sPPkVrFlT~ 317 (321)
..+|+..+...-| ++..+ .. ..+|..|.++|. .+|+|+.|.+ .|.||.+||++||.| |.++
T Consensus 25 t~~dv~~vl~~yp-~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~p 92 (146)
T 3obq_A 25 TVRETVNVITLYK-DLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKP 92 (146)
T ss_dssp HHHHHHHHHHHCT-TEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECC
T ss_pred hHHHHHHHHHhCC-CCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeC
Confidence 3456666654433 33222 22 257889999998 7899999995 999999999999999 6654
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.37 E-value=0.029 Score=45.33 Aligned_cols=73 Identities=16% Similarity=0.273 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEc-CCCC
Q 020773 246 NWAKKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITI-QGAS 320 (321)
Q Consensus 246 ~a~KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT-~glr 320 (321)
....+...|+..|+.--+..+.+. ......+++.|..-.+..-+.-.+.|.|.||++||..||.+.+.+ .+|+
T Consensus 10 ~~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~~~l~ 83 (128)
T 2ebm_A 10 DYGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQENLE 83 (128)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEEESSCC
T ss_pred ChHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEcCCCCC
Confidence 456778899999997666655442 222345555555222222233478999999999999999999887 4654
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.73 E-value=0.27 Score=40.14 Aligned_cols=74 Identities=9% Similarity=0.116 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCceEEEecCC-------CcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEc-
Q 020773 245 KNWAKKIQEEWKILEKNLPDTIFVRVCEA-------RMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITI- 316 (321)
Q Consensus 245 s~a~KRLqKElk~Lqkd~P~gI~V~p~Ed-------nL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT- 316 (321)
.....+...|+..|+.--+..+.+ .... ....+++.|.+..+ .-..-.+.|.|.||++||..||.|.+.+
T Consensus 9 ~~~~e~q~~EleaL~SIY~d~~~~-~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 9 DQYYEIQCNELEAIRSIYMDDFTD-LTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSEEC-CSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred cchHHHHHHHHHHHHHHChhhhee-cccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 345566788999998765555432 2221 23456666764332 1123478899999999999999999875
Q ss_pred CCCC
Q 020773 317 QGAS 320 (321)
Q Consensus 317 ~glr 320 (321)
.+|+
T Consensus 87 ~~L~ 90 (138)
T 2yz0_A 87 QNVM 90 (138)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 3554
No 58
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.52 E-value=0.22 Score=40.51 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=47.7
Q ss_pred ChHHHHHHHHHHHHHHhCCCCceEEEecCC-----CcceEEEEEeCCCC-C-CCCCCEEEEEEECCCCCCCCCCeEEE-E
Q 020773 244 PKNWAKKIQEEWKILEKNLPDTIFVRVCEA-----RMELLRAVMIGPSG-T-PYHDGLFVFDCIFPPSYPNEPPVVFI-T 315 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P~gI~V~p~Ed-----nL~~WravI~GPeg-T-PYEGGlF~fdI~FP~dYP~sPPkVrF-l 315 (321)
......+...|+..|+.--+..+.+.-... ....+++.|. |.+ . .-..-.+.|.|.||.+||..||.|.+ .
T Consensus 8 ~~~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 8 MESYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred CcchHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 345667788999999876665554422111 1234455554 322 1 00124689999999999999999988 4
Q ss_pred cCCCC
Q 020773 316 IQGAS 320 (321)
Q Consensus 316 T~glr 320 (321)
+.+|.
T Consensus 87 ~~~L~ 91 (137)
T 1ukx_A 87 AKGLS 91 (137)
T ss_dssp EESSS
T ss_pred CCCCC
Confidence 44553
No 59
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.35 E-value=0.23 Score=39.96 Aligned_cols=69 Identities=17% Similarity=0.139 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhCCCCceEEEecCC--CcceEEEEEeCCCCCCC--CCCEEEEEEECCCCCCCCCCeEEEEcC
Q 020773 249 KKIQEEWKILEKNLPDTIFVRVCEA--RMELLRAVMIGPSGTPY--HDGLFVFDCIFPPSYPNEPPVVFITIQ 317 (321)
Q Consensus 249 KRLqKElk~Lqkd~P~gI~V~p~Ed--nL~~WravI~GPegTPY--EGGlF~fdI~FP~dYP~sPPkVrFlT~ 317 (321)
.++..|+..|+.--+..+.+.-... ....+++.|..+.+..- ..-.+.|.|.||++||..||.|...+.
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4678999999986666665542221 23344555543322111 124788999999999999999988764
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.23 E-value=0.18 Score=40.79 Aligned_cols=70 Identities=19% Similarity=0.117 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhCCCC--ceEEE-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEEEcCCCC
Q 020773 250 KIQEEWKILEKNLPD--TIFVR-VCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFITIQGAS 320 (321)
Q Consensus 250 RLqKElk~Lqkd~P~--gI~V~-p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrFlT~glr 320 (321)
+...|+..|+.--+. .+.+. -...+...+++.|...... =..-.+.|.|.||.+||..||.|...+.+|.
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~~~L~ 83 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINSEQLT 83 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCCSSSC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEhhhCC
Confidence 467889888865442 34321 1112234666666532210 0123789999999999999999988877764
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.89 E-value=0.71 Score=38.99 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=45.0
Q ss_pred ChHHHHHHHHHHHHHHhCCC--CceEEEecC-------------CC-c--ceEEEEEeCCCCCCCCCCEEEEEEECCCCC
Q 020773 244 PKNWAKKIQEEWKILEKNLP--DTIFVRVCE-------------AR-M--ELLRAVMIGPSGTPYHDGLFVFDCIFPPSY 305 (321)
Q Consensus 244 ss~a~KRLqKElk~Lqkd~P--~gI~V~p~E-------------dn-L--~~WravI~GPegTPYEGGlF~fdI~FP~dY 305 (321)
......+-..|+..|+.--| .-+.+.-.. .+ . ..+++.|.-. + + ...+.+.|.||.+|
T Consensus 12 ~~~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~~-~-~--~~~i~L~v~lP~~Y 87 (154)
T 2daw_A 12 VKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIE-E-P--KVKIDLQVTMPHSY 87 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEET-T-T--TEEEEEEEEECSST
T ss_pred hhhhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEecC-C-C--CceEEEEEEcCCCC
Confidence 34556667788988887655 445442100 01 1 2344333221 1 1 13799999999999
Q ss_pred CCCCCeEEEEcCCC
Q 020773 306 PNEPPVVFITIQGA 319 (321)
Q Consensus 306 P~sPPkVrFlT~gl 319 (321)
|..||.|...+.++
T Consensus 88 P~~~P~i~l~~~~l 101 (154)
T 2daw_A 88 PYLALQLFGRSSEL 101 (154)
T ss_dssp TSSCCEEEEECSSS
T ss_pred CCCCCcEEEEeCCC
Confidence 99999999888765
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=87.21 E-value=1.8 Score=36.03 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHHhCCC--CceEEEecCC--------------C-c---ceEEEEE--eCCCCCCCCCCEEEEEEECC
Q 020773 245 KNWAKKIQEEWKILEKNLP--DTIFVRVCEA--------------R-M---ELLRAVM--IGPSGTPYHDGLFVFDCIFP 302 (321)
Q Consensus 245 s~a~KRLqKElk~Lqkd~P--~gI~V~p~Ed--------------n-L---~~WravI--~GPegTPYEGGlF~fdI~FP 302 (321)
.....+-..|+..|+.--+ .-+.+. ... . . ..+++.| .++.+ ..-.+.|.|.+|
T Consensus 7 ~~~~e~Q~~EleaL~SIY~~~de~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~f~I~l~~~~~~~---~~~~l~L~v~lP 82 (152)
T 2dax_A 7 GEQAEAQLAELDLLASMFPGENELIVN-DQLAVAELKDCIEKKTMEGRSSKVYFTINMNLDVSDE---KMAMFSLACILP 82 (152)
T ss_dssp CHHHHHHHHHHHHHHHHCCSSSSEEES-CHHHHHHHHHHHHHTCCCCCCSCEEEEEEEEEECSTT---CEEEEEEEEEEC
T ss_pred cchHHHHHHHHHHHHHhCCCCCeEEEc-CchhHHHHHHHhhcccccCCCCceEEEEEEecCCCCc---cCceEEEEEECC
Confidence 3455666788888887655 445431 110 0 0 1333333 33321 123588999999
Q ss_pred CCCCCCCCeEEEEcCCC
Q 020773 303 PSYPNEPPVVFITIQGA 319 (321)
Q Consensus 303 ~dYP~sPPkVrFlT~gl 319 (321)
.+||..||.|...+..+
T Consensus 83 ~~YP~~~P~i~l~~~~l 99 (152)
T 2dax_A 83 FKYPAVLPEITVRSVLL 99 (152)
T ss_dssp SSTTSSCCCCEEECTTS
T ss_pred CCCCCCCCeEEEEcccC
Confidence 99999999999887543
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=58.33 E-value=26 Score=31.16 Aligned_cols=56 Identities=16% Similarity=0.223 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhCCCCceEEEecCCCcceEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCeEEE
Q 020773 249 KKIQEEWKILEKNLPDTIFVRVCEARMELLRAVMIGPSGTPYHDGLFVFDCIFPPSYPNEPPVVFI 314 (321)
Q Consensus 249 KRLqKElk~Lqkd~P~gI~V~p~EdnL~~WravI~GPegTPYEGGlF~fdI~FP~dYP~sPPkVrF 314 (321)
.+|.+|+..|-=+. +.-....+...++.+..-. |....+.|.++..||.+||.+..
T Consensus 4 ~~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~ 59 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFV 59 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEEC
T ss_pred HHHHHHHHHhCCce-----eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEE
Confidence 46788888874321 1222456888888888554 47899999999999999998754
No 64
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=28.95 E-value=45 Score=29.76 Aligned_cols=26 Identities=27% Similarity=0.607 Sum_probs=23.1
Q ss_pred CCCEEEEEEECCCCCCC-----CCCeEEEEc
Q 020773 291 HDGLFVFDCIFPPSYPN-----EPPVVFITI 316 (321)
Q Consensus 291 EGGlF~fdI~FP~dYP~-----sPPkVrFlT 316 (321)
+.|.|.|.-.+|--||. .||.|+|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 36999999999999998 899999964
No 65
>2js3_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural G PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris}
Probab=22.74 E-value=17 Score=28.83 Aligned_cols=12 Identities=42% Similarity=0.780 Sum_probs=9.4
Q ss_pred cccccCcccccc
Q 020773 139 VEASLPWLKDIA 150 (321)
Q Consensus 139 vea~~pwl~~~~ 150 (321)
-.|+|||||.-.
T Consensus 59 C~ASVpWl~tGD 70 (96)
T 2js3_A 59 CGASVPWLQTGD 70 (96)
T ss_dssp SSCEEETTCCCS
T ss_pred cCccchhhhcCc
Confidence 469999999753
Done!