BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020786
         (321 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O93937|PYR1_EMENI Protein pyrABCN OS=Emericella nidulans (strain FGSC A4 / ATCC 38163
           / CBS 112.46 / NRRL 194 / M139) GN=pyrABCN PE=3 SV=2
          Length = 2275

 Score = 36.6 bits (83), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 43  YNLKKCMKPKLEFFKSLGFAELQMAKFLSSQPYILER-SLENHIIPCIEILRRV 95
           YN      P L   K LGF++ Q+AKFLSS    + R  +E  IIP ++ +  V
Sbjct: 940 YNASTVTAPLLRQAKQLGFSDRQLAKFLSSNELAIRRLRVEAGIIPIVKQIDTV 993


>sp|Q914M5|Y005_SIFVH Uncharacterized protein 5 OS=Sulfolobus islandicus filamentous
           virus (isolate Iceland/Hveragerdi) GN=SIFV0005 PE=4 SV=1
          Length = 97

 Score = 32.7 bits (73), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 13/30 (43%), Positives = 22/30 (73%)

Query: 289 KQFIERIVKKYEHKVPKVVKAHQGKIKFQG 318
           ++ ++ I++KY+ KVP +VK  +GKIK  G
Sbjct: 56  REIVKEIIEKYKEKVPNIVKFKEGKIKSDG 85


>sp|Q6Q305|L_EMARV RNA-directed RNA polymerase L OS=European mountain ash
            ringspot-associated virus (isolate Sorbus aucuparia)
            GN=RdRp PE=2 SV=2
          Length = 2293

 Score = 32.0 bits (71), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 31/68 (45%)

Query: 253  SLEKRILPRCSVLQLLMSNKVITEDFSLTYMFKMTEKQFIERIVKKYEHKVPKVVKAHQG 312
            S  K +L RC  +++    + I +DF     FK T K     +++ ++H        +  
Sbjct: 1713 SFCKHVLQRCGDIKIYRDPEDIDDDFRKYIEFKYTLKDATMGLIQPHQHLAEYAFDVYNN 1772

Query: 313  KIKFQGFL 320
            K+ FQG +
Sbjct: 1773 KLIFQGLM 1780


>sp|O02108|CDC37_CAEEL Probable Hsp90 co-chaperone cdc37 OS=Caenorhabditis elegans
           GN=cdc-37 PE=2 SV=1
          Length = 370

 Score = 31.6 bits (70), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 16/134 (11%)

Query: 24  GFSDSQIKSITVKRPKFYVYNLKK--CMKPKLEFFKSL---------GFAELQMAKFLSS 72
            FS S+I  IT K+P+    + +    M    E  +SL         G    ++  FL+ 
Sbjct: 119 AFSTSRINKITEKKPQAPKTDEEDTHAMSTFFETHESLLEKMAVLKNGAKSTEL--FLAE 176

Query: 73  QPYILERSLENHIIPCIEILRRVLDTDENVLKAIRAGCLVLEYDIEKVLEPNIAILVNHG 132
            P++      N +   IE L   +D +E  +K +   C++++Y +E     N A+  N  
Sbjct: 177 HPHMASEYTANWL--TIEALNAAIDFNEEKMKTMAEQCIIIQYLLELSKSLN-AVATNTT 233

Query: 133 VPKSLVVKLMLIQP 146
           V K    K    +P
Sbjct: 234 VQKQFFKKFEAAEP 247


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.139    0.392 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,447,210
Number of Sequences: 539616
Number of extensions: 3896417
Number of successful extensions: 13879
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 13868
Number of HSP's gapped (non-prelim): 20
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)