Query 020784
Match_columns 321
No_of_seqs 255 out of 2107
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 08:08:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vu4_A KMHSV2; beta-propeller 100.0 7.5E-33 2.6E-37 253.9 29.5 222 82-319 16-259 (355)
2 4gqb_B Methylosome protein 50; 100.0 9.7E-32 3.3E-36 245.9 28.8 224 83-318 80-318 (344)
3 2ynn_A Coatomer subunit beta'; 100.0 7.3E-31 2.5E-35 235.3 31.7 227 82-318 52-290 (304)
4 1got_B GT-beta; complex (GTP-b 100.0 1.2E-30 4E-35 237.6 33.2 227 81-319 51-289 (340)
5 3ow8_A WD repeat-containing pr 100.0 1.1E-30 3.9E-35 236.3 32.3 225 82-319 77-309 (321)
6 3frx_A Guanine nucleotide-bind 100.0 1.5E-30 5E-35 235.0 32.2 228 81-319 13-256 (319)
7 2ynn_A Coatomer subunit beta'; 100.0 1.6E-30 5.5E-35 233.1 31.6 227 81-319 9-247 (304)
8 1vyh_C Platelet-activating fac 100.0 5.3E-31 1.8E-35 246.2 29.4 226 81-319 104-357 (410)
9 1vyh_C Platelet-activating fac 100.0 4E-31 1.4E-35 247.0 28.2 227 82-319 147-399 (410)
10 3ow8_A WD repeat-containing pr 100.0 1.8E-30 6E-35 235.0 30.2 227 81-319 28-267 (321)
11 2pbi_B Guanine nucleotide-bind 100.0 7.3E-30 2.5E-34 233.9 33.2 229 81-319 60-303 (354)
12 4g56_B MGC81050 protein; prote 100.0 7.3E-31 2.5E-35 241.0 24.9 227 82-319 91-331 (357)
13 4gqb_B Methylosome protein 50; 100.0 2.7E-30 9.2E-35 236.4 26.4 201 82-293 124-334 (344)
14 2pm7_B Protein transport prote 100.0 4.4E-29 1.5E-33 223.0 29.8 229 81-319 5-273 (297)
15 1nr0_A Actin interacting prote 100.0 1.8E-29 6.1E-34 247.5 29.5 210 80-298 54-278 (611)
16 1erj_A Transcriptional repress 100.0 8.1E-29 2.8E-33 229.9 32.3 220 87-319 125-377 (393)
17 2xzm_R RACK1; ribosome, transl 100.0 1.2E-28 4E-33 224.5 32.6 227 81-318 17-273 (343)
18 4h5i_A Guanine nucleotide-exch 100.0 8.9E-29 3E-33 227.8 31.1 181 130-319 136-331 (365)
19 3zwl_B Eukaryotic translation 100.0 1.3E-28 4.5E-33 223.4 31.8 230 80-319 27-278 (369)
20 3iz6_a 40S ribosomal protein R 100.0 4.9E-30 1.7E-34 237.1 22.2 228 81-319 62-317 (380)
21 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.6E-29 3.3E-33 225.5 29.8 227 82-319 12-271 (345)
22 1got_B GT-beta; complex (GTP-b 100.0 1.8E-28 6E-33 223.2 30.8 225 82-319 94-331 (340)
23 3bg1_A Protein SEC13 homolog; 100.0 4.7E-29 1.6E-33 224.9 26.2 228 81-319 9-281 (316)
24 1erj_A Transcriptional repress 100.0 4.6E-28 1.6E-32 224.8 32.5 225 83-319 62-329 (393)
25 3frx_A Guanine nucleotide-bind 100.0 6.9E-28 2.4E-32 217.5 32.2 223 82-319 62-305 (319)
26 4ery_A WD repeat-containing pr 100.0 6E-28 2.1E-32 216.2 31.5 224 82-318 20-255 (312)
27 4g56_B MGC81050 protein; prote 100.0 3.1E-29 1.1E-33 230.1 23.2 200 82-292 136-345 (357)
28 3mmy_A MRNA export factor; mRN 100.0 8.8E-28 3E-32 217.9 32.6 229 80-319 34-334 (368)
29 2pbi_B Guanine nucleotide-bind 100.0 8.9E-28 3.1E-32 220.0 32.6 224 83-319 104-345 (354)
30 2hes_X YDR267CP; beta-propelle 100.0 1.5E-27 5E-32 216.3 29.7 225 84-319 57-316 (330)
31 1gxr_A ESG1, transducin-like e 100.0 1.9E-26 6.3E-31 206.9 35.8 225 83-319 95-325 (337)
32 3dm0_A Maltose-binding peripla 100.0 1.1E-27 3.8E-32 237.9 30.6 228 82-319 379-621 (694)
33 4aow_A Guanine nucleotide-bind 100.0 5.4E-27 1.8E-31 211.1 31.5 229 81-318 34-274 (340)
34 1nr0_A Actin interacting prote 100.0 6E-28 2E-32 236.7 26.9 223 84-319 17-258 (611)
35 3jrp_A Fusion protein of prote 100.0 6.1E-27 2.1E-31 213.4 30.5 230 81-319 7-275 (379)
36 2ymu_A WD-40 repeat protein; u 100.0 6.6E-27 2.3E-31 226.1 32.0 221 82-319 341-568 (577)
37 3dwl_C Actin-related protein 2 100.0 6.1E-29 2.1E-33 227.9 16.0 223 83-319 9-270 (377)
38 4ery_A WD repeat-containing pr 100.0 1.2E-26 3.9E-31 207.8 30.5 227 81-319 61-298 (312)
39 2hes_X YDR267CP; beta-propelle 100.0 1.3E-26 4.3E-31 210.2 30.4 224 82-318 11-267 (330)
40 2xzm_R RACK1; ribosome, transl 100.0 8.5E-27 2.9E-31 212.2 29.3 224 82-319 73-328 (343)
41 3f3f_A Nucleoporin SEH1; struc 100.0 1E-26 3.5E-31 208.4 28.7 202 80-291 6-250 (351)
42 1k8k_C P40, ARP2/3 complex 41 100.0 2.5E-26 8.6E-31 209.3 29.8 224 83-318 6-262 (372)
43 4h5i_A Guanine nucleotide-exch 100.0 1E-26 3.6E-31 214.0 27.4 194 83-290 131-343 (365)
44 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-25 4.2E-30 204.9 34.3 227 82-319 58-323 (345)
45 1yfq_A Cell cycle arrest prote 100.0 7.9E-27 2.7E-31 210.4 25.0 224 83-319 54-311 (342)
46 3gre_A Serine/threonine-protei 100.0 1.2E-26 4.1E-31 217.1 27.0 207 79-298 57-300 (437)
47 4e54_B DNA damage-binding prot 100.0 2E-27 6.9E-32 223.3 21.3 225 83-318 117-362 (435)
48 3iz6_a 40S ribosomal protein R 100.0 5.7E-27 2E-31 216.5 23.2 226 82-319 105-363 (380)
49 3dm0_A Maltose-binding peripla 100.0 4.3E-26 1.5E-30 226.4 31.1 225 82-319 427-681 (694)
50 1gxr_A ESG1, transducin-like e 100.0 9.7E-26 3.3E-30 202.1 30.2 225 82-319 48-284 (337)
51 1r5m_A SIR4-interacting protei 100.0 4.4E-26 1.5E-30 210.7 28.0 222 84-319 107-349 (425)
52 3dw8_B Serine/threonine-protei 100.0 1.7E-26 5.7E-31 216.0 25.3 222 84-319 27-361 (447)
53 2ymu_A WD-40 repeat protein; u 100.0 1.4E-25 4.9E-30 216.7 31.9 221 82-319 300-527 (577)
54 2pm7_B Protein transport prote 100.0 5.1E-26 1.7E-30 203.1 26.5 198 82-289 50-284 (297)
55 3ei3_B DNA damage-binding prot 100.0 9.9E-26 3.4E-30 207.3 29.1 204 82-298 70-290 (383)
56 3v7d_B Cell division control p 100.0 4.2E-25 1.4E-29 208.2 33.6 223 82-319 159-410 (464)
57 4a11_B DNA excision repair pro 100.0 2.2E-25 7.5E-30 205.1 30.7 201 81-292 39-278 (408)
58 1sq9_A Antiviral protein SKI8; 99.9 7.3E-26 2.5E-30 208.4 26.7 205 82-298 59-330 (397)
59 4ggc_A P55CDC, cell division c 99.9 4.8E-25 1.6E-29 196.5 31.1 222 88-319 28-303 (318)
60 4aez_A CDC20, WD repeat-contai 99.9 5.6E-25 1.9E-29 204.2 32.7 226 82-319 131-368 (401)
61 3k26_A Polycomb protein EED; W 99.9 3.4E-26 1.2E-30 207.4 23.8 222 84-319 68-354 (366)
62 1sq9_A Antiviral protein SKI8; 99.9 1.1E-25 3.8E-30 207.2 27.3 224 81-319 12-310 (397)
63 4aez_A CDC20, WD repeat-contai 99.9 8.2E-25 2.8E-29 203.1 32.7 221 87-319 95-322 (401)
64 2pm9_A Protein WEB1, protein t 99.9 3.7E-26 1.3E-30 211.4 23.4 224 83-319 65-325 (416)
65 2oaj_A Protein SNI1; WD40 repe 99.9 1.4E-25 4.8E-30 229.1 29.4 201 82-296 14-248 (902)
66 2aq5_A Coronin-1A; WD40 repeat 99.9 4.2E-25 1.5E-29 204.8 30.1 224 81-316 77-329 (402)
67 1p22_A F-BOX/WD-repeat protein 99.9 3.9E-25 1.3E-29 207.4 29.8 216 83-319 131-353 (435)
68 3k26_A Polycomb protein EED; W 99.9 3.5E-26 1.2E-30 207.4 21.8 200 82-290 112-366 (366)
69 3vl1_A 26S proteasome regulato 99.9 2.1E-25 7.3E-30 207.0 27.4 223 87-319 99-353 (420)
70 3v7d_B Cell division control p 99.9 7.9E-25 2.7E-29 206.3 31.4 220 82-319 118-369 (464)
71 3mkq_A Coatomer beta'-subunit; 99.9 7.5E-25 2.6E-29 220.0 32.9 226 82-317 52-289 (814)
72 3mkq_A Coatomer beta'-subunit; 99.9 8.6E-25 2.9E-29 219.6 31.9 226 82-319 10-247 (814)
73 2pm9_A Protein WEB1, protein t 99.9 8.4E-27 2.9E-31 215.8 15.8 202 82-293 110-340 (416)
74 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.6E-24 5.5E-29 203.6 31.5 217 82-319 115-336 (445)
75 4ggc_A P55CDC, cell division c 99.9 1.3E-24 4.6E-29 193.5 29.3 201 82-292 64-317 (318)
76 3f3f_A Nucleoporin SEH1; struc 99.9 3.4E-25 1.2E-29 198.4 25.6 206 82-297 54-344 (351)
77 4gga_A P55CDC, cell division c 99.9 1.5E-24 5.2E-29 202.6 30.8 226 82-319 144-383 (420)
78 3odt_A Protein DOA1; ubiquitin 99.9 4.6E-24 1.6E-28 189.5 32.0 220 81-318 14-242 (313)
79 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7.8E-25 2.7E-29 206.4 28.6 224 86-319 5-326 (450)
80 3i2n_A WD repeat-containing pr 99.9 3.2E-25 1.1E-29 200.6 24.7 229 82-319 15-279 (357)
81 3sfz_A APAF-1, apoptotic pepti 99.9 9.3E-25 3.2E-29 229.3 31.4 226 81-319 611-901 (1249)
82 2j04_B YDR362CP, TAU91; beta p 99.9 5.5E-26 1.9E-30 218.9 19.3 225 84-319 132-416 (524)
83 1p22_A F-BOX/WD-repeat protein 99.9 8.4E-25 2.9E-29 205.2 26.8 217 82-319 170-402 (435)
84 1pgu_A Actin interacting prote 99.9 1.1E-24 3.9E-29 211.2 28.4 222 83-319 16-271 (615)
85 3jro_A Fusion protein of prote 99.9 3.1E-25 1.1E-29 222.6 24.5 230 81-319 5-273 (753)
86 1yfq_A Cell cycle arrest prote 99.9 6.1E-25 2.1E-29 198.0 23.5 223 81-319 7-270 (342)
87 1r5m_A SIR4-interacting protei 99.9 7.6E-25 2.6E-29 202.3 24.6 224 82-319 146-413 (425)
88 3bg1_A Protein SEC13 homolog; 99.9 2.1E-25 7.2E-30 200.9 19.8 199 82-289 54-292 (316)
89 3vl1_A 26S proteasome regulato 99.9 3.9E-24 1.3E-28 198.5 28.5 223 82-318 136-407 (420)
90 3ei3_B DNA damage-binding prot 99.9 2.6E-24 9E-29 197.8 27.0 221 83-318 116-370 (383)
91 2w18_A PALB2, fancn, partner a 99.9 8.3E-25 2.8E-29 197.2 22.9 194 82-289 108-356 (356)
92 4aow_A Guanine nucleotide-bind 99.9 1.8E-23 6.1E-28 188.0 31.6 225 82-319 83-325 (340)
93 3zwl_B Eukaryotic translation 99.9 1.3E-23 4.4E-28 190.4 30.4 230 81-319 70-334 (369)
94 4gga_A P55CDC, cell division c 99.9 1.1E-23 3.8E-28 196.7 30.3 221 87-319 107-339 (420)
95 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.3E-23 7.9E-28 195.7 32.4 218 82-319 156-379 (445)
96 3gre_A Serine/threonine-protei 99.9 3.3E-24 1.1E-28 200.5 26.2 206 83-298 109-367 (437)
97 2j04_B YDR362CP, TAU91; beta p 99.9 1.8E-25 6.1E-30 215.3 18.0 196 83-291 205-429 (524)
98 3odt_A Protein DOA1; ubiquitin 99.9 3.4E-23 1.2E-27 183.8 31.0 216 82-317 56-283 (313)
99 3i2n_A WD repeat-containing pr 99.9 1.3E-24 4.5E-29 196.6 21.9 202 81-294 107-357 (357)
100 3dw8_B Serine/threonine-protei 99.9 1.4E-24 4.7E-29 202.9 22.4 199 86-295 94-378 (447)
101 3sfz_A APAF-1, apoptotic pepti 99.9 3.6E-25 1.2E-29 232.4 20.6 223 84-318 960-1196(1249)
102 3jrp_A Fusion protein of prote 99.9 1.4E-23 4.7E-28 191.1 28.1 204 82-294 52-291 (379)
103 1l0q_A Surface layer protein; 99.9 1.3E-22 4.4E-27 186.6 34.7 221 86-318 32-261 (391)
104 1k8k_C P40, ARP2/3 complex 41 99.9 6.9E-24 2.3E-28 193.1 25.9 197 82-290 49-274 (372)
105 4gq1_A NUP37; propeller, trans 99.9 4.9E-24 1.7E-28 197.9 23.9 226 84-319 88-378 (393)
106 1pgu_A Actin interacting prote 99.9 4E-23 1.4E-27 200.3 31.4 228 82-319 60-316 (615)
107 2xyi_A Probable histone-bindin 99.9 7.7E-24 2.6E-28 198.6 25.2 225 82-318 125-397 (430)
108 2j04_A TAU60, YPL007P, hypothe 99.9 9.1E-24 3.1E-28 201.7 24.7 218 83-320 83-350 (588)
109 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.5E-23 1.2E-27 195.1 28.2 223 83-317 100-371 (450)
110 3lrv_A PRE-mRNA-splicing facto 99.9 2.7E-24 9.2E-29 195.5 19.4 210 92-319 43-279 (343)
111 3bws_A Protein LP49; two-domai 99.9 2E-22 6.9E-27 187.8 32.6 226 83-319 167-419 (433)
112 4a11_B DNA excision repair pro 99.9 1.9E-23 6.6E-28 192.0 25.3 203 83-298 97-373 (408)
113 4e54_B DNA damage-binding prot 99.9 1.7E-23 5.7E-28 196.5 21.3 225 82-318 161-418 (435)
114 4gq1_A NUP37; propeller, trans 99.9 8.4E-23 2.9E-27 189.5 23.8 198 81-289 132-388 (393)
115 3mmy_A MRNA export factor; mRN 99.9 5.4E-23 1.9E-27 186.2 21.7 198 81-289 82-345 (368)
116 2oaj_A Protein SNI1; WD40 repe 99.9 8E-23 2.7E-27 208.7 25.1 201 82-291 148-520 (902)
117 3vu4_A KMHSV2; beta-propeller 99.9 2.4E-22 8.4E-27 183.9 25.7 188 87-292 60-273 (355)
118 2aq5_A Coronin-1A; WD40 repeat 99.9 1.2E-22 4E-27 188.4 23.2 220 87-318 36-285 (402)
119 3dwl_C Actin-related protein 2 99.9 1.1E-23 3.8E-28 192.8 15.9 194 82-289 52-280 (377)
120 2j04_A TAU60, YPL007P, hypothe 99.9 2.5E-23 8.5E-28 198.7 18.8 213 86-319 16-286 (588)
121 2xyi_A Probable histone-bindin 99.9 2.1E-22 7.1E-27 188.9 24.0 199 82-291 178-411 (430)
122 3jro_A Fusion protein of prote 99.9 1.8E-22 6E-27 202.6 24.4 201 82-291 50-286 (753)
123 2w18_A PALB2, fancn, partner a 99.9 2.2E-21 7.7E-26 174.8 27.6 226 87-319 41-345 (356)
124 1l0q_A Surface layer protein; 99.9 1.7E-20 5.7E-25 172.5 31.6 209 98-319 3-218 (391)
125 3bws_A Protein LP49; two-domai 99.9 6.3E-21 2.1E-25 177.7 27.9 223 86-319 123-363 (433)
126 3lrv_A PRE-mRNA-splicing facto 99.9 1.6E-21 5.3E-26 177.2 21.0 192 86-292 77-294 (343)
127 2hqs_A Protein TOLB; TOLB, PAL 99.8 2.7E-18 9.4E-23 160.4 27.4 217 83-312 176-407 (415)
128 2ojh_A Uncharacterized protein 99.8 1.3E-18 4.3E-23 152.2 22.4 227 83-319 39-290 (297)
129 1ri6_A Putative isomerase YBHE 99.8 1.4E-17 4.7E-22 149.4 28.3 228 84-319 36-295 (343)
130 3vgz_A Uncharacterized protein 99.8 8.8E-17 3E-21 145.0 31.6 220 86-318 41-289 (353)
131 2hqs_A Protein TOLB; TOLB, PAL 99.8 2E-17 6.8E-22 154.6 27.6 212 97-319 143-372 (415)
132 1nir_A Nitrite reductase; hemo 99.8 3E-17 1E-21 158.7 29.5 222 87-318 180-496 (543)
133 3vgz_A Uncharacterized protein 99.8 8.2E-17 2.8E-21 145.2 29.6 223 87-318 90-331 (353)
134 3u4y_A Uncharacterized protein 99.8 1.3E-16 4.4E-21 143.1 28.4 216 91-318 3-238 (331)
135 3u4y_A Uncharacterized protein 99.8 2.7E-16 9.3E-21 140.9 30.3 221 86-319 41-291 (331)
136 1nir_A Nitrite reductase; hemo 99.8 1.2E-16 4E-21 154.5 29.4 199 92-300 144-365 (543)
137 1pby_B Quinohemoprotein amine 99.8 4.5E-17 1.6E-21 145.6 24.7 225 87-318 35-297 (337)
138 3hfq_A Uncharacterized protein 99.8 3.7E-16 1.3E-20 141.3 28.9 226 86-319 40-304 (347)
139 2ecf_A Dipeptidyl peptidase IV 99.8 1.6E-17 5.5E-22 165.4 21.0 220 85-318 36-354 (741)
140 1xfd_A DIP, dipeptidyl aminope 99.8 5.1E-18 1.7E-22 168.4 15.8 229 87-318 18-323 (723)
141 2oit_A Nucleoporin 214KDA; NH2 99.7 5.7E-17 1.9E-21 152.5 18.3 197 87-291 38-279 (434)
142 1jmx_B Amine dehydrogenase; ox 99.7 4.3E-16 1.5E-20 140.1 23.0 211 90-318 4-312 (349)
143 1pby_B Quinohemoprotein amine 99.7 1.2E-16 4.3E-21 142.7 18.4 199 87-302 83-322 (337)
144 3scy_A Hypothetical bacterial 99.7 3.8E-15 1.3E-19 135.5 28.1 226 84-319 48-324 (361)
145 2z3z_A Dipeptidyl aminopeptida 99.7 2.5E-16 8.7E-21 156.0 21.9 221 86-319 82-374 (706)
146 3o4h_A Acylamino-acid-releasin 99.7 2.1E-16 7.2E-21 153.4 19.7 216 86-318 22-263 (582)
147 1ri6_A Putative isomerase YBHE 99.7 4.7E-15 1.6E-19 132.7 26.7 216 87-312 85-334 (343)
148 1jmx_B Amine dehydrogenase; ox 99.7 1E-15 3.5E-20 137.6 22.1 209 87-300 44-335 (349)
149 2ecf_A Dipeptidyl peptidase IV 99.7 3.7E-16 1.3E-20 155.5 21.0 229 83-318 149-442 (741)
150 1jof_A Carboxy-CIS,CIS-muconat 99.7 7.5E-15 2.6E-19 134.4 26.8 232 87-319 41-328 (365)
151 2z3z_A Dipeptidyl aminopeptida 99.7 1.2E-15 4E-20 151.2 22.8 232 84-318 119-418 (706)
152 2ojh_A Uncharacterized protein 99.7 3.3E-15 1.1E-19 130.3 23.0 199 106-319 22-235 (297)
153 1k32_A Tricorn protease; prote 99.7 1.9E-15 6.5E-20 156.6 21.4 217 87-319 246-490 (1045)
154 3hfq_A Uncharacterized protein 99.7 1.3E-13 4.3E-18 124.6 29.5 204 84-295 84-324 (347)
155 2oit_A Nucleoporin 214KDA; NH2 99.7 1.9E-15 6.6E-20 142.0 17.7 159 128-298 37-230 (434)
156 1k32_A Tricorn protease; prote 99.7 2.4E-14 8.1E-19 148.4 27.2 221 82-319 200-439 (1045)
157 1xfd_A DIP, dipeptidyl aminope 99.6 2.9E-15 1E-19 148.5 17.9 231 84-318 112-427 (723)
158 1z68_A Fibroblast activation p 99.6 1.9E-16 6.5E-21 157.3 9.4 227 90-318 20-329 (719)
159 3o4h_A Acylamino-acid-releasin 99.6 7.4E-15 2.5E-19 142.5 18.7 213 86-319 65-300 (582)
160 4a5s_A Dipeptidyl peptidase 4 99.6 2.4E-14 8.2E-19 143.1 18.3 226 87-316 18-334 (740)
161 3pe7_A Oligogalacturonate lyas 99.6 1.7E-13 5.8E-18 125.3 21.0 217 91-318 41-307 (388)
162 2oiz_A Aromatic amine dehydrog 99.6 8.7E-13 3E-17 120.8 24.4 215 90-313 54-360 (361)
163 1q7f_A NHL, brain tumor CG1071 99.5 2.4E-11 8.1E-16 106.7 30.1 221 86-317 30-267 (286)
164 3fvz_A Peptidyl-glycine alpha- 99.5 6.5E-12 2.2E-16 113.2 26.4 220 86-315 24-306 (329)
165 3scy_A Hypothetical bacterial 99.5 9.1E-12 3.1E-16 113.0 27.5 201 85-295 99-344 (361)
166 3pe7_A Oligogalacturonate lyas 99.5 1.4E-12 4.8E-17 119.2 21.7 233 83-319 78-369 (388)
167 2gop_A Trilobed protease; beta 99.5 7.1E-12 2.4E-16 112.8 25.9 209 86-312 59-311 (347)
168 3c5m_A Oligogalacturonate lyas 99.5 1.4E-12 4.6E-17 119.3 18.3 217 88-318 38-300 (396)
169 1z68_A Fibroblast activation p 99.5 1E-13 3.5E-18 137.7 10.9 219 87-319 61-374 (719)
170 1q7f_A NHL, brain tumor CG1071 99.5 4.5E-11 1.5E-15 104.8 26.3 193 86-291 77-281 (286)
171 2dg1_A DRP35, lactonase; beta 99.5 3.6E-10 1.2E-14 101.2 31.7 225 84-318 43-297 (333)
172 1jof_A Carboxy-CIS,CIS-muconat 99.5 4.6E-11 1.6E-15 109.0 26.1 198 88-292 85-343 (365)
173 3azo_A Aminopeptidase; POP fam 99.4 6.8E-12 2.3E-16 123.2 20.1 222 90-318 81-352 (662)
174 3e5z_A Putative gluconolactona 99.4 2.7E-10 9.1E-15 100.6 27.5 215 86-319 28-275 (296)
175 3c5m_A Oligogalacturonate lyas 99.4 1.3E-11 4.3E-16 112.7 18.6 222 90-319 85-369 (396)
176 3dsm_A Uncharacterized protein 99.4 3.8E-10 1.3E-14 101.6 28.0 215 87-318 45-284 (328)
177 4a5s_A Dipeptidyl peptidase 4 99.4 7.6E-12 2.6E-16 125.0 18.1 216 89-318 65-380 (740)
178 3dsm_A Uncharacterized protein 99.4 2E-10 7E-15 103.4 25.4 199 105-318 16-242 (328)
179 2xdw_A Prolyl endopeptidase; a 99.4 1.6E-10 5.5E-15 114.8 26.6 229 84-318 123-397 (710)
180 3fvz_A Peptidyl-glycine alpha- 99.4 2.4E-10 8.1E-15 102.9 23.4 196 86-290 91-322 (329)
181 2oiz_A Aromatic amine dehydrog 99.3 1E-09 3.5E-14 100.2 26.8 207 105-318 30-322 (361)
182 3no2_A Uncharacterized protein 99.3 9.9E-10 3.4E-14 96.7 25.3 208 96-318 4-230 (276)
183 1qks_A Cytochrome CD1 nitrite 99.3 6.1E-09 2.1E-13 100.8 31.8 196 94-299 164-382 (567)
184 3azo_A Aminopeptidase; POP fam 99.3 1.9E-10 6.4E-15 112.9 21.3 224 83-318 21-311 (662)
185 1xip_A Nucleoporin NUP159; bet 99.3 3.5E-10 1.2E-14 104.2 20.6 168 87-276 39-231 (388)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4.3E-09 1.5E-13 93.0 26.4 221 87-318 19-285 (314)
187 1xip_A Nucleoporin NUP159; bet 99.3 2E-10 6.7E-15 105.8 17.5 169 129-317 39-230 (388)
188 2mad_H Methylamine dehydrogena 99.2 1.6E-08 5.5E-13 92.9 29.3 218 90-318 70-336 (373)
189 2bkl_A Prolyl endopeptidase; m 99.2 4.3E-10 1.5E-14 111.5 19.9 226 84-317 119-379 (695)
190 1qks_A Cytochrome CD1 nitrite 99.2 1.9E-08 6.5E-13 97.4 30.6 219 87-319 198-458 (567)
191 3g4e_A Regucalcin; six bladed 99.2 1.4E-08 4.8E-13 89.8 27.4 217 87-319 14-260 (297)
192 2dg1_A DRP35, lactonase; beta 99.2 2.8E-09 9.7E-14 95.3 20.6 195 86-293 6-217 (333)
193 2gop_A Trilobed protease; beta 99.2 8.3E-09 2.8E-13 92.6 23.3 207 87-318 16-279 (347)
194 3no2_A Uncharacterized protein 99.1 6.7E-09 2.3E-13 91.3 20.7 159 154-317 13-181 (276)
195 1yr2_A Prolyl oligopeptidase; 99.1 9.1E-09 3.1E-13 102.7 23.9 225 86-318 163-424 (741)
196 3sjl_D Methylamine dehydrogena 99.1 1.3E-08 4.3E-13 93.5 22.8 219 90-317 82-348 (386)
197 1rwi_B Serine/threonine-protei 99.1 1.3E-08 4.3E-13 88.0 21.1 215 87-315 25-248 (270)
198 3hrp_A Uncharacterized protein 99.1 7.7E-08 2.6E-12 89.3 27.6 196 86-294 131-358 (409)
199 2bkl_A Prolyl endopeptidase; m 99.1 2.7E-09 9.1E-14 105.8 18.3 199 89-293 171-400 (695)
200 2ghs_A AGR_C_1268P; regucalcin 99.1 4E-07 1.4E-11 81.6 30.4 214 87-319 50-290 (326)
201 1rwi_B Serine/threonine-protei 99.1 1E-08 3.6E-13 88.5 19.3 196 86-293 67-267 (270)
202 2ece_A 462AA long hypothetical 99.1 1.4E-07 4.9E-12 87.5 26.5 224 95-320 93-400 (462)
203 2z2n_A Virginiamycin B lyase; 99.1 7.8E-07 2.7E-11 77.4 30.1 211 86-314 15-238 (299)
204 3e5z_A Putative gluconolactona 99.0 9.5E-08 3.2E-12 84.0 23.9 201 84-293 67-289 (296)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.5E-07 5E-12 83.0 24.6 201 86-290 71-299 (314)
206 3iuj_A Prolyl endopeptidase; h 99.0 4.5E-08 1.5E-12 97.0 22.8 225 83-317 126-387 (693)
207 2xdw_A Prolyl endopeptidase; a 99.0 3.4E-08 1.1E-12 98.0 21.9 201 88-292 173-416 (710)
208 2qe8_A Uncharacterized protein 99.0 1.4E-07 4.8E-12 85.2 24.1 228 86-317 17-307 (343)
209 2mad_H Methylamine dehydrogena 99.0 6.1E-07 2.1E-11 82.3 28.0 202 89-306 128-367 (373)
210 3c75_H MADH, methylamine dehyd 99.0 3.8E-08 1.3E-12 91.7 20.0 221 90-319 122-389 (426)
211 3sjl_D Methylamine dehydrogena 98.9 2.8E-07 9.6E-12 84.6 23.6 209 89-311 140-384 (386)
212 2z2n_A Virginiamycin B lyase; 98.9 6.9E-06 2.4E-10 71.3 31.6 211 86-315 57-280 (299)
213 2iwa_A Glutamine cyclotransfer 98.9 1.8E-06 6.1E-11 75.2 25.1 194 87-291 22-238 (266)
214 1yr2_A Prolyl oligopeptidase; 98.9 4.9E-07 1.7E-11 90.1 24.4 220 94-317 115-378 (741)
215 2qc5_A Streptogramin B lactona 98.9 1.8E-05 6E-10 68.7 31.4 212 86-314 20-243 (300)
216 3dr2_A Exported gluconolactona 98.8 2.1E-06 7.1E-11 75.9 24.8 214 86-318 45-294 (305)
217 2qc5_A Streptogramin B lactona 98.8 1.8E-05 6.1E-10 68.7 30.3 211 86-314 62-285 (300)
218 2hz6_A Endoplasmic reticulum t 98.8 1E-08 3.5E-13 93.9 7.6 187 96-302 8-204 (369)
219 2iwa_A Glutamine cyclotransfer 98.8 1.9E-05 6.4E-10 68.7 27.8 176 131-318 24-223 (266)
220 1mda_H Methylamine dehydrogena 98.7 6E-07 2.1E-11 82.1 18.2 207 90-308 69-364 (368)
221 1fwx_A Nitrous oxide reductase 98.7 2E-06 6.9E-11 82.5 21.5 219 95-318 99-405 (595)
222 2ghs_A AGR_C_1268P; regucalcin 98.7 1.6E-05 5.4E-10 71.1 25.6 188 85-277 89-290 (326)
223 3nok_A Glutaminyl cyclase; bet 98.7 6.5E-06 2.2E-10 71.2 21.5 148 138-300 63-220 (268)
224 3nol_A Glutamine cyclotransfer 98.7 2.7E-05 9.3E-10 67.2 25.4 156 131-300 46-211 (262)
225 3nol_A Glutamine cyclotransfer 98.6 1.1E-05 3.9E-10 69.6 22.5 183 84-277 41-243 (262)
226 3hrp_A Uncharacterized protein 98.6 1.5E-05 5.2E-10 73.8 24.3 187 91-288 176-408 (409)
227 3g4e_A Regucalcin; six bladed 98.6 2.3E-05 7.8E-10 68.9 24.2 193 85-279 53-263 (297)
228 1npe_A Nidogen, entactin; glyc 98.6 0.00018 6.2E-09 61.9 29.4 216 87-313 37-263 (267)
229 3nok_A Glutaminyl cyclase; bet 98.6 1.5E-05 5E-10 69.0 21.8 183 82-276 51-253 (268)
230 1mda_H Methylamine dehydrogena 98.6 4.3E-06 1.5E-10 76.4 18.9 202 107-318 47-331 (368)
231 3mbr_X Glutamine cyclotransfer 98.5 0.00013 4.5E-09 62.3 26.1 157 130-300 23-189 (243)
232 1kb0_A Quinohemoprotein alcoho 98.5 6.2E-06 2.1E-10 81.5 20.4 79 239-318 457-538 (677)
233 3mbr_X Glutamine cyclotransfer 98.5 8.9E-05 3E-09 63.4 24.1 182 84-276 19-222 (243)
234 3c75_H MADH, methylamine dehyd 98.5 3E-05 1E-09 72.1 22.9 203 106-318 99-336 (426)
235 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.00016 5.6E-09 65.4 26.6 189 97-299 53-267 (376)
236 1yiq_A Quinohemoprotein alcoho 98.5 5.9E-06 2E-10 81.8 18.0 81 238-319 454-537 (689)
237 3iuj_A Prolyl endopeptidase; h 98.5 2.3E-05 7.7E-10 77.6 21.9 196 89-293 178-408 (693)
238 3dr2_A Exported gluconolactona 98.4 5.1E-05 1.7E-09 66.9 21.8 190 84-280 84-298 (305)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00012 4.1E-09 66.2 24.5 183 97-298 103-304 (376)
240 3hxj_A Pyrrolo-quinoline quino 98.4 3.6E-05 1.2E-09 67.9 19.2 184 96-300 107-293 (330)
241 2ece_A 462AA long hypothetical 98.4 0.00014 4.9E-09 67.5 23.1 174 137-319 93-339 (462)
242 2qe8_A Uncharacterized protein 98.3 1.7E-05 6E-10 71.3 16.2 196 84-287 65-318 (343)
243 2hz6_A Endoplasmic reticulum t 98.2 1.3E-07 4.3E-12 86.6 -0.9 143 138-297 8-156 (369)
244 1kb0_A Quinohemoprotein alcoho 98.2 0.00012 4.1E-09 72.3 19.1 191 96-300 77-356 (677)
245 3hxj_A Pyrrolo-quinoline quino 98.1 0.00015 5.3E-09 63.8 17.9 184 87-290 138-324 (330)
246 2p4o_A Hypothetical protein; p 98.1 0.0035 1.2E-07 55.0 27.9 221 86-319 32-276 (306)
247 2xzh_A Clathrin heavy chain 1; 98.1 0.0038 1.3E-07 55.4 25.9 118 106-235 49-170 (365)
248 1npe_A Nidogen, entactin; glyc 98.1 0.0034 1.2E-07 53.8 28.4 209 97-318 1-224 (267)
249 4a2l_A BT_4663, two-component 98.1 0.0033 1.1E-07 62.8 28.4 194 88-294 175-390 (795)
250 1kv9_A Type II quinohemoprotei 98.1 0.00018 6.2E-09 70.8 18.7 82 237-319 436-520 (668)
251 1bpo_A Protein (clathrin); cla 98.1 0.0047 1.6E-07 56.9 26.2 130 106-247 48-187 (494)
252 1yiq_A Quinohemoprotein alcoho 98.0 0.00037 1.3E-08 68.9 20.2 190 96-299 70-347 (689)
253 2fp8_A Strictosidine synthase; 98.0 0.0047 1.6E-07 54.5 25.7 198 89-300 22-278 (322)
254 2ad6_A Methanol dehydrogenase 98.0 0.002 7E-08 62.1 23.5 80 237-317 442-524 (571)
255 4a2l_A BT_4663, two-component 97.9 0.0076 2.6E-07 60.2 27.8 197 85-297 356-577 (795)
256 1flg_A Protein (quinoprotein e 97.8 0.0077 2.6E-07 58.2 24.7 80 238-319 465-548 (582)
257 2ad6_A Methanol dehydrogenase 97.8 0.0052 1.8E-07 59.3 22.5 152 97-251 115-338 (571)
258 1kv9_A Type II quinohemoprotei 97.7 0.0011 3.6E-08 65.4 17.5 190 96-299 66-342 (668)
259 1fwx_A Nitrous oxide reductase 97.7 0.0049 1.7E-07 59.1 20.7 168 138-317 100-346 (595)
260 1w6s_A Methanol dehydrogenase 97.7 0.011 3.7E-07 57.4 23.2 82 237-319 451-535 (599)
261 3amr_A 3-phytase; beta-propell 97.6 0.026 9E-07 50.6 22.9 188 100-302 44-276 (355)
262 2xe4_A Oligopeptidase B; hydro 97.6 0.005 1.7E-07 61.3 19.8 194 87-288 175-398 (751)
263 2fp8_A Strictosidine synthase; 97.6 0.029 1E-06 49.3 22.7 199 87-290 81-313 (322)
264 1k3i_A Galactose oxidase precu 97.5 0.013 4.4E-07 57.3 21.4 201 89-293 246-500 (656)
265 3v9f_A Two-component system se 97.5 0.073 2.5E-06 53.0 26.3 195 85-294 257-482 (781)
266 3v9f_A Two-component system se 97.4 0.026 9E-07 56.2 22.6 197 85-298 406-618 (781)
267 1w6s_A Methanol dehydrogenase 97.4 0.013 4.6E-07 56.7 19.4 144 154-299 129-351 (599)
268 1flg_A Protein (quinoprotein e 97.3 0.079 2.7E-06 51.1 23.0 194 96-300 68-365 (582)
269 3amr_A 3-phytase; beta-propell 97.2 0.11 3.8E-06 46.6 22.2 160 155-318 49-249 (355)
270 3tc9_A Hypothetical hydrolase; 97.2 0.13 4.6E-06 47.4 26.4 201 87-295 138-375 (430)
271 3qqz_A Putative uncharacterize 97.1 0.11 3.8E-06 44.5 25.9 191 86-288 27-251 (255)
272 3v65_B Low-density lipoprotein 97.0 0.18 6.1E-06 45.8 25.1 204 86-300 116-328 (386)
273 2p4o_A Hypothetical protein; p 96.9 0.18 6.1E-06 43.9 21.9 183 86-280 72-279 (306)
274 3v65_B Low-density lipoprotein 96.8 0.26 9E-06 44.6 26.5 192 88-291 79-278 (386)
275 3ei3_A DNA damage-binding prot 96.8 0.38 1.3E-05 50.2 24.5 177 108-290 809-999 (1158)
276 4hw6_A Hypothetical protein, I 96.7 0.36 1.2E-05 44.6 26.5 199 87-294 140-377 (433)
277 1k3i_A Galactose oxidase precu 96.7 0.15 5E-06 49.7 19.9 194 90-294 190-445 (656)
278 3v64_C Agrin; beta propeller, 96.7 0.3 1E-05 43.6 23.9 202 87-300 74-285 (349)
279 3tc9_A Hypothetical hydrolase; 96.7 0.12 4.1E-06 47.7 18.1 137 177-318 138-287 (430)
280 3v64_C Agrin; beta propeller, 96.6 0.36 1.2E-05 43.0 28.2 194 86-291 34-235 (349)
281 1ijq_A LDL receptor, low-densi 96.4 0.43 1.5E-05 41.8 28.0 202 87-300 31-248 (316)
282 2p9w_A MAL S 1 allergenic prot 96.4 0.51 1.7E-05 41.9 21.4 151 133-292 18-217 (334)
283 3m0c_C LDL receptor, low-densi 96.3 1 3.6E-05 44.9 29.9 184 99-293 397-592 (791)
284 3p5b_L Low density lipoprotein 96.3 0.65 2.2E-05 42.3 28.4 205 86-301 112-331 (400)
285 1ijq_A LDL receptor, low-densi 96.1 0.66 2.2E-05 40.6 30.0 181 99-290 3-195 (316)
286 1n7d_A LDL receptor, low-densi 96.0 0.036 1.2E-06 54.7 11.0 202 87-300 407-624 (699)
287 2xe4_A Oligopeptidase B; hydro 96.0 0.028 9.5E-07 55.9 9.9 99 220-319 177-289 (751)
288 3p5b_L Low density lipoprotein 95.9 1 3.5E-05 40.9 30.2 184 98-291 84-278 (400)
289 3m0c_C LDL receptor, low-densi 95.9 1.7 5.8E-05 43.4 26.7 204 86-300 424-642 (791)
290 3sov_A LRP-6, low-density lipo 95.7 1 3.5E-05 39.6 26.3 202 87-300 36-248 (318)
291 4hw6_A Hypothetical protein, I 95.6 0.23 7.8E-06 45.9 14.0 136 177-318 140-290 (433)
292 1xi4_A Clathrin heavy chain; a 95.6 0.068 2.3E-06 56.2 11.1 172 106-290 48-235 (1630)
293 3sov_A LRP-6, low-density lipo 95.5 1.2 4.2E-05 39.0 26.6 183 99-290 6-197 (318)
294 3kya_A Putative phosphatase; s 95.4 0.77 2.6E-05 43.2 16.8 140 177-318 140-327 (496)
295 3ei3_A DNA damage-binding prot 95.3 3.3 0.00011 43.2 26.3 149 155-306 491-656 (1158)
296 1n7d_A LDL receptor, low-densi 94.9 0.084 2.9E-06 52.1 9.2 179 100-290 380-571 (699)
297 4a0p_A LRP6, LRP-6, low-densit 94.9 2.9 9.9E-05 40.5 26.8 201 87-299 38-246 (628)
298 3ott_A Two-component system se 94.3 4.3 0.00015 39.9 23.2 192 85-293 21-223 (758)
299 3pbp_A Nucleoporin NUP82; beta 94.2 0.5 1.7E-05 43.5 11.6 106 182-290 29-158 (452)
300 3kya_A Putative phosphatase; s 93.9 4.2 0.00014 38.2 23.2 200 86-297 186-482 (496)
301 3s94_A LRP-6, low-density lipo 93.6 5.5 0.00019 38.4 23.1 200 87-298 41-251 (619)
302 3qqz_A Putative uncharacterize 93.5 3.2 0.00011 35.3 24.3 175 128-313 27-236 (255)
303 3pbp_A Nucleoporin NUP82; beta 93.1 5.3 0.00018 36.7 17.2 104 92-203 27-158 (452)
304 1xi4_A Clathrin heavy chain; a 92.9 1.7 5.8E-05 46.1 14.3 195 91-298 71-297 (1630)
305 4a0p_A LRP6, LRP-6, low-densit 92.8 7.2 0.00025 37.7 28.6 186 99-293 8-200 (628)
306 3sre_A PON1, serum paraoxonase 92.6 5.4 0.00019 35.6 22.8 157 154-315 81-281 (355)
307 2xn4_A Kelch-like protein 2; s 92.5 4.5 0.00015 34.5 19.8 187 96-292 61-278 (302)
308 2vpj_A Kelch-like protein 12; 92.5 4.5 0.00015 34.4 21.0 189 95-292 61-280 (301)
309 2xbg_A YCF48-like protein; pho 92.4 5.1 0.00017 34.9 23.4 186 86-286 122-318 (327)
310 2xn4_A Kelch-like protein 2; s 92.2 5 0.00017 34.2 18.7 186 97-292 16-231 (302)
311 3ott_A Two-component system se 91.9 10 0.00034 37.2 23.8 190 85-293 62-263 (758)
312 2uvk_A YJHT; unknown function, 91.7 6.3 0.00022 34.5 16.3 135 156-296 168-348 (357)
313 1zgk_A Kelch-like ECH-associat 91.7 5.8 0.0002 34.0 16.3 187 96-292 70-289 (308)
314 1zgk_A Kelch-like ECH-associat 91.7 5.8 0.0002 34.0 18.2 192 92-292 20-242 (308)
315 2vpj_A Kelch-like protein 12; 91.6 5.8 0.0002 33.7 20.5 187 96-292 14-233 (301)
316 2be1_A Serine/threonine-protei 91.0 0.4 1.4E-05 42.7 6.4 60 154-213 65-140 (339)
317 2xbg_A YCF48-like protein; pho 90.9 7.5 0.00026 33.8 25.7 193 86-297 36-241 (327)
318 3ii7_A Kelch-like protein 7; p 89.7 8.8 0.0003 32.7 22.5 188 96-292 55-274 (306)
319 3sbq_A Nitrous-oxide reductase 89.5 4.6 0.00016 38.5 12.3 95 223-318 329-452 (638)
320 4asc_A Kelch repeat and BTB do 89.1 10 0.00034 32.5 19.4 148 139-292 98-279 (315)
321 2be1_A Serine/threonine-protei 88.9 1.4 4.9E-05 39.2 8.2 112 187-301 12-141 (339)
322 4gq2_M Nucleoporin NUP120; bet 87.3 0.85 2.9E-05 46.6 6.5 39 260-299 237-275 (950)
323 3s25_A Hypothetical 7-bladed b 86.7 15 0.00051 31.8 18.2 204 93-317 21-239 (302)
324 2ism_A Putative oxidoreductase 84.5 21 0.0007 31.4 18.9 63 131-203 34-114 (352)
325 4fhn_B Nucleoporin NUP120; pro 84.4 0.84 2.9E-05 47.5 4.8 39 260-299 239-277 (1139)
326 3s94_A LRP-6, low-density lipo 84.2 30 0.001 33.2 25.4 183 100-291 12-203 (619)
327 3ii7_A Kelch-like protein 7; p 84.2 18 0.00062 30.6 19.9 186 97-292 12-227 (306)
328 3sbq_A Nitrous-oxide reductase 83.3 32 0.0011 32.8 15.4 128 89-223 326-500 (638)
329 1bpo_A Protein (clathrin); cla 83.3 28 0.00097 32.1 20.6 129 155-292 47-190 (494)
330 3f7f_A Nucleoporin NUP120; nuc 83.1 2 6.7E-05 42.2 6.4 39 259-300 222-260 (729)
331 3a9g_A Putative uncharacterize 82.2 26 0.00088 30.9 17.9 134 131-276 32-215 (354)
332 2p9w_A MAL S 1 allergenic prot 81.8 27 0.00091 30.8 17.2 139 178-318 15-202 (334)
333 3sre_A PON1, serum paraoxonase 79.6 33 0.0011 30.4 22.3 76 220-298 226-308 (355)
334 2ism_A Putative oxidoreductase 79.3 32 0.0011 30.1 23.5 77 87-166 32-115 (352)
335 3das_A Putative oxidoreductase 77.8 37 0.0013 30.0 18.9 150 131-292 35-235 (347)
336 2xzh_A Clathrin heavy chain 1; 77.0 39 0.0013 29.9 23.5 104 90-204 71-190 (365)
337 2zwa_A Leucine carboxyl methyl 76.2 59 0.002 31.5 19.7 195 95-293 396-638 (695)
338 2woz_A Kelch repeat and BTB do 75.8 36 0.0012 28.9 19.0 131 156-292 127-289 (318)
339 1cru_A Protein (soluble quinop 70.5 65 0.0022 29.5 21.5 35 256-292 226-261 (454)
340 4asc_A Kelch repeat and BTB do 67.1 57 0.002 27.6 22.8 186 99-292 7-223 (315)
341 2g8s_A Glucose/sorbosone dehyd 65.6 38 0.0013 29.7 9.8 96 220-318 21-146 (353)
342 2woz_A Kelch repeat and BTB do 64.5 65 0.0022 27.2 15.8 108 96-205 109-233 (318)
343 1tl2_A L10, protein (tachylect 62.6 49 0.0017 27.5 9.0 98 177-281 42-155 (236)
344 2uvk_A YJHT; unknown function, 57.2 93 0.0032 26.7 18.2 73 96-170 19-100 (357)
345 4gq2_M Nucleoporin NUP120; bet 55.0 22 0.00075 36.2 6.9 37 131-174 239-275 (950)
346 3f7f_A Nucleoporin NUP120; nuc 53.5 22 0.00074 34.9 6.2 33 136-175 228-260 (729)
347 1cru_A Protein (soluble quinop 52.5 88 0.003 28.5 10.1 35 258-293 26-60 (454)
348 3das_A Putative oxidoreductase 51.6 80 0.0027 27.8 9.3 36 257-293 30-65 (347)
349 2g8s_A Glucose/sorbosone dehyd 46.5 1.5E+02 0.005 25.8 15.1 18 259-276 197-215 (353)
350 4fhn_B Nucleoporin NUP120; pro 44.5 20 0.00067 37.3 4.7 34 135-175 245-278 (1139)
351 1tl2_A L10, protein (tachylect 37.8 45 0.0015 27.7 4.9 62 221-288 45-114 (236)
352 3s25_A Hypothetical 7-bladed b 36.2 2E+02 0.0068 24.4 18.9 108 195-317 89-200 (302)
353 2zwa_A Leucine carboxyl methyl 36.1 3E+02 0.01 26.4 17.4 149 139-292 397-579 (695)
354 1wa7_B TIP, hypothetical 28.7 33.7 50 0.0017 16.8 3.0 12 17-28 6-17 (26)
355 2kxc_B ESPF-like protein; IRTK 28.8 37 0.0013 20.4 2.1 12 11-22 31-42 (48)
356 4a9v_A PHOX; hydrolase, beta-p 25.1 2.6E+02 0.0088 26.6 8.4 60 259-318 476-548 (592)
357 2zux_A YESW protein; beta-prop 22.1 5.1E+02 0.017 24.5 16.6 131 158-299 231-409 (591)
358 1uhe_A Aspartate 1-decarboxyla 22.0 79 0.0027 22.2 3.2 18 281-298 17-34 (97)
359 3c12_A FLGD, flagellar protein 21.8 1.5E+02 0.005 22.0 5.1 75 195-273 42-121 (138)
360 1vc3_B L-aspartate-alpha-decar 21.5 83 0.0028 22.1 3.2 19 280-298 17-35 (96)
361 3plx_B Aspartate 1-decarboxyla 20.8 86 0.0029 22.2 3.2 19 280-298 17-35 (102)
No 1
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.5e-33 Score=253.94 Aligned_cols=222 Identities=27% Similarity=0.426 Sum_probs=187.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iW 161 (321)
..|...|+|++|+|||++||+|++++++||++++.+......+ +.+..+++.++++.+++++++ |++|+||
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~------d~~v~iW 86 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTGV------KEVVHIW 86 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECSS------TTEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEECC------ccEEEEE
Confidence 4577899999999999999999999999999998877666553 458888999999998887754 5899999
Q ss_pred eCCCCcEEEEEeeCCceeEEEEeCCeEEEEECCEEEEEEcCCc-EEEEEEeccCCCCceEEEeeCCCceEEEee-cCCCC
Q 020784 162 DDHQSRCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCP-GLQKG 239 (321)
Q Consensus 162 D~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~I~iwd~~~~-~~~~~l~~~~~~~~~~~~s~~~d~~~la~s-Gs~dg 239 (321)
|..+++.+.++.+...|.++.++++.++++.++.|++||+.++ +.++++.. +..++++++ .+++++ |+.||
T Consensus 87 d~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~----~~la~~sg~~~g 159 (355)
T 3vu4_A 87 DDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN----GLLVYSNEFNLG 159 (355)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET----TEEEEEESSCTT
T ss_pred ECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc----cEEEEeCCCcCc
Confidence 9999999999999899999999999999999999999999887 77666665 455677776 345555 89999
Q ss_pred cEEEEeeCCcc-----------------eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC-C
Q 020784 240 QVRVEHYASKR-----------------TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP-S 301 (321)
Q Consensus 240 ~V~i~d~~~~~-----------------~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g-~ 301 (321)
.|++||+.... +..+.+|.+.|++++|+|+|++|||||.||+.|+|||+++++++.+++.| |
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 99999998754 67899999999999999999999999999965999999999999999855 5
Q ss_pred ccee--EEEeecCceEEEee
Q 020784 302 ISAQ--SGLWLSSAWLRVLR 319 (321)
Q Consensus 302 ~~~~--~~~s~d~~~la~~~ 319 (321)
...+ +++++||++|+.+.
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEE
Confidence 5443 47788999998864
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.7e-32 Score=245.93 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=172.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeee---ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDF---ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v 158 (321)
.+...|++++|++|+. |++|+. +.|+|||+++++......+ .|.+.|..++++++++.+++++ .|++|
T Consensus 80 ~~~~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs-------~d~~i 151 (344)
T 4gqb_B 80 QTEAGVADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS-------KDICI 151 (344)
T ss_dssp EESSCEEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-------TTSCE
T ss_pred ccCCCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-------CCCeE
Confidence 3456899999999976 555555 5589999998875443332 2678999999999999999888 68999
Q ss_pred EEEeCCCCcEEEEEeeC-CceeEEEEeCCe---EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCC-CceEEE
Q 020784 159 MIWDDHQSRCIGELSFR-SEVRSVKLRRDR---IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGV-GSLVLV 232 (321)
Q Consensus 159 ~iWD~~~~~~~~~~~~~-~~v~~v~~~~~~---~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~-d~~~la 232 (321)
+|||+++++++..+..+ ..|.++.|+++. ++.++ |++|++||+++++.+..+..+.....+.++...+ ++.+++
T Consensus 152 ~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred EEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence 99999999999888754 589999998753 44554 5799999999998888876544433444444444 345666
Q ss_pred eecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCC-CEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeE--EE
Q 020784 233 CPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQS--GL 308 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg-~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~--~~ 308 (321)
+|+.||.|+|||+.++. +.++.+|...|++|+|+|+| ++|||||.|++ |||||+++++++. + .+|...+. +|
T Consensus 232 -sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~~-~-~~H~~~V~~v~~ 307 (344)
T 4gqb_B 232 -FGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELFR-S-QAHRDFVRDATW 307 (344)
T ss_dssp -EEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEEE-E-CCCSSCEEEEEE
T ss_pred -EeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEEE-E-cCCCCCEEEEEE
Confidence 59999999999998755 67899999999999999998 58999999999 9999999998875 3 47776554 55
Q ss_pred eecCce-EEEe
Q 020784 309 WLSSAW-LRVL 318 (321)
Q Consensus 309 s~d~~~-la~~ 318 (321)
++++++ |+.+
T Consensus 308 sp~~~~llas~ 318 (344)
T 4gqb_B 308 SPLNHSLLTTV 318 (344)
T ss_dssp CSSSTTEEEEE
T ss_pred eCCCCeEEEEE
Confidence 667765 5444
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.3e-31 Score=235.33 Aligned_cols=227 Identities=9% Similarity=0.057 Sum_probs=184.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|++++++|++|+.++ |+|||+.+++.+..... |.+.|..++++++++.+++++ .|++|++
T Consensus 52 ~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs-------~D~~v~l 123 (304)
T 2ynn_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGS-------DDLTVKL 123 (304)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEE-------TTSCEEE
T ss_pred eccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC-CCCcEEEEEEcCCCCEEEEEC-------CCCeEEE
Confidence 45777999999999999999999865 88999999987766655 788999999999999998887 7899999
Q ss_pred EeCCCCc-EEEEEee-CCceeEEEEeCC---eEEEEE-CCEEEEEEcCCcEEEEEEec-cCCCCceEEEeeCCCceEEEe
Q 020784 161 WDDHQSR-CIGELSF-RSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 161 WD~~~~~-~~~~~~~-~~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l~~-~~~~~~~~~~s~~~d~~~la~ 233 (321)
||++++. ....+.. ...|.+++|+++ .++.++ +++|++||+++.+....+.. +...+..+++++.+++.+|+
T Consensus 124 Wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~- 202 (304)
T 2ynn_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI- 202 (304)
T ss_dssp EEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEE-
T ss_pred EECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEE-
Confidence 9998874 4445554 457999999873 455555 57999999987776666654 33455667777777778888
Q ss_pred ecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce-eEEEeec
Q 020784 234 PGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA-QSGLWLS 311 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~-~~~~s~d 311 (321)
+|+.||.|++||+.++. +.++.+|...|++++|+|++++|||||.||+ |||||++++++++++..+.... .++++++
T Consensus 203 s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~-i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (304)
T 2ynn_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNVGLERSWCIATHPT 281 (304)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCCEEEEECCSSSSEEEEEECTT
T ss_pred EEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCe-EEEEECCCCceeeeccCCCccEEEEEECCC
Confidence 59999999999998765 6789999999999999999999999999999 9999999999999996544332 3455676
Q ss_pred Cc--eEEEe
Q 020784 312 SA--WLRVL 318 (321)
Q Consensus 312 ~~--~la~~ 318 (321)
+. +||.+
T Consensus 282 ~~~~~~asg 290 (304)
T 2ynn_A 282 GRKNYIASG 290 (304)
T ss_dssp CGGGCEEEE
T ss_pred CCceEEEEe
Confidence 64 56654
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-30 Score=237.63 Aligned_cols=227 Identities=12% Similarity=0.115 Sum_probs=186.1
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|.+.|++++|+|||++|++|+.|+ |+|||+.+.+....... |.+.+..++++++++.+++++ .|+.|+
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~-------~d~~v~ 122 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGG-------LDNICS 122 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSSEEEEEE-------TTCEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCCEEEEEe-------CCCeEE
Confidence 467889999999999999999999866 88999998887766665 678899999999999998888 679999
Q ss_pred EEeCCCCc----EEEEEee-CCceeEEEEeCCe-EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEE
Q 020784 160 IWDDHQSR----CIGELSF-RSEVRSVKLRRDR-IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 160 iWD~~~~~----~~~~~~~-~~~v~~v~~~~~~-~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la 232 (321)
+||+.++. ....+.. ...|.++.|.++. ++.++ ++.|++||+.+++.+.++..|...+..+++++ ++.+++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~ 200 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP--DTRLFV 200 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC--CCCEEE
Confidence 99998653 3444443 3578889887654 44444 57999999999999999998877655555554 557777
Q ss_pred eecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC---cceeEEE
Q 020784 233 CPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS---ISAQSGL 308 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~---~~~~~~~ 308 (321)
+|+.||.|++||+..+. ..++.+|...|++++|+|+|.+||+|+.||+ |+|||+++++.+.++.... ....+.+
T Consensus 201 -sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 201 -SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp -EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred -EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceEEEEE
Confidence 59999999999998765 6689999999999999999999999999999 9999999999988875332 2234578
Q ss_pred eecCceEEEee
Q 020784 309 WLSSAWLRVLR 319 (321)
Q Consensus 309 s~d~~~la~~~ 319 (321)
+++|++|+++.
T Consensus 279 s~~g~~l~~g~ 289 (340)
T 1got_B 279 SKSGRLLLAGY 289 (340)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEC
Confidence 89999998764
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-30 Score=236.28 Aligned_cols=225 Identities=16% Similarity=0.131 Sum_probs=189.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|.+++|++++.+|++|+.++ |+|||+.+++.+..... +...+..++++++++.+++++ .+++|++
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~g~-------~dg~v~i 148 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWTLAFSPDSQYLATGT-------HVGKVNI 148 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CTTCCCCEEECTTSSEEEEEC-------TTSEEEE
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC-CCccEEEEEECCCCCEEEEEc-------CCCcEEE
Confidence 57888999999999999999998755 88999999887665554 456777889999999988877 6799999
Q ss_pred EeCCCCcEEEEEeeCC-ceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 161 WDDHQSRCIGELSFRS-EVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 161 WD~~~~~~~~~~~~~~-~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
||+++++....+..+. .|.+++|+++. ++++. ++.|++||+++++.++++..|..++..+++++ ++.+|+ +|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp--d~~~l~-s~s 225 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP--DSQLLV-TAS 225 (321)
T ss_dssp EETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT--TSCEEE-EEC
T ss_pred EEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC--CCCEEE-EEc
Confidence 9999998887776554 79999999863 55554 57999999999999999999888777777766 457887 599
Q ss_pred CCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee--EEEeecCc
Q 020784 237 QKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ--SGLWLSSA 313 (321)
Q Consensus 237 ~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~~s~d~~ 313 (321)
.||.|++||+.... ..++.+|...|++++|+|+|.+||+|+.|++ |+|||+.++++++++. +|...+ +.++++++
T Consensus 226 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 226 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFF-DHQDQVWGVKYNGNGS 303 (321)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS
T ss_pred CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-EEEEeCCCCEEEEEEc-CCCCcEEEEEECCCCC
Confidence 99999999998755 5689999999999999999999999999999 9999999999999994 555444 46778888
Q ss_pred eEEEee
Q 020784 314 WLRVLR 319 (321)
Q Consensus 314 ~la~~~ 319 (321)
+|+.+.
T Consensus 304 ~l~s~~ 309 (321)
T 3ow8_A 304 KIVSVG 309 (321)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 988753
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-30 Score=235.01 Aligned_cols=228 Identities=11% Similarity=0.100 Sum_probs=184.9
Q ss_pred cCCCCCCeEEEEEcCCC-CEEEEEcCCc-EEEEEecCCce-----eEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCC
Q 020784 81 SSSPPPTLLHISFNQDH-GCFAAGTDHG-FRIYNCDPFRE-----IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg-~~lasg~~~g-v~vw~~~~~~~-----~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~ 153 (321)
...|.+.|++++|++++ ++|++|+.|+ |++|++..... ...... |.+.|..++++++++.+++++
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s------- 84 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLTADGAYALSAS------- 84 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEE-------
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEECCCCCEEEEEe-------
Confidence 35788999999999965 8999998865 88999864322 122222 788999999999999999888
Q ss_pred CCCcEEEEeCCCCcEEEEEeeC-CceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCC---
Q 020784 154 PLNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGV--- 226 (321)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~--- 226 (321)
.|++|+|||+++++.+..+..+ ..|.+++|+++. ++.++ +++|++||++. +.+.++.+|...+..+.+.+..
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC----
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCC
Confidence 7899999999999998888755 589999998763 45554 56999999974 5667888887776666766642
Q ss_pred -CceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce
Q 020784 227 -GSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA 304 (321)
Q Consensus 227 -d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~ 304 (321)
++..++ +|+.||.|++||+.... ...+.+|...|++++|+|+|++||+|+.||+ |+|||+.+++++.++.......
T Consensus 164 ~~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~v~ 241 (319)
T 3frx_A 164 DDSVTII-SAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSAQDEVF 241 (319)
T ss_dssp --CCEEE-EEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEECCSCEE
T ss_pred CCccEEE-EEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecCCCcEE
Confidence 334666 59999999999998765 5578999999999999999999999999999 9999999999999997655555
Q ss_pred eEEEeecCceEEEee
Q 020784 305 QSGLWLSSAWLRVLR 319 (321)
Q Consensus 305 ~~~~s~d~~~la~~~ 319 (321)
.++|++++.+|+++.
T Consensus 242 ~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 242 SLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEECSSSSEEEEEE
T ss_pred EEEEcCCCCEEEEEc
Confidence 678999999998764
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-30 Score=233.06 Aligned_cols=227 Identities=10% Similarity=0.097 Sum_probs=184.7
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|.+.|++++|+|||++|++|+.++ |+|||+.+......... |...+..+++.++++.+++++ .|++|+
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s-------~d~~i~ 80 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIVGS-------DDFRIR 80 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEEEE-------TTSEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCCEEEEEC-------CCCEEE
Confidence 346778999999999999999998865 88999999887666554 678899999999999999888 689999
Q ss_pred EEeCCCCcEEEEEeeC-CceeEEEEeCCe--EEEEE-CCEEEEEEcCCc-EEEEEEeccCCCCceEEEeeCCCceEEEee
Q 020784 160 IWDDHQSRCIGELSFR-SEVRSVKLRRDR--IIVVL-EQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~-~~~~~l~~~~~~~~~~~~s~~~d~~~la~s 234 (321)
+||+++++.+..+..+ ..|.+++|+++. ++.++ +++|++||++++ .+.+.+..|...+..+++++. ++.+++ +
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~-s 158 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK-DPSTFA-S 158 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT-CTTEEE-E
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC-CCCEEE-E
Confidence 9999999998888755 479999999864 55554 579999999876 666778888777666666653 345676 5
Q ss_pred cCCCCcEEEEeeCCcc-eEE-eeccccceeEEEECC--CCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee--EEE
Q 020784 235 GLQKGQVRVEHYASKR-TKF-IMAHDSRIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ--SGL 308 (321)
Q Consensus 235 Gs~dg~V~i~d~~~~~-~~~-l~~H~~~V~~vafsp--dg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~~ 308 (321)
|+.||.|++||+.... ... ..+|...|..++|+| ++.+||+||.|++ |+|||+++++++.++. +|...+ +.+
T Consensus 159 gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~-~h~~~v~~~~~ 236 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLE-GHMSNVSFAVF 236 (304)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEE-CCSSCEEEEEE
T ss_pred EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeC-CCCCCEEEEEE
Confidence 9999999999987543 333 446778999999986 7889999999999 9999999999999995 555443 477
Q ss_pred eecCceEEEee
Q 020784 309 WLSSAWLRVLR 319 (321)
Q Consensus 309 s~d~~~la~~~ 319 (321)
++++.+|+.+.
T Consensus 237 ~p~~~~l~s~s 247 (304)
T 2ynn_A 237 HPTLPIIISGS 247 (304)
T ss_dssp CSSSSEEEEEE
T ss_pred CCCCCEEEEEc
Confidence 78888888764
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-31 Score=246.22 Aligned_cols=226 Identities=12% Similarity=0.154 Sum_probs=190.2
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|..+|++++|+|++.+|++|+.|+ |+|||+.+++....... |.+.|..++++++++.+++++ .|++|+
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs-------~D~~i~ 175 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCS-------ADMTIK 175 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSCCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEEEe-------CCCeEE
Confidence 357889999999999999999999865 88999999887666554 688999999999999888888 689999
Q ss_pred EEeCCCCcEEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeec
Q 020784 160 IWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sG 235 (321)
|||+.+++++..+..+ ..|.+++|+++ .+++++ +++|++||+++++.++++..|...+..+ .+++++.+++ +|
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~--~~~~~g~~l~-s~ 252 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTLIA-SC 252 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE--EECTTSSEEE-EE
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEE--EECCCCCEEE-EE
Confidence 9999999988887654 47999999875 455554 5799999999999999999887665444 4555668888 59
Q ss_pred CCCCcEEEEeeCCcc-eEEeeccccceeEEEECCC--------------------CCEEEEEeCCCcEEEEEEcCCCcEE
Q 020784 236 LQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQD--------------------GQLLATSSTKGTLVRIFNTLDGTLL 294 (321)
Q Consensus 236 s~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspd--------------------g~~las~S~Dgt~IrIWd~~tg~~i 294 (321)
+.||.|++||+.... ...+.+|...|.+++|+|+ |.+|++|+.|++ |+|||+++++++
T Consensus 253 s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~~~ 331 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTGMCL 331 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTTEEE
T ss_pred cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCCceE
Confidence 999999999998765 5689999999999999996 679999999999 999999999999
Q ss_pred EEEeCCCcce--eEEEeecCceEEEee
Q 020784 295 QEECCPSISA--QSGLWLSSAWLRVLR 319 (321)
Q Consensus 295 ~~~~~g~~~~--~~~~s~d~~~la~~~ 319 (321)
.++. +|... .+.+++++++|+.+.
T Consensus 332 ~~~~-~h~~~v~~v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 332 MTLV-GHDNWVRGVLFHSGGKFILSCA 357 (410)
T ss_dssp EEEE-CCSSCEEEEEECSSSSCEEEEE
T ss_pred EEEE-CCCCcEEEEEEcCCCCEEEEEe
Confidence 9985 55544 347778899998764
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4e-31 Score=247.03 Aligned_cols=227 Identities=11% Similarity=0.171 Sum_probs=190.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+++|++|++|+.|+ |+|||+.+.+.+..... |.+.|..++++++++.+++++ .|++|++
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~V~~v~~~p~~~~l~s~s-------~D~~i~~ 218 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG-HDHNVSSVSIMPNGDHIVSAS-------RDKTIKM 218 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC-CSSCEEEEEECSSSSEEEEEE-------TTSEEEE
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC-CCCCEEEEEEeCCCCEEEEEe-------CCCeEEE
Confidence 56888999999999999999999865 88999988876555443 678899999999999988887 6899999
Q ss_pred EeCCCCcEEEEEeeCC-ceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCC---------
Q 020784 161 WDDHQSRCIGELSFRS-EVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG--------- 227 (321)
Q Consensus 161 WD~~~~~~~~~~~~~~-~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d--------- 227 (321)
||++++.++..+..+. .|.++.++++. +++++ ++.|++||+.+++....+..|...+..++++++..
T Consensus 219 wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATG 298 (410)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCS
T ss_pred EECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcc
Confidence 9999999988887654 68999998764 55554 57999999999999999988887777777776421
Q ss_pred ---------ceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 020784 228 ---------SLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEE 297 (321)
Q Consensus 228 ---------~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~ 297 (321)
+.+++ +|+.||.|++||+.++. +.++.+|...|++++|+|+|++|+||+.||+ |+|||+.+++++.++
T Consensus 299 ~~~~~~~~~g~~l~-sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~-i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 299 SETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKNKRCMKTL 376 (410)
T ss_dssp CC-------CCEEE-EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTTSCCCEEE
T ss_pred ccccccCCCCCEEE-EEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCceEEEE
Confidence 45677 59999999999998765 6789999999999999999999999999999 999999999999998
Q ss_pred eCCCccee--EEEeecCceEEEee
Q 020784 298 CCPSISAQ--SGLWLSSAWLRVLR 319 (321)
Q Consensus 298 ~~g~~~~~--~~~s~d~~~la~~~ 319 (321)
. +|...+ +.+++++.+|+.+.
T Consensus 377 ~-~h~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 377 N-AHEHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp E-CCSSCEEEEEECSSSSCEEEEE
T ss_pred c-CCCCcEEEEEEcCCCCEEEEEe
Confidence 5 555444 46778888998764
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-30 Score=235.04 Aligned_cols=227 Identities=14% Similarity=0.171 Sum_probs=183.7
Q ss_pred cCCCCCCeEEEEEcCC----CCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCC
Q 020784 81 SSSPPPTLLHISFNQD----HGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~d----g~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~ 154 (321)
...|.+.|++|+|+++ +++|++|+.|+ |+||++...+......+. |...|..+++.++...+++++ .
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s-------~ 100 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS-------L 100 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE-------T
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe-------C
Confidence 3578999999999975 67899998755 889999877654443332 677899999999888888877 6
Q ss_pred CCcEEEEeCCCCcEEEEEeeC-CceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceE
Q 020784 155 LNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
|++|++||+.+++.+..+..+ ..+.+++|+++. ++++. ++.|++||+.+++....+..+...+..+++ .+++.+
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~--spdg~~ 178 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY--SPDGKY 178 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE--CTTSSE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE--CCCCCE
Confidence 899999999999988887654 478889999864 44443 479999999999988888877655444555 556688
Q ss_pred EEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee--EE
Q 020784 231 LVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ--SG 307 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~ 307 (321)
|| +|+.||.|++||+.++. +.++.+|...|++++|+|+|++||+|+.||+ |+|||+++++++.++. +|...+ +.
T Consensus 179 la-sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~-~h~~~v~~~~ 255 (321)
T 3ow8_A 179 LA-SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTLS-GHASWVLNVA 255 (321)
T ss_dssp EE-EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEEC-CCSSCEEEEE
T ss_pred EE-EEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEEc-CCCCceEEEE
Confidence 88 59999999999998765 5689999999999999999999999999999 9999999999999884 565443 47
Q ss_pred EeecCceEEEee
Q 020784 308 LWLSSAWLRVLR 319 (321)
Q Consensus 308 ~s~d~~~la~~~ 319 (321)
+++++++|+.+.
T Consensus 256 ~sp~~~~l~s~s 267 (321)
T 3ow8_A 256 FCPDDTHFVSSS 267 (321)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEe
Confidence 778899998764
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.3e-30 Score=233.94 Aligned_cols=229 Identities=11% Similarity=0.081 Sum_probs=188.8
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|...|+|++|+|||++||+|+.|+ |+|||..+.+....... |...+..++++++++.+++++ .|++++
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~~v~~~~~sp~g~~lasg~-------~d~~i~ 131 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCTWVMACAYAPSGCAIACGG-------LDNKCS 131 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCEEEECTTSSEEEEES-------TTSEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-CCCCEEEEEECCCCCEEEEee-------CCCCEE
Confidence 357889999999999999999999866 88999988877666555 567889999999999988877 679999
Q ss_pred EEeCCCC------cEEEEEe-eCCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCce
Q 020784 160 IWDDHQS------RCIGELS-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (321)
Q Consensus 160 iWD~~~~------~~~~~~~-~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~ 229 (321)
+|++... .....+. +...|.++.|+++ .++.++ +++|++||+.+++.++++.+|...+..+++++++++.
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 9998643 1223333 4457899999875 455554 5799999999999999999998887788888877777
Q ss_pred EEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCc---cee
Q 020784 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSI---SAQ 305 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~---~~~ 305 (321)
+++ +|+.||.|++||+.++. +..+.+|...|++++|+|+|.+||+|+.|++ |||||+++++.+..+..... ...
T Consensus 212 ~l~-sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 212 TFV-SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESIIFGASS 289 (354)
T ss_dssp EEE-EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred EEE-EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCcccceeE
Confidence 887 59999999999998765 5689999999999999999999999999999 99999999998887753322 234
Q ss_pred EEEeecCceEEEee
Q 020784 306 SGLWLSSAWLRVLR 319 (321)
Q Consensus 306 ~~~s~d~~~la~~~ 319 (321)
+.+++++++|+++.
T Consensus 290 ~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 290 VDFSLSGRLLFAGY 303 (354)
T ss_dssp EEECTTSSEEEEEE
T ss_pred EEEeCCCCEEEEEE
Confidence 57888999998764
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.98 E-value=7.3e-31 Score=240.99 Aligned_cols=227 Identities=13% Similarity=0.141 Sum_probs=173.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeee---ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDF---ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v 158 (321)
..|...|++++|+||+++|+++.++.|+|||+.+.+......+ .|.+.|..++++++++.+++++ .|++|
T Consensus 91 ~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs-------~dg~v 163 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG-------KDFSV 163 (357)
T ss_dssp EECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE-------TTSCE
T ss_pred CCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe-------CCCeE
Confidence 3567789999999999988877778899999987654322221 2678899999999999998887 67999
Q ss_pred EEEeCCCCcEEEEEeeC-CceeEEEEeCC---eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCC-ceEEE
Q 020784 159 MIWDDHQSRCIGELSFR-SEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG-SLVLV 232 (321)
Q Consensus 159 ~iWD~~~~~~~~~~~~~-~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d-~~~la 232 (321)
+|||+++++.+..+..+ ..|.+++|+++ .++.+. ++.|++||+++++.+..+........+.++.+.++ +.+++
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEE
Confidence 99999999998888754 57999999864 344454 57999999998887776655444444445554444 35666
Q ss_pred eecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCC-CEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeE--EE
Q 020784 233 CPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQS--GL 308 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg-~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~--~~ 308 (321)
+|+.||.|++||+.+.. +.++.+|...|++|+|+|++ ++|||||.|++ |||||++++++++.+ +|...+. +|
T Consensus 244 -~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~--~H~~~V~~vaf 319 (357)
T 4g56_B 244 -CGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDL--SHRDFVTGVAW 319 (357)
T ss_dssp -EEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEEC--CCSSCEEEEEE
T ss_pred -EeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEEC--CCCCCEEEEEE
Confidence 59999999999998755 67899999999999999987 68999999999 999999999998765 5665544 55
Q ss_pred ee-cCceEEEee
Q 020784 309 WL-SSAWLRVLR 319 (321)
Q Consensus 309 s~-d~~~la~~~ 319 (321)
++ |+++|+.+.
T Consensus 320 sP~d~~~l~s~s 331 (357)
T 4g56_B 320 SPLDHSKFTTVG 331 (357)
T ss_dssp CSSSTTEEEEEE
T ss_pred eCCCCCEEEEEc
Confidence 65 688998764
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=2.7e-30 Score=236.35 Aligned_cols=201 Identities=8% Similarity=-0.010 Sum_probs=163.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCC-eEEEEeCCCCCCCCCCcEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~sg~~~~~~~d~~v~ 159 (321)
..|.+.|++|+|+|||++|++|+.++ |+|||+.+++.+..... |.+.|..+++++++. .+++++ .|++|+
T Consensus 124 ~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s-------~D~~v~ 195 (344)
T 4gqb_B 124 YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKDSVFLSCS-------EDNRIL 195 (344)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCTTEEEEEE-------TTSCEE
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCCCceeeec-------cccccc
Confidence 46888999999999999999999865 89999999887766654 788999999988875 456666 679999
Q ss_pred EEeCCCCcEEEEEeeC---CceeEEEEeCC---eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEE
Q 020784 160 IWDDHQSRCIGELSFR---SEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~---~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la 232 (321)
|||+++++....+... ..+.+++|+++ .++++. ++.|++||++++++++++..|...+..++|++++. .+||
T Consensus 196 iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~-~~la 274 (344)
T 4gqb_B 196 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSV-PFLA 274 (344)
T ss_dssp EEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSS-CCEE
T ss_pred cccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC-eEEE
Confidence 9999999988776533 35889999864 344444 57999999999999999999988777777776532 4566
Q ss_pred eecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCC-EEEEEeCCCcEEEEEEcCCCcE
Q 020784 233 CPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~-~las~S~Dgt~IrIWd~~tg~~ 293 (321)
+|+.||+|+|||..++.+..+.+|.+.|++|+|+|+|+ +|||||.||+ |++|++.+..+
T Consensus 275 -sgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~-v~~w~v~~~~~ 334 (344)
T 4gqb_B 275 -SLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ-VVHHVVPTEPL 334 (344)
T ss_dssp -EEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSC-EEEEECCC---
T ss_pred -EEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe-EEEEECCCCCC
Confidence 69999999999999988888999999999999999986 6789999999 99999988654
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=4.4e-29 Score=222.97 Aligned_cols=229 Identities=17% Similarity=0.130 Sum_probs=171.1
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCC--ceeEEeeeecCCceEEEEEecC--CCeEEEEeCCCCCCCCC
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPF--REIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQYPL 155 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~--~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~sg~~~~~~~d 155 (321)
...|...|++++|++||++||+|+.|+ |+|||+... +....... |.+.|..+++.++ ++.+++++ .|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s-------~D 76 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS-------YD 76 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEE-------TT
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCCEEEEEc-------CC
Confidence 356888999999999999999999755 899999743 33334433 7888999998753 67888877 68
Q ss_pred CcEEEEeCCCCc--EEEEEe-eCCceeEEEEeCC----eEEEEE-CCEEEEEEcCCcE--EEEEEeccCCCCceEEEeeC
Q 020784 156 NKVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQG 225 (321)
Q Consensus 156 ~~v~iWD~~~~~--~~~~~~-~~~~v~~v~~~~~----~~~~~~-~~~I~iwd~~~~~--~~~~l~~~~~~~~~~~~s~~ 225 (321)
++|+|||+++++ .+..+. +...|.+++|+++ .+++++ ++.|++||+++.. ....+..|...+..++++++
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 999999998874 344444 3457999999874 455555 5799999997653 23456677666666666664
Q ss_pred C-----------CceEEEeecCCCCcEEEEeeCCcc-----eEEeeccccceeEEEECCCC---CEEEEEeCCCcEEEEE
Q 020784 226 V-----------GSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQDG---QLLATSSTKGTLVRIF 286 (321)
Q Consensus 226 ~-----------d~~~la~sGs~dg~V~i~d~~~~~-----~~~l~~H~~~V~~vafspdg---~~las~S~Dgt~IrIW 286 (321)
. ++.+|| +|+.||+|++||+.... ..++.+|...|++|+|+|++ .+|||||.|++ |+||
T Consensus 157 ~~~~~~~~~~~~~~~~l~-sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v~iW 234 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CIIW 234 (297)
T ss_dssp C------------CCEEE-EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEE
T ss_pred cccccccCCCCCCcceEE-EEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-EEEE
Confidence 2 235777 59999999999987543 35788999999999999995 89999999999 9999
Q ss_pred EcCCCc--EEEEEe--CCCcc--eeEEEeecCceEEEee
Q 020784 287 NTLDGT--LLQEEC--CPSIS--AQSGLWLSSAWLRVLR 319 (321)
Q Consensus 287 d~~tg~--~i~~~~--~g~~~--~~~~~s~d~~~la~~~ 319 (321)
|+++++ ...... .++.. ..+.++++|++||.+.
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 998753 222221 23333 3457788999998864
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=1.8e-29 Score=247.54 Aligned_cols=210 Identities=16% Similarity=0.205 Sum_probs=167.0
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 80 TSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 80 ~~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
....|...|++++|+|||++||+|+.++ |+|||+.+.+......+. |.+.|..++|++++..+++++.+.+ ..++
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~---~~~~ 130 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE---RFGH 130 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS---CSEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC---ceeE
Confidence 3457888999999999999999999865 889999765433222222 6789999999999999988875422 2357
Q ss_pred EEEEeCCCCcEEEEEeeC-CceeEEEEeCCe---EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEE
Q 020784 158 VMIWDDHQSRCIGELSFR-SEVRSVKLRRDR---IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~~---~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la 232 (321)
|++||. ++....+..+ ..|.+++|+++. ++.++ +++|++||..++++++++.+|...+..++|++ |+.+||
T Consensus 131 v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp--dg~~la 206 (611)
T 1nr0_A 131 VFLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP--DGSLFA 206 (611)
T ss_dssp EEETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECT--TSSEEE
T ss_pred EEEeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECC--CCCEEE
Confidence 888884 4444455444 479999999863 55555 46999999999999999998887766666665 557888
Q ss_pred eecCCCCcEEEEeeCCcc-eEEee-------ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 233 CPGLQKGQVRVEHYASKR-TKFIM-------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~-~~~l~-------~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
+|+.||+|++||...+. +..+. +|.+.|++++|+|+|++|||||.|++ |||||+.+++++.++.
T Consensus 207 -s~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~-v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 207 -STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-IKIWNVATLKVEKTIP 278 (611)
T ss_dssp -EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEE
T ss_pred -EEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe-EEEEeCCCCceeeeec
Confidence 59999999999987654 44563 79999999999999999999999999 9999999999887664
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=8.1e-29 Score=229.93 Aligned_cols=220 Identities=15% Similarity=0.157 Sum_probs=178.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 87 TLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
.|++++|+|||++||+|+.++ |+|||+.+.+....... |.+.|..++++++++.+++++ .|++|++||+++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s-------~d~~v~iwd~~~ 196 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGS-------GDRTVRIWDLRT 196 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEEEEETTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEec-------CCCcEEEEECCC
Confidence 599999999999999998865 88999998877655554 678899999999999998887 679999999999
Q ss_pred CcEEEEEeeCCceeEEEEeC-C--eEEEEE-CCEEEEEEcCCcEEEEEEe-------ccCCCCceEEEeeCCCceEEEee
Q 020784 166 SRCIGELSFRSEVRSVKLRR-D--RIIVVL-EQKIFVYNFADLKLLHQIE-------TIANPKGLCAVSQGVGSLVLVCP 234 (321)
Q Consensus 166 ~~~~~~~~~~~~v~~v~~~~-~--~~~~~~-~~~I~iwd~~~~~~~~~l~-------~~~~~~~~~~~s~~~d~~~la~s 234 (321)
+++...+.....+.++.+++ + .+++++ ++.|++||+++++.+..+. +|... +.++.+.+++.+|+ +
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~--v~~v~~~~~g~~l~-s 273 (393)
T 1erj_A 197 GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS--VYSVVFTRDGQSVV-S 273 (393)
T ss_dssp TEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC--EEEEEECTTSSEEE-E
T ss_pred CeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC--EEEEEECCCCCEEE-E
Confidence 99988888888999999987 3 455554 5799999999998888773 34444 44455555668887 5
Q ss_pred cCCCCcEEEEeeCCc-------------ceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC
Q 020784 235 GLQKGQVRVEHYASK-------------RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS 301 (321)
Q Consensus 235 Gs~dg~V~i~d~~~~-------------~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~ 301 (321)
|+.||.|++||+... ....+.+|...|.+++|+|++.+|++||.||+ |+|||+++++++.++. +|
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~iwd~~~~~~~~~l~-~h 351 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKSGNPLLMLQ-GH 351 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTTCCEEEEEE-CC
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-EEEEECCCCeEEEEEC-CC
Confidence 999999999998642 23478899999999999999999999999999 9999999999999885 66
Q ss_pred cceeEEEe--e------cCceEEEee
Q 020784 302 ISAQSGLW--L------SSAWLRVLR 319 (321)
Q Consensus 302 ~~~~~~~s--~------d~~~la~~~ 319 (321)
...+.++. + ++.+|+.+.
T Consensus 352 ~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 352 RNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp SSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 66555443 2 567787754
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=1.2e-28 Score=224.52 Aligned_cols=227 Identities=14% Similarity=0.060 Sum_probs=176.3
Q ss_pred cCCCCCCeEEEEE-----cC-CCCEEEEEcCCc-EEEEEecCCc-------eeEEeeeecCCceEEEEEecCCCeEEEEe
Q 020784 81 SSSPPPTLLHISF-----NQ-DHGCFAAGTDHG-FRIYNCDPFR-------EIFRRDFERGGGIGVVEMLFRCNILALVG 146 (321)
Q Consensus 81 ~~~~~~~V~~v~f-----s~-dg~~lasg~~~g-v~vw~~~~~~-------~~~~~~~~~~~~v~~v~~~~~~~~~~~~s 146 (321)
...|...|++++| ++ ||++|++|+.|+ |+|||+...+ ....... |.+.|..+++++++..+++++
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~~l~s~s 95 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENCFAISSS 95 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTTEEEEEE
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCCEEEEEc
Confidence 3578889999999 76 999999999855 8999987532 1112222 678899999999999888877
Q ss_pred CCCCCCCCCCcEEEEeCCCCcEEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEe---ccCCCCce
Q 020784 147 GGPDPQYPLNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIE---TIANPKGL 219 (321)
Q Consensus 147 g~~~~~~~d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~---~~~~~~~~ 219 (321)
.|++|++||+++++.+..+..+ ..|.+++|+++ .+++++ +++|++||+..... ..+. .|...+..
T Consensus 96 -------~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 96 -------WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK-FSSAEKENHSDWVSC 167 (343)
T ss_dssp -------TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EECCTTTSCSSCEEE
T ss_pred -------CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce-eeeecccCCCceeee
Confidence 6899999999999988888754 58999999976 455554 57999999985433 3332 34444455
Q ss_pred EEEeeCCC--------ceEEEeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEc-CC
Q 020784 220 CAVSQGVG--------SLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNT-LD 290 (321)
Q Consensus 220 ~~~s~~~d--------~~~la~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~-~t 290 (321)
++++++.. +.+++ +|+.||.|++||........+.+|...|++++|+|+|++||+|+.||+ |+|||+ ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~~~ 245 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFA-SVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDILNL 245 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEE-EEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESSCC
T ss_pred eeeccccccccccCCCCCEEE-EEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECCCC
Confidence 55555431 25676 599999999999766667789999999999999999999999999999 999999 45
Q ss_pred CcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 291 GTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 291 g~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
+.....+..++....++|++++++|+++
T Consensus 246 ~~~~~~~~~~~~v~~v~~sp~~~~la~~ 273 (343)
T 2xzm_R 246 TYPQREFDAGSTINQIAFNPKLQWVAVG 273 (343)
T ss_dssp SSCSEEEECSSCEEEEEECSSSCEEEEE
T ss_pred cccceeecCCCcEEEEEECCCCCEEEEE
Confidence 5566666566666667889999998875
No 18
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=8.9e-29 Score=227.82 Aligned_cols=181 Identities=12% Similarity=0.054 Sum_probs=144.5
Q ss_pred eEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCCe--EEEEECCEEEEEEcCCcEEE
Q 020784 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR--IIVVLEQKIFVYNFADLKLL 207 (321)
Q Consensus 130 v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~I~iwd~~~~~~~ 207 (321)
+.+++++++++.+++++++ .|++|+|||+++++.+..+.++..|.+++|+++. ++.++++.+++|+..+++.+
T Consensus 136 ~~~v~fSpDg~~la~as~~-----~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSK-----VPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCI 210 (365)
T ss_dssp EEEEEECTTSSCEEEEESC-----SSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEE
T ss_pred EEEEEEcCCCCEEEEEECC-----CCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcce
Confidence 5678889999999988876 5799999999999999999988899999999864 55566788999998877765
Q ss_pred EEEe--ccCCCCceEEEeeCCCceEEEeecCCCC----cEEEEeeCCcc-----eEEeeccccceeEEEECCCCCEEEEE
Q 020784 208 HQIE--TIANPKGLCAVSQGVGSLVLVCPGLQKG----QVRVEHYASKR-----TKFIMAHDSRIACFALTQDGQLLATS 276 (321)
Q Consensus 208 ~~l~--~~~~~~~~~~~s~~~d~~~la~sGs~dg----~V~i~d~~~~~-----~~~l~~H~~~V~~vafspdg~~las~ 276 (321)
.... .|...+..++|++ ++..+++ ++.|+ .+++|+..... ...+.+|...|++|+|||||++||+|
T Consensus 211 ~~~~~~~~~~~v~~v~fsp--dg~~l~~-~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIA--DDTVLIA-ASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp EEECCCCTTEEEEEEEEEE--TTEEEEE-EEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred eeeecCCCCCCEEEEEEcC--CCCEEEE-EecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 5443 2434445566666 4577774 55555 45668876533 23678899999999999999999999
Q ss_pred eCCCcEEEEEEcCCCcEEEEEeCCCccee--EEEeecCceEEEee
Q 020784 277 STKGTLVRIFNTLDGTLLQEECCPSISAQ--SGLWLSSAWLRVLR 319 (321)
Q Consensus 277 S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~~s~d~~~la~~~ 319 (321)
+.|++ |+|||++++++++++..+|...+ ++|++||++||.++
T Consensus 288 s~D~~-V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S 331 (365)
T 4h5i_A 288 SNDNS-IALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVS 331 (365)
T ss_dssp ETTSC-EEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEE
T ss_pred cCCCE-EEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEe
Confidence 99999 99999999999999877887654 48889999999875
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=223.42 Aligned_cols=230 Identities=11% Similarity=0.124 Sum_probs=189.5
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcE
Q 020784 80 TSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 80 ~~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v 158 (321)
....|...|++++|+|||++|++|+.++ |+|||+.+.+....... |.+.+..++++++++.+++++ .|++|
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~-------~dg~i 98 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTKYCVTGS-------ADYSI 98 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTTEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCCEEEEEe-------CCCeE
Confidence 3467889999999999999999998765 88999998887666554 688899999999999998887 67999
Q ss_pred EEEeCCCCcEEEEEeeCCceeEEEEeCCe--EEEEE-C-----CEEEEEEcCCcE-----------EEEEEeccCCCCce
Q 020784 159 MIWDDHQSRCIGELSFRSEVRSVKLRRDR--IIVVL-E-----QKIFVYNFADLK-----------LLHQIETIANPKGL 219 (321)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~-~-----~~I~iwd~~~~~-----------~~~~l~~~~~~~~~ 219 (321)
++||+.+++.+..+.+...|.++.|+++. ++++. + +.|++||+...+ .+..+..+.....+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 99999999999999988899999998753 44444 3 799999986542 23344444442245
Q ss_pred EEEeeCCCceEEEeecCCCCcEEEEeeCC--cceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 020784 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEE 297 (321)
Q Consensus 220 ~~~s~~~d~~~la~sGs~dg~V~i~d~~~--~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~ 297 (321)
.++...+++.++++ |+.||.|++||+.. ..+..+..|...|.+++|+|++.+|++++.||. |+|||+++++++..+
T Consensus 179 ~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 179 TVAGWSTKGKYIIA-GHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN-SFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEECGGGCEEEE-EETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred eEEEEcCCCCEEEE-EcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce-EEEEECCCCceeeee
Confidence 55555666678874 89999999999986 346688999999999999999999999999999 999999999999999
Q ss_pred eCCCcceeEEEeecCceEEEee
Q 020784 298 CCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 298 ~~g~~~~~~~~s~d~~~la~~~ 319 (321)
........+.+++++++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 257 ETDCPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp ECSSCEEEEEECSSSSEEEEEE
T ss_pred cCCCCceeEEecCCCceEEEee
Confidence 8666666778899999998764
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=4.9e-30 Score=237.10 Aligned_cols=228 Identities=13% Similarity=0.137 Sum_probs=178.8
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|.+.|++++|+|||++|++|+.|+ |+|||..+.+....... |...+..++++++++.+++++ .|+.|+
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~s~~g~~las~~-------~d~~v~ 133 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAFAPNGQSVACGG-------LDSACS 133 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEECTTSSEEEECC-------SSSCCE
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEECCCCCEEEEee-------CCCcEE
Confidence 467899999999999999999999866 88999999887766665 678899999999999887766 679999
Q ss_pred EEeCCCCc-------EEEEEe-eCCceeEEEEeCC---eEEEEE-CCEEEEEEcCCcEEEEEEe-----ccCCCCceEEE
Q 020784 160 IWDDHQSR-------CIGELS-FRSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIE-----TIANPKGLCAV 222 (321)
Q Consensus 160 iWD~~~~~-------~~~~~~-~~~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l~-----~~~~~~~~~~~ 222 (321)
|||+.+.. ....+. +...|.++.|.++ .++.++ |++|++||+.+++.+..+. +|...+..+++
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 99986532 122233 3346788888763 355554 5799999999999888873 34443334444
Q ss_pred eeCCCceEEEeecCCCCcEEEEeeCC--cceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 223 SQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 223 s~~~d~~~la~sGs~dg~V~i~d~~~--~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
++ .++.+++ +|+.||.|++||+.. ..+.++.+|.+.|++|+|+|+|.+|||||.||+ |||||+++++++..+...
T Consensus 214 ~~-~~~~~l~-sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 214 NS-LNANMFI-SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp CS-SSCCEEE-EEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETTTTEEEEEECCC
T ss_pred ec-CCCCEEE-EEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECCCCcEEEEeccc
Confidence 33 2456777 599999999999863 446789999999999999999999999999999 999999999999888643
Q ss_pred Cc--------ceeEEEeecCceEEEee
Q 020784 301 SI--------SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 301 ~~--------~~~~~~s~d~~~la~~~ 319 (321)
.. ...++|+++|++|+++.
T Consensus 291 ~~~~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp CSSSCCSSCSCSEEEECSSSSEEEEEC
T ss_pred ccccccccCceEEEEECCCCCEEEEEE
Confidence 22 23458889999998753
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=9.6e-29 Score=225.51 Aligned_cols=227 Identities=15% Similarity=0.151 Sum_probs=173.4
Q ss_pred CCCCC-CeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeee--ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 82 SSPPP-TLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDF--ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 82 ~~~~~-~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
..|.. .|++++|+|||++||+|+.|+ |+|||++.......... .|.+.|..++++++++.+++++ .|++
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s-------~D~~ 84 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS-------FDAT 84 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE-------CCCc
Confidence 35655 899999999999999998755 89999988764332221 2678899999999999999888 6899
Q ss_pred EEEEeCCCCc--EEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCc---EEEEEEeccCCCCceEEEeeCCCc
Q 020784 158 VMIWDDHQSR--CIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADL---KLLHQIETIANPKGLCAVSQGVGS 228 (321)
Q Consensus 158 v~iWD~~~~~--~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~---~~~~~l~~~~~~~~~~~~s~~~d~ 228 (321)
|+|||...+. ++..+..+ ..|.+++|+++ .++.++ ++.|++||+..+ +.+..+..|...+..+++++ ++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p--~~ 162 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP--SQ 162 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS--SS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC--CC
Confidence 9999988764 45566544 58999999975 455554 579999999764 45666777766655555555 55
Q ss_pred eEEEeecCCCCcEEEEeeCCcc---eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCC---------------
Q 020784 229 LVLVCPGLQKGQVRVEHYASKR---TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD--------------- 290 (321)
Q Consensus 229 ~~la~sGs~dg~V~i~d~~~~~---~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~t--------------- 290 (321)
.+|+ +|+.||.|++|+..... ..++.+|...|++|+|+|+|++||+||.|++ |||||+..
T Consensus 163 ~~l~-s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~~ 240 (345)
T 3fm0_A 163 ELLA-SASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDPS 240 (345)
T ss_dssp SCEE-EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---CE
T ss_pred CEEE-EEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCCc
Confidence 7777 59999999999987653 3578999999999999999999999999999 99999732
Q ss_pred CcEEEEEeCCCccee--EEEeecCceEEEee
Q 020784 291 GTLLQEECCPSISAQ--SGLWLSSAWLRVLR 319 (321)
Q Consensus 291 g~~i~~~~~g~~~~~--~~~s~d~~~la~~~ 319 (321)
.+++.++...|...+ +.+++++.+|+.+.
T Consensus 241 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 271 (345)
T 3fm0_A 241 WKCICTLSGFHSRTIYDIAWCQLTGALATAC 271 (345)
T ss_dssp EEEEEEECSSCSSCEEEEEECTTTCCEEEEE
T ss_pred cceeEEecCCCCCcEEEEEEecCCCEEEEEe
Confidence 245556643344433 46677778887653
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.8e-28 Score=223.20 Aligned_cols=225 Identities=10% Similarity=0.086 Sum_probs=177.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCce--eEEeee-ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE--IFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~--~~~~~~-~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
..|...|.+++|+|+|++|++|+.++ ++||++.+... .....+ .|.+.+.++.+..++. +++++ .|++
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s-------~d~~ 165 (340)
T 1got_B 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSS-------GDTT 165 (340)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEE-------TTSC
T ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEE-------CCCc
Confidence 45677899999999999999998866 77999976531 112222 1677888888876654 55655 5799
Q ss_pred EEEEeCCCCcEEEEEeeC-CceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 158 VMIWDDHQSRCIGELSFR-SEVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
|++||+++++.+..+..+ ..|.+++|+++. ++++. ++.|++||+++++.+.++..|...+..+++++ ++.+++
T Consensus 166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p--~~~~l~- 242 (340)
T 1got_B 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP--NGNAFA- 242 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT--TSSEEE-
T ss_pred EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC--CCCEEE-
Confidence 999999999988888754 589999999864 44444 57999999999999999998877666666655 557887
Q ss_pred ecCCCCcEEEEeeCCcc-eEEee--ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee--EEE
Q 020784 234 PGLQKGQVRVEHYASKR-TKFIM--AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ--SGL 308 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~-~~~l~--~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~~ 308 (321)
+|+.||.|++||+.... +..+. .+...|++++|+|+|++|++|+.||+ |+|||+.+++++.++. +|...+ +.+
T Consensus 243 s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~~~-~h~~~v~~~~~ 320 (340)
T 1got_B 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLA-GHDNRVSCLGV 320 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE-CCSSCEEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEeeEee-cCCCcEEEEEE
Confidence 59999999999998755 33443 23457999999999999999999999 9999999999999885 666544 477
Q ss_pred eecCceEEEee
Q 020784 309 WLSSAWLRVLR 319 (321)
Q Consensus 309 s~d~~~la~~~ 319 (321)
+++|++||.+.
T Consensus 321 s~dg~~l~s~s 331 (340)
T 1got_B 321 TDDGMAVATGS 331 (340)
T ss_dssp CTTSSCEEEEE
T ss_pred cCCCCEEEEEc
Confidence 78899998864
No 23
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=4.7e-29 Score=224.87 Aligned_cols=228 Identities=16% Similarity=0.121 Sum_probs=167.1
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEec--CCCeEEEEeCCCCCCCCCC
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLF--RCNILALVGGGPDPQYPLN 156 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~--~~~~~~~~sg~~~~~~~d~ 156 (321)
...|...|++++|++||++||+|+.|+ |+|||+.+.+......+. |.+.|..+++.+ +++.+++++ .|+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s-------~D~ 81 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS-------YDR 81 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE-------TTS
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE-------CCC
Confidence 457888999999999999999999865 889999887543222222 788999999975 378888887 689
Q ss_pred cEEEEeCCCCc--EEEEEe-eCCceeEEEEeCC----eEEEEE-CCEEEEEEcCCcE---EEEEEeccCCCCceEEEeeC
Q 020784 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLK---LLHQIETIANPKGLCAVSQG 225 (321)
Q Consensus 157 ~v~iWD~~~~~--~~~~~~-~~~~v~~v~~~~~----~~~~~~-~~~I~iwd~~~~~---~~~~l~~~~~~~~~~~~s~~ 225 (321)
+|+|||++++. .+..+. +...|.+++|+++ .++++. ++.|++||++... ....+..|...+..++++++
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 99999999874 444554 3458999999875 345444 5799999997653 23334456556666676664
Q ss_pred C---------------CceEEEeecCCCCcEEEEeeCCc----ceEEeeccccceeEEEECCCC----CEEEEEeCCCcE
Q 020784 226 V---------------GSLVLVCPGLQKGQVRVEHYASK----RTKFIMAHDSRIACFALTQDG----QLLATSSTKGTL 282 (321)
Q Consensus 226 ~---------------d~~~la~sGs~dg~V~i~d~~~~----~~~~l~~H~~~V~~vafspdg----~~las~S~Dgt~ 282 (321)
. ++.+|+ +|+.||.|++||.... .+..+.+|...|++|+|+|++ .+|||||.||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~-sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~- 239 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFA-SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR- 239 (316)
T ss_dssp CCC------CCSCCCCCCCBEE-CCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE-
T ss_pred cCCccccccccccCccccceEE-EecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe-
Confidence 2 134666 6999999999998743 355789999999999999987 89999999999
Q ss_pred EEEEEcCCC-------cEEEEEeCCCcceeEEEeecCceEEEee
Q 020784 283 VRIFNTLDG-------TLLQEECCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 283 IrIWd~~tg-------~~i~~~~~g~~~~~~~~s~d~~~la~~~ 319 (321)
|+|||+.++ +.+..+ ......+.+++++++||++.
T Consensus 240 v~iw~~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 240 VFIWTCDDASSNTWSPKLLHKF--NDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp EEEEECSSTTCCCCBCCEEEEC--SSCEEEEEECTTTCCEEEEE
T ss_pred EEEEEccCccccchhhhhhhcC--CCcEEEEEEcCCCCEEEEEc
Confidence 999999873 233222 22334557889999998864
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=4.6e-28 Score=224.82 Aligned_cols=225 Identities=14% Similarity=0.136 Sum_probs=174.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeee-----------------cCCceEEEEEecCCCeEEEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-----------------RGGGIGVVEMLFRCNILALV 145 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~-----------------~~~~v~~v~~~~~~~~~~~~ 145 (321)
.|...|+|++|+|||++||+|+++.++||++.+++.+...... +...|..++++++++.++++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 4788999999999999999999889999999888765444320 01137889999999999888
Q ss_pred eCCCCCCCCCCcEEEEeCCCCcEEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEE
Q 020784 146 GGGPDPQYPLNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCA 221 (321)
Q Consensus 146 sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~ 221 (321)
+ .|++|+|||+.+++.+..+..+ ..|.+++|+++ .++.++ +++|++||+++++....+..+ ..+..++
T Consensus 142 ~-------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~~v~~~~ 213 (393)
T 1erj_A 142 A-------EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE-DGVTTVA 213 (393)
T ss_dssp E-------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred c-------CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC-CCcEEEE
Confidence 7 6799999999999988887754 57999999875 455554 579999999999988887643 3334445
Q ss_pred EeeCCCceEEEeecCCCCcEEEEeeCCcce-EEe-------eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCC--
Q 020784 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFI-------MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG-- 291 (321)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~V~i~d~~~~~~-~~l-------~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg-- 291 (321)
+++. ++.+++ +|+.||.|++||..++.. ..+ .+|...|++++|+|+|++||+|+.||+ |+|||++++
T Consensus 214 ~~~~-~~~~l~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~~~ 290 (393)
T 1erj_A 214 VSPG-DGKYIA-AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNANN 290 (393)
T ss_dssp ECST-TCCEEE-EEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC-----
T ss_pred EECC-CCCEEE-EEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCCCC
Confidence 5442 557777 599999999999887653 344 579999999999999999999999999 999999864
Q ss_pred ----------cEEEEEeCCCccee--EEEeecCceEEEee
Q 020784 292 ----------TLLQEECCPSISAQ--SGLWLSSAWLRVLR 319 (321)
Q Consensus 292 ----------~~i~~~~~g~~~~~--~~~s~d~~~la~~~ 319 (321)
.+..++ .+|...+ +.+++++++|+.+.
T Consensus 291 ~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs 329 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTY-IGHKDFVLSVATTQNDEYILSGS 329 (393)
T ss_dssp ----------CEEEEE-ECCSSCEEEEEECGGGCEEEEEE
T ss_pred cccccCCCCCcceEEE-ecccCcEEEEEECCCCCEEEEEe
Confidence 445555 3555444 46677889988754
No 25
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=6.9e-28 Score=217.46 Aligned_cols=223 Identities=10% Similarity=0.111 Sum_probs=178.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|++||++|++|+.|+ |+|||+.+++....... |.+.|..+++.+++..+++++ .|++|++
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s-------~D~~i~v 133 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKASMIISGS-------RDKTIKV 133 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSCEEEEEE-------TTSCEEE
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCCEEEEEe-------CCCeEEE
Confidence 46888999999999999999998755 88999999887655554 788999999999999888887 6899999
Q ss_pred EeCCCCcEEEEEe-eCCceeEEEEeCC--------eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceE
Q 020784 161 WDDHQSRCIGELS-FRSEVRSVKLRRD--------RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 161 WD~~~~~~~~~~~-~~~~v~~v~~~~~--------~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
||++.. ++..+. +...|.++.+.+. .++.+. ++.|++||+++++....+.+|...+..+++++ ++.+
T Consensus 134 wd~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp--~g~~ 210 (319)
T 3frx_A 134 WTIKGQ-CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP--DGTL 210 (319)
T ss_dssp EETTSC-EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT--TSSE
T ss_pred EECCCC-eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC--CCCE
Confidence 999754 444444 4457899998764 344444 56999999999999999988877666666655 5688
Q ss_pred EEeecCCCCcEEEEeeCCcce-EEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC-------c
Q 020784 231 LVCPGLQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS-------I 302 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~~~~~-~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~-------~ 302 (321)
|+ +|+.||.|++||+..+.. .++. +...|.+++|+|+|.+||+++ ++. |+||++..+.++..++... .
T Consensus 211 l~-s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~la~~~-~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~ 286 (319)
T 3frx_A 211 IA-SAGKDGEIMLWNLAAKKAMYTLS-AQDEVFSLAFSPNRYWLAAAT-ATG-IKVFSLDPQYLVDDLRPEFAGYSKAAE 286 (319)
T ss_dssp EE-EEETTCEEEEEETTTTEEEEEEE-CCSCEEEEEECSSSSEEEEEE-TTE-EEEEEETTEEEEEEECCCCTTCCGGGC
T ss_pred EE-EEeCCCeEEEEECCCCcEEEEec-CCCcEEEEEEcCCCCEEEEEc-CCC-cEEEEeCcCeeeeccCccccccccCcC
Confidence 88 599999999999987664 4555 456899999999999999887 556 9999999998888775321 1
Q ss_pred --ceeEEEeecCceEEEee
Q 020784 303 --SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 303 --~~~~~~s~d~~~la~~~ 319 (321)
...+++++||++|+.+.
T Consensus 287 ~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 287 PHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp CCEEEEEECTTSSEEEEEE
T ss_pred cceeEEEECCCCCEEEEee
Confidence 22458889999998764
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=6e-28 Score=216.19 Aligned_cols=224 Identities=13% Similarity=0.203 Sum_probs=181.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|+|++|++|+.++ ++||+..+++....... |...+..++++++++.+++++ .|+.|++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~-------~d~~i~v 91 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSAS-------DDKTLKI 91 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEEC-------CCCEEEE
Confidence 57888999999999999999998765 88999988876655544 678899999999999998888 6799999
Q ss_pred EeCCCCcEEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 161 WDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
||+++++++..+..+ ..|.++.|+++ .++++. ++.|++||+++++.+..+..|..++..+++++ ++.+++ +|+
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~-~~~ 168 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR--DGSLIV-SSS 168 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT--TSSEEE-EEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC--CCCEEE-EEe
Confidence 999999988888755 47999999875 455554 57999999999999999988876655555554 557777 589
Q ss_pred CCCcEEEEeeCCcc-eEEe-eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce----eEEEe-
Q 020784 237 QKGQVRVEHYASKR-TKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA----QSGLW- 309 (321)
Q Consensus 237 ~dg~V~i~d~~~~~-~~~l-~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~----~~~~s- 309 (321)
.||.|++||+..+. +..+ ..|...|.+++|+|+|++|++++.||. |+|||+++++++.++. ++... ...++
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~ 246 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYT-GHKNEKYCIFANFSV 246 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEEC-SSCCSSSCCCEEEEC
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEE-ecCCceEEEEEEEEe
Confidence 99999999998765 3444 457788999999999999999999999 9999999999999885 33321 12333
Q ss_pred ecCceEEEe
Q 020784 310 LSSAWLRVL 318 (321)
Q Consensus 310 ~d~~~la~~ 318 (321)
.++++|+.+
T Consensus 247 ~~~~~l~sg 255 (312)
T 4ery_A 247 TGGKWIVSG 255 (312)
T ss_dssp SSSCEEEEC
T ss_pred CCCcEEEEE
Confidence 567777764
No 27
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=3.1e-29 Score=230.13 Aligned_cols=200 Identities=12% Similarity=0.049 Sum_probs=163.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCC-eEEEEeCCCCCCCCCCcEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~sg~~~~~~~d~~v~ 159 (321)
..|...|++++|+|||++|++|+.++ |+|||+.+.+....... |.+.+..++++++++ .+++++ .|++|+
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~-------~dg~v~ 207 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-HSSEVNCVAACPGKDTIFLSCG-------EDGRIL 207 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTCSSCEEEEE-------TTSCEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCceeeeec-------cCCceE
Confidence 46888999999999999999998865 88999999887766654 678899999988775 555555 679999
Q ss_pred EEeCCCCcEEEEEee---CCceeEEEEeCC---eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEE
Q 020784 160 IWDDHQSRCIGELSF---RSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 160 iWD~~~~~~~~~~~~---~~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la 232 (321)
|||+++++.+..+.. ...+.+++|+++ .++++. ++.|++||+++++.++++..+...+..++|++++ ..+||
T Consensus 208 ~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~la 286 (357)
T 4g56_B 208 LWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHS-SPFLA 286 (357)
T ss_dssp ECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSS-SCCEE
T ss_pred EEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCC-CCEEE
Confidence 999999887665543 346899999864 344444 4699999999999999999888777777776653 24666
Q ss_pred eecCCCCcEEEEeeCCcceEEeeccccceeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCc
Q 020784 233 CPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGT 292 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~~tg~ 292 (321)
+|+.||+|+|||..++++....+|.+.|++|+|+| ++.+|||||.||+ |+|||+.+..
T Consensus 287 -sgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~-v~iW~~~~~~ 345 (357)
T 4g56_B 287 -SISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHK-VLHHHLPSEG 345 (357)
T ss_dssp -EEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSC-EEEEECC---
T ss_pred -EEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCe-EEEEECCCCC
Confidence 59999999999999888777779999999999998 7999999999999 9999997643
No 28
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=8.8e-28 Score=217.86 Aligned_cols=229 Identities=12% Similarity=0.107 Sum_probs=179.5
Q ss_pred ccCCCCCCeEEEEEcCC---CCEEEEEcCCc-EEEEEecC-Ccee-EEeeeecCCceEEEEEecCCCeEEEEeCCCCCCC
Q 020784 80 TSSSPPPTLLHISFNQD---HGCFAAGTDHG-FRIYNCDP-FREI-FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (321)
Q Consensus 80 ~~~~~~~~V~~v~fs~d---g~~lasg~~~g-v~vw~~~~-~~~~-~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~ 153 (321)
....|.+.|++++|+|+ |++|++|+.++ |+|||+.+ .... ..... |.+.|..++++++++.+++++
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~------- 105 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTAS------- 105 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEE-------
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEc-------
Confidence 34678899999999999 69999999865 88999987 3333 22222 788999999999999998887
Q ss_pred CCCcEEEEeCCCCcEEEEEeeCCceeEEEE--eCCe--EEEEE-CCEEEEEEcCCcEEEEEEeccCC-------------
Q 020784 154 PLNKVMIWDDHQSRCIGELSFRSEVRSVKL--RRDR--IIVVL-EQKIFVYNFADLKLLHQIETIAN------------- 215 (321)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~--~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~~~~~------------- 215 (321)
.|+.|++||+++++.+....+...|.+++| +++. ++++. ++.|++||+++++.+..+..+..
T Consensus 106 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVV 185 (368)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEE
T ss_pred CCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEE
Confidence 679999999999998887778889999999 6654 44444 57999999998887777664431
Q ss_pred ----------------------------CCceEEEeeCCCc--eEEEeecCCCCcEEEEeeCCc----ceEEeecccc--
Q 020784 216 ----------------------------PKGLCAVSQGVGS--LVLVCPGLQKGQVRVEHYASK----RTKFIMAHDS-- 259 (321)
Q Consensus 216 ----------------------------~~~~~~~s~~~d~--~~la~sGs~dg~V~i~d~~~~----~~~~l~~H~~-- 259 (321)
...++++..+... ..++ +|+.||.|++|++... .+..+.+|..
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA-LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE-EEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE-EecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 1122333333221 2255 5899999999998764 3567888877
Q ss_pred ----------ceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcc--eeEEEeecCceEEEee
Q 020784 260 ----------RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSIS--AQSGLWLSSAWLRVLR 319 (321)
Q Consensus 260 ----------~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~--~~~~~s~d~~~la~~~ 319 (321)
.|++++|+|+|++||+|+.||. |+|||+.+++++.++. ++.. ..++++++|++|+++.
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-FSFWDKDARTKLKTSE-QLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEEEECC-CCSSCEEEEEECTTSSCEEEEE
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCe-EEEEECCCCcEEEEec-CCCCCceEEEECCCCCeEEEEe
Confidence 7999999999999999999999 9999999999999885 4443 3458889999999875
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=8.9e-28 Score=220.04 Aligned_cols=224 Identities=9% Similarity=0.074 Sum_probs=180.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCC------ceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCC
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPF------REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~------~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d 155 (321)
.|...|.+++|+|+|.+||+|+.++ +++|++... ........ |.+.+..+.+.+++..+++++ .|
T Consensus 104 ~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~s-------~D 175 (354)
T 2pbi_B 104 MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-HTNYLSACSFTNSDMQILTAS-------GD 175 (354)
T ss_dssp CSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEE-CSSCEEEEEECSSSSEEEEEE-------TT
T ss_pred cCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeec-cCCcEEEEEEeCCCCEEEEEe-------CC
Confidence 4566899999999999999999866 779998543 12222222 688899999999998888888 67
Q ss_pred CcEEEEeCCCCcEEEEEeeC-CceeEEEEeC----CeEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCce
Q 020784 156 NKVMIWDDHQSRCIGELSFR-SEVRSVKLRR----DRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~----~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~ 229 (321)
++|++||+++++.+..+..+ ..|.++.+++ +.++.++ ++.|++||+++++.++.+..|...+..+++++ ++.
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p--~~~ 253 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP--SGD 253 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT--TSS
T ss_pred CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC--CCC
Confidence 99999999999998888755 4788888865 3455555 57999999999999999988877666666655 557
Q ss_pred EEEeecCCCCcEEEEeeCCcc-eEEeec--cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee-
Q 020784 230 VLVCPGLQKGQVRVEHYASKR-TKFIMA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ- 305 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~~~~-~~~l~~--H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~- 305 (321)
+++ +|+.||+|++||+.... +..+.. +...+++++|+|+|++|++|+.|++ |+|||+.+++++.++. +|...+
T Consensus 254 ~l~-s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~l~-~h~~~v~ 330 (354)
T 2pbi_B 254 AFA-SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRVSILF-GHENRVS 330 (354)
T ss_dssp EEE-EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEEEEEC-CCSSCEE
T ss_pred EEE-EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceEEEEE-CCCCcEE
Confidence 787 59999999999998754 334443 3457899999999999999999999 9999999999998884 666544
Q ss_pred -EEEeecCceEEEee
Q 020784 306 -SGLWLSSAWLRVLR 319 (321)
Q Consensus 306 -~~~s~d~~~la~~~ 319 (321)
+.+++||++|+.+.
T Consensus 331 ~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 331 TLRVSPDGTAFCSGS 345 (354)
T ss_dssp EEEECTTSSCEEEEE
T ss_pred EEEECCCCCEEEEEc
Confidence 47788999999864
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=216.33 Aligned_cols=225 Identities=15% Similarity=0.177 Sum_probs=165.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCC-------ceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCC
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPF-------REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~-------~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d 155 (321)
|...|++++|+|+|++||+|+.++ |+||++... +....... |.+.|..++++++++.+++++ .|
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s-------~D 128 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCS-------RD 128 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEE-------TT
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEe-------CC
Confidence 788999999999999999998755 889998532 22222222 678899999999999999888 68
Q ss_pred CcEEEEeCCCC----cEEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCc--EEEEEEeccCCCCceEEEeeC
Q 020784 156 NKVMIWDDHQS----RCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADL--KLLHQIETIANPKGLCAVSQG 225 (321)
Q Consensus 156 ~~v~iWD~~~~----~~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~--~~~~~l~~~~~~~~~~~~s~~ 225 (321)
++|+|||++.. +++..+..+ ..|.++.|+++ .++.++ +++|++||+.++ +++..+.+|...+..++++++
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCS
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCC
Confidence 99999999432 455556544 57999999875 455554 579999999765 678888888887777777776
Q ss_pred CCceEEEeecCCCCcEEEEeeCCc---------ceEEeec-cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCc--E
Q 020784 226 VGSLVLVCPGLQKGQVRVEHYASK---------RTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT--L 293 (321)
Q Consensus 226 ~d~~~la~sGs~dg~V~i~d~~~~---------~~~~l~~-H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~--~ 293 (321)
.++..|+ +|+.||+|++|++... ....+.+ |...|++|+|++++ +||+++.||+ |+|||+.+++ +
T Consensus 209 ~~~~~l~-s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-v~iw~~~~~~~~~ 285 (330)
T 2hes_X 209 EGVFRLC-SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-LAVYEEVDGEWKV 285 (330)
T ss_dssp SSSCEEE-EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-EEEEEEETTEEEE
T ss_pred CCeeEEE-EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-EEEEEcCCCceEE
Confidence 5466777 5999999999998643 2334554 99999999999765 7999999999 9999999884 4
Q ss_pred EEEEeCCCcc-ee--EEEee--cCceEEEee
Q 020784 294 LQEECCPSIS-AQ--SGLWL--SSAWLRVLR 319 (321)
Q Consensus 294 i~~~~~g~~~-~~--~~~s~--d~~~la~~~ 319 (321)
+.....+|.. .+ +.+++ ++++||.+.
T Consensus 286 ~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 286 FAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred EeccccccccceEEEEEEecCCCceEEEEec
Confidence 4444345554 33 35555 678888764
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=1.9e-26 Score=206.85 Aligned_cols=225 Identities=9% Similarity=0.141 Sum_probs=183.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
.|...|++++|+|+|++|++|+.++ +++||+.+.+......+. |...+..++++++++.+++++ .|+.|++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~v~~ 167 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-------SDGNIAV 167 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE-------TTSCEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe-------CCCcEEE
Confidence 5778999999999999999998755 889999887633333221 567899999999999888887 6799999
Q ss_pred EeCCCCcEEEEEee-CCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 161 WDDHQSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
||+++++.+..+.. ...|.+++|+++ .++++. ++.|++||+++++.+..+.. ... +.++...+++.++++ |+
T Consensus 168 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~--v~~~~~s~~~~~l~~-~~ 243 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF-TSQ--IFSLGYCPTGEWLAV-GM 243 (337)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-SSC--EEEEEECTTSSEEEE-EE
T ss_pred EeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC-CCc--eEEEEECCCCCEEEE-Ec
Confidence 99999998888774 458999999875 455555 56999999999998888753 233 444555556688884 88
Q ss_pred CCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEE
Q 020784 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLR 316 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la 316 (321)
.+|.|++|++.......+..|...|++++|+|+|++|++++.||. |+|||+.+++.+...........+.+++++++|+
T Consensus 244 ~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 322 (337)
T 1gxr_A 244 ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQSKESSSVLSCDISVDDKYIV 322 (337)
T ss_dssp TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEECSSCEEEEEECTTSCEEE
T ss_pred CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc-EEEEECCCCeEEEEecCCCcEEEEEECCCCCEEE
Confidence 899999999998888889999999999999999999999999999 9999999999987775555555668889999998
Q ss_pred Eee
Q 020784 317 VLR 319 (321)
Q Consensus 317 ~~~ 319 (321)
++.
T Consensus 323 ~~~ 325 (337)
T 1gxr_A 323 TGS 325 (337)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1.1e-27 Score=237.87 Aligned_cols=228 Identities=14% Similarity=0.097 Sum_probs=180.4
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCc-EEEEEecCCce-----eEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCC
Q 020784 82 SSPPPTLLHISFNQDH-GCFAAGTDHG-FRIYNCDPFRE-----IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg-~~lasg~~~g-v~vw~~~~~~~-----~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~ 154 (321)
..|.+.|++|+|++++ ++|++|+.|+ |+||++..... ...... |.+.|..++++++++.+++++ .
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs-------~ 450 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGS-------W 450 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEE-------T
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCCEEEEEe-------C
Confidence 5799999999999875 7899998765 88999875421 122222 788899999999999998888 6
Q ss_pred CCcEEEEeCCCCcEEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEE---eccCCCCceEEEeeCCC
Q 020784 155 LNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQI---ETIANPKGLCAVSQGVG 227 (321)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l---~~~~~~~~~~~~s~~~d 227 (321)
|++|+|||+.++..+..+..+ ..|.+++|+++ .++.++ +++|++||+......... ..|...+.++++++++.
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 899999999999988887654 58999999875 455555 579999998765443322 23444455666666544
Q ss_pred ceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeE
Q 020784 228 SLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQS 306 (321)
Q Consensus 228 ~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~ 306 (321)
...++ +|+.||.|++||+.... ..++.+|.+.|++|+|+|+|++||||+.||+ |+|||+++++++.++........+
T Consensus 531 ~~~l~-s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~~~~~~v~~~ 608 (694)
T 3dm0_A 531 QPTIV-SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSLEANSVIHAL 608 (694)
T ss_dssp SCEEE-EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECCBCSSCEEEE
T ss_pred cceEE-EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEecCCCcEEEE
Confidence 45666 59999999999998765 5589999999999999999999999999999 999999999999888655445556
Q ss_pred EEeecCceEEEee
Q 020784 307 GLWLSSAWLRVLR 319 (321)
Q Consensus 307 ~~s~d~~~la~~~ 319 (321)
++++++.+|+.+.
T Consensus 609 ~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 609 CFSPNRYWLCAAT 621 (694)
T ss_dssp EECSSSSEEEEEE
T ss_pred EEcCCCcEEEEEc
Confidence 8889999987753
No 33
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=5.4e-27 Score=211.09 Aligned_cols=229 Identities=13% Similarity=0.096 Sum_probs=179.7
Q ss_pred cCCCCCCeEEEEEcCC-CCEEEEEcCCc-EEEEEecCCcee---EEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCC
Q 020784 81 SSSPPPTLLHISFNQD-HGCFAAGTDHG-FRIYNCDPFREI---FRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~d-g~~lasg~~~g-v~vw~~~~~~~~---~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~ 154 (321)
.++|.+.|++|+|+|+ +++||+|+.|+ |+|||+.+.+.. ....+. |.+.|..++++++++.+++++ .
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~-------~ 106 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS-------W 106 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE-------T
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc-------c
Confidence 3679999999999998 68999998765 899999765421 122221 678899999999999998888 6
Q ss_pred CCcEEEEeCCCCcEEEEEeeCC-ceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEE-EEeccCCCCceEEEeeCCCce
Q 020784 155 LNKVMIWDDHQSRCIGELSFRS-EVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLH-QIETIANPKGLCAVSQGVGSL 229 (321)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~~-~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~-~l~~~~~~~~~~~~s~~~d~~ 229 (321)
|+.|++|+.............. .+..+.+.+. .++.+. ++.+++||+....... .+..|...+..+++++++...
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 8999999999888766665443 5666666653 455554 5799999997655433 234455666677787777666
Q ss_pred EEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEEE
Q 020784 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQSGL 308 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~ 308 (321)
+++ +|+.|+.|++||..... ...+.+|.+.|++|+|+|+|++||+|+.||+ |+|||+++++++..+........+.+
T Consensus 187 ~~~-s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~~~~v~~~~~ 264 (340)
T 4aow_A 187 IIV-SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLDGGDIINALCF 264 (340)
T ss_dssp EEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEE-EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeecCCceEEeeec
Confidence 776 58999999999998765 5688999999999999999999999999999 99999999999999976555555677
Q ss_pred eecCceEEEe
Q 020784 309 WLSSAWLRVL 318 (321)
Q Consensus 309 s~d~~~la~~ 318 (321)
++++.+++.+
T Consensus 265 ~~~~~~~~~~ 274 (340)
T 4aow_A 265 SPNRYWLCAA 274 (340)
T ss_dssp CSSSSEEEEE
T ss_pred CCCCceeecc
Confidence 7887777654
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=6e-28 Score=236.69 Aligned_cols=223 Identities=13% Similarity=0.089 Sum_probs=177.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
+++.+.+++|+|||++||+++++.++||++.+.+....... |.+.|.+++++++++++++++ .|++|+|||+
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~-h~~~v~~~~~spdg~~lasg~-------~d~~v~lWd~ 88 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTE-HSHQTTVAKTSPSGYYCASGD-------VHGNVRIWDT 88 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEEEEES
T ss_pred ccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecC-CCCceEEEEECCCCcEEEEEe-------CCCCEEEeEC
Confidence 45578889999999999999988899999987766555544 788999999999999999988 6899999999
Q ss_pred CCCc--EEEEEe-eCCceeEEEEeCCe--EEEEECC-----EEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 164 HQSR--CIGELS-FRSEVRSVKLRRDR--IIVVLEQ-----KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 164 ~~~~--~~~~~~-~~~~v~~v~~~~~~--~~~~~~~-----~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
.+++ ...++. +...|.+++|+++. ++++.++ .|++||. ++.+.++.+|...+..++|++++. ..|+
T Consensus 89 ~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~-~~l~- 164 (611)
T 1nr0_A 89 TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVDFKPSRP-FRII- 164 (611)
T ss_dssp SSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEEECSSSS-CEEE-
T ss_pred CCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEEECCCCC-eEEE-
Confidence 7544 344454 34589999999864 4555432 6778874 455667788877766677766432 2455
Q ss_pred ecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC------CCccee-
Q 020784 234 PGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC------PSISAQ- 305 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~------g~~~~~- 305 (321)
+|+.|++|++||..... ..++.+|...|++++|+|||++|||||.|++ |+|||+.+|+++.++.. +|...+
T Consensus 165 s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~-i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 165 SGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT-IVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp EEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred EEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCc-EEEEECCCCcEeeeeccccccccccCCCEE
Confidence 69999999999987654 5689999999999999999999999999999 99999999999998853 566544
Q ss_pred -EEEeecCceEEEee
Q 020784 306 -SGLWLSSAWLRVLR 319 (321)
Q Consensus 306 -~~~s~d~~~la~~~ 319 (321)
+.+++||++|+.+.
T Consensus 244 ~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 244 GLTWSPDGTKIASAS 258 (611)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 47778999998864
No 35
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.1e-27 Score=213.38 Aligned_cols=230 Identities=17% Similarity=0.132 Sum_probs=171.8
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecC--CCeEEEEeCCCCCCCCCC
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPLN 156 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~~~sg~~~~~~~d~ 156 (321)
...|...|++++|+|||++||+|+.++ |+||++..........+. |.+.|..++++++ ++.+++++ .|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-------~dg 79 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------YDG 79 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-------TTS
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec-------cCC
Confidence 456888999999999999999998755 889999854333333332 6788999999876 78888887 679
Q ss_pred cEEEEeCCCCc--EEEEEe-eCCceeEEEEeCC----eEEEEE-CCEEEEEEcCCcE--EEEEEeccCCCCceEEEeeCC
Q 020784 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGV 226 (321)
Q Consensus 157 ~v~iWD~~~~~--~~~~~~-~~~~v~~v~~~~~----~~~~~~-~~~I~iwd~~~~~--~~~~l~~~~~~~~~~~~s~~~ 226 (321)
.|++||+++++ .+..+. +...|.+++|+++ .++++. ++.|++||+++.+ ....+..|...+..+++++..
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999987 444444 3458999999976 355554 5799999998763 333455565555555555521
Q ss_pred -----------CceEEEeecCCCCcEEEEeeCCcc-----eEEeeccccceeEEEECCC---CCEEEEEeCCCcEEEEEE
Q 020784 227 -----------GSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQD---GQLLATSSTKGTLVRIFN 287 (321)
Q Consensus 227 -----------d~~~la~sGs~dg~V~i~d~~~~~-----~~~l~~H~~~V~~vafspd---g~~las~S~Dgt~IrIWd 287 (321)
++.+++ +|+.||.|++||+.... ...+.+|...|++++|+|+ +.+||+++.||+ |+|||
T Consensus 160 ~~~~~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~-i~iwd 237 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWT 237 (379)
T ss_dssp ----------CTTCEEE-EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEEE
T ss_pred ccccccccCCCCCCEEE-EEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-EEEEe
Confidence 457777 48999999999987542 3478899999999999999 899999999999 99999
Q ss_pred cCCCc---EEEEEeC-CCcc--eeEEEeecCceEEEee
Q 020784 288 TLDGT---LLQEECC-PSIS--AQSGLWLSSAWLRVLR 319 (321)
Q Consensus 288 ~~tg~---~i~~~~~-g~~~--~~~~~s~d~~~la~~~ 319 (321)
+++++ ....+.. ++.. ..+.+++++++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 99874 2222221 1332 3447788999998764
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=6.6e-27 Score=226.11 Aligned_cols=221 Identities=17% Similarity=0.222 Sum_probs=179.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|||++|++|+.++ +++|+.. .+....... |...+..++++++++.+++++ .|+.|++
T Consensus 341 ~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~~~~~~-~~~~v~~~~~s~dg~~l~~~~-------~d~~v~~ 411 (577)
T 2ymu_A 341 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTG-HSSSVRGVAFSPDGQTIASAS-------DDKTVKL 411 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEEEEEEC-CSSCEEEEEECTTSSCEEEEE-------TTSEEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEEEEecC-CCCCeEEEEECCCCCEEEEEe-------CCCEEEE
Confidence 45778999999999999999999866 7899954 444434333 678899999999999998887 6799999
Q ss_pred EeCCCCcEEEEEee-CCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 161 WDDHQSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
||. +++.+..+.. ...|.+++|+++ .++++. ++.|++||. +++.+..+..|...+..+++++ ++.+|| +|+
T Consensus 412 ~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~sp--d~~~la-s~~ 486 (577)
T 2ymu_A 412 WNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP--DGQTIA-SAS 486 (577)
T ss_dssp ECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT--TSCEEE-EEE
T ss_pred EeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcC--CCCEEE-EEe
Confidence 995 4566666654 458999999875 455554 469999996 4677888888877666666655 568888 589
Q ss_pred CCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee--EEEeecCce
Q 020784 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ--SGLWLSSAW 314 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~~s~d~~~ 314 (321)
.||.|++|+...+.+..+.+|...|++|+|+|||++||+++.||+ |+|||+ +|++++++. +|...+ +.|++||++
T Consensus 487 ~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~-v~lwd~-~~~~~~~~~-~h~~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 487 DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQT 563 (577)
T ss_dssp TTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE-EEEECT-TSCEEEEEE-CCSSCEEEEEECTTSSC
T ss_pred CCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE-EEEEeC-CCCEEEEEc-CCCCCEEEEEEcCCCCE
Confidence 999999999877778899999999999999999999999999999 999995 789999985 666544 478899999
Q ss_pred EEEee
Q 020784 315 LRVLR 319 (321)
Q Consensus 315 la~~~ 319 (321)
|+.+.
T Consensus 564 l~s~~ 568 (577)
T 2ymu_A 564 IASAS 568 (577)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98764
No 37
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=6.1e-29 Score=227.93 Aligned_cols=223 Identities=12% Similarity=0.040 Sum_probs=164.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCc--eeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR--EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~--~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
.+.++|++++|+|||++||+|+.++ |+|||+.+.. ....... |.+.|..++++++++.+++++ .|++|+
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s-------~d~~v~ 80 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRIVTCS-------QDRNAY 80 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCEEEEE-------TTSSEE
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEEEEEe-------CCCeEE
Confidence 3556899999999999999997755 8899999873 3333332 678899999999999998888 679999
Q ss_pred EEeCCCCc---EEEEE-eeCCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcE---EEEEEec-cCCCCceEEEeeCCCc
Q 020784 160 IWDDHQSR---CIGEL-SFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLK---LLHQIET-IANPKGLCAVSQGVGS 228 (321)
Q Consensus 160 iWD~~~~~---~~~~~-~~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~---~~~~l~~-~~~~~~~~~~s~~~d~ 228 (321)
|||+.+++ ....+ .+...|.+++|+++ .++++. ++.|++||+++++ ..+.+.. |...+..++++ +++
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~ 158 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWH--PNN 158 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEEC--TTS
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEc--CCC
Confidence 99999876 33333 35568999999875 455555 5799999998876 3667776 65555555554 466
Q ss_pred eEEEeecCCCCcEEEEeeCC-------------------cceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 020784 229 LVLVCPGLQKGQVRVEHYAS-------------------KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 229 ~~la~sGs~dg~V~i~d~~~-------------------~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~ 289 (321)
.+|+ +|+.||.|++||+.. ..+..+ +|...|++++|+|+|++||+++.||+ |+|||+.
T Consensus 159 ~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd~~ 235 (377)
T 3dwl_C 159 VLLA-AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS-VTIAYPS 235 (377)
T ss_dssp SEEE-EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE-EC-CEEC
T ss_pred CEEE-EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc-EEEEECC
Confidence 7887 489999999999851 223455 99999999999999999999999999 9999999
Q ss_pred CCcE----EEEEeCCCcc--eeEEEeecCceEEEee
Q 020784 290 DGTL----LQEECCPSIS--AQSGLWLSSAWLRVLR 319 (321)
Q Consensus 290 tg~~----i~~~~~g~~~--~~~~~s~d~~~la~~~ 319 (321)
++++ +.++. ++.. ..+.+++++++|+.+.
T Consensus 236 ~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 236 APEQPPRALITVK-LSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp STTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEES
T ss_pred CCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEc
Confidence 9987 66664 4443 3457889999998753
No 38
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=1.2e-26 Score=207.83 Aligned_cols=227 Identities=13% Similarity=0.184 Sum_probs=179.8
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|...|.+++|+|+|++|++|+.++ ++|||+.+.+....... |...+..+.+.++++.+++++ .|++|+
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~-------~d~~i~ 132 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGS-------FDESVR 132 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEE-------TTSCEE
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEe-------CCCcEE
Confidence 356778999999999999999998865 88999999887665554 678899999999999998887 679999
Q ss_pred EEeCCCCcEEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeec
Q 020784 160 IWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sG 235 (321)
+||+++++.+..+..+ ..|.++.|+++ .++++. ++.|++||+++++.+..+..+.. ..+..+..++++.+++ +|
T Consensus 133 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~ 210 (312)
T 4ery_A 133 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYIL-AA 210 (312)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSC-CCEEEEEECTTSSEEE-EE
T ss_pred EEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCC-CceEEEEECCCCCEEE-EE
Confidence 9999999988887654 57999999875 355554 57999999999988887754322 2233344455667887 48
Q ss_pred CCCCcEEEEeeCCcc-eEEeeccccceeEE--EEC-CCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeE--EEe
Q 020784 236 LQKGQVRVEHYASKR-TKFIMAHDSRIACF--ALT-QDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQS--GLW 309 (321)
Q Consensus 236 s~dg~V~i~d~~~~~-~~~l~~H~~~V~~v--afs-pdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~--~~s 309 (321)
+.||.|++||+.... +..+.+|...+.++ .|+ +++.+|++|+.||+ |+|||+++++++.++. +|...+. .++
T Consensus 211 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~-~h~~~v~~~~~~ 288 (312)
T 4ery_A 211 TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL-VYIWNLQTKEIVQKLQ-GHTDVVISTACH 288 (312)
T ss_dssp ETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC-EEEEETTTCCEEEEEC-CCSSCEEEEEEC
T ss_pred cCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE-EEEEECCCchhhhhhh-ccCCcEEEEeec
Confidence 999999999998765 56788887764433 344 77899999999999 9999999999999985 5655443 667
Q ss_pred ecCceEEEee
Q 020784 310 LSSAWLRVLR 319 (321)
Q Consensus 310 ~d~~~la~~~ 319 (321)
+++.+|+.+.
T Consensus 289 p~~~~l~s~~ 298 (312)
T 4ery_A 289 PTENIIASAA 298 (312)
T ss_dssp SSSSEEEEEE
T ss_pred CcCCceEEEE
Confidence 8889998764
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-26 Score=210.17 Aligned_cols=224 Identities=12% Similarity=0.101 Sum_probs=164.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCc--eeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR--EIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~--~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
..|...|++++|+++ +||+|+.++ |+|||+.... ........ |.+.|..++++++++.+++++ .|++
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s-------~D~~ 81 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS-------FDST 81 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe-------CCCc
Confidence 468889999999998 899888755 8899998753 22222111 577899999999999998888 6899
Q ss_pred EEEEeCCC-------CcEEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCC----cEEEEEEeccCCCCceEEE
Q 020784 158 VMIWDDHQ-------SRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFAD----LKLLHQIETIANPKGLCAV 222 (321)
Q Consensus 158 v~iWD~~~-------~~~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~----~~~~~~l~~~~~~~~~~~~ 222 (321)
|+|||.+. .+.+..+..+ ..|.+++|+++ .++.++ +++|++||++. .+.+..+..|...+..+++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999853 2345555543 57999999976 455555 57999999942 3677788888776655666
Q ss_pred eeCCCceEEEeecCCCCcEEEEeeCCc---ceEEeeccccceeEEEECCC--CCEEEEEeCCCcEEEEEEcCCC------
Q 020784 223 SQGVGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQD--GQLLATSSTKGTLVRIFNTLDG------ 291 (321)
Q Consensus 223 s~~~d~~~la~sGs~dg~V~i~d~~~~---~~~~l~~H~~~V~~vafspd--g~~las~S~Dgt~IrIWd~~tg------ 291 (321)
++ ++.+|+ +|+.||+|++|+.... .+.++.+|.+.|++++|+|+ +.+||||+.|++ |||||+.++
T Consensus 162 ~p--~~~~l~-s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 162 HP--SEALLA-SSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDEDDQQ 237 (330)
T ss_dssp CS--SSSEEE-EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTTSCE
T ss_pred CC--CCCEEE-EEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCccccc
Confidence 55 557887 5999999999998654 46689999999999999999 779999999999 999999875
Q ss_pred --cEEEEEeCCCcceeEEEee-cCceEEEe
Q 020784 292 --TLLQEECCPSISAQSGLWL-SSAWLRVL 318 (321)
Q Consensus 292 --~~i~~~~~g~~~~~~~~s~-d~~~la~~ 318 (321)
++...+...|...+.++++ ++.+|+.+
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~ 267 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNGLIASV 267 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTSCEEEE
T ss_pred eeEEeeecccccccceEEEEEcCCCEEEEE
Confidence 4555554335544443333 23455554
No 40
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=8.5e-27 Score=212.18 Aligned_cols=224 Identities=11% Similarity=0.032 Sum_probs=169.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|++.+|++|+.|+ |+|||+.+++....... |.+.|..++++++++.+++++ .|++|++
T Consensus 73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~-------~d~~i~~ 144 (343)
T 2xzm_R 73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQILSAG-------AEREIKL 144 (343)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEEEEE-------TTSCEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEEEEc-------CCCEEEE
Confidence 56888999999999999999999755 88999999887655554 688999999999999998887 6899999
Q ss_pred EeCCCCcEEEEE---eeCCceeEEEEeCC------------eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEee
Q 020784 161 WDDHQSRCIGEL---SFRSEVRSVKLRRD------------RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (321)
Q Consensus 161 WD~~~~~~~~~~---~~~~~v~~v~~~~~------------~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~ 224 (321)
||+......... .+...|.++.|+++ .++.++ ++.|++|| .+.+....+..|...+..++++
T Consensus 145 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s- 222 (343)
T 2xzm_R 145 WNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSIS- 222 (343)
T ss_dssp EESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEEC-
T ss_pred EeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEEC-
Confidence 999844332222 23446899999875 345554 57999999 4567778888887665555555
Q ss_pred CCCceEEEeecCCCCcEEEEeeC-CcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEE--EEe---
Q 020784 225 GVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ--EEC--- 298 (321)
Q Consensus 225 ~~d~~~la~sGs~dg~V~i~d~~-~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~--~~~--- 298 (321)
+++.+|+ +|+.||.|++||+. .........|...|++++|+|++++|+++ .|++ |+|||+.+++... ++.
T Consensus 223 -~~g~~l~-sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~-v~iw~~~~~~~~~~~~~~~~~ 298 (343)
T 2xzm_R 223 -PNGKYIA-TGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQG-VKIFNLMTQSKAPVCTIEAEP 298 (343)
T ss_dssp -TTSSEEE-EEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSC-EEEEESSSCCSCSEEECCCCS
T ss_pred -CCCCEEE-EEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCC-EEEEEeCCCCCCceEEeecCc
Confidence 4668888 59999999999984 33332333456679999999999988765 4888 9999999887544 332
Q ss_pred -------CCCcce--eEEEeecCceEEEee
Q 020784 299 -------CPSISA--QSGLWLSSAWLRVLR 319 (321)
Q Consensus 299 -------~g~~~~--~~~~s~d~~~la~~~ 319 (321)
.++... .++++++|++|+++.
T Consensus 299 ~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 299 ITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp GGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred chhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 134333 347788899998864
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=1e-26 Score=208.41 Aligned_cols=202 Identities=13% Similarity=0.134 Sum_probs=152.7
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCce----eEEeeeecCCceEEEEEec--CCCeEEEEeCCCCCC
Q 020784 80 TSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE----IFRRDFERGGGIGVVEMLF--RCNILALVGGGPDPQ 152 (321)
Q Consensus 80 ~~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~----~~~~~~~~~~~v~~v~~~~--~~~~~~~~sg~~~~~ 152 (321)
+...|.+.|++++|+|+|++||+|+.++ |+|||+.+... ...... |.+.|..+++++ +++.+++++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~------ 78 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGRIIASAS------ 78 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEE------
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCCEEEEEc------
Confidence 3467889999999999999999999866 88999987642 222222 678899999988 478888877
Q ss_pred CCCCcEEEEeCCCC---------cEEEEEe-eCCceeEEEEeCC----eEEEEE-CCEEEEEEcCCcEEEEEEe------
Q 020784 153 YPLNKVMIWDDHQS---------RCIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLKLLHQIE------ 211 (321)
Q Consensus 153 ~~d~~v~iWD~~~~---------~~~~~~~-~~~~v~~v~~~~~----~~~~~~-~~~I~iwd~~~~~~~~~l~------ 211 (321)
.|++|++||++++ +.+..+. +...|.+++|+++ .+++++ ++.|++||+++++.+..+.
T Consensus 79 -~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 79 -YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp -TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred -CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 6799999999876 4455554 3458999999975 455554 5799999998765544332
Q ss_pred -------ccCCCCceEEEeeCC-CceEEEeecCCCCcEEEEeeCCcc---eEEeeccccceeEEEECCCC----CEEEEE
Q 020784 212 -------TIANPKGLCAVSQGV-GSLVLVCPGLQKGQVRVEHYASKR---TKFIMAHDSRIACFALTQDG----QLLATS 276 (321)
Q Consensus 212 -------~~~~~~~~~~~s~~~-d~~~la~sGs~dg~V~i~d~~~~~---~~~l~~H~~~V~~vafspdg----~~las~ 276 (321)
.+...+..++++++. ++.++++ |+.+|.+.+|+...+. +..+.+|...|++++|+|++ .+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAV-SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEE-EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEE-ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 233333444555431 1466764 8889999777766554 45788999999999999998 899999
Q ss_pred eCCCcEEEEEEcCCC
Q 020784 277 STKGTLVRIFNTLDG 291 (321)
Q Consensus 277 S~Dgt~IrIWd~~tg 291 (321)
+.||+ |+|||++++
T Consensus 237 ~~dg~-i~iwd~~~~ 250 (351)
T 3f3f_A 237 CKDGR-IRIFKITEK 250 (351)
T ss_dssp ETTSC-EEEEEEEEC
T ss_pred cCCCe-EEEEeCCCC
Confidence 99999 999999886
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=2.5e-26 Score=209.27 Aligned_cols=224 Identities=13% Similarity=0.102 Sum_probs=175.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCc--eeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR--EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~--~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
.|..+|++++|+|||++|++|+.++ |+|||+++.+ ....... |.+.+..++++++++.+++++ .|+.|+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~-------~dg~i~ 77 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCG-------TDRNAY 77 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEE-------TTSCEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEc-------CCCeEE
Confidence 4778999999999999999997655 8899999886 4433333 678999999999999998887 679999
Q ss_pred EEeCCCCcEEEEEe---eCCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcE---EEEEE-eccCCCCceEEEeeCCCce
Q 020784 160 IWDDHQSRCIGELS---FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLK---LLHQI-ETIANPKGLCAVSQGVGSL 229 (321)
Q Consensus 160 iWD~~~~~~~~~~~---~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~---~~~~l-~~~~~~~~~~~~s~~~d~~ 229 (321)
+||+++++....+. +...|.+++|+++ .++++. ++.|++||+...+ ....+ ..|... +.++.+.+++.
T Consensus 78 vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~ 155 (372)
T 1k8k_C 78 VWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRST--VLSLDWHPNSV 155 (372)
T ss_dssp EEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSC--EEEEEECTTSS
T ss_pred EEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCC--eeEEEEcCCCC
Confidence 99999887655543 4558999999875 455555 4699999997654 23333 233343 44555555667
Q ss_pred EEEeecCCCCcEEEEeeC------------------C-cceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 020784 230 VLVCPGLQKGQVRVEHYA------------------S-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~------------------~-~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~t 290 (321)
+++ +|+.||.|++||+. . ..+..+.+|...|++++|+|+|.+|++++.||+ |+|||+++
T Consensus 156 ~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~~ 233 (372)
T 1k8k_C 156 LLA-AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADADK 233 (372)
T ss_dssp EEE-EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGGG
T ss_pred EEE-EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECCC
Confidence 887 48999999999953 2 345678899999999999999999999999999 99999999
Q ss_pred CcEEEEEeCCCc-ceeEEEeecCceEEEe
Q 020784 291 GTLLQEECCPSI-SAQSGLWLSSAWLRVL 318 (321)
Q Consensus 291 g~~i~~~~~g~~-~~~~~~s~d~~~la~~ 318 (321)
++++.++..... ...+.+++++++|+++
T Consensus 234 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 234 KMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp TTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred CceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 999999964332 3345788999998875
No 43
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1e-26 Score=213.95 Aligned_cols=194 Identities=12% Similarity=0.115 Sum_probs=149.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEc--CC-cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGT--DH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~--~~-gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
.+...|++|+|+|||++||+++ .+ .|+|||+.+++.+.... |.+.|..++++++++.+++++ ++.++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s--------~~~~~ 200 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYIT--------GSSLE 200 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEEC--------SSCEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEecc--------ceeEE
Confidence 3445799999999999987543 44 48899999998877665 578899999999999888776 46688
Q ss_pred EEeCCCCcEEEEEe---eCCceeEEEEeCCe--EEEEE-CC----EEEEEEcCCcEE----EEEEeccCCCCceEEEeeC
Q 020784 160 IWDDHQSRCIGELS---FRSEVRSVKLRRDR--IIVVL-EQ----KIFVYNFADLKL----LHQIETIANPKGLCAVSQG 225 (321)
Q Consensus 160 iWD~~~~~~~~~~~---~~~~v~~v~~~~~~--~~~~~-~~----~I~iwd~~~~~~----~~~l~~~~~~~~~~~~s~~ 225 (321)
+|+..+++.+.... +...|.++.|+++. ++++. ++ .+++|++..... .+.+..|...+..++| .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~--S 278 (365)
T 4h5i_A 201 VISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV--D 278 (365)
T ss_dssp EEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE--C
T ss_pred EEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE--C
Confidence 88888887665433 23468999999864 33333 33 688999865543 3345556555545555 4
Q ss_pred CCceEEEeecCCCCcEEEEeeCCcc-eEE-eeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 020784 226 VGSLVLVCPGLQKGQVRVEHYASKR-TKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 226 ~d~~~la~sGs~dg~V~i~d~~~~~-~~~-l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~t 290 (321)
+|+.+|| +|+.||+|+|||..+.. +.+ +.+|...|++|+|||||++|||||.|++ |||||+..
T Consensus 279 pdg~~la-sgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t-vrvw~ip~ 343 (365)
T 4h5i_A 279 MKGELAV-LASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT-IHIIKLPL 343 (365)
T ss_dssp TTSCEEE-EEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE-EEEEECCT
T ss_pred CCCCceE-EEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe-EEEEEcCC
Confidence 5668998 59999999999998765 555 5799999999999999999999999999 99999964
No 44
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.2e-25 Score=204.87 Aligned_cols=227 Identities=14% Similarity=0.098 Sum_probs=169.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
..|...|++++|+|||++||+|+.++ ++||+...........+. |.+.|..++++++++.+++++ .|++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s-------~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS-------RDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE-------CCCeEE
Confidence 56888999999999999999999755 889999876533233322 678899999999999999888 689999
Q ss_pred EEeCCCCc---EEEEEee-CCceeEEEEeCCe--EEEEE-CCEEEEEEcCCcE--EEEEEeccCCCCceEEEeeCCCceE
Q 020784 160 IWDDHQSR---CIGELSF-RSEVRSVKLRRDR--IIVVL-EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 160 iWD~~~~~---~~~~~~~-~~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~--~~~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
+||++++. ++..+.. ...|.++.|+++. +++++ ++.|++||++.++ ...++.+|...+..++|+ +++.+
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s--p~g~~ 208 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD--PSGQR 208 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC--TTSSE
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC--CCCCE
Confidence 99998764 3344443 4579999998753 55555 5799999998765 446777777665555555 46688
Q ss_pred EEeecCCCCcEEEEeeCCc----------------ceEEeec-cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCc-
Q 020784 231 LVCPGLQKGQVRVEHYASK----------------RTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT- 292 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~~~----------------~~~~l~~-H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~- 292 (321)
|+ +|+.||+|+||+.... .+.++.+ |...|++++|+|++.+||+++.|++ ||||+...+.
T Consensus 209 l~-s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~vw~~~~~~~ 286 (345)
T 3fm0_A 209 LA-SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-IRVFQEDPNSD 286 (345)
T ss_dssp EE-EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-EEEEEECTTSC
T ss_pred EE-EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-EEEEEeCCCCC
Confidence 88 5999999999986321 1234444 8999999999999999999999999 9999998653
Q ss_pred -------EEEEEeCCCcceeE--EEeecC-ceEEEee
Q 020784 293 -------LLQEECCPSISAQS--GLWLSS-AWLRVLR 319 (321)
Q Consensus 293 -------~i~~~~~g~~~~~~--~~s~d~-~~la~~~ 319 (321)
+......+|...+. ++++++ .+||.+.
T Consensus 287 ~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 287 PQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp TTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred cceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 22223356665554 555665 4787654
No 45
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=7.9e-27 Score=210.40 Aligned_cols=224 Identities=12% Similarity=0.073 Sum_probs=175.5
Q ss_pred CCCCCeEEEEEcCCCC-EEEEEcCCc-EEEEEe-cCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 83 SPPPTLLHISFNQDHG-CFAAGTDHG-FRIYNC-DPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~-~lasg~~~g-v~vw~~-~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
.|...|++++|+|+|+ +|++|+.++ |++||+ .+.+........|...+..+++++ ++.+++++ .|+.|+
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~-------~d~~i~ 125 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAAS-------WDGLIE 125 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEE-------TTSEEE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEc-------CCCeEE
Confidence 5777999999999999 999998755 889999 777552222100467899999998 88888877 679999
Q ss_pred EEeCCC---------CcEEEEEeeCCceeEEEEeCCeEEEEEC-CEEEEEEcCC-cEEE--EEEeccCCCCceEEEeeCC
Q 020784 160 IWDDHQ---------SRCIGELSFRSEVRSVKLRRDRIIVVLE-QKIFVYNFAD-LKLL--HQIETIANPKGLCAVSQGV 226 (321)
Q Consensus 160 iWD~~~---------~~~~~~~~~~~~v~~v~~~~~~~~~~~~-~~I~iwd~~~-~~~~--~~l~~~~~~~~~~~~s~~~ 226 (321)
+||+++ ++.+..+.+...|.+++|+++.++++.. +.|++||+++ ++.. .....+.. .+.++...+
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~i~~i~~~~ 203 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY--QIRDVALLP 203 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSS--CEEEEEECS
T ss_pred EEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCC--ceeEEEECC
Confidence 999987 6666666677789999999999777765 6999999987 4432 22223333 345555555
Q ss_pred -CceEEEeecCCCCcEEEEeeCCc-------ceEEeecccc---------ceeEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 020784 227 -GSLVLVCPGLQKGQVRVEHYASK-------RTKFIMAHDS---------RIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 227 -d~~~la~sGs~dg~V~i~d~~~~-------~~~~l~~H~~---------~V~~vafspdg~~las~S~Dgt~IrIWd~~ 289 (321)
++.++++ |+.||.|++|++... ....+..|.. .|++++|+|+|++|++|+.||+ |+|||+.
T Consensus 204 ~~~~~l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~vwd~~ 281 (342)
T 1yfq_A 204 KEQEGYAC-SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-ISCWNLQ 281 (342)
T ss_dssp GGGCEEEE-EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-EEEEETT
T ss_pred CCCCEEEE-EecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-EEEEcCc
Confidence 5677774 889999999998754 3568888866 9999999999999999999999 9999999
Q ss_pred CCcEEEEEeCCC-cceeEEEeecCceEEEee
Q 020784 290 DGTLLQEECCPS-ISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 290 tg~~i~~~~~g~-~~~~~~~s~d~~~la~~~ 319 (321)
+++++.++. ++ ...+..+++++++|+++.
T Consensus 282 ~~~~~~~~~-~~h~~~v~~~~~~~~~l~s~s 311 (342)
T 1yfq_A 282 TRKKIKNFA-KFNEDSVVKIACSDNILCLAT 311 (342)
T ss_dssp TTEEEEECC-CCSSSEEEEEEECSSEEEEEE
T ss_pred cHhHhhhhh-cccCCCceEecCCCCeEEEEe
Confidence 999999885 44 655555559999998875
No 46
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-26 Score=217.12 Aligned_cols=207 Identities=12% Similarity=0.206 Sum_probs=159.2
Q ss_pred cccCCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEecC---Cc---eeEEeeeecCCceEEEEEecCCCeEEEEeCCCC
Q 020784 79 STSSSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDP---FR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPD 150 (321)
Q Consensus 79 ~~~~~~~~~V~~v~fs~-dg~~lasg~~~g-v~vw~~~~---~~---~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~ 150 (321)
.+...|.+.|++++|+| ||++||+|+.++ |+|||+.+ .. ...... |.+.|..++++++++.+++++
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s---- 130 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD--CSSTVTQITMIPNFDAFAVSS---- 130 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE--CSSCEEEEEECTTSSEEEEEE----
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc--CCCCEEEEEEeCCCCEEEEEe----
Confidence 33367889999999999 999999999866 88999876 32 222222 688999999999999998888
Q ss_pred CCCCCCcEEEEeCC---CCcEEEEEee-------------CCceeEEEE--eC--CeEEEEE-CCEEEEEEcCCcEEEEE
Q 020784 151 PQYPLNKVMIWDDH---QSRCIGELSF-------------RSEVRSVKL--RR--DRIIVVL-EQKIFVYNFADLKLLHQ 209 (321)
Q Consensus 151 ~~~~d~~v~iWD~~---~~~~~~~~~~-------------~~~v~~v~~--~~--~~~~~~~-~~~I~iwd~~~~~~~~~ 209 (321)
.|++|++||++ +++....+.. ...+.++.+ ++ ..+++++ ++.|++||+++++.+.+
T Consensus 131 ---~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 131 ---KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI 207 (437)
T ss_dssp ---TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ---CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE
Confidence 68999999994 5555443332 223445443 23 3455554 47999999999999999
Q ss_pred Eec--cCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEee-ccccceeEEEEC----CCCCEEEEEeCCCc
Q 020784 210 IET--IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIM-AHDSRIACFALT----QDGQLLATSSTKGT 281 (321)
Q Consensus 210 l~~--~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~-~H~~~V~~vafs----pdg~~las~S~Dgt 281 (321)
+.. |...+..+++ ++++.+|+ +|+.||.|++||+..+. +.++. .|...|++++|+ +++.+||+|+.||+
T Consensus 208 ~~~~~h~~~v~~~~~--s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~ 284 (437)
T 3gre_A 208 IENSPRHGAVSSICI--DEECCVLI-LGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF 284 (437)
T ss_dssp EECCGGGCCEEEEEE--CTTSCEEE-EEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE
T ss_pred EccCCCCCceEEEEE--CCCCCEEE-EEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc
Confidence 988 5555444444 55668888 59999999999998765 45665 788899999555 56889999999999
Q ss_pred EEEEEEcCCCcEEEEEe
Q 020784 282 LVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 282 ~IrIWd~~tg~~i~~~~ 298 (321)
|+|||+++++++.++.
T Consensus 285 -i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 285 -LTIWNFVKGHCQYAFI 300 (437)
T ss_dssp -EEEEETTTTEEEEEEE
T ss_pred -EEEEEcCCCcEEEEEE
Confidence 9999999999999886
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=2e-27 Score=223.29 Aligned_cols=225 Identities=12% Similarity=0.056 Sum_probs=165.6
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEecCCceeEEeee-ecCCceEEEEEec-CCCeEEEEeCCCCCCCCCCcE
Q 020784 83 SPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDF-ERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 83 ~~~~~V~~v~fs~-dg~~lasg~~~g-v~vw~~~~~~~~~~~~~-~~~~~v~~v~~~~-~~~~~~~~sg~~~~~~~d~~v 158 (321)
.|...|+|++|+| ++++||+|+.+| |+|||+.+.+......+ .|.+.|..++|++ +++.+++++ .|++|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-------~D~~v 189 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-------MEGTT 189 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC-------SSSCE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe-------CCCEE
Confidence 4667899999999 567999999866 88999987765444333 2678899999986 577887776 68999
Q ss_pred EEEeCCCCcEEEEEeeCC---ceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEE
Q 020784 159 MIWDDHQSRCIGELSFRS---EVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~---~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la 232 (321)
+|||++++........+. .+.+++|+++. ++++. ++.|++||++. +.+.++..|...+..++++++++ .+++
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~-~~~~ 267 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCD-WFLA 267 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCS-SEEE
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCc-eEEE
Confidence 999998765543333322 46788998764 44443 46999999974 45667777777766666665432 3555
Q ss_pred eecCCCCcEEEEeeCCcc----eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCc------
Q 020784 233 CPGLQKGQVRVEHYASKR----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSI------ 302 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~----~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~------ 302 (321)
+|+.||.|+|||+.... +....+|...|++|+|+|+|.+|+||+.||+ |+|||+.++++...+.....
T Consensus 268 -s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~~~~ 345 (435)
T 4e54_B 268 -TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHFQHL 345 (435)
T ss_dssp -EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCCSSS
T ss_pred -EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceEEecccccccccc
Confidence 58999999999987533 2345689999999999999999999999999 99999999998877632111
Q ss_pred -ceeEEEeecCceEEEe
Q 020784 303 -SAQSGLWLSSAWLRVL 318 (321)
Q Consensus 303 -~~~~~~s~d~~~la~~ 318 (321)
.....+.+++.+++++
T Consensus 346 ~~~~~~~~~~~~~~~~~ 362 (435)
T 4e54_B 346 TPIKAAWHPRYNLIVVG 362 (435)
T ss_dssp CCCBCEECSSSSCEEEE
T ss_pred eeEEEEEcCCCCEEEEE
Confidence 1122455566666654
No 48
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=5.7e-27 Score=216.49 Aligned_cols=226 Identities=12% Similarity=0.114 Sum_probs=173.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCce-------eEEeeeecCCceEEEEEecCCC-eEEEEeCCCCCC
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE-------IFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQ 152 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~-------~~~~~~~~~~~v~~v~~~~~~~-~~~~~sg~~~~~ 152 (321)
..|...|.+++|+|+|++||+|+.++ ++||++.+... ...... |.+.+..+.+.++.. .+++++
T Consensus 105 ~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~g-h~~~v~~~~~~~~~~~~l~s~s------ 177 (380)
T 3iz6_a 105 KLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTG-HKGYASSCQYVPDQETRLITGS------ 177 (380)
T ss_dssp ECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCC-CSSCCCCCBCCSSSSSCEEEEC------
T ss_pred ecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccC-CCcceEEEEEecCCCCEEEEEC------
Confidence 45777899999999999999999855 88999864321 111111 566777777777544 466655
Q ss_pred CCCCcEEEEeCCCCcEEEEEe------eCCceeEEEEeC---CeEEEEE-CCEEEEEEcC-CcEEEEEEeccCCCCceEE
Q 020784 153 YPLNKVMIWDDHQSRCIGELS------FRSEVRSVKLRR---DRIIVVL-EQKIFVYNFA-DLKLLHQIETIANPKGLCA 221 (321)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~------~~~~v~~v~~~~---~~~~~~~-~~~I~iwd~~-~~~~~~~l~~~~~~~~~~~ 221 (321)
.|++|++||+.+++.+..+. +...|.++.+++ +.++.++ +++|++||++ ..+.++.+.+|...+..++
T Consensus 178 -~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 178 -GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVK 256 (380)
T ss_dssp -TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEE
T ss_pred -CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEE
Confidence 57999999999999887763 234789999865 3455555 5799999997 5577888888888877777
Q ss_pred EeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccc-------cceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHD-------SRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~-------~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
+++ ++.+|+ +|+.||+|++||+.++. +..+..|. ..|++++|+|+|++|++|+.||+ |+|||+.++++
T Consensus 257 ~~p--~~~~l~-s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i~vwd~~~~~~ 332 (380)
T 3iz6_a 257 FFP--DGQRFG-TGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-CYVWDTLLAEM 332 (380)
T ss_dssp ECT--TSSEEE-EECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-EEEEETTTCCE
T ss_pred Eec--CCCeEE-EEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-EEEEECCCCce
Confidence 766 457787 59999999999998765 44555443 34899999999999999999999 99999999999
Q ss_pred EEEEe---CCCcce--eEEEeecCceEEEee
Q 020784 294 LQEEC---CPSISA--QSGLWLSSAWLRVLR 319 (321)
Q Consensus 294 i~~~~---~g~~~~--~~~~s~d~~~la~~~ 319 (321)
+.++. .+|... .+.+++||++|+.+.
T Consensus 333 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 333 VLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp EEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred EEEEecccCCCCCceEEEEECCCCCEEEEee
Confidence 88874 345543 457789999998864
No 49
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=4.3e-26 Score=226.43 Aligned_cols=225 Identities=12% Similarity=0.124 Sum_probs=177.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|++||++|++|+.++ |+|||+.+++....... |.+.|..++++++++.+++++ .|++|+|
T Consensus 427 ~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s-------~D~~i~i 498 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNRQIVSAS-------RDRTIKL 498 (694)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSSCEEEEE-------TTSCEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC-CCCCEEEEEEeCCCCEEEEEe-------CCCEEEE
Confidence 56888999999999999999999865 88999998877655554 788999999999999998888 6899999
Q ss_pred EeCCCCcEEEEEe----eCCceeEEEEeCCe----EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEE
Q 020784 161 WDDHQSRCIGELS----FRSEVRSVKLRRDR----IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (321)
Q Consensus 161 WD~~~~~~~~~~~----~~~~v~~v~~~~~~----~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~l 231 (321)
||........... +...|.+++|+++. ++.++ ++.|++||+++++++.++..|...+..+++++ ++.+|
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp--dg~~l 576 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP--DGSLC 576 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT--TSSEE
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC--CCCEE
Confidence 9987554333221 33469999998753 45554 57999999999999999998877766666655 55788
Q ss_pred EeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCc---------
Q 020784 232 VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSI--------- 302 (321)
Q Consensus 232 a~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~--------- 302 (321)
+ +|+.||.|++||+.++.......+...|++++|+|++.+|++++ |+. |+|||+++++++.++.....
T Consensus 577 ~-sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 653 (694)
T 3dm0_A 577 A-SGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHG-IKIWDLESKSIVEDLKVDLKAEAEKADNS 653 (694)
T ss_dssp E-EEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTE-EEEEETTTTEEEEEECCCCC---------
T ss_pred E-EEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCC-EEEEECCCCCChhhhcccccccccccccc
Confidence 8 59999999999998766443334567899999999999888776 777 99999999999988753211
Q ss_pred -----------ceeEEEeecCceEEEee
Q 020784 303 -----------SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 303 -----------~~~~~~s~d~~~la~~~ 319 (321)
...+.+++||++|+.+.
T Consensus 654 ~~~~~~~~~~~~~~l~~spdg~~l~sgs 681 (694)
T 3dm0_A 654 GPAATKRKVIYCTSLNWSADGSTLFSGY 681 (694)
T ss_dssp -------CCCCEEEEEECTTSSEEEEEE
T ss_pred ccccCCceeEEeeeEEEcCCCCEEEEEc
Confidence 12346789999998864
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=9.7e-26 Score=202.14 Aligned_cols=225 Identities=14% Similarity=0.149 Sum_probs=176.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCce---eEEeee-ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFRE---IFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~---~~~~~~-~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
..|...|++++|+|+|++|++|+++.++||++.+.+. ...... .|...+..++++++++.+++++ .|+.
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~ 120 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-------EAST 120 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-------SSSE
T ss_pred ccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc-------CCCc
Confidence 4688899999999999999999966689999976542 112111 2578899999999999888887 6799
Q ss_pred EEEEeCCCCc--EEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEE
Q 020784 158 VMIWDDHQSR--CIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (321)
Q Consensus 158 v~iWD~~~~~--~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~l 231 (321)
|++||+++++ ....+..+ ..|.+++|+++ .++++. ++.|++||+++++.+..+..|...+..+++++ ++.++
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l 198 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN--DGTKL 198 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEE
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC--CCCEE
Confidence 9999999887 44444433 47999999875 455554 47999999999999999988766655555554 55777
Q ss_pred EeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcc--eeEEEe
Q 020784 232 VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSIS--AQSGLW 309 (321)
Q Consensus 232 a~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~--~~~~~s 309 (321)
+ +|+.||.|++||+..........|...|.+++|+|+|++|++++.|+. |++||+++++... + .++.. ..+.++
T Consensus 199 ~-~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-i~~~~~~~~~~~~-~-~~~~~~v~~~~~~ 274 (337)
T 1gxr_A 199 W-TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN-VEVLHVNKPDKYQ-L-HLHESCVLSLKFA 274 (337)
T ss_dssp E-EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEETTSSCEEE-E-CCCSSCEEEEEEC
T ss_pred E-EEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCc-EEEEECCCCCeEE-E-cCCccceeEEEEC
Confidence 7 488999999999987765555568899999999999999999999999 9999999998754 3 23433 345778
Q ss_pred ecCceEEEee
Q 020784 310 LSSAWLRVLR 319 (321)
Q Consensus 310 ~d~~~la~~~ 319 (321)
+++++|+++.
T Consensus 275 ~~~~~l~~~~ 284 (337)
T 1gxr_A 275 YCGKWFVSTG 284 (337)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEec
Confidence 8899998764
No 51
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.4e-26 Score=210.66 Aligned_cols=222 Identities=15% Similarity=0.215 Sum_probs=180.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
|.+.|++++|+|+|++|++|+.++ |+||| .+++....... |...+..++++++++.+++++ .|+.|++||
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-------~d~~i~iwd 177 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF-HRAPIVSVKWNKDGTHIISMD-------VENVTILWN 177 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC-CCSCEEEEEECTTSSEEEEEE-------TTCCEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC-CCccEEEEEECCCCCEEEEEe-------cCCeEEEEE
Confidence 567999999999999999998865 88999 45555444443 678899999999999998887 679999999
Q ss_pred CCCCcEEEEEeeCCc----------------eeEEEEeCCeEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEee
Q 020784 163 DHQSRCIGELSFRSE----------------VRSVKLRRDRIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (321)
Q Consensus 163 ~~~~~~~~~~~~~~~----------------v~~v~~~~~~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~ 224 (321)
+.+++.+..+..+.. +.++.|+++..+++. ++.|++||+.+++.+..+..|...+..+++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 257 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND 257 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence 999998887766542 888888876555443 46999999999988888888777666666665
Q ss_pred CCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC-c
Q 020784 225 GVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS-I 302 (321)
Q Consensus 225 ~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~-~ 302 (321)
+ +.+++ +|+.||.|++||+.... ...+.+|...|.+++|+|++ +|++++.||. |+|||+++++++..+.... .
T Consensus 258 ~--~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~ 332 (425)
T 1r5m_A 258 T--NKLLL-SASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALSIVDGVP 332 (425)
T ss_dssp T--TTEEE-EEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEEECTTCC
T ss_pred C--CCEEE-EEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEecccCCcc
Confidence 4 46777 48899999999988755 66888999999999999999 9999999999 9999999999999886422 2
Q ss_pred ceeEEEeecCceEEEee
Q 020784 303 SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 303 ~~~~~~s~d~~~la~~~ 319 (321)
...+.+++++++|+++.
T Consensus 333 i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 333 IFAGRISQDGQKYAVAF 349 (425)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred EEEEEEcCCCCEEEEEE
Confidence 33457788899998864
No 52
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=1.7e-26 Score=216.02 Aligned_cols=222 Identities=11% Similarity=0.127 Sum_probs=164.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCce-----------eEEeeeecC------------CceEEEEEecCC
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE-----------IFRRDFERG------------GGIGVVEMLFRC 139 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~-----------~~~~~~~~~------------~~v~~v~~~~~~ 139 (321)
+.+.|++++|+|||++||+|+.++ |+||++.+.+. ...... |. +.|..++|++++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcCCC
Confidence 456899999999999999999866 88999987652 223332 55 669999999987
Q ss_pred --CeEEEEeCCCCCCCCCCcEEEEeCCCCcEEE---------------------------------------EE--eeCC
Q 020784 140 --NILALVGGGPDPQYPLNKVMIWDDHQSRCIG---------------------------------------EL--SFRS 176 (321)
Q Consensus 140 --~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~---------------------------------------~~--~~~~ 176 (321)
..+++++ .|++|++||+.+++... .+ .+..
T Consensus 106 ~~~~l~s~s-------~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 106 NAAQFLLST-------NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp SSSEEEEEE-------CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred CcceEEEeC-------CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 6777776 67999999987654321 11 2445
Q ss_pred ceeEEEEeCC--eEEEEECCEEEEEEcC-CcEEEEEE-------eccCCCCceEEEeeCCCc-eEEEeecCCCCcEEEEe
Q 020784 177 EVRSVKLRRD--RIIVVLEQKIFVYNFA-DLKLLHQI-------ETIANPKGLCAVSQGVGS-LVLVCPGLQKGQVRVEH 245 (321)
Q Consensus 177 ~v~~v~~~~~--~~~~~~~~~I~iwd~~-~~~~~~~l-------~~~~~~~~~~~~s~~~d~-~~la~sGs~dg~V~i~d 245 (321)
.|.+++|+++ .++++.++.|++||++ ..+.+..+ ..|...+..+++ ++++ .+++ +|+.||.|++||
T Consensus 179 ~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~-s~~~dg~i~iwd 255 (447)
T 3dw8_B 179 HINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEF--HPNSCNTFV-YSSSKGTIRLCD 255 (447)
T ss_dssp CCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEE--CSSCTTEEE-EEETTSCEEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEE--CCCCCcEEE-EEeCCCeEEEEE
Confidence 7999999875 4555656799999998 44555433 344444444444 5555 6676 599999999999
Q ss_pred eCCcc-----eEEeecccc------------ceeEEEECCCCCEEEEEeCCCcEEEEEEcCC-CcEEEEEeCCCcc----
Q 020784 246 YASKR-----TKFIMAHDS------------RIACFALTQDGQLLATSSTKGTLVRIFNTLD-GTLLQEECCPSIS---- 303 (321)
Q Consensus 246 ~~~~~-----~~~l~~H~~------------~V~~vafspdg~~las~S~Dgt~IrIWd~~t-g~~i~~~~~g~~~---- 303 (321)
+.... ...+.+|.. .|++++|+|+|++|++++. ++ |+|||+++ ++++.++.. +..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~~~-~~~~~~~ 332 (447)
T 3dw8_B 256 MRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETYQV-HEYLRSK 332 (447)
T ss_dssp TTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCEES-CGGGTTT
T ss_pred CcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCccccceeec-ccccccc
Confidence 88765 478888886 9999999999999999998 88 99999997 888888853 432
Q ss_pred -------------eeEEEeecCceEEEee
Q 020784 304 -------------AQSGLWLSSAWLRVLR 319 (321)
Q Consensus 304 -------------~~~~~s~d~~~la~~~ 319 (321)
..+++++++++|+++.
T Consensus 333 l~~~~~~~~i~~~~~~~~s~~~~~l~s~s 361 (447)
T 3dw8_B 333 LCSLYENDCIFDKFECCWNGSDSVVMTGS 361 (447)
T ss_dssp HHHHHHTSGGGCCCCEEECTTSSEEEEEC
T ss_pred ccccccccccccceEEEECCCCCEEEEec
Confidence 1268899999998754
No 53
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=1.4e-25 Score=216.72 Aligned_cols=221 Identities=17% Similarity=0.215 Sum_probs=179.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|||++|++++.++ +++||....... .... |...+..+++++++..+++++ .|++|++
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~-~~~~-~~~~v~~~~~s~~g~~l~~~~-------~dg~v~~ 370 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ-TLTG-HSSSVWGVAFSPDGQTIASAS-------DDKTVKL 370 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE-EECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEEE
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE-EEeC-CCCCEEEEEECCCCCEEEEEe-------CCCEEEE
Confidence 46778999999999999999998865 889998765433 2222 577899999999999998887 6799999
Q ss_pred EeCCCCcEEEEEee-CCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 161 WDDHQSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
||. +++.+..+.. ...|.+++|+++ .++++. ++.|++||. +++.++++..|...+..++++ +|+.+|+ +++
T Consensus 371 ~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s--~d~~~l~-~~~ 445 (577)
T 2ymu_A 371 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS--PDDQTIA-SAS 445 (577)
T ss_dssp EET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEEC--TTSSEEE-EEE
T ss_pred EcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEEC--CCCCEEE-EEc
Confidence 995 5566666654 458999999876 355554 469999995 567788888887765555555 4567888 489
Q ss_pred CCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce--eEEEeecCce
Q 020784 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA--QSGLWLSSAW 314 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~--~~~~s~d~~~ 314 (321)
.||.|++|+...+.+..+.+|...|++++|+|+|++||+++.|++ |+||| .+|++++++. +|... .++|++||++
T Consensus 446 ~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~-i~iw~-~~~~~~~~~~-~h~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 446 DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWN-RNGQLLQTLT-GHSSSVRGVAFSPDGQT 522 (577)
T ss_dssp TTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-EEEEE-TTSCEEEEEE-CCSSCEEEEEECTTSSC
T ss_pred CCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEEc-CCCCEEEEEe-CCCCCEEEEEEcCCCCE
Confidence 999999999877778899999999999999999999999999999 99999 5789999885 55543 4578899999
Q ss_pred EEEee
Q 020784 315 LRVLR 319 (321)
Q Consensus 315 la~~~ 319 (321)
||++.
T Consensus 523 l~s~~ 527 (577)
T 2ymu_A 523 IASAS 527 (577)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98864
No 54
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=5.1e-26 Score=203.07 Aligned_cols=198 Identities=11% Similarity=0.071 Sum_probs=153.4
Q ss_pred CCCCCCeEEEEEcC--CCCEEEEEcCCc-EEEEEecCCc--eeEEeeeecCCceEEEEEecC--CCeEEEEeCCCCCCCC
Q 020784 82 SSPPPTLLHISFNQ--DHGCFAAGTDHG-FRIYNCDPFR--EIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQYP 154 (321)
Q Consensus 82 ~~~~~~V~~v~fs~--dg~~lasg~~~g-v~vw~~~~~~--~~~~~~~~~~~~v~~v~~~~~--~~~~~~~sg~~~~~~~ 154 (321)
..|.+.|++++|++ +|++||+|+.|+ |+|||+.+++ ....... |...|..++++++ +..+++++ .
T Consensus 50 ~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s-------~ 121 (297)
T 2pm7_B 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVAS-------S 121 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEE-------T
T ss_pred ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEE-------C
Confidence 56888999999986 489999998755 8899998764 2223332 6788999999887 67788777 6
Q ss_pred CCcEEEEeCCCCcE--EEEEe-eCCceeEEEEeCC---------------eEEEEE-CCEEEEEEcCCcE----EEEEEe
Q 020784 155 LNKVMIWDDHQSRC--IGELS-FRSEVRSVKLRRD---------------RIIVVL-EQKIFVYNFADLK----LLHQIE 211 (321)
Q Consensus 155 d~~v~iWD~~~~~~--~~~~~-~~~~v~~v~~~~~---------------~~~~~~-~~~I~iwd~~~~~----~~~~l~ 211 (321)
|++|++||++++.. ...+. +...|.++.|+++ .+++++ +++|++||+++++ ++.++.
T Consensus 122 d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~ 201 (297)
T 2pm7_B 122 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 201 (297)
T ss_dssp TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec
Confidence 89999999987631 22333 4457999999875 455555 5699999997654 667888
Q ss_pred ccCCCCceEEEeeCC-CceEEEeecCCCCcEEEEeeCCcc----eEEe--eccccceeEEEECCCCCEEEEEeCCCcEEE
Q 020784 212 TIANPKGLCAVSQGV-GSLVLVCPGLQKGQVRVEHYASKR----TKFI--MAHDSRIACFALTQDGQLLATSSTKGTLVR 284 (321)
Q Consensus 212 ~~~~~~~~~~~s~~~-d~~~la~sGs~dg~V~i~d~~~~~----~~~l--~~H~~~V~~vafspdg~~las~S~Dgt~Ir 284 (321)
+|...+..+++++++ .+.+|| +|+.||+|+||+..... ...+ ..|...|.+++|+|+|++||+++.||+ |+
T Consensus 202 ~H~~~V~~v~~sp~~~~~~~la-s~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~-v~ 279 (297)
T 2pm7_B 202 GHSDWVRDVAWSPTVLLRSYMA-SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-VT 279 (297)
T ss_dssp CCSSCEEEEEECCCCSSSEEEE-EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC-EE
T ss_pred CCCCceEEEEECCCCCCceEEE-EEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc-EE
Confidence 888777777777653 236777 69999999999987632 2234 578899999999999999999999999 99
Q ss_pred EEEcC
Q 020784 285 IFNTL 289 (321)
Q Consensus 285 IWd~~ 289 (321)
||+..
T Consensus 280 lw~~~ 284 (297)
T 2pm7_B 280 LWKEN 284 (297)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99987
No 55
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=9.9e-26 Score=207.30 Aligned_cols=204 Identities=11% Similarity=0.090 Sum_probs=162.4
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCc-EEEEEecCCceeEEeee-ecCCceEEEEEec-CCCeEEEEeCCCCCCCCCCc
Q 020784 82 SSPPPTLLHISFNQDH-GCFAAGTDHG-FRIYNCDPFREIFRRDF-ERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg-~~lasg~~~g-v~vw~~~~~~~~~~~~~-~~~~~v~~v~~~~-~~~~~~~~sg~~~~~~~d~~ 157 (321)
..|...|++++|+|+| ++|++|+.++ |+|||+.+.+....... .|.+.|..+++++ +++.+++++ .|++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~d~~ 142 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS-------IRGA 142 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE-------TTTE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe-------CCCE
Confidence 5678899999999999 9999998865 88999998776655542 2678899999998 667777777 6799
Q ss_pred EEEEeCCCCcEEEEEee-C---CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCce-
Q 020784 158 VMIWDDHQSRCIGELSF-R---SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL- 229 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~~-~---~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~- 229 (321)
|++||++.. .+..+.. . ..|.+++|+++ .++++. ++.|++||+ +++.+..+..|...+..++++++ +.
T Consensus 143 i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~--~~~ 218 (383)
T 3ei3_B 143 TTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPR--CDW 218 (383)
T ss_dssp EEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSS--CTT
T ss_pred EEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCC--CCC
Confidence 999999864 4444432 2 46999999875 455554 479999999 56788888888776666666554 45
Q ss_pred EEEeecCCCCcEEEEeeCC----cceEEeeccccceeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 230 VLVCPGLQKGQVRVEHYAS----KRTKFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~~----~~~~~l~~H~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
+++ +|+.||.|++||+.. .......+|...|++++|+| +|.+|++++.|++ |+|||+++++++.++.
T Consensus 219 ~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 219 LMA-TSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQII 290 (383)
T ss_dssp EEE-EEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEE
T ss_pred EEE-EEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCccccccc
Confidence 666 589999999999986 44444448999999999999 9999999999999 9999999998776664
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=4.2e-25 Score=208.19 Aligned_cols=223 Identities=11% Similarity=0.162 Sum_probs=181.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEecCCceeEEeeeecCCceEEEEEec--CCCeEEEEeCCCCCCCCCCcE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLF--RCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~-gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~sg~~~~~~~d~~v 158 (321)
..|.+.|++++|++++ +|++|+.+ .|+|||+.+++....... |.+.+.++++.+ +++.+++++ .|++|
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~l~s~s-------~d~~i 229 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIVTGS-------RDNTL 229 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSCEEEEEEE-------TTSCE
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCCCEEEEEc-------CCCcE
Confidence 4688999999999999 77777775 488999999887665554 688999999885 445666666 67999
Q ss_pred EEEeCCCCcE-----------------------EEEEe-eCCceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEecc
Q 020784 159 MIWDDHQSRC-----------------------IGELS-FRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETI 213 (321)
Q Consensus 159 ~iWD~~~~~~-----------------------~~~~~-~~~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~ 213 (321)
++||+.++.. +..+. +...|.++..+.+.++++. ++.|++||+++++.+..+..|
T Consensus 230 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 230 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp EEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 9999987653 22232 2346788888888888876 569999999999999999888
Q ss_pred CCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCc
Q 020784 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (321)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~ 292 (321)
...+..+++++ ++..++ +|+.||.|++||+.++. +.++.+|...|++++|+ +.+|++|+.||+ |+|||+.+++
T Consensus 310 ~~~v~~~~~~~--~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~vwd~~~~~ 383 (464)
T 3v7d_B 310 TDRIYSTIYDH--ERKRCI-SASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRGWDANDYS 383 (464)
T ss_dssp SSCEEEEEEET--TTTEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEEEETTTCC
T ss_pred CCCEEEEEEcC--CCCEEE-EEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEEEECCCCc
Confidence 77666666655 557777 59999999999997655 66899999999999997 589999999999 9999999999
Q ss_pred EEEEEeCCCcceeEEEeecCceEEEee
Q 020784 293 LLQEECCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 293 ~i~~~~~g~~~~~~~~s~d~~~la~~~ 319 (321)
....+..........+++++++|+++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 384 RKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred eeeeecCCCCccEEEEEeCCCEEEEec
Confidence 888887666667779999999998753
No 57
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=2.2e-25 Score=205.09 Aligned_cols=201 Identities=13% Similarity=0.157 Sum_probs=162.0
Q ss_pred cCCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEecCCceeEEeee------------ecCCceEEEEEec-CCCeEEEE
Q 020784 81 SSSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDF------------ERGGGIGVVEMLF-RCNILALV 145 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~-dg~~lasg~~~g-v~vw~~~~~~~~~~~~~------------~~~~~v~~v~~~~-~~~~~~~~ 145 (321)
...|.+.|++++|+| +|++|++|+.++ |+|||+.+.+....... .|.+.|..+++++ +++.++++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 356888999999999 999999998766 88999987654322220 1578899999988 66778777
Q ss_pred eCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCC-----eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCce
Q 020784 146 GGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD-----RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGL 219 (321)
Q Consensus 146 sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~-----~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~ 219 (321)
+ .|+.|++||+.+++.+..+.+...+.++.+.+. .++++. ++.|++||+++++.+..+..|...+..
T Consensus 119 ~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 119 S-------FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILA 191 (408)
T ss_dssp E-------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEE
T ss_pred e-------CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEE
Confidence 7 679999999999999999988889999998763 455554 469999999999999999888776666
Q ss_pred EEEeeCCCce-EEEeecCCCCcEEEEeeCCcc--eEEe---------------eccccceeEEEECCCCCEEEEEeCCCc
Q 020784 220 CAVSQGVGSL-VLVCPGLQKGQVRVEHYASKR--TKFI---------------MAHDSRIACFALTQDGQLLATSSTKGT 281 (321)
Q Consensus 220 ~~~s~~~d~~-~la~sGs~dg~V~i~d~~~~~--~~~l---------------~~H~~~V~~vafspdg~~las~S~Dgt 281 (321)
++++++ +. +++ +|+.||.|++||+.... +..+ .+|...|++++|+|+|++|++++.||.
T Consensus 192 ~~~~~~--~~~ll~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 192 VSWSPR--YDYILA-TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEECSS--CTTEEE-EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEECCC--CCcEEE-EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 666654 44 455 58999999999986542 3333 679999999999999999999999999
Q ss_pred EEEEEEcCCCc
Q 020784 282 LVRIFNTLDGT 292 (321)
Q Consensus 282 ~IrIWd~~tg~ 292 (321)
|+|||+.+++
T Consensus 269 -i~vwd~~~~~ 278 (408)
T 4a11_B 269 -MRLWNSSNGE 278 (408)
T ss_dssp -EEEEETTTCC
T ss_pred -EEEEECCCCc
Confidence 9999987653
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=7.3e-26 Score=208.40 Aligned_cols=205 Identities=15% Similarity=0.153 Sum_probs=163.8
Q ss_pred CCCCCCeEEEEEcCC----C---CEEEEEcCCc-EEEEEecCCce-----eEEeeeec-----CCceEEEEEe----cCC
Q 020784 82 SSPPPTLLHISFNQD----H---GCFAAGTDHG-FRIYNCDPFRE-----IFRRDFER-----GGGIGVVEML----FRC 139 (321)
Q Consensus 82 ~~~~~~V~~v~fs~d----g---~~lasg~~~g-v~vw~~~~~~~-----~~~~~~~~-----~~~v~~v~~~----~~~ 139 (321)
..|...|++++|+++ | ++|++|+.++ |++|++.+.+. ...... | .+.+..++++ +++
T Consensus 59 ~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~ 137 (397)
T 1sq9_A 59 FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDL-LDSDMKKHSFWALKWGASNDRLL 137 (397)
T ss_dssp ECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECC-SCTTGGGSCEEEEEEECCC----
T ss_pred ecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecc-cccccCCCcEEEEEEeeccCCCC
Confidence 467789999999999 9 9999988755 88999987764 444443 4 4789999999 888
Q ss_pred Ce-EEEEeCCCCCCCCCCcEEEEeCCC------CcEEE-----EEee--------CCceeEEEEeCCe-EEEEE-CCEEE
Q 020784 140 NI-LALVGGGPDPQYPLNKVMIWDDHQ------SRCIG-----ELSF--------RSEVRSVKLRRDR-IIVVL-EQKIF 197 (321)
Q Consensus 140 ~~-~~~~sg~~~~~~~d~~v~iWD~~~------~~~~~-----~~~~--------~~~v~~v~~~~~~-~~~~~-~~~I~ 197 (321)
+. +++++ .|+.|++||+.+ ++.+. .+.. ...|.+++|+++. ++++. ++.|+
T Consensus 138 ~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~ 210 (397)
T 1sq9_A 138 SHRLVATD-------VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQ 210 (397)
T ss_dssp CEEEEEEE-------TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEE
T ss_pred ceEEEEEe-------CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEE
Confidence 88 87777 679999999988 65544 5542 4579999999875 33333 46999
Q ss_pred EEEcCCcEEEEEEec---c---CCCCceEEEeeCCCceEEEeecCCC---CcEEEEeeCCcc-eEEeec-----------
Q 020784 198 VYNFADLKLLHQIET---I---ANPKGLCAVSQGVGSLVLVCPGLQK---GQVRVEHYASKR-TKFIMA----------- 256 (321)
Q Consensus 198 iwd~~~~~~~~~l~~---~---~~~~~~~~~s~~~d~~~la~sGs~d---g~V~i~d~~~~~-~~~l~~----------- 256 (321)
+||+++++.+..+.. | ...+..+++++ ++.+|++ |+.| |.|++||+.... +..+.+
T Consensus 211 i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~--~~~~l~~-~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 287 (397)
T 1sq9_A 211 ISELSTLRPLYNFESQHSMINNSNSIRSVKFSP--QGSLLAI-AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGE 287 (397)
T ss_dssp EEETTTTEEEEEEECCC---CCCCCEEEEEECS--STTEEEE-EEEETTEEEEEEEETTTCCEEEEECBC--------CC
T ss_pred EEECCCCceeEEEeccccccccCCccceEEECC--CCCEEEE-EecCCCCceEEEEECCCCcccceeccCcccccccccc
Confidence 999999999999988 6 55555555554 5577774 8888 999999987655 668888
Q ss_pred --cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 257 --HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 257 --H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
|...|++++|+|+|++||+++.||+ |+|||+++++++.++.
T Consensus 288 ~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 288 FAHSSWVMSLSFNDSGETLCSAGWDGK-LRFWDVKTKERITTLN 330 (397)
T ss_dssp BSBSSCEEEEEECSSSSEEEEEETTSE-EEEEETTTTEEEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCceeEEEe
Confidence 9999999999999999999999999 9999999999999997
No 59
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=4.8e-25 Score=196.48 Aligned_cols=222 Identities=14% Similarity=0.108 Sum_probs=166.6
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCC
Q 020784 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (321)
Q Consensus 88 V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~ 166 (321)
+++|+||+++ +||+|.++.|+|||+++++.+....+. |...|.+++++++++.+++++ .|++|++||++++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs-------~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-------SSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------TTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE-------CCCcEEEeecCCc
Confidence 4679999987 899999999999999999876655542 556799999999999998888 7899999999999
Q ss_pred cEEEEEeeCC-ceeEE-----------------------------------------EEeCC--eEEEEE-CCEEEEEEc
Q 020784 167 RCIGELSFRS-EVRSV-----------------------------------------KLRRD--RIIVVL-EQKIFVYNF 201 (321)
Q Consensus 167 ~~~~~~~~~~-~v~~v-----------------------------------------~~~~~--~~~~~~-~~~I~iwd~ 201 (321)
+.+..+..+. .+.++ .+.++ .++.+. ++.|++||+
T Consensus 100 ~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred eeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 8877655432 22222 22221 233443 468999998
Q ss_pred CCcEE----EEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEe
Q 020784 202 ADLKL----LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS 277 (321)
Q Consensus 202 ~~~~~----~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S 277 (321)
++++. ......+...+..+.+++.....+...+|+.++.|++|+...........|...|..++|++++..+++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEE
Confidence 76542 22333344444555666555444444578999999999998887777778889999999999999887765
Q ss_pred --CCCcEEEEEEcCCCcEEEEEeCCCcceeE--EEeecCceEEEee
Q 020784 278 --TKGTLVRIFNTLDGTLLQEECCPSISAQS--GLWLSSAWLRVLR 319 (321)
Q Consensus 278 --~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~--~~s~d~~~la~~~ 319 (321)
.|++ |+|||+++++++++++ +|...+. ++++||++|+.+.
T Consensus 260 g~~d~~-i~iwd~~~~~~~~~l~-gH~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 260 GFAQNQ-LVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp CTTTCC-EEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSCEEEEE
T ss_pred EcCCCE-EEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEe
Confidence 7999 9999999999999994 6765544 6778899998764
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=5.6e-25 Score=204.20 Aligned_cols=226 Identities=12% Similarity=0.114 Sum_probs=176.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|+|++|++|+.++ |+|||+.+.+....... |.+.+..+.+ +++.+++++ .|+.|++
T Consensus 131 ~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~-------~dg~i~i 200 (401)
T 4aez_A 131 TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSW--NRHVLSSGS-------RSGAIHH 200 (401)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEE--ETTEEEEEE-------TTSEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEE--CCCEEEEEc-------CCCCEEE
Confidence 34778999999999999999998765 88999998887666554 6777887776 567787777 6799999
Q ss_pred EeCC-CCcEEEEEee-CCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe-e
Q 020784 161 WDDH-QSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC-P 234 (321)
Q Consensus 161 WD~~-~~~~~~~~~~-~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~-s 234 (321)
||++ .+..+..+.. ...|.+++|+++ .+++++ ++.|++||+++++.+..+..|...+..+++++++.. ++++ +
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-ll~~~~ 279 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSN-LLATGG 279 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTT-EEEEEC
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCC-EEEEec
Confidence 9998 4555666654 458999999875 455555 479999999999999999888888888888876543 4442 2
Q ss_pred cCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEe--CCCcEEEEEEcCCCcEEEEEe-CCCcc--eeEEEe
Q 020784 235 GLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS--TKGTLVRIFNTLDGTLLQEEC-CPSIS--AQSGLW 309 (321)
Q Consensus 235 Gs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S--~Dgt~IrIWd~~tg~~i~~~~-~g~~~--~~~~~s 309 (321)
|+.||.|++||+.++.......|...|++++|+|+|++|++++ .||. |+|||+.+++...... .+|.. ..+.++
T Consensus 280 gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 280 GTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp CTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 4489999999998766443335778999999999999999954 8999 9999999987765542 34443 345778
Q ss_pred ecCceEEEee
Q 020784 310 LSSAWLRVLR 319 (321)
Q Consensus 310 ~d~~~la~~~ 319 (321)
+++++|+++.
T Consensus 359 ~dg~~l~s~~ 368 (401)
T 4aez_A 359 PDGRILSTAA 368 (401)
T ss_dssp TTSSEEEEEC
T ss_pred CCCCEEEEEe
Confidence 8999998864
No 61
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=3.4e-26 Score=207.45 Aligned_cols=222 Identities=13% Similarity=0.106 Sum_probs=175.7
Q ss_pred CCCCeEEEEEcCC----CCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEec-CCCeEEEEeCCCCCCCCCCc
Q 020784 84 PPPTLLHISFNQD----HGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 84 ~~~~V~~v~fs~d----g~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~sg~~~~~~~d~~ 157 (321)
|...|++++|+++ |++|++|+.++ |+|||+.+.+....... |.+.|..+++++ +++.+++++ .|+.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~-------~dg~ 139 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLSVS-------KDHA 139 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEEEE-------TTSC
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEEEe-------CCCe
Confidence 6678999999999 67999998866 88999998887665553 688999999998 788888877 6799
Q ss_pred EEEEeCCCCcEEEEE----eeCCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEec------------------
Q 020784 158 VMIWDDHQSRCIGEL----SFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIET------------------ 212 (321)
Q Consensus 158 v~iWD~~~~~~~~~~----~~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~------------------ 212 (321)
|++||+++++.+..+ .+...|.+++|+++ .++++. ++.|++||+++++.+..+..
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 999999999988887 35568999999875 455554 57999999987765443332
Q ss_pred ----------cCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCc---------------ceEEeeccccceeEEEEC
Q 020784 213 ----------IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK---------------RTKFIMAHDSRIACFALT 267 (321)
Q Consensus 213 ----------~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~---------------~~~~l~~H~~~V~~vafs 267 (321)
|...+..++++ + .+++ +|+.||.|++||.... .+..+.+|...|++++|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~--~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--G--DLIL-SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--T--TEEE-EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred ccCccccccCCcceEEEEEEc--C--CEEE-EEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 66666666666 2 4666 4899999999998753 245788999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEEEcCCCc----EEEEEeCC---CcceeEEEeecCceEEEee
Q 020784 268 QD--GQLLATSSTKGTLVRIFNTLDGT----LLQEECCP---SISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 268 pd--g~~las~S~Dgt~IrIWd~~tg~----~i~~~~~g---~~~~~~~~s~d~~~la~~~ 319 (321)
|+ |++||+|+.||. |+|||+.+++ .+.++... .....+.+++++++|+++.
T Consensus 295 ~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 295 MDFWQKMLALGNQVGK-LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC 354 (366)
T ss_dssp ECTTSSEEEEECTTSC-EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCcEEEEEecCCc-EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe
Confidence 99 999999999999 9999999986 44466432 2233457788999998864
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=1.1e-25 Score=207.21 Aligned_cols=224 Identities=13% Similarity=0.206 Sum_probs=175.2
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCc------eeEEeeeecCCceEEEEEecC----C---CeEEEEe
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR------EIFRRDFERGGGIGVVEMLFR----C---NILALVG 146 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~------~~~~~~~~~~~~v~~v~~~~~----~---~~~~~~s 146 (321)
...|.+.|++++|+| ++|++|+.++ |+||++++.+ ....... |...|..++++++ + +.+++++
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEEEc
Confidence 357889999999999 7888888765 8899998877 4444443 6888999999988 7 8888877
Q ss_pred CCCCCCCCCCcEEEEeCCCCcE-----EEEEeeC------CceeEEEEe----CC--e-EEEEE-CCEEEEEEcCC----
Q 020784 147 GGPDPQYPLNKVMIWDDHQSRC-----IGELSFR------SEVRSVKLR----RD--R-IIVVL-EQKIFVYNFAD---- 203 (321)
Q Consensus 147 g~~~~~~~d~~v~iWD~~~~~~-----~~~~~~~------~~v~~v~~~----~~--~-~~~~~-~~~I~iwd~~~---- 203 (321)
.|+.|++||+.+++. +..+..+ ..|.+++|+ ++ . ++++. ++.|++||+.+
T Consensus 89 -------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 89 -------FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp -------TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred -------CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 679999999988875 6666655 789999999 54 4 55554 47999999988
Q ss_pred --cEEEE-----EEec-------cCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeec---c---cccee
Q 020784 204 --LKLLH-----QIET-------IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA---H---DSRIA 262 (321)
Q Consensus 204 --~~~~~-----~l~~-------~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~---H---~~~V~ 262 (321)
++.+. ++.. +...+..++++ +++ +++ +|+.||.|++||+.... +..+.. | ...|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~-~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS--ERG-LIA-TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC--TTS-EEE-EECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEEC--CCc-eEE-EEeCCCcEEEEECCCCceeEEEeccccccccCCccc
Confidence 66666 6643 44445555554 456 666 58999999999998655 567888 9 99999
Q ss_pred EEEECCCCCEEEEEeCC---CcEEEEEEcCCCcEEEEEeCC------------Ccce--eEEEeecCceEEEee
Q 020784 263 CFALTQDGQLLATSSTK---GTLVRIFNTLDGTLLQEECCP------------SISA--QSGLWLSSAWLRVLR 319 (321)
Q Consensus 263 ~vafspdg~~las~S~D---gt~IrIWd~~tg~~i~~~~~g------------~~~~--~~~~s~d~~~la~~~ 319 (321)
+++|+|++.+|++++.| |. |+|||+++++++.++... +... .+.+++++++|+++.
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred eEEECCCCCEEEEEecCCCCce-EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 99999999999999999 99 999999999999998531 4433 447778899998864
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=8.2e-25 Score=203.11 Aligned_cols=221 Identities=13% Similarity=0.042 Sum_probs=179.8
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCC
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~ 166 (321)
.+.+++|++ +.+++++.++.|+|||+.+++........|.+.+..++++++++.+++++ .|+.|++||+.++
T Consensus 95 ~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~-------~dg~i~iwd~~~~ 166 (401)
T 4aez_A 95 YLNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL-------GNGLVDIYDVESQ 166 (401)
T ss_dssp TCBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE-------TTSCEEEEETTTC
T ss_pred eEEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC-------CCCeEEEEECcCC
Confidence 466677876 44566666677999999998876655543577899999999999998887 6799999999999
Q ss_pred cEEEEEeeC-CceeEEEEeCCeEEEEEC-CEEEEEEcC-CcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEE
Q 020784 167 RCIGELSFR-SEVRSVKLRRDRIIVVLE-QKIFVYNFA-DLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRV 243 (321)
Q Consensus 167 ~~~~~~~~~-~~v~~v~~~~~~~~~~~~-~~I~iwd~~-~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i 243 (321)
+.+..+..+ ..|.++.|+++.+++++. +.|++||++ ....+..+..|...+..++++ +++.+++ +|+.||.|++
T Consensus 167 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~-s~~~d~~v~i 243 (401)
T 4aez_A 167 TKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR--SDGLQLA-SGGNDNVVQI 243 (401)
T ss_dssp CEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC--TTSSEEE-EEETTSCEEE
T ss_pred eEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc--CCCCEEE-EEeCCCeEEE
Confidence 988888644 589999999988888764 699999998 567778888877665555554 4667888 4899999999
Q ss_pred EeeCCcc-eEEeeccccceeEEEECCCC-CEEEEEe--CCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEEee
Q 020784 244 EHYASKR-TKFIMAHDSRIACFALTQDG-QLLATSS--TKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 244 ~d~~~~~-~~~l~~H~~~V~~vafspdg-~~las~S--~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~~~ 319 (321)
||+.... ...+..|...|.+++|+|++ .++++|+ .|++ |++||+.+++++.++..+.....+.+++++++|+++.
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEe
Confidence 9998755 56888999999999999976 5677765 7999 9999999999999998666666778899999998853
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.7e-26 Score=211.45 Aligned_cols=224 Identities=13% Similarity=0.149 Sum_probs=174.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecC----CceeEEeeeecCCceEEEEEecC-CCeEEEEeCCCCCCCCCC
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDP----FREIFRRDFERGGGIGVVEMLFR-CNILALVGGGPDPQYPLN 156 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~----~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~sg~~~~~~~d~ 156 (321)
.|...|++++|+|+|++|++|+.++ |+||++.. .+....... |.+.|..++++++ ++.+++++ .|+
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~-------~dg 136 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGG-------NNG 136 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEEC-------SSS
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEc-------CCC
Confidence 4677999999999999999998755 88999987 233333333 6788999999987 77777776 679
Q ss_pred cEEEEeCCCCc------EEEEE----eeCCceeEEEEeCC---eEEEEE-CCEEEEEEcCCcEEEEEEecc------CCC
Q 020784 157 KVMIWDDHQSR------CIGEL----SFRSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETI------ANP 216 (321)
Q Consensus 157 ~v~iWD~~~~~------~~~~~----~~~~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l~~~------~~~ 216 (321)
+|++||+.+++ ....+ .+...|.+++|+++ .++++. ++.|++||+++++.+..+..+ ...
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 216 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQ 216 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCC
T ss_pred eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCc
Confidence 99999998876 32222 24457999999976 344443 569999999999999988876 344
Q ss_pred CceEEEeeCCCc-eEEEeecCCCC---cEEEEeeCCc--ceEEee-ccccceeEEEECC-CCCEEEEEeCCCcEEEEEEc
Q 020784 217 KGLCAVSQGVGS-LVLVCPGLQKG---QVRVEHYASK--RTKFIM-AHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNT 288 (321)
Q Consensus 217 ~~~~~~s~~~d~-~~la~sGs~dg---~V~i~d~~~~--~~~~l~-~H~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~ 288 (321)
+..+++++ ++ .+++ +|+.|| .|++||+... .+..+. +|...|++++|+| ++.+|++++.||+ |+|||+
T Consensus 217 v~~~~~~~--~~~~~l~-~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~ 292 (416)
T 2pm9_A 217 LSVVEWHP--KNSTRVA-TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNP 292 (416)
T ss_dssp EEEEEECS--SCTTEEE-EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECS
T ss_pred eEEEEECC--CCCCEEE-EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeC
Confidence 44455554 43 4555 488888 9999999864 456787 9999999999999 9999999999999 999999
Q ss_pred CCCcEEEEEeCCCc--ceeEEEeecC-ceEEEee
Q 020784 289 LDGTLLQEECCPSI--SAQSGLWLSS-AWLRVLR 319 (321)
Q Consensus 289 ~tg~~i~~~~~g~~--~~~~~~s~d~-~~la~~~ 319 (321)
++++++.++. ++. ...+.+++++ ++|+++.
T Consensus 293 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 293 ESAEQLSQFP-ARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp SSCCEEEEEE-CSSSCCCCEEECTTCTTEEEECC
T ss_pred CCCccceeec-CCCCceEEEEECCCCCCEEEEEe
Confidence 9999999986 333 3345788888 7887753
No 65
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-25 Score=229.08 Aligned_cols=201 Identities=8% Similarity=0.117 Sum_probs=162.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|||++||+|+.++ |+||+....+...... |.+.|..+++++ +..+++++ .|++|+|
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~--~~~~V~~l~fsp-g~~L~S~s-------~D~~v~l 83 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE--DRSAIKEMRFVK-GIYLVVIN-------AKDTVYV 83 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS--SCCCEEEEEEET-TTEEEEEE-------TTCEEEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC--CCCCEEEEEEcC-CCEEEEEE-------CcCeEEE
Confidence 46788999999999999999999865 8899988776544433 567899999998 77777777 6799999
Q ss_pred EeCCCCcEEEEEeeCCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEE-----------EEEeccCCCCceEEEeeCC
Q 020784 161 WDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLL-----------HQIETIANPKGLCAVSQGV 226 (321)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~-----------~~l~~~~~~~~~~~~s~~~ 226 (321)
||+++++++..+.++..|.+++|+++ .++++. ++.|++||+.++++. ..+..|..++..++++++.
T Consensus 84 Wd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 84 LSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp EETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred EECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC
Confidence 99999999988888889999999976 455554 579999999988764 1123455566666776642
Q ss_pred CceEEEeecCCCCcEEEEeeCCcc-eEEeecc------------------ccceeEEEECCCCCEEEEEeCCCcEEEEEE
Q 020784 227 GSLVLVCPGLQKGQVRVEHYASKR-TKFIMAH------------------DSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (321)
Q Consensus 227 d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H------------------~~~V~~vafspdg~~las~S~Dgt~IrIWd 287 (321)
+..++ +|+.||.| +||+..+. +..+..| ...|++++|+|+|.+||||+.||+ |+|||
T Consensus 164 -~~~l~-~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i~lWd 239 (902)
T 2oaj_A 164 -IGTVL-ISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-LVFWD 239 (902)
T ss_dssp -EEEEE-EECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-EEEEE
T ss_pred -CCEEE-EEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-EEEEE
Confidence 34555 48999999 99998765 4466655 578999999999999999999999 99999
Q ss_pred cCCCcEEEE
Q 020784 288 TLDGTLLQE 296 (321)
Q Consensus 288 ~~tg~~i~~ 296 (321)
+++|+++..
T Consensus 240 ~~~g~~~~~ 248 (902)
T 2oaj_A 240 ANSGHMIMA 248 (902)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEE
Confidence 999998864
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=4.2e-25 Score=204.83 Aligned_cols=224 Identities=13% Similarity=0.158 Sum_probs=172.4
Q ss_pred cCCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEecCC-------ceeEEeeeecCCceEEEEEecCC-CeEEEEeCCCC
Q 020784 81 SSSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPF-------REIFRRDFERGGGIGVVEMLFRC-NILALVGGGPD 150 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~-dg~~lasg~~~g-v~vw~~~~~-------~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~sg~~~ 150 (321)
...|.+.|++++|+| ++++|++|+.++ |+|||+.+. +....... |.+.|..+++++++ +.+++++
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~---- 151 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAG---- 151 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEE----
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEEEEc----
Confidence 356888999999999 999999999866 889999876 33334443 68899999999987 5777777
Q ss_pred CCCCCCcEEEEeCCCCcEEEEE--e-eCCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEE-eccCCC-CceEEE
Q 020784 151 PQYPLNKVMIWDDHQSRCIGEL--S-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQI-ETIANP-KGLCAV 222 (321)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~~~--~-~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l-~~~~~~-~~~~~~ 222 (321)
.|++|+|||+++++.+..+ . +...|.+++|+++ .++++. ++.|++||+++++.+..+ ..|... ...+.+
T Consensus 152 ---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 152 ---CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp ---TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred ---CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 6799999999999988887 3 4558999999875 455554 579999999999999998 566543 344555
Q ss_pred eeCCCceEEEeec---CCCCcEEEEeeCCcc--eEEe-eccccceeEEEECCCCCEEE-EEeCCCcEEEEEEcCCCc---
Q 020784 223 SQGVGSLVLVCPG---LQKGQVRVEHYASKR--TKFI-MAHDSRIACFALTQDGQLLA-TSSTKGTLVRIFNTLDGT--- 292 (321)
Q Consensus 223 s~~~d~~~la~sG---s~dg~V~i~d~~~~~--~~~l-~~H~~~V~~vafspdg~~la-s~S~Dgt~IrIWd~~tg~--- 292 (321)
+ +++.++++ | +.||.|++||..... +... ..|...|.+++|+|+|.+|+ +|+.||+ |+|||+.+++
T Consensus 229 ~--~~~~~l~~-g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~-i~i~d~~~~~~~~ 304 (402)
T 2aq5_A 229 V--SEGKILTT-GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS-IRYFEITSEAPFL 304 (402)
T ss_dssp C--STTEEEEE-EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC-EEEEEECSSTTCE
T ss_pred c--CCCcEEEE-eccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe-EEEEEecCCCcce
Confidence 5 45688874 7 789999999987643 3333 35788899999999999986 5557999 9999999988
Q ss_pred -EEEEEeCCCcceeEEEeecCceEE
Q 020784 293 -LLQEECCPSISAQSGLWLSSAWLR 316 (321)
Q Consensus 293 -~i~~~~~g~~~~~~~~s~d~~~la 316 (321)
.+..+........+.+++++.+++
T Consensus 305 ~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 305 HYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EEEEEECCSSCCSEEEECCGGGSCG
T ss_pred EeecccccCCcccceEEecccccce
Confidence 333343223344567888887764
No 67
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=3.9e-25 Score=207.43 Aligned_cols=216 Identities=12% Similarity=0.180 Sum_probs=175.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iW 161 (321)
.|...|+|++| ||++|++|+.++ |+|||+.+++....... |.+.|.++++ +++.+++++ .|++|++|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~sg~-------~dg~i~vw 198 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY--DERVIITGS-------SDSTVRVW 198 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC--CSSEEEEEE-------TTSCEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE--CCCEEEEEc-------CCCeEEEE
Confidence 45567999887 799999998865 88999999887666554 5677766654 788888877 67999999
Q ss_pred eCCCCcEEEEEeeC-CceeEEEEeCCeEEEEEC-CEEEEEEcCCcEEE---EEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 162 DDHQSRCIGELSFR-SEVRSVKLRRDRIIVVLE-QKIFVYNFADLKLL---HQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 162 D~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~~-~~I~iwd~~~~~~~---~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
|+.+++.+..+..+ ..|.++.|+++.+++++. +.|++||+.+++.+ ..+..|...+ .++.++ +.+++ +|+
T Consensus 199 d~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v--~~~~~~--~~~l~-s~~ 273 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV--NVVDFD--DKYIV-SAS 273 (435)
T ss_dssp ESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCE--EEEEEE--TTEEE-EEE
T ss_pred ECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcE--EEEEeC--CCEEE-EEe
Confidence 99999998888654 479999999988888764 69999999876554 5556665544 444443 36676 489
Q ss_pred CCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceE
Q 020784 237 QKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWL 315 (321)
Q Consensus 237 ~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~l 315 (321)
.||.|++||..+.. +..+.+|...|.+++| ++.+|++|+.||+ |+|||+++++++.++. +|...+.++.+++.+|
T Consensus 274 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~l 349 (435)
T 1p22_A 274 GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT-IRLWDIECGACLRVLE-GHEELVRCIRFDNKRI 349 (435)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEEC-CCSSCEEEEECCSSEE
T ss_pred CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-EEEEECCCCCEEEEEe-CCcCcEEEEEecCCEE
Confidence 99999999998765 6689999999999999 4789999999999 9999999999999984 6777777888899999
Q ss_pred EEee
Q 020784 316 RVLR 319 (321)
Q Consensus 316 a~~~ 319 (321)
+++.
T Consensus 350 ~sg~ 353 (435)
T 1p22_A 350 VSGA 353 (435)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8864
No 68
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=3.5e-26 Score=207.41 Aligned_cols=200 Identities=13% Similarity=0.157 Sum_probs=164.3
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEecCCceeEEee--eecCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 82 SSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRD--FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 82 ~~~~~~V~~v~fs~-dg~~lasg~~~g-v~vw~~~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
..|...|++++|+| ++++|++|+.++ |+|||+.+.+...... ..|...+..++++++++.+++++ .|+.
T Consensus 112 ~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~dg~ 184 (366)
T 3k26_A 112 VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG-------MDHS 184 (366)
T ss_dssp ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec-------CCCC
Confidence 46888999999999 999999999765 8899999887766551 11678999999999999998888 6799
Q ss_pred EEEEeCCCCcEEEEEe-----------------------------eCCceeEEEEeCCeEEEEE-CCEEEEEEcCCc---
Q 020784 158 VMIWDDHQSRCIGELS-----------------------------FRSEVRSVKLRRDRIIVVL-EQKIFVYNFADL--- 204 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~-----------------------------~~~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~--- 204 (321)
|++||+++++....+. +...|.++.|+++.++++. ++.|++||+.++
T Consensus 185 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 264 (366)
T 3k26_A 185 LKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDD 264 (366)
T ss_dssp EEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCC
T ss_pred EEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCcccc
Confidence 9999998876443222 4567999999987777765 579999999765
Q ss_pred -----------EEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-----eEEeecc--ccceeEEEE
Q 020784 205 -----------KLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAH--DSRIACFAL 266 (321)
Q Consensus 205 -----------~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-----~~~l~~H--~~~V~~vaf 266 (321)
..+..+..|...+..+++++++++.+|+ +|+.||.|++||+..+. ...+.+| ...|++++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 343 (366)
T 3k26_A 265 IDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA-LGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSF 343 (366)
T ss_dssp GGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE-EECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEE
T ss_pred ccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE-EEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEe
Confidence 4478888888888888888886568888 49999999999998642 3377787 799999999
Q ss_pred CCCCCEEEEEeCCCcEEEEEEcCC
Q 020784 267 TQDGQLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 267 spdg~~las~S~Dgt~IrIWd~~t 290 (321)
+|+|++||+|+.||+ |+|||+.+
T Consensus 344 s~~~~~l~s~~~dg~-i~iwd~~~ 366 (366)
T 3k26_A 344 SRDSSILIAVCDDAS-IWRWDRLR 366 (366)
T ss_dssp CTTSSEEEEEETTSE-EEEEEC--
T ss_pred CCCCCeEEEEeCCCE-EEEEEecC
Confidence 999999999999999 99999864
No 69
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=2.1e-25 Score=207.01 Aligned_cols=223 Identities=11% Similarity=0.072 Sum_probs=173.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 87 TLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
.+....|+++|++|++|+.++ |+|||+.+.+....... |.+.|..++++++++.+++++ .|++|++||+++
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s-------~d~~i~iwd~~~ 170 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALISSS-------QDMQLKIWSVKD 170 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEEEE-------TTSEEEEEETTT
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEEEe-------CCCeEEEEeCCC
Confidence 455557899999999998865 88999988776544333 688999999999999888887 679999999999
Q ss_pred CcEEEEEee-CCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccC---CCCceEEE----------------
Q 020784 166 SRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIA---NPKGLCAV---------------- 222 (321)
Q Consensus 166 ~~~~~~~~~-~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~---~~~~~~~~---------------- 222 (321)
++.+..+.. ...|.+++|+++ .++.+. ++.|++||+++++.+..+..+. ..+..+++
T Consensus 171 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 171 GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 988888774 458999999975 455555 5699999999999999987643 22222222
Q ss_pred ---eeCCCceEEEeecCCCCcEEEEeeCCcc-eEE-eeccccceeEEEECCCCC-EEEEEeCCCcEEEEEEcCCCcE-EE
Q 020784 223 ---SQGVGSLVLVCPGLQKGQVRVEHYASKR-TKF-IMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDGTL-LQ 295 (321)
Q Consensus 223 ---s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~-l~~H~~~V~~vafspdg~-~las~S~Dgt~IrIWd~~tg~~-i~ 295 (321)
.+++++.+++ +|+.||.|++||+.... ... ..+|...|++++|+|++. +|++|+.||+ |+|||+++++. +.
T Consensus 251 ~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 251 NNLEFGTYGKYVI-AGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPECPVG 328 (420)
T ss_dssp CTTCSSCTTEEEE-EEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSE
T ss_pred cceEEcCCCCEEE-EEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcCchh
Confidence 2345678888 49999999999998765 333 456899999999999999 9999999999 99999999854 67
Q ss_pred EEeCCCcceeE-EEeecCceEEEee
Q 020784 296 EECCPSISAQS-GLWLSSAWLRVLR 319 (321)
Q Consensus 296 ~~~~g~~~~~~-~~s~d~~~la~~~ 319 (321)
++...+...+. .+++++++|+++.
T Consensus 329 ~~~~~~~~~v~~~~~~~~~~l~s~~ 353 (420)
T 3vl1_A 329 EFLINEGTPINNVYFAAGALFVSSG 353 (420)
T ss_dssp EEEESTTSCEEEEEEETTEEEEEET
T ss_pred hhhccCCCCceEEEeCCCCEEEEec
Confidence 77543443333 4567888888763
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=7.9e-25 Score=206.30 Aligned_cols=220 Identities=17% Similarity=0.224 Sum_probs=173.9
Q ss_pred CCCCCC-eEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 82 SSPPPT-LLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 82 ~~~~~~-V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
..|... +.|+.| ++++|++|+.++ |++||+.+++....... |.+.|..+++.+++ .+++++ .|++|+
T Consensus 118 ~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s-------~dg~i~ 186 (464)
T 3v7d_B 118 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHGG-ILVSGS-------TDRTVR 186 (464)
T ss_dssp ECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSTT-EEEEEE-------TTSCEE
T ss_pred cCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCC-EEEEEe-------CCCCEE
Confidence 456555 566666 567999998865 88999999887766654 78899999987766 666666 679999
Q ss_pred EEeCCCCcEEEEEee-CCceeEEEEeC--C--eEEEEE-CCEEEEEEcCCcEE-----------------------EEEE
Q 020784 160 IWDDHQSRCIGELSF-RSEVRSVKLRR--D--RIIVVL-EQKIFVYNFADLKL-----------------------LHQI 210 (321)
Q Consensus 160 iWD~~~~~~~~~~~~-~~~v~~v~~~~--~--~~~~~~-~~~I~iwd~~~~~~-----------------------~~~l 210 (321)
+||+++++.+..+.. ...|.++++.+ + .+++++ ++.|++||+.+++. +..+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 999999998888874 45899999873 3 345554 57999999987653 3344
Q ss_pred eccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 020784 211 ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 211 ~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~ 289 (321)
.+|.. .+.++++++ .+++ +|+.||.|++||+.+.. +..+.+|...|++++|+|+|.+|++|+.||+ |+|||++
T Consensus 267 ~~~~~--~v~~~~~~~--~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vwd~~ 340 (464)
T 3v7d_B 267 RGHMA--SVRTVSGHG--NIVV-SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIWDLE 340 (464)
T ss_dssp CCCSS--CEEEEEEET--TEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEETT
T ss_pred cCccc--eEEEEcCCC--CEEE-EEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEEECC
Confidence 44433 355566554 6677 48999999999998765 6688999999999999999999999999999 9999999
Q ss_pred CCcEEEEEeCCCcceeEEEeecCceEEEee
Q 020784 290 DGTLLQEECCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 290 tg~~i~~~~~g~~~~~~~~s~d~~~la~~~ 319 (321)
+++++.++ .+|...+.++.+++.+|+++.
T Consensus 341 ~~~~~~~~-~~h~~~v~~~~~~~~~l~s~s 369 (464)
T 3v7d_B 341 NGELMYTL-QGHTALVGLLRLSDKFLVSAA 369 (464)
T ss_dssp TTEEEEEE-CCCSSCEEEEEECSSEEEEEE
T ss_pred CCcEEEEE-eCCCCcEEEEEEcCCEEEEEe
Confidence 99999999 467777778888899988764
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=7.5e-25 Score=220.01 Aligned_cols=226 Identities=10% Similarity=0.061 Sum_probs=185.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|||++|++|+.++ |+|||+.+++....... |.+.+..+++++++..+++++ .|++|++
T Consensus 52 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-------~dg~i~v 123 (814)
T 3mkq_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGS-------DDLTVKL 123 (814)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEE-------TTSEEEE
T ss_pred ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCCEEEEEc-------CCCEEEE
Confidence 46778999999999999999999866 88999999887766654 688899999999999998877 6799999
Q ss_pred EeCCCC-cEEEEEee-CCceeEEEEeC-C--eEEEEE-CCEEEEEEcCCcEEEEEEeccC-CCCceEEEeeCCCceEEEe
Q 020784 161 WDDHQS-RCIGELSF-RSEVRSVKLRR-D--RIIVVL-EQKIFVYNFADLKLLHQIETIA-NPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 161 WD~~~~-~~~~~~~~-~~~v~~v~~~~-~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~-~~~~~~~~s~~~d~~~la~ 233 (321)
||++++ .....+.. ...|.+++|++ + .+++++ ++.|++||+.+++....+..+. ..+..+++++.+++.+++
T Consensus 124 w~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~- 202 (814)
T 3mkq_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI- 202 (814)
T ss_dssp EEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE-
T ss_pred EECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE-
Confidence 999887 55556654 45799999998 4 344444 5799999998888777777654 667778888766778888
Q ss_pred ecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcc-eeEEEeec
Q 020784 234 PGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSIS-AQSGLWLS 311 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~-~~~~~s~d 311 (321)
+|+.||.|++||...+. +..+.+|...|++++|+|+|.+|++++.||+ |+|||+.+++++.++...... ..++++++
T Consensus 203 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 281 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNVGLERSWCIATHPT 281 (814)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCSEEEEECCSSSSEEEEEECTT
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEeecCCCcEEEEEEccC
Confidence 48999999999988765 5688999999999999999999999999999 999999999999998654332 34466777
Q ss_pred Cc--eEEE
Q 020784 312 SA--WLRV 317 (321)
Q Consensus 312 ~~--~la~ 317 (321)
++ ++++
T Consensus 282 ~~~~~~~~ 289 (814)
T 3mkq_A 282 GRKNYIAS 289 (814)
T ss_dssp CGGGEEEE
T ss_pred CCceEEEE
Confidence 76 4554
No 72
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=8.6e-25 Score=219.59 Aligned_cols=226 Identities=11% Similarity=0.102 Sum_probs=185.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|.+.|++++|+|||++||+|+.+| |+|||+.+++....... |.+.+..++|+++++.+++++ .|+.|+|
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-------~dg~i~v 81 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIVGS-------DDFRIRV 81 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEEEE-------TTSEEEE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCCEEEEEe-------CCCeEEE
Confidence 46778999999999999999999865 88999999887666654 688999999999999999888 6799999
Q ss_pred EeCCCCcEEEEEee-CCceeEEEEeCCe--EEEEE-CCEEEEEEcCCc-EEEEEEeccCCCCceEEEeeCCCceEEEeec
Q 020784 161 WDDHQSRCIGELSF-RSEVRSVKLRRDR--IIVVL-EQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~-~~~~~l~~~~~~~~~~~~s~~~d~~~la~sG 235 (321)
||+.+++.+..+.. ...|.+++|+++. ++++. ++.|++||+.++ .....+..|...+..+++++. ++..++ +|
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~-~~ 159 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK-DPSTFA-SG 159 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT-EEEEEE-EE
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC-CCCEEE-EE
Confidence 99999999888874 4589999999764 55555 469999999876 777888888776666666652 446676 48
Q ss_pred CCCCcEEEEeeCCcc-eEEeecc-ccceeEEEECC--CCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcc--eeEEEe
Q 020784 236 LQKGQVRVEHYASKR-TKFIMAH-DSRIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSIS--AQSGLW 309 (321)
Q Consensus 236 s~dg~V~i~d~~~~~-~~~l~~H-~~~V~~vafsp--dg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~--~~~~~s 309 (321)
+.||.|++||+.... ...+..| ...|++++|+| ++.+|++|+.||+ |++||+.+++++.++. ++.. ..+.++
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~-~~~~~v~~~~~~ 237 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLE-GHMSNVSFAVFH 237 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEEE-CCSSCEEEEEEC
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEEc-CCCCCEEEEEEc
Confidence 999999999987644 4455554 48999999999 9999999999999 9999999999999885 3433 345778
Q ss_pred ecCceEEEee
Q 020784 310 LSSAWLRVLR 319 (321)
Q Consensus 310 ~d~~~la~~~ 319 (321)
+++++|+++.
T Consensus 238 ~~~~~l~~~~ 247 (814)
T 3mkq_A 238 PTLPIIISGS 247 (814)
T ss_dssp SSSSEEEEEE
T ss_pred CCCCEEEEEe
Confidence 8999988764
No 73
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.4e-27 Score=215.83 Aligned_cols=202 Identities=13% Similarity=0.180 Sum_probs=161.0
Q ss_pred CCCCCCeEEEEEcCC-CCEEEEEcCCc-EEEEEecCCc------eeEEe--eeecCCceEEEEEecC-CCeEEEEeCCCC
Q 020784 82 SSPPPTLLHISFNQD-HGCFAAGTDHG-FRIYNCDPFR------EIFRR--DFERGGGIGVVEMLFR-CNILALVGGGPD 150 (321)
Q Consensus 82 ~~~~~~V~~v~fs~d-g~~lasg~~~g-v~vw~~~~~~------~~~~~--~~~~~~~v~~v~~~~~-~~~~~~~sg~~~ 150 (321)
..|...|++++|+|+ +++|++|+.++ |+|||+.+.+ ..... ...|.+.+..++++++ +..+++++
T Consensus 110 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---- 185 (416)
T 2pm9_A 110 SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG---- 185 (416)
T ss_dssp CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES----
T ss_pred cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc----
Confidence 568889999999998 89999998855 8899998775 32222 1115778999999988 56676666
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEee-------CCceeEEEEeCC---eEEEEEC-C---EEEEEEcCCc-EEEEEEe-ccC
Q 020784 151 PQYPLNKVMIWDDHQSRCIGELSF-------RSEVRSVKLRRD---RIIVVLE-Q---KIFVYNFADL-KLLHQIE-TIA 214 (321)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~~~~~-------~~~v~~v~~~~~---~~~~~~~-~---~I~iwd~~~~-~~~~~l~-~~~ 214 (321)
.|+.|++||+++++.+..+.. ...|.+++|+++ .++++.. + .|++||++++ +.+..+. .|.
T Consensus 186 ---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~ 262 (416)
T 2pm9_A 186 ---SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ 262 (416)
T ss_dssp ---SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS
T ss_pred ---CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc
Confidence 579999999999998888876 457999999986 3555554 4 9999999875 5666666 666
Q ss_pred CCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCC-CEEEEEeCCCcEEEEEEcCCCc
Q 020784 215 NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGT 292 (321)
Q Consensus 215 ~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg-~~las~S~Dgt~IrIWd~~tg~ 292 (321)
..+..+++++. ++.+|+ +|+.||.|++||+.+.. +..+.+|...|++++|+|++ .+||+++.||+ |+|||+.+++
T Consensus 263 ~~v~~~~~s~~-~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~-i~iw~~~~~~ 339 (416)
T 2pm9_A 263 KGILSLDWCHQ-DEHLLL-SSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNK-IEVQTLQNLT 339 (416)
T ss_dssp SCEEEEEECSS-CSSCEE-EEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSE-EEEEESCCCC
T ss_pred CceeEEEeCCC-CCCeEE-EEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCc-EEEEEccCCC
Confidence 65555555552 456777 48999999999988755 66899999999999999999 89999999999 9999999876
Q ss_pred E
Q 020784 293 L 293 (321)
Q Consensus 293 ~ 293 (321)
.
T Consensus 340 ~ 340 (416)
T 2pm9_A 340 N 340 (416)
T ss_dssp C
T ss_pred C
Confidence 4
No 74
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=1.6e-24 Score=203.57 Aligned_cols=217 Identities=16% Similarity=0.209 Sum_probs=177.4
Q ss_pred CCCCCCe-EEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 82 SSPPPTL-LHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 82 ~~~~~~V-~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
..|.+.| .|+ +++|++|++|+.++ |+|||+.+++....... |.+.|..+.+. ++.+++++ .|++|+
T Consensus 115 ~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~~-------~dg~i~ 182 (445)
T 2ovr_B 115 KGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DNIIISGS-------TDRTLK 182 (445)
T ss_dssp ECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TTEEEEEE-------TTSCEE
T ss_pred cccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CCEEEEEe-------CCCeEE
Confidence 4566654 554 45689999998865 88999999887666554 67778777664 67777777 679999
Q ss_pred EEeCCCCcEEEEEeeC-CceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCC
Q 020784 160 IWDDHQSRCIGELSFR-SEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (321)
+||+.+++.+..+..+ ..|.++.++++.+++++ ++.|++||+.+++.+..+..|...+..+++ + +.+++ +|+.
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~-~~~~ 257 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--D--GRRVV-SGAY 257 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--C--SSCEE-EEET
T ss_pred EEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--C--CCEEE-EEcC
Confidence 9999999988888754 47999999999888886 469999999999999999888766554444 3 35666 4899
Q ss_pred CCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEE
Q 020784 238 KGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLR 316 (321)
Q Consensus 238 dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la 316 (321)
||.|++||..+.. +..+.+|...|.+++| ++.+|++|+.||+ |+|||+++++++.++ .++......+++++.+|+
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~l~ 333 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTL-TGHQSLTSGMELKDNILV 333 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEE-CCCCSCEEEEEEETTEEE
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEE-cCCcccEEEEEEeCCEEE
Confidence 9999999987655 6688999999999999 8899999999999 999999999999988 467777778888999988
Q ss_pred Eee
Q 020784 317 VLR 319 (321)
Q Consensus 317 ~~~ 319 (321)
++.
T Consensus 334 ~~~ 336 (445)
T 2ovr_B 334 SGN 336 (445)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=1.3e-24 Score=193.55 Aligned_cols=201 Identities=13% Similarity=0.179 Sum_probs=148.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeee------------------------------------
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDF------------------------------------ 124 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~------------------------------------ 124 (321)
+.|...|++++|+|+|++||+|+.++ |+||++.+++.+.....
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~ 143 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHV 143 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeE
Confidence 45777899999999999999999866 88999988765443321
Q ss_pred ----ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEE-----EEEeeCCceeEEEEeCC---eEEEEE
Q 020784 125 ----ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI-----GELSFRSEVRSVKLRRD---RIIVVL 192 (321)
Q Consensus 125 ----~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~-----~~~~~~~~v~~v~~~~~---~~~~~~ 192 (321)
.|...+..+.+...++.+++++ .|++|+|||+++++.. ........|.++.+.+. .+.+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 144 ATLSGHSQEVCGLRWAPDGRHLASGG-------NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEE-------TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred EEEcCccCceEEEEEcCCCCEEEEEe-------cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 0233444455555566666555 6799999999876532 22234457888888753 344443
Q ss_pred ---CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECC
Q 020784 193 ---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQ 268 (321)
Q Consensus 193 ---~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafsp 268 (321)
++.|++||............ ...+..+.+++..+ .+++++|+.||.|+|||+.++. +.++.+|.+.|++|+|+|
T Consensus 217 ~~~~~~i~lwd~~~~~~~~~~~~-~~~v~~~~~~~~~~-~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp 294 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGACLSAVDA-HSQVCSILWSPHYK-ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP 294 (318)
T ss_dssp CTTTCEEEEEETTTCCEEEEEEC-SSCEEEEEEETTTT-EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred cCCCCEEEEEecccccccccccc-eeeeeeeeeccccc-ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 36999999998877666543 34455666666554 3444468899999999998765 678999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEEcCCCc
Q 020784 269 DGQLLATSSTKGTLVRIFNTLDGT 292 (321)
Q Consensus 269 dg~~las~S~Dgt~IrIWd~~tg~ 292 (321)
||++|||||.||+ |||||+.+..
T Consensus 295 dg~~l~S~s~D~~-v~iWd~~~~d 317 (318)
T 4ggc_A 295 DGATVASAAADET-LRLWRCFELD 317 (318)
T ss_dssp TSSCEEEEETTTE-EEEECCSCCC
T ss_pred CCCEEEEEecCCe-EEEEECCCCC
Confidence 9999999999999 9999997653
No 76
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=3.4e-25 Score=198.41 Aligned_cols=206 Identities=13% Similarity=0.156 Sum_probs=157.1
Q ss_pred CCCCCCeEEEEEcC--CCCEEEEEcCCc-EEEEEecCCc---------eeEEeeeecCCceEEEEEecC--CCeEEEEeC
Q 020784 82 SSPPPTLLHISFNQ--DHGCFAAGTDHG-FRIYNCDPFR---------EIFRRDFERGGGIGVVEMLFR--CNILALVGG 147 (321)
Q Consensus 82 ~~~~~~V~~v~fs~--dg~~lasg~~~g-v~vw~~~~~~---------~~~~~~~~~~~~v~~v~~~~~--~~~~~~~sg 147 (321)
..|...|++++|+| |+++|++|+.++ |+|||+.+.+ ....... |.+.+..+++.++ ++.+++++
T Consensus 54 ~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~- 131 (351)
T 3f3f_A 54 RAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLG- 131 (351)
T ss_dssp ECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEE-
T ss_pred ccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEec-
Confidence 45778999999999 699999999865 8899998763 2333332 6788999999998 88888887
Q ss_pred CCCCCCCCCcEEEEeCCCCcEEEEEe--------------eCCceeEEEEeCC-----eEEEEEC-CEEEEEEcCCcEE-
Q 020784 148 GPDPQYPLNKVMIWDDHQSRCIGELS--------------FRSEVRSVKLRRD-----RIIVVLE-QKIFVYNFADLKL- 206 (321)
Q Consensus 148 ~~~~~~~d~~v~iWD~~~~~~~~~~~--------------~~~~v~~v~~~~~-----~~~~~~~-~~I~iwd~~~~~~- 206 (321)
.|+.|++||+++++.+..+. +...+.++.|+++ .++++.. +.+.+|+...++.
T Consensus 132 ------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 205 (351)
T 3f3f_A 132 ------NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLH 205 (351)
T ss_dssp ------TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEE
T ss_pred ------CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCcee
Confidence 67999999998876443322 2346888998753 4555655 4777777666654
Q ss_pred -EEEEeccCCCCceEEEeeCCCc--eEEEeecCCCCcEEEEeeCC-----------------------------------
Q 020784 207 -LHQIETIANPKGLCAVSQGVGS--LVLVCPGLQKGQVRVEHYAS----------------------------------- 248 (321)
Q Consensus 207 -~~~l~~~~~~~~~~~~s~~~d~--~~la~sGs~dg~V~i~d~~~----------------------------------- 248 (321)
+..+..|...+..+++++++.. .+|+ +|+.||.|++||+..
T Consensus 206 ~~~~~~~h~~~i~~~~~~p~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (351)
T 3f3f_A 206 VAAKLPGHKSLIRSISWAPSIGRWYQLIA-TGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNT 284 (351)
T ss_dssp EEEECCCCCSCEEEEEECCCSSCSSEEEE-EEETTSCEEEEEEEECC---------------------------------
T ss_pred eeeecCCCCcceeEEEECCCCCCcceEEE-EEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccc
Confidence 5666666666555565554321 6777 599999999999875
Q ss_pred ------------cceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 020784 249 ------------KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEE 297 (321)
Q Consensus 249 ------------~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~ 297 (321)
..+..+.+|...|++++|+|+|++||||+.||+ |+|||+.+++.+..+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 285 EEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGK-VRLWKATYSNEFKCM 344 (351)
T ss_dssp ------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSC-EEEEEECTTSCEEEE
T ss_pred ceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCc-EEEEecCcCcchhhe
Confidence 335578899999999999999999999999999 999999998766655
No 77
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=1.5e-24 Score=202.60 Aligned_cols=226 Identities=12% Similarity=0.094 Sum_probs=172.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|+||+|+|||++||+|+.++ |+|||+.+++.+..... |...+.++ .+++..+++++ .|+.+++
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~-h~~~v~~~--s~~~~~l~sgs-------~d~~i~~ 213 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARVGSL--SWNSYILSSGS-------RSGHIHH 213 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEE--EEETTEEEEEE-------TTSEEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC-CCCceEEE--eeCCCEEEEEe-------CCCceeE
Confidence 45667899999999999999999866 88999999987766554 55555554 45677777777 6799999
Q ss_pred EeCCCCc-EEEEEeeC-CceeEEEEeCC--eEEEEE-CCEEEEEEcCCcE----EEEEEeccCCCCceEEEeeCCCceEE
Q 020784 161 WDDHQSR-CIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLK----LLHQIETIANPKGLCAVSQGVGSLVL 231 (321)
Q Consensus 161 WD~~~~~-~~~~~~~~-~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~----~~~~l~~~~~~~~~~~~s~~~d~~~l 231 (321)
||..... .+..+..+ ..+..+.+.++ .++.+. ++.|++|+...++ .+..+..+...+..+++++.....+.
T Consensus 214 ~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la 293 (420)
T 4gga_A 214 HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 293 (420)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEE
T ss_pred eeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEE
Confidence 9988654 45555544 47888888865 344444 5799999997654 34556666666667777776555444
Q ss_pred EeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEe--CCCcEEEEEEcCCCcEEEEEeCCCcceeE--E
Q 020784 232 VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS--TKGTLVRIFNTLDGTLLQEECCPSISAQS--G 307 (321)
Q Consensus 232 a~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S--~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~--~ 307 (321)
..+|+.||.|++||+.++.......+...|.+++|++++..|++++ .|++ |+|||+.+++++.++ .||...+. +
T Consensus 294 ~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l-~gH~~~V~~l~ 371 (420)
T 4gga_A 294 TGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAEL-KGHTSRVLSLT 371 (420)
T ss_dssp EEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEE-CCCSSCEEEEE
T ss_pred EEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEE-cCCCCCEEEEE
Confidence 4467899999999998877554444566799999999999988765 7899 999999999999999 47776554 6
Q ss_pred EeecCceEEEee
Q 020784 308 LWLSSAWLRVLR 319 (321)
Q Consensus 308 ~s~d~~~la~~~ 319 (321)
+++||++|+.+.
T Consensus 372 ~spdg~~l~S~s 383 (420)
T 4gga_A 372 MSPDGATVASAA 383 (420)
T ss_dssp ECTTSSCEEEEE
T ss_pred EcCCCCEEEEEe
Confidence 778999998764
No 78
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.6e-24 Score=189.46 Aligned_cols=220 Identities=13% Similarity=0.061 Sum_probs=175.3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|.+.|++++| +++++|++|+.++ |+|||+.+.+....... |.+.+..++++++++.+++++ .|+.|+
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-------~dg~i~ 84 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT-GQGFLNSVCYDSEKELLLFGG-------KDTMIN 84 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEE-CSSCEEEEEEETTTTEEEEEE-------TTSCEE
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeec-CCccEEEEEECCCCCEEEEec-------CCCeEE
Confidence 3578889999999 9999999999866 88999988876655554 688999999999999999888 679999
Q ss_pred EEeCCCC---cEEEEEe-eCCceeEEEEeCCeEEEEEC-CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEee
Q 020784 160 IWDDHQS---RCIGELS-FRSEVRSVKLRRDRIIVVLE-QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (321)
Q Consensus 160 iWD~~~~---~~~~~~~-~~~~v~~v~~~~~~~~~~~~-~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~s 234 (321)
+||+... +.+..+. +...|.++.|+++.++++.. +.|++|| .++.+..+..|...+..+++.+. ++..++ +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~-~ 160 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF-SENKFL-T 160 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET-TTTEEE-E
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC-CCCEEE-E
Confidence 9998654 4444554 44589999998888888764 6999999 67788888888777767777663 335566 4
Q ss_pred cCCCCcEEEEeeCCcceEEeec-cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee--EEEeec
Q 020784 235 GLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ--SGLWLS 311 (321)
Q Consensus 235 Gs~dg~V~i~d~~~~~~~~l~~-H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~~s~d 311 (321)
|+.||.|++|| .......+.. |...|.+++|+|++. |++++.||. |+|||+++++++.++. ++...+ +.++++
T Consensus 161 ~~~d~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 161 ASADKTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYE-GHESFVYCIKLLPN 236 (313)
T ss_dssp EETTSCEEEEE-TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEE-CCSSCEEEEEECTT
T ss_pred EECCCCEEEEe-cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhh-cCCceEEEEEEecC
Confidence 89999999999 3444566776 999999999999998 899999999 9999999999999985 444433 466677
Q ss_pred CceEEEe
Q 020784 312 SAWLRVL 318 (321)
Q Consensus 312 ~~~la~~ 318 (321)
++ |+++
T Consensus 237 ~~-l~~~ 242 (313)
T 3odt_A 237 GD-IVSC 242 (313)
T ss_dssp SC-EEEE
T ss_pred CC-EEEE
Confidence 74 4443
No 79
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.8e-25 Score=206.41 Aligned_cols=224 Identities=9% Similarity=0.061 Sum_probs=174.1
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEecCCc---eeEEeeee-------------------------------------
Q 020784 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFR---EIFRRDFE------------------------------------- 125 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~---~~~~~~~~------------------------------------- 125 (321)
.++.+++|++||++|+++.++.|++||+.+++ .+..+...
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 37899999999999999888889999999887 44333210
Q ss_pred ----------------cCCceEEEEEecCCCeE-EEEeCCCCCCCCCCcEEEEeCC--CCcEEEEEe---eCCceeEEEE
Q 020784 126 ----------------RGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDH--QSRCIGELS---FRSEVRSVKL 183 (321)
Q Consensus 126 ----------------~~~~v~~v~~~~~~~~~-~~~sg~~~~~~~d~~v~iWD~~--~~~~~~~~~---~~~~v~~v~~ 183 (321)
|.+.|..++++++++.+ ++++ .|++|+|||+. +++.+..+. +...|.+++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD-------SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI 157 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEG-------GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC-------CCCeEEEEECcCCCCceeeeeecccCCCCceEEEE
Confidence 12258899999999986 5554 57999999999 888777764 3468999999
Q ss_pred eCC--eEEEEE-CCEEEEEEcCCcEEEE----EEeccCCCCceEEEeeC-CCceEEEeecCCCCcEEEEeeCCcc-eEE-
Q 020784 184 RRD--RIIVVL-EQKIFVYNFADLKLLH----QIETIANPKGLCAVSQG-VGSLVLVCPGLQKGQVRVEHYASKR-TKF- 253 (321)
Q Consensus 184 ~~~--~~~~~~-~~~I~iwd~~~~~~~~----~l~~~~~~~~~~~~s~~-~d~~~la~sGs~dg~V~i~d~~~~~-~~~- 253 (321)
+++ .++++. ++.|++|++.+++... .+..|...+..++++++ ..+.+|+ +|+.||.|++||+..+. +..
T Consensus 158 sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 158 AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII-TSDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE-EEETTSCEEEEEESCTTCEEEE
T ss_pred cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE-EEcCCCcEEEEECCCCceeeee
Confidence 876 455554 4699999998776543 66677766667777775 1157777 58999999999998765 445
Q ss_pred eeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC--------------------------cceeEE
Q 020784 254 IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS--------------------------ISAQSG 307 (321)
Q Consensus 254 l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~--------------------------~~~~~~ 307 (321)
+.+|...|++++|+ +|.+|++|+.|++ |+|||+++++++.++..++ ....+.
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 66899999999999 9999999999999 9999999999999886321 123446
Q ss_pred EeecCceEEEee
Q 020784 308 LWLSSAWLRVLR 319 (321)
Q Consensus 308 ~s~d~~~la~~~ 319 (321)
+++++++|+++.
T Consensus 315 ~~~~~~~l~~~~ 326 (450)
T 2vdu_B 315 KSKNLPFVAFFV 326 (450)
T ss_dssp ECSSSSEEEEEE
T ss_pred EeCCCCEEEEEE
Confidence 778899988764
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.94 E-value=3.2e-25 Score=200.60 Aligned_cols=229 Identities=10% Similarity=0.083 Sum_probs=172.7
Q ss_pred CCCCCCeEEEEEcCCCCE-EEEEcC---C-cEEEEEecCCceeEEeeeecCCceEEEEEecC---CCeEEEEeCCCCCCC
Q 020784 82 SSPPPTLLHISFNQDHGC-FAAGTD---H-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFR---CNILALVGGGPDPQY 153 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~-lasg~~---~-gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~~~~~sg~~~~~~ 153 (321)
..|...|++++|+|+|.. +++|+. + .|+|||+.+.+........|...+..++++++ ++.+++++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~------- 87 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD------- 87 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE-------
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec-------
Confidence 458889999999999965 456654 4 48899999887655544446889999999887 58888877
Q ss_pred CCCcEEEEeCCCCc-EEEEEee-CCceeEEEEe------CC--eEEEEE-CCEEEEEEcCCcE-EEEEEeccCC--CCce
Q 020784 154 PLNKVMIWDDHQSR-CIGELSF-RSEVRSVKLR------RD--RIIVVL-EQKIFVYNFADLK-LLHQIETIAN--PKGL 219 (321)
Q Consensus 154 ~d~~v~iWD~~~~~-~~~~~~~-~~~v~~v~~~------~~--~~~~~~-~~~I~iwd~~~~~-~~~~l~~~~~--~~~~ 219 (321)
.|+.|++||+.+++ .+..+.. ...|.++.|. ++ .++++. ++.|++||+++++ .+..+..+.. ...+
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 67999999999887 6666664 4579998764 33 555555 4699999998876 6777766543 2234
Q ss_pred EEEe----eCCCceEEEeecCCCCcEEEEeeCCcceEEeeccccceeEEEECC---CCCEEEEEeCCCcEEEEEEcCCCc
Q 020784 220 CAVS----QGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQ---DGQLLATSSTKGTLVRIFNTLDGT 292 (321)
Q Consensus 220 ~~~s----~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafsp---dg~~las~S~Dgt~IrIWd~~tg~ 292 (321)
.++. ..+++.+++ +|+.||.|++||+..........|...|++++|+| ++.+|++|+.||. |+|||+++++
T Consensus 168 ~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~ 245 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVC-AGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFDMRTQH 245 (357)
T ss_dssp EEEEEECCCC-CCCEEE-EEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEEEEEEE
T ss_pred EEEEEEeccCCCCCEEE-EEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEeCcCCC
Confidence 3433 455668887 48999999999999888777788999999999999 9999999999999 9999999876
Q ss_pred EEEEEe----CCCccee--EEEeecCc-eEEEee
Q 020784 293 LLQEEC----CPSISAQ--SGLWLSSA-WLRVLR 319 (321)
Q Consensus 293 ~i~~~~----~g~~~~~--~~~s~d~~-~la~~~ 319 (321)
.+..+. .++...+ +.++++++ +|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG 279 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEe
Confidence 554442 2444433 46677777 677653
No 81
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=9.3e-25 Score=229.31 Aligned_cols=226 Identities=12% Similarity=0.123 Sum_probs=186.5
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|.+.|++++|+|||++||+|+.++ |+|||+.+++....... |.+.|.+++++++++.+++++ .|++|+
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~-------~d~~v~ 682 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDSYIATCS-------ADKKVK 682 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCCEEEEEe-------CCCeEE
Confidence 357888999999999999999998865 88999999887766654 788999999999999999888 679999
Q ss_pred EEeCCCCcEEEEEeeC-CceeEEEEeC--C--eEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 160 IWDDHQSRCIGELSFR-SEVRSVKLRR--D--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~--~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
|||+.+++.+..+..+ ..|.++.|++ + .++.++ ++.|++||+.+++.+.++.+|...+..+++++ ++.+++
T Consensus 683 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp--~~~~l~- 759 (1249)
T 3sfz_A 683 IWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP--DDELLA- 759 (1249)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS--STTEEE-
T ss_pred EEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec--CCCEEE-
Confidence 9999999998888755 4799999987 3 244444 46999999999999999998887766666665 457777
Q ss_pred ecCCCCcEEEEeeCCcce-EE-------------------------------------------------------eecc
Q 020784 234 PGLQKGQVRVEHYASKRT-KF-------------------------------------------------------IMAH 257 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~~-~~-------------------------------------------------------l~~H 257 (321)
+|+.||.|++||+..... .. ..+|
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 589999999999754321 11 1278
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce--eEEEeecCceEEEee
Q 020784 258 DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA--QSGLWLSSAWLRVLR 319 (321)
Q Consensus 258 ~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~--~~~~s~d~~~la~~~ 319 (321)
...|++++|+|++.++++++.||+ |+|||+.+++++..+. +|... .+.++++|++|+++.
T Consensus 840 ~~~v~~~~~sp~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCR-GHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp SSCCCEEEECSSTTEEEEECSSSC-EEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCceeeecC-CCccceEEEEECCCCCEEEEEe
Confidence 899999999999999999999999 9999999999999884 55544 347788899988764
No 82
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.5e-26 Score=218.87 Aligned_cols=225 Identities=8% Similarity=-0.052 Sum_probs=166.3
Q ss_pred CCCCeEEEEEcCCC---------CEEEEEc-------------------CC-cEEEEEecCCceeE----EeeeecCCce
Q 020784 84 PPPTLLHISFNQDH---------GCFAAGT-------------------DH-GFRIYNCDPFREIF----RRDFERGGGI 130 (321)
Q Consensus 84 ~~~~V~~v~fs~dg---------~~lasg~-------------------~~-gv~vw~~~~~~~~~----~~~~~~~~~v 130 (321)
+.+.|++++|+|++ ++||+|+ .+ .|+||++++.+... .... |.+.|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~-~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVH-SFGEV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEE-CCCSE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEe-cCCcE
Confidence 45789999999987 7787755 33 37899998776432 1222 46789
Q ss_pred EEEEEecC------CCeEEEEeCCCCCCCCCCcEEEEeCCCCcEE-----------EEEee-CCceeEEEEeCC-eEEEE
Q 020784 131 GVVEMLFR------CNILALVGGGPDPQYPLNKVMIWDDHQSRCI-----------GELSF-RSEVRSVKLRRD-RIIVV 191 (321)
Q Consensus 131 ~~v~~~~~------~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~-----------~~~~~-~~~v~~v~~~~~-~~~~~ 191 (321)
..++|+++ +..+++++ .|++|+|||+.++... ..+.. ...|.+++|+++ .++++
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s-------~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasg 283 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVS-------QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCG 283 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEE-------TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEE
T ss_pred EEEEECCCCCCCCCCceEEEEe-------cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEE
Confidence 99999886 45777777 6899999999866421 23433 357999999865 44455
Q ss_pred E-CCEEEEEEcCCc-EEEEEEeccCCCCceEEEeeCCCc-eEEEeecCCCCcEEEEeeCCcc-eEEeecccc--ceeEEE
Q 020784 192 L-EQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGS-LVLVCPGLQKGQVRVEHYASKR-TKFIMAHDS--RIACFA 265 (321)
Q Consensus 192 ~-~~~I~iwd~~~~-~~~~~l~~~~~~~~~~~~s~~~d~-~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~--~V~~va 265 (321)
+ +++|++||++++ .....+..|...+..+++.+.+++ .+|| +|+.||+|+|||+.... ..++.+|.. .|++|+
T Consensus 284 s~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la-S~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS-TVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp ETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE-EEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEE
T ss_pred eCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE-EeccCCeEEEEECCCCCcccccccccccCcccceE
Confidence 4 479999999865 344567888777666544555565 6777 69999999999987644 557778864 589999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee--EEEeecCceEEEee
Q 020784 266 LTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ--SGLWLSSAWLRVLR 319 (321)
Q Consensus 266 fspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~~s~d~~~la~~~ 319 (321)
|+|+++.||+++.|++ |||||++++++++++. +|...+ +++++++++|+.+.
T Consensus 363 fsp~~~~l~s~~~d~t-v~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 363 YCPQIYSYIYSDGASS-LRAVPSRAAFAVHPLV-SRETTITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp EETTTTEEEEECSSSE-EEEEETTCTTCCEEEE-ECSSCEEEEECCSSCCBCEEEE
T ss_pred eCCCcCeEEEeCCCCc-EEEEECcccccceeee-cCCCceEEEEeCCCCCeEEEEE
Confidence 9999999999999999 9999999999988875 565444 47778889988764
No 83
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=8.4e-25 Score=205.19 Aligned_cols=217 Identities=11% Similarity=0.209 Sum_probs=175.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++| ++++|++|+.++ |+|||+.+++....... |.+.+..+++ +++.+++++ .|++|++
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~--~~~~l~s~s-------~dg~i~v 237 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLRF--NNGMMVTCS-------KDRSIAV 237 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC-CCSCEEEEEC--CTTEEEEEE-------TTSCEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC-CCCcEEEEEE--cCCEEEEee-------CCCcEEE
Confidence 568889999999 789999998865 88999999887666554 5666766665 567777777 6799999
Q ss_pred EeCCCCcEE---EEEe-eCCceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeec
Q 020784 161 WDDHQSRCI---GELS-FRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 161 WD~~~~~~~---~~~~-~~~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sG 235 (321)
||+.++... ..+. +...|.++.+..+.+++++ ++.|++||+++++.+.++..|...+..+.+ ++ .+++ +|
T Consensus 238 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~--~~l~-~g 312 (435)
T 1p22_A 238 WDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RD--RLVV-SG 312 (435)
T ss_dssp EECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ET--TEEE-EE
T ss_pred EeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CC--CEEE-EE
Confidence 999887654 3333 3458999999888888886 469999999999999999988766544444 33 5666 48
Q ss_pred CCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCc---------EEEEEeCCCccee
Q 020784 236 LQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT---------LLQEECCPSISAQ 305 (321)
Q Consensus 236 s~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~---------~i~~~~~g~~~~~ 305 (321)
+.||.|++||+.++. +.++.+|...|++++| ++.+|++|+.||+ |+|||+.+++ ++.++ .+|...+
T Consensus 313 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~-~~h~~~v 388 (435)
T 1p22_A 313 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-IKVWDLVAALDPRAPAGTLCLRTL-VEHSGRV 388 (435)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC-EEEEEHHHHTSTTSCTTTTEEEEE-CCCSSCC
T ss_pred eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-EEEEECCCCCCccccccchheeec-cCCCCCe
Confidence 999999999998655 6689999999999999 7899999999999 9999998877 88888 5677777
Q ss_pred EEEeecCceEEEee
Q 020784 306 SGLWLSSAWLRVLR 319 (321)
Q Consensus 306 ~~~s~d~~~la~~~ 319 (321)
.++.+++++|+++.
T Consensus 389 ~~l~~~~~~l~s~s 402 (435)
T 1p22_A 389 FRLQFDEFQIVSSS 402 (435)
T ss_dssp CCEEECSSCEEECC
T ss_pred EEEEeCCCEEEEEe
Confidence 77778999988754
No 84
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=1.1e-24 Score=211.23 Aligned_cols=222 Identities=13% Similarity=0.134 Sum_probs=178.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEEecCC----ceeEEeeeecCCc-eEEEEEec--CCCeEEEEeCCCCCCCCC
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPF----REIFRRDFERGGG-IGVVEMLF--RCNILALVGGGPDPQYPL 155 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~----~~~~~~~~~~~~~-v~~v~~~~--~~~~~~~~sg~~~~~~~d 155 (321)
.|.+.|++++|+|||++||+|+++.++||++++. +....... |.+. |.++++++ +++.+++++ .|
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~~l~s~~-------~d 87 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQYLCSGD-------ES 87 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCCEEEEEE-------TT
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCCEEEEec-------CC
Confidence 4667899999999999999999888999999987 66555544 6778 99999999 999998887 67
Q ss_pred CcEEEEeCCCC--------cEEEEEe-eCCceeEEEEeCC--eEEEEEC-----CEEEEEEcCCcEEEEEEeccCCCCce
Q 020784 156 NKVMIWDDHQS--------RCIGELS-FRSEVRSVKLRRD--RIIVVLE-----QKIFVYNFADLKLLHQIETIANPKGL 219 (321)
Q Consensus 156 ~~v~iWD~~~~--------~~~~~~~-~~~~v~~v~~~~~--~~~~~~~-----~~I~iwd~~~~~~~~~l~~~~~~~~~ 219 (321)
++|+|||+.++ ..+..+. +...|.+++|+++ .++++.. +.|++|| .++.+..+..|...+..
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINA 165 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEE
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEE
Confidence 99999999754 5555665 4458999999986 4555554 3788887 56677888888776666
Q ss_pred EEEeeCCCce-EEEeecCCCCcEEEEeeCCcc-eEEeecccc---ceeEEEECCC-CCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 220 CAVSQGVGSL-VLVCPGLQKGQVRVEHYASKR-TKFIMAHDS---RIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 220 ~~~s~~~d~~-~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~---~V~~vafspd-g~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
++++++ +. +++ +|+.||.|++||..... +..+.+|.. .|++++|+|+ |++|++++.||. |+|||++++++
T Consensus 166 ~~~~~~--~~~~l~-~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~ 241 (615)
T 1pgu_A 166 CHLKQS--RPMRSM-TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKSGEF 241 (615)
T ss_dssp EEECSS--SSCEEE-EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTTCCE
T ss_pred EEECCC--CCcEEE-EEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe-EEEEECCCCCE
Confidence 666654 44 455 58999999999988765 568899999 9999999999 999999999999 99999999999
Q ss_pred EEEEeC---CCcceeE--EEeecCceEEEee
Q 020784 294 LQEECC---PSISAQS--GLWLSSAWLRVLR 319 (321)
Q Consensus 294 i~~~~~---g~~~~~~--~~s~d~~~la~~~ 319 (321)
+.++.. ++...+. .++ ++++|+++.
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQKFATVG 271 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSSEEEEEE
T ss_pred eEEecccccccCCceEEEEEc-CCCEEEEEc
Confidence 998844 5554444 555 899988764
No 85
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.1e-25 Score=222.56 Aligned_cols=230 Identities=17% Similarity=0.131 Sum_probs=170.0
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecC--CCeEEEEeCCCCCCCCCC
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPLN 156 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~~~sg~~~~~~~d~ 156 (321)
...|.+.|++++|+|+|++|++|+.+| |+|||+..........+. |.+.|..++++++ ++.+++++ .||
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s-------~Dg 77 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------YDG 77 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE-------TTS
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe-------CCC
Confidence 457889999999999999999998766 889999854333333332 6788999999887 78888887 689
Q ss_pred cEEEEeCCCCc--EEEEEe-eCCceeEEEEeCC----eEEEEE-CCEEEEEEcCCcE--EEEEEeccCCCCceEEEeeCC
Q 020784 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGV 226 (321)
Q Consensus 157 ~v~iWD~~~~~--~~~~~~-~~~~v~~v~~~~~----~~~~~~-~~~I~iwd~~~~~--~~~~l~~~~~~~~~~~~s~~~ 226 (321)
+|++||+.+++ .+..+. +...|.++.|+++ .+++++ ++.|++||++++. ....+..|...+..+++++..
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 99999999886 444444 4458999999875 455555 4799999998763 334455565555555555521
Q ss_pred -----------CceEEEeecCCCCcEEEEeeCCc-----ceEEeeccccceeEEEECCC---CCEEEEEeCCCcEEEEEE
Q 020784 227 -----------GSLVLVCPGLQKGQVRVEHYASK-----RTKFIMAHDSRIACFALTQD---GQLLATSSTKGTLVRIFN 287 (321)
Q Consensus 227 -----------d~~~la~sGs~dg~V~i~d~~~~-----~~~~l~~H~~~V~~vafspd---g~~las~S~Dgt~IrIWd 287 (321)
++.+++ +|+.||.|++||+... ....+.+|...|++++|+|+ |.+|++|+.||+ |+|||
T Consensus 158 ~~~~~~~~~~~d~~~l~-sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~iwd 235 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWT 235 (753)
T ss_dssp ---------CGGGCCEE-EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EEEEE
T ss_pred cccccccccCCCCCEEE-EEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EEEec
Confidence 456777 4899999999998764 23478899999999999999 999999999999 99999
Q ss_pred cCCCcEE--EEEe--CCCc--ceeEEEeecCceEEEee
Q 020784 288 TLDGTLL--QEEC--CPSI--SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 288 ~~tg~~i--~~~~--~g~~--~~~~~~s~d~~~la~~~ 319 (321)
+.+++.. .... .++. ...++++++|++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp ESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred CCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 9987411 1111 1222 33458889999998763
No 86
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=6.1e-25 Score=198.00 Aligned_cols=223 Identities=12% Similarity=0.035 Sum_probs=170.5
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCc----eeEEeeeecCCceEEEEEecCCC-eEEEEeCCCCCCCC
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR----EIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYP 154 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~----~~~~~~~~~~~~v~~v~~~~~~~-~~~~~sg~~~~~~~ 154 (321)
...|.+.|++++|+|+|++|++|+.++ |+||++.+.+ ..... .|...+..++++++++ .+++++ .
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~-------~ 77 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGT-------V 77 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEE-------T
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEc-------C
Confidence 346888999999999999999988755 8899998876 32222 2688999999999998 888877 6
Q ss_pred CCcEEEEeC-CCCcEEEEEe--eCCceeEEEEeC-CeEEEEE-CCEEEEEEcCC---------cEEEEEEeccCCCCceE
Q 020784 155 LNKVMIWDD-HQSRCIGELS--FRSEVRSVKLRR-DRIIVVL-EQKIFVYNFAD---------LKLLHQIETIANPKGLC 220 (321)
Q Consensus 155 d~~v~iWD~-~~~~~~~~~~--~~~~v~~v~~~~-~~~~~~~-~~~I~iwd~~~---------~~~~~~l~~~~~~~~~~ 220 (321)
|+.|++||+ .+++...... +...|.+++|++ +.++++. ++.|++||+++ ++.+.++. +... +.
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~--v~ 154 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNK--IF 154 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCC--EE
T ss_pred CCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCc--eE
Confidence 799999999 8887643333 556899999995 4555554 56999999986 65555554 3333 44
Q ss_pred EEeeCCCceEEEeecCCCCcEEEEeeCC-cc--e-EEeeccccceeEEEECC-CCCEEEEEeCCCcEEEEEEcCCC----
Q 020784 221 AVSQGVGSLVLVCPGLQKGQVRVEHYAS-KR--T-KFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDG---- 291 (321)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg~V~i~d~~~-~~--~-~~l~~H~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~~tg---- 291 (321)
++...+++ ++ +|+.||.|++||+.. .. . .....|...|++++|+| ++.+|++++.||. |+||++..+
T Consensus 155 ~~~~~~~~--l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~~~~~~~ 230 (342)
T 1yfq_A 155 TMDTNSSR--LI-VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQGDDY 230 (342)
T ss_dssp EEEECSSE--EE-EEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTTCCST
T ss_pred EEEecCCc--EE-EEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEcCCCccc
Confidence 55555554 44 488999999999987 33 2 25567899999999999 9999999999999 999999887
Q ss_pred --cEEEEEeCCC----------cceeEEEeecCceEEEee
Q 020784 292 --TLLQEECCPS----------ISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 292 --~~i~~~~~g~----------~~~~~~~s~d~~~la~~~ 319 (321)
+.+.++.... ....+.+++++++|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 270 (342)
T 1yfq_A 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG 270 (342)
T ss_dssp TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE
T ss_pred ccccceeeecccccccccccceeEEEEEEcCCCCEEEEec
Confidence 7777775332 233447778899998764
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.6e-25 Score=202.31 Aligned_cols=224 Identities=10% Similarity=0.083 Sum_probs=175.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCc---------------eEEEEEecCCCeEEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGG---------------IGVVEMLFRCNILALV 145 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~---------------v~~v~~~~~~~~~~~~ 145 (321)
..|...|++++|+|+|++|++++.++ +++||+.+.+....... +... +..+.+.+++ .++++
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 223 (425)
T 1r5m_A 146 NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFEL-KETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIP 223 (425)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECC-C---------------CCCBSCCEEEETT-EEEEE
T ss_pred cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeec-cccCccceeeccccCCcceeeEEEEcCCC-EEEEE
Confidence 45778999999999999999988755 88999998877655543 2333 6666776653 45555
Q ss_pred eCCCCCCCCCCcEEEEeCCCCcEEEEEee-CCceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEE
Q 020784 146 GGGPDPQYPLNKVMIWDDHQSRCIGELSF-RSEVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCA 221 (321)
Q Consensus 146 sg~~~~~~~d~~v~iWD~~~~~~~~~~~~-~~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~ 221 (321)
+ .++.|++||+.+++.+..+.. ...|.+++|+++. ++++. ++.|++||+++++.+..+..|...+..++
T Consensus 224 ~-------~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 296 (425)
T 1r5m_A 224 G-------PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSAS 296 (425)
T ss_dssp C-------GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEE
T ss_pred c-------CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEE
Confidence 4 579999999999887777654 4589999998753 55555 57999999999998888887776665666
Q ss_pred EeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCc--------
Q 020784 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT-------- 292 (321)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~-------- 292 (321)
+++ ++ +++ +|+.||.|++||+.... +..+..|...|++++|+|+|++||+++.||. |+|||+.+++
T Consensus 297 ~~~--~~-~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~i~~~~~~~~~~~~~~~ 371 (425)
T 1r5m_A 297 WVG--DD-KVI-SCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ-VNVYDLKKLNSKSRSLYG 371 (425)
T ss_dssp EET--TT-EEE-EEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC-EEEEECHHHHC-------
T ss_pred ECC--CC-EEE-EEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe-EEEEECCCCccceeeeec
Confidence 655 44 555 48899999999997755 5688899999999999999999999999999 9999999998
Q ss_pred ------------EEEEEeCCC---cceeEEEeecCceEEEee
Q 020784 293 ------------LLQEECCPS---ISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 293 ------------~i~~~~~g~---~~~~~~~s~d~~~la~~~ 319 (321)
++.++.... ....+.+++++++|+++.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 372 NRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp -------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred ccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 888885432 333457788899998764
No 88
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=2.1e-25 Score=200.90 Aligned_cols=199 Identities=10% Similarity=0.027 Sum_probs=149.8
Q ss_pred CCCCCCeEEEEEcC--CCCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecC--CCeEEEEeCCCCCCCCC
Q 020784 82 SSPPPTLLHISFNQ--DHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPL 155 (321)
Q Consensus 82 ~~~~~~V~~v~fs~--dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~~~sg~~~~~~~d 155 (321)
..|.+.|++++|++ +|++|++|+.|+ |+|||+.+........+. |.+.|..++++++ +..+++++ .|
T Consensus 54 ~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs-------~D 126 (316)
T 3bg1_A 54 RGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGS-------SD 126 (316)
T ss_dssp ECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEEC-------SS
T ss_pred cCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEc-------CC
Confidence 46888999999986 489999998754 899999876422222221 6778999999887 56777766 68
Q ss_pred CcEEEEeCCCCcEE---EEEe-eCCceeEEEEeCC-------------------eEEEEE-CCEEEEEEcCCc---EEEE
Q 020784 156 NKVMIWDDHQSRCI---GELS-FRSEVRSVKLRRD-------------------RIIVVL-EQKIFVYNFADL---KLLH 208 (321)
Q Consensus 156 ~~v~iWD~~~~~~~---~~~~-~~~~v~~v~~~~~-------------------~~~~~~-~~~I~iwd~~~~---~~~~ 208 (321)
++|++||++.+... ..+. +...|.++.|+++ .++.++ |+.|++||++.. +.+.
T Consensus 127 ~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEE
T ss_pred CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceee
Confidence 99999999876422 1122 2346888888875 344444 579999999754 5677
Q ss_pred EEeccCCCCceEEEeeCC--CceEEEeecCCCCcEEEEeeCCc-----ceEEeeccccceeEEEECCCCCEEEEEeCCCc
Q 020784 209 QIETIANPKGLCAVSQGV--GSLVLVCPGLQKGQVRVEHYASK-----RTKFIMAHDSRIACFALTQDGQLLATSSTKGT 281 (321)
Q Consensus 209 ~l~~~~~~~~~~~~s~~~--d~~~la~sGs~dg~V~i~d~~~~-----~~~~l~~H~~~V~~vafspdg~~las~S~Dgt 281 (321)
++..|...+..+++++++ ++.+|| +|+.||+|+||+.... ....+..|...|++++|+|+|++||+|+.||+
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~la-s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTIA-SCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEEE-EEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred ecccCCCceEEEEecCCCCCCCceEE-EEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 788887776666666653 236677 6999999999998652 23456789999999999999999999999999
Q ss_pred EEEEEEcC
Q 020784 282 LVRIFNTL 289 (321)
Q Consensus 282 ~IrIWd~~ 289 (321)
|+||+..
T Consensus 286 -v~lw~~~ 292 (316)
T 3bg1_A 286 -VTLWKES 292 (316)
T ss_dssp -EEEEEEC
T ss_pred -EEEEEEC
Confidence 9999986
No 89
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=3.9e-24 Score=198.51 Aligned_cols=223 Identities=11% Similarity=0.054 Sum_probs=167.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|+|++|++|+.++ |+|||+.+.+....... |.+.|..++++++++.+++++ .|++|++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~-------~d~~v~i 207 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-HRATVTDIAIIDRGRNVLSAS-------LDGTIRL 207 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-CSSCEEEEEEETTTTEEEEEE-------TTSCEEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-CCCcEEEEEEcCCCCEEEEEc-------CCCcEEE
Confidence 57888999999999999999999865 88999998877665554 688999999999999998887 6799999
Q ss_pred EeCCCCcEEEEEeeC----CceeEEEE---------------------eCC--eEEEEE-CCEEEEEEcCCcEEEEEEec
Q 020784 161 WDDHQSRCIGELSFR----SEVRSVKL---------------------RRD--RIIVVL-EQKIFVYNFADLKLLHQIET 212 (321)
Q Consensus 161 WD~~~~~~~~~~~~~----~~v~~v~~---------------------~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~ 212 (321)
||+++++.+..+..+ ..|.++.+ +++ .++++. ++.|++||+++++.+..+..
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 999999988887642 24555554 343 344444 46999999999888777754
Q ss_pred -cCCCCceEEEeeCCCce-EEEeecCCCCcEEEEeeCCcc--eEEeec-cccceeEEEECCCCCEEEEEeCCCcEEEEEE
Q 020784 213 -IANPKGLCAVSQGVGSL-VLVCPGLQKGQVRVEHYASKR--TKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (321)
Q Consensus 213 -~~~~~~~~~~s~~~d~~-~la~sGs~dg~V~i~d~~~~~--~~~l~~-H~~~V~~vafspdg~~las~S~Dgt~IrIWd 287 (321)
|...+..+++ .+++. +++ +|+.||.|++||+.... +..+.+ |...|+++.| +++.+|++++.||+ |+|||
T Consensus 288 ~~~~~v~~~~~--~~~~~~~l~-~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~-v~iw~ 362 (420)
T 3vl1_A 288 KFTCSCNSLTV--DGNNANYIY-AGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTS-IKLDI 362 (420)
T ss_dssp TTSSCEEEEEE--CSSCTTEEE-EEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEE-EEEEE
T ss_pred ccCCCceeEEE--eCCCCCEEE-EEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCcc-EEEEe
Confidence 4444444455 44555 666 59999999999998643 567777 6777888855 57889999999999 99999
Q ss_pred cCCCcE---------EEEEeCCCc--ceeEEEeecCc----eEEEe
Q 020784 288 TLDGTL---------LQEECCPSI--SAQSGLWLSSA----WLRVL 318 (321)
Q Consensus 288 ~~tg~~---------i~~~~~g~~--~~~~~~s~d~~----~la~~ 318 (321)
+.+... ...+ .++. ...+++++|++ .+++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 363 ISDPESERPAIEFETPTFL-VSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp ECCTTCCSCEECTTSCEEE-CCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred ccCCCCCccceeccCccEE-ccCCcceEEEEEccCCCCcceEEEEc
Confidence 987321 1112 2333 34558888888 55553
No 90
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=2.6e-24 Score=197.76 Aligned_cols=221 Identities=13% Similarity=0.123 Sum_probs=164.9
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEecCCceeEEeee-ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 83 SPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 83 ~~~~~V~~v~fs~-dg~~lasg~~~g-v~vw~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
.|...|++++|+| ++++|++|+.++ |++||+........... .+...+..++++++++.+++++ .|+.|+
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~i~ 188 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD-------STGRLL 188 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE-------TTSEEE
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC-------CCCCEE
Confidence 5888999999999 789999998865 88999986433222211 0236699999999999998887 679999
Q ss_pred EEeCCCCcEEEEEee-CCceeEEEEeCC---eEEEEE-CCEEEEEEcCC----cEEEEEEeccCCCCceEEEeeCC-Cce
Q 020784 160 IWDDHQSRCIGELSF-RSEVRSVKLRRD---RIIVVL-EQKIFVYNFAD----LKLLHQIETIANPKGLCAVSQGV-GSL 229 (321)
Q Consensus 160 iWD~~~~~~~~~~~~-~~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~----~~~~~~l~~~~~~~~~~~~s~~~-d~~ 229 (321)
+||+ +++.+..+.. ...|.+++|+++ .++++. ++.|++||+++ ++.+..+ .|...+..+++ .+ ++.
T Consensus 189 i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~--s~~~~~ 264 (383)
T 3ei3_B 189 LLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYF--NPTDST 264 (383)
T ss_dssp EEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEE--CTTTSC
T ss_pred EEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEE--cCCCCC
Confidence 9999 4666666664 458999999986 355554 56999999987 6677776 45554444444 45 557
Q ss_pred EEEeecCCCCcEEEEeeCCcc-eEEeeccc-----------------cceeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 020784 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHD-----------------SRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~~~~-~~~l~~H~-----------------~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg 291 (321)
+|+ +|+.||.|++||+.+.. ...+.+|. ..+..++|+|+|++ +|+.||+ |+|||+.++
T Consensus 265 ~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~-i~iwd~~~~ 340 (383)
T 3ei3_B 265 KLL-TTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRT-IDIYDANSG 340 (383)
T ss_dssp EEE-EEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCC-EEEEETTTC
T ss_pred EEE-EEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCe-EEEEecCCC
Confidence 787 48899999999987654 34555543 33445777787776 7889999 999999999
Q ss_pred cEEEEEeCCC-cc--eeEEEeecCceEEEe
Q 020784 292 TLLQEECCPS-IS--AQSGLWLSSAWLRVL 318 (321)
Q Consensus 292 ~~i~~~~~g~-~~--~~~~~s~d~~~la~~ 318 (321)
+++.++...+ .. ..+.+++++++|+.+
T Consensus 341 ~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 341 GLVHQLRDPNAAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp CEEEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred ceeeeecCCCCCceEEEEEEecCccEEEEe
Confidence 9999996422 22 234788999999876
No 91
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=8.3e-25 Score=197.19 Aligned_cols=194 Identities=7% Similarity=0.023 Sum_probs=132.0
Q ss_pred CCCCCCeEEEEEcCC----CCEEEEEcC---------------------CcEEEEEecC-CceeEEeeeecCCceEEEEE
Q 020784 82 SSPPPTLLHISFNQD----HGCFAAGTD---------------------HGFRIYNCDP-FREIFRRDFERGGGIGVVEM 135 (321)
Q Consensus 82 ~~~~~~V~~v~fs~d----g~~lasg~~---------------------~gv~vw~~~~-~~~~~~~~~~~~~~v~~v~~ 135 (321)
..+-..|++++|+|| ++++++++. +.|++|++.+ ++.+..... |...+..+++
T Consensus 108 ~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~-~~~~v~~l~f 186 (356)
T 2w18_A 108 NLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFL-MPPEETILTF 186 (356)
T ss_dssp SSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEE-CCCSSCEEEE
T ss_pred cccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeecc-CCCceeeEEe
Confidence 445568999999999 888887653 3355555533 333222222 4445555555
Q ss_pred ec---CCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCC----ceeEEEEeCCeEEE--------------EE-C
Q 020784 136 LF---RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS----EVRSVKLRRDRIIV--------------VL-E 193 (321)
Q Consensus 136 ~~---~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~----~v~~v~~~~~~~~~--------------~~-~ 193 (321)
++ ++..++.++ .|++|||||+++++++.++..+. .+.++.|+++...+ +. +
T Consensus 187 s~~~g~~~~LaSgS-------~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D 259 (356)
T 2w18_A 187 AEVQGMQEALLGTT-------IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV 259 (356)
T ss_dssp EEEETSTTEEEEEE-------TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CC
T ss_pred eccCCCCceEEEec-------CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence 55 445555555 68999999999999999987432 46667788765432 11 3
Q ss_pred CEEEEEEcCCcEEEEEEe-----ccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeecccccee-EEEE
Q 020784 194 QKIFVYNFADLKLLHQIE-----TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIA-CFAL 266 (321)
Q Consensus 194 ~~I~iwd~~~~~~~~~l~-----~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~-~vaf 266 (321)
++|++||..+++.+..+. +|.. ...+.+.+ +.++| +|+.||+|+|||+.++. +.+|.+|...|. +++|
T Consensus 260 ~tIklWd~~tgk~l~v~~~~~p~Gh~~--~~lsg~~s--g~~lA-SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vaf 334 (356)
T 2w18_A 260 FQLIVINPKTTLSVGVMLYCLPPGQAG--RFLEGDVK--DHCAA-AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKW 334 (356)
T ss_dssp EEEEEEETTTTEEEEEEEECCCTTCCC--CEEEEEEE--TTEEE-EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEE
T ss_pred cEEEEEECCCCEEEEEEEeeccCCCcc--eeEccccC--CCEEE-EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEE
Confidence 599999999999887663 2222 13333332 35666 69999999999999876 668999987655 6999
Q ss_pred CCCCCEEEEEeCCCcEEEEEEcC
Q 020784 267 TQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 267 spdg~~las~S~Dgt~IrIWd~~ 289 (321)
||||++|||||.|++ |||||+.
T Consensus 335 SPDG~~LaSGS~D~T-IklWd~~ 356 (356)
T 2w18_A 335 SGTDSHLLAGQKDGN-IFVYHYS 356 (356)
T ss_dssp CSSSSEEEEECTTSC-EEEEEEC
T ss_pred CCCCCEEEEEECCCc-EEEecCC
Confidence 999999999999999 9999963
No 92
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=1.8e-23 Score=188.02 Aligned_cols=225 Identities=12% Similarity=0.072 Sum_probs=172.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|++++|+|||++|++|+.++ +++|+............ +...+....+.+.++.+++++ .|+.+++
T Consensus 83 ~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~s-------~d~~~~~ 154 (340)
T 4aow_A 83 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG-HTKDVLSVAFSSDNRQIVSGS-------RDKTIKL 154 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSSCEEEEE-------TTSCEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecC-CCCceeEEEEeecCccceeec-------CCCeEEE
Confidence 56888999999999999999999866 77999988776655544 466777778888888888877 6799999
Q ss_pred EeCCCCcEEEEE-e-eCCceeEEEEeCC---e-EEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 161 WDDHQSRCIGEL-S-FRSEVRSVKLRRD---R-IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 161 WD~~~~~~~~~~-~-~~~~v~~v~~~~~---~-~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
||.......... . +...+..+.|..+ . ++.+. ++.|++||+++++.+..+..|...+..+++++ ++.+|+
T Consensus 155 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~- 231 (340)
T 4aow_A 155 WNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP--DGSLCA- 231 (340)
T ss_dssp ECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEEE-
T ss_pred EEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC--CCCEEE-
Confidence 998876543322 2 2346888888653 2 33343 56999999999999999998877766666554 567888
Q ss_pred ecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC--------CCccee
Q 020784 234 PGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC--------PSISAQ 305 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~--------g~~~~~ 305 (321)
+|+.||.|++||+..........+...|.+++|+|++.+++ ++.|++ |+|||++++.++.++.. ++...+
T Consensus 232 s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 232 SGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC-AATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp EEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEE-EEETTE-EEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred EEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceee-ccCCCE-EEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 59999999999998766443334567899999999987655 556999 99999999998887642 333333
Q ss_pred --EEEeecCceEEEee
Q 020784 306 --SGLWLSSAWLRVLR 319 (321)
Q Consensus 306 --~~~s~d~~~la~~~ 319 (321)
+++++||++|+++.
T Consensus 310 ~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 310 TSLAWSADGQTLFAGY 325 (340)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEe
Confidence 47788999998864
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.3e-23 Score=190.37 Aligned_cols=230 Identities=7% Similarity=0.022 Sum_probs=179.3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...|...|++++|+|+|++|++|+.++ |+|||+.+.+...... +...+..++++++++.+++++... ...++.|+
T Consensus 70 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~--~~~~g~i~ 145 (369)
T 3zwl_B 70 LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNV--MKNPGSIN 145 (369)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCB--TTBCCEEE
T ss_pred hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCc--cCCCCEEE
Confidence 356888999999999999999998866 8899999988776666 478899999999999988887220 00238999
Q ss_pred EEeCCCCcEE-----------EEEe-eCC--ceeEEEEeCC--eEEEEE-CCEEEEEEcCC-cEEEEEEeccCCCCceEE
Q 020784 160 IWDDHQSRCI-----------GELS-FRS--EVRSVKLRRD--RIIVVL-EQKIFVYNFAD-LKLLHQIETIANPKGLCA 221 (321)
Q Consensus 160 iWD~~~~~~~-----------~~~~-~~~--~v~~v~~~~~--~~~~~~-~~~I~iwd~~~-~~~~~~l~~~~~~~~~~~ 221 (321)
+||+..+... ..+. +.. .+.+++|+++ .++++. ++.|++||+++ .+.+..+..|...+..++
T Consensus 146 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 225 (369)
T 3zwl_B 146 IYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQ 225 (369)
T ss_dssp EEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEE
T ss_pred EEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEE
Confidence 9998765321 1111 222 7888999875 455554 47999999988 788888988876655555
Q ss_pred EeeCCCceEEEeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCC--------------cEEEEEE
Q 020784 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG--------------TLVRIFN 287 (321)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dg--------------t~IrIWd 287 (321)
+++ ++.+|+ +|+.||.|++||+.+........|...+.+++|+|+++++++++.++ . |++||
T Consensus 226 ~~~--~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-i~~~d 301 (369)
T 3zwl_B 226 FSP--DLTYFI-TSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE-ARFYH 301 (369)
T ss_dssp ECT--TSSEEE-EEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CE-EEEEE
T ss_pred ECC--CCCEEE-EecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce-eEEEe
Confidence 555 557777 48899999999998876554344889999999999999999999998 7 99999
Q ss_pred cCCCcEEEEEeCCCccee--EEEeecCceEEEee
Q 020784 288 TLDGTLLQEECCPSISAQ--SGLWLSSAWLRVLR 319 (321)
Q Consensus 288 ~~tg~~i~~~~~g~~~~~--~~~s~d~~~la~~~ 319 (321)
+.+++++..+. ++...+ +.+++++++|+++.
T Consensus 302 ~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 302 KIFEEEIGRVQ-GHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp TTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCcchhhee-cccCcEEEEEECCCCCEEEEEc
Confidence 99999999885 444333 47778999998864
No 94
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=1.1e-23 Score=196.75 Aligned_cols=221 Identities=16% Similarity=0.125 Sum_probs=178.6
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
.++.|+|+++ .+||+|.++.|+|||..+++......+. |...|.+++|+++++.+++++ .|++|+|||+++
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs-------~Dg~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-------SSAEVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------TTSCEEEEETTT
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE-------CCCeEEEEEcCC
Confidence 3567999986 5899999999999999999876555542 456799999999999999888 689999999999
Q ss_pred CcEEEEEeeC-CceeEEEEeCCeEEEEEC-CEEEEEEcCC-cEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEE
Q 020784 166 SRCIGELSFR-SEVRSVKLRRDRIIVVLE-QKIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVR 242 (321)
Q Consensus 166 ~~~~~~~~~~-~~v~~v~~~~~~~~~~~~-~~I~iwd~~~-~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~ 242 (321)
++.+..+..+ ..+.++.+++..++.+.. +.+++||... ...+.++..|...+ +.+...+++.+++ +|+.||.|+
T Consensus 179 ~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~--~~~~~~~~g~~l~-s~~~D~~v~ 255 (420)
T 4gga_A 179 QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV--CGLRWAPDGRHLA-SGGNDNLVN 255 (420)
T ss_dssp TEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE--EEEEECTTSSEEE-EEETTSCEE
T ss_pred CcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccce--eeeeecCCCCeee-eeeccccce
Confidence 9998888765 478899999988888764 6999999865 55667777776654 4444555668888 599999999
Q ss_pred EEeeCCcc-----eEEeeccccceeEEEECCCC-CEEEE--EeCCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCce
Q 020784 243 VEHYASKR-----TKFIMAHDSRIACFALTQDG-QLLAT--SSTKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAW 314 (321)
Q Consensus 243 i~d~~~~~-----~~~l~~H~~~V~~vafspdg-~~las--~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~ 314 (321)
+|+...+. +..+..|...|.+++|+|++ .+|++ |+.|++ |+|||+.+|+++..+..........+++++.+
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~ 334 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDAHSQVCSILWSPHYKE 334 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEECSSCEEEEEEETTTTE
T ss_pred EEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeeccccceeeeeecCCCCe
Confidence 99987542 45778899999999999975 55655 458999 99999999999999987666666788889988
Q ss_pred EEEee
Q 020784 315 LRVLR 319 (321)
Q Consensus 315 la~~~ 319 (321)
|+++.
T Consensus 335 lv~~s 339 (420)
T 4gga_A 335 LISGH 339 (420)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87653
No 95
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=2.3e-23 Score=195.68 Aligned_cols=218 Identities=15% Similarity=0.183 Sum_probs=178.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..|...|.+++|+ +.+|++|+.++ |++||+.+++....... |.+.+.++.+ +++.+++++ .|++|++
T Consensus 156 ~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~s~s-------~dg~i~~ 223 (445)
T 2ovr_B 156 VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHL--HEKRVVSGS-------RDATLRV 223 (445)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEE--ETTEEEEEE-------TTSEEEE
T ss_pred cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECC-CCCcEEEEEe--cCCEEEEEe-------CCCEEEE
Confidence 5688899999998 66888888755 88999999887665553 5677777665 567777777 6799999
Q ss_pred EeCCCCcEEEEEeeC-CceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC
Q 020784 161 WDDHQSRCIGELSFR-SEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (321)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d 238 (321)
||+.+++.+..+..+ ..|.++.++++.++++. ++.|++||+++++.+.++..|...+..++ + ++..++ +|+.|
T Consensus 224 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~--~--~~~~l~-~~~~d 298 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ--F--DGIHVV-SGSLD 298 (445)
T ss_dssp EESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEE--E--CSSEEE-EEETT
T ss_pred EECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEE--E--CCCEEE-EEeCC
Confidence 999999988887654 57999999888888876 46999999999999999988766544444 4 346676 48999
Q ss_pred CcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC--CCcceeEEEeecCceE
Q 020784 239 GQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC--PSISAQSGLWLSSAWL 315 (321)
Q Consensus 239 g~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~--g~~~~~~~~s~d~~~l 315 (321)
|.|++||+.++. +..+.+|...|.+++++ +.+|++|+.||+ |+|||+++++++.++.. ++...+.++.+++.+|
T Consensus 299 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 375 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 375 (445)
T ss_dssp SCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSC-EEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEE
T ss_pred CeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEE
Confidence 999999998765 66899999999999884 679999999999 99999999999999864 2556677888899999
Q ss_pred EEee
Q 020784 316 RVLR 319 (321)
Q Consensus 316 a~~~ 319 (321)
+++.
T Consensus 376 ~s~~ 379 (445)
T 2ovr_B 376 ITSS 379 (445)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8864
No 96
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.3e-24 Score=200.53 Aligned_cols=206 Identities=13% Similarity=0.175 Sum_probs=155.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEec---CCceeEEee--------ee---cCCceEEEEE--ecCCCeEEEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCD---PFREIFRRD--------FE---RGGGIGVVEM--LFRCNILALV 145 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~---~~~~~~~~~--------~~---~~~~v~~v~~--~~~~~~~~~~ 145 (321)
.|...|++++|+|++++|++|+.++ |+|||++ .++...... +. +...+..+.+ .++++.++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 5788999999999999999999866 8899985 443322211 10 1234444443 2456677776
Q ss_pred eCCCCCCCCCCcEEEEeCCCCcEEEEEee---CCceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEEEEEe-ccCCCCc
Q 020784 146 GGGPDPQYPLNKVMIWDDHQSRCIGELSF---RSEVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLLHQIE-TIANPKG 218 (321)
Q Consensus 146 sg~~~~~~~d~~v~iWD~~~~~~~~~~~~---~~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~~~l~-~~~~~~~ 218 (321)
+ .|++|++||+++++.+..+.. ...|.+++|+++. +++++ ++.|++||+++++.++++. .+...+.
T Consensus 189 ~-------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 189 T-------NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPIT 261 (437)
T ss_dssp E-------TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEE
T ss_pred e-------CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceE
Confidence 6 679999999999999888875 4689999998754 55555 4699999999999999886 4544444
Q ss_pred eEEEee--CCCceEEEeecCCCCcEEEEeeCCcc-eEEeec--------------------------cccceeEEEECCC
Q 020784 219 LCAVSQ--GVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA--------------------------HDSRIACFALTQD 269 (321)
Q Consensus 219 ~~~~s~--~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~--------------------------H~~~V~~vafspd 269 (321)
.+++++ .+++.+++ +|+.||.|++||+..+. +..+.+ |...|++++|+ +
T Consensus 262 ~~~~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVV-GGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp EEEECTTTCTTEEEEE-EESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred EEEeccccCCCccEEE-EEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 554443 35677887 59999999999997654 344442 66779999999 7
Q ss_pred CCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 270 GQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 270 g~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
+++|++|+.||+ |+|||+.+++++..+.
T Consensus 340 ~~~l~s~~~d~~-i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 340 DKILLTDEATSS-IVMFSLNELSSSKAVI 367 (437)
T ss_dssp TEEEEEEGGGTE-EEEEETTCGGGCEEEE
T ss_pred ceEEEecCCCCe-EEEEECCCcccceEEe
Confidence 899999999999 9999999999888775
No 97
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.8e-25 Score=215.31 Aligned_cols=196 Identities=10% Similarity=0.046 Sum_probs=149.0
Q ss_pred CCCCCeEEEEEcCC------CCEEEEEcCCc-EEEEEecCCcee-----------EEeeeecCCceEEEEEecCCCeEEE
Q 020784 83 SPPPTLLHISFNQD------HGCFAAGTDHG-FRIYNCDPFREI-----------FRRDFERGGGIGVVEMLFRCNILAL 144 (321)
Q Consensus 83 ~~~~~V~~v~fs~d------g~~lasg~~~g-v~vw~~~~~~~~-----------~~~~~~~~~~v~~v~~~~~~~~~~~ 144 (321)
.|.+.|++|+|+|+ +.+||+|+.|+ |+|||+...+.. ..... |.+.+.+++++++ ..+++
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~-h~~~v~sv~~s~~-~~las 282 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL-ADSLITTFDFLSP-TTVVC 282 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC-TTTCEEEEEESSS-SEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc-CCCCEEEEEecCC-CeEEE
Confidence 35578999999997 57999998765 899999765321 12222 5678889888764 46666
Q ss_pred EeCCCCCCCCCCcEEEEeCCCCc-EEEEEee-CCceeEE--EEeCC---eEEEEE-CCEEEEEEcCCcEEEEEEeccCC-
Q 020784 145 VGGGPDPQYPLNKVMIWDDHQSR-CIGELSF-RSEVRSV--KLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIAN- 215 (321)
Q Consensus 145 ~sg~~~~~~~d~~v~iWD~~~~~-~~~~~~~-~~~v~~v--~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~- 215 (321)
++ .|++|++||++++. ....+.. ...|.+| .+.++ .++.++ |++|++||+++++.+.++.+|..
T Consensus 283 gs-------~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 283 GF-------KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp EE-------TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred Ee-------CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 66 68999999999764 3344544 4589998 45654 345554 57999999998887777776643
Q ss_pred -CCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 020784 216 -PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 216 -~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg 291 (321)
.+..++++++ +..++ +|+.|++|++||..... +.++.+|.+.|++|+|+|+|++|||||.||+ |+|||+..+
T Consensus 356 ~~v~~v~fsp~--~~~l~-s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~ 429 (524)
T 2j04_B 356 SNLVPVVYCPQ--IYSYI-YSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARR 429 (524)
T ss_dssp CSCCCEEEETT--TTEEE-EECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSS
T ss_pred CcccceEeCCC--cCeEE-EeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHh
Confidence 2445666664 46676 48889999999988755 5788999999999999999999999999999 999998754
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.4e-23 Score=183.79 Aligned_cols=216 Identities=12% Similarity=0.159 Sum_probs=164.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCc---eeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~---~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
..|...|++++|+|++++|++|+.++ +++|++.... ....... |...+..+.+ +++.+++++ .|+.
T Consensus 56 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~~l~~~~-------~d~~ 125 (313)
T 3odt_A 56 YTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIG-HQGNVCSLSF--QDGVVISGS-------WDKT 125 (313)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECC-CSSCEEEEEE--ETTEEEEEE-------TTSE
T ss_pred ecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhh-cccCEEEEEe--cCCEEEEEe-------CCCC
Confidence 45678999999999999999998866 7899986542 2222322 5677777766 677888777 6799
Q ss_pred EEEEeCCCCcEEEEEee-CCceeEEEEeC---CeEEEEE-CCEEEEEEcCCcEEEEEEec-cCCCCceEEEeeCCCceEE
Q 020784 158 VMIWDDHQSRCIGELSF-RSEVRSVKLRR---DRIIVVL-EQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVL 231 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~~-~~~v~~v~~~~---~~~~~~~-~~~I~iwd~~~~~~~~~l~~-~~~~~~~~~~s~~~d~~~l 231 (321)
|++|| .++.+..+.. ...+.++.+.+ +.++++. ++.|++|| ..+.+..+.. +...+..+++++++ . +
T Consensus 126 i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~--~-~ 198 (313)
T 3odt_A 126 AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDG--H-F 198 (313)
T ss_dssp EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETT--E-E
T ss_pred EEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCC--e-E
Confidence 99999 5566666654 45788888854 4566665 46999999 4566677776 65666666666654 5 5
Q ss_pred EeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCc-ceeEEEe
Q 020784 232 VCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSI-SAQSGLW 309 (321)
Q Consensus 232 a~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~-~~~~~~s 309 (321)
+ +|+.||.|++||+..+. +..+.+|...|++++|+|+| +|++++.||+ |+|||+++++++.++..... ...+.++
T Consensus 199 ~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-v~iwd~~~~~~~~~~~~~~~~i~~~~~~ 275 (313)
T 3odt_A 199 I-SCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT-VRIWSKENGSLKQVITLPAISIWSVDCM 275 (313)
T ss_dssp E-EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE-EEEECTTTCCEEEEEECSSSCEEEEEEC
T ss_pred E-EccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE-EEEEECCCCceeEEEeccCceEEEEEEc
Confidence 5 48999999999998655 66889999999999999999 5889999999 99999999999999864432 2345777
Q ss_pred ecCceEEE
Q 020784 310 LSSAWLRV 317 (321)
Q Consensus 310 ~d~~~la~ 317 (321)
+++++++.
T Consensus 276 ~~~~~~~~ 283 (313)
T 3odt_A 276 SNGDIIVG 283 (313)
T ss_dssp TTSCEEEE
T ss_pred cCCCEEEE
Confidence 88886653
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=196.56 Aligned_cols=202 Identities=11% Similarity=0.107 Sum_probs=153.1
Q ss_pred cCCCCCCeEEEE------EcCCCCEEEEEcCCc-EEEEEecCCc-eeEEeeeecCC----ceEEEE----EecCCCeEEE
Q 020784 81 SSSPPPTLLHIS------FNQDHGCFAAGTDHG-FRIYNCDPFR-EIFRRDFERGG----GIGVVE----MLFRCNILAL 144 (321)
Q Consensus 81 ~~~~~~~V~~v~------fs~dg~~lasg~~~g-v~vw~~~~~~-~~~~~~~~~~~----~v~~v~----~~~~~~~~~~ 144 (321)
...|...|+++. |++++++|++|+.++ +++||+.+.+ ....... +.+ .+..+. ++++++.+++
T Consensus 107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~ 185 (357)
T 3i2n_A 107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP-VQGENKRDCWTVAFGNAYNQEERVVCA 185 (357)
T ss_dssp ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred EEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc-cCCCCCCceEEEEEEeccCCCCCEEEE
Confidence 356888999995 578999999998865 8899998776 3333332 222 566666 4567888887
Q ss_pred EeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeC-----CeEEEEE-CCEEEEEEcCCcEEEEEEe-----cc
Q 020784 145 VGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-----DRIIVVL-EQKIFVYNFADLKLLHQIE-----TI 213 (321)
Q Consensus 145 ~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~-----~~~~~~~-~~~I~iwd~~~~~~~~~l~-----~~ 213 (321)
++ .|+.|++||+++++......+...|.+++|++ +.++++. ++.|++||+++++.+..+. .|
T Consensus 186 ~~-------~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 258 (357)
T 3i2n_A 186 GY-------DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH 258 (357)
T ss_dssp EE-------TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC
T ss_pred Ec-------cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC
Confidence 77 67999999999999877777788999999986 3455555 5799999998766655554 66
Q ss_pred CCCCceEEEeeCCCce-EEEeecCCCCcEEEEeeCC--------------------cceEEeeccccceeEEEECCCCCE
Q 020784 214 ANPKGLCAVSQGVGSL-VLVCPGLQKGQVRVEHYAS--------------------KRTKFIMAHDSRIACFALTQDGQL 272 (321)
Q Consensus 214 ~~~~~~~~~s~~~d~~-~la~sGs~dg~V~i~d~~~--------------------~~~~~l~~H~~~V~~vafspdg~~ 272 (321)
...+..+++++ ++. +++ +|+.||.|++||+.. ..+..+.+|...|++++|+|+|++
T Consensus 259 ~~~v~~~~~~~--~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 335 (357)
T 3i2n_A 259 KSTVWQVRHLP--QNRELFL-TAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRG 335 (357)
T ss_dssp SSCEEEEEEET--TEEEEEE-EEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTT
T ss_pred cCCEEEEEECC--CCCcEEE-EEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCe
Confidence 66555555554 556 566 599999999999864 235678899999999999999999
Q ss_pred EE-EEeCCCcEEEEEEcCCCcEE
Q 020784 273 LA-TSSTKGTLVRIFNTLDGTLL 294 (321)
Q Consensus 273 la-s~S~Dgt~IrIWd~~tg~~i 294 (321)
|| |++.||+ |+|||+.+++++
T Consensus 336 l~~s~~~d~~-i~iw~~~~~~~i 357 (357)
T 3i2n_A 336 LCVCSSFDQT-VRVLIVTKLNKI 357 (357)
T ss_dssp EEEEEETTSE-EEEEEECC----
T ss_pred EEEEecCCCc-EEEEECCCcccC
Confidence 98 8999999 999999987653
No 100
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=202.95 Aligned_cols=199 Identities=9% Similarity=0.076 Sum_probs=147.9
Q ss_pred CCeEEEEEcCCC--CEEEEEcCCc-EEEEEecCCceeE---------------------------------------Eee
Q 020784 86 PTLLHISFNQDH--GCFAAGTDHG-FRIYNCDPFREIF---------------------------------------RRD 123 (321)
Q Consensus 86 ~~V~~v~fs~dg--~~lasg~~~g-v~vw~~~~~~~~~---------------------------------------~~~ 123 (321)
..|++++|+|++ .+|++|+.++ |+||++....... ...
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 789999999998 7888887755 8899987643210 111
Q ss_pred eecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC-CcEEEEE--------eeCCceeEEEEeCCe---EEEE
Q 020784 124 FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCIGEL--------SFRSEVRSVKLRRDR---IIVV 191 (321)
Q Consensus 124 ~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~-~~~~~~~--------~~~~~v~~v~~~~~~---~~~~ 191 (321)
..|...|..++++++++.++++ .|++|++||+++ ++.+..+ .+...|.+++|+++. ++++
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA--------DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS 245 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE--------CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe--------CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE
Confidence 1267889999999999888764 269999999984 4444433 234579999999863 5555
Q ss_pred E-CCEEEEEEcCCcEE----EEEEeccCCC----------CceEEEeeCCCceEEEeecCCCCcEEEEeeCC-c-ceEEe
Q 020784 192 L-EQKIFVYNFADLKL----LHQIETIANP----------KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-K-RTKFI 254 (321)
Q Consensus 192 ~-~~~I~iwd~~~~~~----~~~l~~~~~~----------~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~-~-~~~~l 254 (321)
+ ++.|++||+++++. ++.+..+..+ ..+.++.+.+++.+|++ |+. |.|++||+.. + .+..+
T Consensus 246 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 246 SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT-RDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE-EES-SEEEEEETTCCSSCSCCE
T ss_pred eCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE-eeC-CeEEEEeCCCCcccccee
Confidence 5 46999999998876 6778776541 13444555556788884 676 9999999975 3 46688
Q ss_pred eccccc---------------eeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEE
Q 020784 255 MAHDSR---------------IACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (321)
Q Consensus 255 ~~H~~~---------------V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~ 295 (321)
.+|... +..++|+|+|++||+|+.||+ |+|||+.+++.+.
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~-v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNF-FRMFDRNTKRDIT 378 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTE-EEEEETTTCCEEE
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEeccCCE-EEEEEcCCCccee
Confidence 888643 334999999999999999999 9999999999874
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=3.6e-25 Score=232.41 Aligned_cols=223 Identities=16% Similarity=0.203 Sum_probs=185.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
+...|.+++|+|+|+++++|+.+| +++|++.+++....... |.+.+..++++++++.+++++ .|++|++||
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~-------~dg~i~vwd 1031 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG-HKKAVRHIQFTADGKTLISSS-------EDSVIQVWN 1031 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC-CSSCCCCEEECSSSSCEEEEC-------SSSBEEEEE
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc-CCCceEEEEECCCCCEEEEEc-------CCCEEEEEE
Confidence 346899999999999999999866 88999998877655544 678899999999999998887 679999999
Q ss_pred CCCCcEEEEEeeCCceeEEEEeCCeEEEE--ECCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCc
Q 020784 163 DHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (321)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~--~~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~ 240 (321)
+.+++......+...|.++.++++..+++ .++.|++||+.+++.+..+..|...+..++++++ +.+++ +|+.||.
T Consensus 1032 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~-s~s~d~~ 1108 (1249)
T 3sfz_A 1032 WQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSD--ATKFS-STSADKT 1108 (1249)
T ss_dssp TTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSS--SSSCE-EECCSSC
T ss_pred CCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCC--CCEEE-EEcCCCc
Confidence 99998876666677899999988654433 3579999999999999999998888877887765 46777 4899999
Q ss_pred EEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE--------eCCCc--ceeEEEe
Q 020784 241 VRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEE--------CCPSI--SAQSGLW 309 (321)
Q Consensus 241 V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~--------~~g~~--~~~~~~s 309 (321)
|++||+.+.. +..+.+|.+.|++++|+|+|++||+|+.||+ |+|||+.+|+++.++ ..++. ...++|+
T Consensus 1109 v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs 1187 (1249)
T 3sfz_A 1109 AKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGE-IRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFS 1187 (1249)
T ss_dssp CCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSC-CCEEESSSSCCCCCCCCCC-------CCSCCCEEEEC
T ss_pred EEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCE-EEEEECCCCceEEEeccccccccccccCceEEEEEEC
Confidence 9999988655 6689999999999999999999999999999 999999999987654 12233 4456889
Q ss_pred ecCceEEEe
Q 020784 310 LSSAWLRVL 318 (321)
Q Consensus 310 ~d~~~la~~ 318 (321)
+||++|+++
T Consensus 1188 ~dg~~l~s~ 1196 (1249)
T 3sfz_A 1188 PDSKTLVSA 1196 (1249)
T ss_dssp TTSSCEEEE
T ss_pred CCCCEEEEC
Confidence 999999875
No 102
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.4e-23 Score=191.14 Aligned_cols=204 Identities=11% Similarity=0.017 Sum_probs=155.3
Q ss_pred CCCCCCeEEEEEcCC--CCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecC--CCeEEEEeCCCCCCCCC
Q 020784 82 SSPPPTLLHISFNQD--HGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPL 155 (321)
Q Consensus 82 ~~~~~~V~~v~fs~d--g~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~~~sg~~~~~~~d 155 (321)
..|...|++++|+++ +++|++|+.++ |+|||+.+.+......+. |...+..++++++ ++.+++++ .|
T Consensus 52 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-------~d 124 (379)
T 3jrp_A 52 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-------SD 124 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-------TT
T ss_pred cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec-------CC
Confidence 467889999999987 99999999865 889999988633233222 6788999999998 88888887 67
Q ss_pred CcEEEEeCCCCcE--EEEE-eeCCceeEEEEeC---------------CeEEEEE-CCEEEEEEcCCc----EEEEEEec
Q 020784 156 NKVMIWDDHQSRC--IGEL-SFRSEVRSVKLRR---------------DRIIVVL-EQKIFVYNFADL----KLLHQIET 212 (321)
Q Consensus 156 ~~v~iWD~~~~~~--~~~~-~~~~~v~~v~~~~---------------~~~~~~~-~~~I~iwd~~~~----~~~~~l~~ 212 (321)
+.|++||++++.. ...+ .+...|.+++|++ ..++++. ++.|++||++++ ..+..+..
T Consensus 125 ~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 125 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 9999999988743 2233 3445899999987 2355554 579999999654 35566777
Q ss_pred cCCCCceEEEeeCCC-ceEEEeecCCCCcEEEEeeCCcc----eE--EeeccccceeEEEECCCCCEEEEEeCCCcEEEE
Q 020784 213 IANPKGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYASKR----TK--FIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (321)
Q Consensus 213 ~~~~~~~~~~s~~~d-~~~la~sGs~dg~V~i~d~~~~~----~~--~l~~H~~~V~~vafspdg~~las~S~Dgt~IrI 285 (321)
|...+..++++++.. +.+|+ +|+.||.|++||+.... .. ....|...|++++|+|+|++||+++.||. |+|
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-i~i 282 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLA-SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-VTL 282 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEE-EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSS-EEE
T ss_pred ccCcEeEEEECCCCCCCCeEE-EEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCc-EEE
Confidence 766655566655410 57777 58999999999998752 22 23448999999999999999999999999 999
Q ss_pred EEcCCCcEE
Q 020784 286 FNTLDGTLL 294 (321)
Q Consensus 286 Wd~~tg~~i 294 (321)
||+.++...
T Consensus 283 w~~~~~~~~ 291 (379)
T 3jrp_A 283 WKENLEGKW 291 (379)
T ss_dssp EEEEETTEE
T ss_pred EeCCCCCcc
Confidence 999865433
No 103
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=1.3e-22 Score=186.62 Aligned_cols=221 Identities=10% Similarity=0.050 Sum_probs=177.5
Q ss_pred CCeEEEEEcCCCCEE-EEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHGCF-AAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~~l-asg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
..+.+++|+|||++| ++++. +.+++||+.+++....... .+.+..++++++++.+++++. .+++|++||+
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~~------~~~~v~v~d~ 103 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA--GSSPQGVAVSPDGKQVYVTNM------ASSTLSVIDT 103 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEET------TTTEEEEEET
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC--CCCccceEECCCCCEEEEEEC------CCCEEEEEEC
Confidence 468999999999977 56654 5688999999887666654 568899999999998877653 3589999999
Q ss_pred CCCcEEEEEeeCCceeEEEEeCC--eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCC
Q 020784 164 HQSRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (321)
Q Consensus 164 ~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg 239 (321)
.+++.+..+..+..+.+++|+++ .++++. ++.|++||+.+++.+..+..+..+ ..+..++++..++++++.+|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 104 TSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP---KGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSE---EEEEECTTSSEEEEEETTTT
T ss_pred CCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCc---ceEEECCCCCEEEEEeCCCC
Confidence 99999888888888999999876 454443 469999999999999888776433 34444556666644688899
Q ss_pred cEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEe---CCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEE
Q 020784 240 QVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS---TKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLR 316 (321)
Q Consensus 240 ~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S---~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la 316 (321)
.|++||..++.......|...+.+++|+|+|++|++++ .|+. |++||+.+++++..+..+.....+.+++++++|.
T Consensus 181 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVY 259 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEEEECCSSEEEEEECTTSSEEE
T ss_pred EEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEEEecCCCccEEEEccCCCEEE
Confidence 99999998877655555777899999999999999888 6888 9999999999999997766655678889999886
Q ss_pred Ee
Q 020784 317 VL 318 (321)
Q Consensus 317 ~~ 318 (321)
++
T Consensus 260 ~s 261 (391)
T 1l0q_A 260 VA 261 (391)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 104
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=6.9e-24 Score=193.09 Aligned_cols=197 Identities=9% Similarity=-0.026 Sum_probs=157.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeee-ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
..|...|++++|+|+|++|++|+.++ +++||+.+.+....... .|...+..++++++++.+++++ .|+.|+
T Consensus 49 ~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~v~ 121 (372)
T 1k8k_C 49 KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-------GSRVIS 121 (372)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-------TTSSEE
T ss_pred cCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-------CCCEEE
Confidence 35778999999999999999998865 88999988875444332 2577899999999999998888 679999
Q ss_pred EEeCCCCcE---EEEEe--eCCceeEEEEeCC--eEEEEE-CCEEEEEEc------------------CCcEEEEEEecc
Q 020784 160 IWDDHQSRC---IGELS--FRSEVRSVKLRRD--RIIVVL-EQKIFVYNF------------------ADLKLLHQIETI 213 (321)
Q Consensus 160 iWD~~~~~~---~~~~~--~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~------------------~~~~~~~~l~~~ 213 (321)
+||++.+.. ...+. +...|.+++|+++ .++++. ++.|++||+ ..++.+..+..|
T Consensus 122 i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (372)
T 1k8k_C 122 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS 201 (372)
T ss_dssp EEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC
T ss_pred EEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC
Confidence 999987762 22332 3457999999875 455554 579999995 367888888877
Q ss_pred CCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 020784 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~t 290 (321)
...+..+++++ ++.+|+ +|+.||.|++||+..+. +..+..|...|++++|+|+|.+|++| .|+. |+||++.+
T Consensus 202 ~~~v~~~~~~~--~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~-i~i~~~~~ 274 (372)
T 1k8k_C 202 CGWVHGVCFSA--NGSRVA-WVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCF-PVLFTYDS 274 (372)
T ss_dssp SSCEEEEEECS--SSSEEE-EEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSS-CEEEEEET
T ss_pred CCeEEEEEECC--CCCEEE-EEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCe-EEEEEccC
Confidence 66555555554 557777 48999999999997654 67899999999999999999999988 7999 99999988
No 105
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=4.9e-24 Score=197.87 Aligned_cols=226 Identities=12% Similarity=0.027 Sum_probs=144.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC-cEEEEEecCCceeEEeee----ecCCceEEEEEec--------CCCeEEEEeCCCC
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDF----ERGGGIGVVEMLF--------RCNILALVGGGPD 150 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~-gv~vw~~~~~~~~~~~~~----~~~~~v~~v~~~~--------~~~~~~~~sg~~~ 150 (321)
+...+....+.+++++||+|+.| +|+|||+++........+ .|.+.|..+++++ ++..+++++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s---- 163 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG---- 163 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE----
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE----
Confidence 44456666777888999999875 599999998865433222 1778899999986 567788777
Q ss_pred CCCCCCcEEEEeCCCCcEE-EEEeeCCceeEEEEeCCe---EEEEE-CCEEEEEEcCCcEEEEEEe--------------
Q 020784 151 PQYPLNKVMIWDDHQSRCI-GELSFRSEVRSVKLRRDR---IIVVL-EQKIFVYNFADLKLLHQIE-------------- 211 (321)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~-~~~~~~~~v~~v~~~~~~---~~~~~-~~~I~iwd~~~~~~~~~l~-------------- 211 (321)
.|++|||||+.++..+ ..+.++..|.+++|+++. ++++. +++|++||+++++....+.
T Consensus 164 ---~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 164 ---DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp ---TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred ---CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 7899999999877654 455677899999999863 44444 5799999998776544432
Q ss_pred -----------ccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEECC-----------
Q 020784 212 -----------TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQ----------- 268 (321)
Q Consensus 212 -----------~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafsp----------- 268 (321)
++...+..+.++ .+|+..++ +++.|+.+++||+.... ...+..|...+..+.+.|
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~-~~dg~~l~-s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWI-GSDGSGIL-AMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp SGGGC------CCSSSCSEEEEE-TTTTCEEE-EECTTSEEEEEEC-------------------CCSCSEEEECSSCCS
T ss_pred cccceeeeecccccccceeeeee-cCCCCEEE-EEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcc
Confidence 222233344443 24567777 58999999999987654 335555555554444433
Q ss_pred ---------CCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCc-ceeEEEeecCceEEEee
Q 020784 269 ---------DGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSI-SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 269 ---------dg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~-~~~~~~s~d~~~la~~~ 319 (321)
++.++++|+.||+ |+|||+.+++++..+...+. ...++|++||++||+++
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~-V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGL-IQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTE-EEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred eeEEEccCCCCEEEEEECCCCE-EEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 3457788999999 99999999998877654333 33458899999999985
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.93 E-value=4e-23 Score=200.30 Aligned_cols=228 Identities=16% Similarity=0.217 Sum_probs=175.0
Q ss_pred CCCCCC-eEEEEEcC--CCCEEEEEcCCc-EEEEEecCC------ceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCC
Q 020784 82 SSPPPT-LLHISFNQ--DHGCFAAGTDHG-FRIYNCDPF------REIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPD 150 (321)
Q Consensus 82 ~~~~~~-V~~v~fs~--dg~~lasg~~~g-v~vw~~~~~------~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~ 150 (321)
..|... |++++|+| ||++||+|+.++ |+|||+.++ .......+. |.+.+..++++++++.+++++.+.+
T Consensus 60 ~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 139 (615)
T 1pgu_A 60 TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD 139 (615)
T ss_dssp CTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS
T ss_pred ecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC
Confidence 567788 99999999 999999999865 889999755 222222222 6788999999999999988884321
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEeeC-CceeEEEEeCCe---EEEEE-CCEEEEEEcCCcEEEEEEeccCC---CCceEEE
Q 020784 151 PQYPLNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRDR---IIVVL-EQKIFVYNFADLKLLHQIETIAN---PKGLCAV 222 (321)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~~---~~~~~-~~~I~iwd~~~~~~~~~l~~~~~---~~~~~~~ 222 (321)
..+.|++|| .++.+..+..+ ..|.++.|+++. ++++. ++.|++||+.+++.+.++..|.. .+..+++
T Consensus 140 ---~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 214 (615)
T 1pgu_A 140 ---NFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF 214 (615)
T ss_dssp ---CSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE
T ss_pred ---CccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEE
Confidence 126788888 55666666544 479999999873 55554 47999999999999999998876 5555555
Q ss_pred eeCCC-ceEEEeecCCCCcEEEEeeCCcc-eEEe-e---ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEE
Q 020784 223 SQGVG-SLVLVCPGLQKGQVRVEHYASKR-TKFI-M---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (321)
Q Consensus 223 s~~~d-~~~la~sGs~dg~V~i~d~~~~~-~~~l-~---~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~ 296 (321)
++ + +.+++ +|+.||.|++||+.++. +..+ . +|...|++++|+ ++.+|++++.||+ |+|||+++++++.+
T Consensus 215 ~~--~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~-i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 215 SP--DSGEFVI-TVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADAT-IRVWDVTTSKCVQK 289 (615)
T ss_dssp CS--TTCCEEE-EEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSE-EEEEETTTTEEEEE
T ss_pred CC--CCCCEEE-EEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCc-EEEEECCCCcEEEE
Confidence 54 5 57777 48899999999988765 4566 5 899999999999 9999999999999 99999999999999
Q ss_pred EeCCC---cceeE-EEeecCceEEEee
Q 020784 297 ECCPS---ISAQS-GLWLSSAWLRVLR 319 (321)
Q Consensus 297 ~~~g~---~~~~~-~~s~d~~~la~~~ 319 (321)
+.... ..... ....++.+|+++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ 316 (615)
T 1pgu_A 290 WTLDKQQLGNQQVGVVATGNGRIISLS 316 (615)
T ss_dssp EECCTTCGGGCEEEEEEEETTEEEEEE
T ss_pred EcCCCCcccCceeEEEeCCCCeEEEEE
Confidence 87541 12222 2234788877653
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=7.7e-24 Score=198.63 Aligned_cols=225 Identities=11% Similarity=0.086 Sum_probs=168.5
Q ss_pred CCCCCCeEEEEEcCC-CCEEEEEcCCc-EEEEEecC----------CceeEEeeeecCCceEEEEEecCCC-eEEEEeCC
Q 020784 82 SSPPPTLLHISFNQD-HGCFAAGTDHG-FRIYNCDP----------FREIFRRDFERGGGIGVVEMLFRCN-ILALVGGG 148 (321)
Q Consensus 82 ~~~~~~V~~v~fs~d-g~~lasg~~~g-v~vw~~~~----------~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~sg~ 148 (321)
..|.+.|++++|+|+ +.+||+|+.+| |+||++.+ ......... |.+.+..++|++++. .+++++
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~-- 201 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-HQKEGYGLSWNPNLNGYLLSAS-- 201 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-CSSCCCCEEECTTSTTEEEEEC--
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-CCCCeEEEEeCCCCCCeEEEEe--
Confidence 467789999999997 78999998865 88999976 344444443 678899999998887 666665
Q ss_pred CCCCCCCCcEEEEeCCCCc----E---EEEE-eeCCceeEEEEeC---CeEEEEE-CCEEEEEEcCCc---EEEEEEecc
Q 020784 149 PDPQYPLNKVMIWDDHQSR----C---IGEL-SFRSEVRSVKLRR---DRIIVVL-EQKIFVYNFADL---KLLHQIETI 213 (321)
Q Consensus 149 ~~~~~~d~~v~iWD~~~~~----~---~~~~-~~~~~v~~v~~~~---~~~~~~~-~~~I~iwd~~~~---~~~~~l~~~ 213 (321)
.|++|++||+..+. . ...+ .+...|.+++|++ ..++++. ++.|++||++++ +.+..+..|
T Consensus 202 -----~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 202 -----DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp -----TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred -----CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 67999999998732 1 2233 3345799999986 2455554 579999999876 567777777
Q ss_pred CCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCC--cceEEeeccccceeEEEECCCCC-EEEEEeCCCcEEEEEEcCC
Q 020784 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~--~~~~~l~~H~~~V~~vafspdg~-~las~S~Dgt~IrIWd~~t 290 (321)
...+..+++++++. .+++ +|+.||.|++||+.. ..+..+.+|...|++|+|+|++. +||+++.||+ |+|||+.+
T Consensus 277 ~~~v~~i~~~p~~~-~~l~-tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~~ 353 (430)
T 2xyi_A 277 TAEVNCLSFNPYSE-FILA-TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSK 353 (430)
T ss_dssp SSCEEEEEECSSCT-TEEE-EEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGGG
T ss_pred CCCeEEEEeCCCCC-CEEE-EEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCCC
Confidence 76666666665432 2455 589999999999986 34778999999999999999985 7999999999 99999987
Q ss_pred --------------CcEEEEEeCCCcce--eEEEeecCc-eEEEe
Q 020784 291 --------------GTLLQEECCPSISA--QSGLWLSSA-WLRVL 318 (321)
Q Consensus 291 --------------g~~i~~~~~g~~~~--~~~~s~d~~-~la~~ 318 (321)
.+++..+ .+|... .+++++++. +|+.+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIH-GGHTAKISDFSWNPNEPWIICSV 397 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEEC-CCCSSCEEEEEECSSSTTEEEEE
T ss_pred CccccCccccccCCcceEEEc-CCCCCCceEEEECCCCCCEEEEE
Confidence 3566655 455543 446677777 45443
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=9.1e-24 Score=201.69 Aligned_cols=218 Identities=8% Similarity=0.038 Sum_probs=163.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCC-----ceEEEEEecCCCeEEEEeCCCCCCCCCC
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGG-----GIGVVEMLFRCNILALVGGGPDPQYPLN 156 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~~~~~sg~~~~~~~d~ 156 (321)
.|...|++|+|||||++||+++.+| |+||+.+. ...... |.. .+..++|+++++.+++++ .||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~--~~~~~~~~sv~svafSPDG~~LAsgs-------~DG 151 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD--SKGNLSSRTYHCFEWNPIESSIVVGN-------EDG 151 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC--CSSCSTTTCEEEEEECSSSSCEEEEE-------TTS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc--CCCccccccEEEEEEcCCCCEEEEEc-------CCC
Confidence 4467899999999999999999866 88999544 222222 232 599999999999999998 789
Q ss_pred cEEEEeCCCCc-------EEEEEeeC-----CceeEEEEeCCeEEEEE-CCEEEEEEcCCcE---EEEEEe-ccCCCCce
Q 020784 157 KVMIWDDHQSR-------CIGELSFR-----SEVRSVKLRRDRIIVVL-EQKIFVYNFADLK---LLHQIE-TIANPKGL 219 (321)
Q Consensus 157 ~v~iWD~~~~~-------~~~~~~~~-----~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~---~~~~l~-~~~~~~~~ 219 (321)
+|+|||++++. .+.++..+ ..|.+++|+++.+++++ |++|++||+.+.+ ..+++. .|...+..
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 99999999875 35565432 37999999999954444 5699999998766 345674 56667777
Q ss_pred EEEeeCCCceEEEeecCCCCcEEEEeeCCcceEEee-ccccceeEEEE--CCCCCEEEEEeCCCcEEEEEEcCC------
Q 020784 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFAL--TQDGQLLATSSTKGTLVRIFNTLD------ 290 (321)
Q Consensus 220 ~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~-~H~~~V~~vaf--spdg~~las~S~Dgt~IrIWd~~t------ 290 (321)
++|+ + ..+|+ ++ +|+|++|+..++....+. +|.+.|+.|+| +||+..|+++++||+ |||.+..
T Consensus 232 vaFs--g--~~LAS-a~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~--klw~~d~~~~spd 303 (588)
T 2j04_A 232 LKIV--D--YKVVL-TC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY--KVLLEDELHVTAD 303 (588)
T ss_dssp EEEE--T--TEEEE-EC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE--EEEESSSEEEECC
T ss_pred EEEE--C--CEEEE-Ee-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC--EEEeeccEEECCC
Confidence 8887 2 56664 44 589999999888775555 99999999999 999999999999987 8888631
Q ss_pred -----------------CcEEEEEeCCCc-ceeEEEeecCceEEEeec
Q 020784 291 -----------------GTLLQEECCPSI-SAQSGLWLSSAWLRVLRT 320 (321)
Q Consensus 291 -----------------g~~i~~~~~g~~-~~~~~~s~d~~~la~~~~ 320 (321)
|..+..++ +.. ...+++++||+.||++..
T Consensus 304 ~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 304 NIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp CSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECTTSSEEEEEEE
T ss_pred ceEEEEcCCEEEEEECCCCceeeec-cceEEEEEEECCCCCEEEEEEe
Confidence 11122221 111 223588999999998764
No 109
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.5e-23 Score=195.06 Aligned_cols=223 Identities=9% Similarity=0.027 Sum_probs=167.3
Q ss_pred CCCCCeEEEEEcCCCCEE-EEEcCC-cEEEEEec--CCceeEEeee-ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 83 SPPPTLLHISFNQDHGCF-AAGTDH-GFRIYNCD--PFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~l-asg~~~-gv~vw~~~--~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
.|.+.|++++|+|||++| ++|+.+ .|+|||+. +++....... .|...+..++++++++.+++++ .++.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-------~~g~ 172 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIAD-------KFGD 172 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-------TTSE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEe-------CCCc
Confidence 456689999999999996 888765 48899998 6665544432 1467899999999999998887 5799
Q ss_pred EEEEeCCCCcEEE----EEe-eCCceeEEEEeCC---e--EEEEE-CCEEEEEEcCCcEEEEEE-eccCCCCceEEEeeC
Q 020784 158 VMIWDDHQSRCIG----ELS-FRSEVRSVKLRRD---R--IIVVL-EQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQG 225 (321)
Q Consensus 158 v~iWD~~~~~~~~----~~~-~~~~v~~v~~~~~---~--~~~~~-~~~I~iwd~~~~~~~~~l-~~~~~~~~~~~~s~~ 225 (321)
|++||+.++.... .+. +...|.+++|+++ . ++++. ++.|++||+.+++.+..+ .+|...+..++|+
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-- 250 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-- 250 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--
Confidence 9999998776442 333 4458999999987 3 44444 469999999988887774 4666666666666
Q ss_pred CCceEEEeecCCCCcEEEEeeCCcc-eEEeec-------------------------cccceeEEEECCCCCEEEEEe-C
Q 020784 226 VGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA-------------------------HDSRIACFALTQDGQLLATSS-T 278 (321)
Q Consensus 226 ~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~-------------------------H~~~V~~vafspdg~~las~S-~ 278 (321)
++.+|+ +|+.||.|++||+.++. +..+.. +...|.+|+|+|++++|++++ .
T Consensus 251 -d~~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~ 328 (450)
T 2vdu_B 251 -KDYLLL-SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA 328 (450)
T ss_dssp -STTEEE-EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT
T ss_pred -CCCEEE-EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC
Confidence 557777 58999999999998765 445553 235799999999999999999 7
Q ss_pred CCcEEEEEEc--CCC---cEEEEEeCCCcceeEEEeecCceEEE
Q 020784 279 KGTLVRIFNT--LDG---TLLQEECCPSISAQSGLWLSSAWLRV 317 (321)
Q Consensus 279 Dgt~IrIWd~--~tg---~~i~~~~~g~~~~~~~~s~d~~~la~ 317 (321)
|++ |+||++ .++ +++.++........+.+++++.++++
T Consensus 329 d~~-i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 329 TKC-IIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTL 371 (450)
T ss_dssp CSE-EEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEE
T ss_pred CCe-EEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEE
Confidence 888 999999 666 67777765433333455554444544
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.7e-24 Score=195.49 Aligned_cols=210 Identities=11% Similarity=0.032 Sum_probs=151.3
Q ss_pred EEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC------
Q 020784 92 SFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH------ 164 (321)
Q Consensus 92 ~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~------ 164 (321)
.+..|+.+|++|+.|+ |+|||+.+++.+..... +.+..+.+++. +++++ .|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~---~~v~~~~~~~~---~~s~s-------~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITT---PNPRTGGEHPA---IISRG-------PCNRLLLLYPGNQITIL 109 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEEE---ECCCTTCCCCS---EEEEC-------STTEEEEEETTTEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEec---CCceeeeeCCc---eEEec-------CCCeEEEEEccCceEEe
Confidence 4456888999999866 88999998877655442 33444444433 44444 57999999654
Q ss_pred ---CCcEEEEEee--CCceeEEEEeC--C--eEEEEE-CCEEEEEEcCCcEEEEEEecc-CCCCceEEEeeCCCceEEEe
Q 020784 165 ---QSRCIGELSF--RSEVRSVKLRR--D--RIIVVL-EQKIFVYNFADLKLLHQIETI-ANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 165 ---~~~~~~~~~~--~~~v~~v~~~~--~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~-~~~~~~~~~s~~~d~~~la~ 233 (321)
+++.+..+.. ...|.++++++ + .++.++ +++|++||+++++.+..+..+ ...+..+++ ++++.++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~--~pdg~~la- 186 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVL--HKDSLLLA- 186 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEE--CTTSCEEE-
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEE--CCCCCEEE-
Confidence 5555555543 35799999988 4 345454 579999999999887666443 334445555 45668888
Q ss_pred ecCCCCcEEEEeeCCcc-e-EEeec-cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC--CC-cc---e
Q 020784 234 PGLQKGQVRVEHYASKR-T-KFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC--PS-IS---A 304 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~-~-~~l~~-H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~--g~-~~---~ 304 (321)
+|+.||.|++||+.++. + ..+.. |.+.|++|+|+|+|.+||+++ |++ |+|||++++++++++.. .+ .. .
T Consensus 187 sg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 187 LYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQT-VVCFDLRKDVGTLAYPTYTIPEFKTGTV 264 (343)
T ss_dssp EECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSB-EEEEETTSSTTCBSSCCCBC-----CCE
T ss_pred EEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCe-EEEEEcCCCCcceeecccccccccccce
Confidence 59999999999998766 3 57888 999999999999999999999 558 99999999987654431 01 11 2
Q ss_pred eEEEeecCceEEEee
Q 020784 305 QSGLWLSSAWLRVLR 319 (321)
Q Consensus 305 ~~~~s~d~~~la~~~ 319 (321)
.++++++|++|+++.
T Consensus 265 ~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYS 279 (343)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEec
Confidence 368889999999854
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=2e-22 Score=187.82 Aligned_cols=226 Identities=12% Similarity=0.099 Sum_probs=179.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iW 161 (321)
.|...|.+++|+++|+++++++. +.+++||+++.+....... |...+..+++.++++.+++++. .+++|++|
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~------~~~~i~~~ 239 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNW------ISEDISVI 239 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEET------TTTEEEEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEec------CCCcEEEE
Confidence 56679999999999999999987 4588999998877655543 5678899999999988866653 36899999
Q ss_pred eCCCCcEEEEEeeCCceeEEEEeCC--eEEEEE---------CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceE
Q 020784 162 DDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL---------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 162 D~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~---------~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
|+++++.+..+.....+.+++|+++ .++++. ++.|++||+.+++.+..+.... . ...+..++++..
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~-~--~~~~~~~~~g~~ 316 (433)
T 3bws_A 240 DRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG-N--KRHIVSGNTENK 316 (433)
T ss_dssp ETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE-C--EEEEEECSSTTE
T ss_pred ECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC-C--cceEEECCCCCE
Confidence 9999999888888788999999876 455554 4599999999998877764332 2 333444555554
Q ss_pred EEeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeC---------------CCcEEEEEEcCCCcEEE
Q 020784 231 LVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST---------------KGTLVRIFNTLDGTLLQ 295 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~---------------Dgt~IrIWd~~tg~~i~ 295 (321)
++++++.+|.|++||..++.......|...+.+++|+|+|++|++++. ||. |++||+.+++++.
T Consensus 317 l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~~~~~ 395 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK-VYVIDTTTDTVKE 395 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE-EEEEETTTTEEEE
T ss_pred EEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE-EEEEECCCCcEEE
Confidence 544688999999999987765544458888999999999999888876 468 9999999999999
Q ss_pred EEeCCCcceeEEEeecCceEEEee
Q 020784 296 EECCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 296 ~~~~g~~~~~~~~s~d~~~la~~~ 319 (321)
.+..+.....+.+++||++|+++.
T Consensus 396 ~~~~~~~~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 396 FWEAGNQPTGLDVSPDNRYLVISD 419 (433)
T ss_dssp EEECSSSEEEEEECTTSCEEEEEE
T ss_pred EecCCCCCceEEEcCCCCEEEEEE
Confidence 997665556678899999998763
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=1.9e-23 Score=192.05 Aligned_cols=203 Identities=11% Similarity=0.114 Sum_probs=152.7
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCC---CeEEEEeCCCCCCCCCCc
Q 020784 83 SPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRC---NILALVGGGPDPQYPLNK 157 (321)
Q Consensus 83 ~~~~~V~~v~fs~-dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~---~~~~~~sg~~~~~~~d~~ 157 (321)
.|...|++++|+| ++.+|++|+.++ +++||+.+.+...... +...+..+.+.+.. ..+++++ .++.
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 167 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGT-------RGPK 167 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEE-------SSSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEc-------CCCe
Confidence 4788999999999 778999988755 8899999988766665 37788888887744 3666666 6799
Q ss_pred EEEEeCCCCcEEEEEee-CCceeEEEEeCCe---EEEEE-CCEEEEEEcCCcE-EEEEE---------------eccCCC
Q 020784 158 VMIWDDHQSRCIGELSF-RSEVRSVKLRRDR---IIVVL-EQKIFVYNFADLK-LLHQI---------------ETIANP 216 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~~-~~~v~~v~~~~~~---~~~~~-~~~I~iwd~~~~~-~~~~l---------------~~~~~~ 216 (321)
|++||+++++.+..+.. ...|.+++|+++. ++++. ++.|++||+++++ .+..+ ..|..
T Consensus 168 v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 246 (408)
T 4a11_B 168 VQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG- 246 (408)
T ss_dssp EEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS-
T ss_pred EEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC-
Confidence 99999999988877764 4589999999864 44454 5799999997654 44444 22333
Q ss_pred CceEEEeeCCCceEEEeecCCCCcEEEEeeCCc-----------------------------------------------
Q 020784 217 KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK----------------------------------------------- 249 (321)
Q Consensus 217 ~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~----------------------------------------------- 249 (321)
.+.++...+++.+++ +|+.||.|++||+...
T Consensus 247 -~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 247 -KVNGLCFTSDGLHLL-TVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp -CEEEEEECTTSSEEE-EEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred -ceeEEEEcCCCCEEE-EecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 344555555668887 4889999999997542
Q ss_pred -ceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 250 -RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 250 -~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
.+..+.+|...|++++|+|+|++||+|+.||. |+|||+.+++.+....
T Consensus 325 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCN-ILAWVPSLYEPVPDDD 373 (408)
T ss_dssp CEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEEECC--------
T ss_pred cceeeeccCCCeEEEEEEcCCCCEEEEECCCCe-EEEEeCCCCCccCCCC
Confidence 24467789999999999999999999999999 9999999999876554
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=1.7e-23 Score=196.53 Aligned_cols=225 Identities=13% Similarity=0.102 Sum_probs=160.6
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcE
Q 020784 82 SSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 82 ~~~~~~V~~v~fs~-dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v 158 (321)
..|.+.|++|+|+| |+.+|++|+.|+ |+|||+............ +...+..++++++++.+++++ .|+.|
T Consensus 161 ~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-------~dg~i 233 (435)
T 4e54_B 161 IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD-------NVGNV 233 (435)
T ss_dssp CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC-------SSSBE
T ss_pred cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe-------CCCcE
Confidence 46888999999998 789999998765 899999876543333220 123456778888888888776 67999
Q ss_pred EEEeCCCCcEEEEEee-CCceeEEEEeCC---eEEEEE-CCEEEEEEcCCcEEEEEE---eccCCCCceEEEeeCCCceE
Q 020784 159 MIWDDHQSRCIGELSF-RSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQI---ETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 159 ~iWD~~~~~~~~~~~~-~~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l---~~~~~~~~~~~~s~~~d~~~ 230 (321)
++||++... +..+.. ...|.+++|+++ .++.++ ++.|++||+++.+....+ ..|... +.++.+++++.+
T Consensus 234 ~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~--v~~~~~spdg~~ 310 (435)
T 4e54_B 234 ILLNMDGKE-LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHP--VNAACFSPDGAR 310 (435)
T ss_dssp EEEESSSCB-CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSC--EEECCBCTTSSE
T ss_pred eeeccCcce-eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccc--ccceeECCCCCe
Confidence 999987543 344443 458999999864 344444 579999999876554443 234444 445555567788
Q ss_pred EEeecCCCCcEEEEeeCCcc-eEEeecccc------ceeEEEECCCCCEEEEEe------------CCCcEEEEEEcCCC
Q 020784 231 LVCPGLQKGQVRVEHYASKR-TKFIMAHDS------RIACFALTQDGQLLATSS------------TKGTLVRIFNTLDG 291 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~~~~-~~~l~~H~~------~V~~vafspdg~~las~S------------~Dgt~IrIWd~~tg 291 (321)
|+ +|+.||.|+|||..... ...+..|.. .+..++|+|++.++++++ .+++ |+|||+.+|
T Consensus 311 l~-s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-i~iwd~~~g 388 (435)
T 4e54_B 311 LL-TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRT-IDVFDGNSG 388 (435)
T ss_dssp EE-EEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCC-EEEECSSSC
T ss_pred eE-EEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCE-EEEEECCCC
Confidence 88 59999999999988654 455655543 234556777777776664 2356 999999999
Q ss_pred cEEEEEeCCCcceeE---EEeecCceEEEe
Q 020784 292 TLLQEECCPSISAQS---GLWLSSAWLRVL 318 (321)
Q Consensus 292 ~~i~~~~~g~~~~~~---~~s~d~~~la~~ 318 (321)
+++.++..++...+. .|+++|++||.+
T Consensus 389 ~~~~~l~~~~~~~v~s~~~fspdg~~lasg 418 (435)
T 4e54_B 389 KMMCQLYDPESSGISSLNEFNPMGDTLASA 418 (435)
T ss_dssp CEEEEECCSSCCCCCCEEEECTTSSCEEEE
T ss_pred cEEEEEeCCCCCcEEEEEEECCCCCEEEEE
Confidence 999998766664432 578999999865
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=8.4e-23 Score=189.52 Aligned_cols=198 Identities=14% Similarity=0.045 Sum_probs=135.4
Q ss_pred cCCCCCCeEEEEEcC--------CCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEEecCCC-eEEEEeCCCC
Q 020784 81 SSSPPPTLLHISFNQ--------DHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPD 150 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~--------dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~sg~~~ 150 (321)
..+|.+.|++|+|+| ||++||+|++|+ |+|||+.+.+....... |...+..+++++++. .+++++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~---- 206 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLIVGE---- 206 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEEEEE----
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEEecC----
Confidence 357889999999998 899999998855 89999988776544433 678899999998764 566665
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEe--------------------------eCCceeEEEEe-C--CeEEEEE-CCEEEEEE
Q 020784 151 PQYPLNKVMIWDDHQSRCIGELS--------------------------FRSEVRSVKLR-R--DRIIVVL-EQKIFVYN 200 (321)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~~~~--------------------------~~~~v~~v~~~-~--~~~~~~~-~~~I~iwd 200 (321)
.|++|++||+++++...+.. +...+.++.|. + ..++.+. ++++++||
T Consensus 207 ---~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 207 ---RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp ---TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred ---CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 67999999998876543321 12356777776 3 3444444 56999999
Q ss_pred cCCcEEEEEEeccCCCC------------------ceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeeccccce
Q 020784 201 FADLKLLHQIETIANPK------------------GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRI 261 (321)
Q Consensus 201 ~~~~~~~~~l~~~~~~~------------------~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V 261 (321)
+..++....+..+.... ..+.+++..++.+++ +|+.||.|++||...+. ...+.+|...|
T Consensus 284 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V 362 (393)
T 4gq1_A 284 LFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT-AHSQHGLIQLINTYEKDSNSIPIQLGMPI 362 (393)
T ss_dssp C-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE-EETTTTEEEEEETTCTTCCEEEEECSSCE
T ss_pred CccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE-EECCCCEEEEEECCCCcEEEEecCCCCcE
Confidence 98776666554332211 123445555555666 69999999999988755 56788899999
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 020784 262 ACFALTQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 262 ~~vafspdg~~las~S~Dgt~IrIWd~~ 289 (321)
++|+|||||++||++++|| +.+|.+.
T Consensus 363 ~svafspdG~~LA~as~~G--v~lvrL~ 388 (393)
T 4gq1_A 363 VDFCWHQDGSHLAIATEGS--VLLTRLM 388 (393)
T ss_dssp EEEEECTTSSEEEEEESSE--EEEEEEG
T ss_pred EEEEEcCCCCEEEEEeCCC--eEEEEEe
Confidence 9999999999999999665 5577653
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=5.4e-23 Score=186.21 Aligned_cols=198 Identities=9% Similarity=0.045 Sum_probs=148.3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeeeecCCceEEEEE--ecCCCeEEEEeCCCCCCCCCCc
Q 020784 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEM--LFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~--~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
...|...|++++|+|+|++|++|+.++ |+|||+.+.+...... |.+.+..+++ .++++.+++++ .|+.
T Consensus 82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~-------~dg~ 152 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ--HDAPVKTIHWIKAPNYSCVMTGS-------WDKT 152 (368)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEEEECSSCEEEEEEE-------TTSE
T ss_pred eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc--ccCceEEEEEEeCCCCCEEEEcc-------CCCc
Confidence 345788999999999999999999866 8899999887665444 6889999999 66677777777 6799
Q ss_pred EEEEeCCCCcEEEEEeeCCceeEEEEeCC------------------------------------------------eEE
Q 020784 158 VMIWDDHQSRCIGELSFRSEVRSVKLRRD------------------------------------------------RII 189 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~~~~~v~~v~~~~~------------------------------------------------~~~ 189 (321)
|++||+++++.+..+..+..+.++.+... .++
T Consensus 153 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 153 LKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp EEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE
Confidence 99999998887766665544433333221 144
Q ss_pred EEE-CCEEEEEEcCCc---EEEEEEeccCCCC----------ceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEe
Q 020784 190 VVL-EQKIFVYNFADL---KLLHQIETIANPK----------GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFI 254 (321)
Q Consensus 190 ~~~-~~~I~iwd~~~~---~~~~~l~~~~~~~----------~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l 254 (321)
++. ++.|++||++.. +.+..+..|.... .+.++..++++.+|+ +|+.||.|++||+.++. +..+
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLA-TVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEE-EEETTSCEEEEETTTTEEEEEC
T ss_pred EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEE-EEccCCeEEEEECCCCcEEEEe
Confidence 444 468888888765 4555666654310 244555555667887 48999999999998765 6689
Q ss_pred eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 020784 255 MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 255 ~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~ 289 (321)
.+|...|++++|+|+|++||+||.|+. .+.|++-
T Consensus 312 ~~~~~~v~~~~~s~~g~~l~~~s~d~~-~~~~~~~ 345 (368)
T 3mmy_A 312 EQLDQPISACCFNHNGNIFAYASSYDW-SKGHEFY 345 (368)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEECCCS-TTCGGGC
T ss_pred cCCCCCceEEEECCCCCeEEEEecccc-ccccccc
Confidence 999999999999999999999999885 5555543
No 116
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=8e-23 Score=208.75 Aligned_cols=201 Identities=11% Similarity=0.102 Sum_probs=138.0
Q ss_pred CCCCCCeEEEEEcCC-CCEEEEEcCCcEEEEEecCCceeEEeeee-----------------cCCceEEEEEecCCCeEE
Q 020784 82 SSPPPTLLHISFNQD-HGCFAAGTDHGFRIYNCDPFREIFRRDFE-----------------RGGGIGVVEMLFRCNILA 143 (321)
Q Consensus 82 ~~~~~~V~~v~fs~d-g~~lasg~~~gv~vw~~~~~~~~~~~~~~-----------------~~~~v~~v~~~~~~~~~~ 143 (321)
..|.+.|++++|+|+ +.+|++|+.++..|||+.+.+........ |...|..++|++++..++
T Consensus 148 ~~h~~~V~sl~~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 148 AARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp SSCCCCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred ccCCCCeEEEEEccCCCCEEEEEeCCCcEEEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 567789999999996 47888888876339999988766554430 135699999999999998
Q ss_pred EEeCCCCCCCCCCcEEEEeCCCCcEEEEEee-------------------CCceeEEEEe----CC--eEEEEE-C----
Q 020784 144 LVGGGPDPQYPLNKVMIWDDHQSRCIGELSF-------------------RSEVRSVKLR----RD--RIIVVL-E---- 193 (321)
Q Consensus 144 ~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~-------------------~~~v~~v~~~----~~--~~~~~~-~---- 193 (321)
+++ .|++|++||+++++++....+ ...|.+++|. ++ .++++. .
T Consensus 228 sgs-------~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 228 TIH-------EDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp EEE-------TTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred EEE-------CCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 888 789999999999887653111 2258888884 32 233222 2
Q ss_pred --CEEEEEEc----------------------------------------------------------------------
Q 020784 194 --QKIFVYNF---------------------------------------------------------------------- 201 (321)
Q Consensus 194 --~~I~iwd~---------------------------------------------------------------------- 201 (321)
..+++|++
T Consensus 301 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~ 380 (902)
T 2oaj_A 301 DNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETML 380 (902)
T ss_dssp SCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEE
T ss_pred CCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEE
Confidence 15656652
Q ss_pred -CCcEEEEE-------EeccCCCCceEEE--------------------------------eeCCCceEEEeecCCCCcE
Q 020784 202 -ADLKLLHQ-------IETIANPKGLCAV--------------------------------SQGVGSLVLVCPGLQKGQV 241 (321)
Q Consensus 202 -~~~~~~~~-------l~~~~~~~~~~~~--------------------------------s~~~d~~~la~sGs~dg~V 241 (321)
.++..... +..|...+..+++ ...+++.+|| +|+.||+|
T Consensus 381 ~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~la-Sgs~DgtV 459 (902)
T 2oaj_A 381 YPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFI-TGHSNGSV 459 (902)
T ss_dssp TTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEE-EEETTSEE
T ss_pred CCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEE-EecCCCcE
Confidence 22111000 0000011111122 1235667888 69999999
Q ss_pred EEEeeCCcceE---Ee----e-----ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 020784 242 RVEHYASKRTK---FI----M-----AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 242 ~i~d~~~~~~~---~l----~-----~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg 291 (321)
++||+..+.+. .+ . +|...|++|+|+|||++||+|+.||+ |||||+.++
T Consensus 460 rlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt-V~lwd~~~~ 520 (902)
T 2oaj_A 460 RIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGD-VVLFKYEVN 520 (902)
T ss_dssp EEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC-EEEEEEEEC
T ss_pred EEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcE-EEEEEecCc
Confidence 99998765431 12 1 89999999999999999999999999 999999877
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.91 E-value=2.4e-22 Score=183.89 Aligned_cols=188 Identities=12% Similarity=0.094 Sum_probs=143.5
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 87 ~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
.+..++|.+++++++ +|+. +.|+|||..+++.+....+ ...+..+.+. .+.++++. ++.|++||+.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~--~~~v~~v~~~--~~~~~~~~--------~~~i~i~d~~ 127 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKV--DAPVKDLFLS--REFIVVSY--------GDVISVFKFG 127 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEEC--SSCEEEEEEC--SSEEEEEE--------TTEEEEEESS
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEEC--CCceEEEEEc--CCEEEEEE--------cCEEEEEECC
Confidence 477889999988875 4554 5689999999988776664 6677776664 45555554 5889999999
Q ss_pred CC-cEEEEEeeCCceeEEEEeCCeEEEE---ECCEEEEEEcCCcE----------------EEEEEeccCCCCceEEEee
Q 020784 165 QS-RCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK----------------LLHQIETIANPKGLCAVSQ 224 (321)
Q Consensus 165 ~~-~~~~~~~~~~~v~~v~~~~~~~~~~---~~~~I~iwd~~~~~----------------~~~~l~~~~~~~~~~~~s~ 224 (321)
++ +.+..+.. ....+++.+..++++ .++.|++||+.+++ .++.+..|...+..+++++
T Consensus 128 ~~~~~~~~~~~--~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~ 205 (355)
T 3vu4_A 128 NPWKRITDDIR--FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR 205 (355)
T ss_dssp TTCCBSSCCEE--EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT
T ss_pred CCceeeEEecc--CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC
Confidence 87 55554444 333455666677665 24799999998765 2677888877766666655
Q ss_pred CCCceEEEeecCCCCc-EEEEeeCCcc-eEEee-c-cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCc
Q 020784 225 GVGSLVLVCPGLQKGQ-VRVEHYASKR-TKFIM-A-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (321)
Q Consensus 225 ~~d~~~la~sGs~dg~-V~i~d~~~~~-~~~l~-~-H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~ 292 (321)
++.+|| +|+.||+ |+|||+.++. +.++. + |...|++++|+|+|++||+|+.|++ |+|||++++.
T Consensus 206 --~g~~l~-s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~-v~iw~~~~~~ 273 (355)
T 3vu4_A 206 --KSDMVA-TCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT-LHVFEIFNDQ 273 (355)
T ss_dssp --TSSEEE-EEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE-EEEEESSCCS
T ss_pred --CCCEEE-EEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE-EEEEEccCCC
Confidence 568888 5999998 9999998765 66787 5 9999999999999999999999999 9999998764
No 118
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=1.2e-22 Score=188.37 Aligned_cols=220 Identities=10% Similarity=0.037 Sum_probs=165.1
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCcee----EEeeeecCCceEEEEEec-CCCeEEEEeCCCCCCCCCCcEE
Q 020784 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREI----FRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 87 ~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~~~----~~~~~~~~~~v~~v~~~~-~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
...+++++|+...++ +|+. +.|+||++...+.. ..... |.+.|..+++++ +++.+++++ .|++|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~s-------~dg~v~ 107 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCG-HTAPVLDIAWCPHNDNVIASGS-------EDCTVM 107 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCC-CSSCEEEEEECTTCTTEEEEEE-------TTSEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEec-CCCCEEEEEeCCCCCCEEEEEe-------CCCeEE
Confidence 345689999886555 4555 45889998654321 11112 678999999998 888888887 679999
Q ss_pred EEeCCCC-------cEEEEEe-eCCceeEEEEeCCe---EEEEE-CCEEEEEEcCCcEEEEEE--eccCCCCceEEEeeC
Q 020784 160 IWDDHQS-------RCIGELS-FRSEVRSVKLRRDR---IIVVL-EQKIFVYNFADLKLLHQI--ETIANPKGLCAVSQG 225 (321)
Q Consensus 160 iWD~~~~-------~~~~~~~-~~~~v~~v~~~~~~---~~~~~-~~~I~iwd~~~~~~~~~l--~~~~~~~~~~~~s~~ 225 (321)
|||+.++ +.+..+. +...|.+++|+++. ++++. ++.|++||+.+++.+.++ ..|...+..++++
T Consensus 108 vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~-- 185 (402)
T 2aq5_A 108 VWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS-- 185 (402)
T ss_dssp EEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC--
T ss_pred EEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC--
Confidence 9999887 4455665 44589999999863 44554 579999999999999999 5665555555554
Q ss_pred CCceEEEeecCCCCcEEEEeeCCcc-eEEe-eccccc-eeEEEECCCCCEEEEE---eCCCcEEEEEEcCCCcE-EEEEe
Q 020784 226 VGSLVLVCPGLQKGQVRVEHYASKR-TKFI-MAHDSR-IACFALTQDGQLLATS---STKGTLVRIFNTLDGTL-LQEEC 298 (321)
Q Consensus 226 ~d~~~la~sGs~dg~V~i~d~~~~~-~~~l-~~H~~~-V~~vafspdg~~las~---S~Dgt~IrIWd~~tg~~-i~~~~ 298 (321)
+++.+|+ +|+.||.|++||+..+. +..+ .+|.+. +.+++|+|+|.+|++| +.|+. |+|||+++++. +....
T Consensus 186 ~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~~ 263 (402)
T 2aq5_A 186 RDGALIC-TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQE 263 (402)
T ss_dssp TTSSCEE-EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEEE
T ss_pred CCCCEEE-EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEEe
Confidence 4667777 48899999999998765 4566 788876 9999999999999999 78999 99999999764 33333
Q ss_pred CCC--cceeEEEeecCceEEEe
Q 020784 299 CPS--ISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 299 ~g~--~~~~~~~s~d~~~la~~ 318 (321)
..+ ....+.+++++++|+++
T Consensus 264 ~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 264 LDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp CCCCSSCEEEEEETTTTEEEEE
T ss_pred ccCCCceeEEEEcCCCCEEEEE
Confidence 233 34455788999999764
No 119
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.1e-23 Score=192.82 Aligned_cols=194 Identities=8% Similarity=0.017 Sum_probs=142.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCc---eeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~---~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
..|...|++++|+|+|++|++|+.++ |+|||+.+.+ ....... |...+..++++++++.+++++ .|++
T Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-------~d~~ 123 (377)
T 3dwl_C 52 SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNEDKFAVGS-------GARV 123 (377)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCC-CSSCEEEEECCTTSSCCEEEE-------SSSC
T ss_pred ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCCEEEEEe-------cCCe
Confidence 46788999999999999999998755 8999998876 3333222 678899999999999998888 6799
Q ss_pred EEEEeCCCCc---EEEEEe--eCCceeEEEEeCC--eEEEEE-CCEEEEEEcC------------------CcEEEEEEe
Q 020784 158 VMIWDDHQSR---CIGELS--FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFA------------------DLKLLHQIE 211 (321)
Q Consensus 158 v~iWD~~~~~---~~~~~~--~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~------------------~~~~~~~l~ 211 (321)
|++||+++++ ....+. +...|.+++|+++ .+++++ ++.|++||+. .++++..+
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 9999999876 355555 4568999999976 355554 5699999985 35566666
Q ss_pred ccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-----eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEE
Q 020784 212 TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIF 286 (321)
Q Consensus 212 ~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-----~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIW 286 (321)
.|...+..+++ .+++.+|+ +|+.||.|++||+.... +..+.+|...|++++|+|+|++|++|+.|+. + +|
T Consensus 203 ~~~~~v~~~~~--sp~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~-~~ 277 (377)
T 3dwl_C 203 PSGGWVHAVGF--SPSGNALA-YAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP-I-LL 277 (377)
T ss_dssp CCSSSEEEEEE--CTTSSCEE-EEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE-E-EE
T ss_pred cCCceEEEEEE--CCCCCEEE-EEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE-E-EE
Confidence 55555444555 45667787 48999999999998754 4578999999999999999999999986655 5 77
Q ss_pred EcC
Q 020784 287 NTL 289 (321)
Q Consensus 287 d~~ 289 (321)
+..
T Consensus 278 ~~~ 280 (377)
T 3dwl_C 278 QGN 280 (377)
T ss_dssp CCC
T ss_pred EeC
Confidence 665
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.5e-23 Score=198.68 Aligned_cols=213 Identities=10% Similarity=0.018 Sum_probs=155.4
Q ss_pred CCeEEEEEcCCCCEEEEEcCCc-EEEEEecCC-----------------------------ceeEEeeeecCCceEEEEE
Q 020784 86 PTLLHISFNQDHGCFAAGTDHG-FRIYNCDPF-----------------------------REIFRRDFERGGGIGVVEM 135 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~-----------------------------~~~~~~~~~~~~~v~~v~~ 135 (321)
..|.+|+|+|||+++|+++.|+ |+ |.... +......+.|...|..++|
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vaw 93 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKP 93 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEE
Confidence 4788999999999999998865 52 32221 1111111114567999999
Q ss_pred ecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCC-----ceeEEEEeCCe--EEEEE-CCEEEEEEcCCcE--
Q 020784 136 LFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS-----EVRSVKLRRDR--IIVVL-EQKIFVYNFADLK-- 205 (321)
Q Consensus 136 ~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~-----~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~-- 205 (321)
++++..+|+++ .||+|+|||.+. ++..+.++. .|.+++|+++. +++++ +++|++||+.+++
T Consensus 94 SPdG~~LAs~s-------~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~ 164 (588)
T 2j04_A 94 SPIDDWMAVLS-------NNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSEN 164 (588)
T ss_dssp CSSSSCEEEEE-------TTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTT
T ss_pred CCCCCEEEEEe-------CCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 99999999999 789999999654 666666222 49999999864 66666 5799999998774
Q ss_pred -----EEEEEe----ccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcce----EEe-eccccceeEEEECCCCC
Q 020784 206 -----LLHQIE----TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT----KFI-MAHDSRIACFALTQDGQ 271 (321)
Q Consensus 206 -----~~~~l~----~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~----~~l-~~H~~~V~~vafspdg~ 271 (321)
.++++. +|...+..+++++ |+ ++ +++.|+.|++|+...+.. .++ .+|...|.+|+|+ |+
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSP--dg--La-ass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~ 237 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYE--DV--LV-AALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY 237 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEET--TE--EE-EEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT
T ss_pred cccceeeeeeecccccccccEEEEEEcC--Cc--EE-EEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CC
Confidence 467774 3445555566654 55 44 367799999999987653 356 4899999999999 68
Q ss_pred EEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce--eEEE--eecCceEEEee
Q 020784 272 LLATSSTKGTLVRIFNTLDGTLLQEECCPSISA--QSGL--WLSSAWLRVLR 319 (321)
Q Consensus 272 ~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~--~~~~--s~d~~~la~~~ 319 (321)
+||+++ |++ |++||+.+++... +..||... .+.+ ++|++.|++|-
T Consensus 238 ~LASa~-~~t-IkLWd~~~~~~~~-~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 238 KVVLTC-PGY-VHKIDLKNYSISS-LKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp EEEEEC-SSE-EEEEETTTTEEEE-EECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred EEEEEe-CCe-EEEEECCCCeEEE-EEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 999998 688 9999999888743 33366643 4577 88888888763
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=2.1e-22 Score=188.88 Aligned_cols=199 Identities=11% Similarity=0.156 Sum_probs=154.9
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEEcCCc-EEEEEecCCce-------eEEeeeecCCceEEEEEec-CCCeEEEEeCCCCC
Q 020784 82 SSPPPTLLHISFNQDHG-CFAAGTDHG-FRIYNCDPFRE-------IFRRDFERGGGIGVVEMLF-RCNILALVGGGPDP 151 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~-~lasg~~~g-v~vw~~~~~~~-------~~~~~~~~~~~v~~v~~~~-~~~~~~~~sg~~~~ 151 (321)
..|...|++++|+|++. +|++|+.+| |+||++..... ...... |.+.+..+++++ +.+.+++++
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~----- 251 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVA----- 251 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEE-----
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEe-----
Confidence 46788999999999998 999998765 88999987321 112222 677899999988 566777766
Q ss_pred CCCCCcEEEEeCCCC---cEEEEEe-eCCceeEEEEeCCe---EEEEE-CCEEEEEEcCC-cEEEEEEeccCCCCceEEE
Q 020784 152 QYPLNKVMIWDDHQS---RCIGELS-FRSEVRSVKLRRDR---IIVVL-EQKIFVYNFAD-LKLLHQIETIANPKGLCAV 222 (321)
Q Consensus 152 ~~~d~~v~iWD~~~~---~~~~~~~-~~~~v~~v~~~~~~---~~~~~-~~~I~iwd~~~-~~~~~~l~~~~~~~~~~~~ 222 (321)
.|+.|++||++++ +.+..+. +...|.+++|+++. ++++. ++.|++||+++ .+.+..+..|...+..+++
T Consensus 252 --~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 252 --DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp --TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred --CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence 5799999999876 4555554 44689999999753 44444 57999999987 5677888888776666666
Q ss_pred eeCCCceEEEeecCCCCcEEEEeeCC---------------cceEEeeccccceeEEEECCCCC-EEEEEeCCCcEEEEE
Q 020784 223 SQGVGSLVLVCPGLQKGQVRVEHYAS---------------KRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIF 286 (321)
Q Consensus 223 s~~~d~~~la~sGs~dg~V~i~d~~~---------------~~~~~l~~H~~~V~~vafspdg~-~las~S~Dgt~IrIW 286 (321)
++++. .+++ +|+.||.|+|||+.. ..+..+.+|...|++++|+|+++ +||+++.||+ |+||
T Consensus 330 sp~~~-~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~-i~iw 406 (430)
T 2xyi_A 330 SPHNE-TILA-SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI-MQVW 406 (430)
T ss_dssp CSSCT-TEEE-EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSE-EEEE
T ss_pred CCCCC-CEEE-EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCC-EEEe
Confidence 66532 3455 588999999999875 34567889999999999999999 9999999999 9999
Q ss_pred EcCCC
Q 020784 287 NTLDG 291 (321)
Q Consensus 287 d~~tg 291 (321)
++..+
T Consensus 407 ~~~~~ 411 (430)
T 2xyi_A 407 QMAEN 411 (430)
T ss_dssp EECHH
T ss_pred Ecccc
Confidence 99864
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.8e-22 Score=202.57 Aligned_cols=201 Identities=11% Similarity=0.015 Sum_probs=157.2
Q ss_pred CCCCCCeEEEEEcCC--CCEEEEEcCCc-EEEEEecCCceeEEeeee-cCCceEEEEEecC--CCeEEEEeCCCCCCCCC
Q 020784 82 SSPPPTLLHISFNQD--HGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPL 155 (321)
Q Consensus 82 ~~~~~~V~~v~fs~d--g~~lasg~~~g-v~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~~~sg~~~~~~~d 155 (321)
..|.+.|++++|+++ |++|++|+.+| |+|||+.+++......+. |.+.|.+++++++ ++.+++++ .|
T Consensus 50 ~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs-------~d 122 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-------SD 122 (753)
T ss_dssp CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-------TT
T ss_pred cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe-------CC
Confidence 467889999999988 99999999866 889999988632222222 6788999999998 88888887 67
Q ss_pred CcEEEEeCCCCcE--EEEE-eeCCceeEEEEeC---------------CeEEEEE-CCEEEEEEcCCc----EEEEEEec
Q 020784 156 NKVMIWDDHQSRC--IGEL-SFRSEVRSVKLRR---------------DRIIVVL-EQKIFVYNFADL----KLLHQIET 212 (321)
Q Consensus 156 ~~v~iWD~~~~~~--~~~~-~~~~~v~~v~~~~---------------~~~~~~~-~~~I~iwd~~~~----~~~~~l~~ 212 (321)
++|++||++++.. ...+ .+...|.++.|++ ..+++++ ++.|++||++++ ..+..+..
T Consensus 123 g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 123 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC
Confidence 9999999988732 2222 3456899999987 2355555 579999999765 66677777
Q ss_pred cCCCCceEEEeeCCC-ceEEEeecCCCCcEEEEeeCCc------ceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEE
Q 020784 213 IANPKGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYASK------RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (321)
Q Consensus 213 ~~~~~~~~~~s~~~d-~~~la~sGs~dg~V~i~d~~~~------~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrI 285 (321)
|...+..++++++.. +.+++ +|+.||.|++||...+ .......|...|++++|+|+|++|++|+.||. |+|
T Consensus 203 h~~~V~~l~~sp~~~~~~~l~-s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~-I~v 280 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYLA-SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-VTL 280 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEEE-EEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSC-EEC
T ss_pred CCCcEEEEEeccCCCCCCEEE-EEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCE-EEE
Confidence 777666666665410 57777 5999999999999875 23345669999999999999999999999999 999
Q ss_pred EEcCCC
Q 020784 286 FNTLDG 291 (321)
Q Consensus 286 Wd~~tg 291 (321)
||+.++
T Consensus 281 wd~~~~ 286 (753)
T 3jro_A 281 WKENLE 286 (753)
T ss_dssp CBCCSS
T ss_pred EecCCC
Confidence 999853
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=2.2e-21 Score=174.82 Aligned_cols=226 Identities=11% Similarity=0.053 Sum_probs=147.3
Q ss_pred CeEEEEEcCCCC---EEEEEcCCcEEEEEecCC---ceeEEeeeecCCceEEEEE-------------------------
Q 020784 87 TLLHISFNQDHG---CFAAGTDHGFRIYNCDPF---REIFRRDFERGGGIGVVEM------------------------- 135 (321)
Q Consensus 87 ~V~~v~fs~dg~---~lasg~~~gv~vw~~~~~---~~~~~~~~~~~~~v~~v~~------------------------- 135 (321)
.|.++.|-.-|- +++++++.+|++|+.... +..+.+++ |...|..+.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHF-AEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEEC-CSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEec-cCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 455666665554 789999999999999888 67777776 4433433333
Q ss_pred ecC----CCeEEEEeC---------CCC----CCCCCCcEEEEeCC-CCcEEEEEeeCC-ceeEEEEeC-----CeEEEE
Q 020784 136 LFR----CNILALVGG---------GPD----PQYPLNKVMIWDDH-QSRCIGELSFRS-EVRSVKLRR-----DRIIVV 191 (321)
Q Consensus 136 ~~~----~~~~~~~sg---------~~~----~~~~d~~v~iWD~~-~~~~~~~~~~~~-~v~~v~~~~-----~~~~~~ 191 (321)
+++ +..++..+. +.. ..-.|++|++|++. +|+.+..+..+. .+..++|++ ..++.+
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSg 199 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGT 199 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEE
T ss_pred CCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEe
Confidence 333 222222110 000 00137888999984 477766665544 566666665 456665
Q ss_pred E-CCEEEEEEcCCcEEEEEEeccCCC-Cce--EEEeeCCCceEEE-----------eecCCCCcEEEEeeCCcce-EEe-
Q 020784 192 L-EQKIFVYNFADLKLLHQIETIANP-KGL--CAVSQGVGSLVLV-----------CPGLQKGQVRVEHYASKRT-KFI- 254 (321)
Q Consensus 192 ~-~~~I~iwd~~~~~~~~~l~~~~~~-~~~--~~~s~~~d~~~la-----------~sGs~dg~V~i~d~~~~~~-~~l- 254 (321)
+ |++|||||+.++++++++.+|... ..+ ++|+++ +.+++ .+|+.|++|++||..++.. .++
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpd--G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~ 277 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEM--GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML 277 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEET--TEEEEEEC------------CCEEEEEEETTTTEEEEEEE
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCC--CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE
Confidence 5 579999999999999999865432 233 356664 46552 3689999999999887763 333
Q ss_pred ----eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcc--e-eEEEeecCceEEEee
Q 020784 255 ----MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSIS--A-QSGLWLSSAWLRVLR 319 (321)
Q Consensus 255 ----~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~--~-~~~~s~d~~~la~~~ 319 (321)
.+|...+.+..++ +.++|+||.|++ |||||+.+|++++++. +|.. . .+.|++||++|+.+.
T Consensus 278 ~~~p~Gh~~~~lsg~~s--g~~lASgS~DgT-IkIWDl~tGk~l~tL~-gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 278 YCLPPGQAGRFLEGDVK--DHCAAAILTSGT-IAIWDLLLGQCTALLP-PVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp ECCCTTCCCCEEEEEEE--TTEEEEEETTSC-EEEEETTTCSEEEEEC-CC--CCCCEEEECSSSSEEEEEC
T ss_pred eeccCCCcceeEccccC--CCEEEEEcCCCc-EEEEECCCCcEEEEec-CCCCCeEEEEEECCCCCEEEEEE
Confidence 4777766555554 889999999999 9999999999999995 4432 2 358999999998764
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=1.7e-20 Score=172.49 Aligned_cols=209 Identities=11% Similarity=0.069 Sum_probs=163.9
Q ss_pred CEEEEEcCC-cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCC
Q 020784 98 GCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS 176 (321)
Q Consensus 98 ~~lasg~~~-gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~ 176 (321)
.+|++++.+ .|++||+++++....... ...+..++++++++.++++++ .+++|++||..+++.+..+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~------~d~~i~v~d~~~~~~~~~~~~~~ 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPV--GSNPMGAVISPDGTKVYVANA------HSNDVSIIDTATNNVIATVPAGS 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEEG------GGTEEEEEETTTTEEEEEEECSS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeec--CCCcceEEECCCCCEEEEECC------CCCeEEEEECCCCeEEEEEECCC
Confidence 456777764 588999999887666553 456888999999987755542 46899999999999999998888
Q ss_pred ceeEEEEeCC--eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceE
Q 020784 177 EVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK 252 (321)
Q Consensus 177 ~v~~v~~~~~--~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~ 252 (321)
.+.+++|+++ .++++. ++.|++||+.+++.+..+..+.. ..++...+++..++++++.++.|++||..++...
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS---PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS---EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC---cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 9999999975 355554 37999999999999888876543 3444555566766546888999999998876644
Q ss_pred -EeeccccceeEEEECCCCCEE-EEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEEee
Q 020784 253 -FIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 253 -~l~~H~~~V~~vafspdg~~l-as~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~~~ 319 (321)
.+..| ..+.+++|+|+|++| ++++.|++ |++||+++++++..+........+.+++++++|+++.
T Consensus 152 ~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 152 NTVSVG-RSPKGIAVTPDGTKVYVANFDSMS-ISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp EEEECC-SSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEE
T ss_pred EEEecC-CCcceEEECCCCCEEEEEeCCCCE-EEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEe
Confidence 55544 567999999999877 67788888 9999999999998887655555668889999988764
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=6.3e-21 Score=177.67 Aligned_cols=223 Identities=6% Similarity=-0.013 Sum_probs=172.7
Q ss_pred CCeEEEEEcCCCCEEEEEcCCc-EEEEEecCCceeEEeee----ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 86 PTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDF----ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~g-v~vw~~~~~~~~~~~~~----~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
..+.+++|+|++.++++++.++ |++||+.+++....... .|.+.+..+++.+++..+++.+ .|+.|++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-------~d~~v~~ 195 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM-------QANAVHV 195 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG-------GGTEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC-------CCCEEEE
Confidence 4567999999888888887754 99999998876543221 1456788888877777777666 5799999
Q ss_pred EeCCCCcEEEEEeeC-CceeEEEEeCC--eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeec
Q 020784 161 WDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~--~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sG 235 (321)
||+++++.+..+..+ ..+.+++|+++ .++++. ++.|++||+++++.+..+..+.. ..++..++++..+++.+
T Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 196 FDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL---PRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp EETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE---EEEEEECTTSSEEEEEE
T ss_pred EECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC---ceEEEEcCCCCEEEEEE
Confidence 999999988887654 47899999975 354554 47999999999998887765432 44555556666666433
Q ss_pred C-------CCCcEEEEeeCCcceEEeeccccceeEEEECCCCC-EEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEE
Q 020784 236 L-------QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQSG 307 (321)
Q Consensus 236 s-------~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~-~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~ 307 (321)
. .||.|++||..++.......|...+.+++|+|+|+ ++++++.|++ |++||+.+++++..+..+.....+.
T Consensus 273 ~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-v~v~d~~~~~~~~~~~~~~~~~~~~ 351 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSK-IEVYDLKEKKVQKSIPVFDKPNTIA 351 (433)
T ss_dssp EESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTE-EEEEETTTTEEEEEEECSSSEEEEE
T ss_pred CCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCE-EEEEECCCCcEEEEecCCCCCCeEE
Confidence 2 58899999998877666667888999999999997 5577788999 9999999999999887666666778
Q ss_pred EeecCceEEEee
Q 020784 308 LWLSSAWLRVLR 319 (321)
Q Consensus 308 ~s~d~~~la~~~ 319 (321)
+++++++|+++.
T Consensus 352 ~s~dg~~l~~~~ 363 (433)
T 3bws_A 352 LSPDGKYLYVSC 363 (433)
T ss_dssp ECTTSSEEEEEE
T ss_pred EcCCCCEEEEEe
Confidence 899999988764
No 126
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.6e-21 Score=177.21 Aligned_cols=192 Identities=9% Similarity=-0.003 Sum_probs=137.8
Q ss_pred CCeEEEEEcCCCCEEEEEcCCc-EEEEEec---------CCceeEEeeeecCCceEEEEEec--CCCeEEEEeCCCCCCC
Q 020784 86 PTLLHISFNQDHGCFAAGTDHG-FRIYNCD---------PFREIFRRDFERGGGIGVVEMLF--RCNILALVGGGPDPQY 153 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~g-v~vw~~~---------~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~~~sg~~~~~~ 153 (321)
..|+++.|+|+ |++|+.|+ +++|+.+ +.+.+......|.+.+..+++++ +++.+++++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s------- 146 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWAD------- 146 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEE-------
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe-------
Confidence 46777888888 77777654 7899654 44433333322456799999998 888888887
Q ss_pred CCCcEEEEeCCCCcEEEEEee--CCceeEEEEeCCe--EEEEE-CCEEEEEEcCCcEEE-EEEec-cCCCCceEEEeeCC
Q 020784 154 PLNKVMIWDDHQSRCIGELSF--RSEVRSVKLRRDR--IIVVL-EQKIFVYNFADLKLL-HQIET-IANPKGLCAVSQGV 226 (321)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~--~~~v~~v~~~~~~--~~~~~-~~~I~iwd~~~~~~~-~~l~~-~~~~~~~~~~s~~~ 226 (321)
.|++|++||+++++.+..... ...+.+++|+++. +++++ ++.|++||+++++.+ .++.. |..++..++|+ +
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs--~ 224 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFA--D 224 (343)
T ss_dssp TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEEC--T
T ss_pred CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEe--C
Confidence 689999999999988665533 3469999999875 33333 579999999998877 77877 66665555555 4
Q ss_pred CceEEEeecCCCCcEEEEeeCCcc-eEEee---cccccee--EEEECCCCCEEEEEeC-CCcEEEEEEcCCCc
Q 020784 227 GSLVLVCPGLQKGQVRVEHYASKR-TKFIM---AHDSRIA--CFALTQDGQLLATSST-KGTLVRIFNTLDGT 292 (321)
Q Consensus 227 d~~~la~sGs~dg~V~i~d~~~~~-~~~l~---~H~~~V~--~vafspdg~~las~S~-Dgt~IrIWd~~tg~ 292 (321)
++.+|++ |+ ++.|++||+.... ...+. .|...+. +++|+|+|++||+++. |+. |+||++.++.
T Consensus 225 ~g~~l~s-~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~-i~v~~~~~~~ 294 (343)
T 3lrv_A 225 NGYWMVV-EC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS-LTIYKFDKKT 294 (343)
T ss_dssp TSSEEEE-EE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTE-EEEEEECTTT
T ss_pred CCCEEEE-Ee-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCc-EEEEEEcccc
Confidence 5688884 66 5599999988654 33333 3555555 6999999999999998 888 9999997654
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=2.7e-18 Score=160.42 Aligned_cols=217 Identities=11% Similarity=-0.008 Sum_probs=156.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCC----cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDH----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~----gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v 158 (321)
.|...|.+++|+|||++||+++.+ .+++||+.+++...... +.+.+..++|+++++.+++++..+ .+..|
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~--~~~~~~~~~~spdg~~la~~~~~~----g~~~i 249 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS--FPRHNGAPAFSPDGSKLAFALSKT----GSLNL 249 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC--CSSCEEEEEECTTSSEEEEEECTT----SSCEE
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec--CCCcccCEEEcCCCCEEEEEEecC----CCceE
Confidence 466789999999999999988764 58899999887653332 467788999999999888665321 23569
Q ss_pred EEEeCCCCcEEEEEeeCCceeEEEEeCCe--EEEEEC--C--EEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEE
Q 020784 159 MIWDDHQSRCIGELSFRSEVRSVKLRRDR--IIVVLE--Q--KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~--~--~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la 232 (321)
++||+.+++......+...+.++.|+++. ++.+.+ + .|.+||+.+++. ..+..+... ...+.+.+|+.+|+
T Consensus 250 ~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~--~~~~~~spdG~~l~ 326 (415)
T 2hqs_A 250 YVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQ--NQDADVSSDGKFMV 326 (415)
T ss_dssp EEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSE--EEEEEECTTSSEEE
T ss_pred EEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCc--ccCeEECCCCCEEE
Confidence 99999988875444445578899999764 555554 2 788889987764 334333333 33444555667777
Q ss_pred eecCCC--CcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCC---cEEEEEEcCCCcEEEEEeCCCcceeEE
Q 020784 233 CPGLQK--GQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG---TLVRIFNTLDGTLLQEECCPSISAQSG 307 (321)
Q Consensus 233 ~sGs~d--g~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dg---t~IrIWd~~tg~~i~~~~~g~~~~~~~ 307 (321)
+++..+ +.|.+||..++....+..|. .+.+++|+|||++|++++.|+ . |++||+.. +..+.+ .++...+..
T Consensus 327 ~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~-l~~~d~~g-~~~~~l-~~~~~~v~~ 402 (415)
T 2hqs_A 327 MVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSV-LNLVSTDG-RFKARL-PATDGQVKF 402 (415)
T ss_dssp EEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEE-EEEEETTS-CCEEEC-CCSSSEEEE
T ss_pred EEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccE-EEEEECCC-CcEEEe-eCCCCCCcC
Confidence 644443 47888999888777777775 899999999999999998887 6 99999874 445666 345445555
Q ss_pred EeecC
Q 020784 308 LWLSS 312 (321)
Q Consensus 308 ~s~d~ 312 (321)
.+|++
T Consensus 403 ~~~~~ 407 (415)
T 2hqs_A 403 PAWSP 407 (415)
T ss_dssp EEECC
T ss_pred Ccccc
Confidence 55554
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.3e-18 Score=152.25 Aligned_cols=227 Identities=7% Similarity=-0.087 Sum_probs=158.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEEecC-CceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEE
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDP-FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~-~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iW 161 (321)
.|...|.+++|+|||++|++++++.+.+||+++ .+........+...+..++++++++.+++++... ++.++||
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~~~~l~ 113 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE-----FGKSAIY 113 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT-----TSSCEEE
T ss_pred cCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCC-----CCcceEE
Confidence 356689999999999999999988899999988 6654333220124567789999999998887331 2445555
Q ss_pred --eCCCCcEEEEEeeCCceeEEEEeCCe--EEE-E-ECCEEEEEEc--CCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 162 --DDHQSRCIGELSFRSEVRSVKLRRDR--IIV-V-LEQKIFVYNF--ADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 162 --D~~~~~~~~~~~~~~~v~~v~~~~~~--~~~-~-~~~~I~iwd~--~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
|..++. ...+.....+..+.|+++. +++ + .++.+++|++ .+++. ..+..+... +..+...+++..+++
T Consensus 114 ~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~--~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 114 LLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHGEGR--NDGPDYSPDGRWIYF 189 (297)
T ss_dssp EEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCCSSSC--EEEEEECTTSSEEEE
T ss_pred EEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcccCCCc--cccceECCCCCEEEE
Confidence 455554 3445555568888998763 442 3 3578888886 34433 444444333 344455556677776
Q ss_pred ecCCCCcEEEEeeC--CcceEEeeccccceeEEEECCCCCEEEEEeCC-----------CcEEEEEEcCCCcEE--EEEe
Q 020784 234 PGLQKGQVRVEHYA--SKRTKFIMAHDSRIACFALTQDGQLLATSSTK-----------GTLVRIFNTLDGTLL--QEEC 298 (321)
Q Consensus 234 sGs~dg~V~i~d~~--~~~~~~l~~H~~~V~~vafspdg~~las~S~D-----------gt~IrIWd~~tg~~i--~~~~ 298 (321)
++..++.++||++. .+....+..|...+.+++|+|+|++|+.++.| +. |++||+.+++.. ..+.
T Consensus 190 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR-VQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp EECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE-EEEEETTSCSCEEEEEEE
T ss_pred EecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE-EEEEecCCCCceeeeccC
Confidence 56678899998764 45577888899999999999999999998876 45 999999998763 3332
Q ss_pred C-CCcceeEEEeecCceEEEee
Q 020784 299 C-PSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 299 ~-g~~~~~~~~s~d~~~la~~~ 319 (321)
. ......+.+++|+++|+++.
T Consensus 269 ~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 269 GGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp ESTTTSCSCCBCTTSSEEEEEE
T ss_pred CCCcccccceECCCCCEEEEEE
Confidence 1 22344568889999998875
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.82 E-value=1.4e-17 Score=149.36 Aligned_cols=228 Identities=12% Similarity=0.077 Sum_probs=155.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC--CcEEEEEec--CCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 84 PPPTLLHISFNQDHGCFAAGTD--HGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~--~gv~vw~~~--~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
+...+.+++|+|||++|++++. +.+++|+++ +++......+...+.+..++++++++.+++++. .++.|+
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~~~~i~ 109 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSY------NAGNVS 109 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEET------TTTEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEec------CCCeEE
Confidence 3446888999999998887776 458899998 444332223222346778889999998877763 358899
Q ss_pred EEeCC---CCcEEEEEeeCCceeEEEEeCC--eEEEEE--CCEEEEEEcCC-cEEEE----EEeccCCCCceEEEeeCCC
Q 020784 160 IWDDH---QSRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFAD-LKLLH----QIETIANPKGLCAVSQGVG 227 (321)
Q Consensus 160 iWD~~---~~~~~~~~~~~~~v~~v~~~~~--~~~~~~--~~~I~iwd~~~-~~~~~----~l~~~~~~~~~~~~s~~~d 227 (321)
+||+. .++.+..+.....+.++.|+++ .++++. ++.|++||+.+ ++... .+.... ......+..+++
T Consensus 110 ~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pd 188 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE-GAGPRHMVFHPN 188 (343)
T ss_dssp EEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST-TCCEEEEEECTT
T ss_pred EEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC-CCCcceEEECCC
Confidence 99994 4445555555667888999876 455554 47999999987 65432 222221 123344555666
Q ss_pred ceEEEeecCCCCcEEEEeeCC--cceE---Eee----cc--ccceeEEEECCCCCEEE-EEeCCCcEEEEEEcC--C--C
Q 020784 228 SLVLVCPGLQKGQVRVEHYAS--KRTK---FIM----AH--DSRIACFALTQDGQLLA-TSSTKGTLVRIFNTL--D--G 291 (321)
Q Consensus 228 ~~~la~sGs~dg~V~i~d~~~--~~~~---~l~----~H--~~~V~~vafspdg~~la-s~S~Dgt~IrIWd~~--t--g 291 (321)
+.++++++..++.|.+|++.. +.+. .+. +| ...+..++|+|+|++|+ +++.|+. |++||+. + .
T Consensus 189 g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~-i~v~d~~~~~~~~ 267 (343)
T 1ri6_A 189 EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL-ITVFSVSEDGSVL 267 (343)
T ss_dssp SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTSCCE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE-EEEEEEcCCCCce
Confidence 676655577889999999853 3222 222 11 23577899999998776 5557888 9999998 3 3
Q ss_pred cEEEEEeCCCcceeEEEeecCceEEEee
Q 020784 292 TLLQEECCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 292 ~~i~~~~~g~~~~~~~~s~d~~~la~~~ 319 (321)
+.+..+..+.....+.+++||++|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 268 SKEGFQPTETQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp EEEEEEECSSSCCCEEECTTSSEEEEEC
T ss_pred EEeeeecCCCccceEEECCCCCEEEEec
Confidence 5566666555566678899999988763
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=8.8e-17 Score=145.02 Aligned_cols=220 Identities=13% Similarity=0.032 Sum_probs=166.2
Q ss_pred CCeEEEEEcCCCCEEEEEcC--------CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 86 PTLLHISFNQDHGCFAAGTD--------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~--------~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
..+..++|+|||++|++++. +.|.+||..+++....... ......+.++++++.++++.. .++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~------~~~~ 112 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNT------VNSA 112 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEET------TTTE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEec------CCCE
Confidence 46889999999998887763 3488999998887666554 455667788899987776663 3589
Q ss_pred EEEEeCCCCcEEEEEeeCC----------ceeEEEEeCC--eEEEEE---CCEEEEEEcCCcEEEEEEeccCCCCceEEE
Q 020784 158 VMIWDDHQSRCIGELSFRS----------EVRSVKLRRD--RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAV 222 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~~~~----------~v~~v~~~~~--~~~~~~---~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~ 222 (321)
|.+||.++++.+..+.... .+.++.++++ .++++. ++.|.+||+.+++.+..+..+......+++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 9999999999888877643 2678899875 466654 468999999999998888744333445666
Q ss_pred eeCCCceEEEeecCCCCcEEEEeeCCcceE-Eeec----cccceeEEEECCCCCEEEEEeCC-CcEEEEEEcCCCcEEEE
Q 020784 223 SQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIMA----HDSRIACFALTQDGQLLATSSTK-GTLVRIFNTLDGTLLQE 296 (321)
Q Consensus 223 s~~~d~~~la~sGs~dg~V~i~d~~~~~~~-~l~~----H~~~V~~vafspdg~~las~S~D-gt~IrIWd~~tg~~i~~ 296 (321)
++++ ..+++ ++.++.|.+||..++... .+.. +...+..++|+|+|++|+.++.+ +. |.+||+.+++.+..
T Consensus 193 s~dg--~~l~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 193 DSEG--KRLYT-TNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE-VLVVDTRNGNILAK 268 (353)
T ss_dssp ETTT--TEEEE-ECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE-EEEEETTTCCEEEE
T ss_pred CCCC--CEEEE-EcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE-EEEEECCCCcEEEE
Confidence 6654 55554 466899999998876643 4443 56678899999999977666655 66 99999999999998
Q ss_pred EeCCCcceeEEEeecCceEEEe
Q 020784 297 ECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 297 ~~~g~~~~~~~~s~d~~~la~~ 318 (321)
+..+. ...+.+++||++|.++
T Consensus 269 ~~~~~-~~~~~~s~dg~~l~v~ 289 (353)
T 3vgz_A 269 VAAPE-SLAVLFNPARNEAYVT 289 (353)
T ss_dssp EECSS-CCCEEEETTTTEEEEE
T ss_pred EEcCC-CceEEECCCCCEEEEE
Confidence 87655 3557889999987665
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.81 E-value=2e-17 Score=154.58 Aligned_cols=212 Identities=13% Similarity=0.035 Sum_probs=151.9
Q ss_pred CCEEEEEcC-------CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEE
Q 020784 97 HGCFAAGTD-------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI 169 (321)
Q Consensus 97 g~~lasg~~-------~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~ 169 (321)
+..|+.++. ..+++||++..... .... |.+.+..++|+++++.++.++... .+.+|++||+++++..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~-~l~~-~~~~v~~~~~Spdg~~la~~s~~~----~~~~i~~~d~~tg~~~ 216 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQF-VVHR-SPQPLMSPAWSPDGSKLAYVTFES----GRSALVIQTLANGAVR 216 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCE-EEEE-ESSCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCE-EEeC-CCCcceeeEEcCCCCEEEEEEecC----CCcEEEEEECCCCcEE
Confidence 555655443 35889999754432 2222 578899999999999999888321 1258999999999877
Q ss_pred EEEeeCCceeEEEEeCCe--EEEEE--C--CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCC--cE
Q 020784 170 GELSFRSEVRSVKLRRDR--IIVVL--E--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG--QV 241 (321)
Q Consensus 170 ~~~~~~~~v~~v~~~~~~--~~~~~--~--~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg--~V 241 (321)
....+...+.++.|+++. ++... + ..|++||+.+++. ..+..+... ...+.+.+|+..|++++..+| .|
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~--~~~~~~spdg~~l~~~s~~~g~~~i 293 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSN--NTEPTWFPDSQNLAFTSDQAGRPQV 293 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSC--EEEEEECTTSSEEEEEECTTSSCEE
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCc--ccceEECCCCCEEEEEECCCCCcEE
Confidence 555566689999999864 44343 2 3699999988776 455555443 344445556677776454456 45
Q ss_pred EEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCC---CcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 242 RVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK---GTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 242 ~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~D---gt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
.+||..++....+..|...+.+++|+|||++|++++.+ .. |++||+.++++. .+..........+++||++|+++
T Consensus 294 ~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~-i~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 294 YKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH-IAKQDLATGGVQ-VLSSTFLDETPSLAPNGTMVIYS 371 (415)
T ss_dssp EEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE-EEEEETTTCCEE-ECCCSSSCEEEEECTTSSEEEEE
T ss_pred EEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceE-EEEEECCCCCEE-EecCCCCcCCeEEcCCCCEEEEE
Confidence 55788777777777888899999999999999998875 46 999999999884 45433334456889999999876
Q ss_pred e
Q 020784 319 R 319 (321)
Q Consensus 319 ~ 319 (321)
+
T Consensus 372 s 372 (415)
T 2hqs_A 372 S 372 (415)
T ss_dssp E
T ss_pred E
Confidence 4
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.81 E-value=3e-17 Score=158.72 Aligned_cols=222 Identities=10% Similarity=-0.036 Sum_probs=159.7
Q ss_pred CeEEEEEcCCCCEEEEEcC-CcEEEEEe--cCCceeEEeeeecCCceEEEEEec----CCCeEEEEeCCCCCCCCCCcEE
Q 020784 87 TLLHISFNQDHGCFAAGTD-HGFRIYNC--DPFREIFRRDFERGGGIGVVEMLF----RCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~-~gv~vw~~--~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
.+.+++|+|||++|++++. +.|++||+ .+++.+.... ++.....+++++ +++.+++++. .+++|+
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~------~~~~v~ 251 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYEDRYTIAGAY------WPPQFA 251 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEE------ESSEEE
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEc------cCCeEE
Confidence 3899999999999998887 55889999 7777655554 356678889998 8988877762 358899
Q ss_pred EEeCCCCcEEEEEeeC-----------C-cee--------------------------------------------EEEE
Q 020784 160 IWDDHQSRCIGELSFR-----------S-EVR--------------------------------------------SVKL 183 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~-----------~-~v~--------------------------------------------~v~~ 183 (321)
|||..+++++..+... . .+. .+.|
T Consensus 252 v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~ 331 (543)
T 1nir_A 252 IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGW 331 (543)
T ss_dssp EEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEE
T ss_pred EEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceE
Confidence 9998887776655421 0 122 2334
Q ss_pred eCC--eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCC--ceEEEeeCCC-ceEEEeecCCCCcEEEEeeCC--------
Q 020784 184 RRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANPK--GLCAVSQGVG-SLVLVCPGLQKGQVRVEHYAS-------- 248 (321)
Q Consensus 184 ~~~--~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~--~~~~~s~~~d-~~~la~sGs~dg~V~i~d~~~-------- 248 (321)
+++ .++++. +++|.+||+.+++++.++.....+. ....+. +++ +.+++++...|++|.+|+...
T Consensus 332 spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~-~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~ 410 (543)
T 1nir_A 332 DSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFV-HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW 410 (543)
T ss_dssp CTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEE-ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred CCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccC-CCCCccEEEeccCCCceEEEEEeCCCCCchhcC
Confidence 443 244443 4699999999999999887643222 233343 233 566664233689999999875
Q ss_pred cceEEeeccccceeEEEECCCCCEEEEEe-------CCCcEEEEEEcCCCcEE-EEEe--------C-CCcceeEEEeec
Q 020784 249 KRTKFIMAHDSRIACFALTQDGQLLATSS-------TKGTLVRIFNTLDGTLL-QEEC--------C-PSISAQSGLWLS 311 (321)
Q Consensus 249 ~~~~~l~~H~~~V~~vafspdg~~las~S-------~Dgt~IrIWd~~tg~~i-~~~~--------~-g~~~~~~~~s~d 311 (321)
+.+.++..|...+..|+|+|||++|++++ .+++ |+|||+.++++. ..+. . +.......|++|
T Consensus 411 ~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~-v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 489 (543)
T 1nir_A 411 KKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS-VAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR 489 (543)
T ss_dssp SEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC-EEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSS
T ss_pred eEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce-EEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCC
Confidence 34678999999999999999999999987 2778 999999999987 4442 1 233345588899
Q ss_pred CceEEEe
Q 020784 312 SAWLRVL 318 (321)
Q Consensus 312 ~~~la~~ 318 (321)
|++|.++
T Consensus 490 g~~~~~s 496 (543)
T 1nir_A 490 GDEVWFS 496 (543)
T ss_dssp SSEEEEE
T ss_pred CCEEEEE
Confidence 9998865
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=8.2e-17 Score=145.21 Aligned_cols=223 Identities=11% Similarity=0.043 Sum_probs=162.2
Q ss_pred CeEEEEEcCCCCEEEEE-cC-CcEEEEEecCCceeEEeeeecCC---------ceEEEEEecCCCeEEEEeCCCCCCCCC
Q 020784 87 TLLHISFNQDHGCFAAG-TD-HGFRIYNCDPFREIFRRDFERGG---------GIGVVEMLFRCNILALVGGGPDPQYPL 155 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg-~~-~gv~vw~~~~~~~~~~~~~~~~~---------~v~~v~~~~~~~~~~~~sg~~~~~~~d 155 (321)
.+.+++|++||++++.+ .. +.+.+||..+++....... +.+ ....+.++++++.++++..+ .+
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~ 163 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVL-DDRKRTEEVRPLQPRELVADDATNTVYISGIG-----KE 163 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEES-CCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-----SS
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEec-CCCccccccCCCCCceEEECCCCCEEEEEecC-----CC
Confidence 46789999999966544 43 4588999998887655554 111 15678889999888777633 35
Q ss_pred CcEEEEeCCCCcEEEEEe-eCCceeEEEEeCC--eEEEEE-CCEEEEEEcCCcEEEEEEeccCC--CCceEEEeeCCCce
Q 020784 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIAN--PKGLCAVSQGVGSL 229 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~--~~~~~~~s~~~d~~ 229 (321)
+.|.+||..+++.+..+. ....+..+.|+++ .++++. ++.|.+||+.+++.+..+..... ......+..++++.
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 889999999999888887 4445888889875 455554 46999999999999888875322 12233333344445
Q ss_pred EEEeecCCCCcEEEEeeCCcce-EEeeccccceeEEEECCCCCEEE-EEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEE
Q 020784 230 VLVCPGLQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLA-TSSTKGTLVRIFNTLDGTLLQEECCPSISAQSG 307 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~~~~~-~~l~~H~~~V~~vafspdg~~la-s~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~ 307 (321)
.+++++..++.|.+||..++.. ..+..+. ...++|+|+|+++. +...+++ |.+||+.+++.+.++..+.....+.
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~-v~~~d~~~~~~~~~~~~~~~~~~~~ 320 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGK-VSVIDAKSYKVVKTFDTPTHPNSLA 320 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTE-EEEEETTTTEEEEEEECCSEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCe-EEEEECCCCeEEEEEecCCCCCeEE
Confidence 5554566778999999977653 3444333 36799999999554 4446888 9999999999999998777667778
Q ss_pred EeecCceEEEe
Q 020784 308 LWLSSAWLRVL 318 (321)
Q Consensus 308 ~s~d~~~la~~ 318 (321)
+++||++|.++
T Consensus 321 ~s~dg~~l~v~ 331 (353)
T 3vgz_A 321 LSADGKTLYVS 331 (353)
T ss_dssp ECTTSCEEEEE
T ss_pred EcCCCCEEEEE
Confidence 99999988775
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.79 E-value=1.3e-16 Score=143.10 Aligned_cols=216 Identities=10% Similarity=0.102 Sum_probs=153.5
Q ss_pred EEEcCCCCE-EEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcE
Q 020784 91 ISFNQDHGC-FAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC 168 (321)
Q Consensus 91 v~fs~dg~~-lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~ 168 (321)
..|.+++.+ +++++. +.|++||.++++....... +.... .++++++++.+++++.+ ++.|.+||..+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL-GYDFV-DTAITSDCSNVVVTSDF------CQTLVQIETQLEPP 74 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC-CCCEE-EEEECSSSCEEEEEEST------TCEEEEEECSSSSC
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc-cCCcc-eEEEcCCCCEEEEEeCC------CCeEEEEECCCCce
Confidence 346666665 556655 5588999999887665554 33445 88889999877777642 57999999999987
Q ss_pred -EEEEeeCCceeE-EEEeCC--eEEEEECC----EEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCc
Q 020784 169 -IGELSFRSEVRS-VKLRRD--RIIVVLEQ----KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (321)
Q Consensus 169 -~~~~~~~~~v~~-v~~~~~--~~~~~~~~----~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~ 240 (321)
...+.....+.. +.|+++ .+++...+ .|++||+.+++.+..+..+..+ ..+..++|+..+++++..++.
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~---~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDA---VGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTE---EEEEECTTSSCEEEEEETTTT
T ss_pred eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCc---cceEECCCCCEEEEEecCCCc
Confidence 667776666666 899876 45533333 8999999999998888765433 344445555544444666678
Q ss_pred -EEEEeeCCcc-e----EEeeccccceeEEEECCCCCEE-EEEeCCCcEEEEEEcCCCcE---EEEEeCCCcceeEEEee
Q 020784 241 -VRVEHYASKR-T----KFIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDGTL---LQEECCPSISAQSGLWL 310 (321)
Q Consensus 241 -V~i~d~~~~~-~----~~l~~H~~~V~~vafspdg~~l-as~S~Dgt~IrIWd~~tg~~---i~~~~~g~~~~~~~~s~ 310 (321)
|.+|++.... + .....+...+..++|+|+|++| +++..+++ |++||+.+++. +.++..+.....+.+++
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~~~~~~~~~~sp 230 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGTNNLPGTIVVSR 230 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEECSSCCCCEEECT
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccCCCCCceEEECC
Confidence 9999976422 2 1222345568999999999955 44556777 99999999998 88888776677789999
Q ss_pred cCceEEEe
Q 020784 311 SSAWLRVL 318 (321)
Q Consensus 311 d~~~la~~ 318 (321)
||++|.++
T Consensus 231 dg~~l~v~ 238 (331)
T 3u4y_A 231 DGSTVYVL 238 (331)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 99988775
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.79 E-value=2.7e-16 Score=140.94 Aligned_cols=221 Identities=10% Similarity=0.074 Sum_probs=153.3
Q ss_pred CCeEEEEEcCCCCEEEEEcC--CcEEEEEecCCce-eEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCC--cEEE
Q 020784 86 PTLLHISFNQDHGCFAAGTD--HGFRIYNCDPFRE-IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN--KVMI 160 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~--~gv~vw~~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~--~v~i 160 (321)
..+ +++|+|||++|++++. +.+.+||.++.+. ...... +......+.++++++.++ ++.. .++ .|.+
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~-~~~~-----~~~~~~i~v 112 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE-GQSSMADVDITPDDQFAV-TVTG-----LNHPFNMQS 112 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE-CSSCCCCEEECTTSSEEE-ECCC-----SSSSCEEEE
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc-CCCCccceEECCCCCEEE-EecC-----CCCcccEEE
Confidence 356 9999999997665544 4588999988876 444443 233444378899999888 4422 113 8999
Q ss_pred EeCCCCcEEEEEeeCCceeEEEEeCC--eEEEE-EC-CE-EEEEEcCCcEEE-----EEEeccCCCCceEEEeeCCCceE
Q 020784 161 WDDHQSRCIGELSFRSEVRSVKLRRD--RIIVV-LE-QK-IFVYNFADLKLL-----HQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~-~~-~~-I~iwd~~~~~~~-----~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
||..+++.+..+.....+..+.|+++ .++++ .+ +. |.+|++.....+ ..+.. ......+..++|+..
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG---GTRPFNITFTPDGNF 189 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS---SSSEEEEEECTTSSE
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC---CCCccceEECCCCCE
Confidence 99999999888888778899999987 35555 33 56 999998653222 12211 122344555566675
Q ss_pred EEeecCCCCcEEEEeeCCcce----EEeeccccceeEEEECCCCCEEEEEe-CCCcEEEEEEcCCCcE--EEEEeCC---
Q 020784 231 LVCPGLQKGQVRVEHYASKRT----KFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL--LQEECCP--- 300 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~~~~~----~~l~~H~~~V~~vafspdg~~las~S-~Dgt~IrIWd~~tg~~--i~~~~~g--- 300 (321)
+++++..++.|.+||..++.. ..+. +...+..++|+|||++|+.++ .++. |.+||+.++++ +.++..+
T Consensus 190 l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 190 AFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVD-VFNFNQLSGTLSFVKSFGHGLLI 267 (331)
T ss_dssp EEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEE-EEEEETTTTEEEEEEEEECCCCC
T ss_pred EEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCE-EEEEECCCCceeeeccccccccc
Confidence 555577889999999886554 3444 447789999999999766554 4666 99999999988 5655433
Q ss_pred -Ccc----eeEEEeecCceEEEee
Q 020784 301 -SIS----AQSGLWLSSAWLRVLR 319 (321)
Q Consensus 301 -~~~----~~~~~s~d~~~la~~~ 319 (321)
... ..+.+++||++|.++.
T Consensus 268 ~~~~~~~~~~~~~spdg~~l~v~~ 291 (331)
T 3u4y_A 268 DPRPLFGANQMALNKTETKLFISA 291 (331)
T ss_dssp CCGGGTTCCCEEECTTSSEEEEEE
T ss_pred CCCCcccccceEECCCCCEEEEec
Confidence 111 1258899999987753
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.79 E-value=1.2e-16 Score=154.51 Aligned_cols=199 Identities=12% Similarity=0.089 Sum_probs=153.3
Q ss_pred EEcCCCCEEEEEcCC-cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC--CCCcE
Q 020784 92 SFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD--HQSRC 168 (321)
Q Consensus 92 ~fs~dg~~lasg~~~-gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~--~~~~~ 168 (321)
.|+|+++++++++.+ .|.+||..+++.+..... +..+..+.++++++.+++++ .|++|++||+ .++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~--g~~~~~v~~spdg~~l~v~~-------~d~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT--GYAVHISRMSASGRYLLVIG-------RDARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC--STTEEEEEECTTSCEEEEEE-------TTSEEEEEETTSSSCEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec--CcccceEEECCCCCEEEEEC-------CCCeEEEEECcCCCCcE
Confidence 489999999988875 588999999988766653 34477888999999999888 5699999999 88999
Q ss_pred EEEEeeCCceeEEEEeC----C--eEEEEE--CCEEEEEEcCCcEEEEEEeccCC---------CCceEEEeeCCCceEE
Q 020784 169 IGELSFRSEVRSVKLRR----D--RIIVVL--EQKIFVYNFADLKLLHQIETIAN---------PKGLCAVSQGVGSLVL 231 (321)
Q Consensus 169 ~~~~~~~~~v~~v~~~~----~--~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~---------~~~~~~~s~~~d~~~l 231 (321)
+.++.....+..+.|++ + .++++. +++|.+||..++++++++..+.. ...+.++...+++..+
T Consensus 215 ~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 215 VAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp EEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred EEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 88888877899999997 4 455553 58999999999999999875321 1123344444444444
Q ss_pred EeecCCCCcEEEEeeCCcc-eE-EeeccccceeEEEECCCCCEEEEE-eCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 232 VCPGLQKGQVRVEHYASKR-TK-FIMAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 232 a~sGs~dg~V~i~d~~~~~-~~-~l~~H~~~V~~vafspdg~~las~-S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
+++...+|.|.+||+.... +. ....+...++.++|+|+|++|+++ ..+++ |+|||+.+|+++.++..+
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i~~g 365 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALVDVG 365 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECS
T ss_pred EEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEeeccC
Confidence 4468889999999987643 22 223467789999999999976655 45788 999999999999998765
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=4.5e-17 Score=145.62 Aligned_cols=225 Identities=8% Similarity=-0.039 Sum_probs=161.8
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCceeEEeeeec----CCceEEEEEecCCCeEEEEeCCC---CCCC--CC
Q 020784 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFER----GGGIGVVEMLFRCNILALVGGGP---DPQY--PL 155 (321)
Q Consensus 87 ~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~~~~~~~~~~----~~~v~~v~~~~~~~~~~~~sg~~---~~~~--~d 155 (321)
.+.+++|+|||++|+ ++.. +.|.+||+.+++.+......+ ...+..+.++++++.++++..+. ...+ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 367899999998765 4544 458899999887765544311 01455678888888887774110 0000 14
Q ss_pred CcEEEEeCCCCcEEEEEeeCCceeEEEEeCCe--EEEEECCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR--IIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
+.|.+||..+++.+..+.....+..+.|+++. ++++ ++.|++||+.+++.+..+..+.... ...++++ +..+++
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~s~d--g~~l~~ 190 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVMDPEAGTLVEDKPIQSWEA-ETYAQPD--VLAVWN 190 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEEETTTTEEEEEECSTTTTT-TTBCCCB--CCCCCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEEECCCCcEeeeeeccccCC-CceeCCC--ccEEee
Confidence 89999999999888888777778889998764 4444 7899999999999888877654222 1244444 444443
Q ss_pred ecCCCCc-----------------------EEEEeeCCcceE--EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEc
Q 020784 234 PGLQKGQ-----------------------VRVEHYASKRTK--FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (321)
Q Consensus 234 sGs~dg~-----------------------V~i~d~~~~~~~--~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~ 288 (321)
++..++. |.+||..++... .+..|...+.+++|+|||++|+++ ++. |++||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~-v~~~d~ 267 (337)
T 1pby_B 191 QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV-LESFDL 267 (337)
T ss_dssp CCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE-EEEEET
T ss_pred eccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe-EEEEEC
Confidence 3444443 567888776543 455677789999999999999988 688 999999
Q ss_pred CCCcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 289 LDGTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 289 ~tg~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
.+++.+..+..+.....+.+++||++|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 268 EKNASIKRVPLPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp TTTEEEEEEECSSCCCEEEECTTSCEEEEE
T ss_pred CCCcCcceecCCCceeeEEECCCCCEEEEE
Confidence 999999988877767777889999998875
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=3.7e-16 Score=141.35 Aligned_cols=226 Identities=14% Similarity=0.141 Sum_probs=147.8
Q ss_pred CCeEEEEEcCCCCEEEEEc---CCcEEEEEecCCceeEEeee-ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEE
Q 020784 86 PTLLHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~---~~gv~vw~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iW 161 (321)
..+..++|+|||++++++. ++.|.+|++++++....... .+......++++++++.+++++. .+++|++|
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~------~~~~v~v~ 113 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY------HKGTAEVM 113 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET------TTTEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC------CCCEEEEE
Confidence 3566799999999444443 24588999987664322221 13566778899999998887763 35899999
Q ss_pred eCC-CCc--EEEEEeeC----------CceeEEEEeCCe-EEEEE--CCEEEEEEcC-CcEEEE--EEeccCCCCceEEE
Q 020784 162 DDH-QSR--CIGELSFR----------SEVRSVKLRRDR-IIVVL--EQKIFVYNFA-DLKLLH--QIETIANPKGLCAV 222 (321)
Q Consensus 162 D~~-~~~--~~~~~~~~----------~~v~~v~~~~~~-~~~~~--~~~I~iwd~~-~~~~~~--~l~~~~~~~~~~~~ 222 (321)
|+. ++. .+..+... ..+.++.|+++. ++++. ++.|++|++. ++++.. .+..... .....+
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-~~p~~~ 192 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG-FGPRHL 192 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT-CCEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC-CCCceE
Confidence 996 333 23333322 137789998764 44443 4699999998 554332 2222211 123334
Q ss_pred eeCCCceEEEeecCCCCcEEEEeeCC--cceE---Eeeccc------cceeEEEECCCCCEE-EEEeCCCcEEEEEEcC-
Q 020784 223 SQGVGSLVLVCPGLQKGQVRVEHYAS--KRTK---FIMAHD------SRIACFALTQDGQLL-ATSSTKGTLVRIFNTL- 289 (321)
Q Consensus 223 s~~~d~~~la~sGs~dg~V~i~d~~~--~~~~---~l~~H~------~~V~~vafspdg~~l-as~S~Dgt~IrIWd~~- 289 (321)
.+++|+.++++++..++.|.+|++.. +.+. .+..+. ..+..++|+|||++| ++...+++ |+||++.
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~-v~v~~~~~ 271 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT-LAVFAVTA 271 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-EEEEEECG
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-EEEEEECC
Confidence 45556676655678889999998764 3322 232222 458999999999977 56666888 9999997
Q ss_pred --CCcEEEEEeC-CCcceeEEEeecCceEEEee
Q 020784 290 --DGTLLQEECC-PSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 290 --tg~~i~~~~~-g~~~~~~~~s~d~~~la~~~ 319 (321)
+.+.+.++.. +.....+.+++||++|+++.
T Consensus 272 ~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 272 DGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp GGCEEEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred CCcEEEeEEEecCCCCcCeEEECCCCCEEEEEE
Confidence 3355666655 33456678999999998864
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.77 E-value=1.6e-17 Score=165.39 Aligned_cols=220 Identities=12% Similarity=0.008 Sum_probs=156.8
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-C------cEEEEEecCCceeEEeeeecCC------------------------ceEEE
Q 020784 85 PPTLLHISFNQDHGCFAAGTD-H------GFRIYNCDPFREIFRRDFERGG------------------------GIGVV 133 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~-~------gv~vw~~~~~~~~~~~~~~~~~------------------------~v~~v 133 (321)
...|.+++|+|||++|++++. + .+++||+++++....... +.. .+..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDS-KVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECG-GGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccch-hhcccccccccchhhhhhhhhhhccccCccee
Confidence 447999999999999998876 4 478999988876444332 122 25678
Q ss_pred EEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCC---cEEEEEeeCCceeEEEEeCCe--EEEEECCEEEEEEcCCcEEEE
Q 020784 134 EMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS---RCIGELSFRSEVRSVKLRRDR--IIVVLEQKIFVYNFADLKLLH 208 (321)
Q Consensus 134 ~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~---~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~I~iwd~~~~~~~~ 208 (321)
+++++++.+++++ .++|++||+.++ +......+...+..+.|+++. ++.+.++.|++||+.+++..+
T Consensus 115 ~~SpDg~~l~~~~--------~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 115 QWSPDAQRLLFPL--------GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp EECTTSSEEEEEE--------TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEe--------CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE
Confidence 8999999999887 278999999988 544333344578999999864 666678899999999887655
Q ss_pred EEeccCCC----------------CceEEEeeCCCceEEEeecCCCC---------------------------------
Q 020784 209 QIETIANP----------------KGLCAVSQGVGSLVLVCPGLQKG--------------------------------- 239 (321)
Q Consensus 209 ~l~~~~~~----------------~~~~~~s~~~d~~~la~sGs~dg--------------------------------- 239 (321)
....+... ...+++++ |+..|++ ++.|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp--Dg~~l~~-~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAP--DDSAIAY-ARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECT--TSSCEEE-EEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred eccCCccceeccccceeeeeccccccceEECC--CCCEEEE-EEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 44333221 13345554 5576765 33332
Q ss_pred cEEEEeeCC-cceEEee---ccccceeEEEECCCCCEEEEEeC-----CCcEEEEEEcCCCcEEEEEeCCCc-----cee
Q 020784 240 QVRVEHYAS-KRTKFIM---AHDSRIACFALTQDGQLLATSST-----KGTLVRIFNTLDGTLLQEECCPSI-----SAQ 305 (321)
Q Consensus 240 ~V~i~d~~~-~~~~~l~---~H~~~V~~vafspdg~~las~S~-----Dgt~IrIWd~~tg~~i~~~~~g~~-----~~~ 305 (321)
.|.+||..+ +....+. .|...+.+++| |||++|+.++. +.. |++||+.+|++...+..... ...
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEECSSCCCCCSC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcCCCCcCCcCCc
Confidence 666788877 6654443 58889999999 99999997764 456 99999999998776643221 124
Q ss_pred EEEeecCceEEEe
Q 020784 306 SGLWLSSAWLRVL 318 (321)
Q Consensus 306 ~~~s~d~~~la~~ 318 (321)
..+++||++++++
T Consensus 342 ~~~spdg~~~~~~ 354 (741)
T 2ecf_A 342 LRFLDDGSILWSS 354 (741)
T ss_dssp CEECTTSCEEEEE
T ss_pred eEECCCCeEEEEe
Confidence 5889999976653
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.76 E-value=5.1e-18 Score=168.43 Aligned_cols=229 Identities=7% Similarity=-0.030 Sum_probs=160.0
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCC---ceEEEEEecCCCeEEEEeCCCCC--CCCCCcEEEE
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGG---GIGVVEMLFRCNILALVGGGPDP--QYPLNKVMIW 161 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~~~sg~~~~--~~~d~~v~iW 161 (321)
.+.+++|+|||++++++.++.+++||..+++....... |.. .+..++++++++.+++++..... ...++.|.+|
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~-~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEG-KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECT-TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEecc-ccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 46679999999988875556699999998876544432 222 37889999999999888743210 0124889999
Q ss_pred eCCCCcEEEEEeeC-C---ceeEEEEeCC--eEEEEECCEEEEEEcCCcEEEEEEeccCCCC----------------ce
Q 020784 162 DDHQSRCIGELSFR-S---EVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIETIANPK----------------GL 219 (321)
Q Consensus 162 D~~~~~~~~~~~~~-~---~v~~v~~~~~--~~~~~~~~~I~iwd~~~~~~~~~l~~~~~~~----------------~~ 219 (321)
|+.+++. ..+... . .+..+.|+++ .++.+.++.|++||+.+++..+....+...+ ..
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9998876 333322 1 3778889886 4677778899999998887766555433322 11
Q ss_pred EEEeeCCCceEEEeecCCC---------------------------------CcEEEEeeCCcc-eEEeecc------cc
Q 020784 220 CAVSQGVGSLVLVCPGLQK---------------------------------GQVRVEHYASKR-TKFIMAH------DS 259 (321)
Q Consensus 220 ~~~s~~~d~~~la~sGs~d---------------------------------g~V~i~d~~~~~-~~~l~~H------~~ 259 (321)
.++.+.+|+..|++....+ ..|.+||..++. ...+..| ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 3455566667777633221 167889988766 3566654 67
Q ss_pred ceeEEEECCCCCEEEEEeCC----CcEEEEEEcCCCcEEEEEeCCCcc------eeEEEeecCceEEEe
Q 020784 260 RIACFALTQDGQLLATSSTK----GTLVRIFNTLDGTLLQEECCPSIS------AQSGLWLSSAWLRVL 318 (321)
Q Consensus 260 ~V~~vafspdg~~las~S~D----gt~IrIWd~~tg~~i~~~~~g~~~------~~~~~s~d~~~la~~ 318 (321)
.|.+++|||||++|++.+.+ .. |++||+.+|++...+...+.. ....+++||++|+++
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSI-LTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEE-EEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEE-EEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 89999999999999877543 45 999999999987665432221 245889999998875
No 141
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=5.7e-17 Score=152.48 Aligned_cols=197 Identities=14% Similarity=0.025 Sum_probs=138.1
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCc----------eeEE----eeeecCCceEEEEEecCCCeEEEE--eCCCC
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFR----------EIFR----RDFERGGGIGVVEMLFRCNILALV--GGGPD 150 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~----------~~~~----~~~~~~~~v~~v~~~~~~~~~~~~--sg~~~ 150 (321)
.++.+++++++.+|++|+.++++||+..... .... ..+.+.+.+..++|+++++.++++ +++
T Consensus 38 ~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs-- 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE-- 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT--
T ss_pred CccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC--
Confidence 5788999999999999999999998753210 1100 111135579999999999988863 333
Q ss_pred CCCCCCcEEEEeCCCC--------cE---EEEEe-eCCceeEEEEeCC---eEEEEE-CCEEEEEEcCCcEEEEEEeccC
Q 020784 151 PQYPLNKVMIWDDHQS--------RC---IGELS-FRSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIA 214 (321)
Q Consensus 151 ~~~~d~~v~iWD~~~~--------~~---~~~~~-~~~~v~~v~~~~~---~~~~~~-~~~I~iwd~~~~~~~~~l~~~~ 214 (321)
.|++|+|||++++ +. +..+. +...|.+++|+++ .+++++ +++|++||+++++.+.....|.
T Consensus 116 ---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 116 ---YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ---TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ---CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 5799999998654 22 22222 3457999999975 355554 5799999999887766666655
Q ss_pred CCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceEEeecc-------ccceeEEEECCCCCEEEEEe-CCCc-----
Q 020784 215 NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH-------DSRIACFALTQDGQLLATSS-TKGT----- 281 (321)
Q Consensus 215 ~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H-------~~~V~~vafspdg~~las~S-~Dgt----- 281 (321)
..+..+++ ++++.+|+ +|+.||.|++||........+..| ...|.+++|++++.++++.+ .||.
T Consensus 193 ~~v~~v~w--spdg~~la-sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~ 269 (434)
T 2oit_A 193 VAVTSVCW--SPKGKQLA-VGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSP 269 (434)
T ss_dssp GCEEEEEE--CTTSSCEE-EEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCC
T ss_pred CceeEEEE--cCCCCEEE-EEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCC
Confidence 54444444 55667888 489999999999874444455444 33899999999998876543 3322
Q ss_pred EEEEEEcCCC
Q 020784 282 LVRIFNTLDG 291 (321)
Q Consensus 282 ~IrIWd~~tg 291 (321)
.+++|++.+.
T Consensus 270 ~v~i~~l~~~ 279 (434)
T 2oit_A 270 DVVMALLPKK 279 (434)
T ss_dssp EEEEEECCCT
T ss_pred ceEEEEeccC
Confidence 2889999865
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=4.3e-16 Score=140.06 Aligned_cols=211 Identities=8% Similarity=-0.014 Sum_probs=150.2
Q ss_pred EEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCC--ceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCC
Q 020784 90 HISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGG--GIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (321)
Q Consensus 90 ~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~ 166 (321)
.++++++++++++++. +.|.+||..+++....... .. ....++++++++.++++.. .++.|.+||..++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~~~v~~~------~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDKFGPGTAMMAPDNRTAYVLNN------HYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC--SSCCSSCEEEECTTSSEEEEEET------TTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec--CCCCCCceeEECCCCCEEEEEeC------CCCcEEEEeCCCC
Confidence 4568888998888876 5588999998877655554 33 4667788888887766653 3589999999999
Q ss_pred cEEEEEeeCC-------ceeEEEEeCC--eEEEEE-------------CCEEEEEEcCCc---EEEEEEeccCCCCceEE
Q 020784 167 RCIGELSFRS-------EVRSVKLRRD--RIIVVL-------------EQKIFVYNFADL---KLLHQIETIANPKGLCA 221 (321)
Q Consensus 167 ~~~~~~~~~~-------~v~~v~~~~~--~~~~~~-------------~~~I~iwd~~~~---~~~~~l~~~~~~~~~~~ 221 (321)
+.+..+.... .+..+.|+++ .++++. .+.|.+||+.++ +.+..+..+. ....++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~ 154 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QVYLMR 154 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-SCCCEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-ccccee
Confidence 8887776533 2778899876 455554 379999999874 3334444332 233445
Q ss_pred EeeCCCceEEEeecCCCCcEEEEeeCCcce-EEeecc-------------------------------------------
Q 020784 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMAH------------------------------------------- 257 (321)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~V~i~d~~~~~~-~~l~~H------------------------------------------- 257 (321)
+++ |+.+++ ++ +.|.+||..++.. ..+..+
T Consensus 155 ~s~--dg~l~~--~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 155 AAD--DGSLYV--AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp ECT--TSCEEE--ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred ECC--CCcEEE--cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 555 456444 23 3488898766543 233222
Q ss_pred -------------------------ccceeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeec
Q 020784 258 -------------------------DSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLS 311 (321)
Q Consensus 258 -------------------------~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d 311 (321)
...+.+++|+| +|++|+++ ++. |++||+.+++.+.++..+.....+.+++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~~~~~~~~~~s~d 305 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAANLDHTYYCVAFDKK 305 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEEECSSCCCEEEECSS
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEEcCCCCccceEECCC
Confidence 12456788889 99999988 778 99999999999998887777777889999
Q ss_pred CceEEEe
Q 020784 312 SAWLRVL 318 (321)
Q Consensus 312 ~~~la~~ 318 (321)
|++|+++
T Consensus 306 g~~l~~~ 312 (349)
T 1jmx_B 306 GDKLYLG 312 (349)
T ss_dssp SSCEEEE
T ss_pred CCEEEEe
Confidence 9998774
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=1.2e-16 Score=142.74 Aligned_cols=199 Identities=8% Similarity=0.015 Sum_probs=141.3
Q ss_pred CeEEEEEcCCCCEEEEEc-------------CCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCC
Q 020784 87 TLLHISFNQDHGCFAAGT-------------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~-------------~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~ 153 (321)
.+.+++|+|||++|+++. ++.+.+||+.+.+....... ...+..+.++++++.+++++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~------- 153 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGLG------- 153 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEES-------
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEeC-------
Confidence 566899999999988874 46688999988876555443 44566778899998887763
Q ss_pred CCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCCe--EEEEEC--C-----------------------EEEEEEcCCcEE
Q 020784 154 PLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR--IIVVLE--Q-----------------------KIFVYNFADLKL 206 (321)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~--~-----------------------~I~iwd~~~~~~ 206 (321)
+.|.+||..+++.+..+........+.|+++. +++... + .|.+||+.+++.
T Consensus 154 --~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 154 --RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp --SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred --CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 67999999999887776654311122344432 221111 1 589999998877
Q ss_pred EEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceE-EeeccccceeEEEECCCCCEEEEEeCCCcEEEE
Q 020784 207 LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (321)
Q Consensus 207 ~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~-~l~~H~~~V~~vafspdg~~las~S~Dgt~IrI 285 (321)
. .+...........+..++|+.++++ + ++.|.+||..++... .+. ....+.+++|+|+|++|++++.|+. |+|
T Consensus 232 ~-~~~~~~~~~~~~~~~~s~dg~~l~~-~--~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~-i~v 305 (337)
T 1pby_B 232 A-MREVRIMDVFYFSTAVNPAKTRAFG-A--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGD-LAA 305 (337)
T ss_dssp E-EEEEEECSSCEEEEEECTTSSEEEE-E--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSE-EEE
T ss_pred e-EeecCCCCCceeeEEECCCCCEEEE-e--CCeEEEEECCCCcCcceec-CCCceeeEEECCCCCEEEEEcCCCc-EEE
Confidence 5 4433222233444555566677775 3 689999999876644 443 3456899999999999999998999 999
Q ss_pred EEcCCCcEEEEEeCCCc
Q 020784 286 FNTLDGTLLQEECCPSI 302 (321)
Q Consensus 286 Wd~~tg~~i~~~~~g~~ 302 (321)
||+.+++.+.++..+..
T Consensus 306 ~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 306 YDAETLEKKGQVDLPGN 322 (337)
T ss_dssp EETTTCCEEEEEECGGG
T ss_pred EECcCCcEEEEEEcCCC
Confidence 99999999999876533
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=3.8e-15 Score=135.55 Aligned_cols=226 Identities=12% Similarity=0.062 Sum_probs=145.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC-----cEEEEEecCC--ceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCC
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDH-----GFRIYNCDPF--REIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~-----gv~vw~~~~~--~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d 155 (321)
+...+..++|+|||++|++++.+ .+.+|+++.. +........ +......+.+ +++.++++.. .+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~------~~ 119 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANY------SG 119 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEET------TT
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEEC------CC
Confidence 44567789999999999888773 5889998763 332222221 2233444454 7777777663 35
Q ss_pred CcEEEEeCCCCcEEE----EEee-----------CCceeEEEEeCCe--EEEEE--CCEEEEEEcCCcE-------EE--
Q 020784 156 NKVMIWDDHQSRCIG----ELSF-----------RSEVRSVKLRRDR--IIVVL--EQKIFVYNFADLK-------LL-- 207 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~----~~~~-----------~~~v~~v~~~~~~--~~~~~--~~~I~iwd~~~~~-------~~-- 207 (321)
++|.+||+.....+. .+.+ ...+.++.|+++. ++++. ++.|++|++.... +.
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec
Confidence 899999987543221 1111 1134778998864 55554 4699999886432 11
Q ss_pred ---EEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceE---Ee---eccccceeEEEECCCCCEEEEEeC
Q 020784 208 ---HQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK---FI---MAHDSRIACFALTQDGQLLATSST 278 (321)
Q Consensus 208 ---~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~---~l---~~H~~~V~~vafspdg~~las~S~ 278 (321)
..+... .......+.+++|+.++++++..++.|.+|++..+.+. .+ ..+...+..++|+|||++|+.+..
T Consensus 200 ~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 200 GTPEAFKVA-PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEEEECC-TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred ccccceecC-CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 122221 11223344555666766655667899999998765432 22 234456789999999998866655
Q ss_pred C--CcEEEEEEcC--CCc--EEEEEeCCCcceeEEEeecCceEEEee
Q 020784 279 K--GTLVRIFNTL--DGT--LLQEECCPSISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 279 D--gt~IrIWd~~--tg~--~i~~~~~g~~~~~~~~s~d~~~la~~~ 319 (321)
+ ++ |+||++. +|+ .+..+..+.....+.+++||+||+++.
T Consensus 279 ~~~~~-i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 279 LKADG-VAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp SSSCE-EEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEE
T ss_pred CCCCE-EEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEE
Confidence 4 77 9999995 566 455565555566778999999998864
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=2.5e-16 Score=156.00 Aligned_cols=221 Identities=12% Similarity=0.039 Sum_probs=155.5
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
..|.+++|+|| ++++.+.+..+++||+.+++...... +.+.+..++++++++.++++. +++|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~--~~~~~~~~~~SpdG~~la~~~--------~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFD--TNEETASLDFSPVGDRVAYVR--------NHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEEC--CTTCCTTCEECTTSSEEEEEE--------TTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEEccC--CcccccCCcCCCCCCEEEEEE--------CCeEEEEecCc
Confidence 47999999999 66766677889999998876543332 355677789999999998864 58999999988
Q ss_pred -----CcEEEEEeeCCc---------------eeEEEEeCCe--EEEEE-------------------------------
Q 020784 166 -----SRCIGELSFRSE---------------VRSVKLRRDR--IIVVL------------------------------- 192 (321)
Q Consensus 166 -----~~~~~~~~~~~~---------------v~~v~~~~~~--~~~~~------------------------------- 192 (321)
++.......... +.++.|+++. ++.+.
T Consensus 151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 776543333222 4788998864 55443
Q ss_pred --C-CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCC-----cEEEEeeCCc-ceEEeec--ccc--
Q 020784 193 --E-QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG-----QVRVEHYASK-RTKFIMA--HDS-- 259 (321)
Q Consensus 193 --~-~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg-----~V~i~d~~~~-~~~~l~~--H~~-- 259 (321)
. ..|++||+.+++.............+..+.+.+|+..|++ ++.++ .|.+||..++ ....+.. +..
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~-~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYV-AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEE-EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEE-EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 1 4799999998876544322222233445555667777775 34443 7888998877 5544432 222
Q ss_pred -ceeEEEECC--CCCEEEEEeCCCcEEEEEEcC-CCcEEEEEeCCCccee--EEEeecCceEEEee
Q 020784 260 -RIACFALTQ--DGQLLATSSTKGTLVRIFNTL-DGTLLQEECCPSISAQ--SGLWLSSAWLRVLR 319 (321)
Q Consensus 260 -~V~~vafsp--dg~~las~S~Dgt~IrIWd~~-tg~~i~~~~~g~~~~~--~~~s~d~~~la~~~ 319 (321)
.+.+++|+| ||++|++++.||. ++||++. +++.+..+..+..... ..+++||++|+++.
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEe
Confidence 357899999 9999999999999 9999987 7888888855443332 57889999887653
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.72 E-value=2.1e-16 Score=153.41 Aligned_cols=216 Identities=7% Similarity=-0.049 Sum_probs=141.9
Q ss_pred CCeEEEEEcCCCCEEEEEcC-Cc-EEEEEecCCceeEEeeeecC-CceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HG-FRIYNCDPFREIFRRDFERG-GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~g-v~vw~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
.+|++++|+|||++||.+++ ++ ++||+++.++.. .... +. ..+..+.|+++ ..+++...+. .+...+||.
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~-~~~~~~~~~~~spd-~~l~~~~~~~----g~~~~~l~~ 94 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNR-EPINSVLDPHYGVG-RVILVRDVSK----GAEQHALFK 94 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCS-SCCSEECEECTTCS-EEEEEEECST----TSCCEEEEE
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeec-ccccccccccCCCC-eEEEEeccCC----CCcceEEEE
Confidence 47999999999999998875 54 779999765542 2221 22 35666666666 4444444211 134456655
Q ss_pred CCC---CcEEEEEeeCC--ceeEEEEeCCeEEEE--ECCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeec
Q 020784 163 DHQ---SRCIGELSFRS--EVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 163 ~~~---~~~~~~~~~~~--~v~~v~~~~~~~~~~--~~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sG 235 (321)
+.. +... .+.... .+.++.++++.++.+ ..+.+.+||+.+++..+....+. ...++++ |+..+++ +
T Consensus 95 ~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~sp--DG~~la~-~ 167 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDI--RGDLIAG-L 167 (582)
T ss_dssp EETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEE--ETTEEEE-E
T ss_pred EeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECC--CCCEEEE-E
Confidence 432 2222 332222 234455556555444 34566799999887655444332 4555666 5577774 3
Q ss_pred CCC----CcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCC--cEEEEEEcCCCcEEEEEeCCCcc--eeEE
Q 020784 236 LQK----GQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG--TLVRIFNTLDGTLLQEECCPSIS--AQSG 307 (321)
Q Consensus 236 s~d----g~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dg--t~IrIWd~~tg~~i~~~~~g~~~--~~~~ 307 (321)
+.+ +.|++||..++....+..|...+..++|||||++||+++.|+ . |++||+.+|++. .+ .++.. ....
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~-~~-~~~~~~~~~~~ 244 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE-DL-ELPSKDFSSYR 244 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE-EC-CCSCSHHHHHC
T ss_pred EEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE-Ec-cCCCcChhhhh
Confidence 434 578889988888888999999999999999999999888888 7 999999999987 44 34332 1234
Q ss_pred --------EeecCceEEEe
Q 020784 308 --------LWLSSAWLRVL 318 (321)
Q Consensus 308 --------~s~d~~~la~~ 318 (321)
+++||+.++.+
T Consensus 245 ~~~~~~~~~spdg~~~~~~ 263 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVA 263 (582)
T ss_dssp CSEEEEEEECTTSCEEEEE
T ss_pred hccccceeEcCCCcEEEEE
Confidence 89999555544
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=4.7e-15 Score=132.73 Aligned_cols=216 Identities=9% Similarity=0.079 Sum_probs=141.9
Q ss_pred CeEEEEEcCCCCEEEEEcC-Cc-EEEEEecCC---ceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEE
Q 020784 87 TLLHISFNQDHGCFAAGTD-HG-FRIYNCDPF---REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~-~g-v~vw~~~~~---~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iW 161 (321)
.+.+++|+|||++|++++. ++ +.+|++..+ +...... ....+..++++++++.+++++. .++.|++|
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~------~~~~v~~~ 156 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNRTLWVPAL------KQDRICLF 156 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEG------GGTEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCCEEEEecC------CCCEEEEE
Confidence 6889999999998876654 44 889999532 2222222 2345777889999987776652 25889999
Q ss_pred eCCC-CcEEE----EEee--CCceeEEEEeCCe--EEEEE--CCEEEEEEcCC--cEE--EEEEeccC----CCCceEEE
Q 020784 162 DDHQ-SRCIG----ELSF--RSEVRSVKLRRDR--IIVVL--EQKIFVYNFAD--LKL--LHQIETIA----NPKGLCAV 222 (321)
Q Consensus 162 D~~~-~~~~~----~~~~--~~~v~~v~~~~~~--~~~~~--~~~I~iwd~~~--~~~--~~~l~~~~----~~~~~~~~ 222 (321)
|+.+ ++... .+.. ...+..+.|+++. ++++. ++.|++|++.. ++. +..+.... .......+
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred EecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 9987 65432 2222 2367889998764 55554 46999999943 332 33333211 11233345
Q ss_pred eeCCCceEEEeecCCCCcEEEEeeC--Ccc---eEEeeccccceeEEEECCCCCEEEEEe-CCCcEEEEE--EcCCCc--
Q 020784 223 SQGVGSLVLVCPGLQKGQVRVEHYA--SKR---TKFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIF--NTLDGT-- 292 (321)
Q Consensus 223 s~~~d~~~la~sGs~dg~V~i~d~~--~~~---~~~l~~H~~~V~~vafspdg~~las~S-~Dgt~IrIW--d~~tg~-- 292 (321)
..++++..|++++..++.|.+|++. .+. +..+..+.. +.+++|+|+|++|++++ .|+. |+|| |..+|+
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~-v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHH-ISVYEIVGEQGLLH 314 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCE-EEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCe-EEEEEEcCCCceee
Confidence 5566666666567789999999987 222 224444444 99999999999888887 5777 9999 555774
Q ss_pred EEEEEeCCCcceeEEEeecC
Q 020784 293 LLQEECCPSISAQSGLWLSS 312 (321)
Q Consensus 293 ~i~~~~~g~~~~~~~~s~d~ 312 (321)
.+.++..+.....+.+..+.
T Consensus 315 ~~~~~~~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 315 EKGRYAVGQGPMWVVVNAHE 334 (343)
T ss_dssp EEEEEECSSSCCEEEEEEEC
T ss_pred EccccccCCCCeeEEEEccc
Confidence 45666666555566665543
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.72 E-value=1e-15 Score=137.63 Aligned_cols=209 Identities=9% Similarity=0.018 Sum_probs=144.2
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCceeEEeeeec-----CCceEEEEEecCCCeEEEEeCC-----CCCCCC
Q 020784 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFER-----GGGIGVVEMLFRCNILALVGGG-----PDPQYP 154 (321)
Q Consensus 87 ~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~~~~~sg~-----~~~~~~ 154 (321)
.+..++|+|||++++ ++.. +.|.+||+.+++........+ ...+..+.++++++.++++... +.....
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 467899999998665 4444 458899999887765554311 1125667888999888877621 000001
Q ss_pred CCcEEEEeCCCCc---EEEEEeeCCceeEEEEeCCeEEEEECCEEEEEEcCCcEEEEEEeccCCC---------------
Q 020784 155 LNKVMIWDDHQSR---CIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIANP--------------- 216 (321)
Q Consensus 155 d~~v~iWD~~~~~---~~~~~~~~~~v~~v~~~~~~~~~~~~~~I~iwd~~~~~~~~~l~~~~~~--------------- 216 (321)
++.|.+||+.+++ .+..+.....+.++.|+++..+.+.++.|++||+.+++.+..+..+...
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 203 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred CCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCccceeeecC
Confidence 3789999998844 3345555567888899876534445667999999998888777543200
Q ss_pred ---------------------------------------------------CceEEEeeCC-CceEEEeecCCCCcEEEE
Q 020784 217 ---------------------------------------------------KGLCAVSQGV-GSLVLVCPGLQKGQVRVE 244 (321)
Q Consensus 217 ---------------------------------------------------~~~~~~s~~~-d~~~la~sGs~dg~V~i~ 244 (321)
.....+..++ |+.++++ + ++.|.+|
T Consensus 204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~-~--~~~v~~~ 280 (349)
T 1jmx_B 204 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG-V--LNRLAKY 280 (349)
T ss_dssp CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE-E--ESEEEEE
T ss_pred CCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEE-E--cCeEEEE
Confidence 0011222335 6666664 3 7899999
Q ss_pred eeCCcceE-EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 245 HYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 245 d~~~~~~~-~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
|+.++... .+. +...+.+++|+|+|++|++++.+++ |+|||+.+++++.++..+
T Consensus 281 d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~-v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 281 DLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFND-LAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp ETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSE-EEEEETTTTEEEEEEECS
T ss_pred ECccCeEEEEEc-CCCCccceEECCCCCEEEEecCCCe-EEEEeccccceeeeeecC
Confidence 99877654 443 4456889999999998888888988 999999999999988765
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.72 E-value=3.7e-16 Score=155.54 Aligned_cols=229 Identities=7% Similarity=-0.063 Sum_probs=157.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCc----------------eEEEEEecCCCeEEEEe
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGG----------------IGVVEMLFRCNILALVG 146 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~----------------v~~v~~~~~~~~~~~~s 146 (321)
.+...+.+++|+|||++||.++++.|.+||+.+++....... +... +..+.|+++++.+++++
T Consensus 149 ~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 149 HGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTAD-GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCC-CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred cCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccC-CccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 345689999999999999999998899999988764322211 1111 35688999999998876
Q ss_pred CCCCC--------------------------CCCCCcEEEEeCCC-CcEEEEEe---eCCceeEEEEeCC--eEEEEE--
Q 020784 147 GGPDP--------------------------QYPLNKVMIWDDHQ-SRCIGELS---FRSEVRSVKLRRD--RIIVVL-- 192 (321)
Q Consensus 147 g~~~~--------------------------~~~d~~v~iWD~~~-~~~~~~~~---~~~~v~~v~~~~~--~~~~~~-- 192 (321)
..... ......|.+||+.+ ++...... +...+..+.| ++ .+++..
T Consensus 228 ~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~ 306 (741)
T 2ecf_A 228 IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQS 306 (741)
T ss_dssp EECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEE
T ss_pred EcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEec
Confidence 22100 00011788999988 77554331 3346788888 76 344432
Q ss_pred ----CCEEEEEEcCCcEEEEEEeccCC----CCceEEEeeCCCceEEEeecCCCCcEEEEeeC--CcceEEeecccccee
Q 020784 193 ----EQKIFVYNFADLKLLHQIETIAN----PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA--SKRTKFIMAHDSRIA 262 (321)
Q Consensus 193 ----~~~I~iwd~~~~~~~~~l~~~~~----~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~--~~~~~~l~~H~~~V~ 262 (321)
+..|++||+.+++....+..+.. ....+++++ |+.+++ +++.+|.++||.+. .+ ...+..|...|.
T Consensus 307 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp--dg~~~~-~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~ 382 (741)
T 2ecf_A 307 RDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD--DGSILW-SSERTGFQHLYRIDSKGK-AAALTHGNWSVD 382 (741)
T ss_dssp TTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT--TSCEEE-EECTTSSCEEEEECSSSC-EEESCCSSSCEE
T ss_pred ccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC--CCeEEE-EecCCCccEEEEEcCCCC-eeeeeecceEEE
Confidence 24899999999888777665432 223456665 446665 47788988887654 44 778888988898
Q ss_pred EE-EECCCCCEEE-EEeCCC--cEEEEEEcCC-CcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 263 CF-ALTQDGQLLA-TSSTKG--TLVRIFNTLD-GTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 263 ~v-afspdg~~la-s~S~Dg--t~IrIWd~~t-g~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
++ +|+|||++|+ +++.|+ + ++||++.. |+....+........+.+++||++|++.
T Consensus 383 ~~~~~s~dg~~l~~~~~~~~~~~-~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 383 ELLAVDEKAGLAYFRAGIESARE-SQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDS 442 (741)
T ss_dssp EEEEEETTTTEEEEEECSSCTTC-BEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEE
T ss_pred eEeEEeCCCCEEEEEEeCCCCce-EEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEE
Confidence 88 5999998775 455555 7 99999974 6666666543334456889999998875
No 150
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=7.5e-15 Score=134.36 Aligned_cols=232 Identities=10% Similarity=0.065 Sum_probs=144.8
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEec-CCceeEEeeeecCCceEEEEEecCCCeEEE-EeC-CCCCCC------CCCc
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCD-PFREIFRRDFERGGGIGVVEMLFRCNILAL-VGG-GPDPQY------PLNK 157 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~-~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~sg-~~~~~~------~d~~ 157 (321)
.+..++|+|||++|++++.+.+.+|+++ +++..........+....+.++++++.+.+ +.. +....+ .+++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~ 120 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY 120 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE
T ss_pred CCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCce
Confidence 5678999999999988877788999997 665433222210122334566777775332 221 000000 2588
Q ss_pred EEEEeCC-CCcEEEEEe-----eCCceeEEEEeCCe--EEEEE--CCEEEEEEcC-CcEEE--EEEeccCCCCceEEEee
Q 020784 158 VMIWDDH-QSRCIGELS-----FRSEVRSVKLRRDR--IIVVL--EQKIFVYNFA-DLKLL--HQIETIANPKGLCAVSQ 224 (321)
Q Consensus 158 v~iWD~~-~~~~~~~~~-----~~~~v~~v~~~~~~--~~~~~--~~~I~iwd~~-~~~~~--~~l~~~~~~~~~~~~s~ 224 (321)
+++|++. +++....+. ....+.++.|+++. ++++. ++.|++|++. ++++. ..+...........+..
T Consensus 121 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 121 GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE
T ss_pred EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEE
Confidence 9999997 466554443 23478899999864 55553 3699999998 66653 33332111123444455
Q ss_pred CCCceEEEeecCCCCcEEEEeeC--CcceE-------Eee----cccc------ceeEEE-ECCCCCEEEEEeCCC----
Q 020784 225 GVGSLVLVCPGLQKGQVRVEHYA--SKRTK-------FIM----AHDS------RIACFA-LTQDGQLLATSSTKG---- 280 (321)
Q Consensus 225 ~~d~~~la~sGs~dg~V~i~d~~--~~~~~-------~l~----~H~~------~V~~va-fspdg~~las~S~Dg---- 280 (321)
++|+.++++.+..++.|.+|++. ++.+. .+. +|.. .+..++ |+|||++|++++.+.
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~ 280 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL 280 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCC
Confidence 55667666545667899998764 33321 121 2333 589999 999999887765433
Q ss_pred --cEEEEEEcC-CCcEEEE---Ee-CCCcceeEEEee---cCceEEEee
Q 020784 281 --TLVRIFNTL-DGTLLQE---EC-CPSISAQSGLWL---SSAWLRVLR 319 (321)
Q Consensus 281 --t~IrIWd~~-tg~~i~~---~~-~g~~~~~~~~s~---d~~~la~~~ 319 (321)
+ |+||++. +|++... .. .+.....+.+++ ||++|+++.
T Consensus 281 ~~~-i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 281 QGY-IAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp CCE-EEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred CCe-EEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 6 9999996 7876542 22 233345568888 899998863
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=1.2e-15 Score=151.23 Aligned_cols=232 Identities=10% Similarity=0.008 Sum_probs=155.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEEecC-----CceeEEeeeecCCc--------------eEEEEEecCCCeEEE
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDHGFRIYNCDP-----FREIFRRDFERGGG--------------IGVVEMLFRCNILAL 144 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~-----~~~~~~~~~~~~~~--------------v~~v~~~~~~~~~~~ 144 (321)
+...+.+++|+|||++||.+.+..|.+|++.+ ++....... +... +..+.|+++++.+++
T Consensus 119 ~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~-~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTID-GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSC-CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred CcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccC-CCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence 44568889999999999998888899999988 654322221 1222 367889999999988
Q ss_pred EeCCCC--------------------------CCCCCCcEEEEeCCCCcEEEEEe---eCCceeEEEEeCCe--EEEE-E
Q 020784 145 VGGGPD--------------------------PQYPLNKVMIWDDHQSRCIGELS---FRSEVRSVKLRRDR--IIVV-L 192 (321)
Q Consensus 145 ~sg~~~--------------------------~~~~d~~v~iWD~~~~~~~~~~~---~~~~v~~v~~~~~~--~~~~-~ 192 (321)
++-... ....+..|++||+.+++...... ....+..+.|+++. ++++ .
T Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 277 (706)
T 2z3z_A 198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV 277 (706)
T ss_dssp EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence 761000 00024789999999887654332 22468899999864 4443 3
Q ss_pred CC-----EEEEEEcCCcEEEEEEec--cCCC---CceEEEeeCCCceEEEeecCCCCcEEEEeeC--CcceEEeeccccc
Q 020784 193 EQ-----KIFVYNFADLKLLHQIET--IANP---KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA--SKRTKFIMAHDSR 260 (321)
Q Consensus 193 ~~-----~I~iwd~~~~~~~~~l~~--~~~~---~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~--~~~~~~l~~H~~~ 260 (321)
+. .|++||+.+++....+.. +... ...+++++..|+.+++ +++.+|.++||++. .+.+..+..|...
T Consensus 278 ~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~-~~~~~g~~~l~~~~~~~~~~~~l~~~~~~ 356 (706)
T 2z3z_A 278 NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIW-QSRRDGWNHLYLYDTTGRLIRQVTKGEWE 356 (706)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEE-EECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred CCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEE-EEccCCccEEEEEECCCCEEEecCCCCeE
Confidence 33 899999998844444432 2111 2335665511557776 47788999998764 4556788888888
Q ss_pred eeE-EEECCCCCEEEEEeCC-C---cEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 261 IAC-FALTQDGQLLATSSTK-G---TLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 261 V~~-vafspdg~~las~S~D-g---t~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
|.+ ++|+|+|+.|+.++.+ + ..|.+||+.+++ ...+..........+++||++|++.
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSEEEEEECTTSSEEEEE
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCceEEEEECCCCCEEEEE
Confidence 887 8999999877665544 3 137778888877 3444333334456889999998775
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=3.3e-15 Score=130.33 Aligned_cols=199 Identities=9% Similarity=-0.039 Sum_probs=141.6
Q ss_pred CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC-CcEEEEEeeC--CceeEEE
Q 020784 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCIGELSFR--SEVRSVK 182 (321)
Q Consensus 106 ~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~-~~~~~~~~~~--~~v~~v~ 182 (321)
..+++||+.+.+...... |.+.+..++++++++.+++.+ ++.|++||+.+ ++.......+ ..+.++.
T Consensus 22 ~~i~~~d~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQ--TPELFEAPNWSPDGKYLLLNS--------EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp EEEEEEETTTTEEEEEEE--ESSCCEEEEECTTSSEEEEEE--------TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred eeEEEEeCCCCceeeecc--CCcceEeeEECCCCCEEEEEc--------CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 348899998887654443 578899999999999888865 47899999998 8766555443 4678899
Q ss_pred EeCCe--EEEEEC-----CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEee--CCcceEE
Q 020784 183 LRRDR--IIVVLE-----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY--ASKRTKF 253 (321)
Q Consensus 183 ~~~~~--~~~~~~-----~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~--~~~~~~~ 253 (321)
|+++. ++.+.. ..|..|++.+++ ...+..+. . ...+...+|+..+++++..++.++||++ ..+....
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-P--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-S--EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-C--ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 98763 555551 255555655554 33443332 2 4444555666777766788899999875 3455677
Q ss_pred eeccccceeEEEECCCCCEEEEEe-CCCcEEEEEEcC-CCcEEEEEeCCCc-ceeEEEeecCceEEEee
Q 020784 254 IMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTL-DGTLLQEECCPSI-SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 254 l~~H~~~V~~vafspdg~~las~S-~Dgt~IrIWd~~-tg~~i~~~~~g~~-~~~~~~s~d~~~la~~~ 319 (321)
+..|...+.+++|+|+|++|+.++ .|+. ++||++. .+..+..+..... .....+++||++|+++.
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEE
Confidence 888999999999999999888766 4888 9999986 5666666643322 22347789999998764
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.68 E-value=1.9e-15 Score=156.60 Aligned_cols=217 Identities=10% Similarity=0.068 Sum_probs=156.8
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeee----------ecCCceEEEEEe-cCCCeEEEEeCCCCCCCCC
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDF----------ERGGGIGVVEML-FRCNILALVGGGPDPQYPL 155 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~----------~~~~~v~~v~~~-~~~~~~~~~sg~~~~~~~d 155 (321)
.+.+.+|+|||++|+.+.+..+.+|+.+..... .... .|.+.+..+.++ +++..+++++ +
T Consensus 246 ~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--------~ 316 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--------R 316 (1045)
T ss_dssp SSCEEEEEESSSCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--------T
T ss_pred CcceeeEcCCCCEEEEEeCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE--------c
Confidence 466789999999999998888999998543332 2211 012257888999 9999888877 4
Q ss_pred CcEEEEeCCCCcEEEEEeeCC-ceeEEEEeCCe--EEEEEC-CEEE-EEEcCCcEEEEEEeccCCCCceEEEeeCCCceE
Q 020784 156 NKVMIWDDHQSRCIGELSFRS-EVRSVKLRRDR--IIVVLE-QKIF-VYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~~~~-~v~~v~~~~~~--~~~~~~-~~I~-iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
+.|.+||...+.......+.. .+..+.|+ +. ++.+.+ ..+. +||+.+++.. .+..+.. .+..+.+.+|+..
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~--~~~~~~~SpDG~~ 392 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLG--NVFAMGVDRNGKF 392 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCC--SEEEEEECTTSSE
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCcc--ceeeeEECCCCCE
Confidence 789999998887654333344 67888888 64 444454 4777 8898776643 3333333 3445555667788
Q ss_pred EEeecCCCCcEEEEeeCCcceE-EeeccccceeEEEECCCCCEEEEEeCCC----------cEEEEEEcCCCcEEEEEeC
Q 020784 231 LVCPGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKG----------TLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~~~~~~-~l~~H~~~V~~vafspdg~~las~S~Dg----------t~IrIWd~~tg~~i~~~~~ 299 (321)
|++ ++.++.|++||+.++... .+.+|...|.+++|||||++||+++.++ + |++||+.+++ +..+..
T Consensus 393 la~-~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~-i~l~d~~~g~-~~~l~~ 469 (1045)
T 1k32_A 393 AVV-ANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA-IHVYDMEGRK-IFAATT 469 (1045)
T ss_dssp EEE-EETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE-EEEEETTTTE-EEECSC
T ss_pred EEE-ECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCe-EEEEECCCCc-EEEeeC
Confidence 885 778899999999887755 4558999999999999999999988755 6 9999999988 455533
Q ss_pred CCc-ceeEEEeecCceEEEee
Q 020784 300 PSI-SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 300 g~~-~~~~~~s~d~~~la~~~ 319 (321)
... .....+++||++|+++.
T Consensus 470 ~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 470 ENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp SSSBEEEEEECTTSCEEEEEE
T ss_pred CCcccCCceEcCCCCEEEEEe
Confidence 222 23457899999998754
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.67 E-value=1.3e-13 Score=124.63 Aligned_cols=204 Identities=11% Similarity=0.113 Sum_probs=134.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEc-C-CcEEEEEecCCc-eeEEeeeecC----------CceEEEEEecCCCeEEEEeCCCC
Q 020784 84 PPPTLLHISFNQDHGCFAAGT-D-HGFRIYNCDPFR-EIFRRDFERG----------GGIGVVEMLFRCNILALVGGGPD 150 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~-~-~gv~vw~~~~~~-~~~~~~~~~~----------~~v~~v~~~~~~~~~~~~sg~~~ 150 (321)
+...+..++|+|||++|++++ . +.+.+|+++..+ ......+.+. ..+..+.++++++ ++++..
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~--- 159 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL--- 159 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET---
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC---
Confidence 345788999999999888776 4 448899996432 2212222111 1366788999998 544442
Q ss_pred CCCCCCcEEEEeCC-CCcEEE--EEee--CCceeEEEEeCCe--EEEEE--CCEEEEEEcCC--cEE--EEEEeccCCC-
Q 020784 151 PQYPLNKVMIWDDH-QSRCIG--ELSF--RSEVRSVKLRRDR--IIVVL--EQKIFVYNFAD--LKL--LHQIETIANP- 216 (321)
Q Consensus 151 ~~~~d~~v~iWD~~-~~~~~~--~~~~--~~~v~~v~~~~~~--~~~~~--~~~I~iwd~~~--~~~--~~~l~~~~~~- 216 (321)
.++.|++||+. +++... .+.. ...+..+.|+++. ++++. ++.|++|++.. ++. +..+......
T Consensus 160 ---~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 160 ---GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp ---TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred ---CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 35789999998 555432 2222 2257789999864 55554 36999999863 543 3333332211
Q ss_pred ---CceEEEeeCCCceEEEeecCCCCcEEEEeeCCc-c---eEEeeccccceeEEEECCCCCEEEEEeCC-CcEEEEE--
Q 020784 217 ---KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK-R---TKFIMAHDSRIACFALTQDGQLLATSSTK-GTLVRIF-- 286 (321)
Q Consensus 217 ---~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~-~---~~~l~~H~~~V~~vafspdg~~las~S~D-gt~IrIW-- 286 (321)
.....+..++|+.+|++++..++.|.+|++... . +..+..|...++.++|+|||++|++++.+ ++ |+||
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~ 315 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN-ATLYAR 315 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE-EEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc-EEEEEE
Confidence 224455556677776555777899999998622 2 33556677789999999999988888765 66 9999
Q ss_pred EcCCCcEEE
Q 020784 287 NTLDGTLLQ 295 (321)
Q Consensus 287 d~~tg~~i~ 295 (321)
|..+|++..
T Consensus 316 d~~tg~l~~ 324 (347)
T 3hfq_A 316 DLTSGKLSL 324 (347)
T ss_dssp CTTTCCEEE
T ss_pred eCCCCeEEe
Confidence 666788763
No 155
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.66 E-value=1.9e-15 Score=142.00 Aligned_cols=159 Identities=9% Similarity=0.064 Sum_probs=113.1
Q ss_pred CceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCC-----------cE-----EEEEeeCCceeEEEEeCCe--EE
Q 020784 128 GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS-----------RC-----IGELSFRSEVRSVKLRRDR--II 189 (321)
Q Consensus 128 ~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~-----------~~-----~~~~~~~~~v~~v~~~~~~--~~ 189 (321)
..+..++++.....+++++ .++ ++||+.... .. ...+.+...|.+++|+++. ++
T Consensus 37 ~~~n~lavs~~~~~l~~~~-------~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~la 108 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGG-------ASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLS 108 (434)
T ss_dssp SCCBCEEEETTTTEEEEEE-------TTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEE
T ss_pred CCccEEEEecCCCEEEEEC-------CCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEE
Confidence 3467778888888887766 334 899874210 11 1223345579999999864 44
Q ss_pred EE--E---CCEEEEEEcCCc--------EE---EEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eE
Q 020784 190 VV--L---EQKIFVYNFADL--------KL---LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TK 252 (321)
Q Consensus 190 ~~--~---~~~I~iwd~~~~--------~~---~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~ 252 (321)
++ + ++.|++||+.++ +. ++.+.+|...+..++++++. +.+++ +|+.||+|++||+..+. ..
T Consensus 109 v~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~la-s~s~Dg~v~iwD~~~~~~~~ 186 (434)
T 2oit_A 109 ACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-PSMVA-VCLADGSIAVLQVTETVKVC 186 (434)
T ss_dssp EEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-TTEEE-EEETTSCEEEEEESSSEEEE
T ss_pred EEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-CCEEE-EEECCCeEEEEEcCCCccee
Confidence 31 2 469999998654 22 33444565555555665542 46676 58999999999998764 34
Q ss_pred EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 253 FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 253 ~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
...+|...|++++|+|+|++||+|+.||+ |+|||++ ++...++.
T Consensus 187 ~~~~~~~~v~~v~wspdg~~lasgs~dg~-v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 187 ATLPSTVAVTSVCWSPKGKQLAVGKQNGT-VVQYLPT-LQEKKVIP 230 (434)
T ss_dssp EEECGGGCEEEEEECTTSSCEEEEETTSC-EEEECTT-CCEEEEEC
T ss_pred eccCCCCceeEEEEcCCCCEEEEEcCCCc-EEEEccC-Cccccccc
Confidence 56779999999999999999999999999 9999999 77766664
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.66 E-value=2.4e-14 Score=148.37 Aligned_cols=221 Identities=7% Similarity=0.044 Sum_probs=159.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCC-cEEEEEecCC-ceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPF-REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~~-gv~vw~~~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
..|...|.++.|++| .++++++.+ .++||.++.. +....... ...+....+++++..+++.. ++.|.
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~--~~~~~~~~~SpDG~~la~~~--------~~~i~ 268 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTS--FTDYYPRHLNTDGRRILFSK--------GGSIY 268 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCC--CCSSCEEEEEESSSCEEEEE--------TTEEE
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecC--CCCcceeeEcCCCCEEEEEe--------CCEEE
Confidence 457789999999998 555566654 4789987652 22222221 23455668899999888765 58899
Q ss_pred EEeCCCCcEEEEEeeC------------CceeEEEEe-CCe--EEEEECCEEEEEEcCCcEEEEEEeccCCCCceEEEee
Q 020784 160 IWDDHQSRCIGELSFR------------SEVRSVKLR-RDR--IIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~------------~~v~~v~~~-~~~--~~~~~~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~ 224 (321)
+||...++.. .+..+ ..+.++.|+ ++. ++.+..+.|++|++..++... +..+.. ..+..+.+
T Consensus 269 ~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~~~~~-~~~~~~~~ 345 (1045)
T 1k32_A 269 IFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VPEPLR-IRYVRRGG 345 (1045)
T ss_dssp EECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CSCCSC-EEEEEECS
T ss_pred EecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-ccCCCc-ceEEeeeE
Confidence 9999554443 44332 258899999 864 666678899999998776543 433322 13445555
Q ss_pred CCCceEEEeecCCCCcEE-EEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCc-
Q 020784 225 GVGSLVLVCPGLQKGQVR-VEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSI- 302 (321)
Q Consensus 225 ~~d~~~la~sGs~dg~V~-i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~- 302 (321)
. |+..+++ ++.++.+. +|+...+....+.+|...+.+++|||||++||+++.|++ |++||+.+|++...+.....
T Consensus 346 s-dg~~l~~-~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~-v~~~d~~tg~~~~~~~~~~~~ 422 (1045)
T 1k32_A 346 D-TKVAFIH-GTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE-IMTVDLETGKPTVIERSREAM 422 (1045)
T ss_dssp S-SEEEEEE-EETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEECSSSC
T ss_pred c-CCCeEEE-EECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCe-EEEEECCCCceEEeccCCCCC
Confidence 6 7777775 44477788 889887777777788899999999999999999999999 99999999998776643222
Q ss_pred ceeEEEeecCceEEEee
Q 020784 303 SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 303 ~~~~~~s~d~~~la~~~ 319 (321)
...+.+++||++|+++.
T Consensus 423 v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp CCCEEECTTSCEEEEEE
T ss_pred ccceEECCCCCeEEEEe
Confidence 24568899999998764
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.65 E-value=2.9e-15 Score=148.55 Aligned_cols=231 Identities=10% Similarity=-0.033 Sum_probs=150.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCce------------------EEEEEecCCCeEEEE
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI------------------GVVEMLFRCNILALV 145 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v------------------~~v~~~~~~~~~~~~ 145 (321)
+...|.+++|||||++||.++++.+.+|++.+++....... +...+ ..+.|+++++.++++
T Consensus 112 ~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~ 190 (723)
T 1xfd_A 112 SNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA 190 (723)
T ss_dssp CSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred ccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecC-CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEE
Confidence 33458899999999999999998899999988765432221 12222 678999999999887
Q ss_pred eCCCCC---------------------------CCCCCcEEEEeCCCCcEEEEEee-------CCceeEEEEeCCeEEE-
Q 020784 146 GGGPDP---------------------------QYPLNKVMIWDDHQSRCIGELSF-------RSEVRSVKLRRDRIIV- 190 (321)
Q Consensus 146 sg~~~~---------------------------~~~d~~v~iWD~~~~~~~~~~~~-------~~~v~~v~~~~~~~~~- 190 (321)
+..... ...+.+|++||+.+++....+.. ...+..+.|+++.-.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~ 270 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAV 270 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEE
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEE
Confidence 632100 00123899999998876555543 2467889999886333
Q ss_pred -EEC-----CEEEEEEcCCcEEEEEEecc-CCCCc----eEEEeeCCCceEEEee-cCCCC----c--EEEEe-eCCcc-
Q 020784 191 -VLE-----QKIFVYNFADLKLLHQIETI-ANPKG----LCAVSQGVGSLVLVCP-GLQKG----Q--VRVEH-YASKR- 250 (321)
Q Consensus 191 -~~~-----~~I~iwd~~~~~~~~~l~~~-~~~~~----~~~~s~~~d~~~la~s-Gs~dg----~--V~i~d-~~~~~- 250 (321)
... ..|++||+.+++....+..+ ...+. ..+++++ +..|++. +..+| . |.+|+ ...+.
T Consensus 271 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 348 (723)
T 1xfd_A 271 TWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD--GRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN 348 (723)
T ss_dssp EEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT--SCSEEEEEEECCSSSSCEEEEEEECSSCCSSS
T ss_pred EEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC--CCeEEEEEecccCCCcceeEEEEEeccCCCCc
Confidence 221 37999999988877666443 22222 4566655 4545443 55666 4 55576 34444
Q ss_pred --eEEeeccccceeE-EEECCCCCEEEEEeCC---CcEEEEEEcCCCc--EEEEEeC----CCcceeEEEeecCceEEEe
Q 020784 251 --TKFIMAHDSRIAC-FALTQDGQLLATSSTK---GTLVRIFNTLDGT--LLQEECC----PSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 251 --~~~l~~H~~~V~~-vafspdg~~las~S~D---gt~IrIWd~~tg~--~i~~~~~----g~~~~~~~~s~d~~~la~~ 318 (321)
...+..+...+.. ++|+|||++|+..+.+ ++ ++||++.... ....+.. +.......+++||++|++.
T Consensus 349 ~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 349 DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRR-RQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTC-CEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcc-eEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 5566654455554 6999999999876665 67 9999987532 3333432 1223456889999999874
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=1.9e-16 Score=157.30 Aligned_cols=227 Identities=7% Similarity=-0.024 Sum_probs=149.2
Q ss_pred EEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCC---ceEEEEEecCCCeEEEEeCCCC--CCCCCCcEEEEeCC
Q 020784 90 HISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGG---GIGVVEMLFRCNILALVGGGPD--PQYPLNKVMIWDDH 164 (321)
Q Consensus 90 ~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~~~sg~~~--~~~~d~~v~iWD~~ 164 (321)
+++|+|||++++++.++.+++||..+++....... +.. .+..++++++++.+++++.... ....+++|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 68999999888877767799999998876544332 111 3778899999999988873100 00015899999999
Q ss_pred CCcEEEEEeeCCceeEEEEeCC--eEEEEECCEEEEEEcCCcEEEEEEeccCCCC----------------ceEEEeeCC
Q 020784 165 QSRCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIETIANPK----------------GLCAVSQGV 226 (321)
Q Consensus 165 ~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~~I~iwd~~~~~~~~~l~~~~~~~----------------~~~~~s~~~ 226 (321)
+++.+........+..+.|+++ .++.+.++.|++||+.+++..+......... ...++.+.+
T Consensus 99 ~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 99 NGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp TTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred CCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 9876321233456888999986 4677778999999998877643221111110 001344455
Q ss_pred CceEEEeecCCC-C---------------------------------cEEEEeeCCcce---------EEeeccccceeE
Q 020784 227 GSLVLVCPGLQK-G---------------------------------QVRVEHYASKRT---------KFIMAHDSRIAC 263 (321)
Q Consensus 227 d~~~la~sGs~d-g---------------------------------~V~i~d~~~~~~---------~~l~~H~~~V~~ 263 (321)
|+..||+ ++.| + .|++||..++.. ..+.+|...+.+
T Consensus 179 DG~~la~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (719)
T 1z68_A 179 NGKFLAY-AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSW 257 (719)
T ss_dssp TSSEEEE-EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEE
T ss_pred CCCEEEE-EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEE
Confidence 6678876 3322 1 677899887653 123468889999
Q ss_pred EEECCCCCEEEEEeCCC---cEEEEEE----cCCCcEEEEEe---CCCcc--e-----eEEEeecCceEEEe
Q 020784 264 FALTQDGQLLATSSTKG---TLVRIFN----TLDGTLLQEEC---CPSIS--A-----QSGLWLSSAWLRVL 318 (321)
Q Consensus 264 vafspdg~~las~S~Dg---t~IrIWd----~~tg~~i~~~~---~g~~~--~-----~~~~s~d~~~la~~ 318 (321)
++|||||+++++....+ ..|.+|| +.+|++...+. .++.. . ...+++||++|+++
T Consensus 258 ~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 258 LTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp EEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred eEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 99999998887754221 1288899 88887654331 23322 1 45789999977663
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.64 E-value=7.4e-15 Score=142.49 Aligned_cols=213 Identities=9% Similarity=0.064 Sum_probs=148.3
Q ss_pred CCeEEEEEcCCCCEEEEEcC----CcEEEEEecC--CceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 86 PTLLHISFNQDHGCFAAGTD----HGFRIYNCDP--FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~----~gv~vw~~~~--~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
..|.+++|+|| +++++++. +..+||.++. .+...... .........++++++.++++++. ++.+.
T Consensus 65 ~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~--~~~~~~~~~~s~dg~~~~~~s~~------~~~~~ 135 (582)
T 3o4h_A 65 NSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLE--AVKPMRILSGVDTGEAVVFTGAT------EDRVA 135 (582)
T ss_dssp SEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECT--TSCSBEEEEEEECSSCEEEEEEC------SSCEE
T ss_pred cccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcccccc--CCCCceeeeeCCCCCeEEEEecC------CCCce
Confidence 57999999999 77776653 3467887755 33322222 23345577889999877766644 34556
Q ss_pred EEeCCCCcEEEEEeeCCceeEEEEeCC--eEEEEE-C----CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEE
Q 020784 160 IWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL-E----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~-~----~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la 232 (321)
|||+.+++......... .++.|+++ .++.+. + ..|++||+.+++.. .+..+.... ....+.+|+..|+
T Consensus 136 l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~--~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 136 LYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSF--SSASISPGMKVTA 210 (582)
T ss_dssp EEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEE--EEEEECTTSCEEE
T ss_pred EEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCcc--ccceECCCCCEEE
Confidence 99999887665555444 67778765 444332 3 47999999887754 565554443 4444455668888
Q ss_pred eecCCCC--cEEEEeeCCcceEEeeccccceeEEE--------ECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCc
Q 020784 233 CPGLQKG--QVRVEHYASKRTKFIMAHDSRIACFA--------LTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSI 302 (321)
Q Consensus 233 ~sGs~dg--~V~i~d~~~~~~~~l~~H~~~V~~va--------fspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~ 302 (321)
+++.+| .|++||..++....+.+|...|..++ |+|||.++++++.|++ ++||++ |++..+. ...
T Consensus 211 -~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~-~~l~~~--g~~~~~~--~~~ 284 (582)
T 3o4h_A 211 -GLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR-SAVFID--GERVEAP--QGN 284 (582)
T ss_dssp -EEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE-EEEEET--TEEECCC--SSE
T ss_pred -EccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc-EEEEEE--CCeeccC--CCc
Confidence 467788 78889998877667788888888888 9999999999999999 999999 7776522 222
Q ss_pred ceeEEEeecCceEEEee
Q 020784 303 SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 303 ~~~~~~s~d~~~la~~~ 319 (321)
...+.++ |+++++.+.
T Consensus 285 v~~~~~s-dg~~l~~~s 300 (582)
T 3o4h_A 285 HGRVVLW-RGKLVTSHT 300 (582)
T ss_dssp EEEEEEE-TTEEEEEEE
T ss_pred eEEEEec-CCEEEEEEc
Confidence 3345777 888886643
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=2.4e-14 Score=143.11 Aligned_cols=226 Identities=11% Similarity=0.043 Sum_probs=146.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCC---ce--EEEEEecCCCeEEEEeCCCCC--CCCCCcEE
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGG---GI--GVVEMLFRCNILALVGGGPDP--QYPLNKVM 159 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~---~v--~~v~~~~~~~~~~~~sg~~~~--~~~d~~v~ 159 (321)
...+++|+|||++|+++ ++.|++||+.+++....... |.. .+ ..+.++++++.+++.+..... ....+.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECT-TTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEec-hhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45579999999999998 77799999999876544332 221 12 226789999999887731100 00115678
Q ss_pred EEeCCCCcEEEEEeeCCceeEEEEeCC--eEEEEECCEEEEEEcCCcEEEEEEeccCCCCce-----------------E
Q 020784 160 IWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIETIANPKGL-----------------C 220 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~~I~iwd~~~~~~~~~l~~~~~~~~~-----------------~ 220 (321)
+||+.+++......+...+....|+++ .++.+.++.|++|++.+++..+ +........+ .
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCc
Confidence 999999986543334557889999986 4777788999999998776543 2221111101 1
Q ss_pred EEeeCCCceEEEeecCC---------------------------------CC--cEEEEeeCC---c---ceEEee----
Q 020784 221 AVSQGVGSLVLVCPGLQ---------------------------------KG--QVRVEHYAS---K---RTKFIM---- 255 (321)
Q Consensus 221 ~~s~~~d~~~la~sGs~---------------------------------dg--~V~i~d~~~---~---~~~~l~---- 255 (321)
++.+.||+..||+.... +. .|.+||+.+ + ....+.
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 23344566777753211 11 466688877 5 444454
Q ss_pred --ccccceeEEEECCCCCEEEEEeC----CCcEEEEEEcCCCc----EEE--EE-eCCCc-------ceeEEEeecCceE
Q 020784 256 --AHDSRIACFALTQDGQLLATSST----KGTLVRIFNTLDGT----LLQ--EE-CCPSI-------SAQSGLWLSSAWL 315 (321)
Q Consensus 256 --~H~~~V~~vafspdg~~las~S~----Dgt~IrIWd~~tg~----~i~--~~-~~g~~-------~~~~~~s~d~~~l 315 (321)
+|...+..++|+|||+++|.... +.. |++||+.+|+ |.. ++ ..++. .....+++||++|
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~-i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSV-MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEE-EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE-EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 38889999999999997776543 235 9999999998 321 11 12222 1234789999988
Q ss_pred E
Q 020784 316 R 316 (321)
Q Consensus 316 a 316 (321)
+
T Consensus 334 ~ 334 (740)
T 4a5s_A 334 Y 334 (740)
T ss_dssp E
T ss_pred E
Confidence 7
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=1.7e-13 Score=125.32 Aligned_cols=217 Identities=11% Similarity=-0.073 Sum_probs=135.2
Q ss_pred EEEcCCCCEEEEEcC-Cc---EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCC
Q 020784 91 ISFNQDHGCFAAGTD-HG---FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (321)
Q Consensus 91 v~fs~dg~~lasg~~-~g---v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~ 166 (321)
.+|+|||++|+.+++ ++ +.+||+++++....... +...+....++++++.++++. .++.|.+||+.++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~~l~~~~-------~~~~l~~~d~~~g 112 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDDALFYVK-------DGRNLMRVDLATL 112 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSSEEEEEE-------TTTEEEEEETTTC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCCEEEEEe-------CCCeEEEEECCCC
Confidence 789999999998877 56 66778777665322221 122222457899999999888 4578999999999
Q ss_pred cEEEEEeeCCc-eeEEE--EeCCe-EEEE------------------------ECCEEEEEEcCCcEEEEEEeccCCCCc
Q 020784 167 RCIGELSFRSE-VRSVK--LRRDR-IIVV------------------------LEQKIFVYNFADLKLLHQIETIANPKG 218 (321)
Q Consensus 167 ~~~~~~~~~~~-v~~v~--~~~~~-~~~~------------------------~~~~I~iwd~~~~~~~~~l~~~~~~~~ 218 (321)
+....+..+.. +.... ++++. .+++ ....|.+||+.+++... +..+.....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~ 191 (388)
T 3pe7_A 113 EENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLG 191 (388)
T ss_dssp CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEE
T ss_pred cceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCcccc
Confidence 87665555443 22222 34442 2221 12479999998886543 333333333
Q ss_pred eEEEeeCCCceEEEeecCC-----CCcEEEEeeCCcceEEeeccc--cceeEEEECCCCCEEEEEeCC-Cc---EEEEEE
Q 020784 219 LCAVSQGVGSLVLVCPGLQ-----KGQVRVEHYASKRTKFIMAHD--SRIACFALTQDGQLLATSSTK-GT---LVRIFN 287 (321)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~-----dg~V~i~d~~~~~~~~l~~H~--~~V~~vafspdg~~las~S~D-gt---~IrIWd 287 (321)
...+++. |+..|++.... ...|.+++...+....+..+. ..+..++|+|||+.||..+.+ +. .|.+||
T Consensus 192 ~~~~sp~-dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 192 HPIYRPY-DDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EEEEETT-EEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred ccEECCC-CCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 4445540 55666653332 236777777666666666665 358899999999988765542 21 299999
Q ss_pred cCCCcEE--EEEeCCCc-----ceeEEEeecCceEEEe
Q 020784 288 TLDGTLL--QEECCPSI-----SAQSGLWLSSAWLRVL 318 (321)
Q Consensus 288 ~~tg~~i--~~~~~g~~-----~~~~~~s~d~~~la~~ 318 (321)
+.+|+.. ..+. +.. .....+++||++|++.
T Consensus 271 ~~~g~~~~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 271 PETLENRQLTSMP-ACSHLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp TTTCCEEEEEEEC-CEEEEEECTTSSEEEEEECCC---
T ss_pred cCCCceEEEEcCC-CceeeeecCCCCeEccCCCcceeE
Confidence 9999853 3332 210 1122689999988753
No 162
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.57 E-value=8.7e-13 Score=120.81 Aligned_cols=215 Identities=14% Similarity=0.170 Sum_probs=137.3
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEEecCCceeEEeeee-----cCCceEEEEEecCCCeEEEEeCCCCCCC
Q 020784 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLFRCNILALVGGGPDPQY 153 (321)
Q Consensus 90 ~v~fs~dg~~lasg~-----------~~gv~vw~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~~~~sg~~~~~~ 153 (321)
.++|+|||++|+++. ++.|.+||..+.+........ ++.....+.++++++.++++..+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----- 128 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----- 128 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-----
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-----
Confidence 799999999998875 234889999988776555431 11234457888999988887632
Q ss_pred CCCcEEEEeCCCCcEEEE-EeeCCc---------------------eeEEEEeC--------------------------
Q 020784 154 PLNKVMIWDDHQSRCIGE-LSFRSE---------------------VRSVKLRR-------------------------- 185 (321)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~-~~~~~~---------------------v~~v~~~~-------------------------- 185 (321)
.+++|.+||+++++.+.+ +..... +..+.+..
T Consensus 129 ~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (361)
T 2oiz_A 129 PATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPA 208 (361)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEec
Confidence 248899999999988777 443221 11111110
Q ss_pred ---CeEEEE-ECCEEEEEEcCCc--EEEEEEeccC----------CCCceEEEeeCCCceEEEee--cC------CCCcE
Q 020784 186 ---DRIIVV-LEQKIFVYNFADL--KLLHQIETIA----------NPKGLCAVSQGVGSLVLVCP--GL------QKGQV 241 (321)
Q Consensus 186 ---~~~~~~-~~~~I~iwd~~~~--~~~~~l~~~~----------~~~~~~~~s~~~d~~~la~s--Gs------~dg~V 241 (321)
..++.. .++.|.++|+... ..+..+.... .....+++++++...+++.. |. ..+.|
T Consensus 209 ~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v 288 (361)
T 2oiz_A 209 LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEI 288 (361)
T ss_dssp ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEE
T ss_pred ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceE
Confidence 011111 1235566665422 1222221100 11113566665433333321 00 13478
Q ss_pred EEEeeCCcc-eEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCC--cEEEEE-eCCCcceeEEEeecCc
Q 020784 242 RVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG--TLLQEE-CCPSISAQSGLWLSSA 313 (321)
Q Consensus 242 ~i~d~~~~~-~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg--~~i~~~-~~g~~~~~~~~s~d~~ 313 (321)
.+||..+.+ +.++..|. +.+|+|+|||++|++++. ++ |.|||+.++ ++++++ ..|.....+.+++||.
T Consensus 289 ~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~-v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 289 WVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN-VNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SC-EEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce-EEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 889988766 55777777 999999999999998886 88 999999999 999997 5677777788899886
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=2.4e-11 Score=106.66 Aligned_cols=221 Identities=14% Similarity=0.172 Sum_probs=146.3
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeee-----cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
....+++++++|+++++... +.|.+||.+ ++........ +......+++......+.++..+ .++.|+
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~ 103 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQ 103 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEE
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEE
Confidence 46889999999998888765 568899976 4333222210 11245566664333344444421 147899
Q ss_pred EEeCCCCcEEEEEeeC--CceeEEEEeCCe-EEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEee
Q 020784 160 IWDDHQSRCIGELSFR--SEVRSVKLRRDR-IIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~--~~v~~v~~~~~~-~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~s 234 (321)
+|| .+++.+..+... ..+..+.+.++. ++++. ++.|++||.. ++.+..+...........+..++++.+++ +
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v-~ 180 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFI-S 180 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEE-E
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEE-E
Confidence 999 567766666432 368889998754 55554 3699999964 56666665322222345566666777766 4
Q ss_pred cCCCCcEEEEeeCCcceEEeecc--ccceeEEEECCCCCEEEEEeCCC-cEEEEEEcCCCcEEEEEeCCCc---ceeEEE
Q 020784 235 GLQKGQVRVEHYASKRTKFIMAH--DSRIACFALTQDGQLLATSSTKG-TLVRIFNTLDGTLLQEECCPSI---SAQSGL 308 (321)
Q Consensus 235 Gs~dg~V~i~d~~~~~~~~l~~H--~~~V~~vafspdg~~las~S~Dg-t~IrIWd~~tg~~i~~~~~g~~---~~~~~~ 308 (321)
...++.|.+|+...+.+..+..+ ...+..|+++++|+++++.+.++ . |++|| .+|+.+.++..+.. ...+++
T Consensus 181 ~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~-~~g~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 181 DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFT-QDGQLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp EGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEEC-TTSCEEEEEEESSCCSCEEEEEE
T ss_pred ECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEEC-CCCCEEEEEcccCCCCcceeEEE
Confidence 66788999999866656666443 46799999999999999988776 8 99999 46788877754322 234577
Q ss_pred eecCceEEE
Q 020784 309 WLSSAWLRV 317 (321)
Q Consensus 309 s~d~~~la~ 317 (321)
+++|++++.
T Consensus 259 ~~~g~l~vs 267 (286)
T 1q7f_A 259 MDDGSVVLA 267 (286)
T ss_dssp ETTTEEEEE
T ss_pred CCCCcEEEE
Confidence 788875543
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.53 E-value=6.5e-12 Score=113.20 Aligned_cols=220 Identities=8% Similarity=-0.011 Sum_probs=146.1
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-------------------------cEEEEEecCCceeEEeeeecCCceEEEEEecCCC
Q 020784 86 PTLLHISFNQDHGCFAAGTDH-------------------------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN 140 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~-------------------------gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 140 (321)
+.|.+|+|+++|++++++..+ .|.+||.++++........+-.....+++.++++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 479999999999999888765 4789998877764332210113566778888888
Q ss_pred eEEEEeCCCCCCCCCCcEEEEeCCCCc-EEEEEee----------CCceeEEEEeC--CeEEEEE---CCEEEEEEcCCc
Q 020784 141 ILALVGGGPDPQYPLNKVMIWDDHQSR-CIGELSF----------RSEVRSVKLRR--DRIIVVL---EQKIFVYNFADL 204 (321)
Q Consensus 141 ~~~~~sg~~~~~~~d~~v~iWD~~~~~-~~~~~~~----------~~~v~~v~~~~--~~~~~~~---~~~I~iwd~~~~ 204 (321)
++++-. .++.|++||..... .+..+.. -..+..+++++ ..++++. ++.|++|+ .++
T Consensus 104 l~v~d~-------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 104 YWVTDV-------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp EEEEET-------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred EEEEEC-------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 554443 35899999986542 4444421 12578899986 3466654 35999999 567
Q ss_pred EEEEEEeccCCC--------CceEEEeeCCC-ceEEEeecCCCCcEEEEeeCCcc-eEEe--eccccceeEEEECC----
Q 020784 205 KLLHQIETIANP--------KGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYASKR-TKFI--MAHDSRIACFALTQ---- 268 (321)
Q Consensus 205 ~~~~~l~~~~~~--------~~~~~~s~~~d-~~~la~sGs~dg~V~i~d~~~~~-~~~l--~~H~~~V~~vafsp---- 268 (321)
+.+..+...... .....+..+++ +.+++ +...++.|++|+..++. +..+ ..+...+..++|+|
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v-~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~ 254 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV-ADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLF 254 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE-EETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEE
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE-EECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEE
Confidence 777777432211 11334444455 56665 47788899999987444 4555 35677899999999
Q ss_pred --CCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC----CCcceeEEEeecCceE
Q 020784 269 --DGQLLATSSTKGTLVRIFNTLDGTLLQEECC----PSISAQSGLWLSSAWL 315 (321)
Q Consensus 269 --dg~~las~S~Dgt~IrIWd~~tg~~i~~~~~----g~~~~~~~~s~d~~~l 315 (321)
+|..+++.+.+.+ |++||+.+|+++.++.. ......+++++||..+
T Consensus 255 ~~~g~~~v~~~~~~~-v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQ-GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp EEECCCCTTCSCCCC-EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred EeCCCEEeccCCCcE-EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 4443333444558 99999999999998841 2224456778888443
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.53 E-value=9.1e-12 Score=113.05 Aligned_cols=201 Identities=10% Similarity=0.136 Sum_probs=128.9
Q ss_pred CCCeEEEEEcCCCCEEEEEcC--CcEEEEEecCCceeEE----eeee---------cCCceEEEEEecCCCeEEEEeCCC
Q 020784 85 PPTLLHISFNQDHGCFAAGTD--HGFRIYNCDPFREIFR----RDFE---------RGGGIGVVEMLFRCNILALVGGGP 149 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~--~gv~vw~~~~~~~~~~----~~~~---------~~~~v~~v~~~~~~~~~~~~sg~~ 149 (321)
......+++ ||++|++++. +.+.+|++...+.+.. ..+. +...+..++++++++.++++..+
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~- 175 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG- 175 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-
Confidence 346777888 8888777653 4488999975432211 1110 01223668899999877776632
Q ss_pred CCCCCCCcEEEEeCCCCc-------E-------EEEEeeCCceeEEEEeCCe--EEEEE--CCEEEEEEcCCcEE--EEE
Q 020784 150 DPQYPLNKVMIWDDHQSR-------C-------IGELSFRSEVRSVKLRRDR--IIVVL--EQKIFVYNFADLKL--LHQ 209 (321)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~-------~-------~~~~~~~~~v~~v~~~~~~--~~~~~--~~~I~iwd~~~~~~--~~~ 209 (321)
++.|++|++.... . ...+.....+..+.|+++. ++++. ++.|++|++.++++ +..
T Consensus 176 -----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 176 -----TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp -----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred -----CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 5889999887433 2 1122223467889999874 55665 46999999987654 333
Q ss_pred EeccCC-CCceEEEeeCCCceEEEeecCC-CCcEEEEeeC--CcceE---EeeccccceeEEEECCCCCEEEEEe-CCCc
Q 020784 210 IETIAN-PKGLCAVSQGVGSLVLVCPGLQ-KGQVRVEHYA--SKRTK---FIMAHDSRIACFALTQDGQLLATSS-TKGT 281 (321)
Q Consensus 210 l~~~~~-~~~~~~~s~~~d~~~la~sGs~-dg~V~i~d~~--~~~~~---~l~~H~~~V~~vafspdg~~las~S-~Dgt 281 (321)
+..... ......+..++|+.+|++++.. ++.|.+|++. ++.+. .+.. ...+++++|+|||++|++++ .+++
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCC
Confidence 333211 1223455556666777655666 6899999985 33332 3333 55789999999999888887 4566
Q ss_pred EEEEE--EcCCCcEEE
Q 020784 282 LVRIF--NTLDGTLLQ 295 (321)
Q Consensus 282 ~IrIW--d~~tg~~i~ 295 (321)
|+|| |..+|++..
T Consensus 330 -v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 330 -IQIFERDQATGLLTD 344 (361)
T ss_dssp -EEEEEECTTTCCEEE
T ss_pred -EEEEEEECCCCcEee
Confidence 9996 556788754
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.52 E-value=1.4e-12 Score=119.21 Aligned_cols=233 Identities=11% Similarity=0.037 Sum_probs=139.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEE--EecCCCeEEEEeCCCC---------
Q 020784 83 SPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVE--MLFRCNILALVGGGPD--------- 150 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~--~~~~~~~~~~~sg~~~--------- 150 (321)
.+...+..+.|+|||++|+.++. ..+.+||+.+++....... +.+.+.... ..+++..++.......
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCCeeccccccCcccccccccc
Confidence 34344556789999999998886 4688999998876544443 233333333 3566766653320000
Q ss_pred ------CCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeC-Ce--EEEEEC-------CEEEEEEcCCcEEEEEEeccC
Q 020784 151 ------PQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DR--IIVVLE-------QKIFVYNFADLKLLHQIETIA 214 (321)
Q Consensus 151 ------~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~-~~--~~~~~~-------~~I~iwd~~~~~~~~~l~~~~ 214 (321)
....+..|.+||+.+++..........+..+.|++ +. ++.+.. ..|.++|...++. +.+..+.
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~ 235 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHA 235 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCC
T ss_pred hhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCC
Confidence 00024789999999998766666666788899999 64 433432 2677788765443 3333332
Q ss_pred CCCceEEEeeCCCceEEEeecCCCC----cEEEEeeCCcceEEeecccc---c---eeEEEECCCCCEEEEE--------
Q 020784 215 NPKGLCAVSQGVGSLVLVCPGLQKG----QVRVEHYASKRTKFIMAHDS---R---IACFALTQDGQLLATS-------- 276 (321)
Q Consensus 215 ~~~~~~~~s~~~d~~~la~sGs~dg----~V~i~d~~~~~~~~l~~H~~---~---V~~vafspdg~~las~-------- 276 (321)
....+....+.+|+..|++.+..++ .|.+||..++....+..... . ...++|+|||++|+..
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 315 (388)
T 3pe7_A 236 EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYK 315 (388)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-----------
T ss_pred CCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccc
Confidence 2122333344556665554333322 38889988766443322211 1 2234799999988854
Q ss_pred -eCCCcEEEEEEcCCCcEEEEEeCCCc------------ceeEEEeecCceEEEee
Q 020784 277 -STKGTLVRIFNTLDGTLLQEECCPSI------------SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 277 -S~Dgt~IrIWd~~tg~~i~~~~~g~~------------~~~~~~s~d~~~la~~~ 319 (321)
..+.. |.+||+.+++.. .+..... .....+++||++|++++
T Consensus 316 ~~~~~~-i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 316 IENDPF-LYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp -CCCCE-EEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred cCCCCE-EEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEe
Confidence 33556 999999998764 3432222 33458899999998764
No 167
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.52 E-value=7.1e-12 Score=112.84 Aligned_cols=209 Identities=14% Similarity=0.076 Sum_probs=131.0
Q ss_pred CCeEEEEEcCCCCEEEEEcCC---c---EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCC---------
Q 020784 86 PTLLHISFNQDHGCFAAGTDH---G---FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPD--------- 150 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~---g---v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~--------- 150 (321)
..+.+++|+|||++||..+.+ + +.+|++++++....... .. +..+.|+++++.+++++....
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~--~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA--KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE--SE-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC--CC-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 358889999999999977642 2 55667776654333332 33 888899999998888762100
Q ss_pred -C-------C---CCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCCeEEEEE-C-------C-EEEEEEcCCcEEEEEE
Q 020784 151 -P-------Q---YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVL-E-------Q-KIFVYNFADLKLLHQI 210 (321)
Q Consensus 151 -~-------~---~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~-------~-~I~iwd~~~~~~~~~l 210 (321)
. . -....|.+||+.+++.+..+... .+..+.|+++.++... . . ...+|.+.+++. ..+
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l 213 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKE-EKM 213 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEE-EEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCeEEEEEecccccccccccccEEEeCCCce-EEe
Confidence 0 0 01257999999988774444444 7888999998844433 1 1 334444435554 344
Q ss_pred eccCCCCceEEEeeCCCceEEEeecCC-------CCcEEEEeeCCcceE-EeeccccceeE-EEECCCCCEEEEEeCCCc
Q 020784 211 ETIANPKGLCAVSQGVGSLVLVCPGLQ-------KGQVRVEHYASKRTK-FIMAHDSRIAC-FALTQDGQLLATSSTKGT 281 (321)
Q Consensus 211 ~~~~~~~~~~~~s~~~d~~~la~sGs~-------dg~V~i~d~~~~~~~-~l~~H~~~V~~-vafspdg~~las~S~Dgt 281 (321)
..+ .....+++ |+..|++.+.. .+.|.+|+ ++... ....|...+.. ++|+ || ++++++.|+.
T Consensus 214 ~~~---~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 214 FEK---VSFYAVDS--DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp EEE---ESEEEEEE--CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred ccC---cceeeECC--CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 333 22334455 44555543332 24677777 44444 34566788886 9999 99 9999999998
Q ss_pred EEEEEEcCCCcEEEEEeCCCcceeEEEeecC
Q 020784 282 LVRIFNTLDGTLLQEECCPSISAQSGLWLSS 312 (321)
Q Consensus 282 ~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~ 312 (321)
++|| +.+|+....+ .+ ...+..+++++
T Consensus 285 -~~l~-~~~g~~~~~~-~~-~~~v~~~~~s~ 311 (347)
T 2gop_A 285 -VNLY-IWDGEIKPIA-KG-RHWIMGFDVDE 311 (347)
T ss_dssp -EEEE-EESSSEEEEE-CS-SSEEEEEEESS
T ss_pred -EEEE-EcCCceEEEe-cC-CCeEEeeeeeC
Confidence 9999 8888764443 23 33444555555
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.48 E-value=1.4e-12 Score=119.25 Aligned_cols=217 Identities=10% Similarity=-0.100 Sum_probs=133.2
Q ss_pred eEEEEEcCCCCEEEEEcCC----cEEEEEecCCceeEEeeeecCCce-EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 88 LLHISFNQDHGCFAAGTDH----GFRIYNCDPFREIFRRDFERGGGI-GVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 88 V~~v~fs~dg~~lasg~~~----gv~vw~~~~~~~~~~~~~~~~~~v-~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
+.+++|+|||++|+...+. .+.+|++++++... ... +.... ....|+++++.+++++ .++.|.+||
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~-~~~~~~~~~~~spdg~~l~~~~-------~~~~l~~~d 108 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTE-GKGDNTFGGFISTDERAFFYVK-------NELNLMKVD 108 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCC-SSCBCTTTCEECTTSSEEEEEE-------TTTEEEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eec-CCCCccccceECCCCCEEEEEE-------cCCcEEEEE
Confidence 5668999999998876542 36677877765422 221 12222 2257899999998888 457899999
Q ss_pred CCCCcEEEEEeeCCce-eE---E----------------EEeCCe--EEE------EECCEEEEEEcCCcEEEEEEeccC
Q 020784 163 DHQSRCIGELSFRSEV-RS---V----------------KLRRDR--IIV------VLEQKIFVYNFADLKLLHQIETIA 214 (321)
Q Consensus 163 ~~~~~~~~~~~~~~~v-~~---v----------------~~~~~~--~~~------~~~~~I~iwd~~~~~~~~~l~~~~ 214 (321)
+.+++.......+... .. + .++++. +++ .....|.+||+.+++...... +.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~ 187 (396)
T 3c5m_A 109 LETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DT 187 (396)
T ss_dssp TTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ES
T ss_pred CCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CC
Confidence 9988765554433221 01 1 122211 111 122489999998877654443 33
Q ss_pred CCCceEEEeeCCCceEEEeecCC-C----CcEEEEeeCCcceEEeecc--ccceeEEEECCCCCEEEEEeCC-----CcE
Q 020784 215 NPKGLCAVSQGVGSLVLVCPGLQ-K----GQVRVEHYASKRTKFIMAH--DSRIACFALTQDGQLLATSSTK-----GTL 282 (321)
Q Consensus 215 ~~~~~~~~s~~~d~~~la~sGs~-d----g~V~i~d~~~~~~~~l~~H--~~~V~~vafspdg~~las~S~D-----gt~ 282 (321)
.......++++ ++..|++.... . ..|.+++...+....+..+ ...+..++|+|||++|+.++.+ +.
T Consensus 188 ~~~~~~~~sp~-dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~- 265 (396)
T 3c5m_A 188 AWLGHPIYRPF-DDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV- 265 (396)
T ss_dssp SCEEEEEEETT-EEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE-
T ss_pred cccccceECCC-CCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccce-
Confidence 33344455551 34544442222 1 3577788766655555444 2358899999999988877654 45
Q ss_pred EEEEEcCCCcEEEEEeCCCcceeEEEee-cCceEEEe
Q 020784 283 VRIFNTLDGTLLQEECCPSISAQSGLWL-SSAWLRVL 318 (321)
Q Consensus 283 IrIWd~~tg~~i~~~~~g~~~~~~~~s~-d~~~la~~ 318 (321)
|++||+.+|+......... ....+++ ||++|+.+
T Consensus 266 l~~~d~~~g~~~~l~~~~~--~~~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 266 IYKANPETLENEEVMVMPP--CSHLMSNFDGSLMVGD 300 (396)
T ss_dssp EEEECTTTCCEEEEEECCS--EEEEEECSSSSEEEEE
T ss_pred EEEEECCCCCeEEeeeCCC--CCCCccCCCCceEEEe
Confidence 9999999998654332221 1267788 99988764
No 169
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.48 E-value=1e-13 Score=137.65 Aligned_cols=219 Identities=7% Similarity=-0.046 Sum_probs=137.3
Q ss_pred CeEEEEEcCCCCEEEEEcC----------CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCC
Q 020784 87 TLLHISFNQDHGCFAAGTD----------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~----------~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~ 156 (321)
.|.+++|||||++||.+++ ..+++||+++++......+ ...+..+.|+++++.++++. ++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--~~~~~~~~~SPDG~~la~~~--------~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--PRPIQYLCWSPVGSKLAYVY--------QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--CSSBCCEEECSSTTCEEEEE--------TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec--CcccccceECCCCCEEEEEE--------CC
Confidence 3889999999999998875 4588999988765211222 34577789999999999886 57
Q ss_pred cEEEEeCCCCcEEEEEeeC-C-ce-----------------eEEEEeCCe--EEEEE-CC--------------------
Q 020784 157 KVMIWDDHQSRCIGELSFR-S-EV-----------------RSVKLRRDR--IIVVL-EQ-------------------- 194 (321)
Q Consensus 157 ~v~iWD~~~~~~~~~~~~~-~-~v-----------------~~v~~~~~~--~~~~~-~~-------------------- 194 (321)
+|++||+.+++........ . .| .++.|+++. ++.+. ++
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 9999999988765422111 1 12 478999874 44443 21
Q ss_pred --------------EEEEEEcCCcEEE--EEE------eccCCCCceEEEeeCCCceEEEee-cCCCC--cEEEEe----
Q 020784 195 --------------KIFVYNFADLKLL--HQI------ETIANPKGLCAVSQGVGSLVLVCP-GLQKG--QVRVEH---- 245 (321)
Q Consensus 195 --------------~I~iwd~~~~~~~--~~l------~~~~~~~~~~~~s~~~d~~~la~s-Gs~dg--~V~i~d---- 245 (321)
.|++||+.+++.+ ..+ ..+...+...+++ +|+.+++.. ...++ .|.+||
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S--pD~~~~~~~~~~~~~~~~l~~~d~~~~ 288 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWV--TDERVCLQWLKRVQNVSVLSICDFRED 288 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEES--SSSEEEEEEEESSTTEEEEEEEEECSS
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEe--CCCeEEEEEeccccCeEEEEEEcccCC
Confidence 7889999877642 111 1222223334444 456666531 12222 466688
Q ss_pred eCCcceE-Ee----ecccccee-----EEEECCCCCEEEE--EeCCCc-EEEEEEcCCCcEEEEEeCCCcc-eeEEEeec
Q 020784 246 YASKRTK-FI----MAHDSRIA-----CFALTQDGQLLAT--SSTKGT-LVRIFNTLDGTLLQEECCPSIS-AQSGLWLS 311 (321)
Q Consensus 246 ~~~~~~~-~l----~~H~~~V~-----~vafspdg~~las--~S~Dgt-~IrIWd~~tg~~i~~~~~g~~~-~~~~~s~d 311 (321)
..++... .+ .+|...|. .++|+|||+.|+. ...+|. .|.+||+.+++ ...+..+... ....++ +
T Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d 366 (719)
T 1z68_A 289 WQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-T 366 (719)
T ss_dssp SSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-C
T ss_pred CCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-e
Confidence 6555433 33 46777787 8999999996554 444553 26677887777 3455433322 223445 8
Q ss_pred CceEEEee
Q 020784 312 SAWLRVLR 319 (321)
Q Consensus 312 ~~~la~~~ 319 (321)
+++|++..
T Consensus 367 ~~~i~~~~ 374 (719)
T 1z68_A 367 QDSLFYSS 374 (719)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 88776643
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.47 E-value=4.5e-11 Score=104.82 Aligned_cols=193 Identities=12% Similarity=0.107 Sum_probs=129.9
Q ss_pred CCeEEEEE-cCCCCEEEEEc--CCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 86 PTLLHISF-NQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 86 ~~V~~v~f-s~dg~~lasg~--~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
..+.+++| .++|++++++. ++.|++|+ ..++........+......+++.+++++++... .++.|.+||
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~~~~ 148 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVEC-------KVMRVIIFD 148 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEET-------TTTEEEEEC
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEEC-------CCCEEEEEc
Confidence 46889999 57888877774 56788998 444443333211123567778888887554433 358899999
Q ss_pred CCCCcEEEEEeeC---CceeEEEEeCCe-EEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 163 DHQSRCIGELSFR---SEVRSVKLRRDR-IIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 163 ~~~~~~~~~~~~~---~~v~~v~~~~~~-~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
.. ++.+..+... ..+..++++++. ++++. ++.|++||.. ++.+..+...........+..++++.++++ ..
T Consensus 149 ~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~-~~ 225 (286)
T 1q7f_A 149 QN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIA-DN 225 (286)
T ss_dssp TT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEE-EC
T ss_pred CC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEE-eC
Confidence 64 5555555432 358889998764 55554 4699999974 556666654322223445566667777774 55
Q ss_pred CCC-cEEEEeeCCcceEEeecccc--ceeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 020784 237 QKG-QVRVEHYASKRTKFIMAHDS--RIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 237 ~dg-~V~i~d~~~~~~~~l~~H~~--~V~~vafspdg~~las~S~Dgt~IrIWd~~tg 291 (321)
.++ .|.+|+...+.+..+..+.. .+.+++|+|+|+++++ +.|++ |+||++...
T Consensus 226 ~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~-v~v~~~~~~ 281 (286)
T 1q7f_A 226 HNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYR-LYIYRYVQL 281 (286)
T ss_dssp SSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTE-EEEEECSCC
T ss_pred CCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCe-EEEEEcccc
Confidence 565 99999976655666665543 4789999999998887 56888 999998654
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.46 E-value=3.6e-10 Score=101.15 Aligned_cols=225 Identities=8% Similarity=0.002 Sum_probs=143.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 84 PPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
+...+.+++|+++|++++++.. ++|.+||.++.+....... +...+..+++.+++++++...++.. ..+.|.+||
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~---~~~~i~~~d 118 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFK---STGGIFAAT 118 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSCEEEEECTTSS---SCCEEEEEC
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCcEEEEeCCCCC---CCceEEEEe
Confidence 3346789999999998888776 5688999887765432211 3566888888888876655442100 125899999
Q ss_pred CCCCcEEEEEe---eCCceeEEEEeCCe-EEEEEC--------CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceE
Q 020784 163 DHQSRCIGELS---FRSEVRSVKLRRDR-IIVVLE--------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 163 ~~~~~~~~~~~---~~~~v~~v~~~~~~-~~~~~~--------~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
.+++.....+. ....+..+.+.++. ++++.. +.|..||..+++... +..... ....+..++++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~--~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNIS--VANGIALSTDEKV 195 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEES--SEEEEEECTTSSE
T ss_pred CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCC--cccceEECCCCCE
Confidence 98877543332 12357888898764 555543 356666655444432 222111 1334445556554
Q ss_pred EEeecCCCCcEEEEeeCC--cceEE--------eeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 231 LVCPGLQKGQVRVEHYAS--KRTKF--------IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~~--~~~~~--------l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
+.++.+.++.|.+|+... ..+.. +.++ ..+..++++++|.++++...++. |++||. +++.+.++...
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~-v~~~d~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGR-VLVFNK-RGYPIGQILIP 272 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTE-EEEECT-TSCEEEEEECT
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCE-EEEECC-CCCEEEEEEcC
Confidence 443456678899998853 22221 1222 46889999999999988887888 999998 68888887644
Q ss_pred C-------cceeEEEeecCceEEEe
Q 020784 301 S-------ISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 301 ~-------~~~~~~~s~d~~~la~~ 318 (321)
. ....+++++|+++|.++
T Consensus 273 ~~~~g~~~~~~~~~~~~dg~~L~v~ 297 (333)
T 2dg1_A 273 GRDEGHMLRSTHPQFIPGTNQLIIC 297 (333)
T ss_dssp TGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred CCccccccCcceEEECCCCCEEEEE
Confidence 3 23455777888777654
No 172
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.45 E-value=4.6e-11 Score=109.05 Aligned_cols=198 Identities=10% Similarity=0.009 Sum_probs=128.7
Q ss_pred eEEEEEcCCCCE--EEEEc--------------CCcEEEEEecC-CceeEEeee---ecCCceEEEEEecCCCeEEEEeC
Q 020784 88 LLHISFNQDHGC--FAAGT--------------DHGFRIYNCDP-FREIFRRDF---ERGGGIGVVEMLFRCNILALVGG 147 (321)
Q Consensus 88 V~~v~fs~dg~~--lasg~--------------~~gv~vw~~~~-~~~~~~~~~---~~~~~v~~v~~~~~~~~~~~~sg 147 (321)
+.+++|+|||++ ++++. ++.+.+|+++. ++....... .+...+..+.++++++.++++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 556899999994 55543 34588999974 443222211 12456788899999988776653
Q ss_pred CCCCCCCCCcEEEEeCC-CCcEE--EEEee---CCceeEEEEeCCe--EEEEE--CCEEEEEEcC--CcEEE---EEEec
Q 020784 148 GPDPQYPLNKVMIWDDH-QSRCI--GELSF---RSEVRSVKLRRDR--IIVVL--EQKIFVYNFA--DLKLL---HQIET 212 (321)
Q Consensus 148 ~~~~~~~d~~v~iWD~~-~~~~~--~~~~~---~~~v~~v~~~~~~--~~~~~--~~~I~iwd~~--~~~~~---~~l~~ 212 (321)
+ ++.|++||++ +++.. ..+.. ...+..+.|+++. ++++. ++.|.+|++. ++++. +.+..
T Consensus 165 ~------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 238 (365)
T 1jof_A 165 T------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL 238 (365)
T ss_dssp T------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred C------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc
Confidence 2 4789999998 77653 33432 3468899999864 55555 3699999874 45543 23332
Q ss_pred cCCC----C-------ceEEEe-eCCCceEEEeecCCCC-----cEEEEeeC-CcceEE----eeccccceeEEEECC--
Q 020784 213 IANP----K-------GLCAVS-QGVGSLVLVCPGLQKG-----QVRVEHYA-SKRTKF----IMAHDSRIACFALTQ-- 268 (321)
Q Consensus 213 ~~~~----~-------~~~~~s-~~~d~~~la~sGs~dg-----~V~i~d~~-~~~~~~----l~~H~~~V~~vafsp-- 268 (321)
.... . ....+. .++|+.+|+++...++ .|.+|++. ++.+.. ...+...+..++|+|
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP 318 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence 1110 1 244455 5566676654333333 89999985 444442 333566788999999
Q ss_pred -CCCEEEEEeCC-CcEEEEEEcCCCc
Q 020784 269 -DGQLLATSSTK-GTLVRIFNTLDGT 292 (321)
Q Consensus 269 -dg~~las~S~D-gt~IrIWd~~tg~ 292 (321)
||++|++++.+ ++ |+||++....
T Consensus 319 ~dg~~l~v~~~~~~~-v~v~~~~~~~ 343 (365)
T 1jof_A 319 WSDEWMAITDDQEGW-LEIYRWKDEF 343 (365)
T ss_dssp TCTTEEEEECSSSCE-EEEEEEETTE
T ss_pred cCCCEEEEEEcCCCe-EEEEEEchhh
Confidence 89999999875 77 9999997763
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.43 E-value=6.8e-12 Score=123.20 Aligned_cols=222 Identities=10% Similarity=-0.026 Sum_probs=136.1
Q ss_pred EEEEc--CCCCE-EEEEcCCcEEEEEecCC----ceeEEeeee----cCCceEEEEEecCCCeEEEEeCCCC---CCCCC
Q 020784 90 HISFN--QDHGC-FAAGTDHGFRIYNCDPF----REIFRRDFE----RGGGIGVVEMLFRCNILALVGGGPD---PQYPL 155 (321)
Q Consensus 90 ~v~fs--~dg~~-lasg~~~gv~vw~~~~~----~~~~~~~~~----~~~~v~~v~~~~~~~~~~~~sg~~~---~~~~d 155 (321)
...|+ |||++ |+.++++..+||.++.. +........ |...+..++|+++++.+++++.... .....
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 45555 99998 88877655456665543 332222210 1235677899999999988773200 00011
Q ss_pred CcEEEEeCCC------CcEEEEE-eeCCceeEEEEeCCe--EEEEE-C--------CEEEEEEcC-Cc---EEEEEEecc
Q 020784 156 NKVMIWDDHQ------SRCIGEL-SFRSEVRSVKLRRDR--IIVVL-E--------QKIFVYNFA-DL---KLLHQIETI 213 (321)
Q Consensus 156 ~~v~iWD~~~------~~~~~~~-~~~~~v~~v~~~~~~--~~~~~-~--------~~I~iwd~~-~~---~~~~~l~~~ 213 (321)
.+|++||+.+ ++..... .....+..+.|+++. ++.+. + ..|++||+. ++ +.......+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 5899999988 6654333 334567778898875 54443 3 379999998 56 443333333
Q ss_pred CCCCceEEEeeCCCceEEEeecCCCCcEEE--EeeCCcceEEeeccccc---------eeEEEECCCCCEEEEEeCCCcE
Q 020784 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRV--EHYASKRTKFIMAHDSR---------IACFALTQDGQLLATSSTKGTL 282 (321)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~V~i--~d~~~~~~~~l~~H~~~---------V~~vafspdg~~las~S~Dgt~ 282 (321)
.......+++ +|+.+++ +++.+|...| |+..++....+..+... +.+++|+|+++++++++. ++
T Consensus 241 ~~~~~~~~~s--pdg~l~~-~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~- 315 (662)
T 3azo_A 241 EEAIAQAEWA--PDGSLIV-ATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA- 315 (662)
T ss_dssp TBCEEEEEEC--TTSCEEE-EECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS-
T ss_pred CceEcceEEC--CCCeEEE-EECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc-
Confidence 3333344444 4556554 4677785455 55545555554443322 578999999999999998 88
Q ss_pred EEEE--EcCCCcEEEEEeCCCcceeEEE-eecCceEEEe
Q 020784 283 VRIF--NTLDGTLLQEECCPSISAQSGL-WLSSAWLRVL 318 (321)
Q Consensus 283 IrIW--d~~tg~~i~~~~~g~~~~~~~~-s~d~~~la~~ 318 (321)
++|| |+.+++ ++++. .+......+ ++++..++++
T Consensus 316 ~~l~~~d~~~~~-~~~l~-~~~~~~~~~~s~~~~~~~~~ 352 (662)
T 3azo_A 316 AVLGILDPESGE-LVDAA-GPWTEWAATLTVSGTRAVGV 352 (662)
T ss_dssp CEEEEEETTTTE-EEECC-SSCCEEEEEEEEETTEEEEE
T ss_pred cEEEEEECCCCc-EEEec-CCCCeEEEEEecCCCEEEEE
Confidence 9999 555565 56664 333334455 7888776654
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.42 E-value=2.7e-10 Score=100.55 Aligned_cols=215 Identities=8% Similarity=-0.062 Sum_probs=141.4
Q ss_pred CCeEEEEEcCCCC-EEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHG-CFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~-~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
.-..+++|+++|+ +++++.. ++|.+|+.++. . ..... +...+..+++.+++++++... .++.|.+||.
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-~~~~~-~~~~~~~l~~~~dg~l~v~~~-------~~~~i~~~d~ 97 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-SPEMH-PSHHQNGHCLNKQGHLIACSH-------GLRRLERQRE 97 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-EEEES-SCSSEEEEEECTTCCEEEEET-------TTTEEEEECS
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-EEEEC-CCCCcceeeECCCCcEEEEec-------CCCeEEEEcC
Confidence 4578999999998 6677765 66889998876 2 22222 355677888888888665544 2478999999
Q ss_pred CCCcEEEEEee-C----CceeEEEEeCCe-EEEEE-------------------CCEEEEEEcCCcEEEEEEeccCCCCc
Q 020784 164 HQSRCIGELSF-R----SEVRSVKLRRDR-IIVVL-------------------EQKIFVYNFADLKLLHQIETIANPKG 218 (321)
Q Consensus 164 ~~~~~~~~~~~-~----~~v~~v~~~~~~-~~~~~-------------------~~~I~iwd~~~~~~~~~l~~~~~~~~ 218 (321)
.+++....... . ..+..+.+.++. ++++. .+.|..++.. ++. ..+..+.. .
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~--~ 173 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRV--K 173 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCS--S
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCC--C
Confidence 88876443321 1 235678888765 44431 1255555554 443 33333222 2
Q ss_pred eEEEeeCCCceEEEeecCCCCcEEEEeeC-Ccce----EEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRT----KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~dg~V~i~d~~-~~~~----~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
...+..++++.++ ++.+.++.|.+|++. .+.+ ..+..+...+..|+++++|+++++. ++. |++||.. |++
T Consensus 174 ~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~~~-g~~ 248 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLTPD-GDE 248 (296)
T ss_dssp EEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEECTT-SCE
T ss_pred CccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEECCC-CCE
Confidence 2344455566777 457888899999985 3333 2334466778899999999988766 777 9999986 888
Q ss_pred EEEEeCCCcceeEEE-eecCceEEEee
Q 020784 294 LQEECCPSISAQSGL-WLSSAWLRVLR 319 (321)
Q Consensus 294 i~~~~~g~~~~~~~~-s~d~~~la~~~ 319 (321)
+..+........+.| .+++++|.++.
T Consensus 249 ~~~~~~~~~~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 249 LGRVLTPQTTSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp EEEEECSSCCCEEEEESTTSCEEEEEE
T ss_pred EEEEECCCCceeEEEECCCCCEEEEEc
Confidence 888865444444566 46778887754
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.40 E-value=1.3e-11 Score=112.75 Aligned_cols=222 Identities=9% Similarity=-0.004 Sum_probs=130.2
Q ss_pred EEEEcCCCCEEEEEcCC-cEEEEEecCCceeEEeeeecCCceEE-------------------EEEecCCCeEEEEeCCC
Q 020784 90 HISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGV-------------------VEMLFRCNILALVGGGP 149 (321)
Q Consensus 90 ~v~fs~dg~~lasg~~~-gv~vw~~~~~~~~~~~~~~~~~~v~~-------------------v~~~~~~~~~~~~sg~~ 149 (321)
.+.|+|||++|+.++.+ .+.+|++++++....... +.+.... +.++++++.+++....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~- 162 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY- 162 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH-
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec-
Confidence 37899999999887764 588999988765433332 1221111 1112222222221100
Q ss_pred CCCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeC-Ce--EEEEEC-------CEEEEEEcCCcEEEEEEeccCCCCce
Q 020784 150 DPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DR--IIVVLE-------QKIFVYNFADLKLLHQIETIANPKGL 219 (321)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~-~~--~~~~~~-------~~I~iwd~~~~~~~~~l~~~~~~~~~ 219 (321)
....+..|.+||+.+++..........+..+.|++ +. ++.+.+ ..|.+||+..++. +.+..+.....+
T Consensus 163 -~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~ 240 (396)
T 3c5m_A 163 -HTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESC 240 (396)
T ss_dssp -HTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEE
T ss_pred -cCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccc
Confidence 00134689999999988766666666788899988 43 444443 3688888865543 233222111123
Q ss_pred EEEeeCCCceEEEeecCCC----CcEEEEeeCCcceEEeeccccceeEEEECC-CCCEEEEEeC----------------
Q 020784 220 CAVSQGVGSLVLVCPGLQK----GQVRVEHYASKRTKFIMAHDSRIACFALTQ-DGQLLATSST---------------- 278 (321)
Q Consensus 220 ~~~s~~~d~~~la~sGs~d----g~V~i~d~~~~~~~~l~~H~~~V~~vafsp-dg~~las~S~---------------- 278 (321)
..+.+.+|+..|++.+..+ +.|.+||+.++....+..... .. ++|+| ||++|+.++.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 3344455556555433222 348889987766554433222 33 89999 9999987652
Q ss_pred CCcEEEEEEcCCCcEEEEEeCCCc------------ceeEEEeecCceEEEee
Q 020784 279 KGTLVRIFNTLDGTLLQEECCPSI------------SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 279 Dgt~IrIWd~~tg~~i~~~~~g~~------------~~~~~~s~d~~~la~~~ 319 (321)
++. |.+||+.+++.. .+..... .....+++||++|+.++
T Consensus 319 ~~~-i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 319 DPF-LYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp CCE-EEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred CCc-EEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEe
Confidence 356 999999988753 3322221 22347899999988764
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.40 E-value=3.8e-10 Score=101.63 Aligned_cols=215 Identities=7% Similarity=-0.069 Sum_probs=146.5
Q ss_pred CeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 87 TLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
....+.+.. ++++++... +.+.+||..+++.+..... ......+++++++. +.++.. .++.|.+||..+
T Consensus 45 ~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~--~~~p~~i~~~~~g~-lyv~~~------~~~~v~~iD~~t 114 (328)
T 3dsm_A 45 VAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITG--FTSPRYIHFLSDEK-AYVTQI------WDYRIFIINPKT 114 (328)
T ss_dssp CEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEEC--CSSEEEEEEEETTE-EEEEEB------SCSEEEEEETTT
T ss_pred cceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCC--CCCCcEEEEeCCCe-EEEEEC------CCCeEEEEECCC
Confidence 467788853 444444444 6688999999987665542 45566777766764 433331 258999999999
Q ss_pred CcEEEEEeeCC------ceeEEEEeCCeEEEEE---CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 166 SRCIGELSFRS------EVRSVKLRRDRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 166 ~~~~~~~~~~~------~v~~v~~~~~~~~~~~---~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
++....+.... .+..+.+..+.++++. ++.|.+||+.+++.+.++.....+.. +.+ ++++.++++ ..
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~-i~~--~~dG~l~v~-~~ 190 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTS-LVM--DKYNKMWTI-TD 190 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCC-CEE--CTTSEEEEE-BC
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccc-eEE--cCCCCEEEE-EC
Confidence 99888887665 6777888778888874 56999999999999988876555432 333 455676664 33
Q ss_pred CC----------CcEEEEeeCCcceE-Eeecc-ccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEE--EeC-CC
Q 020784 237 QK----------GQVRVEHYASKRTK-FIMAH-DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE--ECC-PS 301 (321)
Q Consensus 237 ~d----------g~V~i~d~~~~~~~-~l~~H-~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~--~~~-g~ 301 (321)
.+ +.|.++|..+..+. .+... ...++.++|+|++++|..+.. + |.+||+.++++... +.. +.
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~-v~~~d~~t~~~~~~~~~~~~~~ 267 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D-IWRMPVEADRVPVRPFLEFRDT 267 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S-EEEEETTCSSCCSSCSBCCCSS
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E-EEEEECCCCceeeeeeecCCCC
Confidence 33 68989998766543 44322 346899999999998877654 7 99999999886421 111 23
Q ss_pred cceeEEEeecCceEEEe
Q 020784 302 ISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 302 ~~~~~~~s~d~~~la~~ 318 (321)
....+++.+++.+|-++
T Consensus 268 ~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 268 KYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp CEEEEEECTTTCCEEEE
T ss_pred ceEEEEEcCCCCeEEEE
Confidence 34455667656666554
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.40 E-value=7.6e-12 Score=125.00 Aligned_cols=216 Identities=13% Similarity=0.025 Sum_probs=137.4
Q ss_pred EEEEEcCCCCEEEEEcCC----------cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcE
Q 020784 89 LHISFNQDHGCFAAGTDH----------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 89 ~~v~fs~dg~~lasg~~~----------gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v 158 (321)
..++|||||++|+.++++ .+.+||+++++...... +.+.+....|+++++.++.+. ++.|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~--~~~~~~~~~~SPdG~~la~~~--------~~~i 134 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER--IPNNTQWVTWSPVGHKLAYVW--------NNDI 134 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC--CCTTEEEEEECSSTTCEEEEE--------TTEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc--CCCcceeeEECCCCCEEEEEE--------CCeE
Confidence 458999999999988762 24599999886532111 356788999999999999886 5789
Q ss_pred EEEeCCCCcEEEEEeeCC---ce-----------------eEEEEeCCe--EEEEE-C-C--------------------
Q 020784 159 MIWDDHQSRCIGELSFRS---EV-----------------RSVKLRRDR--IIVVL-E-Q-------------------- 194 (321)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~---~v-----------------~~v~~~~~~--~~~~~-~-~-------------------- 194 (321)
.+||..+++... +...+ .+ .++.|+++. ++... + .
T Consensus 135 ~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 135 YVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp EEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred EEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 999998887543 22211 12 247788764 33321 0 1
Q ss_pred ---------------EEEEEEcCC---cE--EEEEEec------cCCCCceEEEeeCCCceEEEee---cCCCCcEEEEe
Q 020784 195 ---------------KIFVYNFAD---LK--LLHQIET------IANPKGLCAVSQGVGSLVLVCP---GLQKGQVRVEH 245 (321)
Q Consensus 195 ---------------~I~iwd~~~---~~--~~~~l~~------~~~~~~~~~~s~~~d~~~la~s---Gs~dg~V~i~d 245 (321)
+|++||+.+ ++ ....+.. +...+...++++ |+.++++. +..+..|.+||
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp--dg~~~~~~~~r~~~~~~i~~~d 291 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT--QERISLQWLRRIQNYSVMDICD 291 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE--TTEEEEEEEESSTTEEEEEEEE
T ss_pred eeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC--CCeEEEEEeCCCCCEEEEEEEE
Confidence 588899987 62 2233432 222233445555 55655432 22334688899
Q ss_pred eCCcc-------eEEe--ecccccee-----EEEECCCCCEEE-EEeCC-C-cEEEEEEcCCCcEEEEEeCCCcceeEEE
Q 020784 246 YASKR-------TKFI--MAHDSRIA-----CFALTQDGQLLA-TSSTK-G-TLVRIFNTLDGTLLQEECCPSISAQSGL 308 (321)
Q Consensus 246 ~~~~~-------~~~l--~~H~~~V~-----~vafspdg~~la-s~S~D-g-t~IrIWd~~tg~~i~~~~~g~~~~~~~~ 308 (321)
..++. ...+ ..|...|. .++|+|||+.|+ ..|++ | ..|.+||+.+++.. .+..+.......+
T Consensus 292 ~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~ 370 (740)
T 4a5s_A 292 YDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIE 370 (740)
T ss_dssp EETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEE
T ss_pred CCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEE
Confidence 87754 2223 55776665 889999999887 77643 3 23888898877654 4545544444345
Q ss_pred eecCceEEEe
Q 020784 309 WLSSAWLRVL 318 (321)
Q Consensus 309 s~d~~~la~~ 318 (321)
++|+++|+..
T Consensus 371 ~~d~~~i~f~ 380 (740)
T 4a5s_A 371 ALTSDYLYYI 380 (740)
T ss_dssp EECSSEEEEE
T ss_pred EEeCCEEEEE
Confidence 5778777654
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.39 E-value=2e-10 Score=103.42 Aligned_cols=199 Identities=10% Similarity=0.049 Sum_probs=138.3
Q ss_pred CCcEEEEEecCCceeEEeeee-----cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCcee
Q 020784 105 DHGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVR 179 (321)
Q Consensus 105 ~~gv~vw~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~ 179 (321)
+.++.+||.++++........ .+.....+.+ +++.+.++.. .++.|.+||.++++.+.++.....+.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~------~~~~v~viD~~t~~~~~~i~~~~~p~ 87 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVN------NSHVIFAIDINTFKEVGRITGFTSPR 87 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEG------GGTEEEEEETTTCCEEEEEECCSSEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEc------CCCEEEEEECcccEEEEEcCCCCCCc
Confidence 356889999887653221000 0122333443 3445554442 35899999999999988887667788
Q ss_pred EEEEe-CCeEEEEE--CCEEEEEEcCCcEEEEEEeccC------CCCceEEEeeCCCceEEEeecC-CCCcEEEEeeCCc
Q 020784 180 SVKLR-RDRIIVVL--EQKIFVYNFADLKLLHQIETIA------NPKGLCAVSQGVGSLVLVCPGL-QKGQVRVEHYASK 249 (321)
Q Consensus 180 ~v~~~-~~~~~~~~--~~~I~iwd~~~~~~~~~l~~~~------~~~~~~~~s~~~d~~~la~sGs-~dg~V~i~d~~~~ 249 (321)
.+.++ ...++++. ++.|.+||..+++...++.... .+.. +++ + ++.++++ .. .++.|.++|..+.
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~-i~~--~-~~~lyv~-~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQ-MVQ--Y-GKYVYVN-CWSYQNRILKIDTETD 162 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCC-EEE--E-TTEEEEE-ECTTCCEEEEEETTTT
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcce-EEE--E-CCEEEEE-cCCCCCEEEEEECCCC
Confidence 89984 45666766 5799999999999988887655 4443 333 2 3355553 43 4789999998876
Q ss_pred ceE-EeeccccceeEEEECCCCCEEEEEeCC----------CcEEEEEEcCCCcEEEEEeC--CCcceeEEEeecCceEE
Q 020784 250 RTK-FIMAHDSRIACFALTQDGQLLATSSTK----------GTLVRIFNTLDGTLLQEECC--PSISAQSGLWLSSAWLR 316 (321)
Q Consensus 250 ~~~-~l~~H~~~V~~vafspdg~~las~S~D----------gt~IrIWd~~tg~~i~~~~~--g~~~~~~~~s~d~~~la 316 (321)
.+. .+.. ......++++|+|++++++..+ +. |.+||..++++..++.. +.....+++++|+++|.
T Consensus 163 ~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 163 KVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLY 240 (328)
T ss_dssp EEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEE
T ss_pred eEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEE
Confidence 543 4433 3456889999999988877655 67 99999999999888865 44566778888898887
Q ss_pred Ee
Q 020784 317 VL 318 (321)
Q Consensus 317 ~~ 318 (321)
++
T Consensus 241 v~ 242 (328)
T 3dsm_A 241 WI 242 (328)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.38 E-value=1.6e-10 Score=114.82 Aligned_cols=229 Identities=9% Similarity=0.011 Sum_probs=145.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-C-----cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCC------
Q 020784 84 PPPTLLHISFNQDHGCFAAGTD-H-----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP------ 151 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~-~-----gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~------ 151 (321)
+...+..++|||||++||.+.+ + .+++||+++++....... ...+..+.|+++++.++.++.....
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc--CcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3346889999999999996654 2 578999998876432211 2235567899999999888733210
Q ss_pred ---CCCCCcEEEEeCCCCcE--EEEEee---CCceeEEEEeCCe--EEEEE------CCEEEEEEcCC------cE-EEE
Q 020784 152 ---QYPLNKVMIWDDHQSRC--IGELSF---RSEVRSVKLRRDR--IIVVL------EQKIFVYNFAD------LK-LLH 208 (321)
Q Consensus 152 ---~~~d~~v~iWD~~~~~~--~~~~~~---~~~v~~v~~~~~~--~~~~~------~~~I~iwd~~~------~~-~~~ 208 (321)
......|++|++.+++. ...+.. ...+..+.|+++. +++.. ...|++||+.+ ++ .++
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 00124599999988762 222222 2246788898864 44433 35899999975 42 345
Q ss_pred EEeccCCCCceEEEeeCCCceEEEeecCC---CCcEEEEeeCCcc---eEEeecccc--ceeEEEECCCCCEEEEEeCCC
Q 020784 209 QIETIANPKGLCAVSQGVGSLVLVCPGLQ---KGQVRVEHYASKR---TKFIMAHDS--RIACFALTQDGQLLATSSTKG 280 (321)
Q Consensus 209 ~l~~~~~~~~~~~~s~~~d~~~la~sGs~---dg~V~i~d~~~~~---~~~l~~H~~--~V~~vafspdg~~las~S~Dg 280 (321)
.+..+.... ...++++++ .|++.+.. ++.|.+|+..+.. ...+..|.. .+..++|++++.++++...|+
T Consensus 281 ~l~~~~~~~-~~~~s~dg~--~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 281 KLIDNFEGE-YDYVTNEGT--VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEECSSSSC-EEEEEEETT--EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred EeeCCCCcE-EEEEeccCC--EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 565554433 234666543 33333333 3467778887643 356666654 688899998888999999888
Q ss_pred c-EEEEEEcCCCcEEEEEeCCCcceeE--EEeecCceEEEe
Q 020784 281 T-LVRIFNTLDGTLLQEECCPSISAQS--GLWLSSAWLRVL 318 (321)
Q Consensus 281 t-~IrIWd~~tg~~i~~~~~g~~~~~~--~~s~d~~~la~~ 318 (321)
. .|++||+.+|+.++++... ..... .+++++..|++.
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~-~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLE-VGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCC-SSEEEEEECCTTCSEEEEE
T ss_pred EEEEEEEECCCCCEEEecCCC-CceEEEEecCCCCCEEEEE
Confidence 5 1566787789988887543 33333 445677766653
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.35 E-value=2.4e-10 Score=102.89 Aligned_cols=196 Identities=11% Similarity=0.067 Sum_probs=131.6
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCc-eeEEeee--------ecCCceEEEEEec-CCCeEEEEeCCCCCCCC
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFR-EIFRRDF--------ERGGGIGVVEMLF-RCNILALVGGGPDPQYP 154 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~-~~~~~~~--------~~~~~v~~v~~~~-~~~~~~~~sg~~~~~~~ 154 (321)
.....++|+++|+++++... +.|++|+.+... .+..... .+-.....+++.+ +++++++-+. .
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~------~ 164 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY------C 164 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS------S
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC------C
Confidence 47889999999998888876 558899875432 2222210 0112456778877 5555544321 2
Q ss_pred CCcEEEEeCCCCcEEEEEeeC-----------CceeEEEEeCC--eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCce
Q 020784 155 LNKVMIWDDHQSRCIGELSFR-----------SEVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGL 219 (321)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~-----------~~v~~v~~~~~--~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~ 219 (321)
++.|++|| .++..+..+... ..+..++++++ .++++. ++.|++||..+++.+.++.........
T Consensus 165 ~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 165 NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 48899999 567776666422 13788999875 566664 359999999988988888643322233
Q ss_pred EEEeeCCCceEEEee------cCCCCcEEEEeeCCcceE-Ee---eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 020784 220 CAVSQGVGSLVLVCP------GLQKGQVRVEHYASKRTK-FI---MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 220 ~~~s~~~d~~~la~s------Gs~dg~V~i~d~~~~~~~-~l---~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~ 289 (321)
.++...+ +.+++.. ...++.|++|+..++.+. .+ .+|-..+..|+|+|+|.++++.+.+++ |++|++.
T Consensus 244 ~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~-I~~~~~~ 321 (329)
T 3fvz_A 244 FAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNT-VWKFTLT 321 (329)
T ss_dssp EEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCC-EEEEEEE
T ss_pred ceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCE-EEEEeCC
Confidence 3333333 2333322 344568999998776644 44 467788999999999999999998999 9999975
Q ss_pred C
Q 020784 290 D 290 (321)
Q Consensus 290 t 290 (321)
.
T Consensus 322 ~ 322 (329)
T 3fvz_A 322 E 322 (329)
T ss_dssp E
T ss_pred c
Confidence 3
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.33 E-value=1e-09 Score=100.24 Aligned_cols=207 Identities=10% Similarity=0.037 Sum_probs=127.8
Q ss_pred CCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCC---CCCCCcEEEEeCCCCcEEEEEeeC------
Q 020784 105 DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP---QYPLNKVMIWDDHQSRCIGELSFR------ 175 (321)
Q Consensus 105 ~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~---~~~d~~v~iWD~~~~~~~~~~~~~------ 175 (321)
++.|.+||..+++.+..... +....+.++++++.+.++...... .-.+++|.+||..+++.+.++...
T Consensus 30 d~~v~v~D~~t~~~~~~i~~---g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPT---AFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GCEEEEEETTTCCEEEEEEC---CEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred cCeEEEEECCCCeEEEEecC---CCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 34688999988877655442 323378889999988887520000 002477999999999988887653
Q ss_pred -CceeEEEEeCC--eEEEEE---CCEEEEEEcCCcEEEEE-EeccCC------C---CceEEEeeCCCceEEEee-----
Q 020784 176 -SEVRSVKLRRD--RIIVVL---EQKIFVYNFADLKLLHQ-IETIAN------P---KGLCAVSQGVGSLVLVCP----- 234 (321)
Q Consensus 176 -~~v~~v~~~~~--~~~~~~---~~~I~iwd~~~~~~~~~-l~~~~~------~---~~~~~~s~~~d~~~la~s----- 234 (321)
..+..+.++++ .++++. ++.|.+||+.+++.+.+ +..... + ....+++. |+.++.+.
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~--dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICG--DGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEET--TSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECC--CCcEEEEEECCCC
Confidence 34667888765 466653 36899999999988877 432110 0 00111111 11111110
Q ss_pred --------------------------------cCCCCcEEEEeeCCcceEEeec---------c----ccceeEEEECCC
Q 020784 235 --------------------------------GLQKGQVRVEHYASKRTKFIMA---------H----DSRIACFALTQD 269 (321)
Q Consensus 235 --------------------------------Gs~dg~V~i~d~~~~~~~~l~~---------H----~~~V~~vafspd 269 (321)
.+.+|.|.++|+.......... + .....-++|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 1223445555543322111110 0 011223799999
Q ss_pred CCEEEEEeC-----------CCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 270 GQLLATSST-----------KGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 270 g~~las~S~-----------Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
+.++..+.. .++ |.+||+.+++.++++..+. ...+.+++||++|+++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~-v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~ 322 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAE-IWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTL 322 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSE-EEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEE
T ss_pred CCeEEEEEccCCCcccccCCCce-EEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEe
Confidence 776665532 346 9999999999999998888 7788999999999875
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=9.9e-10 Score=96.68 Aligned_cols=208 Identities=13% Similarity=0.084 Sum_probs=143.0
Q ss_pred CCCEEEEEcCCc-EEEEEecCCceeEEeeeecC-CceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEe
Q 020784 96 DHGCFAAGTDHG-FRIYNCDPFREIFRRDFERG-GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (321)
Q Consensus 96 dg~~lasg~~~g-v~vw~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~ 173 (321)
.+++|++++.++ |.+||.++++.+..... +. ..+..+.+.+++++++ + .++.|..||. +++.+.++.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~-~~~~~~~~~~~~pdG~ilv--s-------~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILF--S-------YSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC-CTTCCCCEEEECTTSCEEE--E-------CBSEEEEECT-TSCEEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC-CccCCCcCeEECCCCCEEE--e-------CCCCEEEECC-CCCEEEEEc
Confidence 467788888754 78999999998877664 22 3567778889998777 3 2478999999 899888888
Q ss_pred eC--CceeEEEEeCCe-EEEE-EC--CEEEEEEcCCcEEEEEEeccCC---C-CceEEEeeCCCceEEEeecCCCCcEEE
Q 020784 174 FR--SEVRSVKLRRDR-IIVV-LE--QKIFVYNFADLKLLHQIETIAN---P-KGLCAVSQGVGSLVLVCPGLQKGQVRV 243 (321)
Q Consensus 174 ~~--~~v~~v~~~~~~-~~~~-~~--~~I~iwd~~~~~~~~~l~~~~~---~-~~~~~~s~~~d~~~la~sGs~dg~V~i 243 (321)
.. ..+.++.+.++. ++++ .+ +.|..+|. +++.+.++..... . .....+...+++.+++ +...++.|..
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv-~~~~~~~v~~ 150 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLV-PLFATSEVRE 150 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEE-EETTTTEEEE
T ss_pred CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEE-EecCCCEEEE
Confidence 65 367777777654 3333 33 35666664 6788877753211 0 0111223455667777 4788899999
Q ss_pred EeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC-c------ceeEEEeecCceEE
Q 020784 244 EHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS-I------SAQSGLWLSSAWLR 316 (321)
Q Consensus 244 ~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~-~------~~~~~~s~d~~~la 316 (321)
+|...+.+.++..+ ..+.++.+.++|.++++++.++. |..||..+|+.+.++.... . ........+|..++
T Consensus 151 ~d~~G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~-v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v 228 (276)
T 3no2_A 151 IAPNGQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC-FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI 228 (276)
T ss_dssp ECTTSCEEEEEECS-SCCCEEEECTTSCEEEECBTTSE-EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred ECCCCCEEEEEECC-CCccceeEcCCCCEEEEeCCCCe-EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEE
Confidence 99884445566554 46778899999999998888888 9999999999999886321 1 12234456676665
Q ss_pred Ee
Q 020784 317 VL 318 (321)
Q Consensus 317 ~~ 318 (321)
..
T Consensus 229 ~~ 230 (276)
T 3no2_A 229 CN 230 (276)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.31 E-value=6.1e-09 Score=100.82 Aligned_cols=196 Identities=13% Similarity=0.119 Sum_probs=140.0
Q ss_pred cCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC--CCcEEE
Q 020784 94 NQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH--QSRCIG 170 (321)
Q Consensus 94 s~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~--~~~~~~ 170 (321)
++++.++++..+ +.|.++|.++.+.+..... +.....+.++++++.+.+++ .++.|.+||+. +++.+.
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr~lyv~~-------~dg~V~viD~~~~t~~~v~ 234 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGRYLFVIG-------RDGKVNMIDLWMKEPTTVA 234 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEE-------TTSEEEEEETTSSSCCEEE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCCEEEEEc-------CCCeEEEEECCCCCCcEeE
Confidence 344556666666 4588999999988766654 44566788999999888876 46899999996 888888
Q ss_pred EEeeCCceeEEEEe----CC--eEEEEE--CCEEEEEEcCCcEEEEEEeccCC---------CCceEEEeeCCCceEEEe
Q 020784 171 ELSFRSEVRSVKLR----RD--RIIVVL--EQKIFVYNFADLKLLHQIETIAN---------PKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 171 ~~~~~~~v~~v~~~----~~--~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~---------~~~~~~~s~~~d~~~la~ 233 (321)
++........+.++ ++ .++++. .++|.++|..+++.++++..... ...+..+...+++..+++
T Consensus 235 ~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 235 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred EEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 88877778899998 34 455553 57999999999999998865321 112333333333333333
Q ss_pred ecCCCCcEEEEeeCCcc-eE-EeeccccceeEEEECCCCCEEEEEe-CCCcEEEEEEcCCCcEEEEEeC
Q 020784 234 PGLQKGQVRVEHYASKR-TK-FIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~-~~-~l~~H~~~V~~vafspdg~~las~S-~Dgt~IrIWd~~tg~~i~~~~~ 299 (321)
.-...|.|.+.|+.... +. .-.........+.|+|+|++|.++. .+++ |.++|+.+++++..+..
T Consensus 315 ~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~-V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 315 NVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK-LVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEEC
T ss_pred EecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCe-EEEEECCCCcEEEEEec
Confidence 45778899998876542 22 1122345577899999999887665 4566 99999999999998877
No 184
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.30 E-value=1.9e-10 Score=112.91 Aligned_cols=224 Identities=10% Similarity=-0.007 Sum_probs=137.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEE--cCCc-EEEEEecCCceeEEeeeecCCceE---------EEEEe--cCCCe-EEEEeC
Q 020784 83 SPPPTLLHISFNQDHGCFAAG--TDHG-FRIYNCDPFREIFRRDFERGGGIG---------VVEML--FRCNI-LALVGG 147 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg--~~~g-v~vw~~~~~~~~~~~~~~~~~~v~---------~v~~~--~~~~~-~~~~sg 147 (321)
.|...|..++|++++.+++.+ +.++ ..||.....+....... +...+. ...++ ++++. ++++..
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALP-APWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSC-TTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCC-CCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 355689999999988888877 4444 67998754444333332 222333 34444 78888 777653
Q ss_pred CCCCCCCCCcEEEEeCC--C-CcEEEEEee------CCceeEEEEeCCe--EEEEE-C----------CEEEEEEcCC--
Q 020784 148 GPDPQYPLNKVMIWDDH--Q-SRCIGELSF------RSEVRSVKLRRDR--IIVVL-E----------QKIFVYNFAD-- 203 (321)
Q Consensus 148 ~~~~~~~d~~v~iWD~~--~-~~~~~~~~~------~~~v~~v~~~~~~--~~~~~-~----------~~I~iwd~~~-- 203 (321)
. +..|.+||.. . ++. ..+.. ...+..+.|+++. ++.+. + ..|++||+.+
T Consensus 100 ~------~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 100 G------DQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp T------TCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred C------CCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 2 3567777765 3 443 33333 2367789999863 55443 2 3899999987
Q ss_pred ----cEEEEEEe-ccCCCCceEEEeeCCCceEEEeecCCC-------CcEEEEeeC-Cc---ceEEe-eccccceeEEEE
Q 020784 204 ----LKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQK-------GQVRVEHYA-SK---RTKFI-MAHDSRIACFAL 266 (321)
Q Consensus 204 ----~~~~~~l~-~~~~~~~~~~~s~~~d~~~la~sGs~d-------g~V~i~d~~-~~---~~~~l-~~H~~~V~~vaf 266 (321)
++. ..+. .+.......+++ +|+..|++..... ..|.+|++. ++ ....+ .+|...+..++|
T Consensus 173 ~~~~~~~-~~l~~~~~~~~~~~~~S--pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~ 249 (662)
T 3azo_A 173 AADRSAV-RELSDDAHRFVTGPRLS--PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEW 249 (662)
T ss_dssp TTCGGGS-EESSCSCSSEECCCEEC--TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEE
T ss_pred cccCCce-eEEEecCCCcccCceEC--CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEE
Confidence 543 3443 333323334454 5667777533222 378889998 45 44444 456789999999
Q ss_pred CCCCCEEEEEeCCCc-EEEEEEcCCCcEEEEEeCCCcc----------eeEEEeecCceEEEe
Q 020784 267 TQDGQLLATSSTKGT-LVRIFNTLDGTLLQEECCPSIS----------AQSGLWLSSAWLRVL 318 (321)
Q Consensus 267 spdg~~las~S~Dgt-~IrIWd~~tg~~i~~~~~g~~~----------~~~~~s~d~~~la~~ 318 (321)
+|||+++++++.|+. .|.+||+.++++.. +..++.. ..+.+++++++++.+
T Consensus 250 spdg~l~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 250 APDGSLIVATDRTGWWNLHRVDPATGAATQ-LCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp CTTSCEEEEECTTSSCEEEEECTTTCCEEE-SSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred CCCCeEEEEECCCCCeEEEEEECCCCceee-cccccccccCccccccCceEeEeCCCEEEEEE
Confidence 999998888888884 15555666777643 3222221 134556677777654
No 185
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.28 E-value=3.5e-10 Score=104.17 Aligned_cols=168 Identities=9% Similarity=0.092 Sum_probs=121.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCc-----------eeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCC
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFR-----------EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~-----------~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d 155 (321)
+++.+++++...+|++|+.++++||+++..+ ......+ .+ +..+++ +++.++++. +
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~l--p~-V~~l~f--d~~~L~v~~--------~ 105 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEI--PD-VIFVCF--HGDQVLVST--------R 105 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEEC--TT-EEEEEE--ETTEEEEEE--------S
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeC--CC-eeEEEE--CCCEEEEEc--------C
Confidence 6888999999999999999999999875443 1122232 45 888887 788887763 4
Q ss_pred CcEEEEeCCCCcEEEEE-eeCCceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 156 NKVMIWDDHQSRCIGEL-SFRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
+.|++||+.+....... .+...+.++.+.+..+++++ ++.|.+||+.+++..+ +. . .+.+++++++| +++
T Consensus 106 ~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~~---~--~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 106 NALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-LA---Q--NVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-EE---E--SEEEEEECSSE--EEE
T ss_pred CcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-cc---C--CceEEEEcCCc--eEE
Confidence 88999998876543333 34456777777665566665 5799999998777643 22 2 35556666666 342
Q ss_pred ecCCCCcEEEEeeCCcc---eEEe------e---ccccceeEEEECCCCCEEEEE
Q 020784 234 PGLQKGQVRVEHYASKR---TKFI------M---AHDSRIACFALTQDGQLLATS 276 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~---~~~l------~---~H~~~V~~vafspdg~~las~ 276 (321)
|..||++++|+..+.. ..++ . +|...|.+|+|.+++.+|++-
T Consensus 178 -g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 178 -LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp -EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred -EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 7889999999887766 3355 3 478899999999999999884
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.27 E-value=4.3e-09 Score=92.99 Aligned_cols=221 Identities=9% Similarity=0.036 Sum_probs=135.8
Q ss_pred CeEEEEEcCCCCEEEE-------Ec-CCcEEEEEecCCceeEEeee---ecCCceEEEEEecCCCeEEEEeCCCCCCCCC
Q 020784 87 TLLHISFNQDHGCFAA-------GT-DHGFRIYNCDPFREIFRRDF---ERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (321)
Q Consensus 87 ~V~~v~fs~dg~~las-------g~-~~gv~vw~~~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d 155 (321)
...+++|+++|+++++ +. ++++.+||..+++......- .+...+..+.+..+...+.++. ..
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-------~~ 91 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-------MR 91 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-------TT
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-------CC
Confidence 4678999999998877 33 46688998777664322110 0124466667766623344444 23
Q ss_pred CcEEEEeCCCCcEEEE-Eee-----CCceeEEEEeCCe-EEEEEC-----------------CEEEEEEcCCcEEEEEEe
Q 020784 156 NKVMIWDDHQSRCIGE-LSF-----RSEVRSVKLRRDR-IIVVLE-----------------QKIFVYNFADLKLLHQIE 211 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~~-~~~-----~~~v~~v~~~~~~-~~~~~~-----------------~~I~iwd~~~~~~~~~l~ 211 (321)
+.|.+||.+ ++.... ... ...+..+.+.++. ++++.. +.|..||.. ++......
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 579999998 765432 221 1247788888754 555543 356666655 54433322
Q ss_pred ccCCCCceEEEe--eCCCceEEEeecCCCCcEEEEeeC-Ccce------EEeeccc-cceeEEEECCCCCEEEEEeCCCc
Q 020784 212 TIANPKGLCAVS--QGVGSLVLVCPGLQKGQVRVEHYA-SKRT------KFIMAHD-SRIACFALTQDGQLLATSSTKGT 281 (321)
Q Consensus 212 ~~~~~~~~~~~s--~~~d~~~la~sGs~dg~V~i~d~~-~~~~------~~l~~H~-~~V~~vafspdg~~las~S~Dgt 281 (321)
.... ...++++ .++++..+.++...++.|.+|+.. .+.+ ..+..+. ..+..++++++|.++++...++.
T Consensus 170 ~~~~-~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 170 AFQF-PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EESS-EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred CCCC-cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 2211 1233444 115655444345667889998865 3321 2334444 67899999999999998877888
Q ss_pred EEEEEEcCCCcEEEEEeCC-CcceeEEEeecCceEEEe
Q 020784 282 LVRIFNTLDGTLLQEECCP-SISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 282 ~IrIWd~~tg~~i~~~~~g-~~~~~~~~s~d~~~la~~ 318 (321)
|.+||..+|+.+..+... .....+.++.++++|.++
T Consensus 249 -i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~ 285 (314)
T 1pjx_A 249 -IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT 285 (314)
T ss_dssp -EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred -EEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEE
Confidence 999999988877777544 234455667888866654
No 187
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=2e-10 Score=105.82 Aligned_cols=169 Identities=14% Similarity=0.140 Sum_probs=118.7
Q ss_pred ceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc-----------EEEEEeeCCceeEEEEeCCeEEEEECCEEE
Q 020784 129 GIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR-----------CIGELSFRSEVRSVKLRRDRIIVVLEQKIF 197 (321)
Q Consensus 129 ~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~-----------~~~~~~~~~~v~~v~~~~~~~~~~~~~~I~ 197 (321)
.+..++++....++++++ ...+++|+++..+ ....+.+.. |+.+.|....++++.++.|+
T Consensus 39 ~~nlLais~~~gll~a~~--------~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAAS--------GSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVSTRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEE--------TTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEEESSEEE
T ss_pred cccEEEEcCCCCEEEEeC--------CCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEEcCCcEE
Confidence 577888888888887776 2478889864332 123445666 99999977788888788999
Q ss_pred EEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEe
Q 020784 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS 277 (321)
Q Consensus 198 iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S 277 (321)
+||+++......+..+... +..+.+-+. . +|+ ++.||.|.+|++..+.... +...|+|++|||+| ++.|.
T Consensus 110 v~dv~sl~~~~~~~~~~~~--v~~i~~~~p-~-~av-~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~ 179 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKP--VFQLKNVNN-T-LVI-LNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLL 179 (388)
T ss_dssp EEESSSTTCEEEEEECSSC--EEEEEECSS-E-EEE-EETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEE
T ss_pred EEEchhhhccCccceeecc--eeeEEecCC-C-EEE-EECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEE
Confidence 9999776555555555433 344444433 2 442 6889999999998665433 56789999999999 67788
Q ss_pred CCCcEEEEEEcCCCcE--EEEE------eC--CCcceeEEE--eecCceEEE
Q 020784 278 TKGTLVRIFNTLDGTL--LQEE------CC--PSISAQSGL--WLSSAWLRV 317 (321)
Q Consensus 278 ~Dgt~IrIWd~~tg~~--i~~~------~~--g~~~~~~~~--s~d~~~la~ 317 (321)
.||+ |++|+...+++ .+++ .. ++.....++ ..+++||++
T Consensus 180 ~dg~-i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 180 KDRS-FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TTSC-EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCc-EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 8999 99999988886 6666 21 234444444 455677754
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.24 E-value=1.6e-08 Score=92.86 Aligned_cols=218 Identities=10% Similarity=-0.079 Sum_probs=139.2
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEEecCCceeEEeeee------cCCceEEEEEecCCCeEEEEeCCCCCC
Q 020784 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFE------RGGGIGVVEMLFRCNILALVGGGPDPQ 152 (321)
Q Consensus 90 ~v~fs~dg~~lasg~-----------~~gv~vw~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~~~~sg~~~~~ 152 (321)
.++|+|||++|+++. ++.|.+||..+.+........ +...-..+.++++++.+.++...
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~---- 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA---- 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----
Confidence 799999999998875 245779999888766554430 01123356788999988887632
Q ss_pred CCCCcEEEEeCCCCcEEEE-EeeCCceeEEEEeCCeEE-EEECCEEEEEEcCCcEEEEEEe-----ccCCCCc-eEEEee
Q 020784 153 YPLNKVMIWDDHQSRCIGE-LSFRSEVRSVKLRRDRII-VVLEQKIFVYNFADLKLLHQIE-----TIANPKG-LCAVSQ 224 (321)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~-~~~~~~v~~v~~~~~~~~-~~~~~~I~iwd~~~~~~~~~l~-----~~~~~~~-~~~~s~ 224 (321)
.++.|.++| .+++.+.+ +.....+......+..++ .+.++++.++|. +++.+.... ....+.. ...+..
T Consensus 146 -~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 146 -AGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred -CCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 247899999 99998887 665544322222223333 334679999999 777664332 1111111 123344
Q ss_pred CCCceEEEeecCCCCcEEEEeeCCcceE---Eeec----------cccceeEEEECCCCCEEEEEeC----------CCc
Q 020784 225 GVGSLVLVCPGLQKGQVRVEHYASKRTK---FIMA----------HDSRIACFALTQDGQLLATSST----------KGT 281 (321)
Q Consensus 225 ~~d~~~la~sGs~dg~V~i~d~~~~~~~---~l~~----------H~~~V~~vafspdg~~las~S~----------Dgt 281 (321)
+++ .++.. +..|.|.+.|....... .+.- .......++|+|||..|..+.. .+.
T Consensus 223 ~~~-~~~~~--~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~ 299 (373)
T 2mad_H 223 KSG-RIVWP--VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKE 299 (373)
T ss_pred cCC-EEEEE--cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCe
Confidence 433 33332 35678888887544222 2211 1122445889999887666543 346
Q ss_pred EEEEEEcCCCcEEEEEeCCCcceeEEEeecCc-eEEEe
Q 020784 282 LVRIFNTLDGTLLQEECCPSISAQSGLWLSSA-WLRVL 318 (321)
Q Consensus 282 ~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~-~la~~ 318 (321)
|.|+|+.+++.++++..+.....+.+++||+ .|.++
T Consensus 300 -V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 300 -VTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred -EEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEE
Confidence 9999999999999998888888889999999 55554
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.24 E-value=4.3e-10 Score=111.51 Aligned_cols=226 Identities=11% Similarity=-0.025 Sum_probs=136.6
Q ss_pred CCCCeEEEEEcCCCCEEE-----EEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCC------
Q 020784 84 PPPTLLHISFNQDHGCFA-----AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP------ 151 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~la-----sg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~------ 151 (321)
|...+.+++|||||++|| .|++ ..|++||+++++....... .......+.|++++..++.++.....
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 444689999999999999 3433 3488999998875301111 11112567899999998888732100
Q ss_pred CCCCCcEEEEeCCCCcE--EEEEee--C-CceeEEEEeCCe--EEEEE-CC----EEEEEEcCCcEEEEEEeccCCCCce
Q 020784 152 QYPLNKVMIWDDHQSRC--IGELSF--R-SEVRSVKLRRDR--IIVVL-EQ----KIFVYNFADLKLLHQIETIANPKGL 219 (321)
Q Consensus 152 ~~~d~~v~iWD~~~~~~--~~~~~~--~-~~v~~v~~~~~~--~~~~~-~~----~I~iwd~~~~~~~~~l~~~~~~~~~ 219 (321)
......|++|++.++.. ...+.. + ..+..+.|+++. +++.. ++ .|.+|+..+++. +.+..+......
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~ 276 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYE 276 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEE
Confidence 00123499999988762 222222 2 357788998864 44432 33 677777655543 444443332222
Q ss_pred EEEeeCCCceEEEeecC---CCCcEEEEeeCCcc---eEEeecc--ccceeEEEECCCCCEEEEEeCCCcEEEEEEcC-C
Q 020784 220 CAVSQGVGSLVLVCPGL---QKGQVRVEHYASKR---TKFIMAH--DSRIACFALTQDGQLLATSSTKGTLVRIFNTL-D 290 (321)
Q Consensus 220 ~~~s~~~d~~~la~sGs---~dg~V~i~d~~~~~---~~~l~~H--~~~V~~vafspdg~~las~S~Dgt~IrIWd~~-t 290 (321)
. +.+++ .+++. .. .++.|.+|++.+.. ...+..| ...|..++|+ ++.++++.+.|+. .+||.+. +
T Consensus 277 ~-~~~~g--~l~~~-s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~ 350 (695)
T 2bkl_A 277 V-HAWKD--RFYVL-TDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT-SEVRVATLK 350 (695)
T ss_dssp E-EEETT--EEEEE-ECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE-EEEEEEETT
T ss_pred E-EecCC--cEEEE-ECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCC
Confidence 2 23443 34442 33 35788889986543 2444444 4568889998 7889999999998 8999775 5
Q ss_pred CcEEEEEeCCCccee--EEEeecCceEEE
Q 020784 291 GTLLQEECCPSISAQ--SGLWLSSAWLRV 317 (321)
Q Consensus 291 g~~i~~~~~g~~~~~--~~~s~d~~~la~ 317 (321)
|+.++++........ +.+++|++.|++
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~ 379 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYY 379 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEE
Confidence 777776643222222 244567776664
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.23 E-value=1.9e-08 Score=97.36 Aligned_cols=219 Identities=13% Similarity=0.032 Sum_probs=146.7
Q ss_pred CeEEEEEcCCCCEEEEEcCC-cEEEEEec--CCceeEEeeeecCCceEEEEEe----cCCCeEEEEeCCCCCCCCCCcEE
Q 020784 87 TLLHISFNQDHGCFAAGTDH-GFRIYNCD--PFREIFRRDFERGGGIGVVEML----FRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~-gv~vw~~~--~~~~~~~~~~~~~~~v~~v~~~----~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
.+.++.|+|||++|++++.+ .|.+||+. +.+.+..... +..-..++++ ++++.++++.. .+++|.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~------~~~~v~ 269 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAY------WPPQYV 269 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEE------ETTEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEc------cCCeEE
Confidence 57799999999999888775 57899995 6666554442 4455677888 58888877763 468999
Q ss_pred EEeCCCCcEEEEEeeCC------------ceeEEEEeCC--eEEEEE--CCEEEEEEcCCcEEEE--EEeccCCCCceEE
Q 020784 160 IWDDHQSRCIGELSFRS------------EVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLLH--QIETIANPKGLCA 221 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~~------------~v~~v~~~~~--~~~~~~--~~~I~iwd~~~~~~~~--~l~~~~~~~~~~~ 221 (321)
|+|..+.+.+..+.... .+..+..+++ .+++.. .++|.++|..+.+.+. .+... .....
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~---~~~~d 346 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE---RFLHD 346 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC---SSEEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc---ccccC
Confidence 99999999888765421 3556666543 333333 3699999987653322 23221 12334
Q ss_pred EeeCCCceEEEeecCCCCcEEEEeeCCcceE-Eee-----ccccceeEEE-ECCC-CCEEEEEe-CCCcEEEEEEcCC--
Q 020784 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIM-----AHDSRIACFA-LTQD-GQLLATSS-TKGTLVRIFNTLD-- 290 (321)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~-~l~-----~H~~~V~~va-fspd-g~~las~S-~Dgt~IrIWd~~t-- 290 (321)
+.+++++.++.++...++.|.++|..++.+. .+. .|-+ +.+. ++|+ |..++|+. .+++ |.|+|+.+
T Consensus 347 ~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~~~g~~~-Vsvid~~~~~ 423 (567)
T 1qks_A 347 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPG--RGANFVHPTFGPVWATSHMGDDS-VALIGTDPEG 423 (567)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCT--TCEEEEETTTEEEEEEEBSSSSE-EEEEECCTTT
T ss_pred ceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCc--cceeeECCCCCcEEEeCCCCCCe-EEEecCCCCC
Confidence 4556677766555566789999999877643 232 2432 2222 5787 55556654 3578 99999998
Q ss_pred -----CcEEEEEeCC-CcceeEEEeecCceEEEee
Q 020784 291 -----GTLLQEECCP-SISAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 291 -----g~~i~~~~~g-~~~~~~~~s~d~~~la~~~ 319 (321)
.+.++++... .....+.+++++++|-|..
T Consensus 424 ~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 424 HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred CccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 7789998753 3334567789999988864
No 191
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.23 E-value=1.4e-08 Score=89.84 Aligned_cols=217 Identities=8% Similarity=0.017 Sum_probs=137.1
Q ss_pred CeEEEEEcCCCC-EEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 87 TLLHISFNQDHG-CFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 87 ~V~~v~fs~dg~-~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
--.+..|++++. ++.+... +.|..||.++.+.. .... ...+..+.+.+++++++. . ++.|.+||.+
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~--~~~~~~i~~~~dG~l~v~-~--------~~~l~~~d~~ 81 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTM--DAPVSSVALRQSGGYVAT-I--------GTKFCALNWK 81 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEC--SSCEEEEEEBTTSSEEEE-E--------TTEEEEEETT
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeC--CCceEEEEECCCCCEEEE-E--------CCeEEEEECC
Confidence 345788999654 5555554 55889998876542 2332 567888888888884443 3 3679999998
Q ss_pred CCcEEEEEeeC-----CceeEEEEeCCe-EEEEE-----------CCEEEEEEcC-CcEEEEEEeccCCCCceEEEeeCC
Q 020784 165 QSRCIGELSFR-----SEVRSVKLRRDR-IIVVL-----------EQKIFVYNFA-DLKLLHQIETIANPKGLCAVSQGV 226 (321)
Q Consensus 165 ~~~~~~~~~~~-----~~v~~v~~~~~~-~~~~~-----------~~~I~iwd~~-~~~~~~~l~~~~~~~~~~~~s~~~ 226 (321)
+++........ ..+..+.+.++. +++++ .....+|.+. .++........ .. ...+..++
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~-~~--pngi~~sp 158 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV-DI--SNGLDWSL 158 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE-SB--EEEEEECT
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc-cc--ccceEEcC
Confidence 87754333221 246778888754 55543 1234555553 23332222221 11 22334445
Q ss_pred CceEEEeecCCCCcEEEEeeC--Ccce------EEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 227 GSLVLVCPGLQKGQVRVEHYA--SKRT------KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 227 d~~~la~sGs~dg~V~i~d~~--~~~~------~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
|+..+.++.+.++.|.++++. ++.+ ..+..+...+..++++++|.+.++...++. |.+||..+|+++.++.
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQTVK 237 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEEEEE
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEEEEE
Confidence 555554446777889888863 3322 133345567899999999998888877777 9999999999999887
Q ss_pred CCC-cceeEEEe-ecCceEEEee
Q 020784 299 CPS-ISAQSGLW-LSSAWLRVLR 319 (321)
Q Consensus 299 ~g~-~~~~~~~s-~d~~~la~~~ 319 (321)
... ....++|. +|++.|.+..
T Consensus 238 ~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 238 LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCceEEEEeCCCCCEEEEEc
Confidence 653 33445666 6777776654
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.18 E-value=2.8e-09 Score=95.26 Aligned_cols=195 Identities=12% Similarity=0.096 Sum_probs=123.6
Q ss_pred CCeEEEEEcCCCCEEEEEc-CCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~-~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
..|.+++|++++..++..+ ++.++.|.- +....... +......+.+.++++++++.. .++.|.+||.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~-------~~~~i~~~d~~ 74 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---EPWLEISK-KGLQLEGLNFDRQGQLFLLDV-------FEGNIFKINPE 74 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---EEEEEEES-SCCCEEEEEECTTSCEEEEET-------TTCEEEEECTT
T ss_pred cccceeeecCCccceeEEeecccCccccc---ceeEEEec-cCccccCcEECCCCCEEEEEC-------CCCEEEEEeCC
Confidence 3577888999887776554 466778832 22212221 234567778888877554444 45889999999
Q ss_pred CCcEEEEE-eeCCceeEEEEeCCe-EEEEEC------CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecC
Q 020784 165 QSRCIGEL-SFRSEVRSVKLRRDR-IIVVLE------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 165 ~~~~~~~~-~~~~~v~~v~~~~~~-~~~~~~------~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
+++..... .....+.++.++++. ++++.. +.|.+||..+++....+...........+..++++.+++. ..
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~-~~ 153 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFT-DF 153 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEE-EC
T ss_pred CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEE-ec
Confidence 88765544 334578999998764 555543 3899999987665433332222234555666667777663 32
Q ss_pred C------CCcEEEEeeCCcceEEeeccccceeEEEECCCCCEE-EEEeCCCcEEEEEEcCC-CcE
Q 020784 237 Q------KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLD-GTL 293 (321)
Q Consensus 237 ~------dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~l-as~S~Dgt~IrIWd~~t-g~~ 293 (321)
. .+.|..++..++....+..+...++.++|+|+|++| ++.+.++. |.+||+.+ |+.
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~~g~~ 217 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALEDDGVT 217 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSSS
T ss_pred cccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecCCCcC
Confidence 2 244555555544555554555678999999999855 55556778 99999974 443
No 193
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.17 E-value=8.3e-09 Score=92.55 Aligned_cols=207 Identities=9% Similarity=0.052 Sum_probs=127.0
Q ss_pred CeEEEEEcCCCCEEEEEc----------CCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCC
Q 020784 87 TLLHISFNQDHGCFAAGT----------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~----------~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~ 156 (321)
.+...+| ||++++... ...+.+|++++++.... ..+....++++++.+++++.... ....
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l------~~~~~~~~SpDg~~la~~~~~~~--~~~~ 85 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI------ENATMPRISPDGKKIAFMRANEE--KKVS 85 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE------ESCEEEEECTTSSEEEEEEEETT--TTEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc------ccCCCeEECCCCCEEEEEEeccC--CCcc
Confidence 6778888 999887542 12366888877654221 24667789999999988763210 0013
Q ss_pred cEEEEeCCCCcEEEEEeeCCceeEEEEeCC--eEEEEE-C---------------------------CEEEEEEcCCcEE
Q 020784 157 KVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL-E---------------------------QKIFVYNFADLKL 206 (321)
Q Consensus 157 ~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~-~---------------------------~~I~iwd~~~~~~ 206 (321)
.|.+||+.+++......... +..+.|+++ .++.+. + ..|.+||+.+++.
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred eEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 48888998887766555555 888999875 355543 2 4799999998887
Q ss_pred EEEEeccCCCCceEEEeeCCCceEEEeecCCC------C-cEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCC
Q 020784 207 LHQIETIANPKGLCAVSQGVGSLVLVCPGLQK------G-QVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK 279 (321)
Q Consensus 207 ~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d------g-~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~D 279 (321)
++.+.. . .+...++++ |+ ++++ +..+ . ...||.+.++....+..+ ..+..+ +|||++||.++.+
T Consensus 165 ~~~l~~-~-~~~~~~~sp--dg-~~~~-~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 165 IEEFEK-P-RFSSGIWHR--DK-IVVN-VPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp EEEEEE-E-TTCEEEEET--TE-EEEE-EECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECC
T ss_pred EeeecC-C-CcccccCCC--Ce-EEEE-EecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEcc
Confidence 556655 2 444555554 55 4443 4332 2 344443335555556556 555554 9999999888755
Q ss_pred C-------cEEEEEEcCCCcEEEEEeCCCccee---EEEeecCceEEEe
Q 020784 280 G-------TLVRIFNTLDGTLLQEECCPSISAQ---SGLWLSSAWLRVL 318 (321)
Q Consensus 280 g-------t~IrIWd~~tg~~i~~~~~g~~~~~---~~~s~d~~~la~~ 318 (321)
+ ..|.+|| +++.. .+..++.... ..++ |+ +++++
T Consensus 236 ~~~~~~~~~~l~~~d--~~~~~-~l~~~~~~~~~~~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD--GKEVM-GILDEVDRGVGQAKIKD-GK-VYFTL 279 (347)
T ss_dssp SSSCCCSSCEEEEEC--SSCEE-ESSTTCCSEEEEEEEET-TE-EEEEE
T ss_pred ccCCccccceEEEEC--CCceE-eccccCCcccCCccEEc-Cc-EEEEE
Confidence 3 2277777 66653 3433433222 3455 66 55443
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.14 E-value=6.7e-09 Score=91.33 Aligned_cols=159 Identities=14% Similarity=0.076 Sum_probs=115.6
Q ss_pred CCCcEEEEeCCCCcEEEEEeeCC--ceeEEEEeCCe-EEEEECCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceE
Q 020784 154 PLNKVMIWDDHQSRCIGELSFRS--EVRSVKLRRDR-IIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~~~--~v~~v~~~~~~-~~~~~~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
.++.|.+||.++|+.+.++..+. .+..+.+.++. ++++.++.|..||. +++.+.++..+.. .........+++.+
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~-~~~~~~~~~~dG~~ 90 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAG-CEMQTARILPDGNA 90 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTT-CEEEEEEECTTSCE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCC-ccccccEECCCCCE
Confidence 46999999999999998888764 67888887764 44455679999999 8999999887422 22344455567777
Q ss_pred EEeecCC-CCcEEEEeeCCcceEEee------ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcc
Q 020784 231 LVCPGLQ-KGQVRVEHYASKRTKFIM------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSIS 303 (321)
Q Consensus 231 la~sGs~-dg~V~i~d~~~~~~~~l~------~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~ 303 (321)
+++ .+. ++.|..++...+.+..+. .+...++.+++.++|.+|++.+.++. |..||.. |+.+.++..+...
T Consensus 91 lv~-~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~-v~~~d~~-G~~~w~~~~~~~~ 167 (276)
T 3no2_A 91 LVA-WCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE-VREIAPN-GQLLNSVKLSGTP 167 (276)
T ss_dssp EEE-EESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTE-EEEECTT-SCEEEEEECSSCC
T ss_pred EEE-ecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCE-EEEECCC-CCEEEEEECCCCc
Confidence 774 343 566666666544444443 23345777889999999999999999 9999998 9999999766554
Q ss_pred eeEEEeecCceEEE
Q 020784 304 AQSGLWLSSAWLRV 317 (321)
Q Consensus 304 ~~~~~s~d~~~la~ 317 (321)
.......+|..|.+
T Consensus 168 ~~~~~~~~g~~~v~ 181 (276)
T 3no2_A 168 FSSAFLDNGDCLVA 181 (276)
T ss_dssp CEEEECTTSCEEEE
T ss_pred cceeEcCCCCEEEE
Confidence 44555667766644
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.13 E-value=9.1e-09 Score=102.71 Aligned_cols=225 Identities=8% Similarity=-0.000 Sum_probs=137.4
Q ss_pred CCeEEEEEcCCCCEEEEEcCC------cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCC-------C
Q 020784 86 PTLLHISFNQDHGCFAAGTDH------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP-------Q 152 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~------gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~-------~ 152 (321)
..+..++|||||++||.+.++ .|++||+++++.... .. +...+..+.|+++ +.++.+...... .
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-EL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EE-EEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cC-CCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 368899999999999976542 378999998876432 11 1111245678899 888877632110 0
Q ss_pred CCCCcEEEEeCCCCcE--EEEEeeCC---ceeEEEEeCCe--EEEEE-C-----CEEEEEEcCCcE-E-EEEEeccCCCC
Q 020784 153 YPLNKVMIWDDHQSRC--IGELSFRS---EVRSVKLRRDR--IIVVL-E-----QKIFVYNFADLK-L-LHQIETIANPK 217 (321)
Q Consensus 153 ~~d~~v~iWD~~~~~~--~~~~~~~~---~v~~v~~~~~~--~~~~~-~-----~~I~iwd~~~~~-~-~~~l~~~~~~~ 217 (321)
-....|++|++.++.. ...+.... .+..+.|+++. +++.. + ..|++||+.++. . ...+..+....
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 0034599999987652 22233222 37788898875 44433 2 389999997762 1 45555443322
Q ss_pred ceEEEeeCCCceEEEeecCC---CCcEEEEeeCCc--ceE-EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcC-C
Q 020784 218 GLCAVSQGVGSLVLVCPGLQ---KGQVRVEHYASK--RTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL-D 290 (321)
Q Consensus 218 ~~~~~s~~~d~~~la~sGs~---dg~V~i~d~~~~--~~~-~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~-t 290 (321)
...+++++ ..|++.... ++.|.+|+.... ... .+..+...+..++|+ ++.++++...|+. .+||.+. +
T Consensus 320 -~~~~~~dg--~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~ 394 (741)
T 1yr2_A 320 -WDFVDGVG--DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLAFDLD 394 (741)
T ss_dssp -EEEEEEET--TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEEEETT
T ss_pred -EEEEeccC--CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCC
Confidence 22234444 333332222 456888888763 333 344555667788888 6778899999998 8888765 5
Q ss_pred CcEEEEEeCCCccee--EEEeecCceEEEe
Q 020784 291 GTLLQEECCPSISAQ--SGLWLSSAWLRVL 318 (321)
Q Consensus 291 g~~i~~~~~g~~~~~--~~~s~d~~~la~~ 318 (321)
|+..+++........ +.+++|++.|++.
T Consensus 395 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~ 424 (741)
T 1yr2_A 395 GKPAGAVSLPGIGSASGLSGRPGDRHAYLS 424 (741)
T ss_dssp SCEEEECBCSSSCEEEEEECCBTCSCEEEE
T ss_pred CCceeeccCCCCeEEEEeecCCCCCEEEEE
Confidence 777777653222222 3455778777653
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.13 E-value=1.3e-08 Score=93.51 Aligned_cols=219 Identities=11% Similarity=-0.022 Sum_probs=141.7
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEEecCCceeEEeeeec------CCceEEEEEecCCCeEEEEeCCCCCC
Q 020784 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFER------GGGIGVVEMLFRCNILALVGGGPDPQ 152 (321)
Q Consensus 90 ~v~fs~dg~~lasg~-----------~~gv~vw~~~~~~~~~~~~~~~------~~~v~~v~~~~~~~~~~~~sg~~~~~ 152 (321)
.++++|||++|.++. ++.|.+||..+.+.+....... +..-..+.++++++.+.++...
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~---- 157 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS---- 157 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----
Confidence 399999999887664 2458899999988766655310 0123346788999988877632
Q ss_pred CCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCCeE-EEEECCEEEEEEcCC-cEEEEEEeccCCC----Cce-EEEeeC
Q 020784 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRI-IVVLEQKIFVYNFAD-LKLLHQIETIANP----KGL-CAVSQG 225 (321)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~~I~iwd~~~-~~~~~~l~~~~~~----~~~-~~~s~~ 225 (321)
.++.|.++|+.+++.+.++.........-.....+ .++.++++-+.++.. ++...+....... ... ..+. .
T Consensus 158 -~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~-~ 235 (386)
T 3sjl_D 158 -PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS-Q 235 (386)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEE-T
T ss_pred -CCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeE-c
Confidence 24889999999999999887655321111223333 445577888888865 5543322111111 111 1222 2
Q ss_pred CCceEEEeecCCCCcEEEEeeCCcceEEeecc-------------ccceeEEEECCCCCEEEEEeC----------CCcE
Q 020784 226 VGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH-------------DSRIACFALTQDGQLLATSST----------KGTL 282 (321)
Q Consensus 226 ~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H-------------~~~V~~vafspdg~~las~S~----------Dgt~ 282 (321)
+++.++.+ +.+|.|.+.|............ ......+++++++..|..... .++
T Consensus 236 ~dG~~~~v--s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~- 312 (386)
T 3sjl_D 236 KAGRLVWP--TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRF- 312 (386)
T ss_dssp TTTEEEEE--BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEE-
T ss_pred CCCcEEEE--eCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCE-
Confidence 45655443 4578999999876543322211 234556888999877665532 135
Q ss_pred EEEEEcCCCcEEEEEeCCCcceeEEEeecCc-eEEE
Q 020784 283 VRIFNTLDGTLLQEECCPSISAQSGLWLSSA-WLRV 317 (321)
Q Consensus 283 IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~-~la~ 317 (321)
|-+.|+.+++.++++..+.....+.+++|++ +|.+
T Consensus 313 V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 313 VVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp EEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEE
T ss_pred EEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEE
Confidence 8899999999999998888777889999997 5544
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.12 E-value=1.3e-08 Score=88.00 Aligned_cols=215 Identities=9% Similarity=-0.052 Sum_probs=128.4
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 87 ~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
...+++++++|++++ +... ++|.+|+..+..... ....+......+++..+++ +.++. .++.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~-l~v~~-------~~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPFNGLYQPQGLAVDGAGT-VYVTD-------FNNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCCCSCCSCCCEEECTTCC-EEEEE-------TTTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-EeeCCcCCcceeEECCCCC-EEEEc-------CCCEEEEEeCC
Confidence 578899999999777 4344 568888865543321 1110123455667777777 44444 14789999987
Q ss_pred CCcEEEEEeeC--CceeEEEEeCCe-EEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCC
Q 020784 165 QSRCIGELSFR--SEVRSVKLRRDR-IIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (321)
Q Consensus 165 ~~~~~~~~~~~--~~v~~v~~~~~~-~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg 239 (321)
.+... .+... ..+..+.+.++. ++++. ++.|.+|+..+................+++ ++++.++++ ...++
T Consensus 96 ~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~--~~~g~l~v~-~~~~~ 171 (270)
T 1rwi_B 96 SNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAV--DNSGNVYVT-DTDNN 171 (270)
T ss_dssp CSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEE--CTTCCEEEE-EGGGT
T ss_pred CceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEE--eCCCCEEEE-ECCCC
Confidence 65443 22222 468889988653 55554 368999987554332211111112223444 445566653 55567
Q ss_pred cEEEEeeCCcceEEe-eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC-CcceeEEEeecCceE
Q 020784 240 QVRVEHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP-SISAQSGLWLSSAWL 315 (321)
Q Consensus 240 ~V~i~d~~~~~~~~l-~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g-~~~~~~~~s~d~~~l 315 (321)
.|.+++......... ..+...+..|+++++|.++++...++. |++||............+ .....+.+..+|+.+
T Consensus 172 ~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 172 RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVY 248 (270)
T ss_dssp EEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSCCEECCCCSCSCEEEEEECTTCCEE
T ss_pred EEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCcceeeccCCCCCceeEEECCCCCEE
Confidence 899998776554432 234467899999999998888877888 999998766543322122 223445666777643
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.11 E-value=7.7e-08 Score=89.35 Aligned_cols=196 Identities=12% Similarity=0.077 Sum_probs=128.0
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
.....++|+++|+++++... +.|++||.++......... ..... +++.++++.++++... ..+.|.+||..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~~-----~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--FKGGK-PAVTKDKQRVYSIGWE-----GTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--CCBCB-CEECTTSSEEEEEBSS-----TTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--CCCCc-eeEecCCCcEEEEecC-----CCceEEEEEcC
Confidence 36789999999998777766 5588999887665433331 22223 7888888877777632 11278999987
Q ss_pred CCcEEEEE----e-eCCceeEEEEeC-C-eEEEEE-CCEEEEEEcCCcEEEEEE-----eccCCCC--ceEEEeeCCCce
Q 020784 165 QSRCIGEL----S-FRSEVRSVKLRR-D-RIIVVL-EQKIFVYNFADLKLLHQI-----ETIANPK--GLCAVSQGVGSL 229 (321)
Q Consensus 165 ~~~~~~~~----~-~~~~v~~v~~~~-~-~~~~~~-~~~I~iwd~~~~~~~~~l-----~~~~~~~--~~~~~s~~~d~~ 229 (321)
.+.....+ . ....+.++.+++ + .++++. ++.|+.||..++.. ..+ ....... .-++++++ ++.
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~-~g~ 280 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFV-DSN 280 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETT-TTE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCC-CCE
Confidence 66543333 1 224577888887 3 455543 25899999976653 233 1111111 14455543 345
Q ss_pred EEEeecCCCCcEEEEeeCCcceEEeeccc---------------cceeEEEECCCCCEEEEEe-CCCcEEEEEEcCCCcE
Q 020784 230 VLVCPGLQKGQVRVEHYASKRTKFIMAHD---------------SRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL 293 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~~~~~~~l~~H~---------------~~V~~vafspdg~~las~S-~Dgt~IrIWd~~tg~~ 293 (321)
+++ +...++.|+.++.... ...+.++. .....|+|+++|.++++-+ .++. |++|++.+|++
T Consensus 281 lyv-~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v 357 (409)
T 3hrp_A 281 FYM-SDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYV 357 (409)
T ss_dssp EEE-EETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEE
T ss_pred EEE-EeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEE
Confidence 555 3677788888886544 44444442 4589999999999888877 7777 99999988875
Q ss_pred E
Q 020784 294 L 294 (321)
Q Consensus 294 i 294 (321)
.
T Consensus 358 ~ 358 (409)
T 3hrp_A 358 S 358 (409)
T ss_dssp E
T ss_pred E
Confidence 4
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.10 E-value=2.7e-09 Score=105.78 Aligned_cols=199 Identities=12% Similarity=-0.033 Sum_probs=125.6
Q ss_pred EEEEEcCCCCEEEEEcC-Cc-------------EEEEEecCCce--eEEeeee-cCCceEEEEEecCCCeEEEEeCCCCC
Q 020784 89 LHISFNQDHGCFAAGTD-HG-------------FRIYNCDPFRE--IFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDP 151 (321)
Q Consensus 89 ~~v~fs~dg~~lasg~~-~g-------------v~vw~~~~~~~--~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~ 151 (321)
..++|+|||+.|+.++. .+ |.+|++.+... ....... +...+..+.++++++.+++.+....
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW- 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-
Confidence 67999999999987765 33 88999987752 1222210 2245677889999998888773210
Q ss_pred CCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCCeEEEEEC-----CEEEEEEcCCcEE--EEEEeccCCCCceEEEee
Q 020784 152 QYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLE-----QKIFVYNFADLKL--LHQIETIANPKGLCAVSQ 224 (321)
Q Consensus 152 ~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~-----~~I~iwd~~~~~~--~~~l~~~~~~~~~~~~s~ 224 (321)
....|.+||..+++..........+....++...+++.++ ..|.+||+.+++. ...+..+.....+..++.
T Consensus 250 --~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~ 327 (695)
T 2bkl_A 250 --SENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI 327 (695)
T ss_dssp --TEEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE
T ss_pred --CceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE
Confidence 1236778877666544333333344444455544555554 5899999976542 233433321222333444
Q ss_pred CCCceEEEeecCCCCcEEEEeeC--CcceEEeecc-ccceeEEEECCCCCEEE----EEeCCCcEEEEEEcCCCcE
Q 020784 225 GVGSLVLVCPGLQKGQVRVEHYA--SKRTKFIMAH-DSRIACFALTQDGQLLA----TSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 225 ~~d~~~la~sGs~dg~V~i~d~~--~~~~~~l~~H-~~~V~~vafspdg~~la----s~S~Dgt~IrIWd~~tg~~ 293 (321)
. ++.+++ +...||..+||.+. .+....+..+ .+.|..++++|++..|+ +...+++ |.+||+.+|+.
T Consensus 328 ~-~~~lv~-~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~-v~~~d~~~g~~ 400 (695)
T 2bkl_A 328 V-GGHLSL-EYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ-IYKTSVSTGKS 400 (695)
T ss_dssp E-TTEEEE-EEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE-EEEEETTTCCE
T ss_pred E-CCEEEE-EEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE-EEEEECCCCcE
Confidence 4 345555 57889988886554 4445566655 67789999999998776 3334577 99999999874
No 200
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.09 E-value=4e-07 Score=81.60 Aligned_cols=214 Identities=8% Similarity=0.001 Sum_probs=133.3
Q ss_pred CeEEEEEcCCCC-EEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 87 TLLHISFNQDHG-CFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 87 ~V~~v~fs~dg~-~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
-..+.+|++++. ++.++.. ++|.+||.++.+.. .... ...+..+.+.+++++++... +.|.+||.+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~--~~~v~~i~~~~dg~l~v~~~---------~gl~~~d~~ 117 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL--PFMGSALAKISDSKQLIASD---------DGLFLRDTA 117 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC--SSCEEEEEEEETTEEEEEET---------TEEEEEETT
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC--CCcceEEEEeCCCeEEEEEC---------CCEEEEECC
Confidence 356889999854 5556655 56888988776542 2232 45678888888877655432 459999998
Q ss_pred CCcEEEEEeeC-----CceeEEEEeCCe-EEEEEC--------CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceE
Q 020784 165 QSRCIGELSFR-----SEVRSVKLRRDR-IIVVLE--------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (321)
Q Consensus 165 ~~~~~~~~~~~-----~~v~~v~~~~~~-~~~~~~--------~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~ 230 (321)
+++........ ..+..+.++++. +++++. +.|..++ +++... +...... ...+..++|+..
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~--~~~i~~s~dg~~ 192 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISI--PNSICFSPDGTT 192 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESS--EEEEEECTTSCE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcc--cCCeEEcCCCCE
Confidence 88754332221 246778888764 455432 2455555 455432 3222111 233444555555
Q ss_pred EEeecCCCCcEEEEeeC--Cc-ce------EEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC
Q 020784 231 LVCPGLQKGQVRVEHYA--SK-RT------KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS 301 (321)
Q Consensus 231 la~sGs~dg~V~i~d~~--~~-~~------~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~ 301 (321)
+.++.+.++.|.+++.. ++ .+ ..+..+...+..++++++|.+.++...++. |.+||. +|+.+.++....
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-v~~~d~-~g~~~~~i~~~~ 270 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-VDRYDT-DGNHIARYEVPG 270 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-EEEECT-TCCEEEEEECSC
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-EEEECC-CCCEEEEEECCC
Confidence 54446667889998874 33 21 123334566889999999998887766778 999998 788888876543
Q ss_pred c-ceeEEEe-ecCceEEEee
Q 020784 302 I-SAQSGLW-LSSAWLRVLR 319 (321)
Q Consensus 302 ~-~~~~~~s-~d~~~la~~~ 319 (321)
. ...++|. .++..|.++.
T Consensus 271 ~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 271 KQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp SBEEEEEEESTTSCEEEEEE
T ss_pred CCcEEEEEecCCCCEEEEEe
Confidence 2 3344665 6777776643
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.09 E-value=1e-08 Score=88.52 Aligned_cols=196 Identities=8% Similarity=-0.044 Sum_probs=127.9
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
..+.+++|+++|+++++..++.|.+||.+..... ............+.+.+++++++... .++.|.+||..+
T Consensus 67 ~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~-------~~~~i~~~~~~~ 138 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADR-------GNNRVVKLAAGS 138 (270)
T ss_dssp CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEG-------GGTEEEEECTTC
T ss_pred CCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEEC-------CCCEEEEEECCC
Confidence 3577899999999777766556888987654432 22210124566777777777554433 247899998765
Q ss_pred CcEEEEEe-eCCceeEEEEeCC-eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcE
Q 020784 166 SRCIGELS-FRSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQV 241 (321)
Q Consensus 166 ~~~~~~~~-~~~~v~~v~~~~~-~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V 241 (321)
........ ....+..+++.++ .++++. ++.|.+||............+ ......+..++++.+.+ +...++.|
T Consensus 139 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~~~p~~i~~d~~g~l~v-~~~~~~~v 215 (270)
T 1rwi_B 139 KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD--ITAPWGIAVDEAGTVYV-TEHNTNQV 215 (270)
T ss_dssp CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS--CCSEEEEEECTTCCEEE-EETTTSCE
T ss_pred ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccC--CCCceEEEECCCCCEEE-EECCCCcE
Confidence 54332211 1235778888864 455554 369999998776543322211 12345566666666666 35667889
Q ss_pred EEEeeCCcceEEee-ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 242 RVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 242 ~i~d~~~~~~~~l~-~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
.+++........+. .+...+.+|+++++|+++++.+.+++ |+++++...+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-v~~~~~~~~~~ 267 (270)
T 1rwi_B 216 VKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR-VVKLTSLEHHH 267 (270)
T ss_dssp EEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTE-EEEECCCGGGS
T ss_pred EEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCE-EEEEcCCCccc
Confidence 99987665544332 34467999999999999999998999 99999876543
No 202
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=1.4e-07 Score=87.55 Aligned_cols=224 Identities=10% Similarity=0.029 Sum_probs=139.4
Q ss_pred CCCCEEEEEcC--CcEEEEEecCC--ceeEEeeee-------cCC-ceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 95 QDHGCFAAGTD--HGFRIYNCDPF--REIFRRDFE-------RGG-GIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 95 ~dg~~lasg~~--~gv~vw~~~~~--~~~~~~~~~-------~~~-~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
.++++|.+.+. +.|.|+|+.+. +........ .+. .--.+.+.+++ .++.+.|+.++ -..+.|.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g-~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG-EGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS-CSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC-CCCCeEEEEE
Confidence 88998887665 45889998644 222222210 010 11234556777 55544433211 1347899999
Q ss_pred CCCCcEEEEEeeCC----ceeEEEEeCCe--EEEEE--------------------CCEEEEEEcCCcEEEEEEeccCCC
Q 020784 163 DHQSRCIGELSFRS----EVRSVKLRRDR--IIVVL--------------------EQKIFVYNFADLKLLHQIETIANP 216 (321)
Q Consensus 163 ~~~~~~~~~~~~~~----~v~~v~~~~~~--~~~~~--------------------~~~I~iwd~~~~~~~~~l~~~~~~ 216 (321)
.++++.+.++.... -.+.+.|++++ +++.. +++|.+||+.+++.++++......
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 99999998886432 23446667643 33332 479999999999999998874221
Q ss_pred Cc--eEEEeeCCCceEEEeecC-----CCCcEEEEeeCCcceE---E--eecc----------------ccceeEEEECC
Q 020784 217 KG--LCAVSQGVGSLVLVCPGL-----QKGQVRVEHYASKRTK---F--IMAH----------------DSRIACFALTQ 268 (321)
Q Consensus 217 ~~--~~~~s~~~d~~~la~sGs-----~dg~V~i~d~~~~~~~---~--l~~H----------------~~~V~~vafsp 268 (321)
.. -+.|.+++++.++.+... .+++|.+|.+..+... + +... ...+..|.+|+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 11 234544666665544344 5667876544333211 1 1110 24578999999
Q ss_pred CCCEEEEEeCCCcEEEEEEcC---CCcEEEEEeCCC---------------cceeEEEeecCceEEEeec
Q 020784 269 DGQLLATSSTKGTLVRIFNTL---DGTLLQEECCPS---------------ISAQSGLWLSSAWLRVLRT 320 (321)
Q Consensus 269 dg~~las~S~Dgt~IrIWd~~---tg~~i~~~~~g~---------------~~~~~~~s~d~~~la~~~~ 320 (321)
||++|-.+.+....|++||+. +.+++.++..|. ....+.+++||++|.|+-.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 999887776644349999986 357888887762 2466799999999998754
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.05 E-value=7.8e-07 Score=77.39 Aligned_cols=211 Identities=10% Similarity=-0.017 Sum_probs=134.1
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
..+.+++++++|+++++... +++.+||.+ .+.. ..... +...+..+.+..++++.+... .++.|..||.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~~~~~ 85 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTEN-------AANKIGRITK 85 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEET-------TTTEEEEECT
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCCCEEEeCC-------CCCeEEEECC
Confidence 57999999999998877664 668899877 4332 22210 234566777777776555443 2478999998
Q ss_pred CCCcEEEEEee---CCceeEEEEeCC-eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCC
Q 020784 164 HQSRCIGELSF---RSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 164 ~~~~~~~~~~~---~~~v~~v~~~~~-~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (321)
. ++. ..+.. ...+..+.+.++ .++++. ++.|..||. +++.. .+...........+..++++.+.++ ...
T Consensus 86 ~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~-~~~ 160 (299)
T 2z2n_A 86 K-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFT-ENQ 160 (299)
T ss_dssp T-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEE-ETT
T ss_pred C-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEE-eCC
Confidence 6 433 33332 236788888864 466665 359999998 55443 2322212223455566666666663 555
Q ss_pred CCcEEEEeeCCcceEE--eeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC---CcceeEEEeecC
Q 020784 238 KGQVRVEHYASKRTKF--IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP---SISAQSGLWLSS 312 (321)
Q Consensus 238 dg~V~i~d~~~~~~~~--l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g---~~~~~~~~s~d~ 312 (321)
++.|..++. ++.... +..+...+..++++++|.++++...++. |.+||. +++... +... .....+.+..+|
T Consensus 161 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEITE-FKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEE-EECSSTTCCEEEEEECSTT
T ss_pred CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcEEE-EECCCCCCCceeEEECCCC
Confidence 678888887 544443 3345567899999999998887776788 999999 777543 3222 222334555666
Q ss_pred ce
Q 020784 313 AW 314 (321)
Q Consensus 313 ~~ 314 (321)
+.
T Consensus 237 ~l 238 (299)
T 2z2n_A 237 DL 238 (299)
T ss_dssp CE
T ss_pred CE
Confidence 53
No 204
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.04 E-value=9.5e-08 Score=84.00 Aligned_cols=201 Identities=9% Similarity=-0.015 Sum_probs=123.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeee---cCCceEEEEEecCCCeEEEEe--CCC------CC
Q 020784 84 PPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE---RGGGIGVVEMLFRCNILALVG--GGP------DP 151 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~---~~~~v~~v~~~~~~~~~~~~s--g~~------~~ 151 (321)
+...+.+++|++||+++++... ++|.+||..+++........ ....+..+.+.++++++++-+ +.. ..
T Consensus 67 ~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 67 PSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp SCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCC
T ss_pred CCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccc
Confidence 4457899999999998888765 67889998777643222110 012234567778887665532 100 00
Q ss_pred CC--CCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCCe-EEEEE--CCEEEEEEcC-CcEE---EEEEeccCCCCceEEE
Q 020784 152 QY--PLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR-IIVVL--EQKIFVYNFA-DLKL---LHQIETIANPKGLCAV 222 (321)
Q Consensus 152 ~~--~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~--~~~I~iwd~~-~~~~---~~~l~~~~~~~~~~~~ 222 (321)
.. ..+.|..+|.. ++..........+..++|+++. ++++. ++.|.+|++. ++++ .+.+..+.. ....+
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~--~p~~i 223 (296)
T 3e5z_A 147 EMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG--KTDGL 223 (296)
T ss_dssp CCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS--CCCSE
T ss_pred cccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC--CCCeE
Confidence 00 12355556555 5443333333467889998763 22443 3699999986 5554 334421111 12233
Q ss_pred eeCCCceEEEeecCCCCcEEEEeeCCcceEEeeccccceeEEEE-CCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 223 SQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFAL-TQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 223 s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vaf-spdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
..++++.+.++ . ++.|.+|+...+.+..+..+.. +++++| +|+++.|..++.+ . +--++..+.++
T Consensus 224 ~~d~~G~l~v~-~--~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 224 RVDAGGLIWAS-A--GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-E-FWSIETNVRGL 289 (296)
T ss_dssp EEBTTSCEEEE-E--TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-E-EEEEECSCCBC
T ss_pred EECCCCCEEEE-c--CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-e-EEEEEcccccc
Confidence 44556677764 3 6789999987666677877877 999999 6899988888865 3 44556666554
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.03 E-value=1.5e-07 Score=83.00 Aligned_cols=201 Identities=13% Similarity=0.094 Sum_probs=122.8
Q ss_pred CCeEEEEEcCC-CCEEEEEcCCcEEEEEecCCceeEE-eeee---cCCceEEEEEecCCCeEEEEeCCC--------CCC
Q 020784 86 PTLLHISFNQD-HGCFAAGTDHGFRIYNCDPFREIFR-RDFE---RGGGIGVVEMLFRCNILALVGGGP--------DPQ 152 (321)
Q Consensus 86 ~~V~~v~fs~d-g~~lasg~~~gv~vw~~~~~~~~~~-~~~~---~~~~v~~v~~~~~~~~~~~~sg~~--------~~~ 152 (321)
..+.+++++++ |+++++...+++.+||.+ ++.... .... ....+..+.+.+++++.+...+.. ...
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccccccc
Confidence 46899999999 887777766788899987 543221 1110 012356777777777655443210 000
Q ss_pred CCCCcEEEEeCCCCcEEEEEeeCCceeEEEEe----CCe--EEEEE--CCEEEEEEcC-CcEEE--EEEeccC-CC-Cce
Q 020784 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLR----RDR--IIVVL--EQKIFVYNFA-DLKLL--HQIETIA-NP-KGL 219 (321)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~----~~~--~~~~~--~~~I~iwd~~-~~~~~--~~l~~~~-~~-~~~ 219 (321)
...+.|..||.. ++..........+..+.++ ++. ++++. ++.|.+||+. +++.. ..+.... .. ...
T Consensus 150 ~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p 228 (314)
T 1pjx_A 150 EKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGA 228 (314)
T ss_dssp SSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEE
T ss_pred CCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCC
Confidence 001457777765 5554433333456778888 764 55554 3699999975 44421 1221111 11 223
Q ss_pred EEEeeCCCceEEEeecCCCCcEEEEeeCCc-ceEEeeccccceeEEEECCCCC-EEEEEeCCCcEEEEEEcCC
Q 020784 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASK-RTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 220 ~~~s~~~d~~~la~sGs~dg~V~i~d~~~~-~~~~l~~H~~~V~~vafspdg~-~las~S~Dgt~IrIWd~~t 290 (321)
..+..++++.+.+. ...++.|.+|+..++ .+..+..+...+.+++|+++|+ ++++...++. |.+|++..
T Consensus 229 ~~i~~d~~G~l~v~-~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-l~~~~~~~ 299 (314)
T 1pjx_A 229 DGMDFDEDNNLLVA-NWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNA-VWKFEWQR 299 (314)
T ss_dssp EEEEEBTTCCEEEE-EETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTE-EEEEECSS
T ss_pred CceEECCCCCEEEE-EcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCe-EEEEeCCC
Confidence 44555666677663 445678888988744 3456666778899999999999 5555566677 88999875
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.01 E-value=4.5e-08 Score=97.01 Aligned_cols=225 Identities=9% Similarity=0.080 Sum_probs=134.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEE-----cC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCC-----
Q 020784 83 SPPPTLLHISFNQDHGCFAAG-----TD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP----- 151 (321)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg-----~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~----- 151 (321)
.+...|..++|||||++||-+ ++ ..|+|||+++++.+.. .. +......+.|+ +++.++.+......
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EE-EEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-cc-CCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 344578899999999999943 33 2478999999875432 22 11112456788 99988887743100
Q ss_pred -CCCCCcEEEEeCCCCcE--EEEEeeC----CceeEEEEeCCe--EEEEE-C----CEEEEEEcCCcE-EEEEEeccCCC
Q 020784 152 -QYPLNKVMIWDDHQSRC--IGELSFR----SEVRSVKLRRDR--IIVVL-E----QKIFVYNFADLK-LLHQIETIANP 216 (321)
Q Consensus 152 -~~~d~~v~iWD~~~~~~--~~~~~~~----~~v~~v~~~~~~--~~~~~-~----~~I~iwd~~~~~-~~~~l~~~~~~ 216 (321)
.-....|++|++.++.. ...+... ..+..+.++++. +++.. . +.|+++|+.+++ ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 00235699999887642 2222222 235678888764 33332 1 489999997652 34455544332
Q ss_pred CceEEEeeCCCceEEEeecCC---CCcEEEEeeCCcce---EEeeccccceeEEEECCCCCEEEEEeCCC---cEEEEEE
Q 020784 217 KGLCAVSQGVGSLVLVCPGLQ---KGQVRVEHYASKRT---KFIMAHDSRIACFALTQDGQLLATSSTKG---TLVRIFN 287 (321)
Q Consensus 217 ~~~~~~s~~~d~~~la~sGs~---dg~V~i~d~~~~~~---~~l~~H~~~V~~vafspdg~~las~S~Dg---t~IrIWd 287 (321)
.. ..++++++ .+++. ... .+.|..+++..... ..+..|...+. .|++++.+|+....++ . |++||
T Consensus 283 ~~-~~~~~~g~-~l~~~-t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~-l~~~d 356 (693)
T 3iuj_A 283 DV-SLVDNKGS-TLYLL-TNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATAR-VEQFD 356 (693)
T ss_dssp CE-EEEEEETT-EEEEE-ECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEE-EEEEC
T ss_pred eE-EEEeccCC-EEEEE-ECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeE-EEEEE
Confidence 22 22555543 34433 333 35677788876443 56777877765 8999998887766544 4 88999
Q ss_pred cCCCcEEEEEeCCCcceeE--EEeecCceEEE
Q 020784 288 TLDGTLLQEECCPSISAQS--GLWLSSAWLRV 317 (321)
Q Consensus 288 ~~tg~~i~~~~~g~~~~~~--~~s~d~~~la~ 317 (321)
+.. ...+.+......... .+++++..|++
T Consensus 357 ~~g-~~~~~l~~p~~~~~~~~~~~~d~~~l~~ 387 (693)
T 3iuj_A 357 YEG-KRVREVALPGLGSVSGFNGKHDDPALYF 387 (693)
T ss_dssp TTS-CEEEEECCSSSSEEEECCCCTTCSCEEE
T ss_pred CCC-CeeEEeecCCCceEEeeecCCCCCEEEE
Confidence 874 445555433322222 33456666554
No 207
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.01 E-value=3.4e-08 Score=98.04 Aligned_cols=201 Identities=9% Similarity=0.000 Sum_probs=125.8
Q ss_pred eEEEEEcCCCCEEEEEcC-Cc----------------EEEEEecCCcee--EEeeee-cCCceEEEEEecCCCeEEEEeC
Q 020784 88 LLHISFNQDHGCFAAGTD-HG----------------FRIYNCDPFREI--FRRDFE-RGGGIGVVEMLFRCNILALVGG 147 (321)
Q Consensus 88 V~~v~fs~dg~~lasg~~-~g----------------v~vw~~~~~~~~--~~~~~~-~~~~v~~v~~~~~~~~~~~~sg 147 (321)
+..++|+|||+.|+.++. .+ |.+|++.+.... ...+.. +...+..+.++++++.+++.+.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 567999999999987765 33 778998876522 222210 1233567789999998888764
Q ss_pred CCCCCCCCCcEEEEeCCC------Cc-EEEEEeeC-CceeE-EEEeCCeEEEEEC-----CEEEEEEcCCcE--EEEEEe
Q 020784 148 GPDPQYPLNKVMIWDDHQ------SR-CIGELSFR-SEVRS-VKLRRDRIIVVLE-----QKIFVYNFADLK--LLHQIE 211 (321)
Q Consensus 148 ~~~~~~~d~~v~iWD~~~------~~-~~~~~~~~-~~v~~-v~~~~~~~~~~~~-----~~I~iwd~~~~~--~~~~l~ 211 (321)
... ..+..|.+||+.+ +. ....+..+ ..+.. +.-..+.+++.++ ..|.+||+.+++ ..+.+.
T Consensus 253 ~~~--~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 253 EGC--DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp CSS--SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred ccC--CCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 211 0157899999986 42 23334332 22322 3334566766653 279999997763 234444
Q ss_pred ccCCCCceEEEeeCCCceEEEeecCCCCcEEE--EeeCCc-ceEEeeccccceeEEEECCCCCEEE-EEe---CCCcEEE
Q 020784 212 TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRV--EHYASK-RTKFIMAHDSRIACFALTQDGQLLA-TSS---TKGTLVR 284 (321)
Q Consensus 212 ~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i--~d~~~~-~~~~l~~H~~~V~~vafspdg~~la-s~S---~Dgt~Ir 284 (321)
.+.....+..+...+++.+++ +...+|..+| |+...+ .+..+..|.+.|..++++|++..|+ +.+ ..++ |.
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~-~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~-i~ 408 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVL-CYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGI-IY 408 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEE-EEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCE-EE
T ss_pred CCCCCCeEEEEEEEcCCEEEE-EEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCE-EE
Confidence 443322233333333445555 4777886555 666444 4567778888899999999987655 322 3567 99
Q ss_pred EEEcCCCc
Q 020784 285 IFNTLDGT 292 (321)
Q Consensus 285 IWd~~tg~ 292 (321)
+||+.+|+
T Consensus 409 ~~d~~tg~ 416 (710)
T 2xdw_A 409 HCDLTKEE 416 (710)
T ss_dssp EEETTSSS
T ss_pred EEECCCCc
Confidence 99999887
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.01 E-value=1.4e-07 Score=85.20 Aligned_cols=228 Identities=7% Similarity=-0.003 Sum_probs=134.2
Q ss_pred CCeEEEEEcCCCCEEEEEcC--Cc-EEEEEecCCceeEEee-----e-ecCCceEEEEEecCCCeEEEEeCCCCCCCCCC
Q 020784 86 PTLLHISFNQDHGCFAAGTD--HG-FRIYNCDPFREIFRRD-----F-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~--~g-v~vw~~~~~~~~~~~~-----~-~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~ 156 (321)
.....|++++||+++++... ++ ++||.++.++ +.... . .+-..+..+.+..++++.++-.+.. ...++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~--~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ--SKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH--HTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC--cCCCC
Confidence 47889999999999988642 23 5688776443 22110 0 0123566777777765444432200 00136
Q ss_pred cEEEEeCCCCcEEEEEeeCC-------ceeEEEEeC--CeEEEEE-----CCEEEEEEcCCcEEEEEEeccCC--C----
Q 020784 157 KVMIWDDHQSRCIGELSFRS-------EVRSVKLRR--DRIIVVL-----EQKIFVYNFADLKLLHQIETIAN--P---- 216 (321)
Q Consensus 157 ~v~iWD~~~~~~~~~~~~~~-------~v~~v~~~~--~~~~~~~-----~~~I~iwd~~~~~~~~~l~~~~~--~---- 216 (321)
+|.+||.++++.+..+.+.. .+..+.+.+ ..++++. ++.|.+||+.+++..+.+..|.. +
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 89999999998877776532 357788884 3555653 35999999988877666543210 0
Q ss_pred ---------------------CceEEEeeCCCceEEEeecCCCCcEEEEeeC---Ccc-----e---EEeeccccceeEE
Q 020784 217 ---------------------KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA---SKR-----T---KFIMAHDSRIACF 264 (321)
Q Consensus 217 ---------------------~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~---~~~-----~---~~l~~H~~~V~~v 264 (321)
.....+..++|+..|.++....+.+...+.. ... + ....++......+
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi 253 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI 253 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence 1223344445555444322322333333321 100 0 0222455677889
Q ss_pred EECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC--CCcceeEEEeecCceEEE
Q 020784 265 ALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC--PSISAQSGLWLSSAWLRV 317 (321)
Q Consensus 265 afspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~--g~~~~~~~~s~d~~~la~ 317 (321)
+++++|.++++...++. |.+||..+|+....... ......+++..+++++.+
T Consensus 254 a~d~~G~l~va~~~~~~-V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSA-IGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp EECTTCCEEEEEGGGTE-EEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEE
T ss_pred EECCCCCEEEEccCCCe-EEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEE
Confidence 99999999999988888 99999867875333322 122344566667765443
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.99 E-value=6.1e-07 Score=82.27 Aligned_cols=202 Identities=12% Similarity=0.005 Sum_probs=120.6
Q ss_pred EEEEEcCCCCEEEEEcC---CcEEEEEecCCceeEE-eeeecCCceEEEEEecCCC-eEEEEeCCCCCCCCCCcEEEEeC
Q 020784 89 LHISFNQDHGCFAAGTD---HGFRIYNCDPFREIFR-RDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 89 ~~v~fs~dg~~lasg~~---~gv~vw~~~~~~~~~~-~~~~~~~~v~~v~~~~~~~-~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
..++|+|||++|+++.. +.|.++| ++++.... ... .+. +.+.+.++ .++..+ .|+++.++|.
T Consensus 128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--~~~---~~~~~~~~~~~~~~~-------~dg~~~~vd~ 194 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--PTC---YHIHPGAPSTFYLLC-------AQGGLAKTDH 194 (373)
T ss_pred cceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--Cce---EEEEeCCCceEEEEc-------CCCCEEEEEC
Confidence 47899999999998763 4588999 88876544 332 222 33334443 333333 4689999999
Q ss_pred CCCcEEEEEe-----eC-Cce-eEEEEe--CCe-EEEEECCEEEEEEcCCc--EEEEEEeccC--------CCCc--eEE
Q 020784 164 HQSRCIGELS-----FR-SEV-RSVKLR--RDR-IIVVLEQKIFVYNFADL--KLLHQIETIA--------NPKG--LCA 221 (321)
Q Consensus 164 ~~~~~~~~~~-----~~-~~v-~~v~~~--~~~-~~~~~~~~I~iwd~~~~--~~~~~l~~~~--------~~~~--~~~ 221 (321)
+++.+.... .. ..+ ....+. ... +++...+.+.+.|+... +.+..+.... .+.+ .++
T Consensus 195 -~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 195 -AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred -CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE
Confidence 877663322 11 111 111122 123 33344568888898654 3333332111 1122 245
Q ss_pred EeeCCCceEEEeecC-------CCCcEEEEeeCCcce-EEeeccccceeEEEECCCCC-EEEEEeC-CCcEEEEEEcCCC
Q 020784 222 VSQGVGSLVLVCPGL-------QKGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQ-LLATSST-KGTLVRIFNTLDG 291 (321)
Q Consensus 222 ~s~~~d~~~la~sGs-------~dg~V~i~d~~~~~~-~~l~~H~~~V~~vafspdg~-~las~S~-Dgt~IrIWd~~tg 291 (321)
++++++..+++.... ..+.|.+.|..+..+ .++. -.....+++|+|||+ +|.++.. +++ |.|||+.++
T Consensus 274 ~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~-V~ViD~~t~ 351 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEV-LHIYDAGAG 351 (373)
T ss_pred ECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCe-EEEEECCCC
Confidence 555543333332110 235788899887664 4553 334689999999999 7888774 788 999999999
Q ss_pred cEEEE-EeCCCcceeE
Q 020784 292 TLLQE-ECCPSISAQS 306 (321)
Q Consensus 292 ~~i~~-~~~g~~~~~~ 306 (321)
+.+++ ...|.....+
T Consensus 352 ~vv~~i~~vG~~P~~~ 367 (373)
T 2mad_H 352 DQDQSTVELGSGPQVL 367 (373)
T ss_pred CEEeeecCCCCCCcEE
Confidence 99988 4566655443
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.99 E-value=3.8e-08 Score=91.70 Aligned_cols=221 Identities=13% Similarity=0.020 Sum_probs=139.3
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEEecCCceeEEeeee------cCCceEEEEEecCCCeEEEEeCCCCCC
Q 020784 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFE------RGGGIGVVEMLFRCNILALVGGGPDPQ 152 (321)
Q Consensus 90 ~v~fs~dg~~lasg~-----------~~gv~vw~~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~~~~sg~~~~~ 152 (321)
.+.|+|||++|.++. ++.|.++|..+.+.+...... ....-..+.++++++.+.++...
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~---- 197 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS---- 197 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----
Confidence 799999999887664 245789999998876655430 00112345778899988887632
Q ss_pred CCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCCe-EEEEECCEEEEEEcCCcEEEEE----EeccCCCCc-eEEEeeCC
Q 020784 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR-IIVVLEQKIFVYNFADLKLLHQ----IETIANPKG-LCAVSQGV 226 (321)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~~I~iwd~~~~~~~~~----l~~~~~~~~-~~~~s~~~ 226 (321)
.++.|.+.|..+++.+.++.....+.-....... +..+.++++.+.+..+++.... +.....+.. ...+.+++
T Consensus 198 -~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 198 -PAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred -CCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 2478999999999999888765432111112222 2333456777778765554432 221122211 23445554
Q ss_pred CceEEEeecCCCCcEEEEeeCCcceEEeec-------------cccceeEEEECCCCCEEEEEeC----------CCcEE
Q 020784 227 GSLVLVCPGLQKGQVRVEHYASKRTKFIMA-------------HDSRIACFALTQDGQLLATSST----------KGTLV 283 (321)
Q Consensus 227 d~~~la~sGs~dg~V~i~d~~~~~~~~l~~-------------H~~~V~~vafspdg~~las~S~----------Dgt~I 283 (321)
...+++ ...|.|.+.|........+.. .......++|+|+|.++..... +++ |
T Consensus 277 ~~~~~~---s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~-V 352 (426)
T 3c75_H 277 GRLVWP---TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF-V 352 (426)
T ss_dssp CEEEEE---BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE-E
T ss_pred CEEEEE---eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE-E
Confidence 333332 346788888876544332211 1122334799999875554421 346 9
Q ss_pred EEEEcCCCcEEEEEeCCCcceeEEEeecCc-eEEEee
Q 020784 284 RIFNTLDGTLLQEECCPSISAQSGLWLSSA-WLRVLR 319 (321)
Q Consensus 284 rIWd~~tg~~i~~~~~g~~~~~~~~s~d~~-~la~~~ 319 (321)
-|+|+.+++.++++..+.....+.+++||+ +|.++.
T Consensus 353 sVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 353 VVLNAETGERINKIELGHEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp EEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEE
T ss_pred EEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEc
Confidence 999999999999998888788889999999 676654
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.95 E-value=2.8e-07 Score=84.56 Aligned_cols=209 Identities=11% Similarity=-0.021 Sum_probs=129.3
Q ss_pred EEEEEcCCCCEEEEEc---CCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 89 LHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 89 ~~v~fs~dg~~lasg~---~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
..++|+|||++|.++. .+.|.|+|+.+.+.+..... .+ ...+ .......++..+ .||++.+.+..+
T Consensus 140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v--~g-~~~~-~P~g~~~~~~~~-------~DG~~~~v~~~~ 208 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV--PD-CYHI-FPTAPDTFFMHC-------RDGSLAKVAFGT 208 (386)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CS-EEEE-EEEETTEEEEEE-------TTSCEEEEECCS
T ss_pred ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC--CC-ccee-ecCCCceeEEEC-------CCCCEEEEECCC
Confidence 3589999999888765 25588999999988766653 22 1111 112233444444 468888888875
Q ss_pred -CcEEEEEe-e---C-Ccee-EEEEe-CC-eE-EEEECCEEEEEEcCCc--EEEEEEec----------cCCCCceEEEe
Q 020784 166 -SRCIGELS-F---R-SEVR-SVKLR-RD-RI-IVVLEQKIFVYNFADL--KLLHQIET----------IANPKGLCAVS 223 (321)
Q Consensus 166 -~~~~~~~~-~---~-~~v~-~v~~~-~~-~~-~~~~~~~I~iwd~~~~--~~~~~l~~----------~~~~~~~~~~s 223 (321)
++...... . . ..+. ...|. ++ ++ ++..+++|.+.|+.+. +.+.++.. .......++++
T Consensus 209 ~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~ 288 (386)
T 3sjl_D 209 EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH 288 (386)
T ss_dssp SSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEE
T ss_pred CCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeEC
Confidence 55432211 1 0 1121 13443 23 33 4445579999999654 34444430 01123356676
Q ss_pred eCCCceEEEeecC--------CCCcEEEEeeCCcceE-EeeccccceeEEEECCCCC-EEEE-EeCCCcEEEEEEcCCCc
Q 020784 224 QGVGSLVLVCPGL--------QKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQ-LLAT-SSTKGTLVRIFNTLDGT 292 (321)
Q Consensus 224 ~~~d~~~la~sGs--------~dg~V~i~d~~~~~~~-~l~~H~~~V~~vafspdg~-~las-~S~Dgt~IrIWd~~tg~ 292 (321)
++.+..+++. .. ..+.|.+.|..++++. .+.- ...+..|+|++||+ +|.+ ...+++ |.|+|..+++
T Consensus 289 ~~~~~lyV~~-~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~-VsViD~~t~k 365 (386)
T 3sjl_D 289 RALDRIYLLV-DQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKT-LYIHDAESGE 365 (386)
T ss_dssp TTTTEEEEEE-EECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTE-EEEEETTTCC
T ss_pred CCCCeEEEEe-ccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCe-EEEEECCCCc
Confidence 6554444432 21 1246888888876643 3332 23689999999996 5555 455888 9999999999
Q ss_pred EEEEEeCCCcceeEEEeec
Q 020784 293 LLQEECCPSISAQSGLWLS 311 (321)
Q Consensus 293 ~i~~~~~g~~~~~~~~s~d 311 (321)
.++++..+.....+.++.|
T Consensus 366 ~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 366 ELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEEECCCCSSCCEEEECC
T ss_pred EEEEecCCCCCceeEECCc
Confidence 9999998888888888776
No 212
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.94 E-value=6.9e-06 Score=71.29 Aligned_cols=211 Identities=8% Similarity=-0.023 Sum_probs=131.9
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
..+.+++++++|+++++... +++..|+.+ ++ ....... .......+.+.+++++.+... .++.|.+||.
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~~~d~ 127 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEM-------NGNRIGRITD 127 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEET-------TTTEEEEECT
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEec-------CCceEEEECC
Confidence 57899999999998887764 557788865 22 2222210 133566667776666555443 2478999998
Q ss_pred CCCcEEEEEee---CCceeEEEEeCC-eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCC
Q 020784 164 HQSRCIGELSF---RSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 164 ~~~~~~~~~~~---~~~v~~v~~~~~-~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (321)
+++... +.. ...+..+.+.++ .+.++. .+.|..||. +++... +...........+..++++.+.+. ...
T Consensus 128 -~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~-~~~ 202 (299)
T 2z2n_A 128 -DGKIRE-YELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGNDDALWFV-EII 202 (299)
T ss_dssp -TCCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEE-ETT
T ss_pred -CCCEEE-ecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEE-ccC
Confidence 555432 222 235788888865 466655 369999998 665543 322222223445566666666653 455
Q ss_pred CCcEEEEeeCCcceEE--eeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC---CcceeEEEeecC
Q 020784 238 KGQVRVEHYASKRTKF--IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP---SISAQSGLWLSS 312 (321)
Q Consensus 238 dg~V~i~d~~~~~~~~--l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g---~~~~~~~~s~d~ 312 (321)
++.|.+++. ++.... +..+...+.+|+++++|+++++...++. |.+||. +++ +..+... .....+.+ .++
T Consensus 203 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g 277 (299)
T 2z2n_A 203 GNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK-IGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGE 277 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEEET-TTE-EEEEECSSSSCCEEEEEE-CSS
T ss_pred CceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce-EEEECC-CCc-eEEEeCCCCCCccceEEe-cCC
Confidence 678888887 444433 3345678999999999998887766788 999998 565 3444321 22233455 566
Q ss_pred ceE
Q 020784 313 AWL 315 (321)
Q Consensus 313 ~~l 315 (321)
+..
T Consensus 278 ~l~ 280 (299)
T 2z2n_A 278 TIW 280 (299)
T ss_dssp CEE
T ss_pred CEE
Confidence 543
No 213
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=1.8e-06 Score=75.21 Aligned_cols=194 Identities=9% Similarity=-0.038 Sum_probs=131.6
Q ss_pred CeEEEEEcCCCCEEEEEcC---CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 87 TLLHISFNQDHGCFAAGTD---HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~---~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
....+.|++||.++++.+. +.|+++|..+++.+..... ........+..+++.+..+.. .++.+.++|.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~~g~~lyv~t~------~~~~v~viD~ 93 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM--DDSYFGEGLTLLNEKLYQVVW------LKNIGFIYDR 93 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEET------TCSEEEEEET
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec--CCCcceEEEEEeCCEEEEEEe------cCCEEEEEEC
Confidence 4678999999876665542 5588999999988766654 221111123334566666664 4689999999
Q ss_pred CCCcEEEEEeeC-CceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCC--CC-ceEEEeeCCCceEEEeecCCC
Q 020784 164 HQSRCIGELSFR-SEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIAN--PK-GLCAVSQGVGSLVLVCPGLQK 238 (321)
Q Consensus 164 ~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~--~~-~~~~~s~~~d~~~la~sGs~d 238 (321)
.+++.+.++... ..-..++...+.++++. ++.|.++|..+.+.+.++..... ++ ....+.+. ++.+.+. ...+
T Consensus 94 ~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn-~~~~ 171 (266)
T 2iwa_A 94 RTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWAN-IWQT 171 (266)
T ss_dssp TTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE-ETTS
T ss_pred CCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEe-cCCC
Confidence 999999998776 55566777777777764 36999999999999988875432 21 11222222 3455553 4456
Q ss_pred CcEEEEeeCCcce-EEeecc-------------ccceeEEEECCCCC-EEEEEeCCCcEEEEEEcCCC
Q 020784 239 GQVRVEHYASKRT-KFIMAH-------------DSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 239 g~V~i~d~~~~~~-~~l~~H-------------~~~V~~vafspdg~-~las~S~Dgt~IrIWd~~tg 291 (321)
+.|.+.|..++.+ ..+.-. ....+.|+|+|+++ +++|+...++ |.+.++...
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~-v~~i~l~~~ 238 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK-LFEIKLHLV 238 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE-EEEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe-EEEEEEecc
Confidence 7888888877664 344321 13568999999975 6777777777 888877654
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.87 E-value=4.9e-07 Score=90.13 Aligned_cols=220 Identities=9% Similarity=-0.030 Sum_probs=129.0
Q ss_pred cCCCCEEEEEcC-Cc---EEEEEecC-----CceeEEee---eecCC--ceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 94 NQDHGCFAAGTD-HG---FRIYNCDP-----FREIFRRD---FERGG--GIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 94 s~dg~~lasg~~-~g---v~vw~~~~-----~~~~~~~~---~~~~~--~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
+|||++++.... .+ -.||..+. .+...... +..++ .+..+.|+++++.++.+..... ....+|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G--~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGG--SDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETT--CSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCC--CceEEEE
Confidence 389998885543 32 45787653 22221111 10122 5677889999999988763210 0125799
Q ss_pred EEeCCCCcEEEEEeeCCceeEEEEeCC-eEEEEEC---------------CEEEEEEcCCcEE--EEEEeccCCCCceEE
Q 020784 160 IWDDHQSRCIGELSFRSEVRSVKLRRD-RIIVVLE---------------QKIFVYNFADLKL--LHQIETIANPKGLCA 221 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~---------------~~I~iwd~~~~~~--~~~l~~~~~~~~~~~ 221 (321)
+||+.+++.+........+..+.|+++ .++.+.. ..|++|++.+++. ...+.....+.....
T Consensus 193 v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 193 FVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp EEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred EEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 999999987654222222356788876 4444432 1499999976541 223333333333455
Q ss_pred EeeCCCceEEEeecC----CCCcEEEEeeCCc--c-eEEeeccccceeEEEECCCCCEEEEEeC----CCcEEEEEEcCC
Q 020784 222 VSQGVGSLVLVCPGL----QKGQVRVEHYASK--R-TKFIMAHDSRIACFALTQDGQLLATSST----KGTLVRIFNTLD 290 (321)
Q Consensus 222 ~s~~~d~~~la~sGs----~dg~V~i~d~~~~--~-~~~l~~H~~~V~~vafspdg~~las~S~----Dgt~IrIWd~~t 290 (321)
+...+|+.+|++... ....|.+||..++ . ...+..+...+.... +|+|..|+..+. ++. |.+||+.+
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~-l~~~d~~~ 350 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKK-IVRVDLSG 350 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCE-EEEEECSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCE-EEEEeCCC
Confidence 566667777765332 2347888998765 5 667777766666664 489998888775 344 88999988
Q ss_pred C-cEEEEEeCCCcceeEEEeecCceEEE
Q 020784 291 G-TLLQEECCPSISAQSGLWLSSAWLRV 317 (321)
Q Consensus 291 g-~~i~~~~~g~~~~~~~~s~d~~~la~ 317 (321)
+ ....++-.++......+++++.+|.+
T Consensus 351 ~~~~~~~l~~~~~~~l~~~~~~~~~lv~ 378 (741)
T 1yr2_A 351 STPRFDTVVPESKDNLESVGIAGNRLFA 378 (741)
T ss_dssp SSCEEEEEECCCSSEEEEEEEEBTEEEE
T ss_pred CccccEEEecCCCCeEEEEEEECCEEEE
Confidence 6 24455544444333345555555433
No 215
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.86 E-value=1.8e-05 Score=68.69 Aligned_cols=212 Identities=9% Similarity=-0.012 Sum_probs=132.0
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
..+.+++++++|+++++... +++.+|+.+ ++.. ..... +...+..+.+..++++.+... .++.|..||.
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~v~~~d~ 90 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDIWFTEN-------GANKIGKLSK 90 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEET-------TTTEEEEECT
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCEEEEec-------CCCeEEEECC
Confidence 47889999999998887754 668899877 4332 22221 124566677776676554433 2478999998
Q ss_pred CCCcEEEEEeeC---CceeEEEEeCC-eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCC
Q 020784 164 HQSRCIGELSFR---SEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 164 ~~~~~~~~~~~~---~~v~~v~~~~~-~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (321)
. ++.. .+... ..+..+.+.++ .++++. ++.|..||.. ++.. .+...........+..++++.+.+. ...
T Consensus 91 ~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~-~~~ 165 (300)
T 2qc5_A 91 K-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFT-ENQ 165 (300)
T ss_dssp T-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEE-ETT
T ss_pred C-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEE-ecC
Confidence 8 5543 33322 46788888754 466665 4689999987 5543 3322212233455666666666553 455
Q ss_pred CCcEEEEeeCCcceEEe--eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC-C-CcceeEEEeecCc
Q 020784 238 KGQVRVEHYASKRTKFI--MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC-P-SISAQSGLWLSSA 313 (321)
Q Consensus 238 dg~V~i~d~~~~~~~~l--~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~-g-~~~~~~~~s~d~~ 313 (321)
++.|..++. .+....+ ..+...+..++++++|.+.++....+. |.+||. +++....... + .....+.+..+|+
T Consensus 166 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 166 NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEEEECCCCCCCceEEEECCCCC
Confidence 677888877 4443333 244567999999999998887766777 999998 6665442211 1 2223345556665
Q ss_pred e
Q 020784 314 W 314 (321)
Q Consensus 314 ~ 314 (321)
.
T Consensus 243 l 243 (300)
T 2qc5_A 243 I 243 (300)
T ss_dssp E
T ss_pred E
Confidence 3
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.84 E-value=2.1e-06 Score=75.93 Aligned_cols=214 Identities=10% Similarity=-0.020 Sum_probs=127.0
Q ss_pred CCeEEEEEcCCCC-EEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHG-CFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~-~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
.-.....|+++|+ ++.++.. +++..|+.+ ++.. .... +.+....+.+.++++++++.. .++.|.+||.
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~-~~~~-~~~~~~gl~~d~dG~l~v~~~-------~~~~v~~~~~ 114 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVD-VLLD-ATAFTNGNAVDAQQRLVHCEH-------GRRAITRSDA 114 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEE-EEEE-SCSCEEEEEECTTSCEEEEET-------TTTEEEEECT
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEE-EEeC-CCCccceeeECCCCCEEEEEC-------CCCEEEEECC
Confidence 3567899999998 4556655 457788763 3322 2222 245677788888888555433 2368999998
Q ss_pred CCCcEEEEEee-C----CceeEEEEeCCeEEEEE--------------------CCEEEEEEcCCcEEEEEEeccCCCCc
Q 020784 164 HQSRCIGELSF-R----SEVRSVKLRRDRIIVVL--------------------EQKIFVYNFADLKLLHQIETIANPKG 218 (321)
Q Consensus 164 ~~~~~~~~~~~-~----~~v~~v~~~~~~~~~~~--------------------~~~I~iwd~~~~~~~~~l~~~~~~~~ 218 (321)
+ ++....... . ..+..+.+.++..+..+ .+.|..||..+++..... .. ....
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~-~~p~ 191 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL-DHPN 191 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE-SSEE
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC-CCCc
Confidence 6 553322211 1 23566888876533332 136777777555543322 21 1112
Q ss_pred eEEEeeCCCceEEEeecCC-----CCcEEEEeeCCcceE---Ee-eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 020784 219 LCAVSQGVGSLVLVCPGLQ-----KGQVRVEHYASKRTK---FI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~-----dg~V~i~d~~~~~~~---~l-~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~ 289 (321)
-+++ ++|+..|.++.+. ++.|.+++.....+. .+ ......+..++++++|++.++. .+. |.+||.
T Consensus 192 gl~~--spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~--~~g-v~~~~~- 265 (305)
T 3dr2_A 192 GLAF--SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS--GTG-VCVFDS- 265 (305)
T ss_dssp EEEE--CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC--SSE-EEEECT-
T ss_pred ceEE--cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec--CCc-EEEECC-
Confidence 2344 4455544433333 267888887643221 11 2234556789999999976654 345 899998
Q ss_pred CCcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 290 DGTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 290 tg~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
+|+.+..+........+.|..+++.|.++
T Consensus 266 ~g~~~~~~~~~~~~~~~~f~~d~~~L~it 294 (305)
T 3dr2_A 266 DGQLLGHIPTPGTASNCTFDQAQQRLFIT 294 (305)
T ss_dssp TSCEEEEEECSSCCCEEEECTTSCEEEEE
T ss_pred CCCEEEEEECCCceeEEEEeCCCCEEEEE
Confidence 68888888765544556777788777664
No 217
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.83 E-value=1.8e-05 Score=68.67 Aligned_cols=211 Identities=8% Similarity=-0.028 Sum_probs=131.8
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeee-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
..+.+++++++|+++++... +.|..||.+ ++.. ..... .......+.+..++++.+... .++.|..+|.
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~~~~~ 132 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQL-------NGDRIGKLTA 132 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEET-------TTTEEEEECT
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEcc-------CCCeEEEECC
Confidence 47899999999998777764 557788876 4332 22211 124566677776676554433 2478999998
Q ss_pred CCCcEEEEEeeC---CceeEEEEeCC-eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCC
Q 020784 164 HQSRCIGELSFR---SEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 164 ~~~~~~~~~~~~---~~v~~v~~~~~-~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (321)
. ++.. .+... ..+..+.+.++ .++++. ++.|..||. +++... +...........+..++++.+.++ ...
T Consensus 133 ~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~-~~~ 207 (300)
T 2qc5_A 133 D-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFV-EIM 207 (300)
T ss_dssp T-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEE-ETT
T ss_pred C-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEE-ccC
Confidence 7 5544 23222 36788888764 466665 468999998 555433 332222223455566666666663 455
Q ss_pred CCcEEEEeeCCcceEE--eeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC---CcceeEEEeecC
Q 020784 238 KGQVRVEHYASKRTKF--IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP---SISAQSGLWLSS 312 (321)
Q Consensus 238 dg~V~i~d~~~~~~~~--l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g---~~~~~~~~s~d~ 312 (321)
.+.|.+++.. +.... +..+...+.+|+++++|+++++...++. |.+||. +++.. .+... .....+.+..+|
T Consensus 208 ~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g 283 (300)
T 2qc5_A 208 GNKIGRITTT-GEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ-IGRITN-DNTIQ-EYQLQTENAEPHGITFGKDG 283 (300)
T ss_dssp TTEEEEECTT-CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECT-TSCEE-EEECCSTTCCCCCEEECTTS
T ss_pred CCEEEEEcCC-CcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe-EEEECC-CCcEE-EEECCccCCccceeEeCCCC
Confidence 6678888873 33332 3345677999999999998887766788 999998 56543 34222 223344555666
Q ss_pred ce
Q 020784 313 AW 314 (321)
Q Consensus 313 ~~ 314 (321)
+.
T Consensus 284 ~l 285 (300)
T 2qc5_A 284 SV 285 (300)
T ss_dssp CE
T ss_pred CE
Confidence 54
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.77 E-value=1e-08 Score=93.93 Aligned_cols=187 Identities=10% Similarity=-0.011 Sum_probs=96.2
Q ss_pred CCCEEEEEcCC-cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEee
Q 020784 96 DHGCFAAGTDH-GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (321)
Q Consensus 96 dg~~lasg~~~-gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (321)
++.++++|+.+ .+..||..+++.+..... +.+....+..++..++..+ .|+.|+.||.++|+.+....+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s-------~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDP-------NDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECT-------TTCCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeC-------CCCEEEEEECCCCceeeeeec
Confidence 46667777764 588999999998776653 3332222223333443323 579999999998887655543
Q ss_pred CC--cee-EEEE-eCCeEEEE-ECCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCc
Q 020784 175 RS--EVR-SVKL-RRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK 249 (321)
Q Consensus 175 ~~--~v~-~v~~-~~~~~~~~-~~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~ 249 (321)
+. .+. +..+ ..+.++++ .++.|+.||..+++.+.++..+.. ..+++ ++..++ .|+.||.|+.||..++
T Consensus 78 ~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p--~~~~v~-~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 78 TIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSP--STSLLY-LGRTEYTITMYDTKTR 150 (369)
T ss_dssp CHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------------------EE-EEEEEEEEECCCSSSS
T ss_pred cCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccc--cCCEEE-EEecCCEEEEEECCCC
Confidence 31 111 1111 23334444 356899999999999888765431 22333 334444 3788899999998776
Q ss_pred ceE-EeeccccceeEEEECCCC---CEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCc
Q 020784 250 RTK-FIMAHDSRIACFALTQDG---QLLATSSTKGTLVRIFNTLDGTLLQEECCPSI 302 (321)
Q Consensus 250 ~~~-~l~~H~~~V~~vafspdg---~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~ 302 (321)
.+. .+..+. ....+++.++ ..+..++.||. |+.||.++|+++-+++.+..
T Consensus 151 ~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~~~~p 204 (369)
T 2hz6_A 151 ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGL-VVTVDSESGDVLWIQNYASP 204 (369)
T ss_dssp SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCE-EEEECTTTCCEEEEEECSSC
T ss_pred CEEEeEeccc--ccCccccCCccccceEEEECCCCE-EEEEECCCCcEEEEecCCCc
Confidence 543 333221 2334455432 45666888999 99999999999888865443
No 219
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.77 E-value=1.9e-05 Score=68.70 Aligned_cols=176 Identities=11% Similarity=0.020 Sum_probs=123.9
Q ss_pred EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCC--ceeEEEEeCCeEEEEE--CCEEEEEEcCCcEE
Q 020784 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVVL--EQKIFVYNFADLKL 206 (321)
Q Consensus 131 ~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~--~~~I~iwd~~~~~~ 206 (321)
..+.+.+++ .+..++|.. .++.|++.|..+++.+..+.... ....+.+..+.++++. ++.+.++|..+++.
T Consensus 24 ~Gl~~~~dg-~Lyvstg~~----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 24 QGLVYAEND-TLFESTGLY----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEECSTT-EEEEEECST----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEE
T ss_pred ccEEEeCCC-eEEEECCCC----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcE
Confidence 566776654 555554321 35789999999999999887654 3346778888898887 57999999999999
Q ss_pred EEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEee--ccc---cceeEEEECCCCCEEEEEeCCC
Q 020784 207 LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIM--AHD---SRIACFALTQDGQLLATSSTKG 280 (321)
Q Consensus 207 ~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~--~H~---~~V~~vafspdg~~las~S~Dg 280 (321)
+.++... .+.+ ..+++++. .+++ +. .+++|.+.|..+.. ...+. .+. ..++.+.|. +|.++|....++
T Consensus 99 ~~~i~~g-~~~g-~glt~Dg~-~l~v-s~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 99 IKNFTHQ-MKDG-WGLATDGK-ILYG-SD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp EEEEECC-SSSC-CEEEECSS-SEEE-EC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EEEEECC-CCCe-EEEEECCC-EEEE-EC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 9999765 2333 45677653 3444 23 46799999987644 33333 121 246788888 787777776677
Q ss_pred cEEEEEEcCCCcEEEEEeCCC--------------cceeEEEeecCceEEEe
Q 020784 281 TLVRIFNTLDGTLLQEECCPS--------------ISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 281 t~IrIWd~~tg~~i~~~~~g~--------------~~~~~~~s~d~~~la~~ 318 (321)
. |.+.|..+|+++.++..+. ....+++.++++.|-|+
T Consensus 173 ~-V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 173 C-IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp E-EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred e-EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 7 9999999999999997641 12456778888776553
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.74 E-value=6e-07 Score=82.09 Aligned_cols=207 Identities=9% Similarity=0.012 Sum_probs=121.7
Q ss_pred EEEEcCCCCEEEEEc-----------CCcEEEEEecCCceeEEeeeec-------CCceEEEEEecCCCeEEEEeCCCCC
Q 020784 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFER-------GGGIGVVEMLFRCNILALVGGGPDP 151 (321)
Q Consensus 90 ~v~fs~dg~~lasg~-----------~~gv~vw~~~~~~~~~~~~~~~-------~~~v~~v~~~~~~~~~~~~sg~~~~ 151 (321)
.+.|+|||++|.++. ++.|.+||..+.+....... . ...-..+.++++++.+.++..+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v-~~~~~~~~g~~P~~ia~SpDGk~lyVan~~--- 144 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIEL-PDAPRFSVGPRVHIIGNCASSACLLFFLFG--- 144 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEE-TTSCSCCBSCCTTSEEECTTSSCEEEEECS---
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEEC-CCccccccCCCcceEEEcCCCCEEEEEccC---
Confidence 799999999888775 24588999999988766654 1 0123456788999988887632
Q ss_pred CCCCCcEEE--EeCCCCcEEEEEeeCCc-------------------eeEEEEeC-------------------------
Q 020784 152 QYPLNKVMI--WDDHQSRCIGELSFRSE-------------------VRSVKLRR------------------------- 185 (321)
Q Consensus 152 ~~~d~~v~i--WD~~~~~~~~~~~~~~~-------------------v~~v~~~~------------------------- 185 (321)
..+.|.+ +|..+ +.++..... +..+....
T Consensus 145 --~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~ 219 (368)
T 1mda_H 145 --SSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQA 219 (368)
T ss_dssp --SSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEE
T ss_pred --CCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcccc
Confidence 1366888 88866 333322110 11111110
Q ss_pred ---CeEEEEECCEEEEEEcCCc--EEEEEEecc----------CCCCceEEEeeCCCceEEEeec-C-C-----CCcEEE
Q 020784 186 ---DRIIVVLEQKIFVYNFADL--KLLHQIETI----------ANPKGLCAVSQGVGSLVLVCPG-L-Q-----KGQVRV 243 (321)
Q Consensus 186 ---~~~~~~~~~~I~iwd~~~~--~~~~~l~~~----------~~~~~~~~~s~~~d~~~la~sG-s-~-----dg~V~i 243 (321)
..++....+.|.+.|+... +.+..+... ......++++++++..+++. . . . ++.+.+
T Consensus 220 ~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~-~~~~~~~~~~~~~~~V 298 (368)
T 1mda_H 220 NYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT-VEHSRSCLAAAENTSS 298 (368)
T ss_dssp TTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE-EECSSCTTSCEEEEEE
T ss_pred ccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEe-ccccCcccccCCCEEE
Confidence 0011110134555555321 222222110 00112256776654444332 2 1 1 234558
Q ss_pred EeeCCcc-eEEeeccccceeEEEECCCCC-EEEEEe-CCCcEEEEEEcCCCcEEEEEeCCCcceeEEE
Q 020784 244 EHYASKR-TKFIMAHDSRIACFALTQDGQ-LLATSS-TKGTLVRIFNTLDGTLLQEECCPSISAQSGL 308 (321)
Q Consensus 244 ~d~~~~~-~~~l~~H~~~V~~vafspdg~-~las~S-~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~ 308 (321)
+|..+.+ +..+.... ....|+|+|||+ ++++.. .+++ |.|+|+.+++.++++..|...-.+.+
T Consensus 299 iD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~-VsVID~~t~kvv~~I~vg~~P~~i~~ 364 (368)
T 1mda_H 299 VTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEV-LDIYDAASDQDQSSVELDKGPESLSV 364 (368)
T ss_dssp EESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTE-EEEEESSSCEEEEECCCCSCCCEEEC
T ss_pred EECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCe-EEEEECCCCcEEEEEECCCCCCEEEe
Confidence 9987765 34444333 689999999997 567776 5899 99999999999999987776555543
No 221
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.71 E-value=2e-06 Score=82.50 Aligned_cols=219 Identities=13% Similarity=0.050 Sum_probs=139.8
Q ss_pred CCCCEEEEEcC-C-cEEEEEecCCceeEEeeeecCCceEEEEE-e-cCCCeEEEEeCCCC-------C----CCCCCcEE
Q 020784 95 QDHGCFAAGTD-H-GFRIYNCDPFREIFRRDFERGGGIGVVEM-L-FRCNILALVGGGPD-------P----QYPLNKVM 159 (321)
Q Consensus 95 ~dg~~lasg~~-~-gv~vw~~~~~~~~~~~~~~~~~~v~~v~~-~-~~~~~~~~~sg~~~-------~----~~~d~~v~ 159 (321)
+||++|..... + .|.+.|+++++.....+.........+.+ . +++.++.+.+.... . .-.++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 48998877655 3 37899999998765334312344555555 4 78888876642110 0 01246899
Q ss_pred EEeCCCCcEEEEEeeCCceeEEEEeCC--eEEEEEC---------------------------------------CEEEE
Q 020784 160 IWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLE---------------------------------------QKIFV 198 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~---------------------------------------~~I~i 198 (321)
+.|.++.+.+.++........+.++++ .++++.. +.|.+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 999999998888776545555555443 2333221 23777
Q ss_pred EEcCC--cEE-EEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc------------eE-Eeecccccee
Q 020784 199 YNFAD--LKL-LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR------------TK-FIMAHDSRIA 262 (321)
Q Consensus 199 wd~~~--~~~-~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~------------~~-~l~~H~~~V~ 262 (321)
.|..+ ++. +..+.....+. .+.+++ |+.++.+++..+.+|.++|+.... +. .+ .-....+
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~Ph-Gv~~sP--DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~ 334 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPH-GCNMAP--DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPL 334 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCC-CEEECT--TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEE
T ss_pred EeCcccCCceeEEEEecCCCce-EEEEcC--CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcc
Confidence 77766 434 45555443333 344444 567777778888999999987532 11 11 1234589
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEEcCC----------CcEEEEEeCCCcceeE------EEeecCceEEEe
Q 020784 263 CFALTQDGQLLATSSTKGTLVRIFNTLD----------GTLLQEECCPSISAQS------GLWLSSAWLRVL 318 (321)
Q Consensus 263 ~vafspdg~~las~S~Dgt~IrIWd~~t----------g~~i~~~~~g~~~~~~------~~s~d~~~la~~ 318 (321)
.++|+|+|...++.-.|+. |-+||+.+ .+.+.++..+-..-.. .+++||+||.++
T Consensus 335 h~aF~~dG~aY~t~~ldsq-V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQ-VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EEEECTTSEEEEEETTTTE-EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred eEEECCCCeEEEEEecCCc-EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 9999999954555666777 99999988 6788888875443222 446999999775
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.68 E-value=1.6e-05 Score=71.09 Aligned_cols=188 Identities=11% Similarity=0.000 Sum_probs=110.0
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeec---CCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEE
Q 020784 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFER---GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~---~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iW 161 (321)
...|.+++|++||+++++. .+++.+||.++++......... ...+..+.+.+++++.+...+... ....+.|..+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA-ETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC-CTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC-CCCceEEEEE
Confidence 3579999999999977765 6778899987776432222100 123566777788875544332100 0012345555
Q ss_pred eCCCCcEEEEEeeCCceeEEEEeCCe--EEEEE--CCEEEEEEcC--Cc-EEE--EEEecc-CCCCceEEEeeCCCceEE
Q 020784 162 DDHQSRCIGELSFRSEVRSVKLRRDR--IIVVL--EQKIFVYNFA--DL-KLL--HQIETI-ANPKGLCAVSQGVGSLVL 231 (321)
Q Consensus 162 D~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~--~~~I~iwd~~--~~-~~~--~~l~~~-~~~~~~~~~s~~~d~~~l 231 (321)
| +++.............++|+++. ++++. .+.|.+|++. ++ ++. +.+... ......-.+..+.++.+.
T Consensus 167 ~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw 244 (326)
T 2ghs_A 167 A--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW 244 (326)
T ss_dssp E--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE
T ss_pred e--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE
Confidence 5 45443322222346678888763 55654 3699999985 55 311 122111 111223345566666666
Q ss_pred EeecCCCCcEEEEeeCCcceEEeeccccceeEEEEC-CCCCEEEEEe
Q 020784 232 VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALT-QDGQLLATSS 277 (321)
Q Consensus 232 a~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafs-pdg~~las~S 277 (321)
++ ...++.|..|+...+.+..+..+...+++++|+ +++..|..++
T Consensus 245 va-~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 245 NA-RWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EE-EETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EE-EeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 53 334567888887555556777777789999998 8887654443
No 223
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.67 E-value=6.5e-06 Score=71.20 Aligned_cols=148 Identities=7% Similarity=-0.044 Sum_probs=107.2
Q ss_pred CCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeE--EEEeCCeEEEEE--CCEEEEEEcCCcEEEEEEecc
Q 020784 138 RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRS--VKLRRDRIIVVL--EQKIFVYNFADLKLLHQIETI 213 (321)
Q Consensus 138 ~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~--v~~~~~~~~~~~--~~~I~iwd~~~~~~~~~l~~~ 213 (321)
+++.+..++|. ++.|+++|+++++.+..+ ....... +.+..+++++++ ++.+.+||..+++.+.++...
T Consensus 63 ~~~~Ly~stG~------~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~ 135 (268)
T 3nok_A 63 HQGHFFESTGH------QGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS 135 (268)
T ss_dssp ETTEEEEEETT------TTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS
T ss_pred ECCEEEEEcCC------CCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC
Confidence 35566666653 577999999999988888 7766544 788888998887 679999999999999999875
Q ss_pred CCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEee--cccc---ceeEEEECCCCCEEEEEeCCCcEEEEEE
Q 020784 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIM--AHDS---RIACFALTQDGQLLATSSTKGTLVRIFN 287 (321)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~--~H~~---~V~~vafspdg~~las~S~Dgt~IrIWd 287 (321)
... ..+++++ +.+++ + +.+++|.++|..+.. +..+. .+.. .++.+.|. +|+++|....++. |.+.|
T Consensus 136 ~eG---wGLt~Dg-~~L~v-S-dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~-I~vID 207 (268)
T 3nok_A 136 GEG---WGLCYWN-GKLVR-S-DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD-VLEID 207 (268)
T ss_dssp SCC---CCEEEET-TEEEE-E-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE-EEEEC
T ss_pred Cce---eEEecCC-CEEEE-E-CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe-EEEEe
Confidence 333 2334544 24444 3 347789999877654 33332 2322 35677777 8888877766777 99999
Q ss_pred cCCCcEEEEEeCC
Q 020784 288 TLDGTLLQEECCP 300 (321)
Q Consensus 288 ~~tg~~i~~~~~g 300 (321)
.++|+++.++..+
T Consensus 208 p~TG~V~~~Idl~ 220 (268)
T 3nok_A 208 PATGTVVGVIDAS 220 (268)
T ss_dssp TTTCBEEEEEECH
T ss_pred CCCCcEEEEEECC
Confidence 9999999998754
No 224
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.67 E-value=2.7e-05 Score=67.21 Aligned_cols=156 Identities=10% Similarity=0.092 Sum_probs=109.1
Q ss_pred EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeE--EEEeCCeEEEEE--CCEEEEEEcCCcEE
Q 020784 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRS--VKLRRDRIIVVL--EQKIFVYNFADLKL 206 (321)
Q Consensus 131 ~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~--v~~~~~~~~~~~--~~~I~iwd~~~~~~ 206 (321)
..+.+. + ..+..++|.. ....|+++|+++++.+..+.....+.. +.+..+++++++ ++.+.+||..+++.
T Consensus 46 qGL~~~-~-~~LyestG~~----g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 46 EGFFYR-N-GYFYESTGLN----GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEE-T-TEEEEEEEET----TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred ceEEEE-C-CEEEEECCCC----CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence 445555 3 3454444321 124899999999999999888776544 778888998887 67999999999999
Q ss_pred EEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeec--cc---cceeEEEECCCCCEEEEEeCCC
Q 020784 207 LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA--HD---SRIACFALTQDGQLLATSSTKG 280 (321)
Q Consensus 207 ~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~--H~---~~V~~vafspdg~~las~S~Dg 280 (321)
+.++...... ..+++++ +.++++ +.+++|.+.|..+.. +..+.- .. ..++.+.|. +|+++|..-.++
T Consensus 120 ~~ti~~~~eG---~glt~dg-~~L~~S--dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~ 192 (262)
T 3nol_A 120 VRSFNYDGEG---WGLTHND-QYLIMS--DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTN 192 (262)
T ss_dssp EEEEECSSCC---CCEEECS-SCEEEC--CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EEEEECCCCc---eEEecCC-CEEEEE--CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCC
Confidence 9999875432 3344554 234442 335789989877644 333322 22 335567776 788887776677
Q ss_pred cEEEEEEcCCCcEEEEEeCC
Q 020784 281 TLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 281 t~IrIWd~~tg~~i~~~~~g 300 (321)
. |.+.|.++|+++.++..+
T Consensus 193 ~-I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 193 K-IVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp E-EEEECTTTCBEEEEEECT
T ss_pred e-EEEEECCCCcEEEEEECC
Confidence 7 999999999999998764
No 225
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.65 E-value=1.1e-05 Score=69.58 Aligned_cols=183 Identities=8% Similarity=0.018 Sum_probs=122.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC---cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDH---GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~---gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
...-...+.|+ ++.++.+.+.. .++++|.++++.+....+ ........+...++.+..+.. .++.+.+
T Consensus 41 ~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw------~~~~v~v 111 (262)
T 3nol_A 41 TKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTW------KNGLGFV 111 (262)
T ss_dssp TTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEES------SSSEEEE
T ss_pred CCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEe------eCCEEEE
Confidence 33456889999 67666665553 488999999998777665 333322223334566666664 4689999
Q ss_pred EeCCCCcEEEEEeeCCceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCC--CCc-eEEEeeCCCceEEEeecC
Q 020784 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIAN--PKG-LCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~--~~~-~~~~s~~~d~~~la~sGs 236 (321)
+|.++.+.+.++.....-..++...+.++++. +++|.++|..+++.+.++....+ ++. ...+.+. ++.+.|. .-
T Consensus 112 ~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan-~w 189 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFAN-VW 189 (262)
T ss_dssp EETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEE-ET
T ss_pred EECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEE-Ec
Confidence 99999999999998776677888777777764 46899999999999998876432 221 1112222 3466553 44
Q ss_pred CCCcEEEEeeCCcceE-Eeecc------------ccceeEEEECCCCCEEEEEe
Q 020784 237 QKGQVRVEHYASKRTK-FIMAH------------DSRIACFALTQDGQLLATSS 277 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~-~l~~H------------~~~V~~vafspdg~~las~S 277 (321)
.+..|.+.|..++.+. .+... ....+.|||+|+++.|...+
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 5667888888776643 33221 13568999999876554444
No 226
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.62 E-value=1.5e-05 Score=73.80 Aligned_cols=187 Identities=8% Similarity=-0.078 Sum_probs=117.9
Q ss_pred EEEcCCCCEEEEEcC-C--cEEEEEecCCceeEEe-ee-e-cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 91 ISFNQDHGCFAAGTD-H--GFRIYNCDPFREIFRR-DF-E-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 91 v~fs~dg~~lasg~~-~--gv~vw~~~~~~~~~~~-~~-~-~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
++|+++|++|+++.. . .+.+|+.......... .. . .......+++.++...+.++. .++.|..||..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d-------~~~~I~~~d~~ 248 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD-------SNKNFGRFNVK 248 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC-------TTCEEEEEETT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE-------CCCcEEEEECC
Confidence 899999998887766 3 4556666544332222 00 0 123445667777445555544 35789999998
Q ss_pred CCcEEEE----EeeCC--cee-EEEEeC--CeEEEEEC--CEEEEEEcCCcEEEEEEeccCC-------------CCceE
Q 020784 165 QSRCIGE----LSFRS--EVR-SVKLRR--DRIIVVLE--QKIFVYNFADLKLLHQIETIAN-------------PKGLC 220 (321)
Q Consensus 165 ~~~~~~~----~~~~~--~v~-~v~~~~--~~~~~~~~--~~I~iwd~~~~~~~~~l~~~~~-------------~~~~~ 220 (321)
++..... ..... .+. .++|++ ..++++.. +.|+.|+.... +..+.+... -....
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~ 326 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPN 326 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEE
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCe
Confidence 7764322 11111 234 899997 35666643 58999987643 334433210 01234
Q ss_pred EEeeCCCceEEEeecC-CCCcEEEEeeCCcceEEeecc---------------ccceeEEEECCCCCEEEEEeCCCcEEE
Q 020784 221 AVSQGVGSLVLVCPGL-QKGQVRVEHYASKRTKFIMAH---------------DSRIACFALTQDGQLLATSSTKGTLVR 284 (321)
Q Consensus 221 ~~s~~~d~~~la~sGs-~dg~V~i~d~~~~~~~~l~~H---------------~~~V~~vafspdg~~las~S~Dgt~Ir 284 (321)
.+..++++.+++ +.. .++.|+.++...+.+.++.++ -..+..|+++++|.++++-..++. ||
T Consensus 327 gia~d~dG~lyv-ad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~-Ir 404 (409)
T 3hrp_A 327 GMTVDEDGNFYI-VDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKA-IR 404 (409)
T ss_dssp EEEECTTCCEEE-EETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCE-EE
T ss_pred EEEEeCCCCEEE-EeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCe-EE
Confidence 455566666665 366 778999999767777777665 246899999999998888887777 88
Q ss_pred EEEc
Q 020784 285 IFNT 288 (321)
Q Consensus 285 IWd~ 288 (321)
.+++
T Consensus 405 ~i~~ 408 (409)
T 3hrp_A 405 KYAV 408 (409)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8765
No 227
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.61 E-value=2.3e-05 Score=68.93 Aligned_cols=193 Identities=6% Similarity=0.008 Sum_probs=112.1
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeec---CCceEEEEEecCCCeEEEEeCCCCC--CCCCCcEE
Q 020784 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFER---GGGIGVVEMLFRCNILALVGGGPDP--QYPLNKVM 159 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~---~~~v~~v~~~~~~~~~~~~sg~~~~--~~~d~~v~ 159 (321)
...+.+++|++||+++++ ..+++.+||.++++......... ......+.+.+++++.+...+.... ......-+
T Consensus 53 ~~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVAT-IGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SSCEEEEEEBTTSSEEEE-ETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CCceEEEEECCCCCEEEE-ECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcE
Confidence 357999999999996555 47789999988776533222100 1235667778888865543321100 00123345
Q ss_pred EEeCCC-CcEEEEEeeCCceeEEEEeCC--eEEEEE--CCEEEEEEc--CCcEEE--EEEecc-CCCCceEEEeeCCCce
Q 020784 160 IWDDHQ-SRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNF--ADLKLL--HQIETI-ANPKGLCAVSQGVGSL 229 (321)
Q Consensus 160 iWD~~~-~~~~~~~~~~~~v~~v~~~~~--~~~~~~--~~~I~iwd~--~~~~~~--~~l~~~-~~~~~~~~~s~~~d~~ 229 (321)
||.+.. ++.......-.....++|+++ .++++. .+.|.+|++ .++.+. +.+... ......-.+..+.++.
T Consensus 132 l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp EEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred EEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence 555442 343333333345678899875 355554 368999987 455432 222111 1111233445556666
Q ss_pred EEEeecCCCCcEEEEeeCCcc-eEEeeccccceeEEEEC-CCCCEE-EEEeCC
Q 020784 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALT-QDGQLL-ATSSTK 279 (321)
Q Consensus 230 ~la~sGs~dg~V~i~d~~~~~-~~~l~~H~~~V~~vafs-pdg~~l-as~S~D 279 (321)
+.++ ...++.|..|+..++. +..+..+...+++++|. |+++.| +|...+
T Consensus 212 lwva-~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 212 LWVA-CYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEE-EETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEE-EcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 6653 4556778889987544 56777777889999998 887654 444433
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.60 E-value=0.00018 Score=61.90 Aligned_cols=216 Identities=7% Similarity=-0.116 Sum_probs=126.1
Q ss_pred CeEEEEEcCCCCEEEEEc-C-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 87 TLLHISFNQDHGCFAAGT-D-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~-~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
....++|++++..|..+. . +.|.+++.+.......... .......+++.+.+..+.++..+ .+.|.++|.+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~ia~d~~~~~lyv~d~~------~~~I~~~~~~ 109 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ-DLGSPEGIALDHLGRTIFWTDSQ------LDRIEVAKMD 109 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT-TCCCEEEEEEETTTTEEEEEETT------TTEEEEEETT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC-CCCCccEEEEEecCCeEEEEECC------CCEEEEEEcC
Confidence 467899999766555444 3 4577888765543222211 11345667777766666665532 4789999986
Q ss_pred CCcEEEEEeeC-CceeEEEEeC--CeEEEEEC----CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCC
Q 020784 165 QSRCIGELSFR-SEVRSVKLRR--DRIIVVLE----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 165 ~~~~~~~~~~~-~~v~~v~~~~--~~~~~~~~----~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (321)
.......+... ..+..+++++ ..++++.. +.|..+++... ....+... .......+..++++..|.++...
T Consensus 110 g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~-~~~~P~gia~d~~~~~lyv~d~~ 187 (267)
T 1npe_A 110 GTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQD-NLGLPNGLTFDAFSSQLCWVDAG 187 (267)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECT-TCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEEC-CCCCCcEEEEcCCCCEEEEEECC
Confidence 54322222222 3577888986 45666642 47888887532 22333211 11122333344433323223566
Q ss_pred CCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC--cceeEEEeecCc
Q 020784 238 KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS--ISAQSGLWLSSA 313 (321)
Q Consensus 238 dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~--~~~~~~~s~d~~ 313 (321)
.+.|.+++........+.........|++. ++.++++....+. |.++|..+|+.+.++..+. ....+.+.+++.
T Consensus 188 ~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~-v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 188 THRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNS-VIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTE-EEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCe-EEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 678888887654433332223445677775 4555555545566 9999999999999997665 355677777764
No 229
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.60 E-value=1.5e-05 Score=68.98 Aligned_cols=183 Identities=9% Similarity=0.060 Sum_probs=122.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 82 SSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
+....-...+.|+. +.++.+.+. +.++++|.++++.+... + ........+...++.+..+.. .++.+.+
T Consensus 51 hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l--~~~~FgeGit~~g~~Ly~ltw------~~~~v~V 120 (268)
T 3nok_A 51 HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R--LGNIFAEGLASDGERLYQLTW------TEGLLFT 120 (268)
T ss_dssp CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E--CTTCCEEEEEECSSCEEEEES------SSCEEEE
T ss_pred CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C--CCCcceeEEEEeCCEEEEEEc------cCCEEEE
Confidence 33444567889984 555555555 45889999999887766 5 333222223345566666653 4689999
Q ss_pred EeCCCCcEEEEEeeCCceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCCCCc---eEEEeeCCCceEEEeecC
Q 020784 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKG---LCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~~---~~~~s~~~d~~~la~sGs 236 (321)
+|.++++.+.++.....-..++...+.++++. +++|.++|..+++.+.++.....+.. ...+.+. ++.+.|. ..
T Consensus 121 ~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan-vw 198 (268)
T 3nok_A 121 WSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN-IW 198 (268)
T ss_dssp EETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE-ET
T ss_pred EECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE-EC
Confidence 99999999999998777778888888887775 46999999999999998876433221 1222222 4455552 44
Q ss_pred CCCcEEEEeeCCcceE-Eeecc-------------ccceeEEEECCCC-CEEEEE
Q 020784 237 QKGQVRVEHYASKRTK-FIMAH-------------DSRIACFALTQDG-QLLATS 276 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~-~l~~H-------------~~~V~~vafspdg-~~las~ 276 (321)
.+..|.+.|..++.+. .+... .+..+.|||+|++ ++|+||
T Consensus 199 ~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 199 HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5667888887776643 33211 1356899999975 566665
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.58 E-value=4.3e-06 Score=76.39 Aligned_cols=202 Identities=8% Similarity=-0.092 Sum_probs=122.1
Q ss_pred cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCC---CCCCCcEEEEeCCCCcEEEEEeeC--------
Q 020784 107 GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP---QYPLNKVMIWDDHQSRCIGELSFR-------- 175 (321)
Q Consensus 107 gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~---~~~d~~v~iWD~~~~~~~~~~~~~-------- 175 (321)
.|.++|.++++.+...... ..+ .+.+++++..+.++...... .-.+++|.+||..+++.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~vG-~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGA-FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEEC-TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCC-CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 6679999999887776651 234 68899999988887521000 002588999999999999998765
Q ss_pred CceeEEEEeCC--eEEEEE---CCEEEE--EEcCCcEEEEEEeccCCC----------------CceEEEeeC-------
Q 020784 176 SEVRSVKLRRD--RIIVVL---EQKIFV--YNFADLKLLHQIETIANP----------------KGLCAVSQG------- 225 (321)
Q Consensus 176 ~~v~~v~~~~~--~~~~~~---~~~I~i--wd~~~~~~~~~l~~~~~~----------------~~~~~~s~~------- 225 (321)
..+..+.++++ .++++. ++.|.+ +|..+ ++++...... .....+...
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCC
Confidence 34667888875 466664 357888 88866 3444321100 000001000
Q ss_pred --------------------CCceEEEeecCCCCcEEEEeeCCcceEE---ee-------cc---ccceeEEEECCCCCE
Q 020784 226 --------------------VGSLVLVCPGLQKGQVRVEHYASKRTKF---IM-------AH---DSRIACFALTQDGQL 272 (321)
Q Consensus 226 --------------------~d~~~la~sGs~dg~V~i~d~~~~~~~~---l~-------~H---~~~V~~vafspdg~~ 272 (321)
.++.++.+ +. |.|.+.|........ +. .+ ......++|+|||++
T Consensus 201 ~v~~~~t~~i~vg~~P~~~~~~~~~~~v--s~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~ 277 (368)
T 1mda_H 201 IVGAQCTGAQNCSSQAAQANYPGMLVWA--VA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDG 277 (368)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEEC--BS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTE
T ss_pred eEEEEeeeeeeCCCCccccccCCEEEEE--cC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCE
Confidence 01111111 12 455555543221111 10 01 111223789999887
Q ss_pred EEEEeC---------CCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 273 LATSST---------KGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 273 las~S~---------Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
|..+.. ++. +.|+|+.+++.++++..+.....+.+++||++|.++
T Consensus 278 lyV~~~~~~~~~~~~~~~-~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va 331 (368)
T 1mda_H 278 IMILTVEHSRSCLAAAEN-TSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYA 331 (368)
T ss_dssp EEEEEEECSSCTTSCEEE-EEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEE
T ss_pred EEEEeccccCcccccCCC-EEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEE
Confidence 665432 234 569999999999999888777788999999876554
No 231
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.55 E-value=0.00013 Score=62.28 Aligned_cols=157 Identities=15% Similarity=0.105 Sum_probs=110.2
Q ss_pred eEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCcee--EEEEeCCeEEEEE--CCEEEEEEcCCcE
Q 020784 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVR--SVKLRRDRIIVVL--EQKIFVYNFADLK 205 (321)
Q Consensus 130 v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~--~v~~~~~~~~~~~--~~~I~iwd~~~~~ 205 (321)
...+++. +..+..++|.. ....|+++|+++++.+..+.....+. .+.+..+++++.+ ++.+.+||..+++
T Consensus 23 tqGL~~~--~~~LyestG~~----g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 23 TEGLFYL--RGHLYESTGET----GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEEEEEE--TTEEEEEECCT----TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred cccEEEE--CCEEEEECCCC----CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence 3445544 45566555432 23589999999999999988876654 4677788988887 6799999999999
Q ss_pred EEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcc-eEEeec--cc---cceeEEEECCCCCEEEEEeCC
Q 020784 206 LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA--HD---SRIACFALTQDGQLLATSSTK 279 (321)
Q Consensus 206 ~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~-~~~l~~--H~---~~V~~vafspdg~~las~S~D 279 (321)
.+.++...... ..++.++ +.+++ | ..++.|.++|..+.. +..+.- +. ..++.+.+. +|+.+|..-.+
T Consensus 97 ~~~ti~~~~~G---wglt~dg-~~L~v-S-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s 169 (243)
T 3mbr_X 97 PRARFRYPGEG---WALTSDD-SHLYM-S-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLT 169 (243)
T ss_dssp EEEEEECSSCC---CEEEECS-SCEEE-E-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTT
T ss_pred EEEEEeCCCCc---eEEeeCC-CEEEE-E-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCC
Confidence 99999875433 3445554 34444 2 346789999877644 333322 22 245666765 78888777667
Q ss_pred CcEEEEEEcCCCcEEEEEeCC
Q 020784 280 GTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 280 gt~IrIWd~~tg~~i~~~~~g 300 (321)
+. |.+.|.++|+++.++..+
T Consensus 170 ~~-I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 170 SR-IARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp TE-EEEECTTTCBEEEEEECG
T ss_pred Ce-EEEEECCCCCEEEEEECC
Confidence 77 999999999999998744
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.54 E-value=6.2e-06 Score=81.46 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=59.9
Q ss_pred CcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce--eEEEeecC-ceE
Q 020784 239 GQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA--QSGLWLSS-AWL 315 (321)
Q Consensus 239 g~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~--~~~~s~d~-~~l 315 (321)
|.|..||..++++.--..+...+....+..+|.++..++.||. +++||+++|+++.++..+.... -+.+..+| +|+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~-l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGR-LVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCc-EEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 6788899988776544445566677777778888888999999 9999999999999998766433 34556788 466
Q ss_pred EEe
Q 020784 316 RVL 318 (321)
Q Consensus 316 a~~ 318 (321)
+++
T Consensus 536 ~~~ 538 (677)
T 1kb0_A 536 SVA 538 (677)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.51 E-value=8.9e-05 Score=63.37 Aligned_cols=182 Identities=10% Similarity=0.025 Sum_probs=120.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC---cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 84 PPPTLLHISFNQDHGCFAAGTDH---GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~~---gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
...-...+.|+. +.++.+.+.. .++++|+++++.+....+ ........+...++.+..+.. .++.+.+
T Consensus 19 ~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l--~~~~fgeGi~~~~~~ly~ltw------~~~~v~v 89 (243)
T 3mbr_X 19 TTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV--PPPYFGAGIVAWRDRLIQLTW------RNHEGFV 89 (243)
T ss_dssp TTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEES------SSSEEEE
T ss_pred CccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC--CCCcceeEEEEeCCEEEEEEe------eCCEEEE
Confidence 334577899987 5555555553 589999999998777665 232222223334566666653 4689999
Q ss_pred EeCCCCcEEEEEeeCCceeEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCCC--C-ceEEEeeCCCceEEEeecC
Q 020784 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANP--K-GLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~--~-~~~~~s~~~d~~~la~sGs 236 (321)
+|.++.+.+.++.....-..++...+.++++. +++|.++|..+.+.++++....++ + ....+.+. ++.+.|. .-
T Consensus 90 ~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyan-vw 167 (243)
T 3mbr_X 90 YDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLAN-VW 167 (243)
T ss_dssp EETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE-ET
T ss_pred EECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEE-EC
Confidence 99999999999998877778888877777764 359999999999999988764322 1 11122222 3455553 33
Q ss_pred CCCcEEEEeeCCcceE-Eeec-------------cccceeEEEECCCCC-EEEEE
Q 020784 237 QKGQVRVEHYASKRTK-FIMA-------------HDSRIACFALTQDGQ-LLATS 276 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~-~l~~-------------H~~~V~~vafspdg~-~las~ 276 (321)
.+..|.+.|..++.+. .+.. -....+.||++|++. +|+||
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 4557777777776543 3321 123568999999765 55555
No 234
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.51 E-value=3e-05 Score=72.08 Aligned_cols=203 Identities=10% Similarity=-0.025 Sum_probs=128.8
Q ss_pred CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCC---CCCCCcEEEEeCCCCcEEEEEeeC-------
Q 020784 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP---QYPLNKVMIWDDHQSRCIGELSFR------- 175 (321)
Q Consensus 106 ~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~---~~~d~~v~iWD~~~~~~~~~~~~~------- 175 (321)
+.|.++|..+.+.+..... ...+ .+.++++++.+.++...... .-.++.|.++|..+++.+.++...
T Consensus 99 ~~VsVID~~t~~vv~~I~v-G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDG-GFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEE-CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEEC-CCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 3578999999988777765 1334 68899999988777520000 001468999999999999888764
Q ss_pred -CceeEEEEeCC--eEEEEE---CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCc
Q 020784 176 -SEVRSVKLRRD--RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK 249 (321)
Q Consensus 176 -~~v~~v~~~~~--~~~~~~---~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~ 249 (321)
.....+.++++ +++++. ++.|.++|+.+++.+.++.... +..+.+.+...+++. +.||.+.+.+....
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~--~~dG~~~~V~~~~~ 249 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMN--CRDGSLARVDFADG 249 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEE--ETTSSEEEEECCTT
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEE--cCCCCEEEEECCCC
Confidence 24566778764 577764 3689999999999999887532 234444444445543 45677776555443
Q ss_pred ceE-----Eeeccccce-eEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEE--EEEeCC-----------CcceeEEEee
Q 020784 250 RTK-----FIMAHDSRI-ACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL--QEECCP-----------SISAQSGLWL 310 (321)
Q Consensus 250 ~~~-----~l~~H~~~V-~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i--~~~~~g-----------~~~~~~~~s~ 310 (321)
.+. .+.....++ ..+.|.+++..++-.+..++ |.+.|+.+++.. .++... .....+.+++
T Consensus 250 ~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~-V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~ 328 (426)
T 3c75_H 250 ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGK-IFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR 328 (426)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSE-EEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG
T ss_pred cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCc-EEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC
Confidence 332 111112221 24578999888777788888 999999776532 222211 0111257788
Q ss_pred cCceEEEe
Q 020784 311 SSAWLRVL 318 (321)
Q Consensus 311 d~~~la~~ 318 (321)
|++.|.|+
T Consensus 329 dg~rlyVa 336 (426)
T 3c75_H 329 QSDRIYLL 336 (426)
T ss_dssp GGTEEEEE
T ss_pred CCCEEEEE
Confidence 88766554
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.47 E-value=0.00016 Score=65.36 Aligned_cols=189 Identities=10% Similarity=0.045 Sum_probs=114.0
Q ss_pred CCEEEEEcC-CcEEEEEecCCceeEEeeeec--------CCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc
Q 020784 97 HGCFAAGTD-HGFRIYNCDPFREIFRRDFER--------GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (321)
Q Consensus 97 g~~lasg~~-~gv~vw~~~~~~~~~~~~~~~--------~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~ 167 (321)
+..+.+++. +.+..||.++++.+....... ...+.. ........+.+.+ .++.|..+|.++|+
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~-------~~g~l~a~d~~tG~ 124 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGS-------EKAQVYALNTSDGT 124 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEE-------TTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEc-------CCCEEEEEECCCCC
Confidence 444555554 567899998888876665410 111211 2223345566655 46899999999999
Q ss_pred EEEEEeeCCcee-EEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCCCC-----ceEEEeeCCCceEEEeecCCCCc
Q 020784 168 CIGELSFRSEVR-SVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPK-----GLCAVSQGVGSLVLVCPGLQKGQ 240 (321)
Q Consensus 168 ~~~~~~~~~~v~-~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~~-----~~~~~s~~~d~~~la~sGs~dg~ 240 (321)
.+........+. ......+.+++.+ ++.|..+|..+++.+..+....... ....+. ++.+++ |..+|.
T Consensus 125 ~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~--g~~~g~ 199 (376)
T 3q7m_A 125 VAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FGAAVV--GGDNGR 199 (376)
T ss_dssp EEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TTEEEE--CCTTTE
T ss_pred EEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CCEEEE--EcCCCE
Confidence 887777654432 2334566677765 4689999999999888876543221 122222 234443 778888
Q ss_pred EEEEeeCCcceE-Eeecccc-------ceeEEEECC--CCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC
Q 020784 241 VRVEHYASKRTK-FIMAHDS-------RIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 241 V~i~d~~~~~~~-~l~~H~~-------~V~~vafsp--dg~~las~S~Dgt~IrIWd~~tg~~i~~~~~ 299 (321)
|..+|..++... ....... .+..+.-.| .+..+..++.++. |..+|.++|+.+.+...
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~-l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN-LTALDLRSGQIMWKREL 267 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC-EEEEETTTCCEEEEECC
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE-EEEEECCCCcEEeeccC
Confidence 988888766543 3221110 000010111 2455666778999 99999999998877653
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.47 E-value=5.9e-06 Score=81.78 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=60.4
Q ss_pred CCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce--eEEEeecC-ce
Q 020784 238 KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA--QSGLWLSS-AW 314 (321)
Q Consensus 238 dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~--~~~~s~d~-~~ 314 (321)
+|.|..||..++++.--..+...+..-.+...|.++..|+.||. |+.||.+||+++.+++.+.... -+.+..+| +|
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~-l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGR-VIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCc-EEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence 47788899988776533333344555566667888999999999 9999999999999997665533 35667888 67
Q ss_pred EEEee
Q 020784 315 LRVLR 319 (321)
Q Consensus 315 la~~~ 319 (321)
++++.
T Consensus 533 v~~~~ 537 (689)
T 1yiq_A 533 VTFMA 537 (689)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87763
No 237
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.46 E-value=2.3e-05 Score=77.56 Aligned_cols=196 Identities=13% Similarity=0.050 Sum_probs=121.4
Q ss_pred EEEEEcCCCCEEEEEcCC-c-------------EEEEEecCCce--eEEeeeec--CCceEEEEEecCCCeEEEEeCCCC
Q 020784 89 LHISFNQDHGCFAAGTDH-G-------------FRIYNCDPFRE--IFRRDFER--GGGIGVVEMLFRCNILALVGGGPD 150 (321)
Q Consensus 89 ~~v~fs~dg~~lasg~~~-g-------------v~vw~~~~~~~--~~~~~~~~--~~~v~~v~~~~~~~~~~~~sg~~~ 150 (321)
..++|+ ||+.|+.++.+ . |.+|++.+... ....+... ......+.++++++.+++......
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 467899 99988877653 1 67888876543 12222100 123556788999998877654321
Q ss_pred CCCCCCcEEEEeCCCCc-EEEEEeeCC-ceeE-EEEeCCeEEEEEC-----CEEEEEEcCCcEE--EEEEeccCCCCceE
Q 020784 151 PQYPLNKVMIWDDHQSR-CIGELSFRS-EVRS-VKLRRDRIIVVLE-----QKIFVYNFADLKL--LHQIETIANPKGLC 220 (321)
Q Consensus 151 ~~~~d~~v~iWD~~~~~-~~~~~~~~~-~v~~-v~~~~~~~~~~~~-----~~I~iwd~~~~~~--~~~l~~~~~~~~~~ 220 (321)
..+.|.+||+.++. ....+..+. .... +....+.+++.++ ..|..+|+.+++. .+.+..+.... .
T Consensus 257 ---~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~- 331 (693)
T 3iuj_A 257 ---SGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV-L- 331 (693)
T ss_dssp ---SCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-E-
T ss_pred ---CCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-E-
Confidence 34689999998763 233333322 2222 4444567776653 4799999977543 34555544333 3
Q ss_pred EEeeCCCceEEEeecCCCC--cEEEEeeCCcceEEee-ccccceeEEEECCCCCEEEEEeCC----CcEEEEEEcCCCcE
Q 020784 221 AVSQGVGSLVLVCPGLQKG--QVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTK----GTLVRIFNTLDGTL 293 (321)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg--~V~i~d~~~~~~~~l~-~H~~~V~~vafspdg~~las~S~D----gt~IrIWd~~tg~~ 293 (321)
.+++++ ..|++....+| .|++|++..+....+. .+.+.+..+.+++++..|+....+ ++ |..||+.+++.
T Consensus 332 ~~s~~g--~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~-l~~~d~~~g~~ 408 (693)
T 3iuj_A 332 TVHSGS--GYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPT-LYRFEPKSGAI 408 (693)
T ss_dssp EEEEET--TEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCE-EEEECTTTCCE
T ss_pred EEEEEC--CEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCE-EEEEECCCCeE
Confidence 777765 34444455666 5666887766555544 345678888889888766554434 77 99999988874
No 238
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.44 E-value=5.1e-05 Score=66.87 Aligned_cols=190 Identities=9% Similarity=-0.046 Sum_probs=109.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeec---CCceEEEEEecCCCeEEEEe--CCCC-------
Q 020784 84 PPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFER---GGGIGVVEMLFRCNILALVG--GGPD------- 150 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~---~~~v~~v~~~~~~~~~~~~s--g~~~------- 150 (321)
+...+..++|+++|+++++... .+|.+|+.+ ++......... ...+..+.+.+++++.++-. |...
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccc
Confidence 3457899999999998777655 568888875 43221111100 11234567777777555311 1000
Q ss_pred -CCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCC--eEEEEEC-------CEEEEEEcCCcEEE--EEEeccCCCCc
Q 020784 151 -PQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLE-------QKIFVYNFADLKLL--HQIETIANPKG 218 (321)
Q Consensus 151 -~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~-------~~I~iwd~~~~~~~--~~l~~~~~~~~ 218 (321)
.....+.|..||.++++..... ....+..++|+++ .++++.. +.|.+|++....+. ..+... ....
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-~~~~ 240 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-PDGL 240 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-SSSC
T ss_pred ccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-CCCC
Confidence 0001256888888777654333 2235677899876 3666533 58999998654421 122111 1111
Q ss_pred eEEEeeCCCceEEEeecCCCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCC
Q 020784 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG 280 (321)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dg 280 (321)
.-.+..+.++.+.+ +..+ .|.+|+...+.+..+..+. .+.+++|+++++.|..++.++
T Consensus 241 pdgi~~d~~G~lwv--~~~~-gv~~~~~~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 241 PDGFCVDRGGWLWS--SSGT-GVCVFDSDGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp CCSEEECTTSCEEE--CCSS-EEEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred CCeEEECCCCCEEE--ecCC-cEEEECCCCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 12234455667665 3444 4888887666566666555 599999999998777776554
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.43 E-value=0.00012 Score=66.22 Aligned_cols=183 Identities=8% Similarity=0.040 Sum_probs=112.6
Q ss_pred CCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeC
Q 020784 97 HGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR 175 (321)
Q Consensus 97 g~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~ 175 (321)
+..+..++. +.+..+|.++++....... ...+...-.. ....+.+.+ .++.|..+|.++|+.+......
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~--~~~~~~~p~~-~~~~v~v~~-------~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKV--AGEALSRPVV-SDGLVLIHT-------SNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--SSCCCSCCEE-ETTEEEEEC-------TTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeC--CCceEcCCEE-ECCEEEEEc-------CCCeEEEEECCCCcEEEEEeCC
Confidence 334445554 5688999999988776654 2222111111 234455544 4688999999999988777664
Q ss_pred Cce------eEEEEeCCeEEEEE-CCEEEEEEcCCcEEEEEEeccCCC----------C-ceEEEeeCCCceEEEeecCC
Q 020784 176 SEV------RSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANP----------K-GLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 176 ~~v------~~v~~~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~~~~----------~-~~~~~s~~~d~~~la~sGs~ 237 (321)
..+ .......+.++++. ++.|..+|..+++.+.++...... + ....+. ++.+++ ++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~v~~--~~~ 247 (376)
T 3q7m_A 173 MPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV---NGVVFA--LAY 247 (376)
T ss_dssp C-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE---TTEEEE--ECT
T ss_pred CCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE---CCEEEE--Eec
Confidence 433 22334456666665 469999999999988777643210 0 111111 234444 567
Q ss_pred CCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 238 KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 238 dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
+|.+..+|..++...-.. .......+... +..|..++.++. |..+|..+|+.+.+..
T Consensus 248 ~g~l~~~d~~tG~~~w~~-~~~~~~~~~~~--~~~l~~~~~~g~-l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 248 NGNLTALDLRSGQIMWKR-ELGSVNDFIVD--GNRIYLVDQNDR-VMALTIDGGVTLWTQS 304 (376)
T ss_dssp TSCEEEEETTTCCEEEEE-CCCCEEEEEEE--TTEEEEEETTCC-EEEEETTTCCEEEEEC
T ss_pred CcEEEEEECCCCcEEeec-cCCCCCCceEE--CCEEEEEcCCCe-EEEEECCCCcEEEeec
Confidence 888988888766544211 12334445443 556666778999 9999999999887765
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.37 E-value=3.6e-05 Score=67.90 Aligned_cols=184 Identities=10% Similarity=-0.034 Sum_probs=114.7
Q ss_pred CCCEEEEEc-CCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEee
Q 020784 96 DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (321)
Q Consensus 96 dg~~lasg~-~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (321)
+|. |..|+ ++++..+|.+ ++....... +...+..+....++. +.+++ .++.|..+|.+ ++.+..+..
T Consensus 107 ~~~-l~v~t~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~-l~vgt-------~~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 107 EDI-LYVTSMDGHLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGT-IYVGS-------NDNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp TTE-EEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSC-EEEEC-------TTSEEEEECTT-SCEEEEEEC
T ss_pred CCE-EEEEecCCEEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCE-EEEEc-------CCCEEEEECCC-CCEeEEEec
Confidence 555 44555 5678888877 655544443 122233333333444 44444 35889999998 777666665
Q ss_pred CC-ceeEEEEe-CCeEEEEECCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceE
Q 020784 175 RS-EVRSVKLR-RDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK 252 (321)
Q Consensus 175 ~~-~v~~v~~~-~~~~~~~~~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~ 252 (321)
.. .+.++... ...+.+++ +.|..|| .+++.+..+......+....+ +.++.+.+ |+.+|.+..++...+.+.
T Consensus 175 ~~~~~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~--~~~g~l~v--~t~~~gl~~~~~~g~~~~ 248 (330)
T 3hxj_A 175 NDAITSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAI--SEDGTIYV--TSLDGHLYAINPDGTEKW 248 (330)
T ss_dssp SSCCCSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEE--CTTSCEEE--EETTTEEEEECTTSCEEE
T ss_pred CCCceeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEE--CCCCeEEE--EcCCCeEEEECCCCCEeE
Confidence 43 45556664 45577777 9999999 777776666654433333343 44556655 456667776775445555
Q ss_pred EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 253 FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 253 ~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
.+......+.++.+.++|.+. .++.+|. |..+|. +|+.+..+..+
T Consensus 249 ~~~~~~~~~~~~~~~~~g~l~-v~t~~gg-l~~~d~-~g~~~~~~~~~ 293 (330)
T 3hxj_A 249 RFKTGKRIESSPVIGNTDTIY-FGSYDGH-LYAINP-DGTEKWNFETG 293 (330)
T ss_dssp EEECSSCCCSCCEECTTSCEE-EECTTCE-EEEECT-TSCEEEEEECS
T ss_pred EeeCCCCccccceEcCCCeEE-EecCCCC-EEEECC-CCcEEEEEEcC
Confidence 555555556677777777654 5777888 889995 78888777644
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.36 E-value=0.00014 Score=67.54 Aligned_cols=174 Identities=11% Similarity=0.097 Sum_probs=110.0
Q ss_pred cCCCeEEEEeCCCCCCCCCCcEEEEeCCCC----cEEEEEe---e----C-CceeEEEEeCCeEEEEE--C------CEE
Q 020784 137 FRCNILALVGGGPDPQYPLNKVMIWDDHQS----RCIGELS---F----R-SEVRSVKLRRDRIIVVL--E------QKI 196 (321)
Q Consensus 137 ~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~----~~~~~~~---~----~-~~v~~v~~~~~~~~~~~--~------~~I 196 (321)
.+.+.+.+.+. .+++|.|+|+.+. +.+..++ . . .....+.+.+++++++. + +.|
T Consensus 93 ~~r~~l~v~~l------~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGL------RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBT------TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccC------CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeE
Confidence 34555655553 3589999999755 5666663 1 1 24556777788766642 2 589
Q ss_pred EEEEcCCcEEEEEEeccCCCC-ce--EEEeeCCCceEEEeec------------------CCCCcEEEEeeCCcce-EEe
Q 020784 197 FVYNFADLKLLHQIETIANPK-GL--CAVSQGVGSLVLVCPG------------------LQKGQVRVEHYASKRT-KFI 254 (321)
Q Consensus 197 ~iwd~~~~~~~~~l~~~~~~~-~~--~~~s~~~d~~~la~sG------------------s~dg~V~i~d~~~~~~-~~l 254 (321)
.++|..+++.+.++.....+. .. +.+++ +++.++++. ..+..|.+||+.++.+ .++
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p--~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI 244 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNL--PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSL 244 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEET--TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECC--CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEE
Confidence 999999999999887543332 12 34455 446666532 2367999999987653 344
Q ss_pred ec--cccceeEEEE--CCCCCEEEEEeC------CCcEEEEEEcCCCcEE--EEE--eC-----------------CCcc
Q 020784 255 MA--HDSRIACFAL--TQDGQLLATSST------KGTLVRIFNTLDGTLL--QEE--CC-----------------PSIS 303 (321)
Q Consensus 255 ~~--H~~~V~~vaf--spdg~~las~S~------Dgt~IrIWd~~tg~~i--~~~--~~-----------------g~~~ 303 (321)
.. .....+.|.| +|+|+++..+++ +++ |-+|....|+.- +.+ .. +...
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~-V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSS-IWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEE-EEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCce-EEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 43 2234666766 999998777765 445 877776655421 111 11 2335
Q ss_pred eeEEEeecCceEEEee
Q 020784 304 AQSGLWLSSAWLRVLR 319 (321)
Q Consensus 304 ~~~~~s~d~~~la~~~ 319 (321)
+.+.+|+||+||.|+-
T Consensus 324 a~I~lS~DGrfLYVSn 339 (462)
T 2ece_A 324 TDIDISLDDKFLYLSL 339 (462)
T ss_dssp CCEEECTTSCEEEEEE
T ss_pred eEEEECCCCCEEEEEe
Confidence 6678999999998863
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.33 E-value=1.7e-05 Score=71.30 Aligned_cols=196 Identities=12% Similarity=0.065 Sum_probs=113.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEc------CCcEEEEEecCCceeEEeeee-----cCCceEEEEEecCCCeEEEEeCCCCCC
Q 020784 84 PPPTLLHISFNQDHGCFAAGT------DHGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLFRCNILALVGGGPDPQ 152 (321)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasg~------~~gv~vw~~~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~~~~sg~~~~~ 152 (321)
+-..+..++|+++|+++++.. ...+.+||..+++.+....+. +......+.+.++...+.++..+..
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~-- 142 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD-- 142 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--
Confidence 345799999999998777653 356889999888765554431 1123456666655445544432100
Q ss_pred CCCCcEEEEeCCCCcEEEEEeeC------------------------------CceeEEEEeCCe--EEEEEC--CEEEE
Q 020784 153 YPLNKVMIWDDHQSRCIGELSFR------------------------------SEVRSVKLRRDR--IIVVLE--QKIFV 198 (321)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~~~------------------------------~~v~~v~~~~~~--~~~~~~--~~I~i 198 (321)
.++.|.+||..+++....+..+ ..+..++++++. ++++.. ..|..
T Consensus 143 -~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~ 221 (343)
T 2qe8_A 143 -DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYR 221 (343)
T ss_dssp -GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred -CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence 2478999999888766544220 124557777653 444432 24444
Q ss_pred EEcC---CcE-----E---EEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceEEeec--cccceeEEE
Q 020784 199 YNFA---DLK-----L---LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA--HDSRIACFA 265 (321)
Q Consensus 199 wd~~---~~~-----~---~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~--H~~~V~~va 265 (321)
++.. .+. . +..+ ++.....-+++ ++++.+++ +...++.|.+|+...+.+..+.. +-..+.+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~--d~~G~l~v-a~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va 297 (343)
T 2qe8_A 222 IKSADLSNLQLTDAELGSKIERY-SEKPICDGISI--DKDHNIYV-GDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFN 297 (343)
T ss_dssp EEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEE--CTTCCEEE-EEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEE
T ss_pred EEHHHhcCCCCChhhhhcceEec-ccCCCCceEEE--CCCCCEEE-EccCCCeEEEEECCCCCEEEEEECCceecCCeeE
Confidence 4421 110 0 0111 11111112344 44556666 36777899999984444443332 345689999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEE
Q 020784 266 LTQDGQLLATSSTKGTLVRIFN 287 (321)
Q Consensus 266 fspdg~~las~S~Dgt~IrIWd 287 (321)
|.++|+++++.+..+. +.+|+
T Consensus 298 ~~~~g~l~v~~~~~~~-~~~f~ 318 (343)
T 2qe8_A 298 FGSDGYLYFDCNQLHH-SAPLN 318 (343)
T ss_dssp ECTTSCEEEEECCGGG-SGGGB
T ss_pred ECCCCcEEEEeCcccc-ccccc
Confidence 9999999988876655 54444
No 243
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.21 E-value=1.3e-07 Score=86.59 Aligned_cols=143 Identities=11% Similarity=0.014 Sum_probs=75.5
Q ss_pred CCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeC-CeEEEE--ECCEEEEEEcCCcEEEEEEeccC
Q 020784 138 RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DRIIVV--LEQKIFVYNFADLKLLHQIETIA 214 (321)
Q Consensus 138 ~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~--~~~~I~iwd~~~~~~~~~l~~~~ 214 (321)
++..+++.+ .|+.|..||..+|+.+..+.. ..+.+..+.. +.++++ .++.|+.||..+++.+.++..+.
T Consensus 8 ~~~~v~~gs-------~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVST-------LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp CTTEEEEEE-------TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred eCCEEEEEc-------CCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 355666666 579999999999999888776 4444433333 334444 35799999998887766654321
Q ss_pred CC-C-ceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceE-EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCC
Q 020784 215 NP-K-GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 215 ~~-~-~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~-~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg 291 (321)
.. . ....+. .+ ..++ .|+.+|.|+.||..++... .+..+. .+.++|++..+++++.|++ |+.||.++|
T Consensus 80 ~~~~~~sp~~~--~~-~~v~-~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~-v~a~d~~tG 150 (369)
T 2hz6_A 80 PELVQASPCRS--SD-GILY-MGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYT-ITMYDTKTR 150 (369)
T ss_dssp HHHHTTCSCC--------CC-CCEEEEEEEEECCC--------------------------EEEEEEEEE-EECCCSSSS
T ss_pred ccccccCceEe--cC-CEEE-EEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCE-EEEEECCCC
Confidence 10 0 011111 12 2343 4888999999998876643 444443 2456678888999999999 999999999
Q ss_pred cEEEEE
Q 020784 292 TLLQEE 297 (321)
Q Consensus 292 ~~i~~~ 297 (321)
+++.++
T Consensus 151 ~~~W~~ 156 (369)
T 2hz6_A 151 ELRWNA 156 (369)
T ss_dssp SCCCEE
T ss_pred CEEEeE
Confidence 876554
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.16 E-value=0.00012 Score=72.28 Aligned_cols=191 Identities=8% Similarity=0.061 Sum_probs=116.7
Q ss_pred CCCEEEEEcCCcEEEEEecCCceeEEeeeecCCc----------e-EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGG----------I-GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 96 dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~----------v-~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
+|..++++.++.+.-+|..+++.+...... ... + ..+.+ ....+.+.+ .|+.|..+|.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~-------~dg~l~alD~~ 146 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQ-IDRSTGFKGCCDVVNRGVAL--WKGKVYVGA-------WDGRLIALDAA 146 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCC-CCGGGGGGSSSCSCCCCCEE--ETTEEEEEC-------TTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCC-CCccccccccccCCCCCceE--ECCEEEEEc-------CCCEEEEEECC
Confidence 444444444455777888888887666541 100 0 11111 344555554 46899999999
Q ss_pred CCcEEEEEeeC------Ccee-EEEEeCCeEEEEE-------CCEEEEEEcCCcEEEEEEeccCCCC-------------
Q 020784 165 QSRCIGELSFR------SEVR-SVKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIANPK------------- 217 (321)
Q Consensus 165 ~~~~~~~~~~~------~~v~-~v~~~~~~~~~~~-------~~~I~iwd~~~~~~~~~l~~~~~~~------------- 217 (321)
+|+.+-.+... ..+. ...+..+.++++. ++.|+.||..+++++.++.......
T Consensus 147 tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~ 226 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAA 226 (677)
T ss_dssp TCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHH
T ss_pred CCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccc
Confidence 99998887754 1222 2223456666654 4789999999999998886532210
Q ss_pred -------------------ceEEEeeCCCceEEEeecCCCC-------------------cEEEEeeCCcceE-Eee--c
Q 020784 218 -------------------GLCAVSQGVGSLVLVCPGLQKG-------------------QVRVEHYASKRTK-FIM--A 256 (321)
Q Consensus 218 -------------------~~~~~s~~~d~~~la~sGs~dg-------------------~V~i~d~~~~~~~-~l~--~ 256 (321)
...++.+. +.++.+ +..++ .|..+|..++.+. .++ .
T Consensus 227 ~~w~~~g~~~~~~~g~~~w~~~~~d~~--~~~vy~-~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~ 303 (677)
T 1kb0_A 227 RTWDPSGKWWEAGGGGTMWDSMTFDAE--LNTMYV-GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETP 303 (677)
T ss_dssp TTSCGGGCHHHHCEECCCCSCEEEETT--TTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST
T ss_pred ccccccCceeEeCCCcccccceeEcCC--CCEEEE-ECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCC
Confidence 12344433 333332 44333 3666888777654 333 2
Q ss_pred cc-------cceeEEEECCCC---CEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 257 HD-------SRIACFALTQDG---QLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 257 H~-------~~V~~vafspdg---~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
|. .....+....+| ..|+.++.+|. |.++|..+|+++..++.+
T Consensus 304 ~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~-l~~lD~~tG~~l~~~~~~ 356 (677)
T 1kb0_A 304 GDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGF-FFVLDRTNGKFISAKNFV 356 (677)
T ss_dssp TCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEESS
T ss_pred CcccccccCCCcEEEecccCCcEeeEEEEECCCCE-EEEEECCCCCEecccccc
Confidence 32 223333444577 68899999999 999999999999877643
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.14 E-value=0.00015 Score=63.79 Aligned_cols=184 Identities=13% Similarity=0.076 Sum_probs=113.6
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCC
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~ 166 (321)
.+.++.+.++|.+++...++++..||.+ ++....... ....+..+....++. +.+ + . +.|..+| .++
T Consensus 138 ~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~d~~g~-l~v-~-------t-~~l~~~d-~~g 204 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAASIGKDGT-IYF-G-------S-DKVYAIN-PDG 204 (330)
T ss_dssp CCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTCC-EEE-E-------S-SSEEEEC-TTS
T ss_pred eeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEec-CCCceeeeEEcCCCE-EEE-E-------e-CEEEEEC-CCC
Confidence 4556677778886655445778888887 655544443 122333333333443 323 3 2 5689999 677
Q ss_pred cEEEEEeeC-CceeEEEEeCC-eEEEEEC-CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEE
Q 020784 167 RCIGELSFR-SEVRSVKLRRD-RIIVVLE-QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRV 243 (321)
Q Consensus 167 ~~~~~~~~~-~~v~~v~~~~~-~~~~~~~-~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i 243 (321)
+.+...... ..+.++...++ .+.+++. +.|..+|. +++.+..+...........+ +.++.+.+ |+.+|.|..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~--~~~g~l~v--~t~~ggl~~ 279 (330)
T 3hxj_A 205 TEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVI--GNTDTIYF--GSYDGHLYA 279 (330)
T ss_dssp CEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEE--CTTSCEEE--ECTTCEEEE
T ss_pred cEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceE--cCCCeEEE--ecCCCCEEE
Confidence 766555543 35677777766 6777775 68888884 55666666554332233333 43455554 577777877
Q ss_pred EeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 020784 244 EHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 244 ~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~t 290 (321)
+|...+....+......+.++...++|.+++ ++.+|. +++...+.
T Consensus 280 ~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G~-~~~~~~~~ 324 (330)
T 3hxj_A 280 INPDGTEKWNFETGSWIIATPVIDENGTIYF-GTRNGK-FYALFNLE 324 (330)
T ss_dssp ECTTSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTSC-EEEEEC--
T ss_pred ECCCCcEEEEEEcCCccccceEEcCCCEEEE-EcCCCe-EEEEeccc
Confidence 7754344445555566788899988998766 777998 88776554
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.14 E-value=0.0035 Score=55.03 Aligned_cols=221 Identities=9% Similarity=0.020 Sum_probs=123.3
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
.....++|+++|+++++... +.|..||.+.. ....... .+....+++..++++++.-.+. ....|..+|..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~--~~~p~gia~~~dG~l~vad~~~-----~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV--EGKVSGLAFTSNGDLVATGWNA-----DSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC--SSEEEEEEECTTSCEEEEEECT-----TSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC--CCCceeEEEcCCCcEEEEeccC-----CcceEEEEcCC
Confidence 35778999999997777655 44667765542 2222332 4456677777888754443321 11246677777
Q ss_pred CCcEEEEEeeCC--ceeEEEEeC-CeEEEEE--CCEEEEEEcCCcEE-EEEEecc-------CCCCceEEEeeCCCceEE
Q 020784 165 QSRCIGELSFRS--EVRSVKLRR-DRIIVVL--EQKIFVYNFADLKL-LHQIETI-------ANPKGLCAVSQGVGSLVL 231 (321)
Q Consensus 165 ~~~~~~~~~~~~--~v~~v~~~~-~~~~~~~--~~~I~iwd~~~~~~-~~~l~~~-------~~~~~~~~~s~~~d~~~l 231 (321)
+++......... ....++... ..++++. .+.|.++|...++. +...... ........+++++. .++
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~-~ly 182 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGN-FLY 182 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETT-EEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCC-EEE
Confidence 777543333221 223333333 3344443 36888888765431 2111110 11112334455432 233
Q ss_pred EeecCCCCcEEEEeeCC-cce---EEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEE--EEeCC-Ccce
Q 020784 232 VCPGLQKGQVRVEHYAS-KRT---KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ--EECCP-SISA 304 (321)
Q Consensus 232 a~sGs~dg~V~i~d~~~-~~~---~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~--~~~~g-~~~~ 304 (321)
+ +-...+.|..+++.. +.+ ..+. .......++++++|+++++....+. |.+||.. |+... .+..+ ....
T Consensus 183 v-~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~-V~~~~~~-G~~~~~~~~~~~~~~p~ 258 (306)
T 2p4o_A 183 V-SNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNS-VVRIAPD-RSTTIIAQAEQGVIGST 258 (306)
T ss_dssp E-EETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCC-EEEECTT-CCEEEEECGGGTCTTEE
T ss_pred E-EeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCe-EEEECCC-CCEEEEeecccccCCce
Confidence 3 456677888888753 221 1221 1245788999999998887776778 9999975 77633 23322 2334
Q ss_pred eEEEe---ecCceEEEee
Q 020784 305 QSGLW---LSSAWLRVLR 319 (321)
Q Consensus 305 ~~~~s---~d~~~la~~~ 319 (321)
.++|. +|+.+|.++.
T Consensus 259 ~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 259 AVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEEECCSTTTTTEEEEEE
T ss_pred EEEEecccCCCCEEEEEC
Confidence 45665 6778877754
No 247
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.13 E-value=0.0038 Score=55.43 Aligned_cols=118 Identities=11% Similarity=0.153 Sum_probs=86.6
Q ss_pred CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEE-e
Q 020784 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKL-R 184 (321)
Q Consensus 106 ~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~-~ 184 (321)
..|.|.|+.......++.. ...- .-++|..+.+|+-.| +++.|+|+++++.+..+.+...|.-..| +
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi--~Ads--AIMnP~~~ViALrag--------~~LQiFnletK~klks~~~~e~VvfWkWis 116 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI--SADS--AIMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 116 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC--CCSE--EEECSSSSEEEEEET--------TEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred CEEEEEECCCCCCcccccc--ccce--eeeCCCccEEEEecC--------CeEEEechHHhhhhcceecCCccEEEEecC
Confidence 3578999988766656554 3333 235788888888763 6899999999999999999988888777 4
Q ss_pred CCeEEEEECCEEEEEEcCC-cEEEEEEeccCC--CCceEEEeeCCCceEEEeec
Q 020784 185 RDRIIVVLEQKIFVYNFAD-LKLLHQIETIAN--PKGLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 185 ~~~~~~~~~~~I~iwd~~~-~~~~~~l~~~~~--~~~~~~~s~~~d~~~la~sG 235 (321)
.+.+.++++..|.-|++.. ...++.|+.|.. ...++.+..+++..+++..|
T Consensus 117 ~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~G 170 (365)
T 2xzh_A 117 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 170 (365)
T ss_dssp SSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEe
Confidence 6778899999999999963 456666766543 34456666677766666544
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.11 E-value=0.0034 Score=53.79 Aligned_cols=209 Identities=5% Similarity=-0.121 Sum_probs=114.3
Q ss_pred CCEEEEEcCCcEEEEEecCCcee-----EEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEE
Q 020784 97 HGCFAAGTDHGFRIYNCDPFREI-----FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE 171 (321)
Q Consensus 97 g~~lasg~~~gv~vw~~~~~~~~-----~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~ 171 (321)
|.+|..+..+.|+.++++..... ..... .......+++.++.+.+.++.. ..+.|.++|...+.....
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~------~~~~I~~~~~~g~~~~~~ 73 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDI------SEPSIGRASLHGGEPTTI 73 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEET------TTTEEEEEESSSCCCEEE
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEEC------CCCEEEEEecCCCCcEEE
Confidence 34555555556777777654321 01110 0123456677776666666653 247899999876554333
Q ss_pred EeeC-CceeEEEEeC--CeEEEEEC--CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCC-CceEEEeecCC--CCcEEE
Q 020784 172 LSFR-SEVRSVKLRR--DRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGV-GSLVLVCPGLQ--KGQVRV 243 (321)
Q Consensus 172 ~~~~-~~v~~v~~~~--~~~~~~~~--~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~-d~~~la~sGs~--dg~V~i 243 (321)
+... ..+..+.+++ ..++++.. +.|.++++..... ..+.... ......+..++ ++.+.++ ... .+.|..
T Consensus 74 ~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~-~~~P~~i~vd~~~g~lyv~-~~~~~~~~I~~ 150 (267)
T 1npe_A 74 IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTG-LVNPRGIVTDPVRGNLYWT-DWNRDNPKIET 150 (267)
T ss_dssp ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSS-CSSEEEEEEETTTTEEEEE-ECCSSSCEEEE
T ss_pred EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECC-CCCccEEEEeeCCCEEEEE-ECCCCCcEEEE
Confidence 3222 3678888875 45666643 5899999864322 2222111 11223333444 2344442 322 467777
Q ss_pred EeeCCcceEEee-ccccceeEEEECCCCCEE-EEEeCCCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEEe
Q 020784 244 EHYASKRTKFIM-AHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 244 ~d~~~~~~~~l~-~H~~~V~~vafspdg~~l-as~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~~ 318 (321)
.+........+. ..-...+.+++++++.+| ++-...+. |.++|+..+.....+..+.... .++.++.+|-++
T Consensus 151 ~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~-I~~~~~~g~~~~~~~~~~~~P~--gi~~d~~~lyva 224 (267)
T 1npe_A 151 SHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-AECLNPAQPGRRKVLEGLQYPF--AVTSYGKNLYYT 224 (267)
T ss_dssp EETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTEEEEEEEEECCCSEE--EEEEETTEEEEE
T ss_pred EecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE-EEEEecCCCceEEEecCCCCce--EEEEeCCEEEEE
Confidence 666544433332 233568999999986654 55555566 9999998655444343322222 344556666554
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.08 E-value=0.0033 Score=62.85 Aligned_cols=194 Identities=11% Similarity=0.131 Sum_probs=123.4
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc
Q 020784 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (321)
Q Consensus 88 V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~ 167 (321)
|.++...++|++.+....+|+..|+..+.+........+...+..+....++. +.+++ .++.|.+||..+++
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt-------~~~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVAT-------EGAGLFLINPKTKE 246 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEE-------BSSCEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEE-------CCCCeEEEeCCCCe
Confidence 88999999998777544578889987665432211110133455555444444 33443 23459999988776
Q ss_pred EEEEEee--------CCceeEEEEeC-CeEEEEECCEEEEEEcCCcEEEEEEeccC------CCCceEEEeeCCCceEEE
Q 020784 168 CIGELSF--------RSEVRSVKLRR-DRIIVVLEQKIFVYNFADLKLLHQIETIA------NPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 168 ~~~~~~~--------~~~v~~v~~~~-~~~~~~~~~~I~iwd~~~~~~~~~l~~~~------~~~~~~~~s~~~d~~~la 232 (321)
....... ...|.++...+ ..+.+++.+.|.+||..+++.. .+.... ....+.++..+.++.+-+
T Consensus 247 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 325 (795)
T 4a2l_A 247 IKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFA-SYSSNPVENGSLSQRSVRSIFMDSQGGMWL 325 (795)
T ss_dssp EEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEEE-EECCCTTSTTSCSSSCEEEEEECTTSCEEE
T ss_pred EEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeEE-EEecCCCCCCCCCCCcEEEEEEeCCcCEEE
Confidence 5432211 13588888764 4688888778999998876643 332211 113466777777777665
Q ss_pred eecCCCCcEEEEeeCCcceEEeec-------cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEE
Q 020784 233 CPGLQKGQVRVEHYASKRTKFIMA-------HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~~~~l~~-------H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i 294 (321)
|+.++-|.+++........+.. ....|.+++..++|.+.+ |..++. |..||..+++..
T Consensus 326 --gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~G-l~~~~~~~~~~~ 390 (795)
T 4a2l_A 326 --GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGG-LNLYNPITQRFT 390 (795)
T ss_dssp --EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSC-EEEECTTTCCEE
T ss_pred --EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCC-eEEEcCCCCcEE
Confidence 6776777777765554443321 245699999999998765 777878 889999887754
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.08 E-value=0.00018 Score=70.85 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=57.5
Q ss_pred CCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcc--eeEEEeecCc-
Q 020784 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSIS--AQSGLWLSSA- 313 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~--~~~~~s~d~~- 313 (321)
.+|.|..||..++++.--..+...+....+...|.++..++.||. +++||.++|+.+.+++.+... .-+.+..+|+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~-l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQ-MHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCccc-chhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence 457788899888775532233344444455556778888999999 999999999999998776442 2335567774
Q ss_pred eEEEee
Q 020784 314 WLRVLR 319 (321)
Q Consensus 314 ~la~~~ 319 (321)
|++++.
T Consensus 515 yva~~~ 520 (668)
T 1kv9_A 515 YVAIMA 520 (668)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777764
No 251
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.08 E-value=0.0047 Score=56.92 Aligned_cols=130 Identities=11% Similarity=0.156 Sum_probs=93.1
Q ss_pred CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEE-e
Q 020784 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKL-R 184 (321)
Q Consensus 106 ~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~-~ 184 (321)
..|.|-|+.......++.. ...- .-++|..+.+|+-.| +++.|+|+++.+.+..+.+...|.-..| +
T Consensus 48 ~~vvIiDl~~~~~~~rrpi--~Ads--AIMnP~~~iiALrag--------~~lQiFnle~K~klks~~~~e~VvfWkWis 115 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI--SADS--AIMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 115 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC--CCSE--EEECSSSSCEEEEET--------TEEEEEETTTTEEEEEEECSSCCCEEEEEE
T ss_pred CeEEEEECCCCCcceeccc--ccce--eeeCCCCcEEEEecC--------CeEEEEchHHhhhhcceecCCCceEEEecC
Confidence 4588999988766655554 2332 346788888888762 7899999999999999999888877776 5
Q ss_pred CCeEEEEECCEEEEEEcCC-cEEEEEEeccCC--CCceEEEeeCCCceEEEeecC------CCCcEEEEeeC
Q 020784 185 RDRIIVVLEQKIFVYNFAD-LKLLHQIETIAN--PKGLCAVSQGVGSLVLVCPGL------QKGQVRVEHYA 247 (321)
Q Consensus 185 ~~~~~~~~~~~I~iwd~~~-~~~~~~l~~~~~--~~~~~~~s~~~d~~~la~sGs------~dg~V~i~d~~ 247 (321)
.+.+.++++..|+-|++.. ...++.|+.|.. ...++.+..+++..+++..|- ..|.+.++...
T Consensus 116 ~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e 187 (494)
T 1bpo_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (494)
T ss_dssp TTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST
T ss_pred CCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc
Confidence 6788999999999999963 456667766543 344667777777777765443 23445555543
No 252
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.05 E-value=0.00037 Score=68.91 Aligned_cols=190 Identities=14% Similarity=0.140 Sum_probs=113.1
Q ss_pred CCCEEEEEcCCcEEEEEecCCceeEEeeeecCCc----------e-EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGG----------I-GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 96 dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~----------v-~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
+|..++++.+..+.-+|..+++++...... ... + ..+. .....+++.+ .|+.|..+|.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~--~~~g~v~v~~-------~dg~l~AlDa~ 139 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQ-SDRHRAGEACCDAVNRGVA--VWKGKVYVGV-------LDGRLEAIDAK 139 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCC-CCGGGGGGCTTCSCCCCCE--EETTEEEEEC-------TTSEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCC-CCccccccccccCCCCccE--EECCEEEEEc-------cCCEEEEEECC
Confidence 444444444455778899999887766531 110 0 0011 1244555554 47999999999
Q ss_pred CCcEEEEEeeC------Ccee-EEEEeCCeEEEEE-------CCEEEEEEcCCcEEEEEEeccC-CCC------------
Q 020784 165 QSRCIGELSFR------SEVR-SVKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIA-NPK------------ 217 (321)
Q Consensus 165 ~~~~~~~~~~~------~~v~-~v~~~~~~~~~~~-------~~~I~iwd~~~~~~~~~l~~~~-~~~------------ 217 (321)
+|+.+-.+... ..+. +-.+..+.+++.. ++.|+.||..+++++.++.... .+.
T Consensus 140 TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~ 219 (689)
T 1yiq_A 140 TGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAA 219 (689)
T ss_dssp TCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHH
T ss_pred CCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccc
Confidence 99988776653 1111 1123345555543 3689999999999988886421 100
Q ss_pred ------------------ceEEEeeCCCceEEEeecCCCCc-------------------EEEEeeCCcceE-Eeec--c
Q 020784 218 ------------------GLCAVSQGVGSLVLVCPGLQKGQ-------------------VRVEHYASKRTK-FIMA--H 257 (321)
Q Consensus 218 ------------------~~~~~s~~~d~~~la~sGs~dg~-------------------V~i~d~~~~~~~-~l~~--H 257 (321)
...++.+ +..++.+ +..++. |..+|..++.+. .++. |
T Consensus 220 ~~~~g~~w~~~~~g~~~w~~~~~d~--~~~~vy~-~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~ 296 (689)
T 1yiq_A 220 KTWFGDAYVEQGGGGTAWDSFAYDP--ELNLLYI-GVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPG 296 (689)
T ss_dssp TTCCSSTHHHHCEECCCCSCEEEET--TTTEEEE-ECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTT
T ss_pred cccCCceeeecCCCCccccceeEcC--CCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCc
Confidence 1233433 3344443 555543 666888877754 3332 3
Q ss_pred c-------cceeEEEECCCCC---EEEEEeCCCcEEEEEEcCCCcEEEEEeC
Q 020784 258 D-------SRIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 258 ~-------~~V~~vafspdg~---~las~S~Dgt~IrIWd~~tg~~i~~~~~ 299 (321)
. ..+....+..+|+ .++.++.+|. ++++|.++|+++...+.
T Consensus 297 d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~~ 347 (689)
T 1yiq_A 297 DAWDYTATQHMILAELPIDGKPRKVLMQAPKNGF-FYVIDRATGELLSAKGI 347 (689)
T ss_dssp CCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEES
T ss_pred ccccccCCCCcEEEeeccCCcEEEEEEEECCCCe-EEEEECCCCCEeccccc
Confidence 2 1222222223565 7888999999 99999999999865543
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.05 E-value=0.0047 Score=54.52 Aligned_cols=198 Identities=11% Similarity=0.086 Sum_probs=110.3
Q ss_pred EEEEEcCCCCEEEEEcC-CcEEEEEecCCceeEEeeeec-------------------CCceEEEEEecCCCeEEEEeCC
Q 020784 89 LHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFER-------------------GGGIGVVEMLFRCNILALVGGG 148 (321)
Q Consensus 89 ~~v~fs~dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~-------------------~~~v~~v~~~~~~~~~~~~sg~ 148 (321)
.+++|+++|+++.++.. ++|..|+.+..+... ..... .+....+.+..+...+.++..
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~- 99 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC- 99 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET-
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC-
Confidence 45889999986666655 557777766543321 11000 123455666652334555542
Q ss_pred CCCCCCCCcEEEEeCCCCcEEEEEe-eC----CceeEEEEeC-C-eEEEEEC-------------------CEEEEEEcC
Q 020784 149 PDPQYPLNKVMIWDDHQSRCIGELS-FR----SEVRSVKLRR-D-RIIVVLE-------------------QKIFVYNFA 202 (321)
Q Consensus 149 ~~~~~~d~~v~iWD~~~~~~~~~~~-~~----~~v~~v~~~~-~-~~~~~~~-------------------~~I~iwd~~ 202 (321)
.+.|..+|..++....... .. ..+..+.+.+ + .++++.. +.|..||..
T Consensus 100 ------~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 100 ------YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp ------TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred ------CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 2458888877654221111 11 2356788877 5 4555531 468888877
Q ss_pred CcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCc---ceEEeeccccceeEEEECCCCCEEEEEeC-
Q 020784 203 DLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQDGQLLATSST- 278 (321)
Q Consensus 203 ~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~---~~~~l~~H~~~V~~vafspdg~~las~S~- 278 (321)
+++..........+. -++++ +++..|.++-..++.|.+++.... ....+....+ ...+++.++|.+.++...
T Consensus 174 ~~~~~~~~~~~~~p~-gia~~--~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 174 TKETTLLLKELHVPG-GAEVS--ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp TTEEEEEEEEESCCC-EEEEC--TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEeccCCccCc-ceEEC--CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCc
Confidence 665433222222222 23444 454533333455678888777642 2222222223 888999999998777654
Q ss_pred ---------CCcEEEEEEcCCCcEEEEEeCC
Q 020784 279 ---------KGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 279 ---------Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
.+. |.++|- .|+.+..+...
T Consensus 250 ~~~~~~~~~~~~-v~~~d~-~G~~~~~~~~~ 278 (322)
T 2fp8_A 250 LDGNMHGRVDPK-GIKFDE-FGNILEVIPLP 278 (322)
T ss_dssp TTSSTTSCEEEE-EEEECT-TSCEEEEEECC
T ss_pred ccccccCCCccE-EEEECC-CCCEEEEEECC
Confidence 345 777775 58888877543
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.97 E-value=0.002 Score=62.11 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=52.1
Q ss_pred CCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCccee--EEEeecCc-
Q 020784 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISAQ--SGLWLSSA- 313 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~~--~~~s~d~~- 313 (321)
.+|.|..+|..++.+.--..+...+....+...+.++..++.||. |+.||.++|+++.+++.+..... +.+..+|+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~-l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGY-LKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSE-EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCe-EEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 357788888877665422223333444333434556666899999 99999999999999987654322 34457775
Q ss_pred eEEE
Q 020784 314 WLRV 317 (321)
Q Consensus 314 ~la~ 317 (321)
|+++
T Consensus 521 yv~~ 524 (571)
T 2ad6_A 521 YIGS 524 (571)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4544
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.94 E-value=0.0076 Score=60.22 Aligned_cols=197 Identities=12% Similarity=0.087 Sum_probs=123.1
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeee-------cCCceEEEEEecCCCeEEEEeCCCCCCCCCCc
Q 020784 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-------RGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~-------~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~ 157 (321)
...|.++....+|.+.+...++|+..|+..+.......... ....|..+....+++.+.+++ .++.
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt-------~~~G 428 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT-------HAGG 428 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-------TTTE
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-------CcCc
Confidence 45799999999998776555578999987765433221100 123466666555665355555 3467
Q ss_pred EEEEeCCCCcEEEEEe----e-CCceeEEEEeC-CeEEEEECCEEEEEEcCCcEEEEEEecc-----CCCCceEEEeeCC
Q 020784 158 VMIWDDHQSRCIGELS----F-RSEVRSVKLRR-DRIIVVLEQKIFVYNFADLKLLHQIETI-----ANPKGLCAVSQGV 226 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~----~-~~~v~~v~~~~-~~~~~~~~~~I~iwd~~~~~~~~~l~~~-----~~~~~~~~~s~~~ 226 (321)
|.+||.++++...-.. . ...|.++...+ ..+.+++.+.+.+||..+++... +... .....+.++..+.
T Consensus 429 l~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTT-IEKEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp EEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEE-CCBCTTCCBCCCCCEEEEEECT
T ss_pred eeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEE-ccccccccccCCceEEEEEECC
Confidence 9999998876543221 1 23578887765 46788887889999988765432 2211 1113356666777
Q ss_pred CceEEEeecCCCCcEEEEeeCCcceEEee-------ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 020784 227 GSLVLVCPGLQKGQVRVEHYASKRTKFIM-------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEE 297 (321)
Q Consensus 227 d~~~la~sGs~dg~V~i~d~~~~~~~~l~-------~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~ 297 (321)
++.+.+ |+.+| +..++..++.. .+. .+...|.+|...++|.+.++.. . . |..||..+++. ..+
T Consensus 508 ~g~lWi--gt~~G-l~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-G-l~~~d~~~~~~-~~~ 577 (795)
T 4a2l_A 508 HKRLWI--GGEEG-LSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-G-FYCFNEKDKQI-KRY 577 (795)
T ss_dssp TCCEEE--EESSC-EEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-C-EEEEETTTTEE-EEE
T ss_pred CCCEEE--EeCCc-eEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-C-ceeECCCCCcE-EEe
Confidence 777665 34444 55566554443 322 2356799999999999776543 3 6 77899887654 344
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.83 E-value=0.0077 Score=58.20 Aligned_cols=80 Identities=18% Similarity=0.086 Sum_probs=53.3
Q ss_pred CCcEEEEeeCCcceE-EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce--eEEEeecC-c
Q 020784 238 KGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA--QSGLWLSS-A 313 (321)
Q Consensus 238 dg~V~i~d~~~~~~~-~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~--~~~~s~d~-~ 313 (321)
+|.|.-||..++++. ... +...+..-.+...|.++..|+.||. ++.||.++|+++-+++.+.... -+.+..+| +
T Consensus 465 ~G~l~A~D~~tG~~~W~~~-~~~~~~~g~~~tagglvf~g~~dg~-l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHK-EHLPLWAGVLATAGNLVFTGTGDGY-FKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEE-ESSCCCSCCEEETTTEEEEECTTSE-EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEec-CCCCCcccceEeCCCEEEEECCCCc-EEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 567777888777654 332 2223322222224566777999999 9999999999999998765533 34566788 5
Q ss_pred eEEEee
Q 020784 314 WLRVLR 319 (321)
Q Consensus 314 ~la~~~ 319 (321)
|++++.
T Consensus 543 Yv~~~~ 548 (582)
T 1flg_A 543 YLGVTV 548 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 787753
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.78 E-value=0.0052 Score=59.27 Aligned_cols=152 Identities=6% Similarity=-0.073 Sum_probs=83.8
Q ss_pred CCEEEEEcC-CcEEEEEecCCceeEEeeeec-C--CceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEE
Q 020784 97 HGCFAAGTD-HGFRIYNCDPFREIFRRDFER-G--GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGEL 172 (321)
Q Consensus 97 g~~lasg~~-~gv~vw~~~~~~~~~~~~~~~-~--~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~ 172 (321)
+..+..++. ..+..+|..+++.+....... . ..+...-.. ....+++.+.+.+. -.++.|..+|.++|+.+-.+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEE
Confidence 445556655 447788999998877665410 0 011110001 13344444321100 01589999999999988776
Q ss_pred eeCCce---------------------------------------eEEEEeC--CeEEEEEC-----------------C
Q 020784 173 SFRSEV---------------------------------------RSVKLRR--DRIIVVLE-----------------Q 194 (321)
Q Consensus 173 ~~~~~v---------------------------------------~~v~~~~--~~~~~~~~-----------------~ 194 (321)
...... ..+.+.+ ..+++.+. +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 543211 1133333 35555542 2
Q ss_pred EEEEEEcCCcEEEEEEeccCCC------C-ceEEEeeCCCce---EEEeecCCCCcEEEEeeCCcce
Q 020784 195 KIFVYNFADLKLLHQIETIANP------K-GLCAVSQGVGSL---VLVCPGLQKGQVRVEHYASKRT 251 (321)
Q Consensus 195 ~I~iwd~~~~~~~~~l~~~~~~------~-~~~~~s~~~d~~---~la~sGs~dg~V~i~d~~~~~~ 251 (321)
.|..+|..+++.+..++...+. . ..+.+....++. +++ .++.+|.+.+.|..++.+
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~-~~~~~G~l~~lD~~tG~~ 338 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLS-HIDRNGILYTLNRENGNL 338 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEE-EECTTSEEEEEETTTCCE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEE-EeCCCcEEEEEECCCCCE
Confidence 5999999999998888753211 1 111122112343 344 478889999988777654
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.75 E-value=0.0011 Score=65.36 Aligned_cols=190 Identities=15% Similarity=0.177 Sum_probs=111.6
Q ss_pred CCCEEEEEcCCcEEEEEecCCceeEEeeeecCCc----------e-EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGG----------I-GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 96 dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~----------v-~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
+|..+++..+..+.-+|..+++.+...... ... + ..+.+ ....+++.+ .|+.|..+|.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~-------~dg~l~alD~~ 135 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPE-VAKVKARTSCCDAVNRGVAL--WGDKVYVGT-------LDGRLIALDAK 135 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCC-CCGGGGGGCTTCSCCCCCEE--EBTEEEEEC-------TTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCC-CCccccccccccCCccceEE--ECCEEEEEc-------CCCEEEEEECC
Confidence 444444444455777888888887666531 100 0 01111 234455554 46899999999
Q ss_pred CCcEEEEEeeCC-----cee-EEEEeCCeEEEEE-------CCEEEEEEcCCcEEEEEEeccC-CCC-------------
Q 020784 165 QSRCIGELSFRS-----EVR-SVKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIA-NPK------------- 217 (321)
Q Consensus 165 ~~~~~~~~~~~~-----~v~-~v~~~~~~~~~~~-------~~~I~iwd~~~~~~~~~l~~~~-~~~------------- 217 (321)
+|+.+-.+.... .+. .-.+..+.+++.. ++.|..||..+++++.++.... .+.
T Consensus 136 tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 215 (668)
T 1kv9_A 136 TGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAK 215 (668)
T ss_dssp TCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred CCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccc
Confidence 999887776531 111 1123355565553 3689999999999998886421 110
Q ss_pred -----------------ceEEEeeCCCceEEEeecCCCC-------------------cEEEEeeCCcceE-Eee--ccc
Q 020784 218 -----------------GLCAVSQGVGSLVLVCPGLQKG-------------------QVRVEHYASKRTK-FIM--AHD 258 (321)
Q Consensus 218 -----------------~~~~~s~~~d~~~la~sGs~dg-------------------~V~i~d~~~~~~~-~l~--~H~ 258 (321)
...++. ++..++.+ +..++ .|.-+|..++.+. .++ .|.
T Consensus 216 ~~~g~~~w~~~~gg~~w~~~a~d--~~~~~vy~-~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~ 292 (668)
T 1kv9_A 216 TWQGDQYWKLGGGGTVWDSMAYD--PELDLLYV-GTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGD 292 (668)
T ss_dssp TCCSSCHHHHCEECCCCSCEEEE--TTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC
T ss_pred cCCccceeeeCCCCccccceEEc--CCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCc
Confidence 012333 33233332 55554 3666888777654 333 233
Q ss_pred -------cceeEEEECCCCC---EEEEEeCCCcEEEEEEcCCCcEEEEEeC
Q 020784 259 -------SRIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 259 -------~~V~~vafspdg~---~las~S~Dgt~IrIWd~~tg~~i~~~~~ 299 (321)
.++....+..+|+ .|+.++.+|. +.++|..+|+++...+.
T Consensus 293 ~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~~ 342 (668)
T 1kv9_A 293 SWDFTATQQITLAELNIDGKPRKVLMQAPKNGF-FYVLDRTNGKLISAEKF 342 (668)
T ss_dssp CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEES
T ss_pred cccccCCCCcEEEEeccCCcEEEEEEEECCCCE-EEEEECCCCCEeccccc
Confidence 2233333334665 6888999999 99999999999865543
No 259
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.71 E-value=0.0049 Score=59.15 Aligned_cols=168 Identities=9% Similarity=0.021 Sum_probs=111.6
Q ss_pred CCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeC--CceeEEEEe--C--CeEEEEE-------------------
Q 020784 138 RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR--SEVRSVKLR--R--DRIIVVL------------------- 192 (321)
Q Consensus 138 ~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~--~~v~~v~~~--~--~~~~~~~------------------- 192 (321)
+++.+.+... .++.|.+-|+++.++...++.. ..+..+.+. + +.++++.
T Consensus 100 DG~~lfVnd~------~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 100 DGRFLFMNDK------ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEET------TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCEEEEEcC------CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 6776666542 3578999999999988866543 457777762 3 4555553
Q ss_pred CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC----------------------------------
Q 020784 193 EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK---------------------------------- 238 (321)
Q Consensus 193 ~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d---------------------------------- 238 (321)
++.+.++|..+++.+.++....++. -+++++++ .++.++....
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd-~~~~spdG--k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLD-NCDADYEG--KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCC-CEEECSSS--SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred CceEEEEECCCCeEEEEEEeCCCcc-ceEECCCC--CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 1479999999999999988654544 34556653 4444322221
Q ss_pred ---CcEEEEeeCC--cce--EEeeccccceeEEEECCCCCEEEEEeC-CCcEEEEEEcCCCc------------EEEEEe
Q 020784 239 ---GQVRVEHYAS--KRT--KFIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGT------------LLQEEC 298 (321)
Q Consensus 239 ---g~V~i~d~~~--~~~--~~l~~H~~~V~~vafspdg~~las~S~-Dgt~IrIWd~~tg~------------~i~~~~ 298 (321)
+.|.|.|... +.. ..+. -.....++.|+|||+++..++. +++ |.|+|+.+.+ .+.+..
T Consensus 251 ~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~-VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPT-VTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp EEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSB-EEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred eEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCe-EEEEECcccccccccccCcccceEEEcC
Confidence 1355555544 111 1222 1235688999999997766654 666 9999999763 677888
Q ss_pred CCCcceeEEEeecCceEEE
Q 020784 299 CPSISAQSGLWLSSAWLRV 317 (321)
Q Consensus 299 ~g~~~~~~~~s~d~~~la~ 317 (321)
.|.....+.|+.|| ++-+
T Consensus 329 vG~gP~h~aF~~dG-~aY~ 346 (595)
T 1fwx_A 329 LGLGPLHTAFDGRG-NAYT 346 (595)
T ss_dssp CCSCEEEEEECTTS-EEEE
T ss_pred CCCCcceEEECCCC-eEEE
Confidence 88888888999999 6544
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.69 E-value=0.011 Score=57.36 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=52.6
Q ss_pred CCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCCcce--eEEEeecC-c
Q 020784 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPSISA--QSGLWLSS-A 313 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~~~~--~~~~s~d~-~ 313 (321)
..|.|.-||..++++.--..+..++..-.+.-.|.++..++.||. ++.||.++|+++-+++.+.... -+.+..+| +
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~-l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGY-LKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSE-EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCe-EEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 346777788877765422222222222122224566666899999 9999999999999887655432 34556788 5
Q ss_pred eEEEee
Q 020784 314 WLRVLR 319 (321)
Q Consensus 314 ~la~~~ 319 (321)
|++++.
T Consensus 530 yv~~~~ 535 (599)
T 1w6s_A 530 YVAIYY 535 (599)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 777753
No 261
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.62 E-value=0.026 Score=50.63 Aligned_cols=188 Identities=12% Similarity=0.165 Sum_probs=107.2
Q ss_pred EEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecC----CCe--EEEEeCCCCCCCC--CCcEEEEeC--CCCcEE
Q 020784 100 FAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFR----CNI--LALVGGGPDPQYP--LNKVMIWDD--HQSRCI 169 (321)
Q Consensus 100 lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~----~~~--~~~~sg~~~~~~~--d~~v~iWD~--~~~~~~ 169 (321)
|++--..|+.|||+ .++.+.... .+.+.-|.+.+. +.. ++.++.. . +++|++|++ .++. +
T Consensus 44 i~t~k~~gL~Vydl-~G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R-----~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 44 ITTNKKSGLVVYSL-DGKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNR-----SEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp EEEETTTEEEEEET-TSCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEEC-----STTCCEEEEEEECTTTCC-E
T ss_pred EEEcCCCCEEEEcC-CCcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCC-----CCCCCeEEEEEECCCCCc-e
Confidence 33433467999999 666655543 356666666542 222 4555533 3 488999966 4444 4
Q ss_pred EEEe-------eC-CceeEEEE--eC--Ce-EEEEE--CCEEEEEEc-------CCcEEEEEEeccCCCCceEEEeeCCC
Q 020784 170 GELS-------FR-SEVRSVKL--RR--DR-IIVVL--EQKIFVYNF-------ADLKLLHQIETIANPKGLCAVSQGVG 227 (321)
Q Consensus 170 ~~~~-------~~-~~v~~v~~--~~--~~-~~~~~--~~~I~iwd~-------~~~~~~~~l~~~~~~~~~~~~s~~~d 227 (321)
..+. .. ..++.+|+ .+ .. .+.+. ++.+..|++ .+.+++++|....++. -|.+... .
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E-gcvvDd~-~ 191 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTE-GMAADDE-Y 191 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEE-EEEEETT-T
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcc-eEEEcCC-C
Confidence 4441 11 46777887 43 22 23333 368888888 2457788888765433 3444322 3
Q ss_pred ceEEEeecCCCCcEEEEeeC-----CcceE-Eee-cc-ccceeEEEE--CCCCC-EEEEEe-CCCcEEEEEEcC-CCcEE
Q 020784 228 SLVLVCPGLQKGQVRVEHYA-----SKRTK-FIM-AH-DSRIACFAL--TQDGQ-LLATSS-TKGTLVRIFNTL-DGTLL 294 (321)
Q Consensus 228 ~~~la~sGs~dg~V~i~d~~-----~~~~~-~l~-~H-~~~V~~vaf--spdg~-~las~S-~Dgt~IrIWd~~-tg~~i 294 (321)
+.+++ +..+.-|..++.. ...+. .+. +| ...+..|++ .++|+ +|+..| .+++ ..|||.+ +.+.+
T Consensus 192 g~Lyv--~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s-~~Vydr~~~~~~v 268 (355)
T 3amr_A 192 GRLYI--AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS-YAIYDRQGKNKYV 268 (355)
T ss_dssp TEEEE--EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE-EEEEESSTTCCEE
T ss_pred CeEEE--ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE-EEEEECCCCCcEE
Confidence 34444 5665333333422 11222 221 22 347888988 45555 444444 4667 9999997 88899
Q ss_pred EEEeCCCc
Q 020784 295 QEECCPSI 302 (321)
Q Consensus 295 ~~~~~g~~ 302 (321)
..|+.+..
T Consensus 269 g~f~Ig~~ 276 (355)
T 3amr_A 269 ADFRITDG 276 (355)
T ss_dssp EEEEECCC
T ss_pred EEEEecCC
Confidence 99875544
No 262
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.58 E-value=0.005 Score=61.32 Aligned_cols=194 Identities=10% Similarity=0.020 Sum_probs=101.4
Q ss_pred CeEEEEEc-CCCCEEEEEcC-C-----cEEEEEecCC-ceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcE
Q 020784 87 TLLHISFN-QDHGCFAAGTD-H-----GFRIYNCDPF-REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (321)
Q Consensus 87 ~V~~v~fs-~dg~~lasg~~-~-----gv~vw~~~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v 158 (321)
.+...+|| |||++||-+.+ . .++++|++++ +.+.. .+ ......+.|+++++.++.+..... -....|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~--~~~~~~~~WspDg~~l~y~~~d~~--~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KV--SGTNGEIVWGPDHTSLFYVTKDET--LRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CE--EEECSCCEECSSTTEEEEEEECTT--CCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cc--cCceeeEEEecCCCEEEEEEECCC--CCCCEE
Confidence 57889999 99999985543 2 2778898887 52211 11 111234578889888877763210 012468
Q ss_pred EEEeCCCCcE--EEEEee--CCceeEEEEeCCe--EEEEE-C---CEEEEEEcCCc--EE-EEEEeccCCCCceEEEeeC
Q 020784 159 MIWDDHQSRC--IGELSF--RSEVRSVKLRRDR--IIVVL-E---QKIFVYNFADL--KL-LHQIETIANPKGLCAVSQG 225 (321)
Q Consensus 159 ~iWD~~~~~~--~~~~~~--~~~v~~v~~~~~~--~~~~~-~---~~I~iwd~~~~--~~-~~~l~~~~~~~~~~~~s~~ 225 (321)
.++++.+++. ...+.. ......+.|+++. +++.. . ..|.++|+.++ +. ++.+.... ........+.
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~s~~~~ 328 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE-KGVRYDVQMH 328 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC-TTCCEEEEEE
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC-CCceEEEeee
Confidence 8889877641 222222 2234567788764 44433 2 37888998764 22 12332211 1112222211
Q ss_pred CCceEEEeecCCC--C--cEEEEeeCC-cceEE-eecccc--ceeEEEECCCCCEEEEEeCCCc-EEEEEEc
Q 020784 226 VGSLVLVCPGLQK--G--QVRVEHYAS-KRTKF-IMAHDS--RIACFALTQDGQLLATSSTKGT-LVRIFNT 288 (321)
Q Consensus 226 ~d~~~la~sGs~d--g--~V~i~d~~~-~~~~~-l~~H~~--~V~~vafspdg~~las~S~Dgt-~IrIWd~ 288 (321)
.++.+++. ...+ + .|..++... +.... +..|.. .+..+++. .+.++++...|+. .|.++|+
T Consensus 329 ~g~~l~~~-t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 329 GTSHLVIL-TNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TTTEEEEE-ECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eCCEEEEE-eCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 22334433 3333 3 444466543 23233 444444 35566665 3456667777775 2444564
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.56 E-value=0.029 Score=49.27 Aligned_cols=199 Identities=11% Similarity=-0.001 Sum_probs=107.6
Q ss_pred CeEEEEEcC-CCCEEEEEcCCcEEEEEecCCceeEEe-eee--cCCceEEEEEec-CCCeEEEEeCCCCC----------
Q 020784 87 TLLHISFNQ-DHGCFAAGTDHGFRIYNCDPFREIFRR-DFE--RGGGIGVVEMLF-RCNILALVGGGPDP---------- 151 (321)
Q Consensus 87 ~V~~v~fs~-dg~~lasg~~~gv~vw~~~~~~~~~~~-~~~--~~~~v~~v~~~~-~~~~~~~~sg~~~~---------- 151 (321)
....+++.+ +|+++++....++..+|.++....... ... .......+.+.+ ++++.+.-.+....
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 578999997 787766656677777776544321111 110 012245567777 67655443321000
Q ss_pred CCCCCcEEEEeCCCCcEEEEEeeCCceeEEEEeCC--eEEEEE--CCEEEEEEcCCcE--EEEEEeccCCCCceEEEeeC
Q 020784 152 QYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQG 225 (321)
Q Consensus 152 ~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~--~~~I~iwd~~~~~--~~~~l~~~~~~~~~~~~s~~ 225 (321)
....+.|..||..+++.......-.....++++++ .++++. .+.|..|++.... ....+..... .-.+..+
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d 237 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRN 237 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS---EEEEEEC
T ss_pred cCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC---CCCeEEC
Confidence 00236788899877765433222234567888876 466664 3699999986421 1112221111 2334455
Q ss_pred CCceEEEeecC---------CCCcEEEEeeCCcceEEeecc----ccceeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 020784 226 VGSLVLVCPGL---------QKGQVRVEHYASKRTKFIMAH----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 226 ~d~~~la~sGs---------~dg~V~i~d~~~~~~~~l~~H----~~~V~~vafspdg~~las~S~Dgt~IrIWd~~t 290 (321)
+++.+.++... ..+.|..++...+.+..+... -..++++++ .+|+++++....+. |.++++..
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~-i~~~~~~~ 313 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGS-VGILVYDK 313 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSE-EEEEEC--
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCc-eEEEeccc
Confidence 56665553211 134566666554444444433 245777877 46777776666666 88888753
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.51 E-value=0.013 Score=57.31 Aligned_cols=201 Identities=10% Similarity=0.040 Sum_probs=103.8
Q ss_pred EEEEEcCCCCEEEEEcC--CcEEEEEecCCceeEEeeeecCCceE-EEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 89 LHISFNQDHGCFAAGTD--HGFRIYNCDPFREIFRRDFERGGGIG-VVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 89 ~~v~fs~dg~~lasg~~--~gv~vw~~~~~~~~~~~~~~~~~~v~-~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
.++++..+|++++.|+. ..+.+||..+.+......+ ...... .+....++.+++ .+|..+.....+.+.+||..+
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~-~~~R~~~s~~~~~dg~iyv-~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDM-QVARGYQSSATMSDGRVFT-IGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCC-SSCCSSCEEEECTTSCEEE-ECCCCCSSSCCCCEEEEETTT
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCC-CccccccceEEecCCeEEE-EeCcccCCcccccceEeCCCC
Confidence 35778899999999985 3488999887654332222 111111 223334565444 444221111236799999988
Q ss_pred CcEEEEE-----ee-----------CCceeEEEEeCCeEEE-EECCEEEEEEcCCcEEEEEEeccCC-------CCceEE
Q 020784 166 SRCIGEL-----SF-----------RSEVRSVKLRRDRIIV-VLEQKIFVYNFADLKLLHQIETIAN-------PKGLCA 221 (321)
Q Consensus 166 ~~~~~~~-----~~-----------~~~v~~v~~~~~~~~~-~~~~~I~iwd~~~~~~~~~l~~~~~-------~~~~~~ 221 (321)
++....- .. ...++.+......+.. .....+..||..+.+-......... .....+
T Consensus 324 ~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~a 403 (656)
T 1k3i_A 324 KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA 403 (656)
T ss_dssp TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCce
Confidence 7754320 00 0011111111111111 1235788999876654333322111 111122
Q ss_pred Ee-eCCCceEEEeecCCCC-----------cEEEEeeCCcceEEee---cccc-ceeEEEECCCCCEEEEEeCC------
Q 020784 222 VS-QGVGSLVLVCPGLQKG-----------QVRVEHYASKRTKFIM---AHDS-RIACFALTQDGQLLATSSTK------ 279 (321)
Q Consensus 222 ~s-~~~d~~~la~sGs~dg-----------~V~i~d~~~~~~~~l~---~H~~-~V~~vafspdg~~las~S~D------ 279 (321)
+. +..++.++++ |+.++ .|.+||..+..-..+. .+.. .-.+.+..|+|++++.|+.+
T Consensus 404 v~~~~~~~~i~v~-GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 404 VMYDAVKGKILTF-GGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEETTTTEEEEE-CCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred EeccCCCCeEEEE-eCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 21 1234577776 65332 4555666554433222 1222 23455677899999999865
Q ss_pred -----CcEEEEEEcCCCcE
Q 020784 280 -----GTLVRIFNTLDGTL 293 (321)
Q Consensus 280 -----gt~IrIWd~~tg~~ 293 (321)
.+ +.+||..+.+-
T Consensus 483 ~~~~~~~-v~~ydp~t~~W 500 (656)
T 1k3i_A 483 DSTPVFT-PEIYVPEQDTF 500 (656)
T ss_dssp CCSBCCC-CEEEEGGGTEE
T ss_pred CCCcccc-eEEEcCCCCce
Confidence 45 88999988653
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.45 E-value=0.073 Score=52.96 Aligned_cols=195 Identities=9% Similarity=0.001 Sum_probs=118.7
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEee--------------eecCCceEEEEEecCCCeEEEEeCCCC
Q 020784 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRD--------------FERGGGIGVVEMLFRCNILALVGGGPD 150 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~--------------~~~~~~v~~v~~~~~~~~~~~~sg~~~ 150 (321)
...|+++....+|.+.++...+|+.+++..+........ + ....|..+....+++ +.+++
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l-~~~~v~~i~~D~~g~-lWigt---- 330 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSL-SNASARYIFQDSFNN-IWIGT---- 330 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSB-SSSCEEEEEECSSCC-EEEEE----
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCC-CCCeEEEEEEeCCCC-EEEEe----
Confidence 357999999999986654444899999877654321111 1 123455555555554 33444
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEe----------eCCceeEEEEeC-CeEEEEE-CCEEEEEEcCCcEEEEEEec--cCCC
Q 020784 151 PQYPLNKVMIWDDHQSRCIGELS----------FRSEVRSVKLRR-DRIIVVL-EQKIFVYNFADLKLLHQIET--IANP 216 (321)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~~~~----------~~~~v~~v~~~~-~~~~~~~-~~~I~iwd~~~~~~~~~l~~--~~~~ 216 (321)
.++.|..++..++....... ....|.++...+ ..+.+++ ++.|..||..+++..+ +.. ....
T Consensus 331 ---~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~ 406 (781)
T 3v9f_A 331 ---WGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIY-NKENRELLS 406 (781)
T ss_dssp ---BSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEEC-C-----CCC
T ss_pred ---cCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEE-ccCCCCCCC
Confidence 24668889887655332110 123588888776 4688888 5689999987544322 111 1112
Q ss_pred CceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceEEee---ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 217 KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 217 ~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~---~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
..+.++..+.++.+.+ |+.++-+..++..++....+. .....|.++...++|.+.+. .. +. |.+||..+++.
T Consensus 407 ~~v~~i~~d~~g~lWi--gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~G-l~~~~~~~~~~ 481 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWF--GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AG-VFVIDLASKKV 481 (781)
T ss_dssp SBEEEEEECTTSCEEE--EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TE-EEEEESSSSSC
T ss_pred cceEEEEECCCCCEEE--EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-Cc-eEEEeCCCCeE
Confidence 3456677776666665 566556777776666555443 23567999999999987664 44 56 78999888765
Q ss_pred E
Q 020784 294 L 294 (321)
Q Consensus 294 i 294 (321)
.
T Consensus 482 ~ 482 (781)
T 3v9f_A 482 I 482 (781)
T ss_dssp C
T ss_pred E
Confidence 3
No 266
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.42 E-value=0.026 Score=56.18 Aligned_cols=197 Identities=9% Similarity=0.023 Sum_probs=121.2
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEee--eecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRD--FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
...|.++...++|.+.+....+|+..|+..+.+...... . ....|..+....+++ +.+++ . +.|.++|
T Consensus 406 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~-~~~~v~~i~~d~~g~-lwigt-------~-~Gl~~~~ 475 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKN-ELLDVRVFYEDKNKK-IWIGT-------H-AGVFVID 475 (781)
T ss_dssp CSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTT-CCCCEEEEEECTTSE-EEEEE-------T-TEEEEEE
T ss_pred CcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCC-CCCeEEEEEECCCCC-EEEEE-------C-CceEEEe
Confidence 357999999999987765445788888876654321110 0 123455555444443 44444 2 5689999
Q ss_pred CCCCcEEEEEee------CCceeEEEEeCC-eEEEEEC-CEEEEEEcCCcEEEEEEeccC--CCCceEEEeeCCCceEEE
Q 020784 163 DHQSRCIGELSF------RSEVRSVKLRRD-RIIVVLE-QKIFVYNFADLKLLHQIETIA--NPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 163 ~~~~~~~~~~~~------~~~v~~v~~~~~-~~~~~~~-~~I~iwd~~~~~~~~~l~~~~--~~~~~~~~s~~~d~~~la 232 (321)
.++++....... ...|.++....+ .+.+++. +.+..||..+++. ..+.... ....+.++..+.++.+.+
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi 554 (781)
T 3v9f_A 476 LASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWL 554 (781)
T ss_dssp SSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEE
T ss_pred CCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEE
Confidence 887665332221 235778877654 5778876 6788899876653 3443211 122456777777777665
Q ss_pred eecCCCCcEEEEeeCCcceEEeecc----ccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 233 CPGLQKGQVRVEHYASKRTKFIMAH----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~~~~~~l~~H----~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
|+.+|.|..++..++....+... ...|.+++..++|.+.+++ ++. |..||..+++. ..+.
T Consensus 555 --~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~G-l~~~~~~~~~~-~~~~ 618 (781)
T 3v9f_A 555 --ATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTG-ISCYITSKKCF-YTYD 618 (781)
T ss_dssp --EETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSC-EEEEETTTTEE-EEEC
T ss_pred --EECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCc-eEEEECCCCce-EEec
Confidence 34467656677666655555432 2468999999999987754 344 66788776653 4453
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.39 E-value=0.013 Score=56.67 Aligned_cols=144 Identities=15% Similarity=0.181 Sum_probs=87.1
Q ss_pred CCCcEEEEeCCCCcEEEEEeeCC-----ceeE-EEEeCCeEEEEE-------CCEEEEEEcCCcEEEEEEeccCCCC---
Q 020784 154 PLNKVMIWDDHQSRCIGELSFRS-----EVRS-VKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIANPK--- 217 (321)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~~~-----~v~~-v~~~~~~~~~~~-------~~~I~iwd~~~~~~~~~l~~~~~~~--- 217 (321)
.|+.|.-+|.++|+.+-...... .+.+ -.+..+.+++.. ++.|+.+|..+++++-++.......
T Consensus 129 ~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~ 208 (599)
T 1w6s_A 129 LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLL 208 (599)
T ss_dssp TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHT
T ss_pred CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccc
Confidence 46899999999999887765432 2221 223455666654 4799999999999988886542210
Q ss_pred -----------------------------------ceEEEeeCCCceEEEeecCC--------------CCcEEEEeeCC
Q 020784 218 -----------------------------------GLCAVSQGVGSLVLVCPGLQ--------------KGQVRVEHYAS 248 (321)
Q Consensus 218 -----------------------------------~~~~~s~~~d~~~la~sGs~--------------dg~V~i~d~~~ 248 (321)
...++.+. ++.+++.+|.. .+.|.-+|..+
T Consensus 209 ~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~-~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~T 287 (599)
T 1w6s_A 209 LASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPG-TNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADT 287 (599)
T ss_dssp BCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETT-TTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTT
T ss_pred cccccccccccccccccccccCCCcceecCCCccccceeEeCC-CCEEEEeCCCCccccCcccCCCccccceEEEEeCCC
Confidence 01223222 22333322221 13566678777
Q ss_pred cceE-Eee--cccc-------ceeEEEEC-CCC---CEEEEEeCCCcEEEEEEcCCCcEEEEEeC
Q 020784 249 KRTK-FIM--AHDS-------RIACFALT-QDG---QLLATSSTKGTLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 249 ~~~~-~l~--~H~~-------~V~~vafs-pdg---~~las~S~Dgt~IrIWd~~tg~~i~~~~~ 299 (321)
+.+. .++ .|.. ...-+... .+| ..++.++.+|. +.++|.++|+++...+.
T Consensus 288 G~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 288 GEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGI-VYTLDRTDGALVSANKL 351 (599)
T ss_dssp CCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred CceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcE-EEEEECCCCCEeecccc
Confidence 7654 222 2321 11112222 567 56788889998 99999999999987764
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.25 E-value=0.079 Score=51.08 Aligned_cols=194 Identities=10% Similarity=0.107 Sum_probs=111.3
Q ss_pred CCCEEEEEcCCcEEEEEecCCceeEEeeeecCCce--------EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc
Q 020784 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI--------GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (321)
Q Consensus 96 dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v--------~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~ 167 (321)
+|..++++..+++.-+|..+++.+........... ..+.+ ....+.+.+ .++.|.-+|.++|+
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t-------~dg~l~AlD~~TG~ 138 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGT-------LDASVVALNKNTGK 138 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEE-------TTTEEEEEESSSCC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEe-------CCCEEEEEECCCCC
Confidence 55555555546677888888888777664101000 01111 234455554 46899999999999
Q ss_pred EEEEEeeCC-----cee-EEEEeCC------eEEEEE-------CCEEEEEEcCCcEEEEEEeccCCC------------
Q 020784 168 CIGELSFRS-----EVR-SVKLRRD------RIIVVL-------EQKIFVYNFADLKLLHQIETIANP------------ 216 (321)
Q Consensus 168 ~~~~~~~~~-----~v~-~v~~~~~------~~~~~~-------~~~I~iwd~~~~~~~~~l~~~~~~------------ 216 (321)
.+-...... .+. +-.+..+ .+++.. ++.|+.+|..+++++-+.......
T Consensus 139 ~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~ 218 (582)
T 1flg_A 139 VVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVT 218 (582)
T ss_dssp EEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEES
T ss_pred EEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccc
Confidence 887765432 121 1112223 444443 468999999999988776432100
Q ss_pred -----------------------------CceEEEeeCCCceEEEeecC-----------C-------C----CcEEEEe
Q 020784 217 -----------------------------KGLCAVSQGVGSLVLVCPGL-----------Q-------K----GQVRVEH 245 (321)
Q Consensus 217 -----------------------------~~~~~~s~~~d~~~la~sGs-----------~-------d----g~V~i~d 245 (321)
-...++.+.. +.+++.+|. . | +.|.-+|
T Consensus 219 g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~-g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD 297 (582)
T 1flg_A 219 GDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAET-NTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVD 297 (582)
T ss_dssp SCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTT-TEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEEC
T ss_pred cccccccCCCccccccccccccccCCccccCCceEcCCC-CEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEe
Confidence 0112333222 233332331 1 2 4676788
Q ss_pred eCCcceE-Eee--cccc-------ceeEEEEC-CCCC---EEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 246 YASKRTK-FIM--AHDS-------RIACFALT-QDGQ---LLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 246 ~~~~~~~-~l~--~H~~-------~V~~vafs-pdg~---~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
..++.+. .++ .|.. ...-+... .+|+ .++.++.+|. +.++|..+|+++.++..+
T Consensus 298 ~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 298 PSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGF-FYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSE-EEEEETTTCCEEEEEESS
T ss_pred CCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCce-EEEEECCCCCEecccccc
Confidence 8777655 332 3421 11112222 5674 7888999999 999999999999887654
No 269
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.22 E-value=0.11 Score=46.59 Aligned_cols=160 Identities=11% Similarity=0.115 Sum_probs=94.4
Q ss_pred CCcEEEEeCCCCcEEEEEeeCCceeEEEEeCCe--------EEEEE-----CCEEEEEEcC-CcEEEEEEe-------cc
Q 020784 155 LNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR--------IIVVL-----EQKIFVYNFA-DLKLLHQIE-------TI 213 (321)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~--------~~~~~-----~~~I~iwd~~-~~~~~~~l~-------~~ 213 (321)
.+.+.++|+ +|+.+..+.. ..+..|.+-+.. +++++ .++|++|++. ....+..+. ..
T Consensus 49 ~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATA 126 (355)
T ss_dssp TTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECC
T ss_pred CCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCC
Confidence 367999999 7888877754 456666654432 34443 3589999773 222244442 11
Q ss_pred -CCCCceEEEeeCCCceEEEeecCCCCcEEEEeeC---Cc-----ceEEeeccccceeEEEECCCCCEEEEEeCCCcEEE
Q 020784 214 -ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA---SK-----RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVR 284 (321)
Q Consensus 214 -~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~---~~-----~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~Ir 284 (321)
..+.++|.+.....+.+.++....+|.+..|++. .+ .+.+|.- .+.+..|+..+...+|..+-+|.. |.
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~G-Iw 204 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEA-IW 204 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTE-EE
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccce-EE
Confidence 3445565554332344333346777988888763 21 1234432 457888999988778888888876 65
Q ss_pred EEEcC-----CCcEEEEEeCCC---cceeEEE--eecCc-eEEEe
Q 020784 285 IFNTL-----DGTLLQEECCPS---ISAQSGL--WLSSA-WLRVL 318 (321)
Q Consensus 285 IWd~~-----tg~~i~~~~~g~---~~~~~~~--s~d~~-~la~~ 318 (321)
.++.+ +++++..+..++ +...+.+ ..+++ ||.++
T Consensus 205 ~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS 249 (355)
T 3amr_A 205 KFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS 249 (355)
T ss_dssp EEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE
T ss_pred EEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEE
Confidence 56654 466776654342 2334444 35555 76554
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.21 E-value=0.13 Score=47.41 Aligned_cols=201 Identities=9% Similarity=0.060 Sum_probs=105.3
Q ss_pred CeEEEEEcC-CCCEEEEEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 87 TLLHISFNQ-DHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 87 ~V~~v~fs~-dg~~lasg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
.-..++|+| ++..|..... +.|+.+|.+......... ....-..+++..+++.+.++..+.. .....+.+.+ .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~--~~~~~v~~~~-~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNN--NDRPNNYILT-R 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSC--TTSEEEEEEE-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCC--cccceEEEEe-C
Confidence 456899997 3444444443 557778877655433222 1345667888888886666653211 0011233333 3
Q ss_pred CCcEE--EEEeeCCceeEEEEeC-C-eEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC
Q 020784 165 QSRCI--GELSFRSEVRSVKLRR-D-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (321)
Q Consensus 165 ~~~~~--~~~~~~~~v~~v~~~~-~-~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d 238 (321)
.+... ..+.....+..+++++ + .++++. .+.|..|+...+.....+..... ..-..+..++++..|.++....
T Consensus 213 ~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~-~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 213 ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS-GWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS-SCCEEEEECTTSSEEEEEETTT
T ss_pred CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC-CcceeEEEcCCCCEEEEEECCC
Confidence 33221 2333234567788887 3 455553 36999999987664322222111 1122334445555333335666
Q ss_pred CcEEEEeeCC--cce---EEeecc---------------cccee-EEEEC--------CCCCEEEEEeCCCcEEEEEEcC
Q 020784 239 GQVRVEHYAS--KRT---KFIMAH---------------DSRIA-CFALT--------QDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 239 g~V~i~d~~~--~~~---~~l~~H---------------~~~V~-~vafs--------pdg~~las~S~Dgt~IrIWd~~ 289 (321)
+.|..++... +.+ .++.+. -.... .++.. ++|.+.++=...+. |+.++ .
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~-~ 369 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILT-P 369 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEEC-T
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEEC-C
Confidence 7888766542 211 122211 11233 56653 45777766555566 99998 5
Q ss_pred CCcEEE
Q 020784 290 DGTLLQ 295 (321)
Q Consensus 290 tg~~i~ 295 (321)
+|+...
T Consensus 370 ~G~v~~ 375 (430)
T 3tc9_A 370 QGRVTT 375 (430)
T ss_dssp TSEEEE
T ss_pred CCcEEE
Confidence 675543
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.10 E-value=0.11 Score=44.46 Aligned_cols=191 Identities=8% Similarity=0.072 Sum_probs=107.3
Q ss_pred CCeEEEEEcCCCCEEEEEcC-Cc-EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~g-v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
..+..++|+|++..|.+..+ ++ |...|.+ ++......+........+++..++ .++++..+ ++.+.++++
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~------~~~l~~~~v 98 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDER------DYAIYVISL 98 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEETT------TTEEEEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEECC------CCcEEEEEc
Confidence 36999999998776665444 44 4455555 555444444112466677776555 45555533 477888887
Q ss_pred CCCc---EEEEEeeC-------CceeEEEEeCC--eEEEEEC-CEEEEEEcC---CcEEEEEEec-------cCCCCceE
Q 020784 164 HQSR---CIGELSFR-------SEVRSVKLRRD--RIIVVLE-QKIFVYNFA---DLKLLHQIET-------IANPKGLC 220 (321)
Q Consensus 164 ~~~~---~~~~~~~~-------~~v~~v~~~~~--~~~~~~~-~~I~iwd~~---~~~~~~~l~~-------~~~~~~~~ 220 (321)
.... .+....+. ...-.+++++. +++++.+ +...+|.+. ..+.++.+.. .......+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 6443 22333321 13467888764 6777754 333444442 1111222211 11223456
Q ss_pred EEeeCCCceEEEeecCCCCcEEEEeeCCcceE--Eee-ccc------cceeEEEECCCCCEEEEEeCCCcEEEEEEc
Q 020784 221 AVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK--FIM-AHD------SRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (321)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~--~l~-~H~------~~V~~vafspdg~~las~S~Dgt~IrIWd~ 288 (321)
++.+.. +.+++. ...++.+.+.|.+.+.+. .|. +.. .....|+|.++|++.++ |+.+- +.+|.-
T Consensus 179 ~~dp~t-g~lliL-S~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~-~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQK-NTLLVL-SHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNR-FYRFTP 251 (255)
T ss_dssp EEETTT-TEEEEE-ETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTE-EEEEEC
T ss_pred EEcCCC-CeEEEE-ECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCce-EEEEEe
Confidence 666653 345554 455567777887766443 333 221 25789999999997765 77765 666653
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.04 E-value=0.18 Score=45.78 Aligned_cols=204 Identities=8% Similarity=-0.054 Sum_probs=112.8
Q ss_pred CCeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 86 PTLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
.....++|++.+..|. +-.. +.|..++.+.......... .......+++.+....+.++..+ .+.|.+.++
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~lY~~d~~------~~~I~~~~~ 188 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSG------TSRIEVANL 188 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS-SCSCCCCEEEETTTTEEEEEETT------TTEEEECBT
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC-CCCCccEEEEEeCCCeEEEEcCC------CCeEEEEeC
Confidence 3578899997655554 4333 4466777665433222111 01122345666655555555432 467888887
Q ss_pred CCCcEEEEEeeC-CceeEEEEeC--CeEEEEE--C-CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCC
Q 020784 164 HQSRCIGELSFR-SEVRSVKLRR--DRIIVVL--E-QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 164 ~~~~~~~~~~~~-~~v~~v~~~~--~~~~~~~--~-~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (321)
+.......+... ..+..+.+++ ..++.+. . ..|..+++........+......-.-++++++.+ .+.. +-..
T Consensus 189 dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~-~lY~-aD~~ 266 (386)
T 3v65_B 189 DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR-RMYW-VDAK 266 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGT-EEEE-EETT
T ss_pred CCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCC-EEEE-EECC
Confidence 654332222222 3577888885 3455553 2 5788888754322222222211112345554433 3333 3566
Q ss_pred CCcEEEEeeCCcceE-EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 238 KGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 238 dg~V~i~d~~~~~~~-~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
.+.|...++...... .+.........|++ ..+.++.+-...+. |..+|..+|+.+..+..+
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~-V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 267 HHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS-INSANKFTGKNQEIIRNK 328 (386)
T ss_dssp TTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE-EEEEETTTCCSCEEEECS
T ss_pred CCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCe-EEEEECCCCcceEEEccC
Confidence 678888887654433 33334556788998 34566666666666 888998888877777544
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.92 E-value=0.18 Score=43.85 Aligned_cols=183 Identities=10% Similarity=-0.083 Sum_probs=92.8
Q ss_pred CCeEEEEEcCCCCEEEEEcC-Cc--EEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 86 PTLLHISFNQDHGCFAAGTD-HG--FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~-~g--v~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
.....++|++||+++++... ++ +..++..+++...............++.. .+..+.++.. ..+.|.++|
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~------~~g~i~~~d 144 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPL-SDTQYLTADS------YRGAIWLID 144 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEES-SSSEEEEEET------TTTEEEEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCccccc-CCCcEEEEEC------CCCeEEEEe
Confidence 36789999999997666543 44 44455555554322221001111222222 2333333331 247788888
Q ss_pred CCCCcE-EEEEe-------e-C--CceeEEEEeCCeEEEEE--CCEEEEEEcCC-cEE--EEEEeccCCCCceEEEeeCC
Q 020784 163 DHQSRC-IGELS-------F-R--SEVRSVKLRRDRIIVVL--EQKIFVYNFAD-LKL--LHQIETIANPKGLCAVSQGV 226 (321)
Q Consensus 163 ~~~~~~-~~~~~-------~-~--~~v~~v~~~~~~~~~~~--~~~I~iwd~~~-~~~--~~~l~~~~~~~~~~~~s~~~ 226 (321)
...++. +.... . . .....+....+.++++. .+.|..|++.. ++. ...+.....+. -+++. +
T Consensus 145 ~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~-gi~vd--~ 221 (306)
T 2p4o_A 145 VVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNID-DFAFD--V 221 (306)
T ss_dssp TTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCS-SEEEB--T
T ss_pred CCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCC-CeEEC--C
Confidence 765431 11110 0 0 12344544555677775 35999999864 321 12222212222 23444 4
Q ss_pred CceEEEeecCCCCcEEEEeeCCcceEE---eeccccceeEEEEC---CCCCEEEEEeCCC
Q 020784 227 GSLVLVCPGLQKGQVRVEHYASKRTKF---IMAHDSRIACFALT---QDGQLLATSSTKG 280 (321)
Q Consensus 227 d~~~la~sGs~dg~V~i~d~~~~~~~~---l~~H~~~V~~vafs---pdg~~las~S~Dg 280 (321)
++.+.++ ....+.|.+++.. +.+.. +...-..+++++|. |++..|..++..+
T Consensus 222 dG~l~va-~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 222 EGNLYGA-THIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TCCEEEE-CBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCCEEEE-eCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 5566553 4556788888765 33322 22223568999998 8876554444333
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.84 E-value=0.26 Score=44.62 Aligned_cols=192 Identities=7% Similarity=-0.020 Sum_probs=105.5
Q ss_pred eEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc
Q 020784 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (321)
Q Consensus 88 V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~ 167 (321)
-.|.+..+ ..+|+.+....|+.++++......... .......+++.+..+.+..+.. ..+.|..++.+.+.
T Consensus 79 ~~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~------~~~~I~r~~~~g~~ 149 (386)
T 3v65_B 79 RSCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDV------TLDRILRANLNGSN 149 (386)
T ss_dssp SCEEECSS-CCEEEEECBSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCC
T ss_pred CeECCccc-cceeEeecCccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeC------CCCcEEEEecCCCC
Confidence 44555555 345556666677777776554332222 1344666777776666666653 34789999987665
Q ss_pred EEEEEeeC-CceeEEEEe--CCeEEEEEC--CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC-CcE
Q 020784 168 CIGELSFR-SEVRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-GQV 241 (321)
Q Consensus 168 ~~~~~~~~-~~v~~v~~~--~~~~~~~~~--~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d-g~V 241 (321)
....+... ..+..+++. ...++++.. +.|.+.++........+......-.-+++.+.. +.+.. +.... +.|
T Consensus 150 ~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~-g~ly~-td~~~~~~I 227 (386)
T 3v65_B 150 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPME-GTIYW-TDWGNTPRI 227 (386)
T ss_dssp EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTT-TEEEE-EECSSSCEE
T ss_pred cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCC-CeEEE-eccCCCCEE
Confidence 43322221 244556665 456666643 588888876433222222211111223444332 33333 33444 677
Q ss_pred EEEeeCCcceEEe-eccccceeEEEECCCCC-EEEEEeCCCcEEEEEEcCCC
Q 020784 242 RVEHYASKRTKFI-MAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 242 ~i~d~~~~~~~~l-~~H~~~V~~vafspdg~-~las~S~Dgt~IrIWd~~tg 291 (321)
...++.......+ ...-...+.|+|+|++. +.++=+..+. |..+|+...
T Consensus 228 ~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~-I~~~d~dG~ 278 (386)
T 3v65_B 228 EASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGS 278 (386)
T ss_dssp EEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE-EEEECTTSC
T ss_pred EEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE-EEEEeCCCC
Confidence 7777655444433 23344589999997655 4444455556 999998643
No 275
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.80 E-value=0.38 Score=50.18 Aligned_cols=177 Identities=8% Similarity=0.060 Sum_probs=104.2
Q ss_pred EEEEEecCCceeEEeeeecCCceEEEE-EecCC---CeEEEEeCC---CCCCCCCCcEEEEeCCCCc--EEEEEeeCCce
Q 020784 108 FRIYNCDPFREIFRRDFERGGGIGVVE-MLFRC---NILALVGGG---PDPQYPLNKVMIWDDHQSR--CIGELSFRSEV 178 (321)
Q Consensus 108 v~vw~~~~~~~~~~~~~~~~~~v~~v~-~~~~~---~~~~~~sg~---~~~~~~d~~v~iWD~~~~~--~~~~~~~~~~v 178 (321)
+++.|-.+.+.+...++..+..+.+++ +.+.. ..++++++- .+.....|.|.++++..++ .+......+.|
T Consensus 809 i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v 888 (1158)
T 3ei3_A 809 LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 888 (1158)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCE
T ss_pred EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcC
Confidence 445565555555555552222333333 23322 445544421 1112245889999986544 34445567789
Q ss_pred eEEEEeCCeEEEEECCEEEEEEcCCcEEEEEEec-cCCCCceEEEeeCCCceEEEeecCCCCcEEE--EeeCCcceEEee
Q 020784 179 RSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVCPGLQKGQVRV--EHYASKRTKFIM 255 (321)
Q Consensus 179 ~~v~~~~~~~~~~~~~~I~iwd~~~~~~~~~l~~-~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i--~d~~~~~~~~l~ 255 (321)
++++--..+++++.+++|++|++...+.++ ... ....+....+...+ .++++ |+.-..|.+ |+.....+..+.
T Consensus 889 ~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~--~~I~v-gD~~~Sv~~~~y~~~~~~L~~~a 964 (1158)
T 3ei3_A 889 YSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKG--DFILV-GDLMRSVLLLAYKPMEGNFEEIA 964 (1158)
T ss_dssp EEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEET--TEEEE-EESSBCEEEEEEETTTTEEEEEE
T ss_pred EEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeeccccEEEEEEeccC--CEEEE-EEhhheEEEEEEEcCCCeEEEEE
Confidence 999876778889999999999997655444 221 11112233443333 34443 777777777 554445555444
Q ss_pred --ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCC
Q 020784 256 --AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 256 --~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~t 290 (321)
.+...|+++.|--++ .++.+-.+|. |.|.....
T Consensus 965 ~D~~~~~vta~~~ld~~-t~l~aD~~gN-l~vl~~~~ 999 (1158)
T 3ei3_A 965 RDFNPNWMSAVEILDDD-NFLGAENAFN-LFVCQKDS 999 (1158)
T ss_dssp ECCSCBCEEEEEEEETT-EEEEEETTSE-EEEEEECT
T ss_pred eecccccEEEEEEEccC-cEEEEcCCCc-EEEEecCC
Confidence 356678999986554 5666888888 88887654
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.73 E-value=0.36 Score=44.57 Aligned_cols=199 Identities=10% Similarity=0.037 Sum_probs=105.7
Q ss_pred CeEEEEEcCC---CCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 87 TLLHISFNQD---HGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 87 ~V~~v~fs~d---g~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
.-..++|+++ |.++++-..+.|+.++.+++....... .......+++.++++ +.++..+.. .....+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~-lyVad~~~~--~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQSS--DTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC--CCSCEEEEEECTTCC-EEEEECCSC--TTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec--CCCCccEEEECCCCC-EEEEcCCCC--cccceEEEEEC
Confidence 3458999985 554444333567788876665433222 134467788888888 444432110 00122333333
Q ss_pred CCCcE-EEEEeeCCceeEEEEeC-C-eEEEEE--CCEEEEEEcCCcEEEEEEe-ccCCCC-ceEEEeeCCCceEEEeecC
Q 020784 164 HQSRC-IGELSFRSEVRSVKLRR-D-RIIVVL--EQKIFVYNFADLKLLHQIE-TIANPK-GLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 164 ~~~~~-~~~~~~~~~v~~v~~~~-~-~~~~~~--~~~I~iwd~~~~~~~~~l~-~~~~~~-~~~~~s~~~d~~~la~sGs 236 (321)
..+.. ...+..-.....+++++ + .++++. .+.|+.+|..+++....+. ...... .-+++++ ++..|.++-.
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp--dG~~LYvad~ 292 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP--TGDWAYIIYN 292 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT--TSSEEEEEET
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC--CCCEEEEEeC
Confidence 22211 11222223456677776 3 455554 3589999988676533332 221111 1245544 4453332356
Q ss_pred CCCcEEEEeeC--Ccce---EEeecc---------------ccceeEEEE---------CCCCCEEEEEeCCCcEEEEEE
Q 020784 237 QKGQVRVEHYA--SKRT---KFIMAH---------------DSRIACFAL---------TQDGQLLATSSTKGTLVRIFN 287 (321)
Q Consensus 237 ~dg~V~i~d~~--~~~~---~~l~~H---------------~~~V~~vaf---------spdg~~las~S~Dgt~IrIWd 287 (321)
..+.|+.+++. ++.+ .++.+. -.....++| ..+|.+.++-...+. |++++
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~~ 371 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVLT 371 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEEC
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEEC
Confidence 66788876654 2221 222221 124678999 788888777666666 99998
Q ss_pred cCCCcEE
Q 020784 288 TLDGTLL 294 (321)
Q Consensus 288 ~~tg~~i 294 (321)
. +|+..
T Consensus 372 ~-~G~v~ 377 (433)
T 4hw6_A 372 P-EGRVT 377 (433)
T ss_dssp T-TSEEE
T ss_pred C-CCCEE
Confidence 4 67543
No 277
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.72 E-value=0.15 Score=49.74 Aligned_cols=194 Identities=9% Similarity=0.000 Sum_probs=97.8
Q ss_pred EEEEcC-CCCEEEEEcCC------------cEEEEEecCCceeEEeeee--cCCceEEEEEecCCCeEEEEeCCCCCCCC
Q 020784 90 HISFNQ-DHGCFAAGTDH------------GFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (321)
Q Consensus 90 ~v~fs~-dg~~lasg~~~------------gv~vw~~~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~sg~~~~~~~ 154 (321)
++++.+ +|++++.|+.+ .+.+||..+.+........ +......+.+..++.++ +.+|. .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~ly-v~GG~-----~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIV-VTGGN-----D 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEE-EECSS-----S
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEE-EeCCC-----C
Confidence 567777 89988887641 2568887776532211110 11112223444555544 44443 2
Q ss_pred CCcEEEEeCCCCcEEEEEeeCC--ceeEEEEe-CCeEEEEEC--------CEEEEEEcCCcEEEEEEec-----cCCCCc
Q 020784 155 LNKVMIWDDHQSRCIGELSFRS--EVRSVKLR-RDRIIVVLE--------QKIFVYNFADLKLLHQIET-----IANPKG 218 (321)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~~--~v~~v~~~-~~~~~~~~~--------~~I~iwd~~~~~~~~~l~~-----~~~~~~ 218 (321)
++.+.+||..+++....-.... .-.++... ..++++..+ +.+.+||..+.+- ..+.. ......
T Consensus 264 ~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W-~~~~~~~~~p~~~~~~ 342 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW-TSLPNAKVNPMLTADK 342 (656)
T ss_dssp TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE-EEETTSCSGGGCCCCT
T ss_pred CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc-eeCCCccccccccccc
Confidence 4589999998876554322221 11233443 445555433 4799999987653 22211 000000
Q ss_pred eEEEeeCCCceEEEeecCCCC---------cEEEEeeCCcc-eEEeeccc---------cceeEEEEC-CCCCEEEEEeC
Q 020784 219 LCAVSQGVGSLVLVCPGLQKG---------QVRVEHYASKR-TKFIMAHD---------SRIACFALT-QDGQLLATSST 278 (321)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~dg---------~V~i~d~~~~~-~~~l~~H~---------~~V~~vafs-pdg~~las~S~ 278 (321)
...+ ..++.++++ |..+| .+.+||..... ......+. ..-.++.|. .++++++.|+.
T Consensus 343 ~~~~--~~~~~iyv~-Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~ 419 (656)
T 1k3i_A 343 QGLY--RSDNHAWLF-GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGS 419 (656)
T ss_dssp TGGG--TTTCSCCEE-ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCB
T ss_pred ccee--ecCCceEEE-ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCC
Confidence 0011 112233333 43333 45667766543 12221111 123455554 47888888885
Q ss_pred CC-----------cEEEEEEcCCCcEE
Q 020784 279 KG-----------TLVRIFNTLDGTLL 294 (321)
Q Consensus 279 Dg-----------t~IrIWd~~tg~~i 294 (321)
++ . |.+||..+.+-.
T Consensus 420 ~~~~~~~~~~~~~~-v~~yd~~~~~W~ 445 (656)
T 1k3i_A 420 PDYQDSDATTNAHI-ITLGEPGTSPNT 445 (656)
T ss_dssp SSSSSSBCCCCEEE-EECCSTTSCCEE
T ss_pred CCCCCCCcCCcceE-EEcCCCCCCCee
Confidence 43 4 888898887643
No 278
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.72 E-value=0.3 Score=43.56 Aligned_cols=202 Identities=8% Similarity=-0.050 Sum_probs=111.5
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 87 ~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
....++|++.+..|. +-.. +.|..++.+.......... .......+++.+....+.++.. ..+.|.+.+.+
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~------~~~~I~~~~~d 146 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDS------GTSRIEVANLD 146 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEEEEETT
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC-CCCCccEEEEecCCCeEEEEcC------CCCeEEEEcCC
Confidence 578899997655555 4333 4466777665443222111 0122345566665555555543 24789999887
Q ss_pred CCcEEEEEeeC-CceeEEEEeC--CeEEEEE--C-CEEEEEEcCCcEEEEEE-eccCCCCceEEEeeCCCceEEEeecCC
Q 020784 165 QSRCIGELSFR-SEVRSVKLRR--DRIIVVL--E-QKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 165 ~~~~~~~~~~~-~~v~~v~~~~--~~~~~~~--~-~~I~iwd~~~~~~~~~l-~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (321)
.......+... ..+..+++++ ..++.+. . +.|..+++..... ..+ ......-.-+++.++.+ .+.. +-..
T Consensus 147 G~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~-~lY~-aD~~ 223 (349)
T 3v64_C 147 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGR-RMYW-VDAK 223 (349)
T ss_dssp SCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTT-EEEE-EETT
T ss_pred CCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCC-EEEE-EECC
Confidence 54332222222 3577888885 3455553 2 5788887754322 222 11111112244444332 3333 3556
Q ss_pred CCcEEEEeeCCcceE-EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 238 KGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 238 dg~V~i~d~~~~~~~-~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
.+.|...++...... .+.........|++. ++.++.+-...+. |..+|..+|+.+..+..+
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~-V~~~~~~~G~~~~~i~~~ 285 (349)
T 3v64_C 224 HHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKS-INSANKFTGKNQEIIRNK 285 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTE-EEEEETTTCCSCEEEECS
T ss_pred CCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCe-EEEEEccCCCccEEeccC
Confidence 678888887654433 333345567888884 4566666655666 888887788877666543
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.67 E-value=0.12 Score=47.69 Aligned_cols=137 Identities=8% Similarity=-0.007 Sum_probs=81.1
Q ss_pred ceeEEEEeC---CeEEEEEC-CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCC----cEEEEeeCC
Q 020784 177 EVRSVKLRR---DRIIVVLE-QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG----QVRVEHYAS 248 (321)
Q Consensus 177 ~v~~v~~~~---~~~~~~~~-~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg----~V~i~d~~~ 248 (321)
.+..+++++ ..++++.. +.|+.+|+..++...... .....+.+..++++..|.++...++ .+.+.+...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 466788885 34566654 689999998766543333 2223455566666663333343222 222233222
Q ss_pred cce--EEeeccccceeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC--CcceeEEEeecCceEEEe
Q 020784 249 KRT--KFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEECCP--SISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 249 ~~~--~~l~~H~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g--~~~~~~~~s~d~~~la~~ 318 (321)
... ..+. .......++++| +|.++++-..++. |+.|+..+++.......+ .....++++++|++|.++
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~-V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQ-VFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTE-EEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCE-EEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 111 2232 234578899999 7887777666777 999999877653323332 335567888999977665
No 280
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.60 E-value=0.36 Score=43.02 Aligned_cols=194 Identities=7% Similarity=-0.019 Sum_probs=107.4
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
...+|.+..+++ +|..+....|+..+++......... .......+++.+..+.+..+.. ..+.|..++...
T Consensus 34 d~~~C~~~~~~~-~ll~~~~~~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~------~~~~I~r~~~~g 104 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFANRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDV------TLDRILRANLNG 104 (349)
T ss_dssp TSSCEEESSSCC-EEEEECBSCEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred CCCcccccccCc-eeEeecccceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEec------cCCceEEEecCC
Confidence 345676666644 5555555667766665543322222 1234566777776677766652 347899999876
Q ss_pred CcEEEEEeeC-CceeEEEEe--CCeEEEEEC--CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC-C
Q 020784 166 SRCIGELSFR-SEVRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-G 239 (321)
Q Consensus 166 ~~~~~~~~~~-~~v~~v~~~--~~~~~~~~~--~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d-g 239 (321)
+.....+... ..+..+++. ...++.+.. +.|.+.++........+......-.-+++.+. ++.++. +.... +
T Consensus 105 ~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~-~g~ly~-td~~~~~ 182 (349)
T 3v64_C 105 SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPM-EGTIYW-TDWGNTP 182 (349)
T ss_dssp CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETT-TTEEEE-EECSSSC
T ss_pred CCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecC-cCeEEE-eccCCCC
Confidence 6533322221 245566665 456666643 58999998644322222221111122344432 233333 34444 6
Q ss_pred cEEEEeeCCcceEEee-ccccceeEEEECCCCCE-EEEEeCCCcEEEEEEcCCC
Q 020784 240 QVRVEHYASKRTKFIM-AHDSRIACFALTQDGQL-LATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 240 ~V~i~d~~~~~~~~l~-~H~~~V~~vafspdg~~-las~S~Dgt~IrIWd~~tg 291 (321)
.|...++.......+. ..-...+.|+|+|++.. ..+-+..+. |..+|+...
T Consensus 183 ~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~-I~~~~~dG~ 235 (349)
T 3v64_C 183 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGS 235 (349)
T ss_dssp EEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSC
T ss_pred EEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE-EEEEeCCCC
Confidence 7777776554444432 23445799999986554 444454556 999998643
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.42 E-value=0.43 Score=41.78 Aligned_cols=202 Identities=8% Similarity=-0.094 Sum_probs=111.8
Q ss_pred CeEEEEEcCCCCEEEEE-cC-CcEEEEEecC----CceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 87 TLLHISFNQDHGCFAAG-TD-HGFRIYNCDP----FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg-~~-~gv~vw~~~~----~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
....++|++++..|... .. +.|..++.+. ......... .-.....+++.+.+..+.++.. ..+.|.+
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavd~~~~~ly~~d~------~~~~I~~ 103 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDS------VLGTVSV 103 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEEE
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC-CCCCcCEEEEeecCCeEEEEEC------CCCEEEE
Confidence 57899999876555544 33 4466777664 111111110 0123345666655555555442 2478999
Q ss_pred EeCCCCcEEEEEee-CCceeEEEEeC--CeEEEEEC---CEEEEEEcCCcEEEEEEec-cCCCCceEEEeeCCCceEEEe
Q 020784 161 WDDHQSRCIGELSF-RSEVRSVKLRR--DRIIVVLE---QKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~--~~~~~~~~---~~I~iwd~~~~~~~~~l~~-~~~~~~~~~~s~~~d~~~la~ 233 (321)
.|.........+.. -..+..+++++ ..++.+.. +.|..+++... ....+.. ....-.-+++.++. +.+..
T Consensus 104 ~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~-~~lY~- 180 (316)
T 1ijq_A 104 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLS-GRLYW- 180 (316)
T ss_dssp EETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTT-TEEEE-
T ss_pred EeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccC-CEEEE-
Confidence 99875443333332 23677888875 34555532 47888887532 2233322 11111234444433 23333
Q ss_pred ecCCCCcEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 234 PGLQKGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
+-...+.|...++......++.. .-.....|++. .+.++.+-...+. |..+|..+|+.+..+..+
T Consensus 181 ~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~-V~~~~~~~g~~~~~i~~~ 248 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNLLAEN 248 (316)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE-EEEEETTTCCCCEEEECS
T ss_pred EECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe-EEEEeCCCCcceEEEecC
Confidence 35666788888876544443322 23457888886 4666666665666 999998888877777544
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.36 E-value=0.51 Score=41.91 Aligned_cols=151 Identities=8% Similarity=0.080 Sum_probs=92.7
Q ss_pred EEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCC---------ceeEEEE---eCC-eEEEEE-------
Q 020784 133 VEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS---------EVRSVKL---RRD-RIIVVL------- 192 (321)
Q Consensus 133 v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~---------~v~~v~~---~~~-~~~~~~------- 192 (321)
..|......+.+++- ..++|..||...+..... .+.. .+..+.+ .++ +++++.
T Consensus 18 ~~wd~~~g~~~vs~l------~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 18 TIYDRTRQVFYQSNL------YKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp EEEETTTTEEEEEET------TTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCcCCCCEEEEEec------cCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 455554555655552 358999999876544332 3321 3578888 444 565542
Q ss_pred --------CCEEEEEEcC---CcEEEEEEecc----C-------CCCceEEEeeCCCceEEEeecCCC-CcEEEEeeCCc
Q 020784 193 --------EQKIFVYNFA---DLKLLHQIETI----A-------NPKGLCAVSQGVGSLVLVCPGLQK-GQVRVEHYASK 249 (321)
Q Consensus 193 --------~~~I~iwd~~---~~~~~~~l~~~----~-------~~~~~~~~s~~~d~~~la~sGs~d-g~V~i~d~~~~ 249 (321)
+..|..||+. +++.+...... . .......+..+++++..+. ++.. +.|...+...+
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt-~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA-FALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE-EEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe-CCCCCCeEEEEeCCCC
Confidence 2579999998 77776665421 0 1223667777777777663 5555 55544444333
Q ss_pred ceEEee------ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCc
Q 020784 250 RTKFIM------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (321)
Q Consensus 250 ~~~~l~------~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~ 292 (321)
.+..+. ...-..+.|+++|+|.+|+....+|. +..||+.+-.
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~-L~~fD~~~pv 217 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA-LTAFDVSKPY 217 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS-EEEEECSSSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe-EEEEcCCCCc
Confidence 333221 11223679999999998888766888 8889988543
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.30 E-value=1 Score=44.91 Aligned_cols=184 Identities=7% Similarity=-0.078 Sum_probs=99.2
Q ss_pred EEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc----EEEEEe-
Q 020784 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR----CIGELS- 173 (321)
Q Consensus 99 ~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~----~~~~~~- 173 (321)
+|+......|+..+++......... .......+++....+.+.++.. ..+.|+.+++.... ....+.
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~--~~~~~~gl~~d~~~~~lY~sD~------~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECS
T ss_pred ccccccccceeEeeccCCcceeeec--CCCceEEEeecccCCeeEEeec------cceeEEEEeccCCCCCcceeEEEec
Confidence 5555666677777776554322222 1345566677776666666653 24778888886531 122222
Q ss_pred eCCceeEEEEe--CCeEEEEEC--CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCC-CCcEEEEeeCC
Q 020784 174 FRSEVRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ-KGQVRVEHYAS 248 (321)
Q Consensus 174 ~~~~v~~v~~~--~~~~~~~~~--~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~-dg~V~i~d~~~ 248 (321)
.-..+..|++. ...++++-. +.|.+.++........+......-.-+++.+.. +.++. +-.. .+.|...++..
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~-g~LYw-tD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH-GFMYW-TDWGTPAKIKKGGLNG 546 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTT-TEEEE-EECSSSCEEEEEETTS
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCC-CCEEE-ecCCCCCeEEEEecCC
Confidence 11245566665 456777643 599999987544322222221111234444432 33333 2322 25677777765
Q ss_pred cceEEee-ccccceeEEEECCCCCEEEEE-eCCCcEEEEEEcCCCcE
Q 020784 249 KRTKFIM-AHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDGTL 293 (321)
Q Consensus 249 ~~~~~l~-~H~~~V~~vafspdg~~las~-S~Dgt~IrIWd~~tg~~ 293 (321)
....++. ..-...+.|++++.+..|.-+ ...+. |..+++.....
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~-I~~~d~dG~~~ 592 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNR 592 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSC
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc-EEEEecCCCce
Confidence 5544443 334678999999765544444 44555 99999865443
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.27 E-value=0.65 Score=42.26 Aligned_cols=205 Identities=8% Similarity=-0.071 Sum_probs=114.4
Q ss_pred CCeEEEEEcCCCCEEEEEc-C-CcEEEEEecCC----ceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 86 PTLLHISFNQDHGCFAAGT-D-HGFRIYNCDPF----REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~-~-~gv~vw~~~~~----~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
..+..++|++.+..|.-.. . +.|..++++.. ........ .......+++.+....+.++.. ..+.|.
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavD~~~~~lY~~d~------~~~~I~ 184 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDS------VLGTVS 184 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS-SCSCEEEEEEETTTTEEEEEET------TTTEEE
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC-CCCCcccEEEEecCCceEEEEC------CCCeEE
Confidence 4688999998665555443 3 44666676542 11111110 1234456677765555555543 247899
Q ss_pred EEeCCCCcEEEEEee-CCceeEEEEeC--CeEEEEE---CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 160 IWDDHQSRCIGELSF-RSEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 160 iWD~~~~~~~~~~~~-~~~v~~v~~~~--~~~~~~~---~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
+.|++.......+.. -..+..+++++ ..++.+. ...|...++........+......-.-+++.+..+ .+..
T Consensus 185 ~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~-~lY~- 262 (400)
T 3p5b_L 185 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG-RLYW- 262 (400)
T ss_dssp EECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTT-EEEE-
T ss_pred EEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCC-EEEE-
Confidence 999876554333332 23578888876 3455553 24788888764332222222111112344444332 3333
Q ss_pred ecCCCCcEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC
Q 020784 234 PGLQKGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS 301 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~ 301 (321)
+-...+.|...++......++.. .-.....|++. .+.++.+-...+. |..+|..+|+.+.++..+.
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~-V~~~~~~~G~~~~~i~~~~ 331 (400)
T 3p5b_L 263 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNLLAENL 331 (400)
T ss_dssp EETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS-EEEEESSSCCCCEEEECSC
T ss_pred EECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe-EEEEEcCCCCceEEEecCC
Confidence 35556788888876554443322 23456788884 3456666766677 9999988998877776443
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.08 E-value=0.66 Score=40.59 Aligned_cols=181 Identities=7% Similarity=-0.078 Sum_probs=100.1
Q ss_pred EEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC----CcEEEEEee
Q 020784 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ----SRCIGELSF 174 (321)
Q Consensus 99 ~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~----~~~~~~~~~ 174 (321)
+|+.+..+.|+..+++......... .......+++.+..+.+..+.. ..+.|..+|... ......+..
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~~~ 74 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISR 74 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECS
T ss_pred EEEEECCCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEEC------CCCcEEEEECCCCCCCcccEEEEeC
Confidence 4566666778888887765433322 1344566677776666666653 347899999875 221212221
Q ss_pred C-CceeEEEEe--CCeEEEEE--CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC-CcEEEEeeCC
Q 020784 175 R-SEVRSVKLR--RDRIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-GQVRVEHYAS 248 (321)
Q Consensus 175 ~-~~v~~v~~~--~~~~~~~~--~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d-g~V~i~d~~~ 248 (321)
. ..+..+++. ...++++. .+.|.++++........+......-.-+++.+. ++.++. +.... +.|...++..
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~-~g~ly~-~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPV-HGFMYW-TDWGTPAKIKKGGLNG 152 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETT-TTEEEE-EECSSSCEEEEEETTS
T ss_pred CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCC-CCEEEE-EccCCCCeEEEEcCCC
Confidence 1 345677765 45666664 358999998654332222221111122334332 334443 23333 6777766654
Q ss_pred cceEEee-ccccceeEEEECCCCCEE-EEEeCCCcEEEEEEcCC
Q 020784 249 KRTKFIM-AHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 249 ~~~~~l~-~H~~~V~~vafspdg~~l-as~S~Dgt~IrIWd~~t 290 (321)
.....+. ..-...+.|++++++..| .+-+..+. |..+|+..
T Consensus 153 ~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~-I~~~d~dg 195 (316)
T 1ijq_A 153 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNG 195 (316)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTS
T ss_pred CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe-EEEEecCC
Confidence 4444332 234568899999876554 44445556 99999874
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.03 E-value=0.036 Score=54.73 Aligned_cols=202 Identities=9% Similarity=-0.059 Sum_probs=106.7
Q ss_pred CeEEEEEcCCCCEEEEEcC--CcEEEEEecC----CceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEE
Q 020784 87 TLLHISFNQDHGCFAAGTD--HGFRIYNCDP----FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~--~gv~vw~~~~----~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~i 160 (321)
.+..++|++++..|..... +.|+.++++. ......... .......+++.+....+.++.. ..+.|.+
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-~~~~P~glavD~~~g~LY~tD~------~~~~I~v 479 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDS------VLGTVSV 479 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS-CC--CCCEECCCSSSBCEECCT------TTSCEEE
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC-CCCCcceEEEEeeCCcEEEEec------cCCeEEE
Confidence 4567899987766665543 4477777764 111111100 0011223444444444444332 2478999
Q ss_pred EeCCCCcEEEEEeeC-CceeEEEEeC--CeEEEEE--C-CEEEEEEcCCcEEEEEEe-ccCCCCceEEEeeCCCceEEEe
Q 020784 161 WDDHQSRCIGELSFR-SEVRSVKLRR--DRIIVVL--E-QKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~--~~~~~~~--~-~~I~iwd~~~~~~~~~l~-~~~~~~~~~~~s~~~d~~~la~ 233 (321)
.|+........+... ..+..+++.+ ..++++. . +.|..+++... ....+. .....-.-+++.++....+++
T Consensus 480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY~a- 557 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWV- 557 (699)
T ss_dssp EBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEEEE-
T ss_pred EecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEEEE-
Confidence 998755443333222 3466777765 3344442 1 46777766432 222222 111112235555544333333
Q ss_pred ecCCCCcEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 234 PGLQKGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
-...+.|...++......++.. .......|++..+ .++++....+. |..+|..+|+.+..+..+
T Consensus 558 -D~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~-V~~~d~~~G~~~~~i~~~ 624 (699)
T 1n7d_A 558 -DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA-IFSANRLTGSDVNLLAEN 624 (699)
T ss_dssp -ETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC-EEEEETTTEEEEECCCTT
T ss_pred -ecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe-EEEEEccCCCceEEeecC
Confidence 4556788888876544443322 2344567777654 45566665677 999999999988877543
No 287
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.95 E-value=0.028 Score=55.93 Aligned_cols=99 Identities=9% Similarity=-0.161 Sum_probs=60.5
Q ss_pred EEEeeC-CCceEEEeecCCCC----cEEEEeeCCc-ceEEeeccccceeEEEECCCCCEEEEEeCCC----cEEEEEEcC
Q 020784 220 CAVSQG-VGSLVLVCPGLQKG----QVRVEHYASK-RTKFIMAHDSRIACFALTQDGQLLATSSTKG----TLVRIFNTL 289 (321)
Q Consensus 220 ~~~s~~-~d~~~la~sGs~dg----~V~i~d~~~~-~~~~l~~H~~~V~~vafspdg~~las~S~Dg----t~IrIWd~~ 289 (321)
..+... +|+..||++-+.+| .|+++|+.++ .... ..-......++|+|||+.|+-.+.|. ..|.++++.
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg 255 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG 255 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence 344455 67788887544333 4888998876 5211 00112246789999999888777663 238888998
Q ss_pred CCcE--EEEEeCCCc--ceeEEEeecCceEEEee
Q 020784 290 DGTL--LQEECCPSI--SAQSGLWLSSAWLRVLR 319 (321)
Q Consensus 290 tg~~--i~~~~~g~~--~~~~~~s~d~~~la~~~ 319 (321)
+++. ...+..... .....+|+||++|++..
T Consensus 256 t~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 256 KLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp SCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred CCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 8741 222322222 23347899999998754
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.86 E-value=1 Score=40.95 Aligned_cols=184 Identities=7% Similarity=-0.091 Sum_probs=102.2
Q ss_pred CEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc----EEEEEe
Q 020784 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR----CIGELS 173 (321)
Q Consensus 98 ~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~----~~~~~~ 173 (321)
.+|+.+....|+..+++......... .......+++.+..+.+..+.. ..+.|..+++.... ....+.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEEC
T ss_pred ceeEEeccceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEe
Confidence 35666666778888877654433322 2355667788776777766653 34788888886521 222222
Q ss_pred -eCCceeEEEEe--CCeEEEEEC--CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCC
Q 020784 174 -FRSEVRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS 248 (321)
Q Consensus 174 -~~~~v~~v~~~--~~~~~~~~~--~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~ 248 (321)
.-..+..+++. ...++++.. +.|.+.++........+......-.-+++.+. ++.++.+-....+.|...++..
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~-~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPV-HGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETT-TTEEEEEECSSSCCEEEEETTS
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecc-cCeEEEEeCCCCCEEEEEeCCC
Confidence 12346666665 456666643 58999988755433333322111122344433 2333332112236777777665
Q ss_pred cceEEe-eccccceeEEEECCCCCEEEEE-eCCCcEEEEEEcCCC
Q 020784 249 KRTKFI-MAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDG 291 (321)
Q Consensus 249 ~~~~~l-~~H~~~V~~vafspdg~~las~-S~Dgt~IrIWd~~tg 291 (321)
.....+ ...-...+.|++++++..|.-+ +..+. |..+|+...
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~-I~~~d~dG~ 278 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGG 278 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSC
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE-EEEEeCCCC
Confidence 444433 3334678999999876655444 44556 999998644
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.85 E-value=1.7 Score=43.40 Aligned_cols=204 Identities=7% Similarity=-0.091 Sum_probs=110.5
Q ss_pred CCeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCc----eeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEE
Q 020784 86 PTLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFR----EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 86 ~~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~----~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~ 159 (321)
..+..++|++.+..|. +-.. +.|+.++++... ....... .......+++.+.++.|.++.. ..+.|.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~-~l~~P~GLAvD~~~~~LY~tD~------~~~~I~ 496 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDS------VLGTVS 496 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEE
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec-CCCCcceeeeeecCCcEEEEec------CCCeEE
Confidence 3567888988554444 4333 446666665321 1111110 1123445677776666666553 247899
Q ss_pred EEeCCCCcEEEEEeeC-CceeEEEEeCC--eEEEEEC---CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEe
Q 020784 160 IWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVLE---QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (321)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~~~~~~~---~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~ 233 (321)
+.|++.......+... ..+..|++++. .++.+.. ..|...++........+......-.-+++.+.. +.+..
T Consensus 497 v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~-~~LYw- 574 (791)
T 3m0c_C 497 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLS-GRLYW- 574 (791)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTT-TEEEE-
T ss_pred EEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCC-CeEEE-
Confidence 9998755433333222 35788888763 5666542 578888886544332333221111234444433 23333
Q ss_pred ecCCCCcEEEEeeCCcceEEe-ec--cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 234 PGLQKGQVRVEHYASKRTKFI-MA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~~~~l-~~--H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
+-...+.|...++......++ .. .-.....|++.. +.++++-...+. |...|..+|+.+..+..+
T Consensus 575 aD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~-I~~~dk~tG~~~~~l~~~ 642 (791)
T 3m0c_C 575 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEA-IFSANRLTGSDVNLLAEN 642 (791)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTE-EEEEETTTCCCCEEEECS
T ss_pred EeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCE-EEEEeCCCCcceEEeecC
Confidence 245556788887766554433 22 233456777754 355555555566 888888888777666443
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.67 E-value=1 Score=39.57 Aligned_cols=202 Identities=9% Similarity=-0.066 Sum_probs=110.6
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CcEEEEEecCCce-eEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFRE-IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 87 ~V~~v~fs~dg~~la-sg~~-~gv~vw~~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
.+..++|++.+..|. +-.. +.|..++.+.... ...... .-.....+++.+....+.++.. ..+.|.+.|.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~-~l~~p~glavd~~~g~ly~~d~------~~~~I~~~~~ 108 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDS------ETNRIEVSNL 108 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE-CCSCCCEEEEETTTTEEEEEET------TTTEEEEEET
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC-CCCCccEEEEEcCCCeEEEEEC------CCCEEEEEEC
Confidence 466889998655444 4433 4466777655421 111110 0123345566665555555542 2478999998
Q ss_pred CCCcEEEEE-eeCCceeEEEEeC--CeEEEEE---CCEEEEEEcCCcEEEEEEe-ccCCCCceEEEeeCCCceEEEeecC
Q 020784 164 HQSRCIGEL-SFRSEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 164 ~~~~~~~~~-~~~~~v~~v~~~~--~~~~~~~---~~~I~iwd~~~~~~~~~l~-~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
+.......+ ..-..+..+++++ ..++.+. ...|..+++.... ...+. .....-.-++++++.+ .+.. +-.
T Consensus 109 dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~-~lY~-aD~ 185 (318)
T 3sov_A 109 DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQ-KLYW-ADA 185 (318)
T ss_dssp TSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTT-EEEE-EET
T ss_pred CCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCC-EEEE-EEC
Confidence 654322222 2223577888875 3555554 2478888875322 22232 2111112344444332 3333 356
Q ss_pred CCCcEEEEeeCCcceEEe-eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 237 QKGQVRVEHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~~l-~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
..+.|...++......++ .+.......|++.. +.++.+-...+. |..+|..+|+....+..+
T Consensus 186 ~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~-V~~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 186 KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHS-ILACNKYTGEGLREIHSD 248 (318)
T ss_dssp TTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEEECC
T ss_pred CCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCe-EEEEECCCCCceEEEeCC
Confidence 667888888765444433 33456678888864 455566555666 999999888876666544
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.60 E-value=0.23 Score=45.91 Aligned_cols=136 Identities=13% Similarity=0.117 Sum_probs=77.7
Q ss_pred ceeEEEEeC----CeEEEEEC-CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC---Cc-EEEEeeC
Q 020784 177 EVRSVKLRR----DRIIVVLE-QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK---GQ-VRVEHYA 247 (321)
Q Consensus 177 ~v~~v~~~~----~~~~~~~~-~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d---g~-V~i~d~~ 247 (321)
.+..+++++ ..++++.. +.|+.+|..+++...... . ......+..++++.++++ ...+ .. +...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~--~~~P~giavd~dG~lyVa-d~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-N--IGQCADVNFTLNGDMVVV-DDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-C--CSCEEEEEECTTCCEEEE-ECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-C--CCCccEEEECCCCCEEEE-cCCCCcccceEEEEECC
Confidence 466888886 45666643 789999997776543322 1 122344444555554442 2211 11 2222221
Q ss_pred Ccce--EEeeccccceeEEEECC-CCCEEEEEeCCCcEEEEEEcCCCcEEEEE-eCCCcc--eeEEEeecCceEEEe
Q 020784 248 SKRT--KFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEE-CCPSIS--AQSGLWLSSAWLRVL 318 (321)
Q Consensus 248 ~~~~--~~l~~H~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~~tg~~i~~~-~~g~~~--~~~~~s~d~~~la~~ 318 (321)
.... ..+. .-.....++++| +|.++++-..++. |+.+|..+|+....+ ..+... ..+++++++.+|.++
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~-V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAM-ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSE-EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCE-EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 1111 1222 345578899999 7887776666677 999999988873333 333322 247888888876664
No 292
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.59 E-value=0.068 Score=56.20 Aligned_cols=172 Identities=13% Similarity=0.188 Sum_probs=113.2
Q ss_pred CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeCCceeEEEE-e
Q 020784 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKL-R 184 (321)
Q Consensus 106 ~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~-~ 184 (321)
..|.|-|+.......++.. .. ...-++|..+.+|+-.| +++.|+|+++...+..+.+...|.-..| +
T Consensus 48 ~~vvIidl~~~~~~~rrpi--~A--dsAIMnP~~~iiALrag--------~~lQiFnl~~k~klks~~~~e~VvfWkWis 115 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRPI--SA--DSAIMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 115 (1630)
T ss_pred ceEEEEECCCCCCcccccc--cc--hhhccCCCcceEEEecC--------CeEEEeehHHhhhhcccccCCCceEEEecC
Confidence 4588999987665544443 11 12235677777777652 7899999999999988888888877777 4
Q ss_pred CCeEEEEECCEEEEEEcCC-cEEEEEEeccCC--CCceEEEeeCCCceEEEeecC------CCCcEEEEeeCCcceEEee
Q 020784 185 RDRIIVVLEQKIFVYNFAD-LKLLHQIETIAN--PKGLCAVSQGVGSLVLVCPGL------QKGQVRVEHYASKRTKFIM 255 (321)
Q Consensus 185 ~~~~~~~~~~~I~iwd~~~-~~~~~~l~~~~~--~~~~~~~s~~~d~~~la~sGs------~dg~V~i~d~~~~~~~~l~ 255 (321)
++.+.++++..|.-|++.. ...++.|+.|.. ...++.+..+++..+++..|- ..|.+.++....+....+.
T Consensus 116 ~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ie 195 (1630)
T 1xi4_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (1630)
T ss_pred CCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhh
Confidence 6778889999999999963 344455554432 244667777778777776553 4677788877666556677
Q ss_pred ccccceeEEEECC--C-CCEEEEEeC---CCcEEEEEEcCC
Q 020784 256 AHDSRIACFALTQ--D-GQLLATSST---KGTLVRIFNTLD 290 (321)
Q Consensus 256 ~H~~~V~~vafsp--d-g~~las~S~---Dgt~IrIWd~~t 290 (321)
||-..-..+.+.. . ..+|+-+.. .++ ++|-++..
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k-Lhi~Ei~~ 235 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGT 235 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCce-EEEEecCC
Confidence 7766554444431 1 223332221 145 88888754
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.46 E-value=1.2 Score=39.05 Aligned_cols=183 Identities=7% Similarity=-0.033 Sum_probs=95.9
Q ss_pred EEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEE-EEEee-CC
Q 020784 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI-GELSF-RS 176 (321)
Q Consensus 99 ~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~-~~~~~-~~ 176 (321)
+|+.+....|+.++++............-.....+++....+.+..+.. ..+.|..++...+... ..+.. -.
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~------~~~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET------TTTEEEEEETTSSSCCCEEEEECCS
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC------CCCcEEEEEccCCCceEEEEcCCCC
Confidence 4555555678888887653111111100123445666666666666652 3478999998765321 11111 12
Q ss_pred ceeEEEEe--CCeEEEEE--CCEEEEEEcCCcEEEEEEe-ccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcce
Q 020784 177 EVRSVKLR--RDRIIVVL--EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (321)
Q Consensus 177 ~v~~v~~~--~~~~~~~~--~~~I~iwd~~~~~~~~~l~-~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~ 251 (321)
.+..+++. ...++.+. .+.|.++++..... ..+. .....-.-+++.+.. +.+..+--...+.|...++.....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~-g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSS-GFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGG-TEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCC-CEEEEEecCCCCEEEEEEcCCCCe
Confidence 45566665 45566664 35899999864322 2232 211111223444322 333332112346677666654443
Q ss_pred EEe-eccccceeEEEECCCCCEE-EEEeCCCcEEEEEEcCC
Q 020784 252 KFI-MAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 252 ~~l-~~H~~~V~~vafspdg~~l-as~S~Dgt~IrIWd~~t 290 (321)
..+ ..--...+.|+|++++..| .+=+..+. |..+|+..
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~-I~~~d~dG 197 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDG 197 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTS
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCE-EEEEcCCC
Confidence 333 2233457899999865544 44444555 99999864
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.38 E-value=0.77 Score=43.15 Aligned_cols=140 Identities=11% Similarity=0.123 Sum_probs=79.3
Q ss_pred ceeEEEEeC---CeEEEEEC--CEEEEEEcCCcEEEEEEeccC-CCCceEEEee-------CCCceEEEeecCCCCc---
Q 020784 177 EVRSVKLRR---DRIIVVLE--QKIFVYNFADLKLLHQIETIA-NPKGLCAVSQ-------GVGSLVLVCPGLQKGQ--- 240 (321)
Q Consensus 177 ~v~~v~~~~---~~~~~~~~--~~I~iwd~~~~~~~~~l~~~~-~~~~~~~~s~-------~~d~~~la~sGs~dg~--- 240 (321)
....+++.+ +.++++.. +.|++.|+.++.+...+.... .......+.. +.++..|.++...++.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356788886 35777754 478889988776654443322 1123444555 5455533322333322
Q ss_pred ---EEEEeeCC-cce------EEeeccccceeEEEECC-CCCEEEEEeCCCcEEEEEEcC-------CCcE---------
Q 020784 241 ---VRVEHYAS-KRT------KFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTL-------DGTL--------- 293 (321)
Q Consensus 241 ---V~i~d~~~-~~~------~~l~~H~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~~-------tg~~--------- 293 (321)
|.+.+... +.. ..+... .....++++| ++.++++-..++. |..+|+. +++.
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~-V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQ-VFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTE-EEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCE-EEEEecccccccccCceeecccccccc
Confidence 44443222 111 222222 3467889999 5677777777777 9999998 6664
Q ss_pred --EEE-EeCC--CcceeEEEeecCceEEEe
Q 020784 294 --LQE-ECCP--SISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 294 --i~~-~~~g--~~~~~~~~s~d~~~la~~ 318 (321)
+.. +..+ .....++++++|.+|.++
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEE
Confidence 222 2222 334577889999865554
No 295
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.33 E-value=3.3 Score=43.21 Aligned_cols=149 Identities=11% Similarity=0.088 Sum_probs=89.5
Q ss_pred CCcEEEEeCCCCcEEEEEeeC--CceeEEEEeCCeEEEEECCEEEEEEcCCcEEEE--EEeccCCCCceEEEeeCCC---
Q 020784 155 LNKVMIWDDHQSRCIGELSFR--SEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLH--QIETIANPKGLCAVSQGVG--- 227 (321)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~--~~v~~v~~~~~~~~~~~~~~I~iwd~~~~~~~~--~l~~~~~~~~~~~~s~~~d--- 227 (321)
.+.|++.+...+..+.+.... ..|...+.+...++++.++.+.++++..+++.. +... ...+.++++.+.++
T Consensus 491 ~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~g~~l~~fel~~~~L~~~~~~~l-~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 491 SASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEM-EHEVACLDITPLGDSNG 569 (1158)
T ss_dssp SSCEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEETTEEEEEEEETTEEEEEEEEEC-SSCEEEEECCCCSSSTT
T ss_pred cCEEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEECCEEEEEEeeCCceeeecccCC-CCceEEEEeecCCCCcc
Confidence 477999988766666666644 368888888888888877788888886654322 2221 23344445544332
Q ss_pred -ceEEEeecCC-CCcEEEEeeCCcceEEeecc--ccceeEEEEC--CCCCEEEEEeCCCcEEEEE--EcCCCcEEEE--E
Q 020784 228 -SLVLVCPGLQ-KGQVRVEHYASKRTKFIMAH--DSRIACFALT--QDGQLLATSSTKGTLVRIF--NTLDGTLLQE--E 297 (321)
Q Consensus 228 -~~~la~sGs~-dg~V~i~d~~~~~~~~l~~H--~~~V~~vafs--pdg~~las~S~Dgt~IrIW--d~~tg~~i~~--~ 297 (321)
..++|+ |.. |++|+|+.+..-.......- ...+++|++. ....+|..|-.||. +--+ |..+|++..+ .
T Consensus 570 ~s~~~aV-g~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~-l~~~~~d~~tg~l~d~r~~ 647 (1158)
T 3ei3_A 570 LSPLCAI-GLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGA-LFYFGLNIETGLLSDRKKV 647 (1158)
T ss_dssp CCSEEEE-EETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSE-EEEEEECTTTCCEEEEEEE
T ss_pred cccEEEE-EECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCe-EEEEEEcCCCCccccceeE
Confidence 356775 764 99999998865332221111 2345565554 23457888888998 4334 4456776533 3
Q ss_pred eCCCcceeE
Q 020784 298 CCPSISAQS 306 (321)
Q Consensus 298 ~~g~~~~~~ 306 (321)
.-|.....+
T Consensus 648 ~LG~~pv~L 656 (1158)
T 3ei3_A 648 TLGTQPTVL 656 (1158)
T ss_dssp ECCSSCCEE
T ss_pred EcCCCceEE
Confidence 455554444
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.95 E-value=0.084 Score=52.08 Aligned_cols=179 Identities=8% Similarity=-0.060 Sum_probs=89.7
Q ss_pred EEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC----CcEEEEEee-
Q 020784 100 FAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ----SRCIGELSF- 174 (321)
Q Consensus 100 lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~----~~~~~~~~~- 174 (321)
|+....+.|++.+++......... .......+++.+..+.+.++.. ..+.|+.+++.. ......+..
T Consensus 380 ll~~~~~~I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~------~~~~I~~~~~~g~~~~~~~~~~i~~~ 451 (699)
T 1n7d_A 380 LFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRD 451 (699)
T ss_dssp BCCCCTTC-CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCT------TTTSBEEEESCCCCC-CCCCCBCCSC
T ss_pred EEecCccceEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEec------CCCeEEEEecCCCCCCcceEEEEeCC
Confidence 333344566666666544321111 1233445566666666655542 347888888875 111111111
Q ss_pred CCceeEEEEe--CCeEEEEE--CCEEEEEEcCCcEEEEEEecc-CCCCceEEEeeCCCceEEEeecCC-CCcEEEEeeCC
Q 020784 175 RSEVRSVKLR--RDRIIVVL--EQKIFVYNFADLKLLHQIETI-ANPKGLCAVSQGVGSLVLVCPGLQ-KGQVRVEHYAS 248 (321)
Q Consensus 175 ~~~v~~v~~~--~~~~~~~~--~~~I~iwd~~~~~~~~~l~~~-~~~~~~~~~s~~~d~~~la~sGs~-dg~V~i~d~~~ 248 (321)
-..+..+++. ...++++. .+.|.++++........+... ..+ .-+++.+.. +.++. +... .+.|...++..
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P-~giavDp~~-g~ly~-td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKP-RAIVVDPVH-GFMYW-TDWGTPAKIKKGGLNG 528 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCC-CCEECCSSS-SCCEE-CCCSSSCCEEBCCSSS
T ss_pred CCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCc-ceEEEccCC-CcEEE-cccCCCCeEEEEeCCC
Confidence 1134455554 44565553 358999998654432222221 122 223444332 23333 2322 25677666544
Q ss_pred cceEEe-eccccceeEEEECCCC-CEEEEEeCCCcEEEEEEcCC
Q 020784 249 KRTKFI-MAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 249 ~~~~~l-~~H~~~V~~vafspdg-~~las~S~Dgt~IrIWd~~t 290 (321)
....++ ...-...+.|+|+|++ +++++-+..+. |.++++..
T Consensus 529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~-I~~~d~dG 571 (699)
T 1n7d_A 529 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNG 571 (699)
T ss_dssp CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE-EEEECSSS
T ss_pred CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe-EEEEccCC
Confidence 333333 2223457899999875 55555555666 99999864
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.95 E-value=2.9 Score=40.49 Aligned_cols=201 Identities=7% Similarity=-0.081 Sum_probs=113.2
Q ss_pred CeEEEEEcCCCCEEEEE-cC-CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 87 TLLHISFNQDHGCFAAG-TD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg-~~-~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
.+..++|++++..|... .. +.|..++++.......... .......+++.+.+..+..+.. ..+.|.+.|++
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~-g~~~P~GlAvD~~~~~LY~tD~------~~~~I~v~~~d 110 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF-GLDYPEGMAVDWLGKNLYWADT------GTNRIEVSKLD 110 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEEEEETT
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC-CCCCcceEEEEeCCCEEEEEEC------CCCEEEEEecC
Confidence 57899999876655544 33 4466666654333222221 1123445667666665655543 24788888886
Q ss_pred CCcEEEEE-eeCCceeEEEEeC--CeEEEEE---CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC
Q 020784 165 QSRCIGEL-SFRSEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (321)
Q Consensus 165 ~~~~~~~~-~~~~~v~~v~~~~--~~~~~~~---~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d 238 (321)
.......+ ..-..+..+++++ ..++.+. ...|...++........+... ..-..+..+.++..|.++-...
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~---~~P~GlalD~~~~~LY~aD~~~ 187 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNV---GRANGLTIDYAKRRLYWTDLDT 187 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSC---SSEEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCC---CCcceEEEccccCEEEEEECCC
Confidence 54322222 1223578889885 3455554 247877777543322222221 1223333343322222235566
Q ss_pred CcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC
Q 020784 239 GQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 239 g~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~ 299 (321)
+.|...++.......+...-.....|++.. +.++.|-...+. |...|..+|+....+..
T Consensus 188 ~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~-I~~~dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 188 NLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRS-IERANKTSGQNRTIIQG 246 (628)
T ss_dssp TEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEEEC
T ss_pred CEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCE-EEEEECCCCCceEEEec
Confidence 788888876544445555555677898876 566666655666 99999888876555543
No 298
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.35 E-value=4.3 Score=39.86 Aligned_cols=192 Identities=13% Similarity=0.166 Sum_probs=107.4
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEe-eeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRR-DFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~-~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
.+.|+||.-..+|.+- .|..+|+..||-...+..... .. ....|..+....++ .+.+++ ++.+..+|.
T Consensus 21 ~n~V~~I~qD~~G~lW-igT~~GL~ryDG~~~~~~~~~~~~-~~~~i~~i~~d~~g-~lWigT--------~~Gl~~yd~ 89 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIW-IGSNKGLFSYDGYSTQQHFTYGEN-NNTRIYCGVIIDNT-YLYMGT--------DNGILVYNY 89 (758)
T ss_dssp CCCEEEEEECTTSCEE-EEESSCEEEECSSCEEECSCTTST-TSSCEEEEEEETTT-EEEEEE--------TTEEEEEET
T ss_pred cceEEEEEECCCCCEE-EEECCCccccCCCceEEEEccCCC-CCceEEEEEEcCCC-cEEEEe--------CCCeEEEeC
Confidence 4679999999999744 345778777763222110000 00 12345554443333 444444 245889998
Q ss_pred CCCcEEEEEe-eCCceeEEEEeCCeEEEEECCEEEEEEcCCcEEEEEEec---cCCCCceEEEeeCCCceEEEeecCCCC
Q 020784 164 HQSRCIGELS-FRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIET---IANPKGLCAVSQGVGSLVLVCPGLQKG 239 (321)
Q Consensus 164 ~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~I~iwd~~~~~~~~~l~~---~~~~~~~~~~s~~~d~~~la~sGs~dg 239 (321)
.+.+...... ....|.++......+.+++.+.+..||..+++. ..+.. ......+.++..+.++.+.+ |+.+|
T Consensus 90 ~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi--gt~~G 166 (758)
T 3ott_A 90 RADRYEQPETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKL-TSFDTRRNGLPNNTIYSIIRTKDNQIYV--GTYNG 166 (758)
T ss_dssp TTTEECCCSCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCE-EEECHHHHCCSCSCEEEEEECTTCCEEE--EETTE
T ss_pred CCCEEECcccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeE-EEeccCCCCcCCCeEEEEEEcCCCCEEE--EeCCC
Confidence 7764322100 122466666667788899888899999876554 33311 11123355666666666665 34455
Q ss_pred cEEEEeeCCcceEEeec--c----ccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 240 QVRVEHYASKRTKFIMA--H----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 240 ~V~i~d~~~~~~~~l~~--H----~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
+..++...+....+.. . ...|+++....++..|-.|. ++. +..+|..+++.
T Consensus 167 -l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt-~~G-l~~~~~~~~~~ 223 (758)
T 3ott_A 167 -LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT-EGY-LFQYFPSTGQI 223 (758)
T ss_dssp -EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE-EEE-EEEEETTTTEE
T ss_pred -HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE-CCC-CeEEcCCCCeE
Confidence 4445554444332221 1 23488998888766433344 346 77899887754
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.17 E-value=0.5 Score=43.47 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=66.8
Q ss_pred EEeCCeEEEEECCEEEEEEcCCcEEEEEEeccC--CCCceEEEeeCCCceEEEeecCCCCcEEEEeeC----C-------
Q 020784 182 KLRRDRIIVVLEQKIFVYNFADLKLLHQIETIA--NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA----S------- 248 (321)
Q Consensus 182 ~~~~~~~~~~~~~~I~iwd~~~~~~~~~l~~~~--~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~----~------- 248 (321)
+-+...++++.++.||.-++.....-+.++... ....+.-+..+++|.+||+.|.. .|.|-.+- .
T Consensus 29 ~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~--~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN--EIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS--EEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC--eEEEEEecCccccCcccccc
Confidence 334567888889999998887443344555431 11122234445566899986554 56663332 1
Q ss_pred cc--eEEeec------cccceeEEEECCCC---CEEEEEeCCCcEEEEEEcCC
Q 020784 249 KR--TKFIMA------HDSRIACFALTQDG---QLLATSSTKGTLVRIFNTLD 290 (321)
Q Consensus 249 ~~--~~~l~~------H~~~V~~vafspdg---~~las~S~Dgt~IrIWd~~t 290 (321)
.. .+.+.- ...+|..+.|+|-| ..|++--.|++ ||+||+..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~ 158 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILN 158 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTC
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEccc
Confidence 01 122222 24679999999964 57888888999 99999986
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.95 E-value=4.2 Score=38.16 Aligned_cols=200 Identities=8% Similarity=-0.051 Sum_probs=106.1
Q ss_pred CCeEEEEE-------cCCCCEEEEEcCCc--------EEEEEecC-Cce------eEEeeeecCCceEEEEEecCCCeEE
Q 020784 86 PTLLHISF-------NQDHGCFAAGTDHG--------FRIYNCDP-FRE------IFRRDFERGGGIGVVEMLFRCNILA 143 (321)
Q Consensus 86 ~~V~~v~f-------s~dg~~lasg~~~g--------v~vw~~~~-~~~------~~~~~~~~~~~v~~v~~~~~~~~~~ 143 (321)
+....++| +++|++|..+...+ |.+++... ++. .....+ .+.. .+++.++...|.
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~--~~p~-giavdp~~g~LY 262 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY--KQCN-GATIHPINGELY 262 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE--SCCC-CEEECTTTCCEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC--CCce-EEEEcCCCCeEE
Confidence 36899999 99999666665432 33444333 111 011122 2222 335566444555
Q ss_pred EEeCCCCCCCCCCcEEEEeCC-------CCcE-----------EEE-Eee--CCceeEEEEeCCe--EEEEEC--CEEEE
Q 020784 144 LVGGGPDPQYPLNKVMIWDDH-------QSRC-----------IGE-LSF--RSEVRSVKLRRDR--IIVVLE--QKIFV 198 (321)
Q Consensus 144 ~~sg~~~~~~~d~~v~iWD~~-------~~~~-----------~~~-~~~--~~~v~~v~~~~~~--~~~~~~--~~I~i 198 (321)
++.. ..+.|..+|++ ++.. ... +.. ....+.++|+++. ++++-. ..|+.
T Consensus 263 vtd~------~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 263 FNSY------EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp EEET------TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEC------CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 5442 34789999987 4543 112 222 2346789998764 566643 58888
Q ss_pred EEc--CCcEEE--EEEecc---C-------------CCCceEEEeeC-----CCceEEEeecCCCCcEEEEeeCCcceEE
Q 020784 199 YNF--ADLKLL--HQIETI---A-------------NPKGLCAVSQG-----VGSLVLVCPGLQKGQVRVEHYASKRTKF 253 (321)
Q Consensus 199 wd~--~~~~~~--~~l~~~---~-------------~~~~~~~~s~~-----~d~~~la~sGs~dg~V~i~d~~~~~~~~ 253 (321)
++. ..+.+. .++.+. . .|...+++... .++.+.+ +-..+..|+.++. .+.+.+
T Consensus 337 id~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyV-aD~~N~rIr~i~~-~G~v~T 414 (496)
T 3kya_A 337 SDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYF-VDRLNFCVRKVTP-EGIVST 414 (496)
T ss_dssp EEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEE-EEGGGTEEEEECT-TCBEEE
T ss_pred EecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEE-EECCCCEEEEEeC-CCCEEE
Confidence 655 333321 233221 0 11112222210 2344444 2566678888773 445555
Q ss_pred eecc------------------------ccceeEEEECCC-CCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 020784 254 IMAH------------------------DSRIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEE 297 (321)
Q Consensus 254 l~~H------------------------~~~V~~vafspd-g~~las~S~Dgt~IrIWd~~tg~~i~~~ 297 (321)
+-+. -.....|+++++ |.++++=+.... ||.+++....+++..
T Consensus 415 iaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~r-Irki~~~~~~~~~~~ 482 (496)
T 3kya_A 415 YAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHT-IRTISMEQEENVAGD 482 (496)
T ss_dssp EEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTE-EEEEEECCCC-----
T ss_pred EecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCE-EEEEECCCCcccccC
Confidence 5432 124788999997 776665555555 999999988777654
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.58 E-value=5.5 Score=38.39 Aligned_cols=200 Identities=10% Similarity=-0.074 Sum_probs=105.5
Q ss_pred CeEEEEEcCCCCEEEEEcC--CcEEEEEecCCce-eEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC
Q 020784 87 TLLHISFNQDHGCFAAGTD--HGFRIYNCDPFRE-IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~--~gv~vw~~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~ 163 (321)
....++|++.+..|....- +.|..++++.... ...... .-.....+++.+.++.+.++.. ..+.|.+.|.
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~-~~~~P~GlAvD~~~~~ly~~d~------~~~~I~v~~~ 113 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDS------ETNRIEVSNL 113 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECS-SCSCEEEEEEETTTTEEEEEET------TTTEEEEEET
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeC-CCCCcCeEEEEecCCEEEEEeC------CCCEEEEEEC
Confidence 5788999987666655443 3465666654321 111111 1135567788876666666553 3478999998
Q ss_pred CCCcEEEEEe-eCCceeEEEEeCC--eEEEEE---CCEEEEEEcCCcEEEEEEe-ccCCCCceEEEeeCCCceEEEeecC
Q 020784 164 HQSRCIGELS-FRSEVRSVKLRRD--RIIVVL---EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 164 ~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~~---~~~I~iwd~~~~~~~~~l~-~~~~~~~~~~~s~~~d~~~la~sGs 236 (321)
+.......+. .-..+..+++++. .++.+. ...|...++..... ..+. .....-.-+++.+.. +.+.. +-.
T Consensus 114 dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~~P~Glald~~~-~~LY~-aD~ 190 (619)
T 3s94_A 114 DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEE-QKLYW-ADA 190 (619)
T ss_dssp TSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSSEEEEEEETTT-TEEEE-EET
T ss_pred CCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEeCCCCCCcEEEEEccC-CEEEE-EeC
Confidence 7544322221 2235778888763 455553 23666666653222 2222 111111223444332 33333 345
Q ss_pred CCCcEEEEeeCCcceEEe-eccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 237 QKGQVRVEHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 237 ~dg~V~i~d~~~~~~~~l-~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
..+.|...++.......+ .+.......|++..+ .++.|-...+. |...|..+|+....+.
T Consensus 191 ~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~-V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 191 KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHS-ILACNKYTGEGLREIH 251 (619)
T ss_dssp TTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCS-EEEEESSSCCCCEECC
T ss_pred CCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCE-EEEEECCCCcccEEEe
Confidence 566787777765443322 223344578888766 55555555677 9999998887655543
No 302
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.47 E-value=3.2 Score=35.27 Aligned_cols=175 Identities=13% Similarity=0.108 Sum_probs=101.0
Q ss_pred CceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeC--CceeEEEEeCC-eEEEEEC--CEEEEEEcC
Q 020784 128 GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR--SEVRSVKLRRD-RIIVVLE--QKIFVYNFA 202 (321)
Q Consensus 128 ~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~--~~v~~v~~~~~-~~~~~~~--~~I~iwd~~ 202 (321)
+.+..+++.++++.+.++... ++.|...|.. ++.+..+.+. ...-.+++.++ .++++.+ +.+.++++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET------TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred cCcceeEEeCCCCEEEEEECC------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 457888888887777776643 5788899988 8888887665 36777787665 4445543 588888875
Q ss_pred CcE---EEEEEecc----CCCCc--eEEEeeCCCceEEEeecCCCCcEEEEeeC----CcceEEee-------cccccee
Q 020784 203 DLK---LLHQIETI----ANPKG--LCAVSQGVGSLVLVCPGLQKGQVRVEHYA----SKRTKFIM-------AHDSRIA 262 (321)
Q Consensus 203 ~~~---~~~~l~~~----~~~~~--~~~~s~~~d~~~la~sGs~dg~V~i~d~~----~~~~~~l~-------~H~~~V~ 262 (321)
... .+...... ....+ -+++.+..+ .++++ .......||.+. ...+..+. .+...+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va--~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFF--KEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEE--EESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCC-EEEEE--ECcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 432 23333321 11122 344444432 34432 333344454432 11223221 1345689
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe--CCC--------cceeEEEeecCc
Q 020784 263 CFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC--CPS--------ISAQSGLWLSSA 313 (321)
Q Consensus 263 ~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~--~g~--------~~~~~~~s~d~~ 313 (321)
.|+|+|....|..-|.....+-++|.. |+.+..+. .+. +.-.+++..+|.
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 999998755554555555558899965 66665543 332 234567777775
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.08 E-value=5.3 Score=36.71 Aligned_cols=104 Identities=18% Similarity=0.140 Sum_probs=66.7
Q ss_pred EEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeec---CCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc-
Q 020784 92 SFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFER---GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR- 167 (321)
Q Consensus 92 ~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~---~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~- 167 (321)
....+|+-|+.+-++.+|.-++.+...-......+ -+.+..+.++++++++|+.+ +++|.|-.+-.+.
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g--------~~~V~Vv~LP~~~~ 98 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN--------DNEIFVMEVPWGYS 98 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC--------SSEEEEEECCTTCS
T ss_pred EEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec--------CCeEEEEEecCccc
Confidence 34467777777777778877766433211222200 23567788999999999987 5788888765221
Q ss_pred -----------EEEEEee-------CCceeEEEEeCC-----eEEEEEC-CEEEEEEcCC
Q 020784 168 -----------CIGELSF-------RSEVRSVKLRRD-----RIIVVLE-QKIFVYNFAD 203 (321)
Q Consensus 168 -----------~~~~~~~-------~~~v~~v~~~~~-----~~~~~~~-~~I~iwd~~~ 203 (321)
....+.. ...|..+.|||- .+++.++ +.||+||+..
T Consensus 99 ~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 99 NVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1223332 246999999984 3555554 6999999964
No 304
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.95 E-value=1.7 Score=46.05 Aligned_cols=195 Identities=11% Similarity=0.157 Sum_probs=108.4
Q ss_pred EEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCC-cEE
Q 020784 91 ISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS-RCI 169 (321)
Q Consensus 91 v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~-~~~ 169 (321)
.-.+|..+.||-=....+.|||+++...+....+ ...|....|. +.+.+++++ +..|..|++... ..+
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k~klks~~~--~e~VvfWkWi-s~~~l~lVT--------~~aVyHW~~~~~s~P~ 139 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM--TDDVTFWKWI-SLNTVALVT--------DNAVYHWSMEGESQPV 139 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHhhhhccccc--CCCceEEEec-CCCeeEEEc--------CCeEEEeccCCCCccH
Confidence 3456667777766667789999988776655555 4556665654 456777776 478999998642 233
Q ss_pred EEEeeC-----CceeEEEEeCC--eEEEEE--------CCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCC-CceEEEe
Q 020784 170 GELSFR-----SEVRSVKLRRD--RIIVVL--------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGV-GSLVLVC 233 (321)
Q Consensus 170 ~~~~~~-----~~v~~v~~~~~--~~~~~~--------~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~-d~~~la~ 233 (321)
..|..+ ..|.+...+++ .+++++ .|.+.+|....... +.+++|........+...+ ...++++
T Consensus 140 k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEE
Confidence 233322 24555555554 333321 26888998865332 3445554322221111111 1123332
Q ss_pred e--cCCCCcEEEEeeCCc----ceE------E-ee--ccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEe
Q 020784 234 P--GLQKGQVRVEHYASK----RTK------F-IM--AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 234 s--Gs~dg~V~i~d~~~~----~~~------~-l~--~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~ 298 (321)
. ....|++.|.++... +.. . +. +-..-..++..|+....+-....-|. |.++|+.||.++..-+
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~-~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce-EEEEecccchhhhhcc
Confidence 1 112357777665321 110 1 11 11233566777777666666667787 9999999999886543
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.84 E-value=7.2 Score=37.65 Aligned_cols=186 Identities=7% Similarity=-0.055 Sum_probs=104.0
Q ss_pred EEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeC-Cc
Q 020784 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR-SE 177 (321)
Q Consensus 99 ~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~-~~ 177 (321)
+|+.+....|+..+++............-.....+++.+..+.+..+.. ..+.|..++++.......+... ..
T Consensus 8 ~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~~~ 81 (628)
T 4a0p_A 8 FLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGLDY 81 (628)
T ss_dssp EEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSCSC
T ss_pred EEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCCCC
Confidence 5555566778888887655433332211134556777777777766653 3578998988755433333322 24
Q ss_pred eeEEEEe--CCeEEEEEC--CEEEEEEcCCcEEEEEEeccCCCCceEEEeeCC-CceEEEeecCCCCcEEEEeeCCcceE
Q 020784 178 VRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGV-GSLVLVCPGLQKGQVRVEHYASKRTK 252 (321)
Q Consensus 178 v~~v~~~--~~~~~~~~~--~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~-d~~~la~sGs~dg~V~i~d~~~~~~~ 252 (321)
+..+++. ...++.+.. +.|.+.++..... ..+... .-..-..+..++ .+.+..+--+..+.|...++......
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~-~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWK-DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECS-SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeC-CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 5566664 466777643 5899998864322 222211 111123333343 33444321122456666666555444
Q ss_pred EeeccccceeEEEECCCCCEEEEE-eCCCcEEEEEEcCCCcE
Q 020784 253 FIMAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDGTL 293 (321)
Q Consensus 253 ~l~~H~~~V~~vafspdg~~las~-S~Dgt~IrIWd~~tg~~ 293 (321)
.+-..-...+.|++++++..|.-+ ...+. |..+|+..+..
T Consensus 160 ~l~~~~~~P~GlalD~~~~~LY~aD~~~~~-I~~~d~dG~~~ 200 (628)
T 4a0p_A 160 TLVPNVGRANGLTIDYAKRRLYWTDLDTNL-IESSNMLGLNR 200 (628)
T ss_dssp EEECSCSSEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSC
T ss_pred EEECCCCCcceEEEccccCEEEEEECCCCE-EEEEcCCCCce
Confidence 444455678999999976555444 44555 99999875433
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.59 E-value=5.4 Score=35.60 Aligned_cols=157 Identities=10% Similarity=0.086 Sum_probs=83.6
Q ss_pred CCCcEEEEeCCCCc-EEEEEeeC--------CceeEEEEeCC-----eEEEEE----CCEEEEEEcCC--c--EEEEEEe
Q 020784 154 PLNKVMIWDDHQSR-CIGELSFR--------SEVRSVKLRRD-----RIIVVL----EQKIFVYNFAD--L--KLLHQIE 211 (321)
Q Consensus 154 ~d~~v~iWD~~~~~-~~~~~~~~--------~~v~~v~~~~~-----~~~~~~----~~~I~iwd~~~--~--~~~~~l~ 211 (321)
.+|.|.++|.++.. ....+... ..+..+.+..+ .++++. +.+|.+|++.. . ..+.++.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 46889999987421 12233221 25777776441 466663 35788887743 2 2333443
Q ss_pred ccCCCCceEEEeeCCCceEEEeecC-----------------CCCcEEEEeeCCcceEEeeccccceeEEEECCCCCEEE
Q 020784 212 TIANPKGLCAVSQGVGSLVLVCPGL-----------------QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLA 274 (321)
Q Consensus 212 ~~~~~~~~~~~s~~~d~~~la~sGs-----------------~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~la 274 (321)
+. .-....++..++++.+.+. +. ..|.|.-++ .+....+...-...+.|+|||||++|.
T Consensus 161 g~-~~~~pND~~v~~~G~fyvt-~~~~ftd~~~~~~e~~~~~~~g~vyr~d--~~~~~~~~~~l~~pNGia~spDg~~lY 236 (355)
T 3sre_A 161 HK-LLPSVNDIVAVGPEHFYAT-NDHYFIDPYLKSWEMHLGLAWSFVTYYS--PNDVRVVAEGFDFANGINISPDGKYVY 236 (355)
T ss_dssp CT-TCSSEEEEEEEETTEEEEE-ESCSCSSHHHHHHHHHTTCCCEEEEEEC--TTCCEEEEEEESSEEEEEECTTSSEEE
T ss_pred cC-CCCCCceEEEeCCCCEEec-CCcEeCCcccccchhhccCCccEEEEEE--CCeEEEeecCCcccCcceECCCCCEEE
Confidence 32 2223444545556676653 22 123333333 334444444445679999999998766
Q ss_pred EEe-CCCcEEEEEEcC-CCcEE--EEEeCCCcceeEEEee-cCceE
Q 020784 275 TSS-TKGTLVRIFNTL-DGTLL--QEECCPSISAQSGLWL-SSAWL 315 (321)
Q Consensus 275 s~S-~Dgt~IrIWd~~-tg~~i--~~~~~g~~~~~~~~s~-d~~~l 315 (321)
.+. ..+. |..|++. +|++- +.+..+...-.+++.. +|.+.
T Consensus 237 vadt~~~~-I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 237 IAELLAHK-IHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp EEEGGGTE-EEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEE
T ss_pred EEeCCCCe-EEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEE
Confidence 554 4556 9999986 45442 2343332233445556 46544
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.54 E-value=4.5 Score=34.49 Aligned_cols=187 Identities=14% Similarity=0.124 Sum_probs=90.5
Q ss_pred CCCEEEEEcCC------cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEE
Q 020784 96 DHGCFAAGTDH------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI 169 (321)
Q Consensus 96 dg~~lasg~~~------gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~ 169 (321)
++++++.|+.+ .+.+||..+.+........ ...........++ .+.+.+|.... ..-+.+.+||..+.+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~-~iyv~GG~~~~-~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR-DRRSTLGAAVLNG-LLYAVGGFDGS-TGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEEETT-EEEEEEEECSS-CEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC-ccccceEEEEECC-EEEEEcCCCCC-ccCceEEEEeCCCCeEe
Confidence 67777777632 3557777666543322221 1111111122244 44444432110 01246888998887755
Q ss_pred EEEeeCC--ceeEEEEeCCeEEEEEC---------CEEEEEEcCCcEEEEEEeccCCCC-ceEEEeeCCCceEEEeecCC
Q 020784 170 GELSFRS--EVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGLQ 237 (321)
Q Consensus 170 ~~~~~~~--~v~~v~~~~~~~~~~~~---------~~I~iwd~~~~~~~~~l~~~~~~~-~~~~~s~~~d~~~la~sGs~ 237 (321)
..-.... .-.++....+.+++..+ +.+.+||+.+.+= ..+.....+. ...+... ++.++++ |+.
T Consensus 138 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~ 213 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEW-TYIAEMSTRRSGAGVGVL--NNLLYAV-GGH 213 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-CCB
T ss_pred ecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcE-EECCCCccccccccEEEE--CCEEEEE-CCC
Confidence 4322221 12233444556665531 3588999876542 2222211111 1222223 3366665 554
Q ss_pred C-----CcEEEEeeCCcceEEeecc---ccceeEEEECCCCCEEEEEeCCC-----cEEEEEEcCCCc
Q 020784 238 K-----GQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGT 292 (321)
Q Consensus 238 d-----g~V~i~d~~~~~~~~l~~H---~~~V~~vafspdg~~las~S~Dg-----t~IrIWd~~tg~ 292 (321)
+ ..+.++|..+..-..+... ...-..+.+ ++++++.|+.++ . |.+||..+.+
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~ 278 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLAS-VEYYNPTTDK 278 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCccccc-EEEEcCCCCe
Confidence 3 3577788766543332211 111122222 677888887654 4 7889988765
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.50 E-value=4.5 Score=34.41 Aligned_cols=189 Identities=9% Similarity=0.058 Sum_probs=93.8
Q ss_pred CCCCEEEEEcC------CcEEEEEecCCc---eeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 95 QDHGCFAAGTD------HGFRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 95 ~dg~~lasg~~------~gv~vw~~~~~~---~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
-++++++.|+. +.+.+||..+.+ ........ ........... .+.+.+.+|.... ...+.+.++|..+
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~~~-~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN-VRRGLAGATTL-GDMIYVSGGFDGS-RRHTSMERYDPNI 137 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS-SCCBSCEEEEE-TTEEEEECCBCSS-CBCCEEEEEETTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC-CCccceeEEEE-CCEEEEEcccCCC-cccceEEEEcCCC
Confidence 35677777663 236678877765 43222221 11111111122 3455555543221 1135799999988
Q ss_pred CcEEEEEeeCC--ceeEEEEeCCeEEEEEC-------CEEEEEEcCCcEEEEEEeccCCCC-ceEEEeeCCCceEEEeec
Q 020784 166 SRCIGELSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 166 ~~~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~I~iwd~~~~~~~~~l~~~~~~~-~~~~~s~~~d~~~la~sG 235 (321)
.+....-.... .-.++....+.+++..+ +.+.+||+.+.+- ..+.....+. ...++.. ++.++++ |
T Consensus 138 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~-G 213 (301)
T 2vpj_A 138 DQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHW-TNVTPMATKRSGAGVALL--NDHIYVV-G 213 (301)
T ss_dssp TEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-C
T ss_pred CeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcE-EeCCCCCcccccceEEEE--CCEEEEE-e
Confidence 77544322221 12233334556666532 4789999876543 2332221221 1222233 3366665 5
Q ss_pred CCC-----CcEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEeCCC----cEEEEEEcCCCc
Q 020784 236 LQK-----GQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKG----TLVRIFNTLDGT 292 (321)
Q Consensus 236 s~d-----g~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S~Dg----t~IrIWd~~tg~ 292 (321)
+.+ ..|.++|..+..-..+.. ......++.+ ++++++.|+.++ ..|.+||.++.+
T Consensus 214 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 543 357778877654333221 1111222333 677888887663 227788888764
No 309
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.45 E-value=5.1 Score=34.94 Aligned_cols=186 Identities=11% Similarity=0.023 Sum_probs=92.6
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeee-ecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeC-
Q 020784 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD- 163 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~- 163 (321)
..+..+.+.++++.++++...+ ||............. .....+..+.+.+++..+++... .+-.+-+|-
T Consensus 122 ~~~~~i~~~~~~~~~~~~~~g~--v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~-------G~~~~S~d~g 192 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMITNVGA--IYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSR-------GSFYSTWEPG 192 (327)
T ss_dssp SCEEEEEEEETTEEEEEETTCC--EEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETT-------SSEEEEECTT
T ss_pred CCeEEEEEECCCCEEEEeCCcc--EEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECC-------CcEEEEeCCC
Confidence 3578888888888888776544 343333332222221 01334566666666555544331 133344442
Q ss_pred -CCCcEEEEEeeCCceeEEEEeCC-eEEEEE-CCEEEEEEcCCcEEEEEEecc--CCCCceEEEeeCCCceEEEeecCCC
Q 020784 164 -HQSRCIGELSFRSEVRSVKLRRD-RIIVVL-EQKIFVYNFADLKLLHQIETI--ANPKGLCAVSQGVGSLVLVCPGLQK 238 (321)
Q Consensus 164 -~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~-~~~I~iwd~~~~~~~~~l~~~--~~~~~~~~~s~~~d~~~la~sGs~d 238 (321)
.+-+.+ .......+..+.+.++ .++++. ++.+++.+...++....+... .......++...+++.++++ |. +
T Consensus 193 G~tW~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~-g~-~ 269 (327)
T 2xbg_A 193 QTAWEPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLA-GG-A 269 (327)
T ss_dssp CSSCEEE-ECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEE-ES-T
T ss_pred CCceeEC-CCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEE-eC-C
Confidence 121222 1122345667777553 444554 457766643334443333322 11123455555556677764 43 6
Q ss_pred CcEEEEeeCCcc-eEEee---ccccceeEEEECCCCCEEEEEeCCCcEEEEE
Q 020784 239 GQVRVEHYASKR-TKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIF 286 (321)
Q Consensus 239 g~V~i~d~~~~~-~~~l~---~H~~~V~~vafspdg~~las~S~Dgt~IrIW 286 (321)
|.|.+ ....+. -..+. .+...+.+|.|.+++.. +.++.+|+ |.-+
T Consensus 270 g~i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~-~~~G~~G~-i~~~ 318 (327)
T 2xbg_A 270 GALLC-SQDGGQTWQQDVDVKKVPSNFYKILFFSPDQG-FILGQKGI-LLRY 318 (327)
T ss_dssp TCEEE-ESSTTSSCEECGGGTTSSSCCCEEEEEETTEE-EEECSTTE-EEEE
T ss_pred CeEEE-eCCCCcccEEcCccCCCCCCeEEEEEECCCce-EEEcCCce-EEEE
Confidence 66644 222222 22232 23467889999866654 45667888 5444
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.17 E-value=5 Score=34.18 Aligned_cols=186 Identities=12% Similarity=0.160 Sum_probs=89.1
Q ss_pred CCEEEEEcC-----CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEE
Q 020784 97 HGCFAAGTD-----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE 171 (321)
Q Consensus 97 g~~lasg~~-----~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~ 171 (321)
+.+++.|+. +.+.+||..+.+........ ........... .+.+.+.+|.... ..-+.+.+||..+.+....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELP-SRRCRAGMVYM-AGLVFAVGGFNGS-LRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEEE-TTEEEEESCBCSS-SBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCC-cccccceEEEE-CCEEEEEeCcCCC-ccccceEEECCCCCceeeC
Confidence 445555553 23567777766543221210 11111111112 4455555553211 1236789999988875443
Q ss_pred EeeCC--ceeEEEEeCCeEEEEEC-------CEEEEEEcCCcEEEEEEeccCCCCc-eEEEeeCCCceEEEeecCCC---
Q 020784 172 LSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANPKG-LCAVSQGVGSLVLVCPGLQK--- 238 (321)
Q Consensus 172 ~~~~~--~v~~v~~~~~~~~~~~~-------~~I~iwd~~~~~~~~~l~~~~~~~~-~~~~s~~~d~~~la~sGs~d--- 238 (321)
-.... .-.++....+.+++..+ +.+.+||+.+.+- ..+.....+.. ..+... ++.++++ |+.+
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~ 168 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEW-FHVAPMNTRRSSVGVGVV--GGLLYAV-GGYDVAS 168 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-CCEETTT
T ss_pred CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeE-eecCCCCCcccCceEEEE--CCEEEEE-eCCCCCC
Confidence 22221 11233334555555432 3688899876543 23322222221 122223 3366665 5432
Q ss_pred ----CcEEEEeeCCcceEEee---ccccceeEEEECCCCCEEEEEeCCC-----cEEEEEEcCCCc
Q 020784 239 ----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGT 292 (321)
Q Consensus 239 ----g~V~i~d~~~~~~~~l~---~H~~~V~~vafspdg~~las~S~Dg-----t~IrIWd~~tg~ 292 (321)
..+.++|..+..-..+. ........+.+ ++++++.|+.++ . +.+||+.+.+
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~~~~ 231 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS-VEVYDPTTNA 231 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC-EEEEETTTTE
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccce-EEEEeCCCCC
Confidence 24667777655422221 11111222333 577888887653 5 8899998764
No 311
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.95 E-value=10 Score=37.21 Aligned_cols=190 Identities=16% Similarity=0.128 Sum_probs=108.1
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCC
Q 020784 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (321)
Q Consensus 85 ~~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~ 164 (321)
.+.|+++....+|. |-.|+.+|+..||..+.+....... ....|..+.. .+ ..+.+++ .+.|..+|..
T Consensus 62 ~~~i~~i~~d~~g~-lWigT~~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~-~~-g~lWigt--------~~Gl~~~~~~ 129 (758)
T 3ott_A 62 NTRIYCGVIIDNTY-LYMGTDNGILVYNYRADRYEQPETD-FPTDVRTMAL-QG-DTLWLGA--------LNGLYTYQLQ 129 (758)
T ss_dssp SSCEEEEEEETTTE-EEEEETTEEEEEETTTTEECCCSCC-CCSCEEEEEE-ET-TEEEEEE--------TTEEEEEETT
T ss_pred CceEEEEEEcCCCc-EEEEeCCCeEEEeCCCCEEECcccC-CCceEEEEEe-cC-CcEEEEc--------CCcceeEeCC
Confidence 35799998888875 4455578988999776532110000 0123444432 23 3455544 2468889987
Q ss_pred CCcEEEEEe----e-CCceeEEEEe-CCeEEEEECCEEEEEEcCCcEEEEEEeccCC----CCceEEEeeCCCc-eEEEe
Q 020784 165 QSRCIGELS----F-RSEVRSVKLR-RDRIIVVLEQKIFVYNFADLKLLHQIETIAN----PKGLCAVSQGVGS-LVLVC 233 (321)
Q Consensus 165 ~~~~~~~~~----~-~~~v~~v~~~-~~~~~~~~~~~I~iwd~~~~~~~~~l~~~~~----~~~~~~~s~~~d~-~~la~ 233 (321)
+++...... . ...|.++... ...+.+++.+.+..|+..+.+.. .+..... ...+.++..+.++ .+.+
T Consensus 130 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWi- 207 (758)
T 3ott_A 130 SRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWI- 207 (758)
T ss_dssp TCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEE-
T ss_pred CCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEE-
Confidence 766432201 1 2357777766 45688888888889998776542 2322111 1124555555433 3333
Q ss_pred ecCCCCcEEEEeeCCcceEEeec-cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 234 PGLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 234 sGs~dg~V~i~d~~~~~~~~l~~-H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
|+.+| +..++..++....+.. ....|++++...+|.+.+ |. ++. +.+++..+++.
T Consensus 208 -gt~~G-l~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT-~~G-l~~~~~~~~~~ 263 (758)
T 3ott_A 208 -GTEGY-LFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GT-DNG-LYVYHNDTTPL 263 (758)
T ss_dssp -EEEEE-EEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EE-TTE-EEEECCTTSCC
T ss_pred -EECCC-CeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-Ee-CCc-eeEEecCCCcE
Confidence 34333 5556665554433221 245699999999998776 44 456 77888877654
No 312
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.74 E-value=6.3 Score=34.46 Aligned_cols=135 Identities=10% Similarity=0.109 Sum_probs=64.7
Q ss_pred CcEEEEeCCCCcEEEEEeeCC--ce-eEEEEeCCeEEEEEC--------CEEEEEEc--CCcEEEEEEeccCCCC---ce
Q 020784 156 NKVMIWDDHQSRCIGELSFRS--EV-RSVKLRRDRIIVVLE--------QKIFVYNF--ADLKLLHQIETIANPK---GL 219 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~~~~--~v-~~v~~~~~~~~~~~~--------~~I~iwd~--~~~~~~~~l~~~~~~~---~~ 219 (321)
+.+.++|..+.+....-.... .- .++....+.+++..+ ..+.+||+ .+. ....+.....+. ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~-~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL-KWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C-EEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC-cEEecCCCCCCcccccc
Confidence 679999998887554332221 11 345555666666532 35777876 332 222222211111 22
Q ss_pred EEEeeCCCceEEEeecCCC----------------------CcEEEEeeCCcceE---EeeccccceeEEEECCCCCEEE
Q 020784 220 CAVSQGVGSLVLVCPGLQK----------------------GQVRVEHYASKRTK---FIMAHDSRIACFALTQDGQLLA 274 (321)
Q Consensus 220 ~~~s~~~d~~~la~sGs~d----------------------g~V~i~d~~~~~~~---~l~~H~~~V~~vafspdg~~la 274 (321)
.+...+ +.++++ |+.+ ..+.++|..+..-. .+......-.++. -++++++
T Consensus 247 ~~~~~~--~~iyv~-GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v 321 (357)
T 2uvk_A 247 FAGISN--DSLIFA-GGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLI 321 (357)
T ss_dssp EEEEET--TEEEEE-CCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEE
T ss_pred eEEEEC--CEEEEE-cCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEE
Confidence 233333 366665 5421 14566777654322 2222222222232 3678888
Q ss_pred EEeCCCc-----EEEEEEcCCCcEEEE
Q 020784 275 TSSTKGT-----LVRIFNTLDGTLLQE 296 (321)
Q Consensus 275 s~S~Dgt-----~IrIWd~~tg~~i~~ 296 (321)
.|+.++. -|-++++++++.+..
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 8886531 144558888887654
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.73 E-value=5.8 Score=34.00 Aligned_cols=187 Identities=12% Similarity=0.055 Sum_probs=89.1
Q ss_pred CCCEEEEEcC----------CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC
Q 020784 96 DHGCFAAGTD----------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (321)
Q Consensus 96 dg~~lasg~~----------~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~ 165 (321)
++++++.|+. +.+.+||..+.+........ ...........+ +.+.+.+|.... ...+.+.+||..+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~-~~iyv~GG~~~~-~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMS-VPRNRIGVGVID-GHIYAVGGSHGC-IHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCS-SCCBTCEEEEET-TEEEEECCEETT-EECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCC-cCccccEEEEEC-CEEEEEcCCCCC-cccccEEEECCCC
Confidence 5677776664 23557776665433222110 111111111223 345555542210 0125688999988
Q ss_pred CcEEEEEeeCC--ceeEEEEeCCeEEEEEC-------CEEEEEEcCCcEEEEEEeccCCCC-ceEEEeeCCCceEEEeec
Q 020784 166 SRCIGELSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 166 ~~~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~I~iwd~~~~~~~~~l~~~~~~~-~~~~~s~~~d~~~la~sG 235 (321)
.+....-.... .-.++....+.+++..+ +.+.+||+.+.+- ..+.....+. ...++.. ++.++++ |
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-G 222 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEW-RMITAMNTIRSGAGVCVL--HNCIYAA-G 222 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEE-C
T ss_pred CeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeE-eeCCCCCCccccceEEEE--CCEEEEE-e
Confidence 76543222221 11233334566666532 4688999876542 2222211111 1222223 3466665 5
Q ss_pred CCC-----CcEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEeCCC-----cEEEEEEcCCCc
Q 020784 236 LQK-----GQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGT 292 (321)
Q Consensus 236 s~d-----g~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S~Dg-----t~IrIWd~~tg~ 292 (321)
+.+ ..+.++|..+..-..+.. .......+.+ ++++++.|+.++ . |.+||..+.+
T Consensus 223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~ 289 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDS-VECYDPDTDT 289 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCE-EEEEETTTTE
T ss_pred CCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccce-EEEEcCCCCE
Confidence 543 357778876654332221 1111222222 577777777543 3 6788887754
No 314
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.70 E-value=5.8 Score=33.98 Aligned_cols=192 Identities=13% Similarity=0.093 Sum_probs=91.5
Q ss_pred EEcCCCCEEEEEcC-----CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCC---CCCCCCCcEEEEeC
Q 020784 92 SFNQDHGCFAAGTD-----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP---DPQYPLNKVMIWDD 163 (321)
Q Consensus 92 ~fs~dg~~lasg~~-----~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~---~~~~~d~~v~iWD~ 163 (321)
+..-++.+++.|+. +.+.+||..+.+........ ........... .+.+.+.+|.. ......+.+.++|.
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQ-VPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCC-cccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECC
Confidence 33445667776662 34667887766543221110 01111111122 34555555431 10011256889999
Q ss_pred CCCcEEEEEeeCC--ceeEEEEeCCeEEEEEC-------CEEEEEEcCCcEEEEEEeccCCCC-ceEEEeeCCCceEEEe
Q 020784 164 HQSRCIGELSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVC 233 (321)
Q Consensus 164 ~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~I~iwd~~~~~~~~~l~~~~~~~-~~~~~s~~~d~~~la~ 233 (321)
.+++....-.... .-.++....+.+++..+ +.+.+||+.+.+- ..+.....+. ...+... ++.++++
T Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 98 MTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEW-HLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp TTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred CCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeE-eECCCCCccccceEEEEE--CCEEEEE
Confidence 8876543222211 11233334556665532 4688999876542 2222111111 1122222 3466665
Q ss_pred ecCCC-----CcEEEEeeCCcceEEee---ccccceeEEEECCCCCEEEEEeCC-----CcEEEEEEcCCCc
Q 020784 234 PGLQK-----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGT 292 (321)
Q Consensus 234 sGs~d-----g~V~i~d~~~~~~~~l~---~H~~~V~~vafspdg~~las~S~D-----gt~IrIWd~~tg~ 292 (321)
|+.+ ..+.++|..+..-..+. .....-.++.+ ++++++.|+.+ .. +.+||+.+.+
T Consensus 175 -GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~ 242 (308)
T 1zgk_A 175 -GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNS-VERYDVETET 242 (308)
T ss_dssp -CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTE
T ss_pred -eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccce-EEEEeCCCCc
Confidence 5543 34667777655422221 11111223333 67777877764 45 8899988764
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.57 E-value=5.8 Score=33.70 Aligned_cols=187 Identities=11% Similarity=0.077 Sum_probs=91.4
Q ss_pred CCCEEEEEc-C------CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc-
Q 020784 96 DHGCFAAGT-D------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR- 167 (321)
Q Consensus 96 dg~~lasg~-~------~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~- 167 (321)
++.+++.|+ . +.+.+||..+.+........ ...........+ +.+.+.+|... ....+.+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~-~~l~v~GG~~~-~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSIT-RKRRYVASVSLH-DRIYVIGGYDG-RSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCS-SCCBSCEEEEET-TEEEEECCBCS-SCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCC-hhhccccEEEEC-CEEEEEcCCCC-CccCceEEEEECCCCCC
Confidence 456666666 2 23567777666533221110 111111112223 45555555321 1123679999998876
Q ss_pred --EEEEEeeCC--ceeEEEEeCCeEEEEEC-------CEEEEEEcCCcEEEEEEeccCCCC-ceEEEeeCCCceEEEeec
Q 020784 168 --CIGELSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPG 235 (321)
Q Consensus 168 --~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~I~iwd~~~~~~~~~l~~~~~~~-~~~~~s~~~d~~~la~sG 235 (321)
....-.... .-.++....+.+++..+ +.+.+||+.+.+-. .+.....+. ...++.. ++.++++ |
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~~~iyv~-G 166 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDMQTAREGAGLVVA--SGVIYCL-G 166 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEECSSCCBSCEEEEE--TTEEEEE-C
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCCCCCcccceEEEE--CCEEEEE-C
Confidence 443322221 12233334556666542 47899998765432 222211111 1222223 3466665 5
Q ss_pred CCC-----CcEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEeCC-----CcEEEEEEcCCCc
Q 020784 236 LQK-----GQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGT 292 (321)
Q Consensus 236 s~d-----g~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S~D-----gt~IrIWd~~tg~ 292 (321)
+.+ ..+.++|..+..-..+.. ....-.++.+ ++++++.|+.+ .. |.+||+.+.+
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~ 233 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSS-VEAYNIRTDS 233 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccce-EEEEeCCCCc
Confidence 543 346677776654332221 1111222333 57777888765 35 8899998865
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.99 E-value=0.4 Score=42.74 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=37.5
Q ss_pred CCCcEEEEeCCCCcEEEEEeeCCceeE--EEE-------------eCCeEEEEE-CCEEEEEEcCCcEEEEEEecc
Q 020784 154 PLNKVMIWDDHQSRCIGELSFRSEVRS--VKL-------------RRDRIIVVL-EQKIFVYNFADLKLLHQIETI 213 (321)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~~~~v~~--v~~-------------~~~~~~~~~-~~~I~iwd~~~~~~~~~l~~~ 213 (321)
.||.|..+|.++|.....+.....+.. +.. ....+++++ ++++...|+.+|+.+.++...
T Consensus 65 ~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 65 GDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred CCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 478999999888765544443221110 111 233344443 468999999999999998754
No 317
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.92 E-value=7.5 Score=33.82 Aligned_cols=193 Identities=12% Similarity=0.082 Sum_probs=93.7
Q ss_pred CCeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEee-ee---cCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEE
Q 020784 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRD-FE---RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (321)
Q Consensus 86 ~~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~-~~---~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iW 161 (321)
..+.+|.|.+++..+++|.. +..+...+-++ ..... .. ....+..+.+. .+.+.+++ .++.|..-
T Consensus 36 ~~~~~v~~~~~~~~~~~G~~-g~i~~s~DgG~-tW~~~~~~~~~~~~~~~~i~~~--~~~~~~~g-------~~g~i~~S 104 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVGVN-ATLMETRDGGQ-TWEPRTLVLDHSDYRFNSVSFQ--GNEGWIVG-------EPPIMLHT 104 (327)
T ss_dssp SCEEEEEESSSSCEEEEETT-TEEEEESSTTS-SCEECCCCCSCCCCEEEEEEEE--TTEEEEEE-------ETTEEEEE
T ss_pred CcEEEEEECCCCcEEEEcCC-CeEEEeCCCCC-CCeECCCCCCCCCccEEEEEec--CCeEEEEE-------CCCeEEEE
Confidence 47999999988888887654 43333333332 11111 10 02245555554 34444444 23434332
Q ss_pred eCCCCcEEEEEe----eCCceeEEEEe-CCeEEEEEC-CEE-EEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEee
Q 020784 162 DDHQSRCIGELS----FRSEVRSVKLR-RDRIIVVLE-QKI-FVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (321)
Q Consensus 162 D~~~~~~~~~~~----~~~~v~~v~~~-~~~~~~~~~-~~I-~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~s 234 (321)
+ +.|+.-..+. ....+..+.+. +..++++.+ +.| +-.| .++....+... ....+..+...+++.++++
T Consensus 105 ~-DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~D--gG~tW~~~~~~-~~~~~~~~~~~~~~~~~~~- 179 (327)
T 2xbg_A 105 T-DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKD--SGKNWQALVQE-AIGVMRNLNRSPSGEYVAV- 179 (327)
T ss_dssp S-STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESS--TTSSEEEEECS-CCCCEEEEEECTTSCEEEE-
T ss_pred C-CCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcC--CCCCCEEeecC-CCcceEEEEEcCCCcEEEE-
Confidence 1 2232211211 12345566653 445555553 333 2222 23333333221 1223445555566677774
Q ss_pred cCCCCcEEE-EeeCCcceE-EeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEE
Q 020784 235 GLQKGQVRV-EHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEE 297 (321)
Q Consensus 235 Gs~dg~V~i-~d~~~~~~~-~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~ 297 (321)
|. +|.+.. +|-....-. .-......+..+++.+++.+++. +.+|. +++.+...|+....+
T Consensus 180 g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~-~~~s~~D~G~tW~~~ 241 (327)
T 2xbg_A 180 SS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGK-IAFSDPDNSENWGEL 241 (327)
T ss_dssp ET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTE-EEEEETTEEEEECCC
T ss_pred EC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEE-eCCce-EEEecCCCCCeeEec
Confidence 44 455554 553222211 12345567899999999987764 45777 776643335544443
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.68 E-value=8.8 Score=32.65 Aligned_cols=188 Identities=13% Similarity=0.071 Sum_probs=93.9
Q ss_pred CCCEEEEEcC-----CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEE
Q 020784 96 DHGCFAAGTD-----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIG 170 (321)
Q Consensus 96 dg~~lasg~~-----~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~ 170 (321)
++++++.|+. +.+.+||..+.+........ ........... .+.+.+.+|.+......+.+-+||..+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP-TPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS-SCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC-ccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 6677777763 33567787776543332221 11111111122 34455555532111134679999998887544
Q ss_pred EEeeCC--ceeEEEEeCCeEEEEE-----------CCEEEEEEcCCcEEEEEEeccCCCC-ceEEEeeCCCceEEEeecC
Q 020784 171 ELSFRS--EVRSVKLRRDRIIVVL-----------EQKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGL 236 (321)
Q Consensus 171 ~~~~~~--~v~~v~~~~~~~~~~~-----------~~~I~iwd~~~~~~~~~l~~~~~~~-~~~~~s~~~d~~~la~sGs 236 (321)
.-.... .-.++....+.+++.. .+.+.+||+.+.+- ..+.....+. ...++.. ++.++++ |+
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~-GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW-TELCPMIEARKNHGLVFV--KDKIFAV-GG 208 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-CC
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeE-EECCCccchhhcceEEEE--CCEEEEE-eC
Confidence 322221 1122333455665553 24588999977542 3333222221 1222222 3366665 55
Q ss_pred CCC-----cEEEEeeCCcceEEee---ccccceeEEEECCCCCEEEEEeCC-----CcEEEEEEcCCCc
Q 020784 237 QKG-----QVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGT 292 (321)
Q Consensus 237 ~dg-----~V~i~d~~~~~~~~l~---~H~~~V~~vafspdg~~las~S~D-----gt~IrIWd~~tg~ 292 (321)
.++ .+.++|..+..-..+. .......++.+ ++++++.|+.+ .. |.+||..+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~ 274 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGH-ILEYNTETDK 274 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCE-EEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeee-EEEEcCCCCe
Confidence 432 4666777665432221 11222233333 67788888754 45 7889988864
No 319
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.47 E-value=4.6 Score=38.50 Aligned_cols=95 Identities=9% Similarity=-0.019 Sum_probs=64.2
Q ss_pred eeCCCceEEEeecCCCCcEEEEeeCCc------ce-------EEeeccccceeEEEECCCCCEEEEEeCCCcEEEEEEcC
Q 020784 223 SQGVGSLVLVCPGLQKGQVRVEHYASK------RT-------KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (321)
Q Consensus 223 s~~~d~~~la~sGs~dg~V~i~d~~~~------~~-------~~l~~H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~ 289 (321)
...|||.+++++|--+.+|.++++..- .+ ..-..-.-.....+|.++|.-..|.--|.. |--|++.
T Consensus 329 ~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSq-vvkWni~ 407 (638)
T 3sbq_A 329 NTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQ-VVKWNME 407 (638)
T ss_dssp EECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTE-EEEEEHH
T ss_pred eeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecce-EEEEecc
Confidence 335677888888999999999887621 11 111112334688999999966666666777 8899998
Q ss_pred CC----------cEEEEEeCCCcceeEEE------eecCceEEEe
Q 020784 290 DG----------TLLQEECCPSISAQSGL------WLSSAWLRVL 318 (321)
Q Consensus 290 tg----------~~i~~~~~g~~~~~~~~------s~d~~~la~~ 318 (321)
.. ..+..+...-+.-.+.. ..||+||.+.
T Consensus 408 ~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 408 EAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp HHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred HHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 64 56777765544444444 4899998764
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.12 E-value=10 Score=32.53 Aligned_cols=148 Identities=17% Similarity=0.172 Sum_probs=72.1
Q ss_pred CCeEEEEeCCC--CCCCCCCcEEEEeCCCCcEEEEEeeCC--ceeEEEEeCCeEEEEEC--------CEEEEEEcCCcEE
Q 020784 139 CNILALVGGGP--DPQYPLNKVMIWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVVLE--------QKIFVYNFADLKL 206 (321)
Q Consensus 139 ~~~~~~~sg~~--~~~~~d~~v~iWD~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~~--------~~I~iwd~~~~~~ 206 (321)
.+.+.+.+|.. ......+.+.++|..+++....-.... .-.++....+.+++..+ +.+.+||+.+.+=
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 44555555521 001124679999998876543222221 12233445556665532 4789999876532
Q ss_pred EEEEeccCCCC-ceEEEeeCCCceEEEeecCCCC-----cEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEe
Q 020784 207 LHQIETIANPK-GLCAVSQGVGSLVLVCPGLQKG-----QVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSS 277 (321)
Q Consensus 207 ~~~l~~~~~~~-~~~~~s~~~d~~~la~sGs~dg-----~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S 277 (321)
..+.....+. ...+... ++.++++ |+.++ .+.++|..+..-..+.. .......+.+ ++++++.|+
T Consensus 178 -~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG 251 (315)
T 4asc_A 178 -KELAPMQTARSLFGATVH--DGRIIVA-AGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGG 251 (315)
T ss_dssp -EECCCCSSCCBSCEEEEE--TTEEEEE-EEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEE
T ss_pred -EECCCCCCchhceEEEEE--CCEEEEE-eccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECC
Confidence 2222211121 1222233 3366665 54433 35557766654332221 1111222333 567777777
Q ss_pred CCC-------------cEEEEEEcCCCc
Q 020784 278 TKG-------------TLVRIFNTLDGT 292 (321)
Q Consensus 278 ~Dg-------------t~IrIWd~~tg~ 292 (321)
.++ ..|.+||+.+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 252 FATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred ccccCcCCccccccccCcEEEecCCCCh
Confidence 642 126678888764
No 321
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.88 E-value=1.4 Score=39.16 Aligned_cols=112 Identities=14% Similarity=0.123 Sum_probs=65.2
Q ss_pred eEEEEE-CCEEEEEEcCCcEEEEEEeccC-CCCceEEEe-e--CCCceEEEeecCCCCcEEEEeeCCcceE-Eeec----
Q 020784 187 RIIVVL-EQKIFVYNFADLKLLHQIETIA-NPKGLCAVS-Q--GVGSLVLVCPGLQKGQVRVEHYASKRTK-FIMA---- 256 (321)
Q Consensus 187 ~~~~~~-~~~I~iwd~~~~~~~~~l~~~~-~~~~~~~~s-~--~~d~~~la~sGs~dg~V~i~d~~~~~~~-~l~~---- 256 (321)
.+++++ ++.|.-+|..+|+.+-+++... .+ ..... + ..++..++...+.||.+..++..++..+ .+..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p--~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQP--LIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCC--SEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCC--cEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 344444 6799999999999999987651 11 11111 0 0122444421257888887776655322 1111
Q ss_pred cccceeE---EEE-C----CCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCCC
Q 020784 257 HDSRIAC---FAL-T----QDGQLLATSSTKGTLVRIFNTLDGTLLQEECCPS 301 (321)
Q Consensus 257 H~~~V~~---vaf-s----pdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g~ 301 (321)
..+++.. ..+ . -.+..+.+|+.+|+ +.-.|+++|+.+.++..+.
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~-l~ald~~tG~~~W~~~~~~ 141 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI-MYTINMLNGEIISAFGPGS 141 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEE-EEEEETTTCCEEEEESTTC
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCE-EEEEECCCCcEEEEEecCC
Confidence 1112221 000 0 03456778999999 9999999999999997664
No 322
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.32 E-value=0.85 Score=46.57 Aligned_cols=39 Identities=8% Similarity=0.051 Sum_probs=34.6
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC
Q 020784 260 RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 260 ~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~ 299 (321)
.+.+++..++..++.|-+.|++ +|||++.+|+++.+..-
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeeecc
Confidence 4677888888899999999999 99999999999998753
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=86.67 E-value=15 Score=31.77 Aligned_cols=204 Identities=9% Similarity=-0.013 Sum_probs=97.1
Q ss_pred EcCCCCEEEEEcC-CcEEEEEecCCce-eEEeeeecCCceEEEEEecCCCeEEEEeCCCC-------CCCCCCcEEEEeC
Q 020784 93 FNQDHGCFAAGTD-HGFRIYNCDPFRE-IFRRDFERGGGIGVVEMLFRCNILALVGGGPD-------PQYPLNKVMIWDD 163 (321)
Q Consensus 93 fs~dg~~lasg~~-~gv~vw~~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~-------~~~~d~~v~iWD~ 163 (321)
|+.+|.+|.-... +.-.||.++..+. ..... ... +--+..+++.+..+..... .......|+..++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~---~~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLS---NDT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEE---EEE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEcc---CCc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 3456777665542 2335776654332 11111 122 2234567777776653210 0012356777787
Q ss_pred CCCcEEEEEeeCCceeEEEEeCCeEEEEE---CC--EEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCC
Q 020784 164 HQSRCIGELSFRSEVRSVKLRRDRIIVVL---EQ--KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (321)
Q Consensus 164 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~---~~--~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~d 238 (321)
..++...... .....+....+.++.+. ++ .|..-++...+ ...+..+.. .++++.+ ..|..+....
T Consensus 96 dg~~~~~l~~--~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g--~~iy~t~~g~ 166 (302)
T 3s25_A 96 NGHGSTVLDP--DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSD--RYFYYNNPKN 166 (302)
T ss_dssp TSCCCEEEEC--SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEET--TEEEEECTTT
T ss_pred CCCcceEeec--CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEEC--CEEEEEeCCC
Confidence 7665322222 22234556667777665 33 56555665333 334443322 2345544 4455444445
Q ss_pred CcEEEEeeCCcceEEeeccccceeEEEECCCCCEEEEEeCCCc-EEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEE
Q 020784 239 GQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGT-LVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRV 317 (321)
Q Consensus 239 g~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~~las~S~Dgt-~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~ 317 (321)
..|...++..+....+.. +.. ...++|+|.+|+=..+++. .|..-++..+. ...+.. .....+++++.+|..
T Consensus 167 ~~Iy~~~l~g~~~~~l~~--~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~---~~~~~~~~~g~~Iy~ 239 (302)
T 3s25_A 167 GQLYRYDTASQSEALFYD--CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE---ANIEHYNVYGSLIFY 239 (302)
T ss_dssp CCEEEEETTTTEEEEEEC--SCE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC---SCEEEEEEETTEEEE
T ss_pred ceEEEEECCCCCEEEEeC--CCc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC---CCcceEEECCCEEEE
Confidence 677777776655444422 222 2346688887776554432 14333444333 222311 111345666666543
No 324
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.49 E-value=21 Score=31.43 Aligned_cols=63 Identities=13% Similarity=0.160 Sum_probs=38.8
Q ss_pred EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcE--EEEEe----eCCceeEEEEeCC-----eEEEEEC------
Q 020784 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC--IGELS----FRSEVRSVKLRRD-----RIIVVLE------ 193 (321)
Q Consensus 131 ~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~--~~~~~----~~~~v~~v~~~~~-----~~~~~~~------ 193 (321)
..+++.++++++ ++. .++.|++++ .++. +..+. .......++++++ .++++..
T Consensus 34 ~~ia~~pdG~l~-V~e-------~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 34 WALAFLPDGGML-IAE-------RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp EEEEECTTSCEE-EEE-------TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred eEEEEcCCCeEE-EEe-------CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 456777787744 333 347899998 3432 22221 1235788999987 6777643
Q ss_pred -CEEEEEEcCC
Q 020784 194 -QKIFVYNFAD 203 (321)
Q Consensus 194 -~~I~iwd~~~ 203 (321)
+.|..|+...
T Consensus 104 ~~~v~r~~~~~ 114 (352)
T 2ism_A 104 RNQVVRLRHLG 114 (352)
T ss_dssp EEEEEEEEECS
T ss_pred ccEEEEEEeCC
Confidence 5777888764
No 325
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.38 E-value=0.84 Score=47.54 Aligned_cols=39 Identities=8% Similarity=0.051 Sum_probs=33.9
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeC
Q 020784 260 RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 260 ~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~ 299 (321)
.+.+++..++..++.|-+.|++ +||||+.+|+|+.+..-
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEeech
Confidence 4566777788899999999999 99999999999998764
No 326
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=84.21 E-value=30 Score=33.16 Aligned_cols=183 Identities=7% Similarity=-0.028 Sum_probs=91.8
Q ss_pred EEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcE-EEEEeeC-Cc
Q 020784 100 FAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC-IGELSFR-SE 177 (321)
Q Consensus 100 lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~-~~~~~~~-~~ 177 (321)
|.-+..+.|+..+++............-+....+++.+..+.+..+.. ..+.|..++.+.... ...+... ..
T Consensus 12 ~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~------~~~~I~r~~~~g~~~~~~v~~~~~~~ 85 (619)
T 3s94_A 12 LLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLLS 85 (619)
T ss_dssp EEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC-----CEEEECSSCSC
T ss_pred EEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEEC------CCCeEEEEEccCCCceEEEEeCCCCC
Confidence 444445666766665432111111101234556677776777766652 347788888865432 1122222 35
Q ss_pred eeEEEEeC--CeEEEEEC--CEEEEEEcCCcEEEEEEe-ccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeCCcceE
Q 020784 178 VRSVKLRR--DRIIVVLE--QKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK 252 (321)
Q Consensus 178 v~~v~~~~--~~~~~~~~--~~I~iwd~~~~~~~~~l~-~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~ 252 (321)
+..+++.. ..++++.. +.|.+.++..... +.+. .....-.-+++.+.. +.++.+--...+.|...++......
T Consensus 86 P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~-g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 86 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSS-GFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCCEEEETTT-TEEEEEECSSSCEEEEEETTSCSCE
T ss_pred cCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCceEEEecCC-CeEEEeccCCCCEEEEEECCCCceE
Confidence 67777764 56666643 5999999865432 2332 211111234444432 3343321122345655555544433
Q ss_pred Eee-ccccceeEEEECCCCC-EEEEEeCCCcEEEEEEcCCC
Q 020784 253 FIM-AHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDG 291 (321)
Q Consensus 253 ~l~-~H~~~V~~vafspdg~-~las~S~Dgt~IrIWd~~tg 291 (321)
++. ..-...+.|++++++. +..+=+..+. |...|+...
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~-I~~~~~dG~ 203 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGT 203 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCC-EEEESSSCC
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCe-EEEecCCCC
Confidence 332 3345689999998654 4444455566 888888643
No 327
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=84.15 E-value=18 Score=30.57 Aligned_cols=186 Identities=11% Similarity=0.120 Sum_probs=90.4
Q ss_pred CCEEEEEcC---CcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEe
Q 020784 97 HGCFAAGTD---HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (321)
Q Consensus 97 g~~lasg~~---~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~ 173 (321)
+.+++.|+. +.+.+||..+.+........ ........... .+.+.+.+|.. ...-+.+.++|..+++....-.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPF-EKRRDAACVFW-DNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCS-CCCBSCEEEEE-TTEEEEECCBS--SSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCC-cccceeEEEEE-CCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCC
Confidence 345555653 44778887776543222110 11111111122 34455555532 1124678999999887654322
Q ss_pred eCC--ceeEEEEeCCeEEEEEC--------CEEEEEEcCCcEEEEEEeccCCCC-ceEEEeeCCCceEEEeecCC-----
Q 020784 174 FRS--EVRSVKLRRDRIIVVLE--------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGLQ----- 237 (321)
Q Consensus 174 ~~~--~v~~v~~~~~~~~~~~~--------~~I~iwd~~~~~~~~~l~~~~~~~-~~~~~s~~~d~~~la~sGs~----- 237 (321)
... .-.++....+.+++..+ +.+.+||..+.+- ..+.....+. ...+... ++.++++ |+.
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~ 163 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESW-HTKPSMLTQRCSHGMVEA--NGLIYVC-GGSLGNNV 163 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-CCEESCTT
T ss_pred CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCce-EeCCCCcCCcceeEEEEE--CCEEEEE-CCCCCCCC
Confidence 222 11233344556665532 3688999877643 2232211111 1222223 3366665 543
Q ss_pred ----CCcEEEEeeCCcceEEeecc--ccceeEEEECCCCCEEEEEeCC-----CcEEEEEEcCCCc
Q 020784 238 ----KGQVRVEHYASKRTKFIMAH--DSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGT 292 (321)
Q Consensus 238 ----dg~V~i~d~~~~~~~~l~~H--~~~V~~vafspdg~~las~S~D-----gt~IrIWd~~tg~ 292 (321)
-..+.++|..+..-..+... ...-.+++.. ++++++.|+.+ .. +.+||+.+.+
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~-~~~yd~~~~~ 227 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDN-VEYYDIKLNE 227 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCC-EEEEETTTTE
T ss_pred cccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCce-EEEeeCCCCc
Confidence 23466788766543333211 1111122222 67777777654 34 7889988764
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.34 E-value=32 Score=32.81 Aligned_cols=128 Identities=13% Similarity=0.177 Sum_probs=69.5
Q ss_pred EEEEEcCCCCEEEEEcC--CcEEEEEecCCce-----------eEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCC
Q 020784 89 LHISFNQDHGCFAAGTD--HGFRIYNCDPFRE-----------IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (321)
Q Consensus 89 ~~v~fs~dg~~lasg~~--~gv~vw~~~~~~~-----------~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d 155 (321)
..|.++|||+++++++. .++-|++++.... ....+. .-+.+-+...|+++..+..+ +|-|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~--e~GlGPlHt~Fd~~G~aYTt-----lfid 398 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP--ELGLGPLHTTFDGRGNAYTT-----LFID 398 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC--BCCSCEEEEEECSSSEEEEE-----ETTT
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec--cCCCcccEEEECCCCceEee-----eeec
Confidence 35889999999998886 5588999874221 111111 11223333334444445444 4578
Q ss_pred CcEEEEeCCCC----------cEEEEEeeCCceeEEEEe--------CCeEEEEE--------------CCEEEEEEc--
Q 020784 156 NKVMIWDDHQS----------RCIGELSFRSEVRSVKLR--------RDRIIVVL--------------EQKIFVYNF-- 201 (321)
Q Consensus 156 ~~v~iWD~~~~----------~~~~~~~~~~~v~~v~~~--------~~~~~~~~--------------~~~I~iwd~-- 201 (321)
..|..||+... ..+..+..+-.+--+.-. .+.+++.. -..-.++|+
T Consensus 399 SqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 399 SQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp TEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred ceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 99999997642 345455544333222221 11222221 025677787
Q ss_pred CCcEEEEEEeccCCCCceEEEe
Q 020784 202 ADLKLLHQIETIANPKGLCAVS 223 (321)
Q Consensus 202 ~~~~~~~~l~~~~~~~~~~~~s 223 (321)
.++++++.......|...+.+.
T Consensus 479 dkM~lv~D~P~~~EPHda~~v~ 500 (638)
T 3sbq_A 479 DEMKLVHDGPTFAEPHDCIMAR 500 (638)
T ss_dssp SSCEEEEEEEESSCCCCEEEEE
T ss_pred CceEEEecCCCCCCCcceEEec
Confidence 4577777766655554444443
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=83.32 E-value=28 Score=32.14 Aligned_cols=129 Identities=9% Similarity=0.066 Sum_probs=79.0
Q ss_pred CCcEEEEeCCCCcEEEEEeeCCceeEEEEeCC--eEEEEECCEEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEE
Q 020784 155 LNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (321)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la 232 (321)
...|.|-|+.++..+..-.... -+.-+|+. .+++=.+.++.|||+++.+.++.+..... +....+-. + ..|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A--dsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~-VvfWkWis--~-~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA--DSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDD-VTFWKWIS--L-NTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC--SEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSC-CCEEEEEE--T-TEEE
T ss_pred CCeEEEEECCCCCcceeccccc--ceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCC-ceEEEecC--C-CeEE
Confidence 3579999998866442222111 12234443 33443577999999999888887776443 33333332 2 2343
Q ss_pred eecCCCCcEEEEeeCC--cceEEeeccc----cceeEEEECCCCCEEEEEe-------CCCcEEEEEEcCCCc
Q 020784 233 CPGLQKGQVRVEHYAS--KRTKFIMAHD----SRIACFALTQDGQLLATSS-------TKGTLVRIFNTLDGT 292 (321)
Q Consensus 233 ~sGs~dg~V~i~d~~~--~~~~~l~~H~----~~V~~vafspdg~~las~S-------~Dgt~IrIWd~~tg~ 292 (321)
.. .+..|+-|++.. .+.+.|..|. ..|..-..+++.++++-.+ -.|. +.+|..+.+.
T Consensus 121 lV--T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~-mQLYS~er~~ 190 (494)
T 1bpo_A 121 LV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA-MQLYSVDRKV 190 (494)
T ss_dssp EE--CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEE-EEEEESTTCC
T ss_pred EE--cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccce-EEEeeccccc
Confidence 31 234788899853 5677887774 4577777789999877533 2456 8888887654
No 330
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.09 E-value=2 Score=42.17 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=32.6
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcEEEEEeCC
Q 020784 259 SRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEECCP 300 (321)
Q Consensus 259 ~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~i~~~~~g 300 (321)
..|.++.+. ..+++|-+.|.+ +||||+++++++.+..-.
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~-LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCH-LKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCE-EEEEETTTTEEEEEEETT
T ss_pred ceEEEeccC--CcEEEEEEcCCe-EEEEEcCCCceEEeeccc
Confidence 456666653 679999999999 999999999999988763
No 331
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=82.24 E-value=26 Score=30.88 Aligned_cols=134 Identities=9% Similarity=0.132 Sum_probs=68.3
Q ss_pred EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc-EEEEEe----eCCceeEEEEeCC-----eEEEEEC-------
Q 020784 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR-CIGELS----FRSEVRSVKLRRD-----RIIVVLE------- 193 (321)
Q Consensus 131 ~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~-~~~~~~----~~~~v~~v~~~~~-----~~~~~~~------- 193 (321)
..+++.++++++ ++. .++.|+++| .+++ .+..+. .......++++++ .++++..
T Consensus 32 ~~ia~~pdG~l~-V~e-------~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 32 WSIAPLGGGRYL-VTE-------RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp EEEEEEETTEEE-EEE-------TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred eEEEEcCCCeEE-EEe-------CCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 445667777643 333 347888887 3444 222221 1235788999986 6666532
Q ss_pred --CEEEEEEcCCc-------EE-EEEEecc-CCCCceEEEeeCCCceEEEeecCC------------CCcEEEEeeCCc-
Q 020784 194 --QKIFVYNFADL-------KL-LHQIETI-ANPKGLCAVSQGVGSLVLVCPGLQ------------KGQVRVEHYASK- 249 (321)
Q Consensus 194 --~~I~iwd~~~~-------~~-~~~l~~~-~~~~~~~~~s~~~d~~~la~sGs~------------dg~V~i~d~~~~- 249 (321)
+.|..|+.... +. +..+... .+....++|. +|+.+.+..|+. .|.|.-.+...+
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~--pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~ 180 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFG--PDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP 180 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEEC--TTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEEC--CCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC
Confidence 56777776543 11 1123211 1112334444 455666644542 233433333222
Q ss_pred --------ceEEeeccccceeEEEECC-CCCEEEEE
Q 020784 250 --------RTKFIMAHDSRIACFALTQ-DGQLLATS 276 (321)
Q Consensus 250 --------~~~~l~~H~~~V~~vafsp-dg~~las~ 276 (321)
....-.+| .....++|+| +|.++++-
T Consensus 181 p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 181 PADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEE
T ss_pred CCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEe
Confidence 11122334 3467899999 78877764
No 332
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=81.82 E-value=27 Score=30.79 Aligned_cols=139 Identities=10% Similarity=-0.012 Sum_probs=81.1
Q ss_pred eeEEEEeC--CeEEEEE--CCEEEEEEcCCcEEEEE-Eec----cCCCCceEEEee---CCCceEEEeec----------
Q 020784 178 VRSVKLRR--DRIIVVL--EQKIFVYNFADLKLLHQ-IET----IANPKGLCAVSQ---GVGSLVLVCPG---------- 235 (321)
Q Consensus 178 v~~v~~~~--~~~~~~~--~~~I~iwd~~~~~~~~~-l~~----~~~~~~~~~~s~---~~d~~~la~sG---------- 235 (321)
.-+..|+. ..++++. .++|..||...+..... +.. .........+.. ++++.++++.-
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 45677875 5666665 57999999875543322 221 111123456677 67777777422
Q ss_pred --CCCCcEEEEeeC---Ccc-eE--Eeeccc-----------cceeEEEECCCCCEEEEEeCC-CcEEEEEEcCCCcEEE
Q 020784 236 --LQKGQVRVEHYA---SKR-TK--FIMAHD-----------SRIACFALTQDGQLLATSSTK-GTLVRIFNTLDGTLLQ 295 (321)
Q Consensus 236 --s~dg~V~i~d~~---~~~-~~--~l~~H~-----------~~V~~vafspdg~~las~S~D-gt~IrIWd~~tg~~i~ 295 (321)
+.+..|..+|+. ++. +. .|.... ...+.++..++|+.-++++.. +. |-..+-. |+.+.
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~-I~rV~pd-G~~~~ 172 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA-IARVSAD-GKTVS 172 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE-EEEECTT-SCCEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe-EEEEeCC-CCEEe
Confidence 124567778877 443 32 232222 248899999999999999987 66 4333332 44333
Q ss_pred EEeCCC----c---ceeEEEeecCceEEEe
Q 020784 296 EECCPS----I---SAQSGLWLSSAWLRVL 318 (321)
Q Consensus 296 ~~~~g~----~---~~~~~~s~d~~~la~~ 318 (321)
.+.... . ...+.+.+||..|.++
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~ 202 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAF 202 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEE
Confidence 321111 1 2256778889888765
No 333
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=79.57 E-value=33 Score=30.43 Aligned_cols=76 Identities=11% Similarity=0.149 Sum_probs=44.2
Q ss_pred EEEeeCCCceEEEeecCCCCcEEEEeeCC-cceE---EeeccccceeEEEECC-CCCEEEEEeCCCcEEEEEEcC--CCc
Q 020784 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTK---FIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTL--DGT 292 (321)
Q Consensus 220 ~~~s~~~d~~~la~sGs~dg~V~i~d~~~-~~~~---~l~~H~~~V~~vafsp-dg~~las~S~Dgt~IrIWd~~--tg~ 292 (321)
+++++ |+..+.++-+..+.|..+++.. +.+. .+ ...+....+++.+ +|.+.+++..++..|..|+-. .+.
T Consensus 226 ia~sp--Dg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s 302 (355)
T 3sre_A 226 INISP--DGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGS 302 (355)
T ss_dssp EEECT--TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCE
T ss_pred ceECC--CCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCC
Confidence 44544 5554444456667888887753 2222 34 3356788999999 599888777664323333322 245
Q ss_pred EEEEEe
Q 020784 293 LLQEEC 298 (321)
Q Consensus 293 ~i~~~~ 298 (321)
.+..++
T Consensus 303 ~v~rI~ 308 (355)
T 3sre_A 303 EVLRIQ 308 (355)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555554
No 334
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=79.33 E-value=32 Score=30.15 Aligned_cols=77 Identities=13% Similarity=0.045 Sum_probs=41.0
Q ss_pred CeEEEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeee----ecCCceEEEEEecC---CCeEEEEeCCCCCCCCCCcEE
Q 020784 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDF----ERGGGIGVVEMLFR---CNILALVGGGPDPQYPLNKVM 159 (321)
Q Consensus 87 ~V~~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~----~~~~~v~~v~~~~~---~~~~~~~sg~~~~~~~d~~v~ 159 (321)
.-..++|.|||+++++-..+.|.+++ .++....... ........++++++ ...+.++...... -..+.|.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~-~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG-GLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT-SSEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC-CCccEEE
Confidence 45789999999987776665577776 3332111111 01234566677765 3344444311000 0015677
Q ss_pred EEeCCCC
Q 020784 160 IWDDHQS 166 (321)
Q Consensus 160 iWD~~~~ 166 (321)
.++...+
T Consensus 109 r~~~~~~ 115 (352)
T 2ism_A 109 RLRHLGE 115 (352)
T ss_dssp EEEECSS
T ss_pred EEEeCCC
Confidence 7877643
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=77.82 E-value=37 Score=30.02 Aligned_cols=150 Identities=13% Similarity=0.156 Sum_probs=74.2
Q ss_pred EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEE--EE-----eeCCceeEEEEeCC-----eEEEEE----CC
Q 020784 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIG--EL-----SFRSEVRSVKLRRD-----RIIVVL----EQ 194 (321)
Q Consensus 131 ~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~--~~-----~~~~~v~~v~~~~~-----~~~~~~----~~ 194 (321)
..+++.+++.++++-- ..+.|++++...++... .+ ........++++++ .+++.. .+
T Consensus 35 ~~ia~~pdG~llVter-------~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 35 WGLAPLPGGDLLVSSR-------DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp EEEEECTTSCEEEEET-------TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred eEEEEcCCCcEEEEEe-------cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 3456667776544332 24788888866555321 11 11235778999874 465542 34
Q ss_pred EEEEEEcCC----------cEEE-EEEec-cCCCCceEEEeeCCCceEEEeecCC------------CCc-EEEEeeCCc
Q 020784 195 KIFVYNFAD----------LKLL-HQIET-IANPKGLCAVSQGVGSLVLVCPGLQ------------KGQ-VRVEHYASK 249 (321)
Q Consensus 195 ~I~iwd~~~----------~~~~-~~l~~-~~~~~~~~~~s~~~d~~~la~sGs~------------dg~-V~i~d~~~~ 249 (321)
.|.-|.+.. .+.+ ..+.. ..+....+.|. +|+.+.+..|+. .|. ++| +....
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg--pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi-~~dG~ 184 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG--PDKMLYAGTGESGDTGLSQDRKSLGGKILRM-TPDGE 184 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC--TTSCEEEECBCTTCGGGTTCTTCSTTCEEEE-CTTSS
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC--CCCCEEEEECCCCCCccccCCCCCCCEEEEE-eCCCC
Confidence 666665543 1221 22321 11222334554 455666654531 233 333 22221
Q ss_pred ---------ceEEeeccccceeEEEECCCCCEEEEE-eCCCcEEEEEEcCCCc
Q 020784 250 ---------RTKFIMAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDGT 292 (321)
Q Consensus 250 ---------~~~~l~~H~~~V~~vafspdg~~las~-S~Dgt~IrIWd~~tg~ 292 (321)
....-.+|. ....++|+|+|.++++= +.|+. =.|--+..|.
T Consensus 185 ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~-deln~i~~G~ 235 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTW-DELNAIKPGD 235 (347)
T ss_dssp BCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSC-EEEEEECTTC
T ss_pred ccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCC-ceeeEEcCCC
Confidence 111223554 46789999999888764 33433 3444444443
No 336
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=77.00 E-value=39 Score=29.93 Aligned_cols=104 Identities=13% Similarity=0.184 Sum_probs=67.9
Q ss_pred EEEEcCCCCEEEEEcCCcEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCC-CcE
Q 020784 90 HISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-SRC 168 (321)
Q Consensus 90 ~v~fs~dg~~lasg~~~gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~-~~~ 168 (321)
+.-.+|..+.||-=..+.+.|||+++...+....+ ...|....|. +.+.+++++ +..|..|++.. ...
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnletK~klks~~~--~e~VvfWkWi-s~~~L~lVT--------~taVyHWs~~~~s~P 139 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM--TDDVTFWKWI-SLNTVALVT--------DNAVYHWSMEGESQP 139 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEEC--SSCEEEEEEC-SSSEEEEEE--------SSEEEEEESSTTCCC
T ss_pred eeeeCCCccEEEEecCCeEEEechHHhhhhcceec--CCccEEEEec-CCCeEEEEc--------CCcEEEEcccCCCCC
Confidence 34457888877766667789999999988777666 5667666664 566788877 47899999864 345
Q ss_pred EEEEeeCC-----ceeEEEEeCC--eEEEEE----C----CEEEEEEcCCc
Q 020784 169 IGELSFRS-----EVRSVKLRRD--RIIVVL----E----QKIFVYNFADL 204 (321)
Q Consensus 169 ~~~~~~~~-----~v~~v~~~~~--~~~~~~----~----~~I~iwd~~~~ 204 (321)
+..++.+. .|.....+++ .+++++ + |.+.+|..+..
T Consensus 140 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~ 190 (365)
T 2xzh_A 140 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 190 (365)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT
T ss_pred ceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc
Confidence 55555432 4555555554 232221 1 56777777653
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=76.19 E-value=59 Score=31.55 Aligned_cols=195 Identities=12% Similarity=0.097 Sum_probs=94.7
Q ss_pred CCCCEEEEEcC-----CcEEEEEecCCceeEEe-e-----eecCCceEEEEEecC-CCeEEEEeCCCCCCCCCCcEEEEe
Q 020784 95 QDHGCFAAGTD-----HGFRIYNCDPFREIFRR-D-----FERGGGIGVVEMLFR-CNILALVGGGPDPQYPLNKVMIWD 162 (321)
Q Consensus 95 ~dg~~lasg~~-----~gv~vw~~~~~~~~~~~-~-----~~~~~~v~~v~~~~~-~~~~~~~sg~~~~~~~d~~v~iWD 162 (321)
-++.+++.|+. +.+.+||..+.+..... . . ............. ++.+.+.+|.......-+.+-+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~-p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEV-PVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCC-CCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCC-CccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 56777777764 23668888776544332 1 1 0111111122221 344555555332110125689999
Q ss_pred CCCCcEEEEEeeCC--ceeEEEE-eCCeEEEEEC----CEEEEEEcCCcEEEEEEec---cCCC-CceEEEeeCCC-ceE
Q 020784 163 DHQSRCIGELSFRS--EVRSVKL-RRDRIIVVLE----QKIFVYNFADLKLLHQIET---IANP-KGLCAVSQGVG-SLV 230 (321)
Q Consensus 163 ~~~~~~~~~~~~~~--~v~~v~~-~~~~~~~~~~----~~I~iwd~~~~~~~~~l~~---~~~~-~~~~~~s~~~d-~~~ 230 (321)
..+......-.... .-.++.. ..+.+++.++ +.+.+||..+.+ ...+.. ...+ ....++..+.+ +.+
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 98876543322211 1122333 3555666543 168999997754 223321 1111 11122222222 466
Q ss_pred EEeecCC--C-----CcEEEEeeCCcc------eEEeec---cccceeEEEECCCCCEEEEEeCC--------CcEEEEE
Q 020784 231 LVCPGLQ--K-----GQVRVEHYASKR------TKFIMA---HDSRIACFALTQDGQLLATSSTK--------GTLVRIF 286 (321)
Q Consensus 231 la~sGs~--d-----g~V~i~d~~~~~------~~~l~~---H~~~V~~vafspdg~~las~S~D--------gt~IrIW 286 (321)
+++ |+. + ..+.+||..+.. -..+.. ....-.+++...++++++.|+.+ .. |.+|
T Consensus 554 yv~-GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-v~~y 631 (695)
T 2zwa_A 554 IIL-GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS-IISL 631 (695)
T ss_dssp EEE-CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS-EEEE
T ss_pred EEE-CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe-EEEE
Confidence 665 544 2 346678877655 222211 11111233333447788878743 45 8899
Q ss_pred EcCCCcE
Q 020784 287 NTLDGTL 293 (321)
Q Consensus 287 d~~tg~~ 293 (321)
|+.+.+-
T Consensus 632 d~~t~~W 638 (695)
T 2zwa_A 632 DPLSETL 638 (695)
T ss_dssp ETTTTEE
T ss_pred ECCCCeE
Confidence 9988753
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=75.81 E-value=36 Score=28.90 Aligned_cols=131 Identities=12% Similarity=0.221 Sum_probs=64.5
Q ss_pred CcEEEEeCCCCcEEEEEeeCCc--eeEEEEeCCeEEEEEC--------CEEEEEEcCCcEEEEEEeccCCCCc-eEEEee
Q 020784 156 NKVMIWDDHQSRCIGELSFRSE--VRSVKLRRDRIIVVLE--------QKIFVYNFADLKLLHQIETIANPKG-LCAVSQ 224 (321)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~~~~~--v~~v~~~~~~~~~~~~--------~~I~iwd~~~~~~~~~l~~~~~~~~-~~~~s~ 224 (321)
+.+.++|..+.+....-..... -.++....+.+++..+ +.+.+||+.+.+= ..+.....+.. ..+...
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~ 205 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAIH 205 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEE-EECCCCCCCcccceEEEE
Confidence 5688899988775543222211 1123334556655532 3689999977542 23322212211 122223
Q ss_pred CCCceEEEeecCCC----CcEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEeCC--------------CcEE
Q 020784 225 GVGSLVLVCPGLQK----GQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTK--------------GTLV 283 (321)
Q Consensus 225 ~~d~~~la~sGs~d----g~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S~D--------------gt~I 283 (321)
++.++++.|..+ ..+.++|..+..-..+.. .......+.+ ++++++.|+.+ .. |
T Consensus 206 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~-v 280 (318)
T 2woz_A 206 --KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVND-I 280 (318)
T ss_dssp --TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----CCBCCBCCC-E
T ss_pred --CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeeccCCCCceeccceeee-E
Confidence 336666533222 234557766554332221 1111122222 56777777654 34 7
Q ss_pred EEEEcCCCc
Q 020784 284 RIFNTLDGT 292 (321)
Q Consensus 284 rIWd~~tg~ 292 (321)
.+||+.+.+
T Consensus 281 ~~yd~~~~~ 289 (318)
T 2woz_A 281 WKYEDDKKE 289 (318)
T ss_dssp EEEETTTTE
T ss_pred EEEeCCCCE
Confidence 788888764
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=70.49 E-value=65 Score=29.46 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=24.0
Q ss_pred ccccceeEEEECCCCCEEEEE-eCCCcEEEEEEcCCCc
Q 020784 256 AHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDGT 292 (321)
Q Consensus 256 ~H~~~V~~vafspdg~~las~-S~Dgt~IrIWd~~tg~ 292 (321)
+| +.+..++|+|+|.++++- +.|+. -.|.-+..|.
T Consensus 226 G~-RNp~gla~dp~G~L~~~d~g~~~~-dein~i~~G~ 261 (454)
T 1cru_A 226 GH-RNPQGLAFTPNGKLLQSEQGPNSD-DEINLIVKGG 261 (454)
T ss_dssp CC-SEEEEEEECTTSCEEEEEECSSSC-EEEEECCTTC
T ss_pred CC-CCcceEEECCCCCEEEEecCCCCC-eEEEEecCCC
Confidence 44 457899999999877764 44555 5666666654
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=67.14 E-value=57 Score=27.55 Aligned_cols=186 Identities=15% Similarity=0.119 Sum_probs=88.3
Q ss_pred EEEEEcCCcEEEEEecCCceeEEeeeec-CCceEEEEEecCCCeEEEEeC----CCCCCCCCCcEEEEeCCCCcEEEEEe
Q 020784 99 CFAAGTDHGFRIYNCDPFREIFRRDFER-GGGIGVVEMLFRCNILALVGG----GPDPQYPLNKVMIWDDHQSRCIGELS 173 (321)
Q Consensus 99 ~lasg~~~gv~vw~~~~~~~~~~~~~~~-~~~v~~v~~~~~~~~~~~~sg----~~~~~~~d~~v~iWD~~~~~~~~~~~ 173 (321)
+++.|+ +.+.+||..+.+... ..... ...........++.++++.+- ..........+.+||..+++....-.
T Consensus 7 l~~~GG-~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE-EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET-TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC-CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 567788888776542 22200 122233333444544444441 11000012347888988877543222
Q ss_pred eCC--ceeEEEEeCCeEEEEEC----------CEEEEEEcCCcEEEEEEeccCCCC-ceEEEeeCCCceEEEeecCC-C-
Q 020784 174 FRS--EVRSVKLRRDRIIVVLE----------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGLQ-K- 238 (321)
Q Consensus 174 ~~~--~v~~v~~~~~~~~~~~~----------~~I~iwd~~~~~~~~~l~~~~~~~-~~~~~s~~~d~~~la~sGs~-d- 238 (321)
... .-.++....+.+++..+ +.+.+||..+.+= ..+.....+. ...+... ++.++++ |+. +
T Consensus 85 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~ 160 (315)
T 4asc_A 85 LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-GESDPLPYVVYGHTVLSH--MDLVYVI-GGKGSD 160 (315)
T ss_dssp BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEE-CCBCTT
T ss_pred CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcE-eECCCCCCcccceeEEEE--CCEEEEE-eCCCCC
Confidence 211 11233344556655532 3688999977542 2222211111 1222233 3366665 543 2
Q ss_pred ----CcEEEEeeCCcceEEeec---cccceeEEEECCCCCEEEEEeCCCc----EEEEEEcCCCc
Q 020784 239 ----GQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKGT----LVRIFNTLDGT 292 (321)
Q Consensus 239 ----g~V~i~d~~~~~~~~l~~---H~~~V~~vafspdg~~las~S~Dgt----~IrIWd~~tg~ 292 (321)
..+.++|..+..-..+.. ....-.++.+ ++++++.|+.++. .+.+||..+.+
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 356677776554222221 1111122222 6777888876542 27788988764
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=65.62 E-value=38 Score=29.66 Aligned_cols=96 Identities=14% Similarity=0.071 Sum_probs=50.7
Q ss_pred EEEeeCCCce-EEEeecCCCCcEEEEeeCCcceEE---e----eccccceeEEEECCC----CCEEEEEeCC------Cc
Q 020784 220 CAVSQGVGSL-VLVCPGLQKGQVRVEHYASKRTKF---I----MAHDSRIACFALTQD----GQLLATSSTK------GT 281 (321)
Q Consensus 220 ~~~s~~~d~~-~la~sGs~dg~V~i~d~~~~~~~~---l----~~H~~~V~~vafspd----g~~las~S~D------gt 281 (321)
..+...+++. ++++ ...|.|++.+...+.... + .........|+|+|+ +.+.++-+.+ .+
T Consensus 21 ~~i~~~pdG~~l~V~--e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 21 WALAFLPDNHGMLIT--LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEECSTTCCEEEE--ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred EEEEEcCCCCEEEEE--eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 3445556667 7763 456888887643221111 1 112345789999995 6666654431 12
Q ss_pred EEEEEEcCCC--cE--EEE----Ee----CCCcceeEEEeecCceEEEe
Q 020784 282 LVRIFNTLDG--TL--LQE----EC----CPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 282 ~IrIWd~~tg--~~--i~~----~~----~g~~~~~~~~s~d~~~la~~ 318 (321)
.|..|++..+ ++ .+. +. ..|....+.|.+|| +|-++
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~ 146 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIA 146 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEE
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEE
Confidence 2556666533 11 111 11 12334567888898 45444
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=64.47 E-value=65 Score=27.24 Aligned_cols=108 Identities=11% Similarity=0.175 Sum_probs=51.1
Q ss_pred CCCEEEEEcCC--------cEEEEEecCCceeEEeeeecCCceEEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCc
Q 020784 96 DHGCFAAGTDH--------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (321)
Q Consensus 96 dg~~lasg~~~--------gv~vw~~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~ 167 (321)
++++++.|+.+ .+.+||..+.+........ ........... .+.+.+.+|........+.+.++|..+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKVYGHNVISH-NGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCEESCEEEEE-TTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-CcccccEEEEE-CCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56666666531 2446666665543222210 11111111122 34455555432111123679999998887
Q ss_pred EEEEEeeCC--ceeEEEEeCCeEEEEEC-------CEEEEEEcCCcE
Q 020784 168 CIGELSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLK 205 (321)
Q Consensus 168 ~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~I~iwd~~~~~ 205 (321)
....-.... .-.++....+.+++..+ +.+.+||+.+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 544322221 12233444556555532 367889987643
No 343
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=62.56 E-value=49 Score=27.47 Aligned_cols=98 Identities=12% Similarity=0.043 Sum_probs=55.7
Q ss_pred ceeEEEEeCCe-EEEEECCEEEEEEcCC-------cEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCCcEEEEeeC-
Q 020784 177 EVRSVKLRRDR-IIVVLEQKIFVYNFAD-------LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA- 247 (321)
Q Consensus 177 ~v~~v~~~~~~-~~~~~~~~I~iwd~~~-------~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg~V~i~d~~- 247 (321)
.+..+.|+++. +.++.++.+.-.+..+ +. -..+-. ......-++..++++.+.++ .||.|.-++--
T Consensus 42 ~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s-~t~IG~-~Gw~~F~a~~fD~~G~LYav---~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGR-AKKIGN-GGWNQFQFLFFDPNGYLYAV---SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHH-CEEEEC-SCGGGCSEEEECTTSCEEEE---ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEEeCCeEEEECCCCCCccccccc-ccEecc-cccccceEEEECCCCCEEEe---CCCEEEEeCCCc
Confidence 56688888764 4444667766655533 11 112211 11222345566778888873 55877655431
Q ss_pred Ccce-------EEeeccccceeEEEECCCCCEEEEEeCCCc
Q 020784 248 SKRT-------KFIMAHDSRIACFALTQDGQLLATSSTKGT 281 (321)
Q Consensus 248 ~~~~-------~~l~~H~~~V~~vafspdg~~las~S~Dgt 281 (321)
+..- ++-..--..+..|.|.|+|.+.|.. |+.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 1111 1111122568999999999988876 777
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=57.17 E-value=93 Score=26.67 Aligned_cols=73 Identities=10% Similarity=0.099 Sum_probs=34.7
Q ss_pred CCCEEEEEcC--CcEEEEEecC--CceeEEeeeec-CCceEEEEEecCCCeEEEEeCC-C--C-CCCCCCcEEEEeCCCC
Q 020784 96 DHGCFAAGTD--HGFRIYNCDP--FREIFRRDFER-GGGIGVVEMLFRCNILALVGGG-P--D-PQYPLNKVMIWDDHQS 166 (321)
Q Consensus 96 dg~~lasg~~--~gv~vw~~~~--~~~~~~~~~~~-~~~v~~v~~~~~~~~~~~~sg~-~--~-~~~~d~~v~iWD~~~~ 166 (321)
++++++.|+. +.+.+||..+ .+......+ . ...........+ +.+.+.+|. . . ....-+.+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~-p~~~R~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAF-PGGPRDQATSAFID-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCC-TTCCCBSCEEEEET-TEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCC-CCCcCccceEEEEC-CEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 6777777765 3466778764 332211111 1 011111112223 445555543 1 0 0011357899999887
Q ss_pred cEEE
Q 020784 167 RCIG 170 (321)
Q Consensus 167 ~~~~ 170 (321)
+...
T Consensus 97 ~W~~ 100 (357)
T 2uvk_A 97 SWVK 100 (357)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 7543
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=55.00 E-value=22 Score=36.16 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=28.1
Q ss_pred EEEEEecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEee
Q 020784 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (321)
Q Consensus 131 ~~v~~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (321)
..+....+...+.+++ .|+++||||+.+++++.+...
T Consensus 239 ~~~~~~~~~~~lftl~-------~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 239 ISMIFLSTYNVLVMLS-------LDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp EEEEEETTTTEEEEEE-------TTCEEEEEETTTTEEEEEEEC
T ss_pred EEEeecCCCcEEEEEE-------CCCEEEEEECCCCCeEeeecc
Confidence 3444455566777777 789999999999999887664
No 346
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=53.49 E-value=22 Score=34.90 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=27.3
Q ss_pred ecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeC
Q 020784 136 LFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR 175 (321)
Q Consensus 136 ~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~ 175 (321)
.++...+++++ .|+++|+||+++++++.+....
T Consensus 228 ~~~~~fLftL~-------~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 228 LFHERYLIVLT-------QNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp EETTTEEEEEE-------TTCEEEEEETTTTEEEEEEETT
T ss_pred ccCCcEEEEEE-------cCCeEEEEEcCCCceEEeeccc
Confidence 55677888888 7899999999999998887763
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=52.48 E-value=88 Score=28.52 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=26.1
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 258 DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 258 ~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
-...+.|+|.|+|+++++-...+. |++++..+|+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~-I~~~~~~~g~~ 60 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGK-ILRVNPESGSV 60 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCE-EEEECTTTCCE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCE-EEEEECCCCcE
Confidence 345789999999998887654456 87887666654
No 348
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=51.64 E-value=80 Score=27.79 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=28.8
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEEEcCCCcE
Q 020784 257 HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (321)
Q Consensus 257 H~~~V~~vafspdg~~las~S~Dgt~IrIWd~~tg~~ 293 (321)
.-...+.|+|.|||++|++--..|. |++++..+|+.
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~-I~~v~~~~g~~ 65 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEAT-ITRVDAKTGRK 65 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCE-EEEECTTTCCE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCE-EEEEECCCCcE
Confidence 3456789999999999887765888 88888766764
No 349
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=46.50 E-value=1.5e+02 Score=25.79 Aligned_cols=18 Identities=11% Similarity=0.112 Sum_probs=13.5
Q ss_pred cceeEEEECC-CCCEEEEE
Q 020784 259 SRIACFALTQ-DGQLLATS 276 (321)
Q Consensus 259 ~~V~~vafsp-dg~~las~ 276 (321)
.....++|+| +|.++++-
T Consensus 197 rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 197 RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp SEEEEEEEETTTTEEEEEE
T ss_pred cCccceEEECCCCCEEEEe
Confidence 3478999999 67777653
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=44.52 E-value=20 Score=37.27 Aligned_cols=34 Identities=18% Similarity=0.372 Sum_probs=26.1
Q ss_pred EecCCCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEEeeC
Q 020784 135 MLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR 175 (321)
Q Consensus 135 ~~~~~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~~~~ 175 (321)
...+...+.+++ .|+++||||+.+++++.+....
T Consensus 245 ~~~~~~~lftL~-------~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 245 FLSTYNVLVMLS-------LDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp EETTTTEEEEEB-------TTCEEEEEETTTTEEEEEEECC
T ss_pred ccCCccEEEEEe-------CCCEEEEEECCCCCeEEeechh
Confidence 344556666777 7899999999999998886653
No 351
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=37.80 E-value=45 Score=27.69 Aligned_cols=62 Identities=11% Similarity=0.088 Sum_probs=35.9
Q ss_pred EEeeCCCceEEEeecCCCCcEEEEeeCCcceEEeeccccc--------eeEEEECCCCCEEEEEeCCCcEEEEEEc
Q 020784 221 AVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSR--------IACFALTQDGQLLATSSTKGTLVRIFNT 288 (321)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg~V~i~d~~~~~~~~l~~H~~~--------V~~vafspdg~~las~S~Dgt~IrIWd~ 288 (321)
++..+|++.+.|+ .+|.+.-.+..+..-..+.+-... -.++.|.|+|.+-|+ + ||. |.-++-
T Consensus 45 ~laf~P~G~LYaV---~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~-dG~-iyr~~p 114 (236)
T 1tl2_A 45 FLFLSPGGELYGV---LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-S-KDK-LYKASP 114 (236)
T ss_dssp EEEECTTSCEEEE---ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-E-TTE-EEEESC
T ss_pred eEEECCCccEEEE---eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-C-CCE-EEEeCC
Confidence 4555557787774 556655544322111111111222 488999999998887 4 688 655554
No 352
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=36.18 E-value=2e+02 Score=24.41 Aligned_cols=108 Identities=7% Similarity=-0.086 Sum_probs=58.2
Q ss_pred EEEEEEcCCcEEEEEEeccCCCCceEEEeeCCCceEEEeec---CCCCcEEEEeeCCcceEEeeccccceeEEEECCCCC
Q 020784 195 KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG---LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQ 271 (321)
Q Consensus 195 ~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sG---s~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspdg~ 271 (321)
.|+..++...+. ..+... ....+++.+ ..|+++. ..+..|...++.......+..+.. .+|+++|+
T Consensus 89 ~Iy~i~~dg~~~-~~l~~~----~~~~~s~~g--~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~ 157 (302)
T 3s25_A 89 SLCRIKRNGHGS-TVLDPD----PCIYASLIG--NYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDR 157 (302)
T ss_dssp EEEEEETTSCCC-EEEECS----CEEEEEEET--TEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETT
T ss_pred eEEEEeCCCCcc-eEeecC----CccEEEEeC--CEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECC
Confidence 566667655442 222221 123566654 4454433 233445555665555555555533 46788888
Q ss_pred EEEEEeC-CCcEEEEEEcCCCcEEEEEeCCCcceeEEEeecCceEEE
Q 020784 272 LLATSST-KGTLVRIFNTLDGTLLQEECCPSISAQSGLWLSSAWLRV 317 (321)
Q Consensus 272 ~las~S~-Dgt~IrIWd~~tg~~i~~~~~g~~~~~~~~s~d~~~la~ 317 (321)
.|.=.+. ... |.+-++..+... .+..+.. ...+++++.||+.
T Consensus 158 ~iy~t~~g~~~-Iy~~~l~g~~~~-~l~~~~~--~~~~~P~g~~iy~ 200 (302)
T 3s25_A 158 YFYYNNPKNGQ-LYRYDTASQSEA-LFYDCNC--YKPVVLDDTNVYY 200 (302)
T ss_dssp EEEEECTTTCC-EEEEETTTTEEE-EEECSCE--EEEEEEETTEEEE
T ss_pred EEEEEeCCCce-EEEEECCCCCEE-EEeCCCc--cceeeecCCEEEE
Confidence 8875655 345 777777665543 3333322 2345678888764
No 353
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=36.06 E-value=3e+02 Score=26.44 Aligned_cols=149 Identities=10% Similarity=0.092 Sum_probs=76.2
Q ss_pred CCeEEEEeCCCCCCCCCCcEEEEeCCCCcEEEEE-e-----eCC--ceeEEEEe--CCeEEEEEC--------CEEEEEE
Q 020784 139 CNILALVGGGPDPQYPLNKVMIWDDHQSRCIGEL-S-----FRS--EVRSVKLR--RDRIIVVLE--------QKIFVYN 200 (321)
Q Consensus 139 ~~~~~~~sg~~~~~~~d~~v~iWD~~~~~~~~~~-~-----~~~--~v~~v~~~--~~~~~~~~~--------~~I~iwd 200 (321)
++.+.+.+|... ..-+.+.++|..+++....- . ... .-.++... .+.+++.++ +.+.+||
T Consensus 397 ~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred CCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 344555554321 12366899999888765432 2 111 11233333 556666532 3688899
Q ss_pred cCCcEEEEEEeccCCCCceEEEeeCCCceEEEeecCCCC--cEEEEeeCCcceEEeec------cccceeEEEECCC-CC
Q 020784 201 FADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG--QVRVEHYASKRTKFIMA------HDSRIACFALTQD-GQ 271 (321)
Q Consensus 201 ~~~~~~~~~l~~~~~~~~~~~~s~~~d~~~la~sGs~dg--~V~i~d~~~~~~~~l~~------H~~~V~~vafspd-g~ 271 (321)
..+.+= ..+.....+....+...-.++.++++ |+.++ .+.++|..+..=..+.. ....-.++++..+ ++
T Consensus 475 ~~t~~W-~~~~~~p~~R~~h~~~~~~~~~iyv~-GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 475 MKTREW-SMIKSLSHTRFRHSACSLPDGNVLIL-GGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTTEE-EECCCCSBCCBSCEEEECTTSCEEEE-CCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCCCcE-EECCCCCCCcccceEEEEcCCEEEEE-CCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 876432 22221111111112222114466665 55443 57778876654332221 1222234666655 77
Q ss_pred EEEEEeC--C-----CcEEEEEEcCCCc
Q 020784 272 LLATSST--K-----GTLVRIFNTLDGT 292 (321)
Q Consensus 272 ~las~S~--D-----gt~IrIWd~~tg~ 292 (321)
+++.|+. + +. +.+||+.+.+
T Consensus 553 iyv~GG~~~~~~~~~~~-v~~yd~~~~~ 579 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDK-AIIFKYDAEN 579 (695)
T ss_dssp EEEECCBCTTSSCBCCE-EEEEEECTTC
T ss_pred EEEECCcCCCCCeeeCc-EEEEEccCCc
Confidence 7888876 2 34 8889998877
No 354
>1wa7_B TIP, hypothetical 28.7 kDa protein in DHFR 3'region (ORF1); SH3 domain, ligand, tyrosine kinase, signal transduction, LYN; NMR {Saimiriine herpesvirus 2}
Probab=33.74 E-value=50 Score=16.75 Aligned_cols=12 Identities=25% Similarity=0.324 Sum_probs=6.0
Q ss_pred CCCCCCCCCCCC
Q 020784 17 DPNPNPNPNSNT 28 (321)
Q Consensus 17 ~~~~~~~~~~~~ 28 (321)
|||++|+-.++.
T Consensus 6 P~P~LPpRPaNL 17 (26)
T 1wa7_B 6 PTPPLPPRPANL 17 (26)
T ss_dssp CCCCCCCCTTST
T ss_pred CCCCCCCCcccc
Confidence 444455554554
No 355
>2kxc_B ESPF-like protein; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Escherichia coli}
Probab=28.76 E-value=37 Score=20.38 Aligned_cols=12 Identities=17% Similarity=0.113 Sum_probs=5.2
Q ss_pred CCCCCCCCCCCC
Q 020784 11 WPEPTPDPNPNP 22 (321)
Q Consensus 11 ~~~~~~~~~~~~ 22 (321)
=|.|||||+|..
T Consensus 31 rPa~P~Pt~~~~ 42 (48)
T 2kxc_B 31 APNWPAPTPPVQ 42 (48)
T ss_pred CCCCCCCCCccc
Confidence 344444444443
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.14 E-value=2.6e+02 Score=26.63 Aligned_cols=60 Identities=10% Similarity=-0.006 Sum_probs=39.5
Q ss_pred cceeEEEECCCCCEEE-EEeC----------CCcEEEEEEcCCCcEEEEEe--CCCcceeEEEeecCceEEEe
Q 020784 259 SRIACFALTQDGQLLA-TSST----------KGTLVRIFNTLDGTLLQEEC--CPSISAQSGLWLSSAWLRVL 318 (321)
Q Consensus 259 ~~V~~vafspdg~~la-s~S~----------Dgt~IrIWd~~tg~~i~~~~--~g~~~~~~~~s~d~~~la~~ 318 (321)
+....|+|.++|.+.+ |=.. ....|...+..+|++..-+. .+.....++|++|++.|-|+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4578899999999777 3111 01125555666788655443 23456778999999988775
No 357
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=22.08 E-value=5.1e+02 Score=24.55 Aligned_cols=131 Identities=13% Similarity=0.202 Sum_probs=75.5
Q ss_pred EEEEeCCCCcEEEEEeeC---Cce---------------eEEEE-eCC--eEEEEEC----CEEEEEEcCCcEEEE--EE
Q 020784 158 VMIWDDHQSRCIGELSFR---SEV---------------RSVKL-RRD--RIIVVLE----QKIFVYNFADLKLLH--QI 210 (321)
Q Consensus 158 v~iWD~~~~~~~~~~~~~---~~v---------------~~v~~-~~~--~~~~~~~----~~I~iwd~~~~~~~~--~l 210 (321)
|.|+|-.+|+.+.++... ..+ .+++. ..+ .++++-+ ..|..||+.++++.. ++
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~ 310 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTL 310 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEe
Confidence 889999999988877653 111 23332 222 2333332 368899998877644 34
Q ss_pred eccCC---------CCceEEEeeCCCc--eEEEeecC----CCCcEEEEeeCCcceEEeeccccceeEEEECCC--CCEE
Q 020784 211 ETIAN---------PKGLCAVSQGVGS--LVLVCPGL----QKGQVRVEHYASKRTKFIMAHDSRIACFALTQD--GQLL 273 (321)
Q Consensus 211 ~~~~~---------~~~~~~~s~~~d~--~~la~sGs----~dg~V~i~d~~~~~~~~l~~H~~~V~~vafspd--g~~l 273 (321)
..... .......-.++|+ .++. |+ .||+.. |.. -.+|...+.--.|.|+ |.-+
T Consensus 311 d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~--Gs~~iD~dG~~L-~st-------~~gHGDa~hv~dldP~r~GlEv 380 (591)
T 2zux_A 311 DSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIF--GSMAVDHDGKGM-YST-------GLGHGDALHTGDLDPGRPGLEV 380 (591)
T ss_dssp ETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEE--TTEEECTTSCEE-EEC-------SCCCCSCEEEECCCTTSSSCEE
T ss_pred cCCCCCcccccccCCCCCeeEeCCCCCCceEEE--eeeEECCCCCEe-eeC-------CCCCCCeeEEeecCCCCCCcEE
Confidence 33211 0122222334444 3332 44 233332 222 1389999999999988 4566
Q ss_pred EEEeCCC----cEEEEEEcCCCcEEEEEeC
Q 020784 274 ATSSTKG----TLVRIFNTLDGTLLQEECC 299 (321)
Q Consensus 274 as~S~Dg----t~IrIWd~~tg~~i~~~~~ 299 (321)
..+.+++ . ..+.|..+|+.+.....
T Consensus 381 ~~~~E~~~~~~G-~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 381 FQVHEDKNAKYG-LSFRDAATGKILWGVYA 409 (591)
T ss_dssp EEECCCTTSSCS-EEEEETTTCCEEEEECC
T ss_pred EEEecCCCCCCc-cEEEECCCCcEEEEcCC
Confidence 6676651 3 45789999999987754
No 358
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=22.01 E-value=79 Score=22.22 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=15.8
Q ss_pred cEEEEEEcCCCcEEEEEe
Q 020784 281 TLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 281 t~IrIWd~~tg~~i~~~~ 298 (321)
..|.|||+.+|..+.||-
T Consensus 17 E~V~IvNvnNG~RfeTYv 34 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTYV 34 (97)
T ss_dssp CEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCceEEEEE
Confidence 359999999999999984
No 359
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=21.83 E-value=1.5e+02 Score=22.05 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=35.4
Q ss_pred EEEEEEcCCcEEEEEEeccCCCCceEEEeeCCC---ceEEEeecCCCCcEEE--EeeCCcceEEeeccccceeEEEECCC
Q 020784 195 KIFVYNFADLKLLHQIETIANPKGLCAVSQGVG---SLVLVCPGLQKGQVRV--EHYASKRTKFIMAHDSRIACFALTQD 269 (321)
Q Consensus 195 ~I~iwd~~~~~~~~~l~~~~~~~~~~~~s~~~d---~~~la~sGs~dg~V~i--~d~~~~~~~~l~~H~~~V~~vafspd 269 (321)
+|.|+|. +++.++++.......+...|.+++. +..+. .|.+ ++++ .|........-......|.+|.+...
T Consensus 42 ~v~I~d~-~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~-~G~Y--~~~v~a~d~~g~~~~~~~~~~~~V~~V~~~~g 117 (138)
T 3c12_A 42 NFEITDA-NGTFVKQLSVPASAAGEVSFAWDGTDANGNRMA-AGKY--GITATQTDTAGAKSKLATYVDAPVDSVTIGSD 117 (138)
T ss_dssp EEEEECS-SCCEEEEEEEEESSSEEEEEEECSBCTTSCBCC-SEEE--EEEEEEEETTCCEEEECEEEEEEEEEEEEETT
T ss_pred EEEEEeC-CCCEEEEEEcCCcCCceEEEEECCcCCCCCCCC-CceE--EEEEEEEECCCCEEEEeeeEEEEEEEEEecCC
Confidence 4556664 4667777764434444566666542 12221 1211 2333 22222222222224566888888744
Q ss_pred CCEE
Q 020784 270 GQLL 273 (321)
Q Consensus 270 g~~l 273 (321)
+.+|
T Consensus 118 ~~~L 121 (138)
T 3c12_A 118 GLYL 121 (138)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4333
No 360
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=21.50 E-value=83 Score=22.08 Aligned_cols=19 Identities=21% Similarity=0.256 Sum_probs=16.1
Q ss_pred CcEEEEEEcCCCcEEEEEe
Q 020784 280 GTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 280 gt~IrIWd~~tg~~i~~~~ 298 (321)
+..|.|||+.+|..+.||-
T Consensus 17 ~E~V~IvNvnNG~Rf~TYv 35 (96)
T 1vc3_B 17 FEQVDIYDITNGARLTTYA 35 (96)
T ss_dssp TCEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECCCCceEEEEE
Confidence 3359999999999999884
No 361
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=20.78 E-value=86 Score=22.24 Aligned_cols=19 Identities=16% Similarity=0.183 Sum_probs=16.1
Q ss_pred CcEEEEEEcCCCcEEEEEe
Q 020784 280 GTLVRIFNTLDGTLLQEEC 298 (321)
Q Consensus 280 gt~IrIWd~~tg~~i~~~~ 298 (321)
+..|.|||+.+|..+.||-
T Consensus 17 ~E~V~I~NvnNG~Rf~TYv 35 (102)
T 3plx_B 17 YEKVQVVNVNNGARFETYT 35 (102)
T ss_dssp TCEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECCCCcEEEEEE
Confidence 3359999999999999884
Done!