Query 020781
Match_columns 321
No_of_seqs 107 out of 264
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 08:05:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020781.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020781hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qd1_A Formiminotransferase-cy 100.0 7E-110 2E-114 795.9 25.5 273 19-313 1-287 (325)
2 1tt9_A Formimidoyltransferase- 100.0 9E-105 3E-109 803.9 29.8 268 18-307 1-278 (541)
3 2x4k_A 4-oxalocrotonate tautom 51.3 13 0.00045 25.1 3.3 33 117-149 2-37 (63)
4 1nu0_A Hypothetical protein YQ 37.2 19 0.00066 30.0 2.7 40 117-156 57-97 (138)
5 1b4u_B LIGA, LIGB, protocatech 32.9 46 0.0016 30.8 4.8 68 227-296 98-190 (302)
6 4ici_A Putative flavoprotein; 31.6 33 0.0011 28.7 3.3 51 6-62 1-52 (171)
7 2z5b_A Protein YPL144W, DMP1; 29.3 33 0.0011 29.6 2.9 54 103-157 69-122 (151)
8 2lfh_A DNA-binding protein inh 23.2 22 0.00076 26.8 0.6 44 3-46 11-61 (68)
9 2bbe_A Hypothetical protein SO 22.8 94 0.0032 23.4 4.2 57 12-70 7-66 (108)
10 2os5_A Acemif; macrophage migr 22.6 2.4E+02 0.0081 21.7 6.7 66 84-149 18-91 (119)
11 2pd1_A Hypothetical protein; u 22.1 1.5E+02 0.005 21.9 5.1 49 20-71 6-57 (104)
12 3kp1_A D-ornithine aminomutase 21.2 1.1E+02 0.0038 32.4 5.5 70 215-291 477-546 (763)
13 2cc6_A VNG1446H, dodecin; flav 20.9 1E+02 0.0036 23.0 3.9 28 65-101 5-32 (68)
No 1
>1qd1_A Formiminotransferase-cyclodeaminase; functional dimer, alpha-beta-BETA-alpha sandwich, electrosta charged substrate tunnel; HET: FON; 1.70A {Sus scrofa} SCOP: d.58.34.1 d.58.34.1
Probab=100.00 E-value=6.5e-110 Score=795.90 Aligned_cols=273 Identities=27% Similarity=0.406 Sum_probs=258.9
Q ss_pred ccceeeeccccccCCHHHHHHHHHHHhhCCCeEEEeecCCCCCCcceEEEeeccccCCCCCcccchHHHHHHHHHHHHHH
Q 020781 19 SILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYG 98 (321)
Q Consensus 19 ~~lveCvpN~SEGR~~~vie~I~~a~~~~~gv~LLd~~~D~dyNRtv~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~e 98 (321)
+||+|||||||||||+++||+|++++++++||+|||+|+|+|||||||||+|+ |+ +|.+|+++++++|++
T Consensus 1 ~klveCvpNfSEGR~~~vIe~I~~a~~~~~gv~LLd~~~D~~~NRsv~T~vg~---pe-------~v~eaa~~~~~~A~e 70 (325)
T 1qd1_A 1 SQLVECVPNFSEGKNQEVIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGR---PE-------DVVEGALNAARAAYQ 70 (325)
T ss_dssp CCEEEECCEESCSSCHHHHHHHHHHHHTSTTCEEEEEEEETTTTEEEEEEEEC---HH-------HHHHHHHHHHHHHHH
T ss_pred CceEEEeeeecccCCHHHHHHHHHHHhcCCCcEEEeCCCCCCCCCceEEEccC---hH-------HHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999995 55 899999999999999
Q ss_pred hcCCCCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHhhhcCccCCC
Q 020781 99 AINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRELGYYRPN 176 (321)
Q Consensus 99 lIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A--~p~rr~La~iRr~~G~f~~~ 176 (321)
+|||++|+|+|||||||||||||||+++|||||+++|+++|++||++|+|||||||+| +|+|++|++||| ||||++
T Consensus 71 lIDm~~H~G~HPRmGavDviPf~Pl~~~tmeec~~lA~~~g~~i~~~l~VPVyLYg~Aa~~p~rr~L~~iRr--G~yegl 148 (325)
T 1qd1_A 71 LIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAFGQRLAEELGVPVYLYGEAARTAGRQSLPALRA--GEYEAL 148 (325)
T ss_dssp HCCGGGCCCSSCCSBSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHTCCEEEEETTCSSGGGSCHHHHHT--THHHHH
T ss_pred hccccccCCCCCCCCccceeeeeeCCCCCHHHHHHHHHHHHHHHhhhcCCcEEeehhhcCCCccCcHHHhcc--cccccc
Confidence 9999999999999999999999999999999999999999999999999999999988 899999999999 966554
Q ss_pred CCCCcccCCCCC-CCCCCCCCCCCCCCCCCCCeeeecCCCCeEEeeeeecCCCHHHHHHHHHHhccCC------CCCCCc
Q 020781 177 SMGNQWAGWTMP-EILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTV 249 (321)
Q Consensus 177 ~~~~~~~g~~~~-~~~~~~PD~GP~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~Ar~IA~~vR~~g------GGL~~V 249 (321)
. ++ ++++|+|||||+++||++|+|+||||+||||||||| |+|+++||+||++||++| |||++|
T Consensus 149 ~---------e~~~~~~~~PD~Gp~~~~p~~Gat~vGAr~~liayNVnL-t~~~~~A~~IA~~vR~~gr~~~~pGGL~~V 218 (325)
T 1qd1_A 149 P---------EKLKQAEWAPDFGPSAFVPSWGATVAGARKFLLAFNINL-LSTREQAHRIALDLREQGRGKDQPGRLKKV 218 (325)
T ss_dssp H---------HHTTSGGGCCSBSCCCCCTTTBCEEEEECSCCEEEEEEE-SSCHHHHHHHHHHHSTTC------CCSTTE
T ss_pred h---------hhccCCCCCCCCCCCCCCCCcceEEEecCCceeeEeeec-cCcHHHHHHHHHHhhhcCCCCCCCCCccce
Confidence 3 33 678999999999999999999999999999999999 777999999999999999 999999
Q ss_pred eEeeeeeC-CCcEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCceeeeeccCCChHHHH----HHHHHH
Q 020781 250 QTLGLVHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIV----EKYMNL 313 (321)
Q Consensus 250 qAmgl~~~-~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~~Gv~V~~~y~~~f~~~~il----e~~l~~ 313 (321)
|||||+|+ +|++||||||+||++||+|+||++|+++|++|||.|+++|++||+|.+.| |+||++
T Consensus 219 qAmg~~~~e~~~~qVS~Nl~d~~~t~~~~V~e~V~~~A~~~Gv~V~gse~vGl~P~~al~~~a~yyl~~ 287 (325)
T 1qd1_A 219 QAIGWYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQELSLPVVGSQLVGLVPLKALLDAAAFYCEK 287 (325)
T ss_dssp EEEEEEETTTTEEEEEEEESCTTTSCHHHHHHHHHHHHHHTTCCEEEEEEESCBCHHHHHHHHHHHHHH
T ss_pred EEeeEEecCCCeEEEEecccCCccCCHHHHHHHHHHHHHHcCCceeceEEeCcchHHHHHHHHHHHHhc
Confidence 99999997 89999999999999999999999999999999999999999999999763 455543
No 2
>1tt9_A Formimidoyltransferase-cyclodeaminase (formiminotransferase- cyclodeaminase) (FTCD)...; hepatitis autoantigen, intermediate channeling; 3.42A {Rattus norvegicus} PDB: 2pfd_A
Probab=100.00 E-value=9.4e-105 Score=803.94 Aligned_cols=268 Identities=28% Similarity=0.401 Sum_probs=257.8
Q ss_pred cccceeeeccccccCCHHHHHHHHHHHhhCCCeEEEeecCCCCCCcceEEEeeccccCCCCCcccchHHHHHHHHHHHHH
Q 020781 18 QSILVCCKLFISESRNLAALDAIERAARLDTETVIVNKFEDRIYNRARYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAY 97 (321)
Q Consensus 18 ~~~lveCvpN~SEGR~~~vie~I~~a~~~~~gv~LLd~~~D~dyNRtv~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~ 97 (321)
|++|+|||||||||||+++||+|++++++++||+|||+|+|+|||||||||+|+ |+ +|.+|+|+++++|+
T Consensus 1 m~~lvecvpn~SEgR~~~~i~~I~~a~~~~~gv~lld~~~d~~~NRtv~T~vg~---p~-------~v~~a~~~~~~~A~ 70 (541)
T 1tt9_A 1 MSQLVECVPNFSEGNNQEVIDAISQAISQTPGCVLLDVDAGPSTNRTVYTFVGQ---PE-------CVVEGALSAARTAS 70 (541)
T ss_pred CCceEEEeeeecccCCHHHHHHHHHHHhcCCCcEEEeCCCCCCCCCCeeEEcCC---cH-------HHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999999999995 66 99999999999999
Q ss_pred HhcCCCCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHhhhcCccCC
Q 020781 98 GAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRELGYYRP 175 (321)
Q Consensus 98 elIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A--~p~rr~La~iRr~~G~f~~ 175 (321)
++|||++|+|+|||||||||||||||+++||+||+++|+++|++||++|+|||||||+| +|+|++|++||| ||||+
T Consensus 71 ~~IDm~~H~G~HPR~GavDvipf~Pl~~~t~eec~~~A~~~~~~i~~~l~vPvylYg~Aa~~p~r~~L~~iRr--G~ye~ 148 (541)
T 1tt9_A 71 QLIDMRKHKGEHPRMGALDVCPFIPVRGVSMDECVLCAKAFGQRLAEELNVPVYLYGEAAQMPSRQTLPAIRA--GEYEA 148 (541)
T ss_pred HhcCccccCCCCCCCCCcCccccccCCCCCHHHHHHHHHHHHHHHhhhcCCcEEeeHhhcCCCCcCcHHHhhc--ccccc
Confidence 99999999999999999999999999999999999999999999999999999999988 999999999999 96655
Q ss_pred CCCCCcccCCCCC-CCCCCCCCCCCCCCCCCCCeeeecCCCCeEEeeeeecCCCHHHHHHHHHHhccCC------CCCCC
Q 020781 176 NSMGNQWAGWTMP-EILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPT 248 (321)
Q Consensus 176 ~~~~~~~~g~~~~-~~~~~~PD~GP~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~Ar~IA~~vR~~g------GGL~~ 248 (321)
+. ++ ++++|+|||||+++||++|+|+||||+||||||||| |+|+++||+||++||+|| |||++
T Consensus 149 ~~---------~~~~~~~~~PD~Gp~~~~~~~G~t~vGAr~~liayNV~L-t~~~~~a~~IA~~vr~~gr~~~~~Ggl~~ 218 (541)
T 1tt9_A 149 LP---------EKLKQAEWVPDFGPSSFVPSWGATVTGARKFLIAFNINL-LSTKEQAHRIALNLREQGRGKDQPGRLKK 218 (541)
T ss_pred ch---------hhccCCCCCCCCCCCCCCCCCceEEEecCcceeeeeeec-cccHHHHHHHHHHhhhcCCCCCCCCCccc
Confidence 54 34 678999999999999999999999999999999999 899999999999999998 99999
Q ss_pred ceEeeeeeC-CCcEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCceeeeeccCCChHHHH
Q 020781 249 VQTLGLVHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIV 307 (321)
Q Consensus 249 VqAmgl~~~-~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~~Gv~V~~~y~~~f~~~~il 307 (321)
||||||+|+ +|++||||||+||++||+|+||++|+++|++|||+|++++++||+|.+.|
T Consensus 219 Vqamg~~~~~~~~~qVs~Nl~d~~~t~~~~v~e~v~~~A~~~gv~v~gse~vGl~P~~al 278 (541)
T 1tt9_A 219 VQGIGWYLEEKNLAQVSTNLLDFEVTALHTVYEEARREAQELNLPVVGSQLVGLVPLKAL 278 (541)
T ss_pred eeEeeEeecCCCeEEEEecccCCccCCHHHHHHHHHHHHHHcCCccccceEeccchHHHH
Confidence 999999987 89999999999999999999999999999999999999999999999654
No 3
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=51.26 E-value=13 Score=25.05 Aligned_cols=33 Identities=9% Similarity=-0.009 Sum_probs=27.6
Q ss_pred ceeceeCC---CCCHHHHHHHHHHHHHHHhhhcCCc
Q 020781 117 DIVFHPLA---RASLDEAAWLAKAVAADIGSRFQVP 149 (321)
Q Consensus 117 viPf~Pl~---~~t~eec~~lA~~lg~~ig~~l~vP 149 (321)
-.||+=|. +.|.++.-+|++.+.+.+.+.+++|
T Consensus 2 ~MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg~p 37 (63)
T 2x4k_A 2 MMPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGAN 37 (63)
T ss_dssp CCCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 35665553 7899999999999999999999988
No 4
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=37.23 E-value=19 Score=29.98 Aligned_cols=40 Identities=30% Similarity=0.209 Sum_probs=31.2
Q ss_pred ceeceeCC-CCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc
Q 020781 117 DIVFHPLA-RASLDEAAWLAKAVAADIGSRFQVPVFLYAAA 156 (321)
Q Consensus 117 viPf~Pl~-~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A 156 (321)
+|-=.|+. +-|..+-.+.++.++++|..++++||+|.-+.
T Consensus 57 iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DER 97 (138)
T 1nu0_A 57 IIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDER 97 (138)
T ss_dssp EEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred EEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 33336764 45666778889999999999999999999765
No 5
>1b4u_B LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: c.56.6.1 PDB: 1bou_B
Probab=32.87 E-value=46 Score=30.78 Aligned_cols=68 Identities=9% Similarity=0.075 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHhccCCCCCCCc--eEeeeeeC-C----------C-----cEEEEeecCCCCCCCHHHHHHHHHHHH--
Q 020781 227 TDVAATRRIARMVSARGGGLPTV--QTLGLVHG-E----------D-----STEIACMLLEPNQVGADRVQNRVEKLA-- 286 (321)
Q Consensus 227 ~dl~~Ar~IA~~vR~~gGGL~~V--qAmgl~~~-~----------g-----~~qVS~NL~d~~~t~~~~V~e~v~~~A-- 286 (321)
.|-++|++|++.+...+ +.-. ..+++.|+ . + +||||+|...+-.-++.+.++.=+.++
T Consensus 98 G~peLA~~i~~~l~~~g--~~~~~~~~~~lDHG~~vpL~~l~p~~d~~~ipVVpisv~~~~~p~~~~~~~~~lG~aL~~~ 175 (302)
T 1b4u_B 98 GHPDLAWHIAQSLILDE--FDMTIMNQMDVDHGCTVPLSMIFGEPEEWPCKVIPFPVNVVTYPPPSGKRCFALGDSIRAA 175 (302)
T ss_dssp CCHHHHHHHHHHHHHTT--CCCEEESSCCBCHHHHHHHHHHHCSCSSCSSEEEEEEBCCSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC--CCeeccCCcCCCceeeehHHHhcCcccCCcCcEEEEeecCCCCCCCCHHHHHHHHHHHHHH
Confidence 45799999999987654 3322 33677665 1 3 689999988765566665555544444
Q ss_pred -H----HcCCceeee
Q 020781 287 -A----EEGLDVEKG 296 (321)
Q Consensus 287 -~----~~Gv~V~~~ 296 (321)
+ +.||-|+++
T Consensus 176 ~~~~~~d~~VlIIgS 190 (302)
T 1b4u_B 176 VESFPEDLNVHVWGT 190 (302)
T ss_dssp HHTSSSCCEEEEEEE
T ss_pred HHhcCCCCCEEEEEe
Confidence 2 356777764
No 6
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=31.64 E-value=33 Score=28.70 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=25.5
Q ss_pred CCcccchhhhhccccceeeeccccccCC-HHHHHHHHHHHhhCCCeEEEeecCCCCCC
Q 020781 6 GSKKNKNKKIANQSILVCCKLFISESRN-LAALDAIERAARLDTETVIVNKFEDRIYN 62 (321)
Q Consensus 6 ~~~~~~~~~~~~~~~lveCvpN~SEGR~-~~vie~I~~a~~~~~gv~LLd~~~D~dyN 62 (321)
|+++.++-..+.|+++ .+.|||-..+ +.+.+.|++.+ ++.++++..-.+|.
T Consensus 1 ~~~~~~~~~~~~~mki--lIvY~S~tGnT~~vA~~Ia~~l----~~d~~~I~~~~~y~ 52 (171)
T 4ici_A 1 GQQKQKMNSKHSNSKI--LVAYFSATGTTARAAEKLGAAV----GGDLYPIAPAQPYT 52 (171)
T ss_dssp ------------CCCE--EEEECCSSSHHHHHHHHHHHHH----TCEEEECCBSSCCC
T ss_pred CCCCCccccccCCCCE--EEEEECCCChHHHHHHHHHHHh----CCCeEEEeeCCCCC
Confidence 4566666666666664 5779997666 45666676665 45677777655544
No 7
>2z5b_A Protein YPL144W, DMP1; proteasome, chaperone; 1.96A {Saccharomyces cerevisiae} PDB: 2z5c_A
Probab=29.26 E-value=33 Score=29.58 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=34.5
Q ss_pred CCCccCCCCCccccceeceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeecccC
Q 020781 103 ETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAH 157 (321)
Q Consensus 103 ~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~lg~~ig~~l~vPVyLYg~A~ 157 (321)
+.+.-..|.-|--|+|.- ||-+...+--.++|+++|+-|+.+.+.|||.==...
T Consensus 69 r~~~~~~~~~~~~~visT-~L~~t~~~~~~D~a~rlAkiLarR~~~P~YVg~S~~ 122 (151)
T 2z5b_A 69 MRDRHINLKSGGSNVVGI-PLLDTKDDRIRDMARHMATIISERFNRPCYVTWSSL 122 (151)
T ss_dssp CC----------CCEEEE-EEECCSCHHHHHHHHHHHHHHHHHHTSCEEEEEEEC
T ss_pred ccccccccccCCCCceEE-EeeccCCccHHHHHHHHHHHHHHHhCCCeEEEeecc
Confidence 444445677777788874 555566677899999999999999999999864433
No 8
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=23.19 E-value=22 Score=26.84 Aligned_cols=44 Identities=14% Similarity=0.164 Sum_probs=35.0
Q ss_pred CCCCCcccchhhhhcc-------ccceeeeccccccCCHHHHHHHHHHHhh
Q 020781 3 FGPGSKKNKNKKIANQ-------SILVCCKLFISESRNLAALDAIERAARL 46 (321)
Q Consensus 3 ~~~~~~~~~~~~~~~~-------~~lveCvpN~SEGR~~~vie~I~~a~~~ 46 (321)
.|-|++++--+|+-.| .+|-.|||++...+...+||-+..|+..
T Consensus 11 ~~~~~~~a~erER~Rm~~lN~aF~~LR~~VP~~p~~kKLSKiEtLr~Ai~Y 61 (68)
T 2lfh_A 11 MGGGKGPAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDY 61 (68)
T ss_dssp SSCCCCCCBCCCSCSSSHHHHHHHHHHHHCCCCCTTCCCCHHHHHHHHHHH
T ss_pred cCCCCCCccHHHHHHHHHHHHHHHHHHHHCCCCCCCCCccHHHHHHHHHHH
Confidence 4668887777776665 3588899999999999999999888764
No 9
>2bbe_A Hypothetical protein SO0527; MCSG, structural genomics, PSI, protein structure in midwest center for structural genomics; 1.97A {Shewanella oneidensis}
Probab=22.82 E-value=94 Score=23.39 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=37.8
Q ss_pred hhhhhccccceeeeccccccCCHHHHHHHHH---HHhhCCCeEEEeecCCCCCCcceEEEee
Q 020781 12 NKKIANQSILVCCKLFISESRNLAALDAIER---AARLDTETVIVNKFEDRIYNRARYTLVS 70 (321)
Q Consensus 12 ~~~~~~~~~lveCvpN~SEGR~~~vie~I~~---a~~~~~gv~LLd~~~D~dyNRtv~T~vG 70 (321)
+|+.| ++-.+-....+-+|+..+..+.+.+ ..++-||+--.+++.|.+. ...|.+.-
T Consensus 7 ~~~~M-~mi~v~~~~~vkpg~~~~f~~~~~~~~~~~~~epGcl~~~~~~~~~~-p~~~~~~E 66 (108)
T 2bbe_A 7 YKINQ-QQIVCVASFLSKEGKTEALIAALASLIPDTRREAGCIRYELNVSRDE-PRRVTFVE 66 (108)
T ss_dssp CEECS-SSEEEEEEEEECTTCHHHHHHHHHTTHHHHHTSTTEEEEEEEECSSS-TTEEEEEE
T ss_pred hHhcC-cEEEEEEEEEECCCcHHHHHHHHHHHHHHHhcCCCcEEEEEEecCCC-CCEEEEEE
Confidence 34444 3445556667889988777666554 4567799999999988653 33455555
No 10
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=22.57 E-value=2.4e+02 Score=21.73 Aligned_cols=66 Identities=9% Similarity=0.174 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHH----HhcCCCCCccCCCCC-ccccceeceeC---CCCCHHHHHHHHHHHHHHHhhhcCCc
Q 020781 84 PLRQTIIAMADAAY----GAINLETHSGAHPRL-GVVDDIVFHPL---ARASLDEAAWLAKAVAADIGSRFQVP 149 (321)
Q Consensus 84 ~v~eaa~~~~~~A~----elIDm~~H~G~HPR~-GavDviPf~Pl---~~~t~eec~~lA~~lg~~ig~~l~vP 149 (321)
.+.+++-++..+++ +.+-..-|.+.+=.. |--|-|.++=| ++.|.|+--++++.+.+.+.+.|++|
T Consensus 18 ~l~~~~~~~l~~~lgkP~~~~~v~~~~~~~~~~~g~~~~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~ 91 (119)
T 2os5_A 18 NFEERLTDLLAESMNKPRNRIAIEVLAGQRITHGASRNPVAVIKVESIGALSADDNIRHTQKITQFCQDTLKLP 91 (119)
T ss_dssp THHHHHHHHHHHHHTCCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHCcChHHEEEEEECCccEEEcCCCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 67777777777666 333333333332222 33477777665 36899999999999999999999987
No 11
>2pd1_A Hypothetical protein; unknown function, NE2512 protein, structural genomics, APC72 2, protein structure initiative; 1.86A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=22.08 E-value=1.5e+02 Score=21.88 Aligned_cols=49 Identities=10% Similarity=0.093 Sum_probs=35.0
Q ss_pred cceeeeccccccCCHHHHHHHHH---HHhhCCCeEEEeecCCCCCCcceEEEeec
Q 020781 20 ILVCCKLFISESRNLAALDAIER---AARLDTETVIVNKFEDRIYNRARYTLVSY 71 (321)
Q Consensus 20 ~lveCvpN~SEGR~~~vie~I~~---a~~~~~gv~LLd~~~D~dyNRtv~T~vG~ 71 (321)
-.+-....+-+|+..+..+.+.+ ..++-||+--.+++.| +...|.+.-.
T Consensus 6 i~v~~~~~vkpg~~~~~~~~l~~~~~~~~~epG~l~~~~~~~---~p~~~~~~E~ 57 (104)
T 2pd1_A 6 LALFVRLEAKPGQEAALADFLASALPLANAESGTTAWFALKF---GPSTFGVFDA 57 (104)
T ss_dssp EEEEEEEEBCTTCHHHHHHHHHHTHHHHHTCTTEEEEEEEEC---SSSEEEEEEE
T ss_pred EEEEEEEEeCCCCHHHHHHHHHHHHHHHhCCCCcEEEEEEec---CCCEEEEEEE
Confidence 34555567888988776666555 4566799999999998 5556777763
No 12
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=21.22 E-value=1.1e+02 Score=32.41 Aligned_cols=70 Identities=11% Similarity=0.102 Sum_probs=52.6
Q ss_pred CCeEEeeeeecCCCHHHHHHHHHHhccCCCCCCCceEeeeeeCCCcEEEEeecCCCCCCCHHHHHHHHHHHHHHcCC
Q 020781 215 PWVALYNIPIMSTDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGL 291 (321)
Q Consensus 215 ~~liayNV~L~t~dl~~Ar~IA~~vR~~gGGL~~VqAmgl~~~~g~~qVS~NL~d~~~t~~~~V~e~v~~~A~~~Gv 291 (321)
|-=|.|==.|+..| .+.+|+++.-..|.+.+ ||--|=..++|+||+|+.|--+ ..+..++-.++|++.|+
T Consensus 477 ~~ki~~ideld~~d-~v~~r~~~~~~~~~~~~--ikPygd~~~DG~VqlsftLPv~----~~~Ae~AA~qla~kMGl 546 (763)
T 3kp1_A 477 PEKIVYIDELDEND-NVNVRMEETKEFRHSSM--IKPEVEWQADGTVLLTMFLPTS----KRVAEFAAIEFAKKMNL 546 (763)
T ss_dssp GGGCCCCCCSCSSS-SHHHHHHHTGGGC--CE--ECCCSSSTTCCEEEEEEEESSC----HHHHHHHHHHHHHHTTC
T ss_pred ccceeeecccCccc-cHHHHHHHHHHHhccCc--cCCcccccCCceEEEEEeccCC----hHHHHHHHHHHHHHcCC
Confidence 33567777788888 78889998877776643 5555544558999999988543 58889999999999997
No 13
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=20.93 E-value=1e+02 Score=23.04 Aligned_cols=28 Identities=11% Similarity=0.135 Sum_probs=22.4
Q ss_pred eEEEeeccccCCCCCcccchHHHHHHHHHHHHHHhcC
Q 020781 65 RYTLVSYVVHDSTGTAIYSPLRQTIIAMADAAYGAIN 101 (321)
Q Consensus 65 v~T~vG~~~~p~~~~~~~~~v~eaa~~~~~~A~elID 101 (321)
++.++|+ +|+ ..-+|+-+++.+|.+.++
T Consensus 5 viElvGs--S~~-------S~edAi~nAi~~AskTl~ 32 (68)
T 2cc6_A 5 KVLLTGT--SEE-------SFTAAADDAIDRAEDTLD 32 (68)
T ss_dssp EEEEEEE--ESS-------CHHHHHHHHHHHHHHHCS
T ss_pred EEEEEEC--CCC-------CHHHHHHHHHHHHHhccc
Confidence 6788997 444 789999999999997764
Done!