Query 020792
Match_columns 321
No_of_seqs 260 out of 2606
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 05:11:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020792.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020792hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 1.8E-29 3.9E-34 224.2 29.3 280 32-311 4-309 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 3.7E-29 8E-34 235.4 21.7 267 34-301 162-474 (742)
3 KOG0254 Predicted transporter 100.0 1.1E-27 2.5E-32 220.8 29.0 287 34-320 40-345 (513)
4 TIGR00887 2A0109 phosphate:H+ 100.0 1.4E-27 3E-32 220.1 22.8 272 32-307 9-323 (502)
5 TIGR00879 SP MFS transporter, 100.0 1.9E-26 4.1E-31 210.9 28.3 282 34-315 23-327 (481)
6 PRK10077 xylE D-xylose transpo 100.0 4.2E-26 9E-31 209.3 29.8 268 36-309 9-308 (479)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.9 5.8E-26 1.3E-30 204.2 23.6 175 40-214 9-194 (412)
8 COG2271 UhpC Sugar phosphate p 99.9 1E-26 2.2E-31 198.7 16.7 267 32-320 22-301 (448)
9 COG2814 AraJ Arabinose efflux 99.9 8.4E-26 1.8E-30 195.2 22.3 172 39-210 13-189 (394)
10 TIGR00898 2A0119 cation transp 99.9 8.8E-26 1.9E-30 208.5 24.0 256 60-319 110-370 (505)
11 TIGR00891 2A0112 putative sial 99.9 7.3E-25 1.6E-29 196.5 24.7 180 36-215 9-194 (405)
12 PRK10642 proline/glycine betai 99.9 8.3E-25 1.8E-29 201.0 24.0 247 40-311 17-290 (490)
13 PRK09556 uhpT sugar phosphate 99.9 1E-25 2.2E-30 205.9 17.3 182 33-214 23-217 (467)
14 TIGR00903 2A0129 major facilit 99.9 3.2E-25 6.9E-30 195.8 19.4 213 58-307 10-227 (368)
15 PRK11663 regulatory protein Uh 99.9 5E-25 1.1E-29 199.5 20.8 171 44-214 28-203 (434)
16 PRK10406 alpha-ketoglutarate t 99.9 2.4E-24 5.2E-29 195.0 25.0 239 39-315 22-287 (432)
17 PRK03545 putative arabinose tr 99.9 2E-24 4.3E-29 193.1 22.2 156 57-212 27-187 (390)
18 PRK12307 putative sialic acid 99.9 2.3E-24 4.9E-29 195.0 22.3 252 41-316 20-275 (426)
19 PRK11551 putative 3-hydroxyphe 99.9 4.3E-24 9.2E-29 192.0 23.9 181 35-215 11-196 (406)
20 TIGR00895 2A0115 benzoate tran 99.9 9.5E-25 2.1E-29 195.2 19.4 268 45-317 23-295 (398)
21 PRK14995 methyl viologen resis 99.9 2.9E-24 6.2E-29 197.6 20.7 176 38-213 5-186 (495)
22 PLN00028 nitrate transmembrane 99.9 7.8E-24 1.7E-28 193.6 23.4 154 57-211 54-220 (476)
23 PRK10213 nepI ribonucleoside t 99.9 1.9E-23 4.2E-28 186.7 24.2 154 59-212 40-198 (394)
24 TIGR00894 2A0114euk Na(+)-depe 99.9 6.5E-24 1.4E-28 194.1 20.8 226 68-316 70-306 (465)
25 PRK15403 multidrug efflux syst 99.9 2.1E-23 4.5E-28 187.6 23.3 232 45-312 22-259 (413)
26 PRK09705 cynX putative cyanate 99.9 2.7E-23 5.9E-28 185.8 21.6 148 56-204 26-178 (393)
27 KOG0255 Synaptic vesicle trans 99.9 2.4E-23 5.2E-28 192.9 21.8 244 67-316 111-362 (521)
28 PF00083 Sugar_tr: Sugar (and 99.9 1.2E-28 2.6E-33 224.5 -14.8 242 74-317 46-299 (451)
29 TIGR00893 2A0114 d-galactonate 99.9 1.1E-23 2.4E-28 187.8 16.7 158 56-213 11-173 (399)
30 KOG2532 Permease of the major 99.9 3.3E-23 7.2E-28 186.1 19.4 230 66-318 65-305 (466)
31 PRK11273 glpT sn-glycerol-3-ph 99.9 6.8E-23 1.5E-27 186.6 20.7 168 46-214 36-213 (452)
32 TIGR00881 2A0104 phosphoglycer 99.9 6E-24 1.3E-28 188.7 13.2 164 50-213 6-175 (379)
33 PRK09952 shikimate transporter 99.9 3.1E-22 6.8E-27 181.4 23.4 175 40-215 23-225 (438)
34 TIGR00711 efflux_EmrB drug res 99.9 2E-23 4.3E-28 191.8 15.8 172 42-213 5-181 (485)
35 KOG1330 Sugar transporter/spin 99.9 6.5E-25 1.4E-29 189.4 5.0 173 40-212 34-212 (493)
36 PF07690 MFS_1: Major Facilita 99.9 6.9E-23 1.5E-27 180.2 17.6 159 54-212 11-175 (352)
37 TIGR00710 efflux_Bcr_CflA drug 99.9 2.7E-22 5.8E-27 178.8 21.6 159 54-212 20-183 (385)
38 PRK15075 citrate-proton sympor 99.9 4.6E-22 9.9E-27 180.3 23.1 159 40-198 16-200 (434)
39 PRK10091 MFS transport protein 99.9 3.2E-22 6.9E-27 178.4 21.4 164 49-212 13-181 (382)
40 PRK03893 putative sialic acid 99.9 1.7E-21 3.6E-26 179.7 26.7 177 39-215 20-200 (496)
41 PRK03699 putative transporter; 99.9 4E-22 8.6E-27 178.5 21.6 163 45-207 13-180 (394)
42 KOG2533 Permease of the major 99.9 9.5E-23 2.1E-27 183.6 17.4 257 38-311 44-313 (495)
43 TIGR00805 oat sodium-independe 99.9 7.3E-23 1.6E-27 192.1 15.8 259 47-318 41-377 (633)
44 TIGR00890 2A0111 Oxalate/Forma 99.9 1.4E-22 3E-27 179.8 15.9 154 58-212 22-180 (377)
45 PRK15402 multidrug efflux syst 99.9 8.7E-22 1.9E-26 177.0 20.8 179 35-213 9-192 (406)
46 TIGR00712 glpT glycerol-3-phos 99.9 5.9E-22 1.3E-26 179.7 19.4 175 39-214 27-211 (438)
47 TIGR00886 2A0108 nitrite extru 99.9 5.5E-22 1.2E-26 175.7 18.6 155 58-213 20-192 (366)
48 PRK11043 putative transporter; 99.9 2.3E-21 4.9E-26 174.0 21.3 158 55-212 22-183 (401)
49 TIGR00900 2A0121 H+ Antiporter 99.9 6.8E-22 1.5E-26 174.7 17.5 152 58-209 18-178 (365)
50 KOG0253 Synaptic vesicle trans 99.9 1.8E-21 3.9E-26 163.2 17.6 238 61-301 100-355 (528)
51 TIGR00892 2A0113 monocarboxyla 99.9 1.9E-21 4.2E-26 177.0 19.0 153 56-209 36-193 (455)
52 PRK10133 L-fucose transporter; 99.9 5E-21 1.1E-25 173.2 21.2 136 48-183 35-173 (438)
53 TIGR00806 rfc RFC reduced fola 99.9 2.9E-21 6.3E-26 170.0 18.6 158 58-216 45-209 (511)
54 PRK11102 bicyclomycin/multidru 99.9 2.6E-21 5.7E-26 172.1 18.1 156 57-212 9-169 (377)
55 PRK11652 emrD multidrug resist 99.9 8.5E-21 1.8E-25 169.9 21.4 157 57-213 26-187 (394)
56 PRK10473 multidrug efflux syst 99.9 9.1E-21 2E-25 169.6 20.5 154 59-212 23-181 (392)
57 PRK03633 putative MFS family t 99.9 1.8E-20 4E-25 167.0 22.1 142 45-186 12-153 (381)
58 PRK15034 nitrate/nitrite trans 99.9 1.7E-20 3.6E-25 167.8 21.5 200 58-301 53-281 (462)
59 PRK10504 putative transporter; 99.9 1.8E-20 3.9E-25 171.7 22.3 166 47-212 18-188 (471)
60 KOG0252 Inorganic phosphate tr 99.9 7.8E-22 1.7E-26 169.9 12.0 269 32-307 34-339 (538)
61 TIGR00896 CynX cyanate transpo 99.9 2E-20 4.3E-25 165.2 19.3 222 55-318 16-243 (355)
62 TIGR00885 fucP L-fucose:H+ sym 99.9 3.2E-20 7E-25 166.5 20.6 164 43-206 7-203 (410)
63 PRK05122 major facilitator sup 99.9 6.4E-20 1.4E-24 164.5 22.5 147 58-204 34-193 (399)
64 PRK11195 lysophospholipid tran 99.9 5E-20 1.1E-24 164.7 21.4 149 62-213 26-177 (393)
65 PRK12382 putative transporter; 99.9 1.4E-19 3.1E-24 161.9 24.3 144 57-200 33-189 (392)
66 PRK10054 putative transporter; 99.9 2.2E-20 4.7E-25 167.1 18.7 149 64-212 33-185 (395)
67 COG2223 NarK Nitrate/nitrite t 99.9 2.4E-20 5.2E-25 160.0 17.7 222 59-320 34-267 (417)
68 PRK11646 multidrug resistance 99.9 8.9E-20 1.9E-24 163.5 22.1 148 64-211 36-187 (400)
69 TIGR00897 2A0118 polyol permea 99.9 7.3E-20 1.6E-24 164.3 20.3 221 62-316 36-266 (402)
70 TIGR00899 2A0120 sugar efflux 99.8 2.3E-19 5E-24 159.4 19.6 162 52-213 10-180 (375)
71 TIGR00883 2A0106 metabolite-pr 99.8 3.9E-19 8.5E-24 158.6 20.4 143 71-213 27-194 (394)
72 cd06174 MFS The Major Facilita 99.8 4.2E-19 9.1E-24 155.8 20.2 163 46-208 6-172 (352)
73 PRK10489 enterobactin exporter 99.8 1.3E-19 2.7E-24 163.6 17.0 155 59-213 37-200 (417)
74 PRK09874 drug efflux system pr 99.8 1.2E-18 2.6E-23 156.6 21.9 163 49-212 24-196 (408)
75 TIGR00901 2A0125 AmpG-related 99.8 1.6E-18 3.4E-23 153.1 17.8 224 57-314 6-251 (356)
76 COG2807 CynX Cyanate permease 99.8 1.1E-17 2.4E-22 140.8 21.2 240 38-319 11-255 (395)
77 PF06609 TRI12: Fungal trichot 99.8 6.5E-19 1.4E-23 160.9 14.8 180 34-215 39-222 (599)
78 PRK10642 proline/glycine betai 99.8 1.3E-18 2.8E-23 160.0 16.2 170 65-234 277-459 (490)
79 KOG2615 Permease of the major 99.8 1.2E-18 2.6E-23 147.1 13.9 121 65-186 59-179 (451)
80 TIGR00902 2A0127 phenyl propri 99.8 6.7E-18 1.5E-22 150.6 19.1 230 49-316 14-249 (382)
81 PTZ00207 hypothetical protein; 99.8 6.1E-18 1.3E-22 155.4 19.1 167 60-228 48-226 (591)
82 COG0738 FucP Fucose permease [ 99.8 1.7E-17 3.7E-22 141.8 19.6 235 46-318 20-283 (422)
83 PRK11010 ampG muropeptide tran 99.8 1.4E-17 3E-22 152.9 20.7 155 57-213 30-198 (491)
84 PRK11128 putative 3-phenylprop 99.8 9.6E-18 2.1E-22 149.6 18.7 222 55-316 20-249 (382)
85 PRK11902 ampG muropeptide tran 99.8 1.3E-17 2.8E-22 149.7 18.9 164 48-213 8-185 (402)
86 KOG2504 Monocarboxylate transp 99.8 3.3E-18 7.2E-23 155.8 14.4 253 59-319 66-345 (509)
87 TIGR00924 yjdL_sub1_fam amino 99.8 6E-17 1.3E-21 148.1 21.0 145 64-208 36-190 (475)
88 TIGR00882 2A0105 oligosacchari 99.8 4.4E-17 9.5E-22 146.0 18.9 148 60-209 23-182 (396)
89 PRK15011 sugar efflux transpor 99.8 1.7E-16 3.7E-21 142.1 22.2 149 64-213 41-198 (393)
90 PRK06814 acylglycerophosphoeth 99.8 3E-17 6.6E-22 165.5 19.0 221 65-317 42-271 (1140)
91 PRK10207 dipeptide/tripeptide 99.8 3.6E-17 7.8E-22 149.7 17.1 172 35-209 14-193 (489)
92 PRK08633 2-acyl-glycerophospho 99.8 9E-17 1.9E-21 162.4 21.3 122 65-186 36-162 (1146)
93 KOG3764 Vesicular amine transp 99.7 3.2E-18 6.9E-23 145.4 8.1 143 67-209 99-246 (464)
94 PRK09528 lacY galactoside perm 99.7 2.8E-16 6.1E-21 141.9 18.3 145 64-210 36-191 (420)
95 PRK15462 dipeptide/tripeptide 99.7 2.8E-15 6.1E-20 135.7 17.1 143 64-206 35-185 (493)
96 PRK09584 tppB putative tripept 99.7 3.5E-15 7.5E-20 137.3 17.8 142 63-204 46-195 (500)
97 TIGR01301 GPH_sucrose GPH fami 99.7 3E-15 6.4E-20 135.1 16.3 175 35-213 4-222 (477)
98 PRK15011 sugar efflux transpor 99.6 1.6E-14 3.5E-19 129.3 18.7 147 64-211 242-392 (393)
99 TIGR02718 sider_RhtX_FptX side 99.6 1.6E-14 3.4E-19 129.3 17.8 236 42-315 4-251 (390)
100 TIGR00880 2_A_01_02 Multidrug 99.6 2.5E-15 5.4E-20 113.9 10.4 132 80-211 4-140 (141)
101 TIGR01299 synapt_SV2 synaptic 99.6 7.2E-15 1.6E-19 139.2 14.8 138 76-213 597-737 (742)
102 PF03137 OATP: Organic Anion T 99.6 5.6E-17 1.2E-21 148.9 -0.2 261 52-320 16-354 (539)
103 TIGR00889 2A0110 nucleoside tr 99.6 4.8E-14 1E-18 127.1 18.5 152 59-213 23-183 (418)
104 TIGR00792 gph sugar (Glycoside 99.6 1.6E-14 3.5E-19 131.1 14.0 152 61-212 22-197 (437)
105 PF05977 MFS_3: Transmembrane 99.6 1.7E-13 3.6E-18 125.7 20.1 171 32-209 10-189 (524)
106 KOG3626 Organic anion transpor 99.6 1.1E-14 2.5E-19 134.4 11.6 266 42-320 100-441 (735)
107 TIGR00890 2A0111 Oxalate/Forma 99.6 2.8E-14 6E-19 126.5 13.5 141 63-203 229-375 (377)
108 PRK09528 lacY galactoside perm 99.6 9.7E-15 2.1E-19 131.9 10.7 145 68-212 256-406 (420)
109 TIGR00899 2A0120 sugar efflux 99.6 1.6E-13 3.4E-18 121.9 17.5 147 64-211 225-375 (375)
110 PRK11551 putative 3-hydroxyphe 99.6 3.4E-14 7.3E-19 127.8 13.1 149 61-209 242-395 (406)
111 cd06174 MFS The Major Facilita 99.5 2E-13 4.4E-18 119.7 15.7 151 59-209 195-351 (352)
112 PRK05122 major facilitator sup 99.5 4.2E-13 9.1E-18 120.4 17.1 144 67-212 244-391 (399)
113 KOG2325 Predicted transporter/ 99.5 6.8E-13 1.5E-17 118.0 17.8 151 62-213 58-233 (488)
114 PRK03699 putative transporter; 99.5 4.1E-13 8.8E-18 120.3 16.5 147 64-211 231-381 (394)
115 TIGR00889 2A0110 nucleoside tr 99.5 1.6E-13 3.5E-18 123.7 13.7 140 73-212 250-405 (418)
116 PRK09952 shikimate transporter 99.5 3.7E-13 7.9E-18 122.2 15.6 149 64-212 276-435 (438)
117 PRK12382 putative transporter; 99.5 1.1E-12 2.5E-17 117.3 16.2 141 65-207 242-386 (392)
118 PRK09556 uhpT sugar phosphate 99.5 9E-13 1.9E-17 120.7 15.5 150 60-209 279-448 (467)
119 PRK10077 xylE D-xylose transpo 99.5 2.2E-12 4.8E-17 118.5 17.7 154 59-212 291-460 (479)
120 TIGR00902 2A0127 phenyl propri 99.5 1.5E-12 3.2E-17 116.2 16.0 140 65-206 231-375 (382)
121 TIGR00883 2A0106 metabolite-pr 99.5 4.1E-13 8.9E-18 119.7 12.0 136 65-200 246-391 (394)
122 KOG2563 Permease of the major 99.5 5E-12 1.1E-16 109.9 17.8 155 31-186 37-199 (480)
123 PF03825 Nuc_H_symport: Nucleo 99.5 6.3E-12 1.4E-16 112.0 18.9 222 59-315 22-251 (400)
124 TIGR00892 2A0113 monocarboxyla 99.5 5E-13 1.1E-17 121.9 12.2 144 61-204 263-415 (455)
125 TIGR00893 2A0114 d-galactonate 99.5 1.1E-12 2.5E-17 116.8 14.2 142 64-206 241-395 (399)
126 TIGR00879 SP MFS transporter, 99.5 1.8E-12 3.9E-17 118.6 15.3 155 58-212 303-473 (481)
127 PRK09874 drug efflux system pr 99.5 5.4E-13 1.2E-17 119.9 11.4 133 76-208 260-396 (408)
128 PRK03633 putative MFS family t 99.4 5.7E-12 1.2E-16 112.4 16.5 145 62-209 223-371 (381)
129 PRK10489 enterobactin exporter 99.4 2.5E-12 5.5E-17 116.1 14.4 148 65-212 250-402 (417)
130 PRK09705 cynX putative cyanate 99.4 1.2E-11 2.7E-16 110.7 17.8 150 62-213 228-385 (393)
131 PRK03545 putative arabinose tr 99.4 1E-11 2.3E-16 111.1 16.9 144 63-208 230-378 (390)
132 PRK03893 putative sialic acid 99.4 9.2E-13 2E-17 121.6 10.0 138 61-198 297-441 (496)
133 TIGR00887 2A0109 phosphate:H+ 99.4 1.1E-11 2.3E-16 114.7 16.6 153 61-213 310-492 (502)
134 TIGR00788 fbt folate/biopterin 99.4 1E-11 2.3E-16 113.4 16.2 151 60-212 47-211 (468)
135 TIGR00891 2A0112 putative sial 99.4 4.4E-12 9.6E-17 113.7 13.4 123 64-186 264-387 (405)
136 TIGR00898 2A0119 cation transp 99.4 8.1E-12 1.7E-16 115.6 14.9 136 78-213 359-498 (505)
137 TIGR00897 2A0118 polyol permea 99.4 1.9E-11 4.1E-16 109.8 15.9 147 61-209 244-400 (402)
138 PRK10429 melibiose:sodium symp 99.4 6.6E-12 1.4E-16 115.1 12.9 150 63-212 31-204 (473)
139 TIGR00895 2A0115 benzoate tran 99.4 4.6E-12 9.9E-17 113.2 11.5 127 60-186 271-397 (398)
140 PLN00028 nitrate transmembrane 99.4 6.2E-12 1.3E-16 115.4 12.5 146 64-210 278-433 (476)
141 TIGR00882 2A0105 oligosacchari 99.4 1.4E-11 3E-16 110.5 13.8 137 70-206 250-391 (396)
142 PF11700 ATG22: Vacuole efflux 99.4 4.5E-11 9.8E-16 108.7 17.0 150 63-212 306-470 (477)
143 PRK10406 alpha-ketoglutarate t 99.4 3.4E-11 7.5E-16 109.2 16.2 148 64-211 269-425 (432)
144 PRK11273 glpT sn-glycerol-3-ph 99.3 4.4E-11 9.5E-16 109.2 16.7 144 64-207 279-432 (452)
145 PRK09669 putative symporter Ya 99.3 2.2E-11 4.7E-16 110.9 14.6 151 62-212 33-207 (444)
146 PRK10504 putative transporter; 99.3 2.7E-11 5.8E-16 111.2 15.0 126 61-186 283-412 (471)
147 PRK12307 putative sialic acid 99.3 2E-11 4.4E-16 110.4 13.7 126 61-186 253-380 (426)
148 COG3104 PTR2 Dipeptide/tripept 99.3 1.4E-11 3.1E-16 108.7 11.7 175 33-210 19-206 (498)
149 PF05631 DUF791: Protein of un 99.3 9.2E-11 2E-15 100.1 16.2 152 60-212 55-219 (354)
150 PRK11663 regulatory protein Uh 99.3 4.7E-11 1E-15 108.4 15.2 144 64-207 269-421 (434)
151 PRK11128 putative 3-phenylprop 99.3 9.3E-11 2E-15 104.6 16.7 138 65-204 231-373 (382)
152 KOG0569 Permease of the major 99.3 9.7E-11 2.1E-15 105.1 16.2 153 60-213 291-458 (485)
153 PF06813 Nodulin-like: Nodulin 99.3 7.5E-11 1.6E-15 97.3 14.3 152 59-212 22-184 (250)
154 TIGR00900 2A0121 H+ Antiporter 99.3 8.7E-12 1.9E-16 110.1 9.5 125 62-186 234-360 (365)
155 PRK11010 ampG muropeptide tran 99.3 8.6E-11 1.9E-15 108.2 16.1 151 62-212 246-405 (491)
156 PF13347 MFS_2: MFS/sugar tran 99.3 1.8E-11 3.9E-16 110.9 11.2 151 61-211 24-200 (428)
157 COG2814 AraJ Arabinose efflux 99.3 1.1E-10 2.3E-15 101.9 14.8 148 59-208 232-384 (394)
158 TIGR00792 gph sugar (Glycoside 99.3 2.1E-10 4.4E-15 104.2 17.5 118 68-186 252-377 (437)
159 KOG0253 Synaptic vesicle trans 99.3 3E-11 6.5E-16 102.4 10.0 132 81-212 388-521 (528)
160 KOG4686 Predicted sugar transp 99.3 7.1E-12 1.5E-16 102.5 6.0 148 36-183 41-192 (459)
161 PF05977 MFS_3: Transmembrane 99.3 1.9E-10 4E-15 105.8 15.7 146 61-206 240-390 (524)
162 PRK15075 citrate-proton sympor 99.2 3.5E-10 7.6E-15 102.7 16.6 127 60-186 259-391 (434)
163 TIGR00712 glpT glycerol-3-phos 99.2 1.3E-10 2.8E-15 105.7 13.5 149 64-212 277-436 (438)
164 PRK08633 2-acyl-glycerophospho 99.2 2.2E-10 4.8E-15 116.2 15.9 136 64-199 258-399 (1146)
165 PRK10054 putative transporter; 99.2 1.6E-10 3.5E-15 103.5 13.2 139 67-206 237-380 (395)
166 COG2270 Permeases of the major 99.2 1.5E-10 3.3E-15 100.2 11.8 148 65-212 279-431 (438)
167 TIGR02718 sider_RhtX_FptX side 99.2 1.2E-09 2.6E-14 97.8 17.9 141 65-205 234-386 (390)
168 PRK11462 putative transporter; 99.2 1.8E-09 3.9E-14 98.6 19.3 143 64-206 35-200 (460)
169 KOG2504 Monocarboxylate transp 99.2 1.8E-10 3.9E-15 105.4 12.0 154 57-210 316-476 (509)
170 COG2271 UhpC Sugar phosphate p 99.2 9.8E-11 2.1E-15 101.3 9.5 143 64-206 278-430 (448)
171 TIGR00881 2A0104 phosphoglycer 99.2 7.9E-11 1.7E-15 104.4 9.0 128 64-191 242-378 (379)
172 PRK09848 glucuronide transport 99.2 1E-09 2.3E-14 100.0 16.4 123 63-185 33-173 (448)
173 PF01306 LacY_symp: LacY proto 99.2 1.8E-10 3.8E-15 101.5 10.7 143 65-209 34-187 (412)
174 PRK10473 multidrug efflux syst 99.2 4.6E-10 9.9E-15 100.5 13.7 131 65-197 230-361 (392)
175 PRK15402 multidrug efflux syst 99.2 1.5E-09 3.3E-14 97.7 16.7 137 65-202 242-387 (406)
176 PRK09848 glucuronide transport 99.2 2.8E-09 6E-14 97.3 18.5 121 65-185 255-384 (448)
177 TIGR01272 gluP glucose/galacto 99.2 1.6E-09 3.5E-14 93.7 15.7 124 68-194 172-299 (310)
178 PRK11902 ampG muropeptide tran 99.2 9.6E-10 2.1E-14 98.8 14.6 147 63-209 234-389 (402)
179 TIGR00894 2A0114euk Na(+)-depe 99.2 6.9E-10 1.5E-14 101.7 13.8 148 61-209 283-449 (465)
180 TIGR00710 efflux_Bcr_CflA drug 99.1 1E-09 2.2E-14 97.8 14.5 118 65-183 233-356 (385)
181 TIGR00711 efflux_EmrB drug res 99.1 4.3E-10 9.2E-15 103.5 12.2 123 64-186 281-407 (485)
182 PRK10091 MFS transport protein 99.1 1.8E-09 4E-14 96.3 15.5 143 62-206 223-372 (382)
183 TIGR02332 HpaX 4-hydroxyphenyl 99.1 4.7E-10 1E-14 101.1 11.8 139 60-198 263-409 (412)
184 PF03825 Nuc_H_symport: Nucleo 99.1 1.8E-09 3.9E-14 96.3 15.3 148 65-212 233-398 (400)
185 PF01770 Folate_carrier: Reduc 99.1 4E-09 8.7E-14 92.6 16.8 155 59-214 24-186 (412)
186 TIGR00901 2A0125 AmpG-related 99.1 7E-10 1.5E-14 98.0 12.5 111 63-173 233-355 (356)
187 PRK10213 nepI ribonucleoside t 99.1 3.7E-09 7.9E-14 94.8 17.2 140 62-202 240-383 (394)
188 TIGR00896 CynX cyanate transpo 99.1 2.5E-09 5.3E-14 94.5 15.5 125 61-186 219-345 (355)
189 TIGR00903 2A0129 major facilit 99.1 1.8E-09 3.9E-14 95.7 14.6 147 61-211 214-366 (368)
190 PRK10429 melibiose:sodium symp 99.1 3.6E-09 7.7E-14 97.2 17.0 122 65-186 257-390 (473)
191 PRK06814 acylglycerophosphoeth 99.1 9.1E-10 2E-14 111.7 14.2 135 64-198 251-410 (1140)
192 PF01306 LacY_symp: LacY proto 99.1 1.1E-09 2.5E-14 96.4 12.4 146 67-212 252-403 (412)
193 PF07690 MFS_1: Major Facilita 99.1 2.4E-10 5.2E-15 100.4 8.2 121 60-180 227-352 (352)
194 KOG4686 Predicted sugar transp 99.1 1.3E-09 2.8E-14 89.5 11.6 121 64-186 290-411 (459)
195 PRK14995 methyl viologen resis 99.1 1.7E-09 3.7E-14 99.9 13.4 123 64-186 285-410 (495)
196 COG2211 MelB Na+/melibiose sym 99.1 1E-09 2.3E-14 97.7 11.2 148 65-212 39-210 (467)
197 PRK11195 lysophospholipid tran 99.1 4.4E-09 9.6E-14 94.2 15.4 133 64-197 231-367 (393)
198 PRK11646 multidrug resistance 99.1 3.4E-09 7.3E-14 95.2 14.5 126 61-186 230-356 (400)
199 COG2223 NarK Nitrate/nitrite t 99.1 1.4E-09 3E-14 94.2 11.1 145 64-209 244-400 (417)
200 PRK11102 bicyclomycin/multidru 99.0 2.3E-08 5E-13 89.0 17.9 120 65-185 221-345 (377)
201 PF13347 MFS_2: MFS/sugar tran 99.0 9.9E-09 2.1E-13 93.1 15.6 119 67-186 254-381 (428)
202 PF11700 ATG22: Vacuole efflux 99.0 1.2E-07 2.6E-12 86.5 21.3 139 75-213 71-251 (477)
203 PRK10133 L-fucose transporter; 99.0 9.3E-09 2E-13 93.4 14.1 130 66-198 287-421 (438)
204 COG2211 MelB Na+/melibiose sym 99.0 7.1E-08 1.5E-12 86.2 19.0 121 65-185 263-392 (467)
205 PRK15034 nitrate/nitrite trans 99.0 1.8E-08 3.8E-13 90.9 15.0 136 73-208 285-452 (462)
206 PRK09669 putative symporter Ya 98.9 1.3E-07 2.7E-12 86.3 19.1 114 73-186 263-385 (444)
207 KOG0252 Inorganic phosphate tr 98.9 1.1E-09 2.3E-14 95.8 4.7 174 40-213 305-501 (538)
208 TIGR01272 gluP glucose/galacto 98.9 2.3E-08 5E-13 86.5 12.9 88 122-209 5-112 (310)
209 COG2807 CynX Cyanate permease 98.9 1.2E-07 2.7E-12 80.8 16.0 169 35-208 208-383 (395)
210 KOG2816 Predicted transporter 98.9 1.7E-08 3.7E-13 91.1 11.4 126 82-212 70-202 (463)
211 PRK11043 putative transporter; 98.9 1.8E-07 4E-12 84.0 17.6 124 62-186 226-354 (401)
212 COG0477 ProP Permeases of the 98.9 7.1E-08 1.5E-12 82.4 14.3 145 56-200 19-175 (338)
213 TIGR00926 2A1704 Peptide:H+ sy 98.9 4E-07 8.7E-12 85.9 20.0 145 63-207 12-179 (654)
214 TIGR00788 fbt folate/biopterin 98.9 3.9E-08 8.4E-13 90.1 13.0 146 66-211 280-447 (468)
215 PF00083 Sugar_tr: Sugar (and 98.8 3.3E-11 7.1E-16 110.0 -7.6 151 60-212 274-439 (451)
216 TIGR00886 2A0108 nitrite extru 98.8 1.5E-08 3.3E-13 89.7 7.7 111 64-175 251-365 (366)
217 KOG0254 Predicted transporter 98.8 5.2E-07 1.1E-11 83.8 18.0 154 58-212 314-486 (513)
218 PRK11652 emrD multidrug resist 98.8 3.1E-07 6.8E-12 82.3 16.1 122 65-187 234-358 (394)
219 PF03209 PUCC: PUCC protein; 98.8 5.6E-07 1.2E-11 78.5 15.8 121 65-186 6-148 (403)
220 KOG2532 Permease of the major 98.8 7.7E-08 1.7E-12 87.2 11.0 164 46-209 265-446 (466)
221 TIGR00924 yjdL_sub1_fam amino 98.7 3.9E-07 8.5E-12 83.7 15.3 132 76-207 314-465 (475)
222 PRK09584 tppB putative tripept 98.7 7.8E-07 1.7E-11 82.2 16.2 130 76-205 318-474 (500)
223 PRK11462 putative transporter; 98.7 8.7E-07 1.9E-11 81.1 15.8 112 73-184 262-382 (460)
224 PF03092 BT1: BT1 family; Int 98.7 2.7E-07 5.9E-12 83.5 11.7 150 61-211 12-176 (433)
225 PF06779 DUF1228: Protein of u 98.6 1.2E-07 2.6E-12 63.9 6.6 75 56-130 9-83 (85)
226 PF03209 PUCC: PUCC protein; 98.6 1.6E-06 3.4E-11 75.7 14.8 145 62-206 232-394 (403)
227 TIGR00885 fucP L-fucose:H+ sym 98.6 1.1E-06 2.4E-11 79.2 14.5 114 70-186 265-378 (410)
228 KOG3764 Vesicular amine transp 98.6 8.4E-08 1.8E-12 82.7 5.7 153 54-206 285-450 (464)
229 KOG3762 Predicted transporter 98.6 1.2E-07 2.6E-12 84.7 6.4 144 65-208 397-545 (618)
230 PRK10207 dipeptide/tripeptide 98.5 3.6E-06 7.8E-11 77.5 14.7 131 76-206 311-472 (489)
231 PF12832 MFS_1_like: MFS_1 lik 98.4 1E-06 2.2E-11 58.9 6.8 60 54-113 15-74 (77)
232 PF05978 UNC-93: Ion channel r 98.4 8E-06 1.7E-10 62.5 12.4 112 71-183 34-145 (156)
233 TIGR00769 AAA ADP/ATP carrier 98.4 0.00012 2.6E-09 66.5 21.3 123 64-186 28-188 (472)
234 COG0738 FucP Fucose permease [ 98.4 1E-05 2.2E-10 70.4 13.3 125 59-186 256-381 (422)
235 COG2270 Permeases of the major 98.4 2E-05 4.4E-10 69.0 15.2 105 74-178 58-166 (438)
236 PRK15403 multidrug efflux syst 98.4 2.6E-05 5.7E-10 70.4 16.4 133 65-198 245-385 (413)
237 TIGR01301 GPH_sucrose GPH fami 98.4 1.5E-05 3.3E-10 72.5 14.7 137 77-213 308-475 (477)
238 PF06609 TRI12: Fungal trichot 98.2 1.6E-05 3.4E-10 73.9 11.9 140 75-214 350-558 (599)
239 KOG2816 Predicted transporter 98.2 0.00014 2.9E-09 66.2 17.4 122 64-186 267-389 (463)
240 PTZ00207 hypothetical protein; 98.2 1.4E-05 3.1E-10 74.4 10.5 142 64-207 378-549 (591)
241 KOG2533 Permease of the major 98.2 1.1E-05 2.5E-10 73.6 9.5 142 52-193 286-439 (495)
242 KOG0255 Synaptic vesicle trans 98.1 6.5E-05 1.4E-09 70.0 14.4 131 83-213 359-496 (521)
243 KOG0637 Sucrose transporter an 98.1 1.3E-05 2.8E-10 70.6 7.6 151 35-189 32-205 (498)
244 PF06963 FPN1: Ferroportin1 (F 97.9 0.0025 5.5E-08 57.3 19.7 42 72-113 36-77 (432)
245 KOG3098 Uncharacterized conser 97.9 0.0013 2.8E-08 59.3 17.3 103 80-183 56-158 (461)
246 PRK15462 dipeptide/tripeptide 97.9 0.0007 1.5E-08 62.1 15.3 111 76-186 310-437 (493)
247 KOG2615 Permease of the major 97.8 0.00012 2.7E-09 63.2 8.5 121 66-186 289-411 (451)
248 KOG3098 Uncharacterized conser 97.7 0.0045 9.7E-08 55.9 16.7 109 76-185 281-410 (461)
249 COG3202 ATP/ADP translocase [E 97.7 0.01 2.2E-07 53.4 18.6 122 65-186 49-207 (509)
250 PF03219 TLC: TLC ATP/ADP tran 97.6 0.026 5.6E-07 51.9 21.1 115 72-186 56-203 (491)
251 PF02487 CLN3: CLN3 protein; 97.6 0.00072 1.6E-08 59.9 10.5 116 69-186 276-394 (402)
252 KOG3574 Acetyl-CoA transporter 97.6 0.0061 1.3E-07 53.1 15.2 136 45-183 37-189 (510)
253 PF00854 PTR2: POT family; In 97.5 0.0013 2.8E-08 58.6 10.6 104 105-208 2-121 (372)
254 PF03092 BT1: BT1 family; Int 97.4 0.0013 2.8E-08 59.8 10.5 142 71-212 252-415 (433)
255 KOG1237 H+/oligopeptide sympor 97.4 0.0058 1.3E-07 57.2 14.9 149 58-206 57-241 (571)
256 PF06963 FPN1: Ferroportin1 (F 97.3 0.0072 1.6E-07 54.5 13.9 124 62-186 282-415 (432)
257 PRK03612 spermidine synthase; 97.3 0.024 5.2E-07 52.7 17.6 119 65-185 41-167 (521)
258 KOG4332 Predicted sugar transp 97.2 0.00081 1.7E-08 55.6 5.9 97 59-156 57-154 (454)
259 KOG3810 Micronutrient transpor 97.2 0.0036 7.8E-08 53.7 9.7 152 62-214 28-187 (433)
260 PF02487 CLN3: CLN3 protein; 97.2 0.0074 1.6E-07 53.6 12.1 130 77-211 62-197 (402)
261 COG3104 PTR2 Dipeptide/tripept 97.1 0.01 2.2E-07 53.6 12.4 132 75-206 325-483 (498)
262 PF13000 Acatn: Acetyl-coenzym 97.0 0.033 7.2E-07 50.4 13.8 139 45-183 6-174 (544)
263 KOG3762 Predicted transporter 96.9 0.00075 1.6E-08 61.1 3.1 75 49-123 21-96 (618)
264 KOG2325 Predicted transporter/ 96.4 0.0054 1.2E-07 55.6 5.0 69 135-203 396-468 (488)
265 KOG2563 Permease of the major 96.3 0.015 3.2E-07 51.9 7.3 104 66-170 293-402 (480)
266 TIGR00939 2a57 Equilibrative N 96.2 0.18 3.9E-06 45.9 13.9 106 77-183 310-428 (437)
267 TIGR00939 2a57 Equilibrative N 96.2 0.12 2.7E-06 46.9 12.7 78 81-159 52-137 (437)
268 KOG1330 Sugar transporter/spin 96.1 0.0055 1.2E-07 54.7 3.3 122 65-186 274-409 (493)
269 PF03137 OATP: Organic Anion T 95.5 0.0037 7.9E-08 58.3 0.0 76 42-117 308-387 (539)
270 TIGR00805 oat sodium-independe 95.4 0.046 9.9E-07 52.3 6.8 57 64-120 356-415 (633)
271 KOG1479 Nucleoside transporter 95.0 0.87 1.9E-05 40.6 13.0 34 126-160 116-149 (406)
272 KOG1479 Nucleoside transporter 94.2 0.82 1.8E-05 40.7 11.1 107 74-182 282-398 (406)
273 PF01770 Folate_carrier: Reduc 94.2 1.1 2.3E-05 40.3 11.9 97 75-171 286-384 (412)
274 KOG3097 Predicted membrane pro 93.3 0.93 2E-05 39.1 9.4 73 83-156 67-139 (390)
275 PF01733 Nucleoside_tran: Nucl 91.6 0.054 1.2E-06 46.9 0.0 105 79-183 187-304 (309)
276 COG4262 Predicted spermidine s 88.2 13 0.00027 32.8 11.4 142 33-180 8-160 (508)
277 PF07672 MFS_Mycoplasma: Mycop 87.8 0.6 1.3E-05 38.8 3.3 51 159-209 2-61 (267)
278 COG5336 Uncharacterized protei 86.0 3.8 8.2E-05 28.8 5.9 32 78-109 46-78 (116)
279 TIGR00806 rfc RFC reduced fola 85.5 9.4 0.0002 35.3 9.8 96 77-172 301-398 (511)
280 TIGR00880 2_A_01_02 Multidrug 83.8 9.2 0.0002 27.6 8.0 43 75-117 88-130 (141)
281 KOG3626 Organic anion transpor 82.5 0.85 1.9E-05 43.8 2.1 78 43-120 396-477 (735)
282 KOG3880 Predicted small molecu 81.7 5.8 0.00013 34.2 6.5 115 67-186 280-401 (409)
283 KOG4332 Predicted sugar transp 80.8 24 0.00053 30.0 9.6 130 76-205 284-426 (454)
284 PF07672 MFS_Mycoplasma: Mycop 80.7 33 0.00071 28.8 10.4 100 76-176 143-252 (267)
285 KOG3880 Predicted small molecu 79.5 5.1 0.00011 34.5 5.4 132 76-208 64-197 (409)
286 KOG0637 Sucrose transporter an 79.0 4.3 9.2E-05 36.9 5.1 70 77-146 335-404 (498)
287 COG1422 Predicted membrane pro 77.8 33 0.00071 27.3 9.0 23 174-197 33-55 (201)
288 KOG3810 Micronutrient transpor 74.1 9.8 0.00021 33.5 5.8 95 77-171 274-370 (433)
289 PF06912 DUF1275: Protein of u 73.7 46 0.00099 26.8 15.0 25 164-188 167-191 (209)
290 PF07857 DUF1632: CEO family ( 73.3 22 0.00047 29.8 7.5 16 288-303 194-209 (254)
291 PF11947 DUF3464: Protein of u 72.5 28 0.00061 26.5 7.3 50 127-179 97-146 (153)
292 PF12832 MFS_1_like: MFS_1 lik 70.2 9.5 0.00021 25.2 4.0 34 286-319 14-47 (77)
293 PRK10263 DNA translocase FtsK; 69.6 59 0.0013 34.0 10.8 24 171-194 143-166 (1355)
294 PF13000 Acatn: Acetyl-coenzym 69.0 59 0.0013 30.3 9.8 47 130-176 408-454 (544)
295 KOG0055 Multidrug/pheromone ex 68.5 1.6E+02 0.0034 30.8 18.8 36 171-206 790-826 (1228)
296 TIGR00769 AAA ADP/ATP carrier 68.2 1E+02 0.0022 28.6 14.5 66 136-201 275-345 (472)
297 PF01733 Nucleoside_tran: Nucl 67.1 1.8 3.9E-05 37.4 0.0 25 135-160 5-29 (309)
298 PF06645 SPC12: Microsomal sig 66.1 31 0.00066 22.8 5.7 63 97-159 8-70 (76)
299 COG1268 BioY Uncharacterized c 62.9 35 0.00076 27.0 6.4 24 80-103 88-111 (184)
300 PF02632 BioY: BioY family; I 59.3 46 0.00099 25.3 6.3 26 80-105 59-84 (148)
301 PF02694 UPF0060: Uncharacteri 58.1 21 0.00046 25.2 3.9 48 74-121 54-101 (107)
302 PRK02237 hypothetical protein; 57.1 33 0.00071 24.3 4.7 48 74-121 56-103 (109)
303 KOG3097 Predicted membrane pro 51.2 19 0.00041 31.5 3.4 71 72-142 308-382 (390)
304 PF06779 DUF1228: Protein of u 48.9 82 0.0018 21.3 6.0 65 138-202 5-70 (85)
305 COG4769 Predicted membrane pro 47.4 41 0.00088 25.9 4.2 51 83-139 82-132 (181)
306 PF10225 DUF2215: Uncharacteri 47.1 1.6E+02 0.0034 24.7 8.2 53 124-180 31-83 (249)
307 PRK11469 hypothetical protein; 46.6 1.5E+02 0.0032 23.6 9.4 75 35-120 106-181 (188)
308 KOG1237 H+/oligopeptide sympor 46.5 2.7E+02 0.0059 26.6 10.9 57 127-183 458-514 (571)
309 TIGR01666 YCCS hypothetical me 46.0 3.1E+02 0.0066 27.1 14.3 42 102-143 55-97 (704)
310 PF09605 Trep_Strep: Hypotheti 44.6 1.6E+02 0.0034 23.4 7.6 43 80-122 34-76 (186)
311 PF10785 NADH-u_ox-rdase: NADH 44.2 1E+02 0.0022 21.0 5.8 39 88-126 32-77 (86)
312 PF12805 FUSC-like: FUSC-like 43.7 2E+02 0.0044 24.4 12.6 36 108-143 3-39 (284)
313 TIGR02230 ATPase_gene1 F0F1-AT 43.7 1.1E+02 0.0025 21.4 6.7 21 90-110 59-79 (100)
314 TIGR01667 YCCS_YHJK integral m 43.0 3.4E+02 0.0074 26.8 14.6 42 102-143 55-97 (701)
315 PF03219 TLC: TLC ATP/ADP tran 42.4 2.9E+02 0.0063 25.8 15.1 66 137-202 292-362 (491)
316 COG2233 UraA Xanthine/uracil p 41.7 2.9E+02 0.0062 25.5 9.9 99 65-163 40-141 (451)
317 COG1575 MenA 1,4-dihydroxy-2-n 40.9 2.4E+02 0.0052 24.4 13.8 13 135-147 127-139 (303)
318 KOG3312 Predicted membrane pro 40.6 1.4E+02 0.0031 22.5 6.1 28 207-234 28-55 (186)
319 KOG2765 Predicted membrane pro 40.2 70 0.0015 28.4 5.1 13 98-110 208-220 (416)
320 TIGR00986 3a0801s05tom22 mitoc 40.1 88 0.0019 23.5 5.0 26 151-176 57-82 (145)
321 PF04281 Tom22: Mitochondrial 39.4 92 0.002 23.3 5.1 26 151-176 59-84 (137)
322 PF11299 DUF3100: Protein of u 38.1 31 0.00066 28.3 2.6 48 131-179 175-222 (241)
323 COG5336 Uncharacterized protei 36.5 57 0.0012 23.1 3.3 35 113-147 59-93 (116)
324 PRK10720 uracil transporter; P 35.6 3.2E+02 0.0069 25.0 9.0 34 100-133 298-334 (428)
325 PRK10697 DNA-binding transcrip 35.4 31 0.00068 25.0 2.0 10 205-214 59-68 (118)
326 PF07456 Hpre_diP_synt_I: Hept 34.8 2E+02 0.0042 21.9 6.3 52 80-137 67-118 (148)
327 PF01405 PsbT: Photosystem II 33.4 72 0.0016 16.6 2.5 10 205-214 19-28 (29)
328 COG5547 Small integral membran 33.1 1.2E+02 0.0026 18.7 4.5 39 104-142 8-46 (62)
329 TIGR00801 ncs2 uracil-xanthine 32.7 3.8E+02 0.0083 24.3 9.2 97 65-163 29-130 (415)
330 COG2119 Predicted membrane pro 32.2 2.6E+02 0.0056 22.2 8.6 37 82-118 142-178 (190)
331 PRK10692 hypothetical protein; 32.0 1.3E+02 0.0028 20.4 4.3 18 103-120 3-20 (92)
332 COG2076 EmrE Membrane transpor 31.9 1.9E+02 0.0041 20.6 8.5 34 92-125 18-51 (106)
333 KOG4830 Predicted sugar transp 31.8 93 0.002 26.4 4.4 105 56-160 218-326 (412)
334 PF09930 DUF2162: Predicted tr 31.4 3E+02 0.0064 22.7 7.3 52 65-119 122-173 (224)
335 PRK11875 psbT photosystem II r 30.0 86 0.0019 16.5 2.5 10 205-214 19-28 (31)
336 PF00854 PTR2: POT family; In 29.0 1.5E+02 0.0033 26.2 5.9 47 77-123 75-121 (372)
337 PF03547 Mem_trans: Membrane t 29.0 4.1E+02 0.0089 23.5 8.9 16 87-102 8-23 (385)
338 COG3619 Predicted membrane pro 29.0 3.3E+02 0.0072 22.4 15.0 30 74-103 55-84 (226)
339 TIGR00836 amt ammonium transpo 28.2 4.6E+02 0.0099 23.8 10.8 36 148-183 296-331 (403)
340 TIGR00926 2A1704 Peptide:H+ sy 28.0 2.7E+02 0.0059 27.1 7.6 55 132-186 570-624 (654)
341 PF13940 Ldr_toxin: Toxin Ldr, 27.9 1.1E+02 0.0023 16.5 2.7 21 80-100 14-34 (35)
342 PF04346 EutH: Ethanolamine ut 27.5 4.4E+02 0.0095 23.4 13.2 95 90-184 62-162 (354)
343 PRK03818 putative transporter; 27.3 5.5E+02 0.012 24.5 10.6 83 75-158 436-520 (552)
344 CHL00031 psbT photosystem II p 27.2 98 0.0021 16.6 2.5 10 205-214 19-28 (33)
345 KOG3574 Acetyl-CoA transporter 27.0 2.7E+02 0.0059 25.3 6.6 44 133-176 375-418 (510)
346 COG1230 CzcD Co/Zn/Cd efflux s 26.9 4.2E+02 0.009 22.9 11.2 24 168-191 164-187 (296)
347 PRK00159 putative septation in 26.6 2.1E+02 0.0046 19.5 7.9 24 32-55 31-54 (87)
348 PF10762 DUF2583: Protein of u 26.2 1.5E+02 0.0033 19.9 3.8 18 103-120 3-20 (89)
349 KOG2601 Iron transporter [Inor 26.1 5.1E+02 0.011 23.6 11.7 43 72-114 61-103 (503)
350 KOG2927 Membrane component of 25.2 76 0.0016 27.8 3.0 8 173-180 224-231 (372)
351 TIGR02865 spore_II_E stage II 25.0 6.2E+02 0.013 25.3 9.5 25 133-157 189-213 (764)
352 PF04341 DUF485: Protein of un 24.3 2.3E+02 0.0049 19.4 4.7 39 280-318 24-63 (91)
353 PRK07419 1,4-dihydroxy-2-napht 24.2 4.7E+02 0.01 22.6 13.7 8 156-163 140-147 (304)
354 PRK10666 ammonium transporter; 23.9 5.7E+02 0.012 23.5 11.7 33 151-183 323-355 (428)
355 PF04474 DUF554: Protein of un 23.7 2.5E+02 0.0055 23.1 5.6 55 83-138 11-65 (226)
356 TIGR03802 Asp_Ala_antiprt aspa 22.9 6.7E+02 0.015 24.0 9.5 83 75-159 451-534 (562)
357 PF13493 DUF4118: Domain of un 22.8 91 0.002 21.6 2.7 25 80-104 81-105 (105)
358 TIGR03173 pbuX xanthine permea 22.6 3.4E+02 0.0074 24.5 6.9 98 65-163 19-117 (406)
359 TIGR03644 marine_trans_1 proba 22.5 5.9E+02 0.013 23.1 13.2 38 154-191 315-354 (404)
360 PF05232 BTP: Bacterial Transm 22.4 1.6E+02 0.0034 18.9 3.4 40 65-104 25-64 (67)
361 KOG4255 Uncharacterized conser 21.1 5.9E+02 0.013 22.6 8.4 100 59-158 31-143 (439)
362 PF11990 DUF3487: Protein of u 20.6 3.5E+02 0.0075 19.8 6.7 30 69-98 19-48 (121)
363 PRK14229 camphor resistance pr 20.6 3.2E+02 0.007 19.4 8.1 20 138-157 60-79 (108)
364 KOG3500 Vacuolar H+-ATPase V0 20.6 2.8E+02 0.006 18.6 4.4 41 83-123 10-50 (84)
365 KOG4112 Signal peptidase subun 20.5 3E+02 0.0065 19.0 5.6 30 97-126 23-52 (101)
366 TIGR00844 c_cpa1 na(+)/h(+) an 20.3 8.9E+02 0.019 24.4 9.8 15 88-102 23-37 (810)
367 PF03773 DUF318: Predicted per 20.3 5.6E+02 0.012 22.1 12.2 32 162-193 84-115 (307)
368 PF06781 UPF0233: Uncharacteri 20.2 3E+02 0.0065 18.8 8.3 23 32-54 31-53 (87)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.8e-29 Score=224.19 Aligned_cols=280 Identities=35% Similarity=0.563 Sum_probs=229.3
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcccccccchhcc--------ccccC--CChh----hHHHHHHHHHHHHHHHHHhHHHh
Q 020792 32 SATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGI--------TNDLG--LSVA----EYSLFGSILTIGAMIGAIMSGKI 97 (321)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~s~~----~~~~~~~~~~~~~~i~~~~~g~l 97 (321)
++.++.......+.++.+-++|..+..++..+.+ .+++| .+++ ..+.+.+.+.+|.++|+++.|++
T Consensus 4 ~~t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~l 83 (485)
T KOG0569|consen 4 KLTRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLL 83 (485)
T ss_pred CccHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666667777777788999998888865533 34455 3333 25788999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHH
Q 020792 98 ADYIGRRGTMGFSDIVCIIGWVIIVF---SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICI 174 (321)
Q Consensus 98 ~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 174 (321)
+||+|||..+.++.++..++.++..+ .+++.+++++|++.|+..|......+.++.|..|++.||....+.+.+..+
T Consensus 84 a~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~ 163 (485)
T KOG0569|consen 84 ADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVI 163 (485)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHH
Confidence 99999999999998888887776665 578889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc------chhhHHHHHHhHHHHHHHHHHhhcccCChHHHHh-cCChHHHHHHHHHHhCCCcchHHHHHHHH
Q 020792 175 GVSMTYLIGA------FLNWRILALIGTIPCLVQLIGLCFIPESPRWLAK-TGKGIESEAALQRLRGADADISEEAAEIR 247 (321)
Q Consensus 175 g~~~~~~i~~------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (321)
|..++..++. .-.|++.+.+..+++++.++...++||+|+|+.. +++++++++++++.++++++.++..+..+
T Consensus 164 g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~ 243 (485)
T KOG0569|consen 164 GILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLR 243 (485)
T ss_pred HHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHH
Confidence 9998866652 2269999999999999999999999999999976 89999999999999988754444333333
Q ss_pred HHHHH-Hhcccccchhhhhhhh-hhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCchHHH
Q 020792 248 EYTET-LERLSEGGILELFQRK-YAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMI 311 (321)
Q Consensus 248 ~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 311 (321)
+.+++ .+++++.+++++++++ .+++..+.+.+...+++.+.+.+.+|++.++++.|+++..+..
T Consensus 244 e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~ 309 (485)
T KOG0569|consen 244 EIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQY 309 (485)
T ss_pred HHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHH
Confidence 32222 2334677899999985 4677888889999999999999999999999999998874433
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=3.7e-29 Score=235.35 Aligned_cols=267 Identities=21% Similarity=0.280 Sum_probs=211.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHH
Q 020792 34 TSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIV 113 (321)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 113 (321)
.+..|.+++++.++.+..++....++..+|.+.+++|++..+.+++.+++.++.+++.+++|+++||+|||+++++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 35566666777777778888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc--------
Q 020792 114 CIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF-------- 185 (321)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~-------- 185 (321)
.+++.++++++++++.++++|++.|++.|+..+...++++|++|+++|++..++...+..+|.++++.++..
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 999999999999999999999999999999999999999999999999999999999999998888765422
Q ss_pred ---------hhhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcch---HHHH---HHHHHHH
Q 020792 186 ---------LNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADI---SEEA---AEIREYT 250 (321)
Q Consensus 186 ---------~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~ 250 (321)
.+||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.++++.+.+... .++. ++.+...
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~ 401 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIH 401 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhh
Confidence 169999998888877777777889999999999999999999999887654211 1110 0111000
Q ss_pred HH------Hhcccc-----------------cchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhh
Q 020792 251 ET------LERLSE-----------------GGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS 301 (321)
Q Consensus 251 ~~------~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (321)
.. +++... ..++++++.+.++++++ +++.+++...+++++..|.|.++++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~-l~~~wf~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 402 QEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIK-LMGVWFTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred hhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000 13555666666555554 5555666666789999999998755
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=1.1e-27 Score=220.85 Aligned_cols=287 Identities=33% Similarity=0.581 Sum_probs=230.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhc--ccccccchhcccccc-----CCCh--hhHHHHHHHHHHHHHHHHHhHHHhhhhccch
Q 020792 34 TSAVVLSTFVAVCGSYVFGSA--IGYSSPAQSGITNDL-----GLSV--AEYSLFGSILTIGAMIGAIMSGKIADYIGRR 104 (321)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~s~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr 104 (321)
............++.+..+++ .+...+....+.++. ..+. .+.+++.+...++..+++++.|+++|++|||
T Consensus 40 ~~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk 119 (513)
T KOG0254|consen 40 SPFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRK 119 (513)
T ss_pred ceehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344555566666777777775 556666666555532 2222 3458999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhc
Q 020792 105 GTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGA 184 (321)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 184 (321)
+.++++.+...++.+++++++|++++.++|++.|+|.|....+.+.+++|..|++.||...+..+....+|..++..++.
T Consensus 120 ~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~ 199 (513)
T KOG0254|consen 120 KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINY 199 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999977776
Q ss_pred ch-----hhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCC-CcchHHHHHHHH-HHHHHHh-cc
Q 020792 185 FL-----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGA-DADISEEAAEIR-EYTETLE-RL 256 (321)
Q Consensus 185 ~~-----~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~-~~ 256 (321)
.. +||..+.+..+.+++..+..+++||+|+|+.++++.+++++.+++++.. +.+.+.+.++.+ +...+.. ..
T Consensus 200 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (513)
T KOG0254|consen 200 GTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAE 279 (513)
T ss_pred hhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccc
Confidence 66 6999999988888888877788999999999999999999999999883 334444444443 1111111 12
Q ss_pred cccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCC--chHHHHHHHHHHhc
Q 020792 257 SEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSG--SIGMIAMVVIQVID 320 (321)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~i~g 320 (321)
.+..+.+++++..+++..+.+.+..+++..+.+.+.+|.+.+++..|.+. .....+.++.++++
T Consensus 280 ~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~ 345 (513)
T KOG0254|consen 280 GKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLG 345 (513)
T ss_pred ccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHH
Confidence 22246677776677888889999999999999999999999999998864 46666666665554
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=1.4e-27 Score=220.05 Aligned_cols=272 Identities=19% Similarity=0.245 Sum_probs=199.5
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcccccccchhccccc-----cCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHH
Q 020792 32 SATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITND-----LGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGT 106 (321)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~ 106 (321)
+..+..+..+.++.++.+.++++....+...|.+.++ .+.+..+.+++.+...++..++.+++|+++||+|||++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~ 88 (502)
T TIGR00887 9 PFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRV 88 (502)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 3445566667777788889999998888887766553 24556678999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHH
Q 020792 107 MGFSDIVCIIGWVIIVFSKA------AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTY 180 (321)
Q Consensus 107 l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 180 (321)
+.+++++..++.++++++++ ++.+++.|++.|++.|..++..+.+++|++|+++|+++.++.+....+|..+++
T Consensus 89 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 89 YGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888765 678999999999999999999999999999999999999999999999888777
Q ss_pred Hhhcc---------------------------hhhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChH-HHHHHHHHH
Q 020792 181 LIGAF---------------------------LNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGI-ESEAALQRL 232 (321)
Q Consensus 181 ~i~~~---------------------------~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~ 232 (321)
.++.. .+||+++.+.++++++..+..+++||+|+|+..+++++ ++.+.+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~ 248 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAV 248 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHH
Confidence 66431 16999998888888877777788999999998877764 455556555
Q ss_pred hCCCcc-hHHHHHHHHHHHHHHhcccccchhhhhhhhh---hhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCc
Q 020792 233 RGADAD-ISEEAAEIREYTETLERLSEGGILELFQRKY---AHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS 307 (321)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 307 (321)
...+.+ ..++.++.++ + ++..+.+++++++++. .++..+.+....+.....++....|.|.++++.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~ 323 (502)
T TIGR00887 249 LQVKIEAEPDEVEKAST---A-VEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPP 323 (502)
T ss_pred hccccccCcccccchhc---c-ccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCC
Confidence 432211 1111111000 0 0111234677776422 22233333333333333456677889999988888654
No 5
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=1.9e-26 Score=210.88 Aligned_cols=282 Identities=32% Similarity=0.546 Sum_probs=205.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccccccchhccccccCCC--------hhhHHHHHHHHHHHHHHHHHhHHHhhhhccchH
Q 020792 34 TSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLS--------VAEYSLFGSILTIGAMIGAIMSGKIADYIGRRG 105 (321)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~ 105 (321)
.++.+...+++.+..+...++.....+..+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~ 102 (481)
T TIGR00879 23 YWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKK 102 (481)
T ss_pred cHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHH
Confidence 355555566666777777888888888888888777776 789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHh
Q 020792 106 TMGFSDIVCIIGWVIIVFS---KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLI 182 (321)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 182 (321)
+++++.++.+++.+++.+. .+++.+++.|++.|++.+..++....++.|++|+++|+++.++.+.+..+|..+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~ 182 (481)
T TIGR00879 103 SLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGF 182 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999998888654 3455899999999999999999999999999999999999999999999999999998
Q ss_pred h---cc----hhhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHH---HHHHHHHH
Q 020792 183 G---AF----LNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAA---EIREYTET 252 (321)
Q Consensus 183 ~---~~----~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 252 (321)
+ .. .+||+.|++.++..++..+..+++||+|++...+++.+++.+..++....+.+..+..+ ..+...+.
T Consensus 183 ~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (481)
T TIGR00879 183 GSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSI 262 (481)
T ss_pred HHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 8 33 38999999977766666666677899988776666655555544444332222111111 11111111
Q ss_pred Hhcccccchhhhhhhh--hhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCchHHHHHHH
Q 020792 253 LERLSEGGILELFQRK--YAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVV 315 (321)
Q Consensus 253 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 315 (321)
+.+.....+.+.++.. ..++.++..++..+......+.+.+|.|.++++.|++...+.....+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 327 (481)
T TIGR00879 263 EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSII 327 (481)
T ss_pred HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHH
Confidence 1111112233333321 23555566666666666666778899999998889988654444433
No 6
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=4.2e-26 Score=209.34 Aligned_cols=268 Identities=27% Similarity=0.443 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccchhcccccc--------CCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH
Q 020792 36 AVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDL--------GLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTM 107 (321)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l 107 (321)
..........++.+..+++...+++..|.+++++ +.+..+.+++.+.+.++..++++++|+++||+|||+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~ 88 (479)
T PRK10077 9 YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL 88 (479)
T ss_pred HHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3444556666778899999999998888787766 88899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh------------hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHH
Q 020792 108 GFSDIVCIIGWVIIVFS------------KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIG 175 (321)
Q Consensus 108 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 175 (321)
+++.++.+++.+..++. ..++.+++.|++.|++.|..++...++++|++|+++|++++++.+.+..+|
T Consensus 89 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G 168 (479)
T PRK10077 89 KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFG 168 (479)
T ss_pred HHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHH
Confidence 99999998888877753 224677899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc------------chhhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHH
Q 020792 176 VSMTYLIGA------------FLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEA 243 (321)
Q Consensus 176 ~~~~~~i~~------------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (321)
..+++.++. ..+||+.|++.+++.++..+..+++||+|+++..+++.+++++..++....++ ..+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 247 (479)
T PRK10077 169 QLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL-ATQAL 247 (479)
T ss_pred HHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh-HHHHH
Confidence 888776543 23899999998887777766667789999988777777766665555543321 11111
Q ss_pred HHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCchH
Q 020792 244 AEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIG 309 (321)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 309 (321)
++.++...++ ... .+..+. .........+....+.+..+.+...+|.|.++++.|.+....
T Consensus 248 ~~~~~~~~~~-~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~ 308 (479)
T PRK10077 248 QEIKHSLDHG-RKT---GGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIA 308 (479)
T ss_pred HHHHHHHHHh-hhh---hhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchH
Confidence 1111111100 000 011111 111122223334455555667778889999998888876533
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=5.8e-26 Score=204.17 Aligned_cols=175 Identities=17% Similarity=0.183 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHH
Q 020792 40 STFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWV 119 (321)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 119 (321)
...++++.++..+++....+...|.+++++|++.++.+++.+++.+++.+++++.|+++||+|||+++..+.++..++..
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~ 88 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIAST 88 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 33444445555566666667777789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc----------hhhH
Q 020792 120 IIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF----------LNWR 189 (321)
Q Consensus 120 ~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~----------~~w~ 189 (321)
+++++++++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|..+++.+++. .+||
T Consensus 89 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr 168 (412)
T TIGR02332 89 ATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQ 168 (412)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchh
Confidence 999999999999999999999999999999999999999999999999999999999988887653 3899
Q ss_pred HHHHHhHHHHHHHHHHh-hcccCChH
Q 020792 190 ILALIGTIPCLVQLIGL-CFIPESPR 214 (321)
Q Consensus 190 ~~~~~~~~~~~~~~~~~-~~~~e~~~ 214 (321)
+.|++.+++.++..++. +++||+|+
T Consensus 169 ~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 169 WLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 99999888776654444 56788874
No 8
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1e-26 Score=198.72 Aligned_cols=267 Identities=19% Similarity=0.191 Sum_probs=203.5
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHH
Q 020792 32 SATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSD 111 (321)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 111 (321)
..++.++.++..+++++..++...-..+...|.+.++.++|.+|.|.+.+.+.+.+.++.++.|.++||.+.|+.+.+++
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 34455566667777777777777777788888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh--cch---
Q 020792 112 IVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG--AFL--- 186 (321)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~--~~~--- 186 (321)
++.++..++++++++.+.+.++.++.|+.+|...|.+...+..|+|+++||+..++.+...++|+.+.|++. +++
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999998888777 544
Q ss_pred -hhHHHHHHhHHHHHHHHHHh-hcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhh-
Q 020792 187 -NWRILALIGTIPCLVQLIGL-CFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILE- 263 (321)
Q Consensus 187 -~w~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 263 (321)
+||..|++.++++++..+.. +..+++|+.. +- + +.++-.++..+..++++..+..+.++
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~---GL-----P----------~ie~~~~d~~e~~~~~~~~~~ls~~~i 243 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQSE---GL-----P----------PIEEYRGDPLEIYEEEKENEGLTAWQI 243 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCcccc---CC-----C----------CHHHhhcCchhhhhhhccCCCccHHHH
Confidence 89999999998877766555 4567776421 10 0 11111111111101111112133333
Q ss_pred ----hhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhc-CCCCchHHHHHHHHHHhc
Q 020792 264 ----LFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA-GFSGSIGMIAMVVIQVID 320 (321)
Q Consensus 264 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~i~g 320 (321)
+++++..|-+ ++........-+++..|.|.|+.|. |+|...+....+++.+.|
T Consensus 244 ~~~YVL~Nk~iW~l----a~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~ag 301 (448)
T COG2271 244 FVKYVLKNKLIWLL----ALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAG 301 (448)
T ss_pred HHHHHHcChHHHHH----HHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 3444444433 3333333334688999999999988 999998888888776654
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=8.4e-26 Score=195.24 Aligned_cols=172 Identities=19% Similarity=0.267 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHH
Q 020792 39 LSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGW 118 (321)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 118 (321)
..++...++.|..+.........+|.+++|+|+|..+.|+..++|.++..++.|+...+.||+.||++++..+.+++++.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n 92 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSN 92 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Confidence 34455566666777777777889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHH
Q 020792 119 VIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALI 194 (321)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~ 194 (321)
+++++++|++.++++|++.|+..|..++...++..++.|+++|++++++...+..++.+++.+++.++ |||+.|+.
T Consensus 93 ~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ 172 (394)
T COG2814 93 LLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLA 172 (394)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888776666554 99999999
Q ss_pred hHHHHHHHHHHh-hccc
Q 020792 195 GTIPCLVQLIGL-CFIP 210 (321)
Q Consensus 195 ~~~~~~~~~~~~-~~~~ 210 (321)
.+.++++.++.. ..+|
T Consensus 173 ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 173 IAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 999988877765 4567
No 10
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=8.8e-26 Score=208.52 Aligned_cols=256 Identities=22% Similarity=0.326 Sum_probs=193.7
Q ss_pred cchhccccccCCC---hhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 60 PAQSGITNDLGLS---VAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 60 ~~~~~~~~~~~~s---~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
+..|.+.+++|++ ..+.++..+++.++..++++++|+++||+|||++++++.++.+++.++.+++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4567799999999 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-hhHHHHHHhHHHHHHHHHHhhcccCChHH
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-NWRILALIGTIPCLVQLIGLCFIPESPRW 215 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-~w~~~~~~~~~~~~~~~~~~~~~~e~~~~ 215 (321)
.|++.+...+....++.|++|+++|+.+.++...+..+|.++++.++..+ +||+.+++.+++.++..+..+++||+|+|
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~ 269 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRW 269 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 99999999999999999999999999999999999999999999888766 79999999988888777777788999999
Q ss_pred HHhcCChHHHHHHHHHHhCCCcch-HHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHc
Q 020792 216 LAKTGKGIESEAALQRLRGADADI-SEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFY 294 (321)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (321)
+..+++.+++.+.+++..+.+... .++..+.+...+..+++++.+++++++++..+...+.+++.++.....++.+.
T Consensus 270 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 347 (505)
T TIGR00898 270 LISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLV-- 347 (505)
T ss_pred HHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 999998888877776654332211 11111111111111122235678888887776666655555443322222222
Q ss_pred HHHHHhhcCCCCchHHHHHHHHHHh
Q 020792 295 ASSIFISAGFSGSIGMIAMVVIQVI 319 (321)
Q Consensus 295 ~~~~~~~~g~s~~~~~~~~~~~~i~ 319 (321)
.+....+.+......+.++..++
T Consensus 348 --~~~~~~~~~~~~~~~~~~~~~i~ 370 (505)
T TIGR00898 348 --LDLGNLGGNIYLDLFISGLVELP 370 (505)
T ss_pred --ccccccCCChHHHHHHHHHHHHH
Confidence 22333355554444455544443
No 11
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.94 E-value=7.3e-25 Score=196.50 Aligned_cols=180 Identities=23% Similarity=0.263 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHH
Q 020792 36 AVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCI 115 (321)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 115 (321)
..+......++..+..+++.....+..|.+++++|++..+.+++.+.+.++..+++++.|+++||+|||++++++.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34444555666677777777777888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----h--hH
Q 020792 116 IGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----N--WR 189 (321)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~--w~ 189 (321)
++.++++++++++.+++.|++.|++.+..++...+++.|++|+++|+++.++.+.+..+|..+++.++..+ + ||
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~ 168 (405)
T TIGR00891 89 AGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWR 168 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888877654 4 99
Q ss_pred HHHHHhHHHHHHHHHHhhcccCChHH
Q 020792 190 ILALIGTIPCLVQLIGLCFIPESPRW 215 (321)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~e~~~~ 215 (321)
+.|++.++..++..+....+||++++
T Consensus 169 ~~f~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
T TIGR00891 169 ALFFISILPIIFALWLRKNIPEAEDW 194 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 99988766666655555667887654
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=8.3e-25 Score=200.99 Aligned_cols=247 Identities=17% Similarity=0.154 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHhhcccccccchhccccccCCChhh----HHH--HHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHH
Q 020792 40 STFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAE----YSL--FGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIV 113 (321)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~~~--~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 113 (321)
......++.+..+++...++...|.+.++++.+.++ .+. ..++..++..++++++|+++||+|||+++.++.++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l 96 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 345556778888888888888888898888644322 222 24778899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHH--------HHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh--
Q 020792 114 CIIGWVIIVFSKAAWW--------LDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG-- 183 (321)
Q Consensus 114 ~~~~~~~~~~~~~~~~--------~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~-- 183 (321)
++++++++++++++.. ++++|+++|++.|..++....+++|++|+++||++.++...+..+|..+++.+.
T Consensus 97 ~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~ 176 (490)
T PRK10642 97 MSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL 176 (490)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 789999999999999999999999999999999999999888777777666433
Q ss_pred --c--------chhhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHH
Q 020792 184 --A--------FLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETL 253 (321)
Q Consensus 184 --~--------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
. ..+||+.|++.+++.++.+++...+||+|++...+++.++.. + +..
T Consensus 177 ~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~--------------------~---~~~ 233 (490)
T PRK10642 177 ISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD--------------------R---EGL 233 (490)
T ss_pred HHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc--------------------c---ccc
Confidence 2 248999999977666665555567899987643221110000 0 000
Q ss_pred hcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhc-CCCCchHHH
Q 020792 254 ERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA-GFSGSIGMI 311 (321)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~ 311 (321)
++.++.++++++++ .++........ .+.....++.+..|.|.++++. |++...+..
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 290 (490)
T PRK10642 234 QDGPKVSFKEIATK-HWRSLLTCIGL-VIATNVTYYMLLTYMPSYLSHNLHYSEDHGVL 290 (490)
T ss_pred cccccCCHHHHHHH-hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 00122345566654 22333322222 2223334667788999999655 887764443
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.94 E-value=1e-25 Score=205.89 Aligned_cols=182 Identities=18% Similarity=0.084 Sum_probs=151.4
Q ss_pred chHHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHH
Q 020792 33 ATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDI 112 (321)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 112 (321)
+.+..+..+.+..++++..+.+....+...|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|||+++.++.+
T Consensus 23 ~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 23 WFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 44445555666666777777777777888899999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHH-----hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-
Q 020792 113 VCIIGWVIIVF-----SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL- 186 (321)
Q Consensus 113 ~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~- 186 (321)
+++++.++.+. +++++.+++.|++.|++.+...+....+++|++|+++||+++++...+..+|..+++.+..+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 88777766554 589999999999999999999999999999999999999999999999999988888776432
Q ss_pred ------hhHHHHHHhHHHHHHHHHHh-hcccCChH
Q 020792 187 ------NWRILALIGTIPCLVQLIGL-CFIPESPR 214 (321)
Q Consensus 187 ------~w~~~~~~~~~~~~~~~~~~-~~~~e~~~ 214 (321)
+||..|.+.+++.++..+.. ++.+++|+
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 48888888777766555444 34566553
No 14
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.94 E-value=3.2e-25 Score=195.84 Aligned_cols=213 Identities=15% Similarity=0.086 Sum_probs=159.8
Q ss_pred cccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 020792 58 SSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLV 137 (321)
Q Consensus 58 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 137 (321)
+.+.+|.+++++|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.+....+.......++++.+++.|++.
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 89 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLA 89 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999999987665555544433333337899999999999
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccCC
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPES 212 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e~ 212 (321)
|++.+. .......++|++|+++|++++++.+.+..+|..+++.++..+ +||+.|++.++++++..+.. +++||+
T Consensus 90 G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 90 ALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred HhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999986 555666679999999999999999999999999888887766 99999999888776655544 567887
Q ss_pred hHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHH
Q 020792 213 PRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIA 292 (321)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (321)
|++. ++. . +. + + . ..+++++++++..+...+. .++....++.+.
T Consensus 169 p~~~---~~~------------~--~~-~---~---~--------~~~~~~ll~~~~~~~~~~~----~~~~~~~~~~~~ 212 (368)
T TIGR00903 169 PFQA---AEG------------F--GF-K---D---A--------VKEFGALAGRKDLWIIGAI----LGFGVALFDNLA 212 (368)
T ss_pred CCCC---CCC------------c--ch-H---H---H--------HHHHHHHHcChhHHHHHHH----HHHHHHHHHHHH
Confidence 6431 000 0 00 0 0 0 0124567776665444333 333334467888
Q ss_pred HcHHHHHhhcCCCCc
Q 020792 293 FYASSIFISAGFSGS 307 (321)
Q Consensus 293 ~~~~~~~~~~g~s~~ 307 (321)
.|+|.++++.|++..
T Consensus 213 ~wlp~~L~~~g~s~~ 227 (368)
T TIGR00903 213 IWLEAALRPAGLEDI 227 (368)
T ss_pred HHHHHHHHHCCCChH
Confidence 999999988888754
No 15
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=5e-25 Score=199.52 Aligned_cols=171 Identities=21% Similarity=0.248 Sum_probs=147.4
Q ss_pred HHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 020792 44 AVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF 123 (321)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 123 (321)
..+..+...++...+....|.+.+++|+|..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 107 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF 107 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 34444444444445567788899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHH
Q 020792 124 SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPC 199 (321)
Q Consensus 124 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~ 199 (321)
+++++.+++.|++.|++.|..++....++.|++|+++|++++++.+.+..+|..++|.+.+.+ +||+.|++.+++.
T Consensus 108 ~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~ 187 (434)
T PRK11663 108 SSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIA 187 (434)
T ss_pred HhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 999999999999999999998999999999999999999999999999999999988877655 8999999888776
Q ss_pred HHHHH-HhhcccCChH
Q 020792 200 LVQLI-GLCFIPESPR 214 (321)
Q Consensus 200 ~~~~~-~~~~~~e~~~ 214 (321)
++..+ ..+++||+|+
T Consensus 188 ~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 188 IVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHcCCCHh
Confidence 55443 3355677764
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.94 E-value=2.4e-24 Score=195.04 Aligned_cols=239 Identities=17% Similarity=0.163 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHhhcccccccchhccccccC---CChhhHHHH---HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHH
Q 020792 39 LSTFVAVCGSYVFGSAIGYSSPAQSGITNDLG---LSVAEYSLF---GSILTIGAMIGAIMSGKIADYIGRRGTMGFSDI 112 (321)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~---~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 112 (321)
..+....++.+.+.++...++...|.+.++++ .+..+.+.. .++..++..++++++|+++||+|||+++.++.+
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 101 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 34445566677777888777888888988874 555544443 444555555999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhH--------HHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhc
Q 020792 113 VCIIGWVIIVFSKAAW--------WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGA 184 (321)
Q Consensus 113 ~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 184 (321)
+++++++++++++++. .++++|+++|++.|..++...++++|++|+++|+++.++.+.+...|..+++.+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~ 181 (432)
T PRK10406 102 MMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVV 181 (432)
T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988763 58899999999999999999999999999999999999988888777776665421
Q ss_pred ------------chhhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Q 020792 185 ------------FLNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTET 252 (321)
Q Consensus 185 ------------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
..+||++|++.+++.++.......+||+|++.. ++
T Consensus 182 ~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~--------------------------~~------- 228 (432)
T PRK10406 182 VLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQET--------------------------RA------- 228 (432)
T ss_pred HHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH--------------------------hh-------
Confidence 348999999888777666544445666643100 00
Q ss_pred HhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhc-CCCCchHHHHHHH
Q 020792 253 LERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA-GFSGSIGMIAMVV 315 (321)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~ 315 (321)
.++..+++++++++..+...+. ..+.....++.+..|.|.++++. |++..+.....++
T Consensus 229 --~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i 287 (432)
T PRK10406 229 --LKEAGSLKGLWRNRRAFIMVLG---FTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTA 287 (432)
T ss_pred --hcccccHHHHHhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 0011235566665433322221 22221223566778899988764 8887655444433
No 17
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=2e-24 Score=193.11 Aligned_cols=156 Identities=13% Similarity=0.139 Sum_probs=139.8
Q ss_pred ccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 57 YSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 57 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
...+.+|.+.+++|.+..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.++++++++++++++.++++|++
T Consensus 27 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 27 VPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred HHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 34556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccC
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPE 211 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e 211 (321)
+|++.+..++...+++.|++|+++|+++.++...+..+|..++|.+++.+ +||+.|++.+++.++..+.. .++||
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 186 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPL 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999888899999999999999999999999999999999988887654 99999999888776665544 34555
Q ss_pred C
Q 020792 212 S 212 (321)
Q Consensus 212 ~ 212 (321)
+
T Consensus 187 ~ 187 (390)
T PRK03545 187 L 187 (390)
T ss_pred C
Confidence 4
No 18
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=2.3e-24 Score=194.96 Aligned_cols=252 Identities=21% Similarity=0.226 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHH
Q 020792 41 TFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVI 120 (321)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 120 (321)
+..+.+..+..+++.....+..|.+++++|+++.+.+++.+.+.++..+++++.|+++||+|||+++.++.+..+++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 99 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL 99 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 34455556666666666677888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc----hhhHHHHHHhH
Q 020792 121 IVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF----LNWRILALIGT 196 (321)
Q Consensus 121 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~----~~w~~~~~~~~ 196 (321)
.+++++++.++++|++.|++.+..++....++.|++|+++|+++.++...+..+|.++++.+... .+||+.|++..
T Consensus 100 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~ 179 (426)
T PRK12307 100 SGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGL 179 (426)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888877654 38999998755
Q ss_pred HHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHH
Q 020792 197 IPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVG 276 (321)
Q Consensus 197 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (321)
...++.+......||++++..++.+ .++++.++ ..+.....+++.++++..+.....
T Consensus 180 ~~~~~~~~~~~~~p~~~~~~~~~~~------------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 236 (426)
T PRK12307 180 LPVLLVIYIRARAPESKEWEEAKLS------------GKGKHSQS-----------AWSVFSLSMKGLFNRAQFPLTLCV 236 (426)
T ss_pred HHHHHHHHHHHHCCCChHHHHhhhh------------cccccccc-----------chhhhhHHHHHHHhhchHHHHHHH
Confidence 4433333222234555432111000 00000000 000011234566666555443333
Q ss_pred HHHHHHHHhhChhhHHHcHHHHHhhcCCCCchHHHHHHHH
Q 020792 277 VGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVI 316 (321)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 316 (321)
.... +......+.+..+.|.++++.|.++.......++.
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 275 (426)
T PRK12307 237 FIVL-FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAA 275 (426)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 2222 22233334567788999888888877555544443
No 19
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=4.3e-24 Score=191.96 Aligned_cols=181 Identities=23% Similarity=0.275 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHH
Q 020792 35 SAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVC 114 (321)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 114 (321)
++.+..+++..+..+.++++....+...|.+.+++|.++++.+++.+...++..++.++.|+++||+|||+++..+.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 35666667777777777888777788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHH
Q 020792 115 IIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRI 190 (321)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~ 190 (321)
.++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++..+ +||+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK11551 91 GLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRH 170 (406)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 999888999999999999999999999999999999999999999999999999999999999998887544 8999
Q ss_pred HHHHhHHHHHHHHHHh-hcccCChHH
Q 020792 191 LALIGTIPCLVQLIGL-CFIPESPRW 215 (321)
Q Consensus 191 ~~~~~~~~~~~~~~~~-~~~~e~~~~ 215 (321)
.|++.+++.++..+.. .++||+|++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 9988776655554433 457887643
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=9.5e-25 Score=195.15 Aligned_cols=268 Identities=21% Similarity=0.282 Sum_probs=181.2
Q ss_pred HHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh
Q 020792 45 VCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS 124 (321)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 124 (321)
.+..+..++......+..|.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+++..+.++.+++.++..+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 102 (398)
T TIGR00895 23 FLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA 102 (398)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 33344444444455667788999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHH
Q 020792 125 KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCL 200 (321)
Q Consensus 125 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~ 200 (321)
++++.+++.|++.|++.+..++...+++.|++|+++|+++.++...+..+|..+++.+++.+ +|++.+++.++..+
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 182 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPL 182 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999888887655 89999888765544
Q ss_pred HHHH-HhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHH
Q 020792 201 VQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGL 279 (321)
Q Consensus 201 ~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (321)
+..+ ..+++||++++..++ ++++..+..++........+++ +.++ .+++++..+...+.+++++..+... .+.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 257 (398)
T TIGR00895 183 LLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS--ALPE-QKATQGTKRSVFKALFQGKTARITV-LLWL 257 (398)
T ss_pred HHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc--cccc-cccccchhhHHHHHHhcchhHHHHH-HHHH
Confidence 4443 445678887654433 2222222222211110000000 0000 0000000111122233322222222 2222
Q ss_pred HHHHHhhChhhHHHcHHHHHhhcCCCCchHHHHHHHHH
Q 020792 280 MVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQ 317 (321)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 317 (321)
..+......+....|.|.+.++.|.++...+...++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 295 (398)
T TIGR00895 258 LYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFN 295 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 33333344567778888777777998876655544433
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=2.9e-24 Score=197.62 Aligned_cols=176 Identities=19% Similarity=0.162 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHH
Q 020792 38 VLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIG 117 (321)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 117 (321)
+..+..+++..++...+.++++..+|.+.+++|.+.++.+|+.+.+.++..++.+++|+++||+|||++++++.++.+++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44566777777888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccC-CCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHH
Q 020792 118 WVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEIT-PKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILA 192 (321)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~ 192 (321)
++++++++|++.++++|+++|++.+...+.....+.+.+ |+++|+++.++......+|..++|.+++.+ +||+.|
T Consensus 85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f 164 (495)
T PRK14995 85 SLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVF 164 (495)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHH
Confidence 999999999999999999999999988888888787766 678899999999999999999999888776 899999
Q ss_pred HHhHHHHHHHHHHh-hcccCCh
Q 020792 193 LIGTIPCLVQLIGL-CFIPESP 213 (321)
Q Consensus 193 ~~~~~~~~~~~~~~-~~~~e~~ 213 (321)
++...+.++.+++. +++|+++
T Consensus 165 ~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 165 LINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC
Confidence 98877766655544 4567654
No 22
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.93 E-value=7.8e-24 Score=193.65 Aligned_cols=154 Identities=15% Similarity=0.213 Sum_probs=128.5
Q ss_pred ccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 57 YSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 57 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
...+..|.+.+++|++.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.++++|++
T Consensus 54 ~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l 133 (476)
T PLN00028 54 AAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFF 133 (476)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHH----HHhhc---------chhhHHHHHHhHHHHHHHH
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMT----YLIGA---------FLNWRILALIGTIPCLVQL 203 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~----~~i~~---------~~~w~~~~~~~~~~~~~~~ 203 (321)
.|++.+.. .....+++|++|+++|++++++.+....+|..++ |.+.. ..+||+.|++.+++.++..
T Consensus 134 ~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 134 IGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMG 212 (476)
T ss_pred HHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Confidence 99988764 4456688999999999999999876665555544 33322 1379999999888877766
Q ss_pred HHhhcccC
Q 020792 204 IGLCFIPE 211 (321)
Q Consensus 204 ~~~~~~~e 211 (321)
+..+++++
T Consensus 213 l~~~~~~~ 220 (476)
T PLN00028 213 ILVLTLGQ 220 (476)
T ss_pred HHHHHHcC
Confidence 65555543
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=1.9e-23 Score=186.73 Aligned_cols=154 Identities=15% Similarity=0.219 Sum_probs=137.4
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVG 138 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 138 (321)
.+.+|.+.+++|+++++.++..++..++..+++++.|+++||+|||++++.+.++.+++.++++++++++.+++.|++.|
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 119 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLG 119 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 45677799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhh-cccCC
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLC-FIPES 212 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~-~~~e~ 212 (321)
++.+...+....++.|++|+++|+++.+....+.++|..++|.+++.+ +||+.|++.+++.++..+..+ ..||+
T Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 120 LALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999999999999999988888888665 899999988776665544332 35654
No 24
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=6.5e-24 Score=194.10 Aligned_cols=226 Identities=13% Similarity=0.071 Sum_probs=166.1
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHhhhhhhhc
Q 020792 68 DLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS--KAAWWLDLGRLLVGYGMGLLS 145 (321)
Q Consensus 68 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~ 145 (321)
+++++..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+++.++ .+++.+++.|+++|++.+..+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 789999999999999999999999999999999999999999999988888776543 567889999999999999999
Q ss_pred chhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHhhc-ccCChHHHHhc
Q 020792 146 YVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCF-IPESPRWLAKT 219 (321)
Q Consensus 146 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~ 219 (321)
+....+++|++|+++|++++++...+..+|..+++.+.+.+ +||+.|++.+++.++..+.+++ .+|+|+.. +
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~ 227 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH--P 227 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC--C
Confidence 99999999999999999999999999999999888877544 8999999988887776665544 45555310 0
Q ss_pred CChHHHHHHHHHHhCCCcchHHHHHHHHHHHHH--HhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHH
Q 020792 220 GKGIESEAALQRLRGADADISEEAAEIREYTET--LERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASS 297 (321)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (321)
...++++ +..++..++ ++.+.+..+++.++++..+.. .+..++.....+.+..|+|.
T Consensus 228 ~~~~~~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lp~ 286 (465)
T TIGR00894 228 CISKFEK-----------------KYINSSLQGQKGSTRQSLPIKAIPKSLPVWAI----WFAIFGHFWLYTILPTYLPT 286 (465)
T ss_pred CCCHHHH-----------------HHHHhhcccccCCCCCCCCHHHHhcCHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 0000000 000000000 011122346666665544433 33334444456778889999
Q ss_pred HHhhc-CCCCchHHHHHHHH
Q 020792 298 IFISA-GFSGSIGMIAMVVI 316 (321)
Q Consensus 298 ~~~~~-g~s~~~~~~~~~~~ 316 (321)
|+++. |++...++...++.
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~ 306 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLP 306 (465)
T ss_pred HHHHHhCcChHHhHHHHHHH
Confidence 99876 99887666655443
No 25
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.92 E-value=2.1e-23 Score=187.64 Aligned_cols=232 Identities=16% Similarity=0.198 Sum_probs=178.0
Q ss_pred HHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh
Q 020792 45 VCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS 124 (321)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 124 (321)
.+..+........+.+.+|.+.+++|.+.++.++..+++.+++.++++++|+++||+|||++++.+.++.+++.+++.++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 44455555666777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHH
Q 020792 125 KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCL 200 (321)
Q Consensus 125 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~ 200 (321)
++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+ +||+.|++.+++.+
T Consensus 102 ~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~ 181 (413)
T PRK15403 102 TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGL 181 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999998876777788899999999999999999999999988888888654 89999999888877
Q ss_pred HHHHHh-hcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHH
Q 020792 201 VQLIGL-CFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGL 279 (321)
Q Consensus 201 ~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (321)
+..+.. +++||+++. +++ +.+..+ ...+++++++++..+...+...+
T Consensus 182 i~~~~~~~~lp~~~~~---~~~--------------~~~~~~---------------~~~~~~~ll~~~~~~~~~l~~~~ 229 (413)
T PRK15403 182 IAFVGLLLAMPETVKR---GAV--------------PFSAKS---------------VLRDFRNVFRNRLFLTGAATLSL 229 (413)
T ss_pred HHHHHHHHhCCCCccc---cCC--------------CCChHH---------------HHHHHHHHHcCHHHHHHHHHHHH
Confidence 766543 457876420 000 000000 01124556666655543333322
Q ss_pred HHHHHhhChhhHHHcHHHHHhhc-CCCCchHHHH
Q 020792 280 MVLQQFGGVNGIAFYASSIFISA-GFSGSIGMIA 312 (321)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~ 312 (321)
. ....+.+..+.|.++++. |+++...++.
T Consensus 230 ~----~~~~~~~~~~~P~~l~~~~g~s~~~~gl~ 259 (413)
T PRK15403 230 S----YIPMMSWVAVSPVILIDAGGMTTSQFAWT 259 (413)
T ss_pred H----HHHHHHHHHhChHHHHHhcCCCHHHHHHH
Confidence 2 223456667789888887 8888755543
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=2.7e-23 Score=185.82 Aligned_cols=148 Identities=16% Similarity=0.192 Sum_probs=130.0
Q ss_pred cccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 020792 56 GYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRL 135 (321)
Q Consensus 56 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (321)
...++.+|.+++++|+|.++.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.++++|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 45578889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHH
Q 020792 136 LVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLI 204 (321)
Q Consensus 136 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~ 204 (321)
++|++.+..++....++.+++| ++|+++++.+..+..+|..+++.++..+ +||+.+.+.++..++..+
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997 7799999999887777766666655443 799887766555444433
No 27
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=2.4e-23 Score=192.91 Aligned_cols=244 Identities=22% Similarity=0.248 Sum_probs=182.7
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Q 020792 67 NDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSY 146 (321)
Q Consensus 67 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 146 (321)
+.++.+.....+..+++.+|..+|++++|+++||+|||+++++++++..++.+..++++|++.+++.|++.|++.++.+.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 55677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch--hhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChHH
Q 020792 147 VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIE 224 (321)
Q Consensus 147 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 224 (321)
....++.|++++++|+.+..+ ......++.+++.+++++ +||+.+++..++.++.++..++.||+|+|+..+++.++
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~ 269 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDE 269 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHH
Confidence 999999999999999999999 666666666666666665 89999999999988887776666799999999999999
Q ss_pred HHHHHHHHhCCC---cchHHHHHHH--HHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHH
Q 020792 225 SEAALQRLRGAD---ADISEEAAEI--REYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF 299 (321)
Q Consensus 225 ~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (321)
+.+.+++..+.+ .+..+..... .+.......+++..+.++++.+..+...+...+.++. +...+|.-.+.
T Consensus 270 a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-----~~~~y~gl~~~ 344 (521)
T KOG0255|consen 270 AIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFV-----FSLVYYGLSLN 344 (521)
T ss_pred HHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHH-----HhHHHHhhhhh
Confidence 998888875433 1222221111 1111111222335678888877544444444444442 33444433333
Q ss_pred h-hcCCCCchHHHHHHHH
Q 020792 300 I-SAGFSGSIGMIAMVVI 316 (321)
Q Consensus 300 ~-~~g~s~~~~~~~~~~~ 316 (321)
. ..|.+......+.+..
T Consensus 345 ~~~lg~~~~~~~~~~~~~ 362 (521)
T KOG0255|consen 345 VSGLGGNIYLNFTLSGLV 362 (521)
T ss_pred hhhcCchHHHHHHHHHHH
Confidence 2 2355555444444443
No 28
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.91 E-value=1.2e-28 Score=224.50 Aligned_cols=242 Identities=37% Similarity=0.666 Sum_probs=192.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHhhhhhhhcchhhh
Q 020792 74 AEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK---AAWWLDLGRLLVGYGMGLLSYVVPV 150 (321)
Q Consensus 74 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~~~~~~~~~~ 150 (321)
.+.++..+...+|..+|++++|+++||+|||+.++++.++..++.++.++++ +++.+.++|++.|++.|...+..+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3578999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----h---hHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCChH
Q 020792 151 YIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----N---WRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGI 223 (321)
Q Consensus 151 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~---w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 223 (321)
++.|..|+++|+...++.+.+..+|..++..++... + ||..+++.+++.++.++..+++||+|+|+..+++.+
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~ 205 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDE 205 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccccc
Confidence 999999999999999999999999988877666433 4 999999988888877777788999999999999999
Q ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhh-hhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhc
Q 020792 224 ESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKY-AHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA 302 (321)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (321)
++++.+++.++.+.+.++.. ++.++.++. ++++..++++++++. +++..+.+.+..+.+..+.+...+|.+.+++..
T Consensus 206 ~A~~~l~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~ 283 (451)
T PF00083_consen 206 EAEKVLRKLRGKEIEDEEIE-EIKAEKKES-QESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENA 283 (451)
T ss_pred cccccccccccccccccccc-ccccccccc-cccceeeeecccccccccccccccccccccccccccccccccccccccc
Confidence 99998888655432222221 111111111 111256777777644 566666677777777777788889999999888
Q ss_pred CCCCc-hHHHHHHHHH
Q 020792 303 GFSGS-IGMIAMVVIQ 317 (321)
Q Consensus 303 g~s~~-~~~~~~~~~~ 317 (321)
|.+.. ......++..
T Consensus 284 ~~~~~~~~~~~~~~~~ 299 (451)
T PF00083_consen 284 GISNSFLATLILGLVN 299 (451)
T ss_pred cccccccccccccccc
Confidence 88766 4444443333
No 29
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=1.1e-23 Score=187.76 Aligned_cols=158 Identities=21% Similarity=0.247 Sum_probs=141.3
Q ss_pred cccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 020792 56 GYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRL 135 (321)
Q Consensus 56 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (321)
.......|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++..+++++++++.++++|+
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRV 90 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 33455667799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhh-ccc
Q 020792 136 LVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLC-FIP 210 (321)
Q Consensus 136 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~-~~~ 210 (321)
+.|++.+...+....++.|++|+++|+++.++.+....+|..+++.+++.+ +||+.|++.+++.++..+..+ +.|
T Consensus 91 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 91 LLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheec
Confidence 999999999999999999999999999999999999999999998888764 899999988887776655543 456
Q ss_pred CCh
Q 020792 211 ESP 213 (321)
Q Consensus 211 e~~ 213 (321)
|+|
T Consensus 171 ~~~ 173 (399)
T TIGR00893 171 DPP 173 (399)
T ss_pred CCC
Confidence 554
No 30
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.3e-23 Score=186.12 Aligned_cols=230 Identities=17% Similarity=0.188 Sum_probs=182.9
Q ss_pred ccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHhhhhhh
Q 020792 66 TNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 66 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~ 143 (321)
..+++++..+.+++.+.++.|+++++++.|+++||+|-|+++..+.++.++++++...+. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 456889999999999999999999999999999999999999999999999999888764 556789999999999999
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHhhc-ccCChHHHH
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCF-IPESPRWLA 217 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~ 217 (321)
.+++...+.+.|.|+++|++..++...+..+|.+++.++++.+ ||+++|++.++++++..+++++ ..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~-- 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK-- 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc--
Confidence 9999999999999999999999999999999988877777655 8999999999999888877754 4555531
Q ss_pred hcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcc--cccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcH
Q 020792 218 KTGKGIESEAALQRLRGADADISEEAAEIREYTETLERL--SEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYA 295 (321)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (321)
++.-.++|.+.+++...+++.+ .+.+++++++++..|.+++. .++...+++.+..|+
T Consensus 223 -----------------h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~----~f~~~~~~~~l~~y~ 281 (466)
T KOG2532|consen 223 -----------------HPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWIS----AFGGNWGFYLLLTYL 281 (466)
T ss_pred -----------------CCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHH----HHHHHHHHHHHHHHh
Confidence 1111222233333332222222 46789999998766555444 444444688999999
Q ss_pred HHHHhhc-CCCCchHHHHHHHHHH
Q 020792 296 SSIFISA-GFSGSIGMIAMVVIQV 318 (321)
Q Consensus 296 ~~~~~~~-g~s~~~~~~~~~~~~i 318 (321)
|.|++++ |++....++..++..+
T Consensus 282 PtY~~~VL~f~v~~~G~~salP~l 305 (466)
T KOG2532|consen 282 PTYLKEVLGFDVRETGFLSALPFL 305 (466)
T ss_pred hHHHHHHhCCChhhhhHHHHHHHH
Confidence 9999998 9998877776666544
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=6.8e-23 Score=186.59 Aligned_cols=168 Identities=14% Similarity=0.149 Sum_probs=135.3
Q ss_pred HHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-
Q 020792 46 CGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS- 124 (321)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~- 124 (321)
+.......+.......+|++.++ |++..+.++..+...+++.+++++.|+++||+|||++++++.++.+++.+++++.
T Consensus 36 ~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~ 114 (452)
T PRK11273 36 FGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVP 114 (452)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhh
Confidence 33343333333345566778888 9999999999999999999999999999999999999999999999998888775
Q ss_pred ---hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHH-HHHHhhc----chhhHHHHHHhH
Q 020792 125 ---KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVS-MTYLIGA----FLNWRILALIGT 196 (321)
Q Consensus 125 ---~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~----~~~w~~~~~~~~ 196 (321)
.+++.+++.|++.|++.+..++.....+.|++|+++|++++++.+.+..+|.. .+|.+.. ..+||+.|++.+
T Consensus 115 ~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~ 194 (452)
T PRK11273 115 WATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPA 194 (452)
T ss_pred cccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHH
Confidence 36778899999999999988888888899999999999999999999988864 4554332 128999999888
Q ss_pred HHHHHHHH-HhhcccCChH
Q 020792 197 IPCLVQLI-GLCFIPESPR 214 (321)
Q Consensus 197 ~~~~~~~~-~~~~~~e~~~ 214 (321)
++.++..+ ..+++||+|+
T Consensus 195 ~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 195 FAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred HHHHHHHHHHHHHccCCHh
Confidence 77666544 4456788764
No 32
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.91 E-value=6e-24 Score=188.65 Aligned_cols=164 Identities=17% Similarity=0.197 Sum_probs=141.8
Q ss_pred HHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHH
Q 020792 50 VFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWW 129 (321)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 129 (321)
....+........|.+.+++|++..+.+++.++..++..++.++.|+++||+|||++++++.++.+++.++.+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (379)
T TIGR00881 6 AYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWV 85 (379)
T ss_pred HHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHH
Confidence 33444455566778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHH-Hhhcc----hhhHHHHHHhHHHHHHHHH
Q 020792 130 LDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTY-LIGAF----LNWRILALIGTIPCLVQLI 204 (321)
Q Consensus 130 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~i~~~----~~w~~~~~~~~~~~~~~~~ 204 (321)
+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..++| .++.. .+||+.|++.+++.++..+
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (379)
T TIGR00881 86 MAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSL 165 (379)
T ss_pred HHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988888 34433 3899999888877665544
Q ss_pred Hh-hcccCCh
Q 020792 205 GL-CFIPESP 213 (321)
Q Consensus 205 ~~-~~~~e~~ 213 (321)
.. ++.||+|
T Consensus 166 ~~~~~~~~~~ 175 (379)
T TIGR00881 166 ICFLLLRDSP 175 (379)
T ss_pred HHheeeCCCc
Confidence 44 4566664
No 33
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=3.1e-22 Score=181.41 Aligned_cols=175 Identities=17% Similarity=0.159 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHhhcccccccchh-cccccc--CCChhhHHHHH-----HHHHHHHHHHHHhHHHhhhhccchHHHHHHH
Q 020792 40 STFVAVCGSYVFGSAIGYSSPAQS-GITNDL--GLSVAEYSLFG-----SILTIGAMIGAIMSGKIADYIGRRGTMGFSD 111 (321)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~s~~~~~~~~-----~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 111 (321)
......++.+.+.++...+....| .+.+++ +.++. .+++. ++..++..+++++.|+++||+|||++++++.
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~ 101 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTV 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHH
Confidence 445555677777777777666655 344444 66665 34443 3455677899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhH--------HHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 112 IVCIIGWVIIVFSKAAW--------WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 112 ~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
++++++++++++++++. .++++|+++|++.|..++....++.|++|+++|++..+....+..+|..+++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~ 181 (438)
T PRK09952 102 WMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLV 181 (438)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876 5888999999999999999999999999999999999999999999988776543
Q ss_pred c------------chhhHHHHHHhHHHHHHHHHHhhcccCChHH
Q 020792 184 A------------FLNWRILALIGTIPCLVQLIGLCFIPESPRW 215 (321)
Q Consensus 184 ~------------~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~ 215 (321)
. ..+||++|++.+++.++........||+|++
T Consensus 182 ~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~ 225 (438)
T PRK09952 182 SLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEF 225 (438)
T ss_pred HHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 2 2489999998877765544444456777644
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=2e-23 Score=191.84 Aligned_cols=172 Identities=18% Similarity=0.275 Sum_probs=151.4
Q ss_pred HHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 020792 42 FVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII 121 (321)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 121 (321)
..+.++.+...++.....+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34445556666666677788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHH
Q 020792 122 VFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTI 197 (321)
Q Consensus 122 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~ 197 (321)
+++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|..++|.+++++ +||+.|++.+.
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~ 164 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVP 164 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999998888765 89999998887
Q ss_pred HHHHHHHHh-hcccCCh
Q 020792 198 PCLVQLIGL-CFIPESP 213 (321)
Q Consensus 198 ~~~~~~~~~-~~~~e~~ 213 (321)
+.++..+.. +++||++
T Consensus 165 ~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 165 IGIIVVVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHHHHHHcCCcc
Confidence 766655544 4456643
No 35
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=6.5e-25 Score=189.42 Aligned_cols=173 Identities=18% Similarity=0.254 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHH
Q 020792 40 STFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWV 119 (321)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 119 (321)
.+...++...+.+.+...+....+.+++.+|++++..|++.+++.+++.+++|+.|+++||+.||+++.+|..++.++.+
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~ 113 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF 113 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH
Confidence 34444555566666666667778889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHH
Q 020792 120 IIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALI 194 (321)
Q Consensus 120 ~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~ 194 (321)
..+++..+|++.++|.+.|+|.+...++.+.+++|.+|..+|+++.++++.+..+|..+|.+.+..+ .|||.|+.
T Consensus 114 ~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~ 193 (493)
T KOG1330|consen 114 ASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRG 193 (493)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999998888777665 49999999
Q ss_pred hHHHHHHHHHHhh-cccCC
Q 020792 195 GTIPCLVQLIGLC-FIPES 212 (321)
Q Consensus 195 ~~~~~~~~~~~~~-~~~e~ 212 (321)
.++++++..++.+ +.+|+
T Consensus 194 ~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 194 SAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred ehHHHHHHHHHHHhhccCc
Confidence 9999888777764 45555
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.90 E-value=6.9e-23 Score=180.21 Aligned_cols=159 Identities=28% Similarity=0.483 Sum_probs=138.0
Q ss_pred cccccccchh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 020792 54 AIGYSSPAQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDL 132 (321)
Q Consensus 54 ~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (321)
......+..| .+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..++++.+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (352)
T PF07690_consen 11 GFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLI 90 (352)
T ss_dssp HHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhh
Confidence 3333456667 789999999999999999999999999999999999999999999999999999666667688889999
Q ss_pred HHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-h
Q 020792 133 GRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-C 207 (321)
Q Consensus 133 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~ 207 (321)
.|++.|++.+...+....++.|++|+++|+++.+..+.+..+|..++|.+++.+ +||+.|++.+++.++..++. +
T Consensus 91 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~ 170 (352)
T PF07690_consen 91 ARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFIL 170 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHC
T ss_pred hccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhh
Confidence 999999999999999999999999999999999999999999999999888766 79999999998888776643 4
Q ss_pred cccCC
Q 020792 208 FIPES 212 (321)
Q Consensus 208 ~~~e~ 212 (321)
+++++
T Consensus 171 ~~~~~ 175 (352)
T PF07690_consen 171 FLPEP 175 (352)
T ss_dssp CC---
T ss_pred hhhhc
Confidence 44444
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=2.7e-22 Score=178.79 Aligned_cols=159 Identities=16% Similarity=0.275 Sum_probs=141.6
Q ss_pred cccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 020792 54 AIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLG 133 (321)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (321)
......+..|.+.+++|.++++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.++.++++.+.+.
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVL 99 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 34445677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hc
Q 020792 134 RLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CF 208 (321)
Q Consensus 134 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~ 208 (321)
|++.|++.+...+...+++.|++|+++|+++.+..+....+|..+++.+++.+ +||+.+++.+++.++..+.. ++
T Consensus 100 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 100 RFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999988888887665 89999998877766655544 44
Q ss_pred ccCC
Q 020792 209 IPES 212 (321)
Q Consensus 209 ~~e~ 212 (321)
.||+
T Consensus 180 ~~~~ 183 (385)
T TIGR00710 180 LPET 183 (385)
T ss_pred CCCC
Confidence 5665
No 38
>PRK15075 citrate-proton symporter; Provisional
Probab=99.90 E-value=4.6e-22 Score=180.26 Aligned_cols=159 Identities=24% Similarity=0.296 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHH-HHHH-----HHHHHHHHHhHHHhhhhccchHHHHHHHHH
Q 020792 40 STFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLF-GSIL-----TIGAMIGAIMSGKIADYIGRRGTMGFSDIV 113 (321)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~-----~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 113 (321)
.....+++.+.+.++...++...|.+.++++.++.+.+.. .+.. .++..+++++.|+++||+|||++++.+.++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 3555666788888888888899999999999888775433 3322 233357889999999999999999999999
Q ss_pred HHHHHHHHHHhhhhH--------HHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhc-
Q 020792 114 CIIGWVIIVFSKAAW--------WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGA- 184 (321)
Q Consensus 114 ~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~- 184 (321)
.+++.++++++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.++.
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998876 46889999999999999989999999999999999999988776666655554443
Q ss_pred -----------chhhHHHHHHhHHH
Q 020792 185 -----------FLNWRILALIGTIP 198 (321)
Q Consensus 185 -----------~~~w~~~~~~~~~~ 198 (321)
..+||++|++....
T Consensus 176 l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 176 LNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHH
Confidence 24899999875443
No 39
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=3.2e-22 Score=178.36 Aligned_cols=164 Identities=18% Similarity=0.293 Sum_probs=142.4
Q ss_pred HHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhH
Q 020792 49 YVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAW 128 (321)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 128 (321)
+..+.......+.+|.+++++|.+..+.+++.+...+++.++++++|+++||+|||+++.++.++.+++.++++++++++
T Consensus 13 ~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~ 92 (382)
T PRK10091 13 FGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYL 92 (382)
T ss_pred HHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 33333444446678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHH
Q 020792 129 WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI 204 (321)
Q Consensus 129 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~ 204 (321)
.+++.|++.|++.+...+....++.|++|+++|+++.+....+..+|..++|.+++.+ +||+.|++.++..++..+
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 172 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLA 172 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888889999999999999999999999999988888777554 899999998877665554
Q ss_pred Hh-hcccCC
Q 020792 205 GL-CFIPES 212 (321)
Q Consensus 205 ~~-~~~~e~ 212 (321)
.. +++||.
T Consensus 173 ~~~~~lp~~ 181 (382)
T PRK10091 173 SIYFWVPDI 181 (382)
T ss_pred HHHHhCCCC
Confidence 43 456765
No 40
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=1.7e-21 Score=179.69 Aligned_cols=177 Identities=24% Similarity=0.338 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHH
Q 020792 39 LSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGW 118 (321)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 118 (321)
..+..+++..+...++.....+..|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 99 (496)
T PRK03893 20 KAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGT 99 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34445555666666666667778888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHH
Q 020792 119 VIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALI 194 (321)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~ 194 (321)
++.+++++++.+++.|++.|++.+..++....++.|++|+++|+++.+....+..+|..++|.+.+.+ +||+.|++
T Consensus 100 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~ 179 (496)
T PRK03893 100 LACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFI 179 (496)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988877655 89999887
Q ss_pred hHHHHHHHHHHhhcccCChHH
Q 020792 195 GTIPCLVQLIGLCFIPESPRW 215 (321)
Q Consensus 195 ~~~~~~~~~~~~~~~~e~~~~ 215 (321)
..+..++.++....+||++++
T Consensus 180 ~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 180 GILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHhCCCchhh
Confidence 554444443333456776543
No 41
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=4e-22 Score=178.47 Aligned_cols=163 Identities=13% Similarity=0.168 Sum_probs=141.0
Q ss_pred HHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh
Q 020792 45 VCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS 124 (321)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 124 (321)
.+..+..+......++.+|.+.+++|+|.++.+++.+...+++.+++++.|++.||+|||+++..+.++.+++..+.+++
T Consensus 13 ~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~ 92 (394)
T PRK03699 13 FLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS 92 (394)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 44455555555666778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc-----hhhHHHHHHhHHHH
Q 020792 125 KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF-----LNWRILALIGTIPC 199 (321)
Q Consensus 125 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~-----~~w~~~~~~~~~~~ 199 (321)
++++.+++.|++.|++.+...+....++.|++|+++|+.+.+..+.+..+|..++|.+.+. .+||+.|.+.+++.
T Consensus 93 ~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~ 172 (394)
T PRK03699 93 HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVY 172 (394)
T ss_pred chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 9999999999999999998899999999999999999999998888888888887766543 38999999888776
Q ss_pred HHHHHHhh
Q 020792 200 LVQLIGLC 207 (321)
Q Consensus 200 ~~~~~~~~ 207 (321)
++..+..+
T Consensus 173 ~~~~~~~~ 180 (394)
T PRK03699 173 VAIFILTL 180 (394)
T ss_pred HHHHHHHH
Confidence 66554443
No 42
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=9.5e-23 Score=183.63 Aligned_cols=257 Identities=18% Similarity=0.118 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHhhc-ccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHH
Q 020792 38 VLSTFVAVCGSYVFGSA-IGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCII 116 (321)
Q Consensus 38 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 116 (321)
+.++.+++...+....+ .++..+.+..+.+|.+....+.+.+.+++.++++++.+++|.|.||++-.+.+....+++.+
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 33334444444443333 23333444457789999999999999999999999999999999999988888888888888
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----------
Q 020792 117 GWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---------- 186 (321)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---------- 186 (321)
..++....+|++.+++.|+++|+.++..+|....+++.||.+++|+..+++++....+|++++++++..+
T Consensus 124 ~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 124 FGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 8888888999999999999999999999999999999999999999999999999888888888887651
Q ss_pred hhHHHHHHhHHHHHHHHHHh-hcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhh
Q 020792 187 NWRILALIGTIPCLVQLIGL-CFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELF 265 (321)
Q Consensus 187 ~w~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
||||.|++.+++.++..+.. +++|+.|.... -..++|..-..++.+..+ ....+++.+...+++.+
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~-fl~~~ek~~~~~~~~~~~------------~~~~~~~~~~~~~~~a~ 270 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPDNPSKAW-FLTDEEKELVVERLRESP------------SGGIENKFKWKGFKEAL 270 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecCChhhcc-ccchHHHHHHHHHHHhcc------------CCCcccccCHHHHHHHH
Confidence 89999999999888776655 56898875210 000111000000100000 00000112334566677
Q ss_pred hhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhc-CCCCchHHH
Q 020792 266 QRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA-GFSGSIGMI 311 (321)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~ 311 (321)
+++..|+..+.. ++.....+++.+|+|.++++. |+|..++..
T Consensus 271 ~dp~vw~~~l~~----~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ 313 (495)
T KOG2533|consen 271 KDPGVWPFSLCY----FFLKLVNYGFSYWLPLYLKSNGGYSELQANL 313 (495)
T ss_pred hchhHHHHHHHH----HHHhhccccHHHHHHHHHHcCCCcChHHhcc
Confidence 777666644443 333445678999999999984 676654433
No 43
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.90 E-value=7.3e-23 Score=192.05 Aligned_cols=259 Identities=16% Similarity=0.175 Sum_probs=180.3
Q ss_pred HHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh-
Q 020792 47 GSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK- 125 (321)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~- 125 (321)
..+......++....++.++++|+++..+.|++.+.+.++++++.++.+++.||+|||+++.++.++++++++++++.+
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf 120 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHF 120 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHH
Confidence 3343444456677788899999999999999999999999999999999999999999999999999999999887753
Q ss_pred --------------------------------------------------hhHHHHHHHHHHhhhhhhhcchhhhhhhcc
Q 020792 126 --------------------------------------------------AAWWLDLGRLLVGYGMGLLSYVVPVYIAEI 155 (321)
Q Consensus 126 --------------------------------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 155 (321)
.+..++++|+++|++.+..++...+++.|+
T Consensus 121 ~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~ 200 (633)
T TIGR00805 121 LSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDF 200 (633)
T ss_pred hcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhcc
Confidence 245677899999999999999999999999
Q ss_pred CCCccchhHHhHHHHHHHHHHHHHHHhhcch--------------------------hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 156 TPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--------------------------NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 156 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--------------------------~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
+|+++|+.+.++.+.+..+|..+++++++.+ +|+..|++.+++.++..+..+++
T Consensus 201 ~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 201 AKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred CCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998887543 26777888887777766666666
Q ss_pred cCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChh
Q 020792 210 PESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVN 289 (321)
Q Consensus 210 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (321)
|++.+....+.+.+..++ ......+ ++. .....+..+.....++++++++..+.. .+..+.....++
T Consensus 281 p~~lp~~~~~~~~~~~~~--~~~~~~~---~~~----~~~~~~~~~~~~~~~~~Ll~n~~f~~~----~l~~~~~~~~~~ 347 (633)
T TIGR00805 281 PKALPKEGKRVNVDVHET--EKLEKSE---DKS----RKKNSDITKDFPKIIKRLLCNPIYMLV----ILAQVIDSLAFN 347 (633)
T ss_pred ccccCCcccccchhhhhh--hcccccc---ccc----chhhhhhHHHHHHHHHHHHcCcHHHHH----HHHHHHHHHHHH
Confidence 665211000000000000 0000000 000 000000000111234556666544333 333333444567
Q ss_pred hHHHcHHHHHhhc-CCCCchHHHHHHHHHH
Q 020792 290 GIAFYASSIFISA-GFSGSIGMIAMVVIQV 318 (321)
Q Consensus 290 ~~~~~~~~~~~~~-g~s~~~~~~~~~~~~i 318 (321)
.+..|+|.|+++. |+++..++.+.++..+
T Consensus 348 ~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i 377 (633)
T TIGR00805 348 GYITFLPKYLENQYGISSAEANFLIGVVNL 377 (633)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHhhhhhh
Confidence 8888999999876 9999888776665443
No 44
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.89 E-value=1.4e-22 Score=179.78 Aligned_cols=154 Identities=16% Similarity=0.128 Sum_probs=134.3
Q ss_pred cccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 020792 58 SSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLV 137 (321)
Q Consensus 58 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 137 (321)
..+..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++++++.++++|++.
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLA 101 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhh-cccCC
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLC-FIPES 212 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~-~~~e~ 212 (321)
|++.+..++.....+.|++| ++|+++.+....+..+|..+++.+...+ +||+.|++.+++.++..+..+ +++++
T Consensus 102 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (377)
T TIGR00890 102 SAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYP 180 (377)
T ss_pred hHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecC
Confidence 99999888888888999987 5699999999999999887655444333 799999998888777665543 44444
No 45
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.89 E-value=8.7e-22 Score=177.01 Aligned_cols=179 Identities=20% Similarity=0.202 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHH
Q 020792 35 SAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVC 114 (321)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 114 (321)
++.+.......+..+...+....+.+.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||+++.++.+..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45555666666667666666666777888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHH
Q 020792 115 IIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRI 190 (321)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~ 190 (321)
+++.++..++++++.+++.|++.|++.+...+....++.|.+|+++|++..+.......+|..++|.+++.+ +||+
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~ 168 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRG 168 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccH
Confidence 999999999999999999999999999888888899999999999999888888887778888888776554 8999
Q ss_pred HHHHhHHHHHHHHHHh-hcccCCh
Q 020792 191 LALIGTIPCLVQLIGL-CFIPESP 213 (321)
Q Consensus 191 ~~~~~~~~~~~~~~~~-~~~~e~~ 213 (321)
.+++.+++.++..+.. +..||++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9998887777665544 3456653
No 46
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.89 E-value=5.9e-22 Score=179.75 Aligned_cols=175 Identities=13% Similarity=0.109 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHH
Q 020792 39 LSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGW 118 (321)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 118 (321)
..+....+................|.+++ +|+++++.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~ 105 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVM 105 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHH
Confidence 33333344444444444444555666776 59999999999999999999999999999999999999999999988888
Q ss_pred HHHHHh----hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc-----hhhH
Q 020792 119 VIIVFS----KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF-----LNWR 189 (321)
Q Consensus 119 ~~~~~~----~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~-----~~w~ 189 (321)
++.+.. ++++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+.+..+|..+++.+... .+||
T Consensus 106 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~ 185 (438)
T TIGR00712 106 LLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWH 185 (438)
T ss_pred HHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhH
Confidence 877654 4667788899999999998888889999999999999999999999999998887765433 3899
Q ss_pred HHHHHhHHHHHHHHHH-hhcccCChH
Q 020792 190 ILALIGTIPCLVQLIG-LCFIPESPR 214 (321)
Q Consensus 190 ~~~~~~~~~~~~~~~~-~~~~~e~~~ 214 (321)
+.|++.+++.++..+. .+++||+|+
T Consensus 186 ~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 186 AALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 9999988877665544 455677754
No 47
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.89 E-value=5.5e-22 Score=175.67 Aligned_cols=155 Identities=21% Similarity=0.199 Sum_probs=125.0
Q ss_pred cccchh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHH
Q 020792 58 SSPAQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK-AAWWLDLGRL 135 (321)
Q Consensus 58 ~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 135 (321)
..+..| ++++++|++..+.+++.++..+++.+++++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|+
T Consensus 20 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 99 (366)
T TIGR00886 20 FSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRL 99 (366)
T ss_pred hHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 467777 48999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHh----hcc----------hhhHHHHH-HhHHHHH
Q 020792 136 LVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLI----GAF----------LNWRILAL-IGTIPCL 200 (321)
Q Consensus 136 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i----~~~----------~~w~~~~~-~~~~~~~ 200 (321)
+.|++.+ .++....+++|++|+++|+++.++......+|..+++.+ ... .+||+.++ ..+++.+
T Consensus 100 ~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 100 FIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 9999855 456678899999999999999999886555555544443 332 26999884 4344443
Q ss_pred HHHH-HhhcccCCh
Q 020792 201 VQLI-GLCFIPESP 213 (321)
Q Consensus 201 ~~~~-~~~~~~e~~ 213 (321)
+..+ ...+.+|+|
T Consensus 179 ~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 179 LPALLIFFVGADTP 192 (366)
T ss_pred HHHHHHHHhcccCC
Confidence 3333 334456654
No 48
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=2.3e-21 Score=174.02 Aligned_cols=158 Identities=17% Similarity=0.215 Sum_probs=137.0
Q ss_pred ccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 020792 55 IGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGR 134 (321)
Q Consensus 55 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (321)
...+.|..|.+++++|.++++.++..+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|
T Consensus 22 ~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 101 (401)
T PRK11043 22 TDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLR 101 (401)
T ss_pred HHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 34446777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhccc
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIP 210 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~~ 210 (321)
++.|++.+...+...+++.|++|+++|++..+.......+|..++|.+++.+ +||+.|++.+++.++..+..++++
T Consensus 102 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 102 FVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999998887887888999999999888888888877788887887777654 899999988877777666555555
Q ss_pred CC
Q 020792 211 ES 212 (321)
Q Consensus 211 e~ 212 (321)
|+
T Consensus 182 ~~ 183 (401)
T PRK11043 182 PS 183 (401)
T ss_pred CC
Confidence 54
No 49
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.89 E-value=6.8e-22 Score=174.67 Aligned_cols=152 Identities=11% Similarity=0.091 Sum_probs=134.2
Q ss_pred cccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh-----hhHHHHH
Q 020792 58 SSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK-----AAWWLDL 132 (321)
Q Consensus 58 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~ 132 (321)
..+.+|.+..+++.+..+.+++.++..++..++++++|+++||+|||++++.+.++.+++..+..+.+ +++.+++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (365)
T TIGR00900 18 TQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYV 97 (365)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 34556667788899999999999999999999999999999999999999999999888888888777 9999999
Q ss_pred HHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhc
Q 020792 133 GRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 133 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
.|++.|++.+...+...+++.|++|+++|+++.+..+.+..+|..++|.+++.+ +||+.|++.++..++..+..++
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999888665 8999998877766655544443
Q ss_pred c
Q 020792 209 I 209 (321)
Q Consensus 209 ~ 209 (321)
+
T Consensus 178 ~ 178 (365)
T TIGR00900 178 V 178 (365)
T ss_pred c
Confidence 3
No 50
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=1.8e-21 Score=163.16 Aligned_cols=238 Identities=21% Similarity=0.280 Sum_probs=182.7
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYG 140 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 140 (321)
..|...+..|.+..+.+++......|..+++..+|.++|++|||+.+.+..+..++..++.+.++|+..+.+.|.+.|+|
T Consensus 100 i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g 179 (528)
T KOG0253|consen 100 ILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFG 179 (528)
T ss_pred HHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhcc
Confidence 34447788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh----cchhhHHHHHHhHHHHHHHHHHhhcccCChHHH
Q 020792 141 MGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG----AFLNWRILALIGTIPCLVQLIGLCFIPESPRWL 216 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~----~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 216 (321)
.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...+. ..+||||.......+..+.....+++||+|++.
T Consensus 180 ~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 180 VGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFY 257 (528)
T ss_pred CCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchh
Confidence 999 888889999999999997776666 77888877766555 444999999888877777777888899999999
Q ss_pred HhcCChHHHHHHHHHHhCCCcc----------hHHHHHHH----HHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHH
Q 020792 217 AKTGKGIESEAALQRLRGADAD----------ISEEAAEI----REYTETLERLSEGGILELFQRKYAHSLIVGVGLMVL 282 (321)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (321)
..+++++++.+.++++.+.|.. ...+++++ .+.+.+..+....+..+++....++..+.....++.
T Consensus 258 ~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfg 337 (528)
T KOG0253|consen 258 LAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFG 337 (528)
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHh
Confidence 9999999998888877554421 11111111 111222233445677888876666665555444444
Q ss_pred HHhhChhhHHHcHHHHHhh
Q 020792 283 QQFGGVNGIAFYASSIFIS 301 (321)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~ 301 (321)
+.+ .++......+.+++.
T Consensus 338 naf-syyg~VLlttelfqs 355 (528)
T KOG0253|consen 338 NAF-SYYGSVLLTTELFQS 355 (528)
T ss_pred hHH-HHHHHHHHHHHHHhc
Confidence 333 355555555555543
No 51
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.88 E-value=1.9e-21 Score=176.96 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=131.8
Q ss_pred cccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HH
Q 020792 56 GYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDL-GR 134 (321)
Q Consensus 56 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 134 (321)
..++...|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.++++++++++++++.+++ .|
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 115 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAG 115 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 33466778899999999999999999999999999999999999999999999999999999999999999988765 46
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
++.|++.+...+....++.++++ ++|+++.++.+.+..+|..++|.+++.+ +||+.|++.+++.++..+..+++
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 89999988776777788899996 6799999999999999988888777654 89999999888777665554443
No 52
>PRK10133 L-fucose transporter; Provisional
Probab=99.88 E-value=5e-21 Score=173.22 Aligned_cols=136 Identities=13% Similarity=0.166 Sum_probs=118.9
Q ss_pred HHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH---HHh
Q 020792 48 SYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII---VFS 124 (321)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~ 124 (321)
.+..+.......+..|.+++++|+++.+.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++ ..+
T Consensus 35 ~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a 114 (438)
T PRK10133 35 FFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI 114 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444444555777888999999999999999999999999999999999999999999999999999998775 467
Q ss_pred hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 125 KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 125 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
++++.++++|++.|++.|...+..+.++.|+.|+++|...++..+..+.+|..+++.++
T Consensus 115 ~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 115 MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999987777666678888888888888887664
No 53
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.88 E-value=2.9e-21 Score=169.96 Aligned_cols=158 Identities=13% Similarity=0.251 Sum_probs=140.1
Q ss_pred cccchhccccccCCChhh-HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 58 SSPAQSGITNDLGLSVAE-YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 58 ~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
.+...|++.+++|++.++ .|.+.+++..+++++.+++|+++||+|.|+++.++.+.+++...+++++++++.+.+.|++
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~l 124 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVF 124 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566799999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHH---HHhHHHHHHHHHHhhccc
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILA---LIGTIPCLVQLIGLCFIP 210 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~---~~~~~~~~~~~~~~~~~~ 210 (321)
.|++.|+.+ ....++..|+|+++|+++.++...+..+|.++++++++.+ +||+.+ ++......++++..+++|
T Consensus 125 lGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 125 YSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999 9999999999999999999999999999999999888766 788654 344455556666778888
Q ss_pred CChHHH
Q 020792 211 ESPRWL 216 (321)
Q Consensus 211 e~~~~~ 216 (321)
..++-+
T Consensus 204 ~~~~sl 209 (511)
T TIGR00806 204 RPKRSL 209 (511)
T ss_pred CCchhh
Confidence 665533
No 54
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.88 E-value=2.6e-21 Score=172.11 Aligned_cols=156 Identities=22% Similarity=0.342 Sum_probs=140.1
Q ss_pred ccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 57 YSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 57 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
.+.|.+|.+.+++|+++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++..++.+.++++.+.+.|++
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 88 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFL 88 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 34577888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccC
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPE 211 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e 211 (321)
.|++.+...+...+++.|++|+++|+++.++.+.+..+|..++|.+++.+ +||+.|++.+++.++..+.. +++||
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999998999999999999999999999999999999999988887655 89999998887776655444 45676
Q ss_pred C
Q 020792 212 S 212 (321)
Q Consensus 212 ~ 212 (321)
+
T Consensus 169 ~ 169 (377)
T PRK11102 169 T 169 (377)
T ss_pred c
Confidence 5
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.88 E-value=8.5e-21 Score=169.92 Aligned_cols=157 Identities=17% Similarity=0.239 Sum_probs=137.1
Q ss_pred ccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 57 YSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 57 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
...+.+|.+.+++|+++.+.+++.+.+.++..++++++|+++||+|||+++.++.++.+++.+++.+.++++.+++.|++
T Consensus 26 ~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 105 (394)
T PRK11652 26 IYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAI 105 (394)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHH-hhcccC
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPE 211 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~-~~~~~e 211 (321)
.|++.+...+....+..|.+++++|+.+.+..+.+..+|..++|.+++.+ +||+.|++.++..++..+. .++.||
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99998888888888899999998899999999999998888888877654 8999999887766554443 355677
Q ss_pred Ch
Q 020792 212 SP 213 (321)
Q Consensus 212 ~~ 213 (321)
++
T Consensus 186 ~~ 187 (394)
T PRK11652 186 TR 187 (394)
T ss_pred cC
Confidence 53
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=9.1e-21 Score=169.59 Aligned_cols=154 Identities=20% Similarity=0.257 Sum_probs=137.5
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVG 138 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 138 (321)
.+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||++++.+.++.+++..++..+++.+.+++.|++.|
T Consensus 23 ~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 102 (392)
T PRK10473 23 LVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQG 102 (392)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 46688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccCC
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPES 212 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e~ 212 (321)
++.+..++....++.|++|+++|+++.+..+....+|..++|.++..+ +|++.+++.+++.++..+.. +++||+
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999988999999999999999999999999999888888888887654 89999998887766655544 456665
No 57
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.87 E-value=1.8e-20 Score=167.00 Aligned_cols=142 Identities=15% Similarity=0.224 Sum_probs=129.2
Q ss_pred HHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh
Q 020792 45 VCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS 124 (321)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 124 (321)
.++.+..........+.+|.+.+++|.|..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++..+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~ 91 (381)
T PRK03633 12 LCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM 91 (381)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555666677888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 125 KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 125 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
++++.++++|++.|++.+...+.....+.+..++++|+++++..+.+..+|..++|.+++.+
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 92 VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999988888888888999999999999999999999999999998776
No 58
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.87 E-value=1.7e-20 Score=167.77 Aligned_cols=200 Identities=17% Similarity=0.121 Sum_probs=149.7
Q ss_pred cccchhcccc-ccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-----hhhHHHH
Q 020792 58 SSPAQSGITN-DLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-----KAAWWLD 131 (321)
Q Consensus 58 ~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~ 131 (321)
.++..+.+.+ ++|+|.+|.+++.++..+++.++.++.|++.||+|.|+++.++.++.++.++..+++ ++++.++
T Consensus 53 ~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~ll 132 (462)
T PRK15034 53 FSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFI 132 (462)
T ss_pred HHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHH
Confidence 3555666655 899999999999999999999999999999999999999999999999999998886 8999999
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHH----HHHHhhc------------------chhhH
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVS----MTYLIGA------------------FLNWR 189 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~----~~~~i~~------------------~~~w~ 189 (321)
+.|++.|++ +..++.....+++++|+++||++.++.....++|.. +.|.+.. ..+||
T Consensus 133 i~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~ 211 (462)
T PRK15034 133 VIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLA 211 (462)
T ss_pred HHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHH
Confidence 999999998 778999999999999999999999999655555554 4443321 22477
Q ss_pred HHHHHhHHHHHHHHHHhhcc-cCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhh
Q 020792 190 ILALIGTIPCLVQLIGLCFI-PESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRK 268 (321)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
.+.++..++.++..+..++. ++.|+ ++....+..+.+|++
T Consensus 212 ~~~~~~~~~~iv~~i~~~~~~~~~~~---------------------------------------~~~~~~~~~~vlk~~ 252 (462)
T PRK15034 212 NAAWIWVPLLAIATIAAWSGMNDIAS---------------------------------------SRASIADQLPVLQRL 252 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccc---------------------------------------cccCHHHHHHHhCCC
Confidence 77777777666665555443 33220 000111244566766
Q ss_pred hhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhh
Q 020792 269 YAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS 301 (321)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (321)
..|...+ ..++.++++.++.++.|+++++
T Consensus 253 ~~Wllsl----ly~~tFG~fvg~s~~lp~~~~~ 281 (462)
T PRK15034 253 HLWLLSL----LYLATFGSFIGFSAGFAMLAKT 281 (462)
T ss_pred chhHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 6554333 3344555577788889988866
No 59
>PRK10504 putative transporter; Provisional
Probab=99.87 E-value=1.8e-20 Score=171.70 Aligned_cols=166 Identities=19% Similarity=0.224 Sum_probs=142.3
Q ss_pred HHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhh
Q 020792 47 GSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKA 126 (321)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 126 (321)
..+....+.....+..|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+++.++++
T Consensus 18 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 97 (471)
T PRK10504 18 GFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGT 97 (471)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444444455567788899999999999999999999999999999999999999999999999999999888888999
Q ss_pred hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHH
Q 020792 127 AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQ 202 (321)
Q Consensus 127 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~ 202 (321)
.+.+++.|++.|++.+...+....++.|++|+++|+++.+....+..+|..++|.+++.+ +||+.|++......+.
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~ 177 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIG 177 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988888887655 8999999877766655
Q ss_pred HHHhh-cccCC
Q 020792 203 LIGLC-FIPES 212 (321)
Q Consensus 203 ~~~~~-~~~e~ 212 (321)
.+... ..|+.
T Consensus 178 ~~~~~~~~~~~ 188 (471)
T PRK10504 178 AIATLMLMPNY 188 (471)
T ss_pred HHHHHHhCCCc
Confidence 55443 34443
No 60
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=7.8e-22 Score=169.94 Aligned_cols=269 Identities=19% Similarity=0.182 Sum_probs=191.0
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcccccccchhcccccc--------CCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccc
Q 020792 32 SATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDL--------GLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGR 103 (321)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr 103 (321)
...|+.+..+.++.++.+.+.|+...++...|.+...+ +++....+.+..+..+|.++|++++|++.||+||
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34678888889999999999999999888877554432 2456677899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh-------hhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHH
Q 020792 104 RGTMGFSDIVCIIGWVIIVFSK-------AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGV 176 (321)
Q Consensus 104 r~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 176 (321)
|+++...++++++++++++++. -.+++.+.|+++|+|.|+.||...++.+|....+.||...+......++|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 9999999999999999777632 236788899999999999999999999999999999887777655555554
Q ss_pred HHHHHhh----cch---------------hhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCCh-HHHHHHHHHHhCCC
Q 020792 177 SMTYLIG----AFL---------------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKG-IESEAALQRLRGAD 236 (321)
Q Consensus 177 ~~~~~i~----~~~---------------~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~ 236 (321)
..+.+++ ..+ -||..+.+.++++++.+...+.+||++++..-..++ +++. .+..+..
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k~~ 270 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDMKKVL 270 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hcccccc
Confidence 4444333 222 399999998888888888888899998875222211 1111 1111110
Q ss_pred cchHHHHHHHHHHHHHHhcccccchhhhhhhhhhh--HHHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCc
Q 020792 237 ADISEEAAEIREYTETLERLSEGGILELFQRKYAH--SLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS 307 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 307 (321)
+...++.++. +.....++.+.....+....| +.++..+..++..-..++..+.+...+++..|+.+.
T Consensus 271 ---~~~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~ 339 (538)
T KOG0252|consen 271 ---SVDIEAESTA-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPS 339 (538)
T ss_pred ---ccccchhhcc-ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCC
Confidence 1000000000 111111122222222222223 567777888888888899999999999998887655
No 61
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=2e-20 Score=165.17 Aligned_cols=222 Identities=19% Similarity=0.273 Sum_probs=161.0
Q ss_pred ccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 020792 55 IGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGR 134 (321)
Q Consensus 55 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (321)
.....+.+|.+.+++|++.++.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+.. ..++.+.+++.|
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT 94 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 3455788899999999999999999999999999999999999999999999999998888887776 678888999999
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch------hhHHHHHHhHHHHHHHHHHhhc
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~------~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
++.|++.+...+..+.++.|++| ++|+++.+..+.+..+|..+++.+...+ +||+.|.+.+++.++... .+
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~ 171 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AW 171 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HH
Confidence 99999999888888889999986 5799999999999888888887766544 388888776654443322 23
Q ss_pred ccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhCh
Q 020792 209 IPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGV 288 (321)
Q Consensus 209 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (321)
+|+.++ +.+ ++ ++......++.+|++..+...+...+ ....+
T Consensus 172 ~~~~~~----~~~-------------~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 213 (355)
T TIGR00896 172 IPQVRR----RVA-------------AN-----------------QTTTRLTPVRIWRSPLAWQVTVFFGL----QSGLY 213 (355)
T ss_pred hhhhcc----ccC-------------CC-----------------CCCCCCCCchhhcCHhHHHHHHHHHH----HHHHH
Confidence 343311 000 00 00011223455665554433322222 22234
Q ss_pred hhHHHcHHHHHhhcCCCCchHHHHHHHHHH
Q 020792 289 NGIAFYASSIFISAGFSGSIGMIAMVVIQV 318 (321)
Q Consensus 289 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~i 318 (321)
+....|.|.++++.|.+....+...++..+
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~ 243 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQL 243 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 566778899998889988766655555433
No 62
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.86 E-value=3.2e-20 Score=166.54 Aligned_cols=164 Identities=14% Similarity=0.124 Sum_probs=140.8
Q ss_pred HHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 020792 43 VAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV 122 (321)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 122 (321)
.++...+..++..+...+.+|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||++++++.++.+++..+..
T Consensus 7 ~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~ 86 (410)
T TIGR00885 7 LITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFW 86 (410)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 33444555566666778889999999999999999999999999999999999999999999999999999999988764
Q ss_pred H---hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-------------
Q 020792 123 F---SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------------- 186 (321)
Q Consensus 123 ~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~------------- 186 (321)
. .++++.+++.|++.|++.|...+....++.+..|+++|++..++.+...++|..++|.++..+
T Consensus 87 ~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 87 PAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred HHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 4 358899999999999999999999999999999999999999999999999988888776433
Q ss_pred -----------------hhHHHHHHhHHHHHHHHHHh
Q 020792 187 -----------------NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 187 -----------------~w~~~~~~~~~~~~~~~~~~ 206 (321)
+||++|++.+++.++..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 49999998887766554443
No 63
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.86 E-value=6.4e-20 Score=164.52 Aligned_cols=147 Identities=19% Similarity=0.258 Sum_probs=123.2
Q ss_pred cccchhc-cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh--------hhhH
Q 020792 58 SSPAQSG-ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS--------KAAW 128 (321)
Q Consensus 58 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~ 128 (321)
..+.+|. +++++|.|+.+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+++...+.++ .+++
T Consensus 34 ~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (399)
T PRK05122 34 PLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLL 113 (399)
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHH
Confidence 3455564 678999999999999999999999999999999999999999999998888776655442 2566
Q ss_pred HHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHH
Q 020792 129 WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI 204 (321)
Q Consensus 129 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~ 204 (321)
.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|..+++.+++.+ +|++.+++..+..++..+
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 193 (399)
T PRK05122 114 LLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLL 193 (399)
T ss_pred HHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999998888888887777777554 899888776665544433
No 64
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.86 E-value=5e-20 Score=164.72 Aligned_cols=149 Identities=15% Similarity=0.146 Sum_probs=125.1
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhh
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGM 141 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 141 (321)
.+.+.++++.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++.+++.+..+. ++.|+++|++.
T Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~ 102 (393)
T PRK11195 26 AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGA 102 (393)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 334567889999999999999999999999999999999999999999999998888877776653 67899999999
Q ss_pred hhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHHHHHHHHHHhhcccCCh
Q 020792 142 GLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLCFIPESP 213 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~~~~~~~~~~~~~~e~~ 213 (321)
+...|...+++.|++|+++|++++++......+|..++|.+++.+ .|+..+.+.+...++..+..+.+||++
T Consensus 103 a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 103 AAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999877 445555544444344444445677764
No 65
>PRK12382 putative transporter; Provisional
Probab=99.86 E-value=1.4e-19 Score=161.89 Aligned_cols=144 Identities=17% Similarity=0.211 Sum_probs=119.8
Q ss_pred ccccchh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH---HH-----hhhh
Q 020792 57 YSSPAQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII---VF-----SKAA 127 (321)
Q Consensus 57 ~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~-----~~~~ 127 (321)
...+.+| ++++++|+|..+.|++.+++.+++.++++++|+++||+|||++++.+.+...++.+.. +. .+++
T Consensus 33 ~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (392)
T PRK12382 33 LPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKF 112 (392)
T ss_pred HHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Confidence 3355566 3678999999999999999999999999999999999999999999888776654432 11 3578
Q ss_pred HHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHH
Q 020792 128 WWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCL 200 (321)
Q Consensus 128 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~ 200 (321)
+.+++.|+++|++.+...+...+++.|++|+++|+++++....+..+|..++|.+++.+ +|++.+.+..+..+
T Consensus 113 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 189 (392)
T PRK12382 113 ALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPL 189 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Confidence 88999999999999988888889999999999999999999998888888888877654 88877665544433
No 66
>PRK10054 putative transporter; Provisional
Probab=99.86 E-value=2.2e-20 Score=167.13 Aligned_cols=149 Identities=15% Similarity=0.171 Sum_probs=131.7
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 143 (321)
++++++|++..+.|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.++.++++.++++|.+.|.+.+.
T Consensus 33 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 112 (395)
T PRK10054 33 YLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSV 112 (395)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999999988889999999888899998888777
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHHHHHHHHHHh-hcccCC
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGL-CFIPES 212 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~~~~~~~~~~-~~~~e~ 212 (321)
..+....+..|..|+++|+++.++.+...++|..++|.+++.+ +|+.+|++.+++.++..+.. +++||+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 113 FSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7888899999999999999999999999999999999888776 89999998877766665444 345554
No 67
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=2.4e-20 Score=159.97 Aligned_cols=222 Identities=21% Similarity=0.248 Sum_probs=168.9
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHH
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAA---WWLDLGRL 135 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 135 (321)
++..+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++..+-++..+++.+. +.+++++.
T Consensus 34 s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl 113 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL 113 (417)
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 455556889999999999999999999999999999999999999999999999999999998887554 49999999
Q ss_pred HHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHH----HHHHHhhcchh---hHHHHHHhHHHHHHHHHHh-h
Q 020792 136 LVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGV----SMTYLIGAFLN---WRILALIGTIPCLVQLIGL-C 207 (321)
Q Consensus 136 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~----~~~~~i~~~~~---w~~~~~~~~~~~~~~~~~~-~ 207 (321)
++|++ |..+.+...+++++||+|++|.++|++. ..++|. .++|.+....+ |+.+..+..+..++..+.. +
T Consensus 114 l~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 114 LLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred HHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 5679999999999999999999999997 656664 45666666667 9988888777766655555 4
Q ss_pred cccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhC
Q 020792 208 FIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGG 287 (321)
Q Consensus 208 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (321)
...+.|......+ +..+..++..++++..|. +++..+..+++
T Consensus 192 ~~~d~p~~r~~~~----------------------------------~~~~~~~~~v~~~~~~W~----lsllY~~tFG~ 233 (417)
T COG2223 192 GMNDVPEHRASVK----------------------------------PQLPAQLKAVFSNKDTWL----LSLLYFATFGG 233 (417)
T ss_pred HhCCChhhhcccc----------------------------------ccchhHHHHHhcCcchHH----HHHHHHHHHHH
Confidence 4554442100000 000022444555555444 33444445556
Q ss_pred hhhHHHcHHHHHhhc-CCCCchHHHHHHHHHHhc
Q 020792 288 VNGIAFYASSIFISA-GFSGSIGMIAMVVIQVID 320 (321)
Q Consensus 288 ~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~i~g 320 (321)
+.++..++|.|+++. |+++.+++.....+.++|
T Consensus 234 Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g 267 (417)
T COG2223 234 FVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIG 267 (417)
T ss_pred HHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHH
Confidence 889999999999988 999988877766666554
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.86 E-value=8.9e-20 Score=163.48 Aligned_cols=148 Identities=18% Similarity=0.301 Sum_probs=132.3
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 143 (321)
++.+++|+|..+.|++.+...+...+.+++.|+++||+|||+++..+.++.+++.+++.+.++.+.+++.|++.|++.+.
T Consensus 36 ~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~ 115 (400)
T PRK11646 36 RFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTL 115 (400)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 47788999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHHHHHHHHHHh-hcccC
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGL-CFIPE 211 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~~~~~~~~~~-~~~~e 211 (321)
..+...+++.|++|+++|+++.++.+....+|..++|.+++.+ +|++.|++.+...++..+.. ++.||
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 116 FDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8888899999999999999999999999999999999888776 89999998877666554433 44454
No 69
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.85 E-value=7.3e-20 Score=164.26 Aligned_cols=221 Identities=17% Similarity=0.074 Sum_probs=150.6
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH---H-hhhhHHHHHHHHHH
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV---F-SKAAWWLDLGRLLV 137 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~l~ 137 (321)
++.+.+++|.++.+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.+++..++. . ..+++.+++.|++.
T Consensus 36 ~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~ 115 (402)
T TIGR00897 36 LSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIR 115 (402)
T ss_pred HHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHH
Confidence 3445578999999999999999999999999999999999999999999999888876543 3 25788888999999
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHH-HHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccC
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGV-SMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPE 211 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e 211 (321)
|++.+...+....++.+++|+++|++++++.+.+.++|. .++|.+++.+ +|+..++......++..+.. ++.++
T Consensus 116 G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 116 GLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKD 195 (402)
T ss_pred HcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999888777778888999999999999999999999986 5778776543 66555444333333333332 33333
Q ss_pred ChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhH
Q 020792 212 SPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGI 291 (321)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (321)
.++. +.++ +++ +.++ ....+++++|++..+...+. .+......+.+
T Consensus 196 ~~~~---~~~~-----------~~~-----~~~~-----------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 241 (402)
T TIGR00897 196 IFTP---QHMQ-----------TRE-----KFSE-----------LGKAATILFTNPNVLLGGMV----RIINTIGLFGF 241 (402)
T ss_pred CCCc---cccc-----------CCc-----chhh-----------HHHHHHHHHcChhHHHHHHH----HHHHHHHHHHH
Confidence 2110 0000 000 0000 00113345666554433322 22233345677
Q ss_pred HHcHHHHHhhcCCCCchHHHHHHHH
Q 020792 292 AFYASSIFISAGFSGSIGMIAMVVI 316 (321)
Q Consensus 292 ~~~~~~~~~~~g~s~~~~~~~~~~~ 316 (321)
..|.|.+.++.|++..+.....++.
T Consensus 242 ~~~~p~~~~~~g~s~~~~~~~~~~~ 266 (402)
T TIGR00897 242 AVFLPMFVAELGFSTSEWLQIWGTF 266 (402)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHH
Confidence 8899999988899887665555443
No 70
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.84 E-value=2.3e-19 Score=159.40 Aligned_cols=162 Identities=14% Similarity=0.178 Sum_probs=127.2
Q ss_pred hhcccccccchh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHH-HHHHHHHHHHHHHHhhhhHH
Q 020792 52 GSAIGYSSPAQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGF-SDIVCIIGWVIIVFSKAAWW 129 (321)
Q Consensus 52 ~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~ 129 (321)
+...+...+.+| ++++++|.|..+.|++.+.+.++..+.+++.|+++||+|||+.+++ +.+..+++..+++++++++.
T Consensus 10 ~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (375)
T TIGR00899 10 GIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFL 89 (375)
T ss_pred HHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 333334455555 4678999999999999999999999999999999999999887654 55666677778888999999
Q ss_pred HHHHHHHHhhhhhhhcchhhhhhhccCCCccchhH--HhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHH
Q 020792 130 LDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF--TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQL 203 (321)
Q Consensus 130 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~ 203 (321)
+++.|++.|.+.+...+....+..|+.|++.|+.. .+....+.++|..++|.+++.+ +||+.|++.+++.++..
T Consensus 90 l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~ 169 (375)
T TIGR00899 90 LLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCG 169 (375)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999888777788888888999887777643 5666777777877777776554 89999999888766665
Q ss_pred HHh-hcccCCh
Q 020792 204 IGL-CFIPESP 213 (321)
Q Consensus 204 ~~~-~~~~e~~ 213 (321)
+.. +++||.|
T Consensus 170 ~~~~~~~~~~~ 180 (375)
T TIGR00899 170 VLVWLFLPSYP 180 (375)
T ss_pred HHHHHhCCCcc
Confidence 554 4477765
No 71
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.84 E-value=3.9e-19 Score=158.57 Aligned_cols=143 Identities=25% Similarity=0.332 Sum_probs=115.1
Q ss_pred CChhhHHHHHHH-----HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhH--------HHHHHHHHH
Q 020792 71 LSVAEYSLFGSI-----LTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAW--------WLDLGRLLV 137 (321)
Q Consensus 71 ~s~~~~~~~~~~-----~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~ 137 (321)
.++.+.+...+. ..++..+++++.|+++||+|||+++.++.++.+++.++++++++++ .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 445555554433 3334457899999999999999999999999999999999988764 478889999
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhc------------chhhHHHHHHhHHHHHHHHHH
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGA------------FLNWRILALIGTIPCLVQLIG 205 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~------------~~~w~~~~~~~~~~~~~~~~~ 205 (321)
|++.+...+....++.|++|+++|++..+....+..+|..+++.++. ..+||+.|++.+++.++..+.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888887653 237999998877766665554
Q ss_pred hhcccCCh
Q 020792 206 LCFIPESP 213 (321)
Q Consensus 206 ~~~~~e~~ 213 (321)
....||++
T Consensus 187 ~~~~~~~~ 194 (394)
T TIGR00883 187 RRNLEETP 194 (394)
T ss_pred HHhcCCCh
Confidence 45566654
No 72
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.84 E-value=4.2e-19 Score=155.78 Aligned_cols=163 Identities=31% Similarity=0.506 Sum_probs=144.4
Q ss_pred HHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh
Q 020792 46 CGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK 125 (321)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 125 (321)
+..+..........+..|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+.++.++..++.++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 85 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFAS 85 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhc
Confidence 33444455555567777888889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHH
Q 020792 126 AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLV 201 (321)
Q Consensus 126 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~ 201 (321)
+++.+.+.|++.|++.+...+...+++.|++|+++|++..+..+....+|..++|.+++.+ +|++.+++.+++.++
T Consensus 86 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (352)
T cd06174 86 SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLL 165 (352)
T ss_pred cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888766 699999988877776
Q ss_pred HHHHhhc
Q 020792 202 QLIGLCF 208 (321)
Q Consensus 202 ~~~~~~~ 208 (321)
..+..++
T Consensus 166 ~~~~~~~ 172 (352)
T cd06174 166 LALLLLF 172 (352)
T ss_pred HHHHHHH
Confidence 6655543
No 73
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.83 E-value=1.3e-19 Score=163.56 Aligned_cols=155 Identities=15% Similarity=0.140 Sum_probs=131.2
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-----hhhhHHHHHH
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF-----SKAAWWLDLG 133 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 133 (321)
.+.+|.+.++++.+..+.|++.+...++..+++++.|+++||+|||+++..+.++.+++....+. .++++.+.+.
T Consensus 37 ~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 116 (417)
T PRK10489 37 GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLL 116 (417)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 45566677888889999999999999999999999999999999999998888777776655432 4677888899
Q ss_pred HHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 134 RLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 134 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
|++.|++.+...+...+++.|+.|+++|+++.++.+.+..+|..++|.+++.+ +|++.+++.++..++..+..+.+
T Consensus 117 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (417)
T PRK10489 117 GLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL 196 (417)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998888888899999999999999999999999999999999888765 79999988777776666666667
Q ss_pred cCCh
Q 020792 210 PESP 213 (321)
Q Consensus 210 ~e~~ 213 (321)
|+++
T Consensus 197 ~~~~ 200 (417)
T PRK10489 197 PALP 200 (417)
T ss_pred CCCC
Confidence 7653
No 74
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.83 E-value=1.2e-18 Score=156.64 Aligned_cols=163 Identities=21% Similarity=0.190 Sum_probs=135.2
Q ss_pred HHHhhcccccccchhccccccCCChhh-----HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 020792 49 YVFGSAIGYSSPAQSGITNDLGLSVAE-----YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF 123 (321)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 123 (321)
++.+.......+.+|.+.+++|++..+ .+++.++..++..++.+++|+++||+|||+++..+.+..+++.+++.+
T Consensus 24 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 103 (408)
T PRK09874 24 FLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL 103 (408)
T ss_pred HHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH
Confidence 333344444567788888889988654 488999999999999999999999999999999999999999988888
Q ss_pred hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHH
Q 020792 124 SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPC 199 (321)
Q Consensus 124 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~ 199 (321)
.++++.+++.|++.|++.+ ..+....++.|.+|+++|+++.+..+.+..+|..++|.+++.+ +||+.|++.+++.
T Consensus 104 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (408)
T PRK09874 104 AQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVL 182 (408)
T ss_pred HhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 9999999999999999854 5677778899999999999999999999999988888887654 8999999888776
Q ss_pred HHHHHHh-hcccCC
Q 020792 200 LVQLIGL-CFIPES 212 (321)
Q Consensus 200 ~~~~~~~-~~~~e~ 212 (321)
++..+.. +++||+
T Consensus 183 ~~~~~~~~~~~~~~ 196 (408)
T PRK09874 183 FLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHhccC
Confidence 6655544 345554
No 75
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.81 E-value=1.6e-18 Score=153.12 Aligned_cols=224 Identities=15% Similarity=0.133 Sum_probs=153.0
Q ss_pred ccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc-----cchHH-HHHHHHHHHHHHHHHHHh---hhh
Q 020792 57 YSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI-----GRRGT-MGFSDIVCIIGWVIIVFS---KAA 127 (321)
Q Consensus 57 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~ 127 (321)
...+..|.+.+++|+|.++.++..+. .+...+ .+++|+++||+ |||+. ++.+.++.+++....++. .+.
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 34566778899999999999999755 444444 89999999998 89887 466677777776666665 455
Q ss_pred HHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----h--------hHHHHHHh
Q 020792 128 WWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----N--------WRILALIG 195 (321)
Q Consensus 128 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~--------w~~~~~~~ 195 (321)
+.+....++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.++..+ + ||..|++.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ 163 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWT 163 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHH
Confidence 66777777888888888888999999999999999999999999999999888887544 6 99999988
Q ss_pred HHHHHHHHHHhhc-ccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHH
Q 020792 196 TIPCLVQLIGLCF-IPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLI 274 (321)
Q Consensus 196 ~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (321)
++..++..+..++ .||+++. ++ +.+++ +++ ....++++++++..++.+
T Consensus 164 ai~~l~~~~~~~~~~~e~~~~-----~~---------------~~~~~----~~~-------~~~~~~~~~~~~~~~~~~ 212 (356)
T TIGR00901 164 ALLILPGLLVTLFLAKEPQED-----AS---------------VPKPL----TQA-------VLKPIREFFQRKNMIQAL 212 (356)
T ss_pred HHHHHHHHHHHHHhccCCCcc-----cc---------------cchhH----HHH-------HHHHHHHHHHhcCchHHH
Confidence 8877766655443 4554210 00 00000 000 011244555554422222
Q ss_pred HHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCchHHHHHH
Q 020792 275 VGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMV 314 (321)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 314 (321)
.......+. ....+....+.|.++++.|+++.+.+.+.+
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~ 251 (356)
T TIGR00901 213 LLLLLIVLY-KLGDSAATVLTTLFLLDMGFSKEEIALVAK 251 (356)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHhH
Confidence 222222222 223456677788888888988876655444
No 76
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.80 E-value=1.1e-17 Score=140.82 Aligned_cols=240 Identities=19% Similarity=0.215 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHH
Q 020792 38 VLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIG 117 (321)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 117 (321)
+..+..+.+..+.....++.++|.++.+++++|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45555566667777888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh----cch-hhHHHH
Q 020792 118 WVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG----AFL-NWRILA 192 (321)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~----~~~-~w~~~~ 192 (321)
..+.... +.+.++.+..+.|.+.+..+...+..+-+.||+| -+.++++|....++|+.+++.+. ... +||...
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL 168 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGAL 168 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHH
Confidence 9998887 7788899999999999999999999999999965 58999999888888766665444 444 799999
Q ss_pred HHhHHHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhH
Q 020792 193 LIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHS 272 (321)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (321)
.+-+.+++++++.++ |...+ .+ ....+.+..+-..+++++.-|.
T Consensus 169 ~~WAl~allAl~~Wl--Pq~~r-----~~-----------------------------~~~~~~~~~~~~~vw~~~~aW~ 212 (395)
T COG2807 169 GFWALLALLALLIWL--PQALR-----EQ-----------------------------AASIATKLVSVRKVWRSPLAWQ 212 (395)
T ss_pred HHHHHHHHHHHHHHh--hhccc-----cc-----------------------------ccccccccccccccccCchhHH
Confidence 988888888877664 32110 00 0001112223345777776666
Q ss_pred HHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCchHHHHHHHHHHh
Q 020792 273 LIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQVI 319 (321)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~i~ 319 (321)
+.+-+.+ +...+|....|+|.++.|.|+|..+++.+.++.++.
T Consensus 213 vtLfmGl----qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~ 255 (395)
T COG2807 213 VTLFMGL----QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLA 255 (395)
T ss_pred HHHHHHh----hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHH
Confidence 5554443 444588999999999999999999999888877765
No 77
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.80 E-value=6.5e-19 Score=160.93 Aligned_cols=180 Identities=18% Similarity=0.259 Sum_probs=138.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHH
Q 020792 34 TSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIV 113 (321)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 113 (321)
.++.+..+...++......+........++.+..++|- .....|+.+...++..++.++.|+++|.||||++++.+.++
T Consensus 39 s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l 117 (599)
T PF06609_consen 39 SPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLL 117 (599)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Confidence 34444444444444444445555556677889999985 46778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhH
Q 020792 114 CIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWR 189 (321)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~ 189 (321)
.++++++++.++|...++++..+.|++.|... .....++|..|.|.|....++...........++.++..+ +||
T Consensus 118 ~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WR 196 (599)
T PF06609_consen 118 GVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWR 196 (599)
T ss_pred HHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcc
Confidence 99999999999999999999999999977665 4566689999999998777766665555444556666444 899
Q ss_pred HHHHHhHHHHHHHHHHhhcccCChHH
Q 020792 190 ILALIGTIPCLVQLIGLCFIPESPRW 215 (321)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~e~~~~ 215 (321)
|.|++.++...+.++..+++..+|++
T Consensus 197 w~~~~~~i~~~i~~vl~~~fY~PP~~ 222 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLIFFFYFPPPR 222 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 99999888877766655444444443
No 78
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.80 E-value=1.3e-18 Score=160.04 Aligned_cols=170 Identities=16% Similarity=0.146 Sum_probs=130.2
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHH-H--HHhhhhHHHHHHHHHHhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVI-I--VFSKAAWWLDLGRLLVGYGM 141 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~G~~~ 141 (321)
+.+.+|.+..+.++..+...++..++.++.|+++||+|||+++.++.++..++... . ..+++...+++++++.|++.
T Consensus 277 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 356 (490)
T PRK10642 277 LSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVIL 356 (490)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 55678999888888888899999999999999999999999988887654433322 2 22345667778889888887
Q ss_pred hhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHhhcccCChHHH
Q 020792 142 GLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPESPRWL 216 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 216 (321)
+...+....++.|.+|++.|+++.+..+....+++.++|.+.+++ +|+.++++..+++++.++..+++||+|+++
T Consensus 357 ~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~ 436 (490)
T PRK10642 357 NCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRP 436 (490)
T ss_pred HHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 777777888899999999999998874444445556677666554 477777766677777776667789999987
Q ss_pred Hhc-----CChHHHHHHHHHHhC
Q 020792 217 AKT-----GKGIESEAALQRLRG 234 (321)
Q Consensus 217 ~~~-----~~~~~~~~~~~~~~~ 234 (321)
.++ ++.+|+++.+++.+.
T Consensus 437 ~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 437 LKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred CCCccccccchhhHHHHhhcccc
Confidence 654 788888888888863
No 79
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=1.2e-18 Score=147.11 Aligned_cols=121 Identities=21% Similarity=0.251 Sum_probs=109.7
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 144 (321)
..+..+.+..-.|.+.+.+.+...+.++.+|.++||+|||++++++++..++...+.+.+.|+..++++|++.|+..|.
T Consensus 59 ~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn- 137 (451)
T KOG2615|consen 59 IGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN- 137 (451)
T ss_pred hCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-
Confidence 3344444556689999999999999999999999999999999999999999999999999997777779999999865
Q ss_pred cchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 145 SYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
..+..++++|.+++|+|+.+++....++.+|.++||++++++
T Consensus 138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 677889999999999999999999999999999999999887
No 80
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.79 E-value=6.7e-18 Score=150.55 Aligned_cols=230 Identities=13% Similarity=0.017 Sum_probs=153.5
Q ss_pred HHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHH-HHHHHHH-HHHHHhhh
Q 020792 49 YVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSD-IVCIIGW-VIIVFSKA 126 (321)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~-~~~~~~~-~~~~~~~~ 126 (321)
+.+....+...|++|.+.+++|.|..+.|++.+.+.++..++++++|+++||+|||....... ...++.. .....+++
T Consensus 14 ~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 93 (382)
T TIGR00902 14 FGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHN 93 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 333334455577888888999999999999999999999999999999999999854332221 1111222 23446788
Q ss_pred hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHH
Q 020792 127 AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQ 202 (321)
Q Consensus 127 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~ 202 (321)
++.+++.|++.|.+.+...+...++..++ +++|++..+....+.++|.+++|.+++.+ |||..|++.+...++.
T Consensus 94 ~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~ 171 (382)
T TIGR00902 94 AWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFM 171 (382)
T ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 99999999999988888888888887664 46688999999998889998888877665 8999988766553333
Q ss_pred HHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHH
Q 020792 203 LIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVL 282 (321)
Q Consensus 203 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (321)
++ .+.++++++ +.+++ + + ++..+..+.++++|++..+...+..++...
T Consensus 172 ~~-~~~~~~~~~----~~~~~--------------~--~-----------~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~ 219 (382)
T TIGR00902 172 LI-GFLIKPTIP----PKDAI--------------P--E-----------DESQGDSAFIALLKNPMNLRFLAAVCLIQG 219 (382)
T ss_pred HH-HHHcCCCCC----CCccc--------------c--c-----------cccccchhHHHHHcChHHHHHHHHHHHHHH
Confidence 32 233333310 00000 0 0 000011234567777665555444333333
Q ss_pred HHhhChhhHHHcHHHHHhhcCCCCchHHHHHHHH
Q 020792 283 QQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVI 316 (321)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 316 (321)
.......|.|.++++.|.++...+.+.++.
T Consensus 220 ----~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~ 249 (382)
T TIGR00902 220 ----AHAAYYGFSAIYWQAAGISASATGLLWGIG 249 (382)
T ss_pred ----HHHHHHHHHHHHHHHCCCCHhHHHHHHHHH
Confidence 245566677888888899988777666543
No 81
>PTZ00207 hypothetical protein; Provisional
Probab=99.79 E-value=6.1e-18 Score=155.42 Aligned_cols=167 Identities=19% Similarity=0.147 Sum_probs=132.2
Q ss_pred cchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh------hhhHHHHHH
Q 020792 60 PAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS------KAAWWLDLG 133 (321)
Q Consensus 60 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~ 133 (321)
.+.+.+++++|++..+.+++.++. ....+++++.|+++||+|||++++++.+++.++.++++++ ++++.+.+.
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~ 126 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVY 126 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHH
Confidence 455668999999999999988774 4455677889999999999999999999999999999987 689999999
Q ss_pred HHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHH-HHHhhcch--hhHHHHHHhHHHHHHHHHHh-hcc
Q 020792 134 RLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSM-TYLIGAFL--NWRILALIGTIPCLVQLIGL-CFI 209 (321)
Q Consensus 134 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~i~~~~--~w~~~~~~~~~~~~~~~~~~-~~~ 209 (321)
|++.|++.+..++.....+.++|| ++||++.++...+.++|+.+ +++...++ +|+..|++.+++.++..++. +++
T Consensus 127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999999999999999997 67999999999999999875 55555555 78888888887766655544 444
Q ss_pred --cCChHHHHhcCChHHHHHH
Q 020792 210 --PESPRWLAKTGKGIESEAA 228 (321)
Q Consensus 210 --~e~~~~~~~~~~~~~~~~~ 228 (321)
|+.+++..++++.+++++.
T Consensus 206 r~p~~~~~~~~~~~~~~~~~~ 226 (591)
T PTZ00207 206 RLPPFHLTGYQEKHLDEEEKA 226 (591)
T ss_pred eCCcchhhcccccCCCHHHHH
Confidence 4334443334433444443
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.7e-17 Score=141.76 Aligned_cols=235 Identities=16% Similarity=0.154 Sum_probs=180.3
Q ss_pred HHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH---
Q 020792 46 CGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV--- 122 (321)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--- 122 (321)
...++.++......+.+|.+++.++++..|++++...++.|+.+++++.|++.+|+|+|+-+++|+.++++++.+..
T Consensus 20 ~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa 99 (422)
T COG0738 20 SLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAA 99 (422)
T ss_pred HHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhh
Confidence 33444455555667889999999999999999999999999999999999999999999999999999999998875
Q ss_pred HhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----------------
Q 020792 123 FSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---------------- 186 (321)
Q Consensus 123 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---------------- 186 (321)
...++..++++-++.|.|.+...+.++.++..+.+++.-...+.+.+..+.+|..++|++++.+
T Consensus 100 ~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~ 179 (422)
T COG0738 100 SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILA 179 (422)
T ss_pred hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHH
Confidence 5678889999999999999999999999999999998778889999999999999999888654
Q ss_pred -------hhHHHHHHhHHHHHHHHHHhhcc--cCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhccc
Q 020792 187 -------NWRILALIGTIPCLVQLIGLCFI--PESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLS 257 (321)
Q Consensus 187 -------~w~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (321)
.|+++|...+...++..+..... |+.+.. .+++.+.+
T Consensus 180 ~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~----------------------------------~~~~~~~~ 225 (422)
T COG0738 180 IKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA----------------------------------APSLGASG 225 (422)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc----------------------------------cccccccc
Confidence 36777877776655555544332 332100 00000111
Q ss_pred ccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHHHHHhh-cCCCCchHHHHHHHHHH
Q 020792 258 EGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGSIGMIAMVVIQV 318 (321)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~i 318 (321)
+....+++++++.+.-.+..+++... -..+..|++.|+.+ .|++..++....+....
T Consensus 226 ~~~~~~l~~~~~~~~gvl~~FlYVG~----Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~ 283 (422)
T COG0738 226 SAGLSSLFQNKHLRLGVLAIFLYVGA----EVAIGSFLVSYLEELLGLNEQQAAYYLSFFWV 283 (422)
T ss_pred cchHHHHHhChHHHHHHHHHHHHHhH----HHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 11466778877776666666666665 45677888888888 48888877666555443
No 83
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.79 E-value=1.4e-17 Score=152.93 Aligned_cols=155 Identities=13% Similarity=0.221 Sum_probs=124.6
Q ss_pred ccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc-----cchHH-HHHHHHHHHHHHHHHHHh---hhh
Q 020792 57 YSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI-----GRRGT-MGFSDIVCIIGWVIIVFS---KAA 127 (321)
Q Consensus 57 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~ 127 (321)
...+.+|...++.|.+.++.+.+ +.....+ ++.+++|+++||+ |||+. ++++.+..+++...+++. +++
T Consensus 30 ~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l 107 (491)
T PRK11010 30 LTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQL 107 (491)
T ss_pred HHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchH
Confidence 34556676778889999999986 3333433 6889999999999 99985 667777777777777664 467
Q ss_pred HHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc-----hhhHHHHHHhHHHHHHH
Q 020792 128 WWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF-----LNWRILALIGTIPCLVQ 202 (321)
Q Consensus 128 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~-----~~w~~~~~~~~~~~~~~ 202 (321)
+.+.+.+++.+++.+...+...++..|++|+++|+++.++...+..+|.++++.+... .|||..|++.+++.++.
T Consensus 108 ~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~ 187 (491)
T PRK11010 108 RWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPC 187 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 7888899999999999999999999999999999999999999999998888755533 48999999988887777
Q ss_pred HHHhhcccCCh
Q 020792 203 LIGLCFIPESP 213 (321)
Q Consensus 203 ~~~~~~~~e~~ 213 (321)
.+..++.||++
T Consensus 188 ~l~~~~~~e~~ 198 (491)
T PRK11010 188 IIATLLAPEPT 198 (491)
T ss_pred HHHHHhcCCCc
Confidence 66656677763
No 84
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.79 E-value=9.6e-18 Score=149.56 Aligned_cols=222 Identities=13% Similarity=0.048 Sum_probs=147.7
Q ss_pred ccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccch----HHHHHHHHHHHHHHHHHHHhhhhHHH
Q 020792 55 IGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRR----GTMGFSDIVCIIGWVIIVFSKAAWWL 130 (321)
Q Consensus 55 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~~ 130 (321)
.+...|.+|.+.+++|.|..+.|++.+++.++..++++++|+++||+||| +.+.+...+ .........++++.+
T Consensus 20 ~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 97 (382)
T PRK11128 20 YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFGAHSFWLL 97 (382)
T ss_pred HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHhcccHHHH
Confidence 34456777777888999999999999999999999999999999999984 333222221 122233445889999
Q ss_pred HHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh
Q 020792 131 DLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 131 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~ 206 (321)
++.|++.|++.+...+...++..++ .++|+++.+....+..+|..++|.+++.+ +||..|++.++..++..+..
T Consensus 98 ~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~ 175 (382)
T PRK11128 98 FVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ 175 (382)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH
Confidence 9999999999888888887887776 34577777777777778888888777665 99999987776555444433
Q ss_pred hcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhh
Q 020792 207 CFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFG 286 (321)
Q Consensus 207 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (321)
++.||+++ +++++ + ..++...++++++|++..+......++....
T Consensus 176 ~~~~~~~~----~~~~~------------------~----------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~--- 220 (382)
T PRK11128 176 LLRPTIMP----QGESR------------------Q----------QESAGWPAWKALLKEPTVWRFLLCVSLLQGS--- 220 (382)
T ss_pred HccCCCCC----ccccc------------------c----------ccccccchHHHHHcChhHHHHHHHHHHHHHH---
Confidence 44454311 00000 0 0000123456777776665544433333332
Q ss_pred ChhhHHHcHHHHHhhcCCCCchHHHHHHHH
Q 020792 287 GVNGIAFYASSIFISAGFSGSIGMIAMVVI 316 (321)
Q Consensus 287 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 316 (321)
......+.|.+.++.|.++...+...++.
T Consensus 221 -~~~~~~~~~~~~~~~g~s~~~~g~~~~~~ 249 (382)
T PRK11128 221 -HAAYYGFSAIYWQAAGYSASTIGYLWSLG 249 (382)
T ss_pred -hHhHHHHHHHHHHHCCCCHhHHHHHHHHH
Confidence 33455666778788899887666655544
No 85
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.78 E-value=1.3e-17 Score=149.75 Aligned_cols=164 Identities=17% Similarity=0.203 Sum_probs=130.7
Q ss_pred HHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc-----cchH-HHHHHHHHHHHHHHHH
Q 020792 48 SYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI-----GRRG-TMGFSDIVCIIGWVII 121 (321)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~ 121 (321)
++..+...+.....+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||+ .+.++.++.+++....
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 34444455555667777777889999999999777766 58999999999999 8775 7888888888877777
Q ss_pred HHh---hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc-----hhhHHHHH
Q 020792 122 VFS---KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF-----LNWRILAL 193 (321)
Q Consensus 122 ~~~---~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~-----~~w~~~~~ 193 (321)
++. .+.+.+++..++.++..+...+...+++.|++|+++|+++.++...+..+|..+++.++.. .+||..|+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~ 165 (402)
T PRK11902 86 AFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYL 165 (402)
T ss_pred HhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHH
Confidence 775 3567777787888888888889999999999999999999999999988888888775533 38999999
Q ss_pred HhHHHHHHHHHHhhcccCCh
Q 020792 194 IGTIPCLVQLIGLCFIPESP 213 (321)
Q Consensus 194 ~~~~~~~~~~~~~~~~~e~~ 213 (321)
+.+++.++..+..++.||++
T Consensus 166 i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 166 LMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHhcCCCc
Confidence 98887766655555667653
No 86
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.3e-18 Score=155.76 Aligned_cols=253 Identities=19% Similarity=0.210 Sum_probs=177.8
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHH
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLG-RLLV 137 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ 137 (321)
+...+.++++++.+.++.+|+.++......+.+|+.+.+.||+|.|.+.+.|.++..++.++.++++++|.+++. .++.
T Consensus 66 Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~ 145 (509)
T KOG2504|consen 66 GLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIG 145 (509)
T ss_pred hhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 466778999999999999999999999999999999999999999999999999999999999999999988777 5888
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcccC-C
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPE-S 212 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e-~ 212 (321)
|+|.|..+.....++..+|++ +|+.++|+...+.++|.++-|.+...+ |||+.+++.+.+.+-.++....+++ +
T Consensus 146 G~G~~~~~~paiviv~~YF~k-kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~ 224 (509)
T KOG2504|consen 146 GLGLGLIYLPAVVILGTYFEK-KRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLS 224 (509)
T ss_pred hccchhhhcchhhhhhhHhHH-HHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999988875 499999999999999998888777666 9999999888887666655544432 2
Q ss_pred hHHHHhcCChHHHHHHHH------------HHhCCCcchH----HHHHHHHHHHHHHh--cccccch---hhhhhhhhhh
Q 020792 213 PRWLAKTGKGIESEAALQ------------RLRGADADIS----EEAAEIREYTETLE--RLSEGGI---LELFQRKYAH 271 (321)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~ 271 (321)
+... +..+++.+..+ .....+.... ....+.++..++.. ..+.... .+++++
T Consensus 225 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~---- 297 (509)
T KOG2504|consen 225 PPKK---PNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKD---- 297 (509)
T ss_pred cCCC---chhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcC----
Confidence 1100 00000000000 0000000000 00000000000000 0001111 344444
Q ss_pred HHHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCchHHHHHHHHHHh
Q 020792 272 SLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQVI 319 (321)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~i~ 319 (321)
+.++.+.+.......+++....|+|.+.++.|++...++.++++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~ 345 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVS 345 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHh
Confidence 445555555555566788899999999999999999888887777654
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.77 E-value=6e-17 Score=148.07 Aligned_cols=145 Identities=16% Similarity=0.195 Sum_probs=128.1
Q ss_pred ccccc--cCCChhhHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 020792 64 GITND--LGLSVAEYSLFGSILTIGAMIGAIMSGKIADY-IGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYG 140 (321)
Q Consensus 64 ~~~~~--~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 140 (321)
++.++ +|++..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++.+++.++.+++++.+.+.+++++.|++
T Consensus 36 yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g 115 (475)
T TIGR00924 36 YLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVG 115 (475)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhc
Confidence 35555 89999999999999999999999999999999 8999999999999999999999988888888999999999
Q ss_pred hhhhcchhhhhhhccCCCcc---chhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhc
Q 020792 141 MGLLSYVVPVYIAEITPKNL---RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
.|...+...++++|++|+++ |+++.++.+.+.++|..++|.+++++ +|++.|++.++..++..+..++
T Consensus 116 ~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 116 SGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred cccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764 78899999999999999999888766 8999999877655555444433
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.76 E-value=4.4e-17 Score=146.04 Aligned_cols=148 Identities=16% Similarity=0.195 Sum_probs=108.0
Q ss_pred cchh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH---Hh-----hhhHHH
Q 020792 60 PAQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV---FS-----KAAWWL 130 (321)
Q Consensus 60 ~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~-----~~~~~~ 130 (321)
+.+| ++.+++|++..+.+++.++..++..++++++|+++||+|||+.++.+.+..+++..... +. .....+
T Consensus 23 ~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (396)
T TIGR00882 23 PFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGA 102 (396)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3444 46677999999999999999999999999999999999999999887766655443221 11 123345
Q ss_pred HHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHHHHHHHHHHhh
Q 020792 131 DLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLC 207 (321)
Q Consensus 131 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~~~~~~~~~~~ 207 (321)
.+.+++.|++.+...+....+..|..+ +++...+......++|..++|.+++.+ +|+.+|++.+.+.++..+..+
T Consensus 103 ~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 103 IVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred HHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHH
Confidence 666888888888878877777766533 234455666666677777777777654 899999988887776665554
Q ss_pred cc
Q 020792 208 FI 209 (321)
Q Consensus 208 ~~ 209 (321)
+.
T Consensus 181 ~~ 182 (396)
T TIGR00882 181 FA 182 (396)
T ss_pred Hh
Confidence 43
No 89
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.76 E-value=1.7e-16 Score=142.06 Aligned_cols=149 Identities=13% Similarity=0.190 Sum_probs=110.7
Q ss_pred ccccccCCChhhHHHHHHHHHH-HHHHHHHhHHHhhhhccchHHH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTI-GAMIGAIMSGKIADYIGRRGTM-GFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGM 141 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 141 (321)
++.+++|.+.++.|++.+...+ +..++.+.+++ +||+|||+.+ ..+.+..+++..+.+++++++.+++.+.+.+...
T Consensus 41 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 119 (393)
T PRK15011 41 FLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFG 119 (393)
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4788999999999999776655 55555555565 9999999875 4556666677777888899988776666655555
Q ss_pred hhhcchhhhhhhccCCCccc--hhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccCCh
Q 020792 142 GLLSYVVPVYIAEITPKNLR--GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPESP 213 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 213 (321)
+...+....+..|+.+++.| +...+..+.+..+|..++|.+++.+ |||..|+..++..++..+.. +++||.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 120 STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 56777788888888776655 3455778888888888888888655 99999998887766655544 4567653
No 90
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.76 E-value=3e-17 Score=165.51 Aligned_cols=221 Identities=16% Similarity=0.140 Sum_probs=148.9
Q ss_pred cccccCCCh-hhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHH---HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 020792 65 ITNDLGLSV-AEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGF---SDIVCIIGWVIIVFSKAAWWLDLGRLLVGYG 140 (321)
Q Consensus 65 ~~~~~~~s~-~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 140 (321)
+..+.+.+. ...++..+++.+.++++++++|+++||+|||+++.. ..+..++........++++.++++|+++|++
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~ 121 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIH 121 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 444444433 346888899999999999999999999999997533 2222222223333458999999999999999
Q ss_pred hhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcccCChHHH
Q 020792 141 MGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWL 216 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 216 (321)
.+...++..+++.+++|+++|++++++.+++..+|.+++|.+++++ +|++.|+..++..++.++..+++|+++...
T Consensus 122 ~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (1140)
T PRK06814 122 SALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAA 201 (1140)
T ss_pred HHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999999999999999999999999999999877 899888555555555555556666653100
Q ss_pred HhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHcHH
Q 020792 217 AKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYAS 296 (321)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (321)
++... . . +. .++ ....++.+.+++..+...+..++..+. ...+..+.|
T Consensus 202 --~~~~~--~---------~-~~------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p 249 (1140)
T PRK06814 202 --PDLKI--D---------R-NI------IRS--------TITLLKYAKADKRIWLAILGISWFWLV----GAVVLSQLP 249 (1140)
T ss_pred --CCCee--c---------c-ch------HHH--------HHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHHHhH
Confidence 00000 0 0 00 000 011244455555555544433333332 345666788
Q ss_pred HHHhhc-CCCCchHHHHHHHHH
Q 020792 297 SIFISA-GFSGSIGMIAMVVIQ 317 (321)
Q Consensus 297 ~~~~~~-g~s~~~~~~~~~~~~ 317 (321)
.|+++. |.++...+.+.+...
T Consensus 250 ~~~~~~~g~~~~~~g~~~~~~~ 271 (1140)
T PRK06814 250 LLAKETLGGDENVATLFLAVFS 271 (1140)
T ss_pred HHHHHHcCCchHHHHHHHHHHH
Confidence 888876 888876665555443
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.75 E-value=3.6e-17 Score=149.69 Aligned_cols=172 Identities=15% Similarity=0.148 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHH
Q 020792 35 SAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADY-IGRRGTMGFSDIV 113 (321)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~ 113 (321)
+..+.+++.-....+.++..... ...++.+++|++.++.+++.+.+.....+..+++|+++|| +|||++++++.++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~---l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGI---LAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 44555444444444444433332 3335788899999999999999998888999999999999 9999999999999
Q ss_pred HHHHHHHHHHhhhhHH-HHHHHHHHhhhhhhhcchhhhhhhccCCCcc--chhHHhHHHHHHHHHHHHHHHhhcch----
Q 020792 114 CIIGWVIIVFSKAAWW-LDLGRLLVGYGMGLLSYVVPVYIAEITPKNL--RGGFTTVHQLMICIGVSMTYLIGAFL---- 186 (321)
Q Consensus 114 ~~~~~~~~~~~~~~~~-~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~i~~~~---- 186 (321)
.+++.++++++.+... ++++|+++|++.|...+...++++|.+|+++ |+.+.++++.+.++|..++|.+++++
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~ 170 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF 170 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998876444 5578999999999999999999999998874 47788889999999888887777655
Q ss_pred hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 187 NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 187 ~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
|||+.|++.++..++.++..++.
T Consensus 171 gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 171 GYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHc
Confidence 99999988655444444333333
No 92
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.75 E-value=9e-17 Score=162.37 Aligned_cols=122 Identities=11% Similarity=0.089 Sum_probs=104.8
Q ss_pred cccccCCCh--hhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH---HHhhhhHHHHHHHHHHhh
Q 020792 65 ITNDLGLSV--AEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII---VFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 65 ~~~~~~~s~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~G~ 139 (321)
+..+++.+. ...+++.+++.++++++++++|+++||+|||++++++.++.+++.++. ...++++.++++|++.|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 115 (1146)
T PRK08633 36 LIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGA 115 (1146)
T ss_pred HHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 444555543 447899999999999999999999999999999999887666555443 345788999999999999
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+.+...+...+++.|++|+++|++++++...+..+|.++++.+++++
T Consensus 116 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 116 QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888765
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.75 E-value=3.2e-18 Score=145.38 Aligned_cols=143 Identities=18% Similarity=0.178 Sum_probs=133.9
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Q 020792 67 NDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSY 146 (321)
Q Consensus 67 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 146 (321)
++++-+.++.|++.....+.+.+.+++.|.+.||+|+|..+++|++.+.++++++++..+++.++++|.++|+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 34566778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCcc-chhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 147 VVPVYIAEITPKNL-RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 147 ~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
+..++++|.||.++ |++++|+...+..+|..++|.+++.+ |.+.+|++.+++.++...+.+++
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 99999999999765 69999999999999999999999887 89999999999999888877665
No 94
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.73 E-value=2.8e-16 Score=141.93 Aligned_cols=145 Identities=18% Similarity=0.171 Sum_probs=97.3
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH---Hhhh-----hHHHHHHHH
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV---FSKA-----AWWLDLGRL 135 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~ 135 (321)
++.+++|++..+.|++.++..++..++++++|+++||+|||++++++..+.+++..... ..+. .....+.++
T Consensus 36 ~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (420)
T PRK09528 36 WLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGI 115 (420)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777999999999999999999999999999999999999999887666554433211 1111 111222233
Q ss_pred HHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHHHHHHHHHHhhccc
Q 020792 136 LVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLCFIP 210 (321)
Q Consensus 136 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~~~~~~~~~~~~~~ 210 (321)
+.|.+.....+....+..+ . .++++...+.......+|..++|.+++.+ +|+++|++.+++.++.++..++++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 116 YLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhccc
Confidence 3333332222333333222 2 23457777887787888888888887766 899999988877776666655543
No 95
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.67 E-value=2.8e-15 Score=135.75 Aligned_cols=143 Identities=18% Similarity=0.225 Sum_probs=115.8
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI-GRRGTMGFSDIVCIIGWVIIVFSK-AAWWLDLGRLLVGYGM 141 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~ 141 (321)
++.+++|+++.+.+.+.+.+.+...++.+++|+++||+ |||++++++.++.+++.++.+..+ +...+.+...+.+++.
T Consensus 35 yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~ 114 (493)
T PRK15462 35 YLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGY 114 (493)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhc
Confidence 46677999999999999999999999999999999999 999999999999999887766543 2233444444455666
Q ss_pred hhhcchhhhhhhccCCCc--cchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh
Q 020792 142 GLLSYVVPVYIAEITPKN--LRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~ 206 (321)
|...+...++++|.+|++ +|..+.++.+.+.++|+.++|.+.+++ ||++.|.+.++..++.++..
T Consensus 115 G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 115 GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 666777789999999976 688899999999999999999998876 89999988766555544443
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.67 E-value=3.5e-15 Score=137.28 Aligned_cols=142 Identities=20% Similarity=0.285 Sum_probs=118.1
Q ss_pred hccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHhhh
Q 020792 63 SGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADY-IGRRGTMGFSDIVCIIGWVIIVFSK-AAWWLDLGRLLVGYG 140 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~ 140 (321)
.++.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++..++++++ +.+.+.+++++.|++
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 35778999999999888888776666667899999999 5999999999999999988888864 456677889999999
Q ss_pred hhhhcchhhhhhhccCCCcc--chhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHH
Q 020792 141 MGLLSYVVPVYIAEITPKNL--RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI 204 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~ 204 (321)
.|...+...+++.|++|+++ |+.+.++++.+.++|..++|.+++++ |||+.|++.++..++.++
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVV 195 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 99888888899999998654 35678888999999999999888776 899999987765454443
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.66 E-value=3e-15 Score=135.06 Aligned_cols=175 Identities=17% Similarity=0.206 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh----hccchHHHHHH
Q 020792 35 SAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD----YIGRRGTMGFS 110 (321)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~~l~~~ 110 (321)
++++.+........+.+.... +..+.+.+++|.+..+.+++..+..+...+.+|+.|+++| |+|||++++++
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~----~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~ 79 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQL----SLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAA 79 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHH
Confidence 344444344334445444443 3344456789999999999999999999999999999999 59999998775
Q ss_pred -HHHHHHHHHHHHHhhhhH-----------------HHHHHHHHHhhhhhhhcchhhhhhhccCCCccc--hhHHhHHHH
Q 020792 111 -DIVCIIGWVIIVFSKAAW-----------------WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR--GGFTTVHQL 170 (321)
Q Consensus 111 -~~~~~~~~~~~~~~~~~~-----------------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~ 170 (321)
.+..+++..+.+++++.. ..+++..+..++.....+...++++|..|+++| +.+.++.+.
T Consensus 80 g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 80 GAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred HHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 666666667777665532 223333344557777788889999999998876 578999999
Q ss_pred HHHHHHHHHHHhhcch-------------------hhHHHHHHhHHHHHHHHHHh-hcccCCh
Q 020792 171 MICIGVSMTYLIGAFL-------------------NWRILALIGTIPCLVQLIGL-CFIPESP 213 (321)
Q Consensus 171 ~~~~g~~~~~~i~~~~-------------------~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 213 (321)
..++|.++++.+++.. +.+..|++.+++.++..+.. ++.+|.|
T Consensus 160 ~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 160 FMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 9999999988877543 45677888777766665554 5578864
No 98
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.64 E-value=1.6e-14 Score=129.28 Aligned_cols=147 Identities=16% Similarity=0.169 Sum_probs=120.0
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 143 (321)
++++++|++..+.+++.+...++..++.++.|+++||+|||+.+..+.+..++........++.+.+++.+++.+++.|.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 46678899999999988888888889999999999999999988877766665555555567777778888888888777
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcccC
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPE 211 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e 211 (321)
..+....+..|.+|+ +|+++.++++....+|..++|.+++.+ +|+..+++.+++.++.++..+++||
T Consensus 322 ~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 777778888999986 489999998888888888888877765 8999998888888877777776664
No 99
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.64 E-value=1.6e-14 Score=129.26 Aligned_cols=236 Identities=12% Similarity=-0.012 Sum_probs=153.1
Q ss_pred HHHHHHHHHHhhcccccccchhccccccCCChhhHHHH--HHHHHHHHHHHHHhH-HHhhhhccchHHHHHHHHHH-HHH
Q 020792 42 FVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLF--GSILTIGAMIGAIMS-GKIADYIGRRGTMGFSDIVC-IIG 117 (321)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~i~~~~~-g~l~dr~Grr~~l~~~~~~~-~~~ 117 (321)
..+...++..+...+...+.+|.+.++.|.+.++.|++ .+...+...+.+|++ ++.+||+|||+..++.+.+. +++
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~ 83 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSAC 83 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHH
Confidence 33444556667777777889999999999999999997 466688888888888 55799999999875555332 222
Q ss_pred HHHHH---Hhhh-hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh----cchhhH
Q 020792 118 WVIIV---FSKA-AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG----AFLNWR 189 (321)
Q Consensus 118 ~~~~~---~~~~-~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~----~~~~w~ 189 (321)
....+ ...+ ...++...++.++..+...+..-++..|..++++++...+....+..+|..+++... ...+||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~ 163 (390)
T TIGR02718 84 LASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQR 163 (390)
T ss_pred HHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 22222 1222 333444455566666777777788888998888888888888888888888887544 445999
Q ss_pred HHHHHhHHHHHHHHHHhhcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhh
Q 020792 190 ILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKY 269 (321)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (321)
..|++.+++.++..+..++++|+++. +.+ . ++ .+..++++.+|++.
T Consensus 164 ~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~----------------~-~~--------------~~~~~~~~~l~~~~ 209 (390)
T TIGR02718 164 PAFLLVACVPLASLVCVLWLKDRAVA---SPE----------------A-PL--------------ARRASLFRFFRRPL 209 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcC---ccc----------------c-ch--------------hhHHHHHHHHcCcC
Confidence 99999988877766665555443210 000 0 00 00112456677665
Q ss_pred hhHHHHHHHHHHHHHhhChhhHHHcHHHHHhhcCCCCchHHHHHHH
Q 020792 270 AHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVV 315 (321)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 315 (321)
.+......++.... ......+.+.++++.|++++..+.+.++
T Consensus 210 ~~~~~~~~~l~~~~----~~~~~~~~~~~l~~~G~s~~~ig~~~~~ 251 (390)
T TIGR02718 210 AWSLLALALLSAMT----AVSGFGLSKLYLVDAGWPLEWIGRLGMA 251 (390)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHhhHHHHhcCCCHHHHHHHHhH
Confidence 55444433333322 3344456677888889998876666544
No 100
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.63 E-value=2.5e-15 Score=113.91 Aligned_cols=132 Identities=25% Similarity=0.365 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCc
Q 020792 80 GSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 159 (321)
Q Consensus 80 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 159 (321)
.+...++..++.++.|++.||+|||+.+..+.....++.++....++.+.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788899999999999999999999999999999888888899999999999999999999999999999999999
Q ss_pred cchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhc-ccC
Q 020792 160 LRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF-IPE 211 (321)
Q Consensus 160 ~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~-~~e 211 (321)
+|++..+..+....+|..++|.+.+.+ +|++.+++.+.+.++..+..++ .||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999988888766 7999988887776666655543 444
No 101
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.62 E-value=7.2e-15 Score=139.18 Aligned_cols=138 Identities=15% Similarity=0.075 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhcc
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEI 155 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 155 (321)
..+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++.+++.|++.++.++...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35557778899999999999999999999999999999999999988888888888888888988888899999999999
Q ss_pred CCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHHHHHHHHHHhhcccCCh
Q 020792 156 TPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLCFIPESP 213 (321)
Q Consensus 156 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~~~~~~~~~~~~~~e~~ 213 (321)
+|+++|++++++.+....+|.+++|++++.+ +...+|++.+++.+++.++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999998765 445677777777777777777789873
No 102
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.61 E-value=5.6e-17 Score=148.91 Aligned_cols=261 Identities=19% Similarity=0.262 Sum_probs=3.0
Q ss_pred hhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH--------
Q 020792 52 GSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF-------- 123 (321)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-------- 123 (321)
....++....++.++++|+++.++.|++.+.+-++..+..++..++.+|..|-+.+-+|.++.+++++++++
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y 95 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPY 95 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCC
Confidence 455566677788899999999999999999999999999999999999999999999999999999988764
Q ss_pred ------------------h------------------------hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccc
Q 020792 124 ------------------S------------------------KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 161 (321)
Q Consensus 124 ------------------~------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r 161 (321)
. .-++.++++.++.|+|..+.+++..+|+-|..++++-
T Consensus 96 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~s 175 (539)
T PF03137_consen 96 SYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNS 175 (539)
T ss_dssp --------------------------------------------------------SSS---------------------
T ss_pred ccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccC
Confidence 0 0035677889999999999999999999999999988
Q ss_pred hhHHhHHHHHHHHHHHHHHHhhcch--------------------------hhHHHHHHhHHHHHHHHHHhhcccCC-hH
Q 020792 162 GGFTTVHQLMICIGVSMTYLIGAFL--------------------------NWRILALIGTIPCLVQLIGLCFIPES-PR 214 (321)
Q Consensus 162 ~~~~~~~~~~~~~g~~~~~~i~~~~--------------------------~w~~~~~~~~~~~~~~~~~~~~~~e~-~~ 214 (321)
+...|+.+....+|.++|.++++.. .|+.-|++.+.+.++..+..+++|++ |+
T Consensus 176 plYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 176 PLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 9999999999999998888877543 25556666677767666666777765 32
Q ss_pred HHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhHHHc
Q 020792 215 WLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFY 294 (321)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (321)
. . +..++.+. ++.+.++ ...++.++ +...+.......++...+++....+.++...+..........++..|
T Consensus 256 ~-~--~~~~~~~~--~~~~~~~-~~~~~~~~--~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF 327 (539)
T PF03137_consen 256 T-S--ERQEEKES--SERKEED-SDKDSFKD--PKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATF 327 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-c--cccchhhh--hhcchhh-hhhhcccc--cccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 0 00000000 0000000 00000000 00000000111222223333444556666666666777778899999
Q ss_pred HHHHHhhc-CCCCchHHHHHHHHHHhc
Q 020792 295 ASSIFISA-GFSGSIGMIAMVVIQVID 320 (321)
Q Consensus 295 ~~~~~~~~-g~s~~~~~~~~~~~~i~g 320 (321)
.|-|++.. +.+++.+.++.|+..+++
T Consensus 328 ~pKylE~QF~~sas~A~~l~G~v~ip~ 354 (539)
T PF03137_consen 328 LPKYLESQFGLSASQASLLTGIVSIPG 354 (539)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHhCCCHHHHHHHHhhhhcch
Confidence 99999987 999999999988887765
No 103
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=4.8e-14 Score=127.14 Aligned_cols=152 Identities=13% Similarity=-0.036 Sum_probs=104.0
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccc-hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGR-RGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLV 137 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 137 (321)
.+..+++.+++|++..+.|++.+...++..++++++|+++||+|| |+++.++.++..++..+..+.++++.+.+.|++.
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN 102 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 344556888899999999999999999999999999999999965 7788888888888888888888999999999999
Q ss_pred hhhhhhhcchhhhhh----h----ccCCCccchhHHhHHHHHHHHHHHHHHHhhcchhhHHHHHHhHHHHHHHHHHhhcc
Q 020792 138 GYGMGLLSYVVPVYI----A----EITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 138 G~~~~~~~~~~~~~~----~----~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
|++.+...+...+.. . |......|.+..|. .+..+|+.+++.+.....|+ +|++.++..++..+..+++
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~--lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~~ 179 (418)
T TIGR00889 103 SLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT--IGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALTL 179 (418)
T ss_pred HHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh--HHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhcC
Confidence 998766655544432 1 22222223344332 33444444443332111243 4555555555555555667
Q ss_pred cCCh
Q 020792 210 PESP 213 (321)
Q Consensus 210 ~e~~ 213 (321)
||+|
T Consensus 180 ~e~~ 183 (418)
T TIGR00889 180 PDIP 183 (418)
T ss_pred CCCC
Confidence 8764
No 104
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.60 E-value=1.6e-14 Score=131.06 Aligned_cols=152 Identities=20% Similarity=0.152 Sum_probs=116.2
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhh----ccchH-HHHHHHHHHHHHHHHHHHhhh------hHH
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADY----IGRRG-TMGFSDIVCIIGWVIIVFSKA------AWW 129 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~ 129 (321)
..+++.+++|+++.+.|++.++..+..++..|+.|+++|| +|||| .++++....+++.+++...++ .+.
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3445778899999999999999999999999999999997 67754 677787888877777766543 355
Q ss_pred HHHHHHHHhhhhhhhcchhhhhhhccC-CCccchhHHhHHHHHHHHHHHHHHHhh----c-------chhhHHHHHHhHH
Q 020792 130 LDLGRLLVGYGMGLLSYVVPVYIAEIT-PKNLRGGFTTVHQLMICIGVSMTYLIG----A-------FLNWRILALIGTI 197 (321)
Q Consensus 130 ~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~----~-------~~~w~~~~~~~~~ 197 (321)
+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+. . ..+||+.+.+.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~ 181 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLAL 181 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHH
Confidence 667778888888877777788889987 468899999988887777765443322 1 2379999988888
Q ss_pred HHHHHHHHh-hcccCC
Q 020792 198 PCLVQLIGL-CFIPES 212 (321)
Q Consensus 198 ~~~~~~~~~-~~~~e~ 212 (321)
+.++..+.. ++.||+
T Consensus 182 l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 182 IGVVSLIICFFGTKER 197 (437)
T ss_pred HHHHHHHHHHcCCEec
Confidence 777665554 456665
No 105
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.59 E-value=1.7e-13 Score=125.73 Aligned_cols=171 Identities=16% Similarity=0.265 Sum_probs=132.3
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHH
Q 020792 32 SATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSD 111 (321)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 111 (321)
+..+..|..-.+..++..+......+ +..+..-|+...+++..+..+-..+.++++|.++||+.||++++.+.
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~w-------lv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~ 82 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAW-------LVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ 82 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Confidence 34456666666666666666444332 33344558889999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHH-----hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 112 IVCIIGWVIIVF-----SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 112 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
++.++...+.++ ..+.+.+++.-++.|++.+...|...+++.|..|+++...++++.....++..++||.+++.+
T Consensus 83 ~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~L 162 (524)
T PF05977_consen 83 LLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGIL 162 (524)
T ss_pred HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 877665544333 246788889999999999999999999999999999999999999999999888888888775
Q ss_pred ----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 187 ----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 187 ----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
|-.+.|.+.++.-++..+....+
T Consensus 163 va~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 163 VAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66677777665544444333333
No 106
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.58 E-value=1.1e-14 Score=134.36 Aligned_cols=266 Identities=17% Similarity=0.222 Sum_probs=193.3
Q ss_pred HHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 020792 42 FVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII 121 (321)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 121 (321)
.+..+..+..+...+++...+..+++.|+++.++.|++.+.+-++..+...+..++.-|..|-+.+-+|+++++++++++
T Consensus 100 ~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~ 179 (735)
T KOG3626|consen 100 VLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLF 179 (735)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHH
Confidence 33444455555555777778888999999999999999999999999999999999999999999999999999999988
Q ss_pred HHh--------------------h---------------------------h----hH-HHHHHHHHHhhhhhhhcchhh
Q 020792 122 VFS--------------------K---------------------------A----AW-WLDLGRLLVGYGMGLLSYVVP 149 (321)
Q Consensus 122 ~~~--------------------~---------------------------~----~~-~~~~~~~l~G~~~~~~~~~~~ 149 (321)
++- + . .+ .++++.++.|+|..+.++...
T Consensus 180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGi 259 (735)
T KOG3626|consen 180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGI 259 (735)
T ss_pred hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCC
Confidence 740 0 0 22 567778999999999999999
Q ss_pred hhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----------------------hhHHHHHHhHHHHHHHHHHh
Q 020792 150 VYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----------------------NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 150 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----------------------~w~~~~~~~~~~~~~~~~~~ 206 (321)
+|+-|...+++-....++.+....+|.++|.+++++. .|+.-|++.+.+.++..+..
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~ 339 (735)
T KOG3626|consen 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL 339 (735)
T ss_pred ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999889999999999999999998888653 37777888888888888888
Q ss_pred hcccCChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhh
Q 020792 207 CFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFG 286 (321)
Q Consensus 207 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (321)
+++|.+.+.. +++ ...++.+..+.+.+.+ +.+....++-.++...+++....++++...+.......
T Consensus 340 f~fPk~lp~~---~~~----~~~~~~~~~k~~~~~~------~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~ 406 (735)
T KOG3626|consen 340 FFFPKELPKS---QKR----KRARDLHVLKTESGGA------KSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESL 406 (735)
T ss_pred HhCcccCccc---ccc----chhhhhcccccccccc------cCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 8888763211 100 0000000000000000 00000000001122223333445566667777777777
Q ss_pred ChhhHHHcHHHHHhhc-CCCCchHHHHHHHHHHhc
Q 020792 287 GVNGIAFYASSIFISA-GFSGSIGMIAMVVIQVID 320 (321)
Q Consensus 287 ~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~i~g 320 (321)
.+.+...|+|-|++.. |.+++.+...+|..++++
T Consensus 407 ~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~ 441 (735)
T KOG3626|consen 407 AITGYITFLPKYLETQFGISASLANILTGSIGVPA 441 (735)
T ss_pred HHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhh
Confidence 7889999999999987 999999999999888875
No 107
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.58 E-value=2.8e-14 Score=126.51 Aligned_cols=141 Identities=19% Similarity=0.122 Sum_probs=118.6
Q ss_pred hccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHhhh
Q 020792 63 SGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAA--WWLDLGRLLVGYG 140 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~ 140 (321)
+.+.+++|.+..+.+.+.+...++..++.++.|+++||+|||+.+.++.++.+++.++..+.++. ..+.+..++.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 308 (377)
T TIGR00890 229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFT 308 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHH
Confidence 33456788898899999999999999999999999999999999999988888888777766533 3344567788888
Q ss_pred hhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHH
Q 020792 141 MGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQL 203 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~ 203 (321)
.+...+..+.++.|.+|+++|+++.++.+....+|..++|.+.+.+ ||++.|.+.+++.++++
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 309 WGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 8888888889999999999999999999999999999999887665 89998888777666543
No 108
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=9.7e-15 Score=131.90 Aligned_cols=145 Identities=13% Similarity=0.077 Sum_probs=120.6
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcch
Q 020792 68 DLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYV 147 (321)
Q Consensus 68 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 147 (321)
+.+.+..+.|++.++..++..++.+++|+++||+|||+.+.++.++.+++.++.++.++.+.+.+.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34667778899999999999999999999999999999999999998888888888889998889999999988887777
Q ss_pred hhhhhhccCCCccchhHHhH-HHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhh-cccCC
Q 020792 148 VPVYIAEITPKNLRGGFTTV-HQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLC-FIPES 212 (321)
Q Consensus 148 ~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~-~~~e~ 212 (321)
...++.|.+|++.|++..+. ++.+..+|..++|.+.+++ ||+..|.+.+++.++..++.+ .++++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88899999999988877655 5667778888888877765 899999988877766555544 34443
No 109
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.57 E-value=1.6e-13 Score=121.92 Aligned_cols=147 Identities=18% Similarity=0.242 Sum_probs=121.5
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 143 (321)
++.+++|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..++.....+.++.+.+.+.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677899999999988888888888899999999999999999888777666666666677888888888999998888
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcccC
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPE 211 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e 211 (321)
..+....++.|..|++ |+++.++++....+|..++|.+.+.+ +|+..|++.+++.++..+..++++|
T Consensus 305 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 8888888999998764 67999999988889998888887765 7999999888887777776665543
No 110
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.57 E-value=3.4e-14 Score=127.76 Aligned_cols=149 Identities=14% Similarity=0.072 Sum_probs=122.5
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYG 140 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 140 (321)
..|.+.++.|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+.+..+++..+..+.++.+.+.+..++.|++
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 34556667899999999999999999999999999999999999999887777777777667777777777778888988
Q ss_pred hhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 141 MGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
.+...+...+++.|.+|+++|++..++.+....+|..++|.+.+.+ +|...++......++..+..+++
T Consensus 322 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 322 VVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8788888899999999999999999999999999999999998876 45555655555555555444444
No 111
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=2e-13 Score=119.66 Aligned_cols=151 Identities=23% Similarity=0.388 Sum_probs=133.6
Q ss_pred ccchhccccc-cCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 59 SPAQSGITND-LGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRG-TMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 59 ~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
....|.+.++ +|.+..+.++..+...++..++.++.+++.||+|||+ .+..+.++..++.++....++.+.+.+..++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (352)
T cd06174 195 LTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLL 274 (352)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3344444444 5899999999999999999999999999999999999 9999999999999999988888889999999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
.|++.+...+....++.|..|+++|++..+..+....+|..+++.+.+.+ +|+..+++.+++.++..+..+++
T Consensus 275 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 275 LGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHheec
Confidence 99999999999999999999999999999999999999999999888765 89999999888888777665443
No 112
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.53 E-value=4.2e-13 Score=120.40 Aligned_cols=144 Identities=15% Similarity=0.266 Sum_probs=119.5
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Q 020792 67 NDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSY 146 (321)
Q Consensus 67 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 146 (321)
++.|. ++.++..+.+.++..++.++.|++.||+|||+.+..+.++.+++..+..+.++.+.+++..++.|++.+..++
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 244 AARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred HHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHH
Confidence 34455 3456677888899999999999999999999999998888888888888888888888889999999988888
Q ss_pred hhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcccCC
Q 020792 147 VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPES 212 (321)
Q Consensus 147 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e~ 212 (321)
.....+.|..|+++|+++.++++....+|..+++.+.+.+ ||+..+++.+++.++.++..++++++
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8888888999999999999999999988888777776655 89999998888877777666555443
No 113
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.53 E-value=6.8e-13 Score=118.04 Aligned_cols=151 Identities=17% Similarity=0.232 Sum_probs=121.9
Q ss_pred hhcccc-ccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccc-hHHHHHHHHHHHHHHHHH-HH---hh-hhHHHHHHH
Q 020792 62 QSGITN-DLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGR-RGTMGFSDIVCIIGWVII-VF---SK-AAWWLDLGR 134 (321)
Q Consensus 62 ~~~~~~-~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~-~~---~~-~~~~~~~~~ 134 (321)
-|++++ |.+.+.+..|++.++..++.+++++.+|+.+.|.+. |+.++.+.++.++++++. ++ .+ ..+.++++|
T Consensus 58 wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R 137 (488)
T KOG2325|consen 58 WPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVAR 137 (488)
T ss_pred chhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 444554 577788889999999999999999999999999996 888899999999998877 33 23 568899999
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----------------hhHHHHHHhHH
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----------------NWRILALIGTI 197 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----------------~w~~~~~~~~~ 197 (321)
++.|+|.|. ....-.|+++-...++|.++.+....+..+|..+||.++..+ -+..+-|+.++
T Consensus 138 ~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i 216 (488)
T KOG2325|consen 138 ILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAI 216 (488)
T ss_pred HHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHH
Confidence 999999764 677889999988888999999999998888888888877554 13356777777
Q ss_pred HHHHHHHHh-hcccCCh
Q 020792 198 PCLVQLIGL-CFIPESP 213 (321)
Q Consensus 198 ~~~~~~~~~-~~~~e~~ 213 (321)
+.++..+.. ++++|.+
T Consensus 217 ~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 217 LWIIYIVIILFFFKEVY 233 (488)
T ss_pred HHHHHHHHHHhheeecc
Confidence 777766655 4566664
No 114
>PRK03699 putative transporter; Provisional
Probab=99.53 E-value=4.1e-13 Score=120.32 Aligned_cols=147 Identities=11% Similarity=0.063 Sum_probs=119.2
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 143 (321)
++++++|++..+.+.+.+.+.++..++.++.|+++||+|||+++.....+.++...+....++.+.+.+..++.|++.+.
T Consensus 231 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 310 (394)
T PRK03699 231 YAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSA 310 (394)
T ss_pred HHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 35577899999999999999999999999999999999999999888877777766666677777777778888988888
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcccC
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPE 211 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e 211 (321)
.++...++..|..|. +++...+.......+|..++|.+.+.+ ||+..++..+++.++..+..+.+++
T Consensus 311 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 311 IYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 888888888887764 467777888888888998888887766 8888888877777766665555443
No 115
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.52 E-value=1.6e-13 Score=123.74 Aligned_cols=140 Identities=13% Similarity=0.210 Sum_probs=116.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHhhhhhhhcchh
Q 020792 73 VAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK----AAWWLDLGRLLVGYGMGLLSYVV 148 (321)
Q Consensus 73 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~~~~~~~~ 148 (321)
.++.+...++..++..++.++.|+++||+|||+++.++.++.+++..+..... +.+.+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 46679999999999999999999999999999999999999888876666532 24567778999999998888888
Q ss_pred hhhhhccCCCccchhHHhHHH-HHHHHHHHHHHHhhcch----------hhHHHHHHhHHHHHHHHHHh-hcccCC
Q 020792 149 PVYIAEITPKNLRGGFTTVHQ-LMICIGVSMTYLIGAFL----------NWRILALIGTIPCLVQLIGL-CFIPES 212 (321)
Q Consensus 149 ~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~~----------~w~~~~~~~~~~~~~~~~~~-~~~~e~ 212 (321)
..++.|++|+++|+++.++.+ ....+|..++|.+++.+ ||+..|.+.+++.++..+.. ++++|+
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999997 56788888888888654 38999988887766665554 556766
No 116
>PRK09952 shikimate transporter; Provisional
Probab=99.52 E-value=3.7e-13 Score=122.24 Aligned_cols=149 Identities=17% Similarity=0.208 Sum_probs=111.9
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH---h-hhhHHHHHHHHHHhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF---S-KAAWWLDLGRLLVGY 139 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~G~ 139 (321)
++.+++|.+......+.....+...++.+++|+++||+|||+++..+.++.+++...... . ++.+.+++..++.++
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 466778888877666666677778889999999999999999988887766555443322 2 233444455666788
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHH-HHHHHHHHHHHHhhcch------hhHHHHHHhHHHHHHHHHHhhcccCC
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQ-LMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFIPES 212 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~~------~w~~~~~~~~~~~~~~~~~~~~~~e~ 212 (321)
+.+...+..++++.|.+|++.|+.+.++.+ .+..+|+.++|.+.+++ +|+.++.+.+++.++..+..+.++|+
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 888878888999999999999988888854 44557888888887765 47888888888888777776666664
No 117
>PRK12382 putative transporter; Provisional
Probab=99.49 E-value=1.1e-12 Score=117.31 Aligned_cols=141 Identities=17% Similarity=0.200 Sum_probs=118.6
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 144 (321)
+.++.|.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+.+..++.|++.+..
T Consensus 242 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 319 (392)
T PRK12382 242 YFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLI 319 (392)
T ss_pred HHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhH
Confidence 33445554 3456667788888999999999999999999999998888888888878888888888899999998888
Q ss_pred cchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhh
Q 020792 145 SYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLC 207 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~ 207 (321)
++.....+.|.+|+++|+++.++.+....+|..++|.+.+.+ ||+..|.+.+++.++..+..+
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 320 FPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999988888765 899999988887777666554
No 118
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.48 E-value=9e-13 Score=120.74 Aligned_cols=150 Identities=13% Similarity=0.158 Sum_probs=108.8
Q ss_pred cchh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHH
Q 020792 60 PAQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWV--IIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 60 ~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 136 (321)
...| ++++++|++..+.++..++..++..++.+++|+++||+|||+.+.....+..++.. .....++.+...+.+++
T Consensus 279 ~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (467)
T PRK09556 279 NWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFA 358 (467)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3344 56778999999999999999999999999999999999999877665444443332 22233456666677888
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHH-HHHHHHHhhcch----------------hhHHHHHHhHHHH
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICI-GVSMTYLIGAFL----------------NWRILALIGTIPC 199 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~~----------------~w~~~~~~~~~~~ 199 (321)
.|++.............|.+|++.||++.++.+....+ |..++|.+.+++ +|+..|++.++..
T Consensus 359 ~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~ 438 (467)
T PRK09556 359 LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAA 438 (467)
T ss_pred HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHH
Confidence 88654333333446777999999999999999888775 656665554332 5899998887777
Q ss_pred HHHHHHhhcc
Q 020792 200 LVQLIGLCFI 209 (321)
Q Consensus 200 ~~~~~~~~~~ 209 (321)
+++.+..+++
T Consensus 439 ~~~~~~~~~~ 448 (467)
T PRK09556 439 IGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHH
Confidence 7766655443
No 119
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.48 E-value=2.2e-12 Score=118.54 Aligned_cols=154 Identities=17% Similarity=0.075 Sum_probs=111.9
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh--hh-H-HHHHHH
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK--AA-W-WLDLGR 134 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~ 134 (321)
..+.|.+.++.|.+.....+......++..++.++.|+++||+|||++++.+.++.+++.++.+... +. + ....+.
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 370 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSM 370 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 3455677788898888777888888889999999999999999999999999999888877765431 21 1 222233
Q ss_pred HHHhhhhhh-hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhc----------chhhHHHHHHhHHHHHHHH
Q 020792 135 LLVGYGMGL-LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGA----------FLNWRILALIGTIPCLVQL 203 (321)
Q Consensus 135 ~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~----------~~~w~~~~~~~~~~~~~~~ 203 (321)
++.+++.+. ..+....++.|.+|+++|+++.++.+....+|..+++.+.. ..+|++.|++.+++.++..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (479)
T PRK10077 371 LFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAA 450 (479)
T ss_pred HHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHH
Confidence 334444333 23667899999999999999999998888888776643332 2367778888777666665
Q ss_pred HHh-hcccCC
Q 020792 204 IGL-CFIPES 212 (321)
Q Consensus 204 ~~~-~~~~e~ 212 (321)
+.. ++.||+
T Consensus 451 ~~~~~~~~e~ 460 (479)
T PRK10077 451 LFMWKFVPET 460 (479)
T ss_pred HHHHhccccC
Confidence 554 345776
No 120
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.48 E-value=1.5e-12 Score=116.21 Aligned_cols=140 Identities=17% Similarity=0.135 Sum_probs=120.9
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 144 (321)
..+++|.+..+.|.+.++..++..++.++.+++.||+|+|+.+.++.++..+...+.++.++.+.+++..++.|+..+..
T Consensus 231 ~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~ 310 (382)
T TIGR00902 231 YWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVC 310 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHH
Confidence 33568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhccCCCccchhHHhHHH-HHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh
Q 020792 145 SYVVPVYIAEITPKNLRGGFTTVHQ-LMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~ 206 (321)
.+....++.+. |+++|++..++++ ....+|..+++.+++++ ++ ..|+..+.+.++.++..
T Consensus 311 ~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 311 HLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 99999999998 8888999999886 46778888888888776 54 45666666666555443
No 121
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.47 E-value=4.1e-13 Score=119.74 Aligned_cols=136 Identities=21% Similarity=0.192 Sum_probs=105.4
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHH--HHHHH--hhhhHHHHHHHHHHhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGW--VIIVF--SKAAWWLDLGRLLVGYG 140 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~l~G~~ 140 (321)
+++++|.+..+.+...+...++..++.++.|+++||+|||+.+..+..+..+.. .+..+ .++.+.+.+..++.|++
T Consensus 246 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 325 (394)
T TIGR00883 246 LTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALI 325 (394)
T ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 457789999999999999999999999999999999999998776554444333 22222 24566677778888988
Q ss_pred hhhhcchhhhhhhccCCCccchhHHhH-HHHHHHHHHHHHHHhhcch----h-hHHHHHHhHHHHH
Q 020792 141 MGLLSYVVPVYIAEITPKNLRGGFTTV-HQLMICIGVSMTYLIGAFL----N-WRILALIGTIPCL 200 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~i~~~~----~-w~~~~~~~~~~~~ 200 (321)
.+...+...+++.|.+|+++|+++.++ ++.+..+|..++|.+++.+ + |+..++......+
T Consensus 326 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 326 GGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 888899999999999999999998887 4556667887888887765 5 7777666555443
No 122
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.47 E-value=5e-12 Score=109.89 Aligned_cols=155 Identities=14% Similarity=0.073 Sum_probs=125.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHH
Q 020792 31 ASATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFS 110 (321)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~ 110 (321)
.+..+++|..++...+..+..+....-+++...+....+| +.+..-|+..++.+.+....+++-|+.||+|-|..++++
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 3566788888888888888777776666666666777788 777888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh------hhhH--HHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHh
Q 020792 111 DIVCIIGWVIIVFS------KAAW--WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLI 182 (321)
Q Consensus 111 ~~~~~~~~~~~~~~------~~~~--~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 182 (321)
.++.+++..+-..+ +.++ ....+..+.+.++-.....-.-+..-|||+++|..+..+..++..+|..++.++
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 99999999877664 2334 566778888888766666556677779999999999999888888888887777
Q ss_pred hcch
Q 020792 183 GAFL 186 (321)
Q Consensus 183 ~~~~ 186 (321)
...+
T Consensus 196 ppil 199 (480)
T KOG2563|consen 196 PPIL 199 (480)
T ss_pred ccee
Confidence 6554
No 123
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.46 E-value=6.3e-12 Score=112.01 Aligned_cols=222 Identities=16% Similarity=0.218 Sum_probs=138.1
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhcc-chHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIG-RRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLV 137 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 137 (321)
.|+.+...++.|+|..|+|.+.++..+..+++++++|+++||.+ +|+.+.+..++.++........++++.+++..++.
T Consensus 22 ~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~ 101 (400)
T PF03825_consen 22 LPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLF 101 (400)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 45566677778999999999999999999999999999999986 66777777777777777777788888888888888
Q ss_pred hhhhhhhcchhhhhhhccCCCccc--hhHHhHHHHHHHHHHHH-HHHhhcchhh---HHHHHHhHHHHHHHHHHhhcccC
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLR--GGFTTVHQLMICIGVSM-TYLIGAFLNW---RILALIGTIPCLVQLIGLCFIPE 211 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~-~~~i~~~~~w---~~~~~~~~~~~~~~~~~~~~~~e 211 (321)
.+...+..+...++..+....+.+ |+.=.+-..++.+++.. +..+.+..++ ...+++.++..++.....+.+|+
T Consensus 102 ~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~ 181 (400)
T PF03825_consen 102 SFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPK 181 (400)
T ss_pred HHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888888888888777753211 33333333333333221 2233333322 23455555555444444566777
Q ss_pred ChHHHHhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhcccccchhhhhhhhhhhHHHHHHHHHHHHHhhChhhH
Q 020792 212 SPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGI 291 (321)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (321)
.|+. +..++ +.++....+..+++|+|.....++..++... .....
T Consensus 182 ~~~~---~~~~~----------------------------~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~----~~~~~ 226 (400)
T PF03825_consen 182 TPPK---RSAKE----------------------------SVKKLLGLDALKLLKNPRFLVFLLAAFLIGI----SHAAY 226 (400)
T ss_pred Cccc---cccCC----------------------------CcccccchHHHHHhcCccHHHHHHHHHHHHH----HHHHH
Confidence 6521 00000 0000111123457777655443333333322 34567
Q ss_pred HHcHHHHHhhcC-CCCchHHHHHHH
Q 020792 292 AFYASSIFISAG-FSGSIGMIAMVV 315 (321)
Q Consensus 292 ~~~~~~~~~~~g-~s~~~~~~~~~~ 315 (321)
..|.+.|+++.| .+....+.+.++
T Consensus 227 ~~f~~~yl~~~gg~~~~~~g~~~~l 251 (400)
T PF03825_consen 227 YTFFSIYLQELGGYSGSTIGILWAL 251 (400)
T ss_pred HHHHHHHHHHcccchhhHHHHHHHH
Confidence 788888999986 666655554444
No 124
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.46 E-value=5e-13 Score=121.88 Aligned_cols=144 Identities=11% Similarity=0.081 Sum_probs=116.6
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc--cchHHHHH--HHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI--GRRGTMGF--SDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
.+|.+.+++|.+..+.+++.++..++..+++++.|+++||. ++|+...+ +.+..+++.++....++++.+++.+++
T Consensus 263 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~ 342 (455)
T TIGR00892 263 FLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIF 342 (455)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 34445566899999999999999999999999999999973 34443333 333344445556667888888889999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHH
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLI 204 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~ 204 (321)
.|++.+...+...+++.|.+|++++++..++++....+|..++|.+.+.+ +|++.|++.+++.++..+
T Consensus 343 ~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 343 FGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999988899999999999999999999999999999999999998865 588888888877665544
No 125
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.46 E-value=1.1e-12 Score=116.76 Aligned_cols=142 Identities=17% Similarity=0.200 Sum_probs=103.2
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchH--HHHH------HHHHHHHHHHHHHHhhhhHHHHHHHH
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRG--TMGF------SDIVCIIGWVIIVFSKAAWWLDLGRL 135 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~--~l~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (321)
++.+++|.+..+.+++.+...++..++.++.|+++||+|||+ .... +.++.++........++.+.......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVA 320 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 456678999999999999999999999999999999999996 1111 11111111111111223344444444
Q ss_pred HHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----h-hHHHHHHhHHHHHHHHHHh
Q 020792 136 LVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----N-WRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 136 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~-w~~~~~~~~~~~~~~~~~~ 206 (321)
+.+++.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+ + |+..+++.++..++..+..
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 321 LGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 4444444 7888899999999999999999999999999999999888766 5 8888888877766665544
No 126
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.46 E-value=1.8e-12 Score=118.59 Aligned_cols=155 Identities=15% Similarity=0.044 Sum_probs=117.4
Q ss_pred cccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-----hh------h
Q 020792 58 SSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF-----SK------A 126 (321)
Q Consensus 58 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~------~ 126 (321)
.....|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.++.++ .+ +
T Consensus 303 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 303 IMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred hHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 344566677888999988899999999999999999999999999999999988887777766652 11 2
Q ss_pred hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHH
Q 020792 127 AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQ 202 (321)
Q Consensus 127 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~ 202 (321)
...+....++.+.......+....++.|.+|+++|+++.++.+....+|.+++|.+.+.+ +|++.|++.++++++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 462 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLG 462 (481)
T ss_pred HHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHH
Confidence 222222233323222233466677889999999999999999999999999998887665 7888888888887776
Q ss_pred HHHhh-cccCC
Q 020792 203 LIGLC-FIPES 212 (321)
Q Consensus 203 ~~~~~-~~~e~ 212 (321)
.+..+ +.||+
T Consensus 463 ~i~~~~~~~~~ 473 (481)
T TIGR00879 463 LIFVYFFLPET 473 (481)
T ss_pred HHHHheecccC
Confidence 66654 45665
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.45 E-value=5.4e-13 Score=119.94 Aligned_cols=133 Identities=20% Similarity=0.240 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhcc
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEI 155 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 155 (321)
.+.+.++..++..++.+..|+++||+|||+.+..+.++.+++.+...+.++.+.+.+.+++.|++.+...+.....+.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666777888889999999999999999999999888888777777777888888899999999999899888899999
Q ss_pred CCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhc
Q 020792 156 TPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 156 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
.|+++||+..+..+....+|..++|.+++.+ +|+..|++.+++.++..+..++
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999899999999888765 8999999988887777665543
No 128
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.43 E-value=5.7e-12 Score=112.41 Aligned_cols=145 Identities=17% Similarity=0.163 Sum_probs=114.3
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhh
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGM 141 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 141 (321)
+|.+.++.|.+.++.++..+...++..+++++.|++.||+|+|+++..+....+++..... . ........++.|++.
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~ 299 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAG 299 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHH
Confidence 4545566799999999999999999999999999999999999999888777777655433 2 223345667778777
Q ss_pred hhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 142 GLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
+..++.....+.|..|+++++...+..+....+|..++|.+++++ +|++.|.+.+.+.++..+..+..
T Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 300 FTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 777888889999999988888888888888889999999888776 78888888777776665554443
No 129
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.43 E-value=2.5e-12 Score=116.07 Aligned_cols=148 Identities=17% Similarity=0.112 Sum_probs=121.3
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 144 (321)
..+.+|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+...++.++.|++.+..
T Consensus 250 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (417)
T PRK10489 250 ADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAIS 329 (417)
T ss_pred HHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 44448999999999999999999999999999999988888888888888888877777888877788888899988877
Q ss_pred cchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHH-HHHHhhcccCC
Q 020792 145 SYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLV-QLIGLCFIPES 212 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~-~~~~~~~~~e~ 212 (321)
.+...+++.|..|++.||++.++++....+|..++|.+.+.+ +++..++..+.+.++ ..+....+++.
T Consensus 330 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 330 SLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 777788999999999999999999988888888888888766 666677666655444 34444555665
No 130
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=1.2e-11 Score=110.69 Aligned_cols=150 Identities=15% Similarity=0.164 Sum_probs=112.6
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHhhh
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK-AAWWLDLGRLLVGYG 140 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~ 140 (321)
.|.+.+++|.+..+.+...+++.++..++.++.|++.||+|||+.+..+..+.+++..+....+ +...+ ..++.|++
T Consensus 228 lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g 305 (393)
T PRK09705 228 LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLG 305 (393)
T ss_pred HHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHh
Confidence 3434455899999999999999999999999999999999999999888777777665544322 22222 23456777
Q ss_pred hhhhcchhhhhhhccCC-CccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHh-hcccCCh
Q 020792 141 MGLLSYVVPVYIAEITP-KNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGL-CFIPESP 213 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~-~~~~e~~ 213 (321)
.+..++.......+.++ +++|++..++.+....++..++|.+.+++ +|...|++.+...++..+.. .+.||++
T Consensus 306 ~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 306 LGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred ccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 77777877777777775 56789999999999888888898888776 46777777776666655554 4557763
No 131
>PRK03545 putative arabinose transporter; Provisional
Probab=99.41 E-value=1e-11 Score=111.06 Aligned_cols=144 Identities=13% Similarity=0.211 Sum_probs=111.5
Q ss_pred hccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHH-HHHHHhhhhHHHHHHHHHHhhhh
Q 020792 63 SGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGW-VIIVFSKAAWWLDLGRLLVGYGM 141 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~G~~~ 141 (321)
|++.+++|.+..+.+++.+...++..++.++.|+++||+|||.... +..+..++. .+....++.+.+.++.++.|++.
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 4466678999999999999999999999999999999999887544 444333433 33445667777888888889887
Q ss_pred hhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhc
Q 020792 142 GLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
+...+.....+.|..| ++|++++++++....+|..++|.+++.+ +++..|++.+.+.+++++..+.
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHH
Confidence 7766777788888876 5789988888887777777777776654 8999999888887777666543
No 132
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.41 E-value=9.2e-13 Score=121.63 Aligned_cols=138 Identities=15% Similarity=0.148 Sum_probs=105.0
Q ss_pred chhccc-cccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHH
Q 020792 61 AQSGIT-NDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS--KAAWWLDLGRLLV 137 (321)
Q Consensus 61 ~~~~~~-~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 137 (321)
.+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..++.... .+.+.+.+..++.
T Consensus 297 ~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (496)
T PRK03893 297 LLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQ 376 (496)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 445444 6899999999999999999999999999999999999999888877666655443332 3334444444554
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHH
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIP 198 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~ 198 (321)
++......+..+.++.|.+|+++|++.+++.+....+|..++|.+++.+ +|+..+...+..
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 377 QMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 4433344567778999999999999999999988889988888887765 777776654443
No 133
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.40 E-value=1.1e-11 Score=114.73 Aligned_cols=153 Identities=15% Similarity=0.068 Sum_probs=101.8
Q ss_pred chhccccccCCChhhHHH------------HHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhh--
Q 020792 61 AQSGITNDLGLSVAEYSL------------FGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKA-- 126 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-- 126 (321)
..|.+.++.|++..+.+. ...+..++..++.++.++++||+|||++++++.++.+++..+.++..+
T Consensus 310 ~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~ 389 (502)
T TIGR00887 310 NQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL 389 (502)
T ss_pred ccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 355566677776442211 234445566778899999999999999998888877777665554321
Q ss_pred --hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch--------------hhHH
Q 020792 127 --AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--------------NWRI 190 (321)
Q Consensus 127 --~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--------------~w~~ 190 (321)
...+...-+...++..+..+....+.+|.+|++.|+++.++.+....+|.+++|.+.+.+ ++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 469 (502)
T TIGR00887 390 STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGH 469 (502)
T ss_pred chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchH
Confidence 111111111112222233556677889999999999999999999999998888776544 2345
Q ss_pred HHHHhHHHHHHHHHHhhcccCCh
Q 020792 191 LALIGTIPCLVQLIGLCFIPESP 213 (321)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~e~~ 213 (321)
.|++.+++.++..+..+++||++
T Consensus 470 ~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 470 VLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred HHHHHHHHHHHHHHHheEeccCC
Confidence 67777777776666666779983
No 134
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.40 E-value=1e-11 Score=113.42 Aligned_cols=151 Identities=20% Similarity=0.171 Sum_probs=109.3
Q ss_pred cchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhcc-----chHHHHHHHHHHH-HHHHHHHHhhhhH-HHHH
Q 020792 60 PAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIG-----RRGTMGFSDIVCI-IGWVIIVFSKAAW-WLDL 132 (321)
Q Consensus 60 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~-~~~~ 132 (321)
...+.+.+++|++.++.+.+.++..+...+-.+ +|+++||++ ||+.++++.++.+ ++....+..++.. ...+
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~ 125 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAA 125 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 344557888999999999999999999999655 999999998 7777777776663 4333334334433 3344
Q ss_pred HHHHHhhhhhhhcchhhhhhhccCCCccchh---HHhHHHHHHHHHHHHHHHhhcc----hhhHHHHHHhHHHHHHHHHH
Q 020792 133 GRLLVGYGMGLLSYVVPVYIAEITPKNLRGG---FTTVHQLMICIGVSMTYLIGAF----LNWRILALIGTIPCLVQLIG 205 (321)
Q Consensus 133 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~---~~~~~~~~~~~g~~~~~~i~~~----~~w~~~~~~~~~~~~~~~~~ 205 (321)
..++.+++.+...++.-++..|..+ +++.. ..+.......+|..+++.+++. .+|+..|++.+++.++..+.
T Consensus 126 ~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~ 204 (468)
T TIGR00788 126 FIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV 204 (468)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Confidence 7889999999999999999999998 44433 2333333334566666555554 48999999988887777655
Q ss_pred hhcccCC
Q 020792 206 LCFIPES 212 (321)
Q Consensus 206 ~~~~~e~ 212 (321)
.++++|+
T Consensus 205 ~~~~~E~ 211 (468)
T TIGR00788 205 SNLSKER 211 (468)
T ss_pred HHhcccc
Confidence 6677775
No 135
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.40 E-value=4.4e-12 Score=113.68 Aligned_cols=123 Identities=22% Similarity=0.276 Sum_probs=102.5
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWV-IIVFSKAAWWLDLGRLLVGYGMG 142 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~~ 142 (321)
++.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+... +....++.+.+.+..++.|+..+
T Consensus 264 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
T TIGR00891 264 YLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQ 343 (405)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHc
Confidence 46667899999999999999999999999999999999999998888766533332 33344566666666677777777
Q ss_pred hhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 143 LLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
...+..+.++.|.+|+++|+++.++.+....+|..++|.+.+.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 387 (405)
T TIGR00891 344 GIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALL 387 (405)
T ss_pred cchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 77788889999999999999999999999999999999888777
No 136
>TIGR00898 2A0119 cation transport protein.
Probab=99.39 E-value=8.1e-12 Score=115.64 Aligned_cols=136 Identities=19% Similarity=0.162 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHhhhhhhhcchhhhhhhcc
Q 020792 78 LFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAA--WWLDLGRLLVGYGMGLLSYVVPVYIAEI 155 (321)
Q Consensus 78 ~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 155 (321)
+...+..+..+++.++.+++.||+|||+++.++.++.+++.++..+.++. +...+..++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445567777888999999999999999999999888888877776543 4455556666777777788889999999
Q ss_pred CCCccchhHHhHHHHHHHHHHHHHHHhhcch--hhHHHHHHhHHHHHHHHHHhhcccCCh
Q 020792 156 TPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--NWRILALIGTIPCLVQLIGLCFIPESP 213 (321)
Q Consensus 156 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--~w~~~~~~~~~~~~~~~~~~~~~~e~~ 213 (321)
+|++.|+++.++.+....+|.+++|.+.+.. ++..++++.++..++..+..+++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 9999999999999999999999999988722 456677777777777777777889873
No 137
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.37 E-value=1.9e-11 Score=109.84 Aligned_cols=147 Identities=14% Similarity=0.153 Sum_probs=111.0
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHH-HHHHHHHHHHHHHHH-----hhhhHHHHHHH
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMG-FSDIVCIIGWVIIVF-----SKAAWWLDLGR 134 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 134 (321)
..|.+.+++|++..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..+++...... .++.+...+..
T Consensus 244 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (402)
T TIGR00897 244 FLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIA 323 (402)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHH
Confidence 445566779999999999999999999999999999999999988764 333333333333222 24566667778
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
++.|++.+...+ ....+.|..| ++|+++.++.+....+|..++|.+.+.+ ||+..+++.+++.++..+...|+
T Consensus 324 ~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 324 IALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 888888776544 4456677655 5799999999999999999999888766 88889998888777766665554
No 138
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.37 E-value=6.6e-12 Score=115.15 Aligned_cols=150 Identities=13% Similarity=0.116 Sum_probs=105.1
Q ss_pred hccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh----hccc-hHHHHHHHHHHHHHHHHHHHhh------hhHHHH
Q 020792 63 SGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD----YIGR-RGTMGFSDIVCIIGWVIIVFSK------AAWWLD 131 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~~~~~ 131 (321)
.++.+.+|++...+|.+..+.-+..++..|++|+++| |+|| |+.++++.+..+++..++...+ .+..++
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 3466778999999999999999999999999999999 6698 5566677777777765554322 133455
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccC-CCccchhHHhHHHHHHHHHHHHHHHhhc----c-------hhhHHHHHHhHHHH
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEIT-PKNLRGGFTTVHQLMICIGVSMTYLIGA----F-------LNWRILALIGTIPC 199 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~----~-------~~w~~~~~~~~~~~ 199 (321)
+..++.+++.........++..|+. ++++|.+..+....+..+|..+.+.+.. . .+|+....+.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 5566777788788888889999998 5889999888866666665444332221 1 14666666666655
Q ss_pred HHHHHHhh-cccCC
Q 020792 200 LVQLIGLC-FIPES 212 (321)
Q Consensus 200 ~~~~~~~~-~~~e~ 212 (321)
++..+..+ ..+|.
T Consensus 191 ~~~~~~~~~~~~e~ 204 (473)
T PRK10429 191 IVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHcCceec
Confidence 55444433 35654
No 139
>TIGR00895 2A0115 benzoate transport.
Probab=99.37 E-value=4.6e-12 Score=113.20 Aligned_cols=127 Identities=17% Similarity=0.153 Sum_probs=104.9
Q ss_pred cchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 020792 60 PAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 60 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 139 (321)
...|++.+++|.+..+.++..+...++..++.++.|+++||+|||+.+....+..+.+..+.....+.+...+..++.|+
T Consensus 271 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (398)
T TIGR00895 271 NWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGF 350 (398)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 34556778899999999999999999999999999999999999955544444443333333335666777788889999
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+.+...+...+++.|.+|+++|+++.++......+|..++|.+.+.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 351 FVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999887653
No 140
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.37 E-value=6.2e-12 Score=115.38 Aligned_cols=146 Identities=10% Similarity=-0.007 Sum_probs=106.5
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccch-------HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRR-------GTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
++.+++|++..+.+.+.++..++..++.+++|+++||+||| ..+.+..++.+++.++....++.+...+..++
T Consensus 278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l 357 (476)
T PLN00028 278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMIL 357 (476)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 45677899999999999999999999999999999999875 23333333333434444455555555555566
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc---hhhHHHHHHhHHHHHHHHHHhhccc
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF---LNWRILALIGTIPCLVQLIGLCFIP 210 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~---~~w~~~~~~~~~~~~~~~~~~~~~~ 210 (321)
.+++.+...+...+++.+..| ++||...++.+.+..+|+.++|.+... .+|+..|++.+++.+++.+..++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 358 FSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 666655555556666677654 679999999988888888888877542 2689999988888887777766654
No 141
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.35 E-value=1.4e-11 Score=110.52 Aligned_cols=137 Identities=9% Similarity=0.057 Sum_probs=112.6
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhh
Q 020792 70 GLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVP 149 (321)
Q Consensus 70 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 149 (321)
+.+....|.+.++..+...++.+..|++.||+|||+.+.++.++.++...+....++.+.+.+..++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999999988888877777788888888889999988776666666
Q ss_pred hhhhccCCCccchhHHhH-HHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh
Q 020792 150 VYIAEITPKNLRGGFTTV-HQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 150 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~ 206 (321)
.+..+..+++.+++..+. ++....+|..+++.+++++ ||+..|.+.+++.++..++.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 778888888888776665 5677788888888777665 88999998888776665544
No 142
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.35 E-value=4.5e-11 Score=108.65 Aligned_cols=150 Identities=24% Similarity=0.270 Sum_probs=130.5
Q ss_pred hccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccch--HHHHHHHHHHHHHHHHHHH--------hhhhHHHHH
Q 020792 63 SGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRR--GTMGFSDIVCIIGWVIIVF--------SKAAWWLDL 132 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~ 132 (321)
.+..+++|++..+...+..+..+..++|++++|++.||+|.| ++++++++++.+..+...+ .++.+.+.+
T Consensus 306 i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~ 385 (477)
T PF11700_consen 306 IYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWV 385 (477)
T ss_pred HHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHH
Confidence 346678999999999999999999999999999999999999 8888888887666555444 567788999
Q ss_pred HHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHhh
Q 020792 133 GRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLC 207 (321)
Q Consensus 133 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~~ 207 (321)
..++.|++.|+.++..-++.+|+.|+++.+...|++.......+.++|++.+.+ +-|+.+....++.++.+++.+
T Consensus 386 ~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 386 LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999988776 477888887777777777777
Q ss_pred cccCC
Q 020792 208 FIPES 212 (321)
Q Consensus 208 ~~~e~ 212 (321)
+++.+
T Consensus 466 ~v~~~ 470 (477)
T PF11700_consen 466 FVDVE 470 (477)
T ss_pred hccch
Confidence 76654
No 143
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.35 E-value=3.4e-11 Score=109.21 Aligned_cols=148 Identities=14% Similarity=0.024 Sum_probs=96.5
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH--H--hhhhHHHHHHHHHHhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV--F--SKAAWWLDLGRLLVGY 139 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~G~ 139 (321)
++.+++|.+..+.+...++..++..+++++.|+++||+|||+++.++.++.++...... . .++....+..-.+.++
T Consensus 269 ~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (432)
T PRK10406 269 YLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALL 348 (432)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 35667899999999988888888899999999999999999988776655433332221 1 1222222222222223
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHH-HHHHHHHhhcch---h-hHHHHHHhHHHHHHHHHHhhcccC
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICI-GVSMTYLIGAFL---N-WRILALIGTIPCLVQLIGLCFIPE 211 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~~---~-w~~~~~~~~~~~~~~~~~~~~~~e 211 (321)
..+...+....+++|++|++.|+++.++.+...++ +....|.+...+ + |...+++.++..++..+..+++++
T Consensus 349 ~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 349 IVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 33344455678899999999999999998765443 333466655544 3 555666666666666655555433
No 144
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.35 E-value=4.4e-11 Score=109.18 Aligned_cols=144 Identities=15% Similarity=0.154 Sum_probs=97.5
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc--cchHHH-HHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI--GRRGTM-GFSDIVCIIGWVIIVF--SKAAWWLDLGRLLVG 138 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G 138 (321)
++++++|++..+.++...++.++..++.++.|+++||+ |||... .....+..++..+... ..+.+...++.++.|
T Consensus 279 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 358 (452)
T PRK11273 279 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIG 358 (452)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHH
Confidence 35666899999999999999999999999999999999 555432 2222333333322222 233444444455555
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHH-HHHHhhcch----hhHHHHHHhHHHHHHHHHHhh
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVS-MTYLIGAFL----NWRILALIGTIPCLVQLIGLC 207 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~ 207 (321)
.+..........+..|.+|++.||++.++.+....+|.. .+|.+.+.+ ||+..|++.++.++++++...
T Consensus 359 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 359 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 543332333345678999999999999999887777654 467666554 899999888877776665554
No 145
>PRK09669 putative symporter YagG; Provisional
Probab=99.34 E-value=2.2e-11 Score=110.89 Aligned_cols=151 Identities=12% Similarity=0.067 Sum_probs=107.2
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhh----ccch-HHHHHHHHHHHHHHHHHHHhhh------hHHH
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADY----IGRR-GTMGFSDIVCIIGWVIIVFSKA------AWWL 130 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~~ 130 (321)
..++.+.+|++..++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++..+....++ .+.+
T Consensus 33 ~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~ 112 (444)
T PRK09669 33 AYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYA 112 (444)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 445778899999999999999999999999999999998 7875 4555676776666655444332 3455
Q ss_pred HHHHHHHhhhhhhhcchhhhhhhccC-CCccchhHHhHHHHHHHHHHHHHHHh----hcc-------hhhHHHHHHhHHH
Q 020792 131 DLGRLLVGYGMGLLSYVVPVYIAEIT-PKNLRGGFTTVHQLMICIGVSMTYLI----GAF-------LNWRILALIGTIP 198 (321)
Q Consensus 131 ~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~i----~~~-------~~w~~~~~~~~~~ 198 (321)
++..++.+.+.........++.+|+. ++++|++..+....+..+|..+++.+ ... .+|+..+.+.+++
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii 192 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLL 192 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 66666677776677777788999987 56779888787777777766555432 222 2677777777776
Q ss_pred HHHHHHHhh-cccCC
Q 020792 199 CLVQLIGLC-FIPES 212 (321)
Q Consensus 199 ~~~~~~~~~-~~~e~ 212 (321)
.++..+..+ ..+|.
T Consensus 193 ~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 193 GVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHhCCeEEe
Confidence 665554443 34443
No 146
>PRK10504 putative transporter; Provisional
Probab=99.34 E-value=2.7e-11 Score=111.18 Aligned_cols=126 Identities=13% Similarity=0.121 Sum_probs=103.4
Q ss_pred chhcc-ccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHH
Q 020792 61 AQSGI-TNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS---KAAWWLDLGRLL 136 (321)
Q Consensus 61 ~~~~~-~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l 136 (321)
..|++ +..+|.++.+.++......++..++.++.|++.||+|||+++..+.++.++...+..+. ++.+.+.+..++
T Consensus 283 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (471)
T PRK10504 283 MTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFL 362 (471)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 34434 34589999999999999999999999999999999999999998988877776665553 333444555677
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
.|++.+..++....++.+..|++.|+.+.++.+....+|..+++.+.+.+
T Consensus 363 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 363 QGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999988888887655
No 147
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=2e-11 Score=110.45 Aligned_cols=126 Identities=15% Similarity=0.118 Sum_probs=93.7
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHh
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVG 138 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G 138 (321)
.+|.+.++.|.+..+.+...+...++..++.++.|++.||+|||+.+..+.++.++..++....+ +...+.+..+..+
T Consensus 253 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (426)
T PRK12307 253 LLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLM 332 (426)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 34445556789999999999999999999999999999999999999888877666655444322 2222222222222
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
++..+..+..+.++.|.+|+++|+++.++......+|..++|.+.+++
T Consensus 333 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 333 ATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred HhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 232333455677889999999999999999998899999999888776
No 148
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.33 E-value=1.4e-11 Score=108.75 Aligned_cols=175 Identities=21% Similarity=0.275 Sum_probs=138.1
Q ss_pred chHHHHHHHHHHHHHHHHHhhcccccccchhccccc----cCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHH
Q 020792 33 ATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITND----LGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI-GRRGTM 107 (321)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l 107 (321)
.++..+.++..=..--|.++........+ +..+ +|++++++.-+.+.+..-.-+..+++||++||+ |+|+.+
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Y---l~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILY---LYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHH---HHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 44555555555444455554444333333 4444 459999988888888777778889999999997 999999
Q ss_pred HHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCcc--chhHHhHHHHHHHHHHHHHHHhh
Q 020792 108 GFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL--RGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
..+.++++++.++.+.+. +...+.++-.+.++|.|..=+....+++|.+|+++ |-...++++++.++|+.++|.+.
T Consensus 96 ~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~ 175 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIIT 175 (498)
T ss_pred HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHH
Confidence 999999999999999884 77888999999999999999999999999998654 46778888889999999999888
Q ss_pred cch----hhHHHHHHhHHHHHHHHHHhhccc
Q 020792 184 AFL----NWRILALIGTIPCLVQLIGLCFIP 210 (321)
Q Consensus 184 ~~~----~w~~~~~~~~~~~~~~~~~~~~~~ 210 (321)
+++ +|+..|...++-..+.++..+..+
T Consensus 176 ~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 176 GLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 776 899999988887777777665544
No 149
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.33 E-value=9.2e-11 Score=100.09 Aligned_cols=152 Identities=16% Similarity=0.097 Sum_probs=106.2
Q ss_pred cchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 020792 60 PAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 60 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 139 (321)
|+.-.+-+++|++..|++.+....++...+.+++.|.++||+|||+.-+..+++.+++++ +-..++++.++++|++.|+
T Consensus 55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 55 PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHH
Confidence 333345578999999999999999999999999999999999999999999999988885 4556889999999999999
Q ss_pred hhhhhcchhhhhh-hcc----CCCccchhHHhHHH-HHHHHHHHHHHHhhcch----h--hHHHHHHhHHHHHHHHHHhh
Q 020792 140 GMGLLSYVVPVYI-AEI----TPKNLRGGFTTVHQ-LMICIGVSMTYLIGAFL----N--WRILALIGTIPCLVQLIGLC 207 (321)
Q Consensus 140 ~~~~~~~~~~~~~-~~~----~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~~----~--w~~~~~~~~~~~~~~~~~~~ 207 (321)
+....+.+--+++ .|. +|++..+...+... ..+.+-.+.+..++..+ + -..+|.....+.+++.++..
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 9988888776544 444 23222222222222 22222233344444333 3 35678877766666655543
Q ss_pred -cccCC
Q 020792 208 -FIPES 212 (321)
Q Consensus 208 -~~~e~ 212 (321)
..+|+
T Consensus 214 ~~W~EN 219 (354)
T PF05631_consen 214 KTWPEN 219 (354)
T ss_pred hccccc
Confidence 34565
No 150
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.32 E-value=4.7e-11 Score=108.39 Aligned_cols=144 Identities=15% Similarity=0.128 Sum_probs=98.8
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc--cc-hHHHHHHHHHHHHHHHHHH--HhhhhHHHHHHHHHHh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI--GR-RGTMGFSDIVCIIGWVIIV--FSKAAWWLDLGRLLVG 138 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Gr-r~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~G 138 (321)
++.+++|++..+.+...+...++..++.++.|+++||+ ++ |.......+...+...... ...+.....+..++.|
T Consensus 269 ~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 348 (434)
T PRK11663 269 YMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIG 348 (434)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 35577899999999999999999999999999999999 33 3332222212111111111 1223333334444455
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhh
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLC 207 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~ 207 (321)
++...........+.|.+|+++|+++.++.+....+|..++|.+.+.+ +|+..|++.+++.++..+..+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 349 FFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 443322333456778999999999999999999999999998777665 899999888888776665544
No 151
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.32 E-value=9.3e-11 Score=104.64 Aligned_cols=138 Identities=15% Similarity=0.163 Sum_probs=111.5
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 144 (321)
+.++.|.+..+.|.+.++..++..+..++.|++.||+|+|+.+..+.++.+++.++.+..++.+.+++..++.|++.+..
T Consensus 231 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 310 (382)
T PRK11128 231 YWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVC 310 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 33568999999999999999999999999999999999999999999998888888888889998899999999999988
Q ss_pred cchhhhhhhccCCCccchhHHhHHH-HHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHH
Q 020792 145 SYVVPVYIAEITPKNLRGGFTTVHQ-LMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI 204 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~ 204 (321)
.+....++.+. +++++++..+..+ ....+|..++|.+++.+ ++ ..++..+++.++.++
T Consensus 311 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 311 HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 88888888887 4555688888776 55566777788777766 55 355555555554433
No 152
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=9.7e-11 Score=105.11 Aligned_cols=153 Identities=15% Similarity=0.153 Sum_probs=109.2
Q ss_pred cchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh---hh-h--H---HH
Q 020792 60 PAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS---KA-A--W---WL 130 (321)
Q Consensus 60 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~-~--~---~~ 130 (321)
.+...+.++-|++..++-+.+....+...+..+++.++.||+|||+.++++..+..++.+++... .+ . | ..
T Consensus 291 ~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~ 370 (485)
T KOG0569|consen 291 FYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLC 370 (485)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34445788889999999999999999999999999999999999999999999988888766642 11 1 1 12
Q ss_pred HHHHHHHhhhhh-hhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHH----HHhhcchhhHHHHHHhHHHHHHHHH-
Q 020792 131 DLGRLLVGYGMG-LLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMT----YLIGAFLNWRILALIGTIPCLVQLI- 204 (321)
Q Consensus 131 ~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~----~~i~~~~~w~~~~~~~~~~~~~~~~- 204 (321)
+++.++..++.+ +..|+.+-+.+|++|++.|+.+.++......+...+- |.+...+|- +.|++..+.+++..+
T Consensus 371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~ 449 (485)
T KOG0569|consen 371 IAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIY 449 (485)
T ss_pred HHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHH
Confidence 233333333222 2367778899999999999999888877766654433 344444444 556655665555544
Q ss_pred HhhcccCCh
Q 020792 205 GLCFIPESP 213 (321)
Q Consensus 205 ~~~~~~e~~ 213 (321)
.+..+|||+
T Consensus 450 ~~~~lPETk 458 (485)
T KOG0569|consen 450 LYRYLPETK 458 (485)
T ss_pred HHHhCcccC
Confidence 446789993
No 153
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.31 E-value=7.5e-11 Score=97.30 Aligned_cols=152 Identities=17% Similarity=0.276 Sum_probs=115.6
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-------hhhHHHH
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-------KAAWWLD 131 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~~~ 131 (321)
+.+-|.+++.+|+|.+|...+.+.-.+|..+| ++.|.+.||+|++.++.+|.+...++..+...+ .++|.+.
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 44556699999999999999999999999874 888999999999999999999999998877652 4567787
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHH-HHHHHHHHhh
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTI-PCLVQLIGLC 207 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~-~~~~~~~~~~ 207 (321)
+..++.|.+.+...+.......+.||. +||++.++.-...++++.+-..+...+ +-...+.+.+. ..++.++..+
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~ 179 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMF 179 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh
Confidence 778888888777777777778899984 799999999999988877655554443 22223333333 3444455555
Q ss_pred cccCC
Q 020792 208 FIPES 212 (321)
Q Consensus 208 ~~~e~ 212 (321)
+++..
T Consensus 180 ~vr~~ 184 (250)
T PF06813_consen 180 FVRPV 184 (250)
T ss_pred heecc
Confidence 55443
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.31 E-value=8.7e-12 Score=110.06 Aligned_cols=125 Identities=15% Similarity=0.209 Sum_probs=110.3
Q ss_pred hhcccc-ccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHhh
Q 020792 62 QSGITN-DLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKA-AWWLDLGRLLVGY 139 (321)
Q Consensus 62 ~~~~~~-~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~ 139 (321)
.|.+.+ .+|.+..+.+++.+...++..++.++.+++.||+|||+.+..+.++.+++..+..+.++ .+.+.+..++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (365)
T TIGR00900 234 FPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGV 313 (365)
T ss_pred hHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHH
Confidence 344444 48999999999999999999999999999999999999999888887787777777664 7888888999999
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+.+...+....++.|..|+++|++..++.+....+|..++|.+.+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 314 GYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887664
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.30 E-value=8.6e-11 Score=108.16 Aligned_cols=151 Identities=10% Similarity=0.164 Sum_probs=112.3
Q ss_pred hhccccccCCChhhHHHHHH-HHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH---HHh-hhhHHHHHHHHH
Q 020792 62 QSGITNDLGLSVAEYSLFGS-ILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII---VFS-KAAWWLDLGRLL 136 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~-~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~l 136 (321)
.|++.+++|++.++.++... ...++.+++.+++|+++||+|+|+.+.++.++.+++..+. +.. ++.+.+.+.-++
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l 325 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFF 325 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 34466678999999999874 6668999999999999999999988777666555443322 232 344444555566
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhcccCC
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPES 212 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~~~e~ 212 (321)
..+..|...+...++..+..+++.+++..++.+....+|..+++.+.+.+ ||+..|.+.+++.+++++...+++++
T Consensus 326 ~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 326 ENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55555555666788888999999899999999998888887776666655 89999998888888877766655543
No 156
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.30 E-value=1.8e-11 Score=110.94 Aligned_cols=151 Identities=22% Similarity=0.273 Sum_probs=114.8
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh----hccchHH-HHHHHHHHHHHHHHHHHh-h-------hh
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD----YIGRRGT-MGFSDIVCIIGWVIIVFS-K-------AA 127 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~-------~~ 127 (321)
..+++.+.+|+++...|.+..+..+..++..|+.|.++| |+|||+. ++++.+..+++.+++... + ..
T Consensus 24 ~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~ 103 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKL 103 (428)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHH
Confidence 344577788999999999999999999999999999999 8997765 456778888877776654 3 22
Q ss_pred HHHHHHHHHHhhhhhhhcchhhhhhhccCC-CccchhHHhHHHHHHHHHHHHHHHhhcc----h-------hhHHHHHHh
Q 020792 128 WWLDLGRLLVGYGMGLLSYVVPVYIAEITP-KNLRGGFTTVHQLMICIGVSMTYLIGAF----L-------NWRILALIG 195 (321)
Q Consensus 128 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~----~-------~w~~~~~~~ 195 (321)
..+.+..++..++.........++..|+.+ +++|.+..+....+..+|..+...+... + +|++..++.
T Consensus 104 ~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~ 183 (428)
T PF13347_consen 104 VWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVL 183 (428)
T ss_pred HHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHH
Confidence 345666677788888888888999999997 5689999999888888877544433322 2 488888877
Q ss_pred HHHHHHHHHHh-hcccC
Q 020792 196 TIPCLVQLIGL-CFIPE 211 (321)
Q Consensus 196 ~~~~~~~~~~~-~~~~e 211 (321)
+++.++..+.. +..+|
T Consensus 184 ~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 184 AIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHhhhhhheeee
Confidence 77766665555 34565
No 157
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.1e-10 Score=101.88 Aligned_cols=148 Identities=15% Similarity=0.216 Sum_probs=118.4
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHH
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF-SKAAWWLDLGRLLV 137 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 137 (321)
.+.-|.+++..|++.+..+++..++.++..+|..++|+++|| +.|+.+.....+.++..+...+ .++.+..++.-++.
T Consensus 232 tYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~w 310 (394)
T COG2814 232 TYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLW 310 (394)
T ss_pred HhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 344555899999999999999999999999999999999999 9999888887777777666555 45556666667778
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhc
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
|+............+++ .-++.+..+.+++...+++|..+|..+++.. |+....++.+++.+++++..+.
T Consensus 311 g~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 311 GFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 88877766666677777 4456688889988888888888877777665 8888889888888887776654
No 158
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.29 E-value=2.1e-10 Score=104.23 Aligned_cols=118 Identities=18% Similarity=0.344 Sum_probs=97.0
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHhhhhhhhcc
Q 020792 68 DLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-KAAWWLDLGRLLVGYGMGLLSY 146 (321)
Q Consensus 68 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~ 146 (321)
.++ +..+.+++.++..++.+++.+++++++||+|+|+++.++.++.+++.++..+. ++.+.+.+..++.|++.+..++
T Consensus 252 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (437)
T TIGR00792 252 VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTG 330 (437)
T ss_pred ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHH
Confidence 345 55667788888899999999999999999999999999988888877766654 4566677778888999998888
Q ss_pred hhhhhhhccCC-------CccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 147 VVPVYIAEITP-------KNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 147 ~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
...++++|..+ ++.+|...++.+....+|..+++.+.+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 331 LVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999998865 44569999999999999988888777654
No 159
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.27 E-value=3e-11 Score=102.39 Aligned_cols=132 Identities=20% Similarity=0.204 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCcc
Q 020792 81 SILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL 160 (321)
Q Consensus 81 ~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 160 (321)
-+..+...-|.++.+++.||+|||+.+..+.++.+++.++...+.+-....+..+..-++..+.+.+.++|..|.+|++.
T Consensus 388 litslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 388 LITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhh
Confidence 34556677889999999999999999999999999998877765443333333333333444557778899999999999
Q ss_pred chhHHhHHHHHHHHHHHHHHHhhcch--hhHHHHHHhHHHHHHHHHHhhcccCC
Q 020792 161 RGGFTTVHQLMICIGVSMTYLIGAFL--NWRILALIGTIPCLVQLIGLCFIPES 212 (321)
Q Consensus 161 r~~~~~~~~~~~~~g~~~~~~i~~~~--~w~~~~~~~~~~~~~~~~~~~~~~e~ 212 (321)
|++..|.......+|+++.|+++-.. +-..+..+.+.+.+++.+...++|-+
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeec
Confidence 99999999999999999999998333 33456666777778888888888744
No 160
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.27 E-value=7.1e-12 Score=102.52 Aligned_cols=148 Identities=16% Similarity=0.150 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh-hccchHHHHHHHHHH
Q 020792 36 AVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD-YIGRRGTMGFSDIVC 114 (321)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~ 114 (321)
++...+..+++..+..++..-..+....++..+.+++.++..++.+++..-..+..+++|++.| |+|.|..-++-++..
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 3444555555555555555555555566677788888888889999999999999999999999 568888777777777
Q ss_pred HHHHHHHHH---hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 115 IIGWVIIVF---SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 115 ~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
.++.++++. .+.+|++.++|++.|+|.-..-.+.+.+..-||..|+.+.++|+......+|+.+--.+.
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm 192 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLM 192 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeec
Confidence 777776664 689999999999999998777777889999999999999999999999999876543333
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.26 E-value=1.9e-10 Score=105.80 Aligned_cols=146 Identities=17% Similarity=0.291 Sum_probs=123.0
Q ss_pred chhcc-ccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 020792 61 AQSGI-TNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 61 ~~~~~-~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 139 (321)
.+|.+ ++.+|.+....|++.+...+|.++|+++.+++.+|+++++.+..+.++.+++.+..+++++.+...+..++.|+
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~ 319 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGA 319 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 45544 45789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~ 206 (321)
+.....+...+.+.+..|++.||+.++++.+....+..+|.++.+.+ |.+..+.+.++..++..++.
T Consensus 320 ~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 320 AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 99888888899999999999999999999877666666655555544 77777777666555544443
No 162
>PRK15075 citrate-proton symporter; Provisional
Probab=99.24 E-value=3.5e-10 Score=102.69 Aligned_cols=127 Identities=18% Similarity=0.146 Sum_probs=89.3
Q ss_pred cchhc-cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHH-HH-H--hhhhHHHHHHH
Q 020792 60 PAQSG-ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVI-IV-F--SKAAWWLDLGR 134 (321)
Q Consensus 60 ~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~ 134 (321)
...|. +++.+|++..+.++......++..++.+++|+++||+|||++++.+.++.++...+ .. . .++.....+..
T Consensus 259 ~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (434)
T PRK15075 259 VYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVE 338 (434)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 33443 45568999999999999999999999999999999999999888765544332221 11 1 22333344445
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHH-HHHHHHHHHHHhhcch
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQL-MICIGVSMTYLIGAFL 186 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~i~~~~ 186 (321)
++.+++.+...+....++.|.+|+++|++..++.+. +..++..++|.+.+++
T Consensus 339 ~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 339 LWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 556666666666677889999999999999988544 4444456677766554
No 163
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.24 E-value=1.3e-10 Score=105.68 Aligned_cols=149 Identities=11% Similarity=0.101 Sum_probs=95.6
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHH---HHHHHHHHh--hhhHHHHHHHHHHh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCI---IGWVIIVFS--KAAWWLDLGRLLVG 138 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~l~G 138 (321)
++++..|.+..+.++...+..++..++.++.|+++||+|+++....+..... ++....... .+.+...+..++.|
T Consensus 277 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 356 (438)
T TIGR00712 277 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIG 356 (438)
T ss_pred HHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 4556689999999999999999999999999999999965432222322211 122222221 23333333444455
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHH-HHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccCC
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIG-VSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPES 212 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e~ 212 (321)
++.............|.+|+++|+++.++.+....+| ..++|.+.+.+ ||...+++.++..+++.+.. +..||+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 357 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4432222222346789999999999999998776665 45677666554 78888887776666655554 445665
No 164
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.23 E-value=2.2e-10 Score=116.22 Aligned_cols=136 Identities=13% Similarity=0.173 Sum_probs=115.2
Q ss_pred ccccccCCChh-hHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhh
Q 020792 64 GITNDLGLSVA-EYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMG 142 (321)
Q Consensus 64 ~~~~~~~~s~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 142 (321)
++.+.+|.+.. +.+++.+...++.+++.++.|+++||+++|+++.++.++.+++.++..+..+.+.+++..++.|++.+
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAG 337 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 46677899998 99999999999999999999999999999999999888888888888888888888888899999999
Q ss_pred hhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHH
Q 020792 143 LLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPC 199 (321)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~ 199 (321)
...+...+++.+..|++.||+++++.+....+|..+++.++..+ ++...+++.+.+.
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 399 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVT 399 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 88888999999999999999999999998888887776666544 3444455444443
No 165
>PRK10054 putative transporter; Provisional
Probab=99.22 E-value=1.6e-10 Score=103.52 Aligned_cols=139 Identities=12% Similarity=0.148 Sum_probs=107.8
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHhhhhhhhc
Q 020792 67 NDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-KAAWWLDLGRLLVGYGMGLLS 145 (321)
Q Consensus 67 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~ 145 (321)
++.+.+....+++.....+.....+++.|++.||+++|+.+..++++.+++.....+. ++.+.+.++.++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 4556677778888888888888888999999999999999999988888877766654 567777778889999988878
Q ss_pred chhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh
Q 020792 146 YVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 146 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~ 206 (321)
+.....+.+..|++.|+++.+..+ ...+|..++|.+++.+ +.+..|++.+....+..++.
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 888889999999999998887655 4447778888777666 56666666555544444443
No 166
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.22 E-value=1.5e-10 Score=100.24 Aligned_cols=148 Identities=24% Similarity=0.273 Sum_probs=129.6
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 144 (321)
-.+++|++..+...+.....+..++|++++|+|.||+|.|+++..+.++..+.++..-+......+.++..+.|...|+.
T Consensus 279 g~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~ 358 (438)
T COG2270 279 GAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGA 358 (438)
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchH
Confidence 45689999999999999999999999999999999999999999999999888887777777777888889999999999
Q ss_pred cchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHhhcccCC
Q 020792 145 SYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPES 212 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~~~~~e~ 212 (321)
+...-++.+++.|+++-++..|+++.....++.++|++-+.+ +-|..+....++..+.++..+++|++
T Consensus 359 qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 359 QASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999889999999999999999999888776 45666666666666666666666654
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.21 E-value=1.2e-09 Score=97.80 Aligned_cols=141 Identities=12% Similarity=-0.008 Sum_probs=103.8
Q ss_pred cccccCCChhhHHHHHHHHHH-HHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH------hhhhHHHHHHHHHH
Q 020792 65 ITNDLGLSVAEYSLFGSILTI-GAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF------SKAAWWLDLGRLLV 137 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~ 137 (321)
+.+|.|++.++.+++.....+ ...++.++.|++.||+|+|+.+..+.++.++....... .++...+.....+.
T Consensus 234 ~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (390)
T TIGR02718 234 YLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFG 313 (390)
T ss_pred HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHH
Confidence 345589999999999888764 66777899999999999999988877665333322221 12223334444555
Q ss_pred hhhhhhhcchhhhhhhccCCC-ccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHH
Q 020792 138 GYGMGLLSYVVPVYIAEITPK-NLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG 205 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~ 205 (321)
+++.+..++.....+.+..++ +++++..+..+....+|..++|.+++.+ |++..|+..+++.+++.+.
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 314 SLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 667777777788887777776 7789999999999999999999888766 7888888777766665443
No 168
>PRK11462 putative transporter; Provisional
Probab=99.21 E-value=1.8e-09 Score=98.63 Aligned_cols=143 Identities=11% Similarity=0.024 Sum_probs=105.9
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhh----ccchHH-HHHHHHHHHHHHHHHHHhhh------hHHHHH
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADY----IGRRGT-MGFSDIVCIIGWVIIVFSKA------AWWLDL 132 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~------~~~~~~ 132 (321)
++.+..|+++..+|.+..+.-+.-++..|+.|.++|| +|||+. ++++.+..+++.+++...++ ...+.+
T Consensus 35 fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~ 114 (460)
T PRK11462 35 FYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAI 114 (460)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 4667789999999999999999999999999999995 787754 55666777777666554332 344555
Q ss_pred HHHHHhhhhhhhcchhhhhhhccCC-CccchhHHhHHHHHHHHHHHHHHHhhc----ch-------hhHHHHHHhHHHHH
Q 020792 133 GRLLVGYGMGLLSYVVPVYIAEITP-KNLRGGFTTVHQLMICIGVSMTYLIGA----FL-------NWRILALIGTIPCL 200 (321)
Q Consensus 133 ~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~----~~-------~w~~~~~~~~~~~~ 200 (321)
..++..++.........++..|+.+ +++|++..++...+..+|..+++.+.. .. +|+....+.+++.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 6666778888888888899999987 788999999999888887666554431 11 46666666666655
Q ss_pred HHHHHh
Q 020792 201 VQLIGL 206 (321)
Q Consensus 201 ~~~~~~ 206 (321)
+..++.
T Consensus 195 i~~~i~ 200 (460)
T PRK11462 195 MMLAFC 200 (460)
T ss_pred HHHHHH
Confidence 554443
No 169
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.19 E-value=1.8e-10 Score=105.42 Aligned_cols=154 Identities=19% Similarity=0.226 Sum_probs=137.8
Q ss_pred ccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhcc--chHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 020792 57 YSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIG--RRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGR 134 (321)
Q Consensus 57 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (321)
.....+|...++++++..+.+.+.++..+...++.++.|+++|+.. ++.+..++.+..+++.+.+.+.++++.+...-
T Consensus 316 ~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~ 395 (509)
T KOG2504|consen 316 VPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFS 395 (509)
T ss_pred HHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3345677788899999999999999999999999999999999998 55677888888888888999999999999999
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
.+.|+..|........++.|+.+.++-..+.|+.....+++..++|++.+.+ +|...|+..++..+++.+.++..
T Consensus 396 ~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 396 ILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 9999999998888888999999999889999999999999999999999877 58889999999888888777666
Q ss_pred c
Q 020792 210 P 210 (321)
Q Consensus 210 ~ 210 (321)
+
T Consensus 476 ~ 476 (509)
T KOG2504|consen 476 R 476 (509)
T ss_pred H
Confidence 5
No 170
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.19 E-value=9.8e-11 Score=101.32 Aligned_cols=143 Identities=18% Similarity=0.286 Sum_probs=115.1
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc--cchHHH-HHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI--GRRGTM-GFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVG 138 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G 138 (321)
++.|..|+|..++++..+.+-++.+.|.++.||++||+ |||.+. ++.+++..++......++ |+++..++.++.|
T Consensus 278 YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iG 357 (448)
T COG2271 278 YLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIG 357 (448)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHH
Confidence 57888999999999999999999999999999999987 677654 444555555555556655 4588888889999
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHH-HHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICI-GVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~ 206 (321)
+..-+..-.......|..|++--|++.|+......+ |...+....+++ ||...|.+..+.++++.++.
T Consensus 358 f~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 358 FLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred HHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHH
Confidence 887777777778889999999889999999998888 777777666655 89999888777766665544
No 171
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.18 E-value=7.9e-11 Score=104.43 Aligned_cols=128 Identities=16% Similarity=0.234 Sum_probs=92.2
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccc-hHH-HHHHH-HHHHHHHHHHHH--hhhhHHHHHHHHHHh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGR-RGT-MGFSD-IVCIIGWVIIVF--SKAAWWLDLGRLLVG 138 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~-l~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~l~G 138 (321)
++.+++|.+..+.++..+...++..++.++.|+++||.++ |+. +.... ....++...... ..+.+...+..++.|
T Consensus 242 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 321 (379)
T TIGR00881 242 YLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALG 321 (379)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 4567789999999999999999999999999999998643 332 22222 122222222222 234455556667777
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHH
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRIL 191 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~ 191 (321)
+......+....+..|.+|+++|+++.++.+....+|..++|.+.+.+ ||++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 322 FLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred HHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 665555666678899999999999999999999999998888887665 56543
No 172
>PRK09848 glucuronide transporter; Provisional
Probab=99.18 E-value=1e-09 Score=100.02 Aligned_cols=123 Identities=14% Similarity=0.179 Sum_probs=83.9
Q ss_pred hccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc----cchHHH-HHHHHHHHHHHHHH-HHh----h--hhHHH
Q 020792 63 SGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI----GRRGTM-GFSDIVCIIGWVII-VFS----K--AAWWL 130 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~~~~-~~~----~--~~~~~ 130 (321)
.++.+.+|++..++|.+.++..+..++..+++|+++||. |||+.. +++.+...+...+. ... . ..+..
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 357788899999999999999999999999999999996 777654 55555444444432 221 1 12334
Q ss_pred HHHHHHHhhhhhhhcchhhhhhhccCC-CccchhHHhHHHHH-----HHHHHHHHHHhhcc
Q 020792 131 DLGRLLVGYGMGLLSYVVPVYIAEITP-KNLRGGFTTVHQLM-----ICIGVSMTYLIGAF 185 (321)
Q Consensus 131 ~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~-----~~~g~~~~~~i~~~ 185 (321)
++..++.+++.+...+...++..++.+ +++|.+..+....+ ..++..++|.+...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445567788887777777777777664 46787776665543 23445556655543
No 173
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.18 E-value=1.8e-10 Score=101.50 Aligned_cols=143 Identities=20% Similarity=0.275 Sum_probs=82.1
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHH--HHHHHHH-HH----hhhhH-HHHHHHHH
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVC--IIGWVII-VF----SKAAW-WLDLGRLL 136 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~--~~~~~~~-~~----~~~~~-~~~~~~~l 136 (321)
+.+..|+|.++.|.+.++..+...+.+|+.|.++||+|.|+-++...... ..+.+.. .+ ..|.+ ..+++.+.
T Consensus 34 L~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~ 113 (412)
T PF01306_consen 34 LTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIY 113 (412)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTT
T ss_pred HccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45568999999999999999999999999999999999666554433222 2233222 12 23332 22333344
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
.|++..+..++.-+++.++... .+.-.|-.-+..++|.+++..+++.+ +-+..||+....+++..++.++.
T Consensus 114 l~~~f~~~~~~~Ea~~er~sr~--~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 114 LGLVFNAGVPLSEAYAERVSRR--NGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp TTTTTTTHHHHHHHHHHHHHHH--HSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHcccchHHHHHHHHHHHH--hcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHc
Confidence 4555555555555555444321 13444555555566666666666555 45567777666555555444443
No 174
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.18 E-value=4.6e-10 Score=100.53 Aligned_cols=131 Identities=17% Similarity=0.161 Sum_probs=94.2
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 144 (321)
+.+++|.+..+.+.+.+...++..++.++.+++.||+|||+++.++.++..++..+..+.++.+...+...+.+.+.+..
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 309 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVG 309 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999999999888888877777665554444444444444333
Q ss_pred cchhhhhhhccCCCccc-hhHHhHHHHHHHHHHHHHHHhhcchhhHHHHHHhHH
Q 020792 145 SYVVPVYIAEITPKNLR-GGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTI 197 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~i~~~~~w~~~~~~~~~ 197 (321)
++. ....+..|.++| +.+.+....+..+|..+++.+.+.+++.......+.
T Consensus 310 ~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 310 FGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred hHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 332 333445565555 666777777777777787777777776554444443
No 175
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.17 E-value=1.5e-09 Score=97.67 Aligned_cols=137 Identities=14% Similarity=0.177 Sum_probs=104.8
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-----KAAWWLDLGRLLVGY 139 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~ 139 (321)
+.+++|.++.+.++......++..++.++.|+++||+|+|+.+.++.++.+++..+..+. .+.+.+.+..++.|+
T Consensus 242 ~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 242 LISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAF 321 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 456789999999988888888999999999999999999999998888777776666543 345566777888899
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHH
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQ 202 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~ 202 (321)
+.+...+......... ++++||+..+..+....+|..+++.+.+.+ ++....+..++..++.
T Consensus 322 g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 322 GIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 8887776665554433 447899999999999999999998888776 4444444444444443
No 176
>PRK09848 glucuronide transporter; Provisional
Probab=99.17 E-value=2.8e-09 Score=97.28 Aligned_cols=121 Identities=14% Similarity=0.114 Sum_probs=95.8
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMG 142 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~ 142 (321)
+++.+|.+....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +.+.+.+..++.|+|.+
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~ 334 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG 334 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 4556777666555555555777888999999999999999999999988888777666643 56666777788899999
Q ss_pred hhcchhhhhhhccCCCc-------cchhHHhHHHHHHHHHHHHHHHhhcc
Q 020792 143 LLSYVVPVYIAEITPKN-------LRGGFTTVHQLMICIGVSMTYLIGAF 185 (321)
Q Consensus 143 ~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~i~~~ 185 (321)
...+...++.+|..|.+ ++|...++.+....+|..+++.+.+.
T Consensus 335 ~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 335 VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888653 24888899999888888888776654
No 177
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.16 E-value=1.6e-09 Score=93.72 Aligned_cols=124 Identities=12% Similarity=0.124 Sum_probs=97.3
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcch
Q 020792 68 DLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYV 147 (321)
Q Consensus 68 ~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 147 (321)
.+|+++++.+...+.+..+..++.++.+++.||+|+|+++.++.++.+++.++....++... ..+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999999999999998888887777766655444332 34556889999999999
Q ss_pred hhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHH
Q 020792 148 VPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALI 194 (321)
Q Consensus 148 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~ 194 (321)
..+...+.+|++ .+.+.++. ....+|..+.|.+.+.+ +.+..+++
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 999999988865 45555665 45567888888766655 56666654
No 178
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=9.6e-10 Score=98.84 Aligned_cols=147 Identities=13% Similarity=0.162 Sum_probs=101.8
Q ss_pred hccccccCCChhhHHHHHHHHH-HHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH---HHh-hhhHHHHHHH---
Q 020792 63 SGITNDLGLSVAEYSLFGSILT-IGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII---VFS-KAAWWLDLGR--- 134 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~--- 134 (321)
+.+.+++|+++++.+++.+... ++..++.++.|++.||+|+|+.+.++.++.++..+.. +.. ++.+.+.+.-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 3466778999999999886654 5688999999999999999998877776665554333 343 3445554444
Q ss_pred -HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcchhhHHHHHHhHHHHHHHHHHhhcc
Q 020792 135 -LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 135 -~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
+..|++.+..++....++.+.+|.++++...+....+..+++.++..+...+||+..|.+.++++++.++..+..
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777788888888888887766554444434443344445555555699999999888877776655443
No 179
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.15 E-value=6.9e-10 Score=101.73 Aligned_cols=148 Identities=18% Similarity=0.073 Sum_probs=99.6
Q ss_pred chh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHH--------HHHHHHHH--HHHHHHHHH-hhhhH
Q 020792 61 AQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGT--------MGFSDIVC--IIGWVIIVF-SKAAW 128 (321)
Q Consensus 61 ~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~--------l~~~~~~~--~~~~~~~~~-~~~~~ 128 (321)
.+| ++.+.+|.+..+.++..++..++..++.++.|+++||+++|+. +..+.... ++..+.... ..+.+
T Consensus 283 ~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (465)
T TIGR00894 283 YLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFY 362 (465)
T ss_pred HHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchH
Confidence 344 4567789999999999999999999999999999999875531 11111111 111111222 22333
Q ss_pred HHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-------hhHHHHHHhHHHHHH
Q 020792 129 WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-------NWRILALIGTIPCLV 201 (321)
Q Consensus 129 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-------~w~~~~~~~~~~~~~ 201 (321)
..++.-.+.+.+.+...+.......|..|+ .+|.+.++.+....+|+.++|.+.+.+ +|+..|.+.++..++
T Consensus 363 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i 441 (465)
T TIGR00894 363 LTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNIL 441 (465)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHH
Confidence 344444455555554455455555666665 789999999999999999999888764 388888888877777
Q ss_pred HHHHhhcc
Q 020792 202 QLIGLCFI 209 (321)
Q Consensus 202 ~~~~~~~~ 209 (321)
..+...++
T Consensus 442 ~~i~~~~~ 449 (465)
T TIGR00894 442 CVIFYLIF 449 (465)
T ss_pred HHHHeeee
Confidence 76665544
No 180
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.15 E-value=1e-09 Score=97.83 Aligned_cols=118 Identities=17% Similarity=0.313 Sum_probs=93.8
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-----KAAWWLDLGRLLVGY 139 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~ 139 (321)
+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+..+.++..++..+.... ++...+.+..++.|+
T Consensus 233 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 312 (385)
T TIGR00710 233 YIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGI 312 (385)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 556789999999999999999999999999999999999999988887777776655543 233445556777889
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHH-HHHHHHHHhh
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMIC-IGVSMTYLIG 183 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~i~ 183 (321)
+.+...+.......|..| ++|+++.++.+.... .|.+.++.++
T Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 313 GNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888899887 568999998876654 4566666655
No 181
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.15 E-value=4.3e-10 Score=103.54 Aligned_cols=123 Identities=15% Similarity=0.224 Sum_probs=105.6
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF----SKAAWWLDLGRLLVGY 139 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~G~ 139 (321)
++++.+|.++.+.++......++..++.++.|++.||+|||+++.++.++.+++..+..+ ..+.+.+....++.|+
T Consensus 281 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 360 (485)
T TIGR00711 281 YLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGF 360 (485)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Confidence 355668999999999999999999999999999999999999999998888888777663 2345666677888999
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+.+..++.......+..|+++|+.+.++.+....+|..+++.+.+.+
T Consensus 361 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 361 GMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888877777788889999999999999999999999998877665
No 182
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.14 E-value=1.8e-09 Score=96.34 Aligned_cols=143 Identities=13% Similarity=0.241 Sum_probs=101.4
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHhhh
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF-SKAAWWLDLGRLLVGYG 140 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~ 140 (321)
.|++.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+...+..++.+++
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 302 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAG 302 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34566778999999999999999999999999999999999999999888887777655543 45555556666666666
Q ss_pred hhhhcchhhh-hhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHh
Q 020792 141 MGLLSYVVPV-YIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 141 ~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~ 206 (321)
.....+.... ...+..+++.++.. ..+....+|..++|.+++.+ +|+..+.+.+++.++.....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 303 LFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 5444443333 34444455544544 23556677888888777664 68888888776655554443
No 183
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.14 E-value=4.7e-10 Score=101.13 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=93.4
Q ss_pred cchhccccc--cCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHH-HHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 60 PAQSGITND--LGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGT-MGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 60 ~~~~~~~~~--~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
..+|.+.++ .|.+..+.+.......++..++.++.|+++||++||+. +....+..+++..+....++.....++-.+
T Consensus 263 ~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (412)
T TIGR02332 263 IWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIM 342 (412)
T ss_pred HHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 345545554 36778888999999999999999999999999997774 344444444433222222222222222222
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHH
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIP 198 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~ 198 (321)
.+++.....+.......|.+|+++|+++.++.+....+|..++|.+.+.+ +|++.+++.++.
T Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 343 ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 33333333344445567889999999999999999999999999877665 588887766554
No 184
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.13 E-value=1.8e-09 Score=96.33 Aligned_cols=148 Identities=19% Similarity=0.325 Sum_probs=116.3
Q ss_pred cccccC-CChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHH----HHHHh
Q 020792 65 ITNDLG-LSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-KAAWWLDLG----RLLVG 138 (321)
Q Consensus 65 ~~~~~~-~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~l~G 138 (321)
..++.| .+....+.+.++..++-++.-...+++..|+|.|++++++.+..++=..+.+.. ++.+...+. ..+.|
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG 312 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHG 312 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhh
Confidence 345555 777888888888889999999999999999999999999999999988888877 555443333 45699
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHH-HHHHHHHHHHhhcch----------hhHHHHHHhHHHHHHHHHHh-
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLM-ICIGVSMTYLIGAFL----------NWRILALIGTIPCLVQLIGL- 206 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~i~~~~----------~w~~~~~~~~~~~~~~~~~~- 206 (321)
+..+..+.....++.+..|++.|+++.++++.. .++|..++..+++++ .|...+.+.+.+.++..++.
T Consensus 313 ~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 313 LTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998764 678888888888876 24455666666655555544
Q ss_pred hcccCC
Q 020792 207 CFIPES 212 (321)
Q Consensus 207 ~~~~e~ 212 (321)
++++|+
T Consensus 393 ~~fk~~ 398 (400)
T PF03825_consen 393 ILFKPK 398 (400)
T ss_pred hhccCC
Confidence 344543
No 185
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.13 E-value=4e-09 Score=92.56 Aligned_cols=155 Identities=15% Similarity=0.230 Sum_probs=125.3
Q ss_pred ccchhccccc-cCCChhhHH-HHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 59 SPAQSGITND-LGLSVAEYS-LFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 59 ~~~~~~~~~~-~~~s~~~~~-~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
....|++.+. .|++..|+. -+.-+..-.+.+..++...+.|..|.|++++++.+...+...+..+.++...+-+..+.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 3345566665 899988875 45666777788888999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch------hhHHHHHHhHHHHHHHHHHhhccc
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFIP 210 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~------~w~~~~~~~~~~~~~~~~~~~~~~ 210 (321)
-|++.+. ..+..+++-...|+++--++.+....+..+|..++..++..+ +++...++......++++..+++|
T Consensus 104 yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 104 YGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999765 777888888888887778888888888888877777777655 566666666666667777778888
Q ss_pred CChH
Q 020792 211 ESPR 214 (321)
Q Consensus 211 e~~~ 214 (321)
..++
T Consensus 183 ~~~~ 186 (412)
T PF01770_consen 183 MPKR 186 (412)
T ss_pred CCCc
Confidence 7654
No 186
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.13 E-value=7e-10 Score=97.97 Aligned_cols=111 Identities=17% Similarity=0.178 Sum_probs=91.3
Q ss_pred hccccccCCChhhHHHHHHHHH-HHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-----------hhhHHH
Q 020792 63 SGITNDLGLSVAEYSLFGSILT-IGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-----------KAAWWL 130 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----------~~~~~~ 130 (321)
|.+.+++|.+.++.+.+.+... ++..++.+++|++.||+|||+.+..+.++.+++..+..+. ++.+.+
T Consensus 233 ~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (356)
T TIGR00901 233 TLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLML 312 (356)
T ss_pred HHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHH
Confidence 3343458999999998887665 6788999999999999999999888888877766654442 345667
Q ss_pred HHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHH
Q 020792 131 DLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMIC 173 (321)
Q Consensus 131 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 173 (321)
..+.++.+++.+..++...+++.|.+|+++||+..++.+...+
T Consensus 313 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 313 FLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 7788889999999999999999999999999999999887654
No 187
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.13 E-value=3.7e-09 Score=94.78 Aligned_cols=140 Identities=12% Similarity=0.125 Sum_probs=103.0
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhh
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGM 141 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 141 (321)
.|.+.+++|++..+.+.......++..++.++.+++.||.+++..+....+..+....+....++.+.+.+..++.|++.
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~ 319 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTF 319 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 35566788999999999999999999999999999999965444344333333333444455667777778889999999
Q ss_pred hhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHH
Q 020792 142 GLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQ 202 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~ 202 (321)
+...+...+++.+..|+ ++++..+.......+|..+++.+++.+ |++..++..+.+.++.
T Consensus 320 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 320 ALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 88888888888888874 456666666667777777777777666 7777777766554433
No 188
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.12 E-value=2.5e-09 Score=94.48 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=96.3
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYI-GRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 139 (321)
.+|.+.++.|.+..+.+.+.++..++.+++.++.|++.||+ +||+.+.++.++.+++.++..+..+..... .-++.|+
T Consensus 219 ~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~ 297 (355)
T TIGR00896 219 WLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGL 297 (355)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHH
Confidence 34545566899999999999999999999999999999999 567777777777777776666654433222 3467899
Q ss_pred hhhhhcchhhhhhhccCC-CccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITP-KNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+.+..++.....+.+..+ +++++...++.+....+|..++|.+.+.+
T Consensus 298 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 298 GQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred hhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888887777766555 45568888888888888888888877765
No 189
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.12 E-value=1.8e-09 Score=95.68 Aligned_cols=147 Identities=13% Similarity=0.041 Sum_probs=98.2
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccc---hHHHHH-HHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGR---RGTMGF-SDIVCIIGWVIIVFSKAAWWLDLGRLL 136 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr---r~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (321)
.+|.+.++.|++.. .+...++..+...++ .++++||..| |+.... ..++.++...+.++..+.+...+.-.+
T Consensus 214 wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l 289 (368)
T TIGR00903 214 WLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGI 289 (368)
T ss_pred HHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 45545566777754 555555555555555 4677777754 333332 344444444444555444444555566
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch--hhHHHHHHhHHHHHHHHHHhhcccC
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--NWRILALIGTIPCLVQLIGLCFIPE 211 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--~w~~~~~~~~~~~~~~~~~~~~~~e 211 (321)
.+++....++..+++.+|.+|++.|+++.|+.+....+|+..+|.+.+.+ +-+..|.+.+++.++..+..+.+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 290 AGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77777777787889999999999999999999999999998888777544 6667777777777766665544454
No 190
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.12 E-value=3.6e-09 Score=97.19 Aligned_cols=122 Identities=11% Similarity=0.154 Sum_probs=91.3
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-----hhhhHHHHHHHHHHhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF-----SKAAWWLDLGRLLVGY 139 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~ 139 (321)
+.+...-+.+..+++.+...++.+++.+++++++||+|+|+.+.++.++.+++.+...+ .++.+.+++.-++.|+
T Consensus 257 ~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~ 336 (473)
T PRK10429 257 YFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNI 336 (473)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHH
Confidence 43333335566777778778899999999999999999999999888776666554432 3455667777788899
Q ss_pred hhhhhcchhhhhhhccCC-----Cccc--hhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITP-----KNLR--GGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~-----~~~r--~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+.+..++...++++|..+ ..+| |...+......-+|..+++.+.+.+
T Consensus 337 ~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 337 GTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999989888999999855 3333 6678888888888887777666543
No 191
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.12 E-value=9.1e-10 Score=111.68 Aligned_cols=135 Identities=12% Similarity=0.130 Sum_probs=108.5
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-------------------
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS------------------- 124 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------------------- 124 (321)
++.+.+|.+..+.|++.+++.++.++++++.|+++||.++++.+..+.++.+++.+...+.
T Consensus 251 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (1140)
T PRK06814 251 LAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLS 330 (1140)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhc
Confidence 3566689999999999999999999999999999998887776666665555555434332
Q ss_pred -hhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHH
Q 020792 125 -KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIP 198 (321)
Q Consensus 125 -~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~ 198 (321)
.+.+.+.+..++.|++.+...+...+++.+..|++.||++++..+....+|..+++++.+.+ ++...+++.+.+
T Consensus 331 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 331 KRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred ccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 66777888888999999998989999999999999999999999999998888888777655 445555544443
No 192
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.10 E-value=1.1e-09 Score=96.43 Aligned_cols=146 Identities=18% Similarity=0.197 Sum_probs=118.8
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Q 020792 67 NDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSY 146 (321)
Q Consensus 67 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 146 (321)
++-+.+....|.+.++..+..++...+.+++.+|+|.|+.++++.+++++=...++++++.+.+.+.+.+.|+..+....
T Consensus 252 ~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lv 331 (412)
T PF01306_consen 252 QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLV 331 (412)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 34445666789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCccchhHHhHH-HHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccCC
Q 020792 147 VVPVYIAEITPKNLRGGFTTVH-QLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPES 212 (321)
Q Consensus 147 ~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e~ 212 (321)
...-|+.+.+|+|..++...+. +.+..+|..+.+.+++.+ |.+..|++.+.+.++..++. +.++++
T Consensus 332 a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 332 AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999999999998777776664 667778887777777665 78888988888777666555 445544
No 193
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.10 E-value=2.4e-10 Score=100.42 Aligned_cols=121 Identities=23% Similarity=0.411 Sum_probs=103.1
Q ss_pred cchhc-cccccCCC-hhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHH
Q 020792 60 PAQSG-ITNDLGLS-VAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS---KAAWWLDLGR 134 (321)
Q Consensus 60 ~~~~~-~~~~~~~s-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 134 (321)
...|. +.+++|.+ ..+.+...++..++..++.++.|+++||+|+|+...+......++.....+. ++.....+..
T Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (352)
T PF07690_consen 227 FFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIAL 306 (352)
T ss_dssp HHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHH
T ss_pred cccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34444 58889999 7899999999999999999999999999999888777777766666555443 3456677788
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHH
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTY 180 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 180 (321)
++.|++.+...+....++.|..|+++||++.++.+....+|..++|
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 307 FLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 8899999999999999999999999999999999999999999887
No 194
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.10 E-value=1.3e-09 Score=89.50 Aligned_cols=121 Identities=17% Similarity=0.135 Sum_probs=96.6
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCII-GWVIIVFSKAAWWLDLGRLLVGYGMG 142 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~~~ 142 (321)
.+++++|+|+..++.+.+......++.+++.|.++||+|++...+.+..+..+ +.....++ .+.-..+..+.|+...
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHH
Confidence 47889999999999999999999999999999999999999877666544433 33333332 2223345567788776
Q ss_pred hhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 143 LLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
..-...+..++...|.++.|++.+..+...++|-.+.|++.+.+
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 66666778888888989899999999999999999999999887
No 195
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.09 E-value=1.7e-09 Score=99.90 Aligned_cols=123 Identities=13% Similarity=0.135 Sum_probs=106.8
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS---KAAWWLDLGRLLVGYG 140 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~ 140 (321)
++++.+|.++.+.|.......++..++.++.|++.||+|+|+++..+.++.+++..+.... ++.+...+..++.|++
T Consensus 285 ~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g 364 (495)
T PRK14995 285 ELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFS 364 (495)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Confidence 4677789999999999999999999999999999999999999998888887776655432 3555566778899999
Q ss_pred hhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 141 MGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
.|...+.....+.+..|+++++.+.++.+....+|..+++.+.+.+
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 365 AASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888889999999999999999999999999998887765
No 196
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1e-09 Score=97.71 Aligned_cols=148 Identities=20% Similarity=0.198 Sum_probs=115.1
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh----hccchH-HHHHHHHHHHHHHHHHHHhhh------hHHHHHH
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD----YIGRRG-TMGFSDIVCIIGWVIIVFSKA------AWWLDLG 133 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~~~~~ 133 (321)
+.+.+|+++..+|.+..+.-+.-++.-|+.|.++| |+||+| .++++.+..++.+.++..+++ .....+.
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vt 118 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVT 118 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHH
Confidence 66779999999999999999999999999999999 578665 566777888888777776653 4556677
Q ss_pred HHHHhhhhhhhcchhhhhhhccCC-CccchhHHhHHHHHHHHHHHHHHHhh----cch-------hhHHHHHHhHHHHHH
Q 020792 134 RLLVGYGMGLLSYVVPVYIAEITP-KNLRGGFTTVHQLMICIGVSMTYLIG----AFL-------NWRILALIGTIPCLV 201 (321)
Q Consensus 134 ~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~----~~~-------~w~~~~~~~~~~~~~ 201 (321)
..+.+++.........++.+|+.+ +++|.+..+.-..+..+|..+...+. ..+ ||+....+.+++.++
T Consensus 119 Y~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i 198 (467)
T COG2211 119 YMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVI 198 (467)
T ss_pred HHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Confidence 888999999988889999999875 78899999998888888855443332 222 688777777777776
Q ss_pred HHHHhhc-ccCC
Q 020792 202 QLIGLCF-IPES 212 (321)
Q Consensus 202 ~~~~~~~-~~e~ 212 (321)
.++.+++ .+|+
T Consensus 199 ~~l~~~~~v~ER 210 (467)
T COG2211 199 LLLFCFFNVKER 210 (467)
T ss_pred HHHHHHHHhhcc
Confidence 6666544 4555
No 197
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.08 E-value=4.4e-09 Score=94.23 Aligned_cols=133 Identities=11% Similarity=0.094 Sum_probs=103.7
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 143 (321)
++++.+|.++.+.|++.+...++..++++..+++.||.++|+++..+.. .++...+..+.++.+...+..++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 4566789999999999999999999999999999999999988887753 344444556667777677777888998888
Q ss_pred hcchhhhhhhccCCCcc-chhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHH
Q 020792 144 LSYVVPVYIAEITPKNL-RGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTI 197 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~ 197 (321)
..+...+.+.+..|++. +|++.++.+....+|..++..+...+ +-+..+.+.+.
T Consensus 310 ~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (393)
T PRK11195 310 FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGF 367 (393)
T ss_pred hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 78878888888766654 69999999999999988887776654 44444444333
No 198
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.08 E-value=3.4e-09 Score=95.20 Aligned_cols=126 Identities=13% Similarity=0.056 Sum_probs=100.3
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh-hccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD-YIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 139 (321)
.+|.+.++.+.++.+.+++.+...++...+..+.+++.| |++.++.+..+.++.+++.++.++.++.+.+.+..++.++
T Consensus 230 ~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 309 (400)
T PRK11646 230 MLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYI 309 (400)
T ss_pred hhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 345444554447788888888877777666655666665 5776777778888888887777788888777777788888
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+.+...+...+++.|..|+++||+..++.+....+|..++|.+++.+
T Consensus 310 g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 310 GSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred HHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHH
Confidence 88888888899999999999999999999999999999999888876
No 199
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.07 E-value=1.4e-09 Score=94.24 Aligned_cols=145 Identities=17% Similarity=0.050 Sum_probs=111.9
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-------hhhHHHHHHHHH
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-------KAAWWLDLGRLL 136 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l 136 (321)
++.++|+.++.+.+.+.....+...+..+.+|+|+||+|.+|++.+....++++..+.+.. .+....++..+.
T Consensus 244 ~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T COG2223 244 YLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLA 323 (417)
T ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHH
Confidence 5788899999999999999999999999999999999999999999999998888877765 334444444444
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
+++..|........++...+|+ +-|.+.|+.....++|..+-|..-+.. +++..|++.....+++.+..+..
T Consensus 324 l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 324 LFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455566666677765 468899999999999987776655444 58888888888877777765443
No 200
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.03 E-value=2.3e-08 Score=88.97 Aligned_cols=120 Identities=14% Similarity=0.192 Sum_probs=85.2
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH---H-hhhhHHHHHHHHHHhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV---F-SKAAWWLDLGRLLVGYG 140 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~l~G~~ 140 (321)
+.+.+|.++.+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+... . ..+.+...++-.+.+.+
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGC 300 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 5566899999999999999999999999999999999999999888766444332221 1 22344444444444444
Q ss_pred hhhhcchhhhhhhccCCCccchhHHhHHHHH-HHHHHHHHHHhhcc
Q 020792 141 MGLLSYVVPVYIAEITPKNLRGGFTTVHQLM-ICIGVSMTYLIGAF 185 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~i~~~ 185 (321)
.+........++.|..| ++|+.+.+..+.. ..+|..+++.++..
T Consensus 301 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 301 VSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44555555667778776 6788888887654 45777777776543
No 201
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.03 E-value=9.9e-09 Score=93.07 Aligned_cols=119 Identities=19% Similarity=0.386 Sum_probs=100.7
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHhhhhhhh
Q 020792 67 NDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 67 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~ 144 (321)
..+|.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+ +.+.+++..++.|++.+..
T Consensus 254 ~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~ 332 (428)
T PF13347_consen 254 YVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAF 332 (428)
T ss_pred HHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccc
Confidence 335544 6678888899999999999999999999999999999999999998888775 8899999999999999999
Q ss_pred cchhhhhhhccCCCc------c-chhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 145 SYVVPVYIAEITPKN------L-RGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~------~-r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
++...++++|..+.. + .|...+..+....+|..+++.+.+.+
T Consensus 333 ~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 333 FVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred ccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 999999999998732 2 28888888888888888777766543
No 202
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.00 E-value=1.2e-07 Score=86.50 Aligned_cols=139 Identities=22% Similarity=0.281 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHH-HHHHHHHHHHHHHh--hhhHHHHHHHHHHhhhhhhhcchhhhh
Q 020792 75 EYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFS-DIVCIIGWVIIVFS--KAAWWLDLGRLLVGYGMGLLSYVVPVY 151 (321)
Q Consensus 75 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~ 151 (321)
..++..++..+..++..|+.|-++|+-|+||.++.. .++..+++.++.+. ++++...+..++..++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999999999977755544 44455556665553 344555555666667888888899999
Q ss_pred hhccCCCccc--------------------------hhHHhHHHHHHHHHHHHHHHhhcch------------hhHHHHH
Q 020792 152 IAEITPKNLR--------------------------GGFTTVHQLMICIGVSMTYLIGAFL------------NWRILAL 193 (321)
Q Consensus 152 ~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~i~~~~------------~w~~~~~ 193 (321)
+.|..+++.+ ++..+.-.....+|+++.-.+.-.+ +-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999888 8888887777777777655544322 2477777
Q ss_pred HhHHHHHHHHH-HhhcccCCh
Q 020792 194 IGTIPCLVQLI-GLCFIPESP 213 (321)
Q Consensus 194 ~~~~~~~~~~~-~~~~~~e~~ 213 (321)
+.++.-++..+ ..+++||.|
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~ 251 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRP 251 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCC
Confidence 77766554444 445677775
No 203
>PRK10133 L-fucose transporter; Provisional
Probab=99.00 E-value=9.3e-09 Score=93.39 Aligned_cols=130 Identities=10% Similarity=0.016 Sum_probs=98.7
Q ss_pred ccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhc
Q 020792 66 TNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLS 145 (321)
Q Consensus 66 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 145 (321)
++.+|.++.+.++....+.++..++.++.|++.||+|||+++..+.++.+++..+..+.++.+ ......+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999888877777666655555432 3456678899999999
Q ss_pred chhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----h-hHHHHHHhHHH
Q 020792 146 YVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----N-WRILALIGTIP 198 (321)
Q Consensus 146 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~-w~~~~~~~~~~ 198 (321)
|...+...|.+|++ .+.+.++..... +|..++|.+.+.+ | -+..|++..+.
T Consensus 366 P~~~s~a~~~~~~~-~~~as~l~~~~~-~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~ 421 (438)
T PRK10133 366 PTIFSLGIKNLGQD-TKYGSSFIVMTI-IGGGIVTPVMGFVSDAAGNIPTAELIPALC 421 (438)
T ss_pred HHHHHHHHcccchh-hccchhHHhHHh-ccchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 99999999998764 466666665433 4555565555554 4 45556544433
No 204
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.99 E-value=7.1e-08 Score=86.16 Aligned_cols=121 Identities=16% Similarity=0.268 Sum_probs=96.6
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMG 142 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~ 142 (321)
....+|-++....+.......+.+++.+++.++.+|+|+|+++.++.++.+++..+..+.+ +.+.+++..++.+++.+
T Consensus 263 ~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~ 342 (467)
T COG2211 263 VTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTG 342 (467)
T ss_pred EEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhh
Confidence 4444676777778888888888888899999999999999999999999999998888765 67888888899999999
Q ss_pred hhcchhhhhhhccCC-----Cccc--hhHHhHHHHHHHHHHHHHHHhhcc
Q 020792 143 LLSYVVPVYIAEITP-----KNLR--GGFTTVHQLMICIGVSMTYLIGAF 185 (321)
Q Consensus 143 ~~~~~~~~~~~~~~~-----~~~r--~~~~~~~~~~~~~g~~~~~~i~~~ 185 (321)
...+..+++++|..+ +.+| |...+......=+|..++..+.++
T Consensus 343 ~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 343 IANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred ccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988763 2223 666677666666666666555443
No 205
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.98 E-value=1.8e-08 Score=90.92 Aligned_cols=136 Identities=12% Similarity=-0.113 Sum_probs=90.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-h-----hhhHHHHHHHHHHhhhhhhhcc
Q 020792 73 VAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF-S-----KAAWWLDLGRLLVGYGMGLLSY 146 (321)
Q Consensus 73 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~l~G~~~~~~~~ 146 (321)
.........+..+...+..+++|+++||+|+|+++.++.+..+++...... . .+++.+.+..+...++.|....
T Consensus 285 ~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng 364 (462)
T PRK15034 285 DVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG 364 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccch
Confidence 333333445566788889999999999999999999998877776643222 1 2455555555555555555566
Q ss_pred hhhhhhhccCCC------c---------------cchhHHhHHHHHHHHHHHHHHHhhcch-----hhHHHHHHhHHHHH
Q 020792 147 VVPVYIAEITPK------N---------------LRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCL 200 (321)
Q Consensus 147 ~~~~~~~~~~~~------~---------------~r~~~~~~~~~~~~~g~~~~~~i~~~~-----~w~~~~~~~~~~~~ 200 (321)
....++.+.+|+ + +-|.+.|+......+|+.+.|.+-+.. ++...|+...+..+
T Consensus 365 svfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~ 444 (462)
T PRK15034 365 STFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYI 444 (462)
T ss_pred HHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 666677777764 1 236778888888888877777554333 46667777666666
Q ss_pred HHHHHhhc
Q 020792 201 VQLIGLCF 208 (321)
Q Consensus 201 ~~~~~~~~ 208 (321)
++.+..++
T Consensus 445 ~~~~~~w~ 452 (462)
T PRK15034 445 VCVLLTWL 452 (462)
T ss_pred HHHHHHHH
Confidence 66555544
No 206
>PRK09669 putative symporter YagG; Provisional
Probab=98.93 E-value=1.3e-07 Score=86.31 Aligned_cols=114 Identities=14% Similarity=0.211 Sum_probs=85.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHhhhhhhhcchhhh
Q 020792 73 VAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF--SKAAWWLDLGRLLVGYGMGLLSYVVPV 150 (321)
Q Consensus 73 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~ 150 (321)
++..+.+.....+..+++.+++++++||+|+|+.+.++.++.+++.....+ .++.+.+.+..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455666677888889999999999999999998887766654433222 356667777888999999999999999
Q ss_pred hhhccCCC------ccc-hhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 151 YIAEITPK------NLR-GGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 151 ~~~~~~~~------~~r-~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+++|..+. ++| |...+.......+|..+++.+++.+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998752 222 6677888777788888887777554
No 207
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.92 E-value=1.1e-09 Score=95.76 Aligned_cols=174 Identities=16% Similarity=0.030 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHhhcccccccchhccccccCCChhhHHH--------H-HHHHHHHHHHHHHhHHHhhhhccchHHHHHH
Q 020792 40 STFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSL--------F-GSILTIGAMIGAIMSGKIADYIGRRGTMGFS 110 (321)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~--------~-~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~ 110 (321)
.++..+..++..-..+...+.....+.+..|+.+.+... . ..+...+++.|-.+...++|++|||+..+.+
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~G 384 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMG 384 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhh
Confidence 344445556655555544455555666666665443222 1 1222333334666677899999999999999
Q ss_pred HHHHHHHHHHHHHhhh----hHHHHHHHHHHhh-hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc
Q 020792 111 DIVCIIGWVIIVFSKA----AWWLDLGRLLVGY-GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF 185 (321)
Q Consensus 111 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 185 (321)
.+++++..+..+...| ...+++...+..+ +.-+.......+-+|.||.+.|++..|+.....-.|++++...-..
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhH
Confidence 9999999988887655 2223333333332 2222344456777999999999999999998888888777654433
Q ss_pred ---------hhhHHHHHHhHHHHHHHHHHhhcccCCh
Q 020792 186 ---------LNWRILALIGTIPCLVQLIGLCFIPESP 213 (321)
Q Consensus 186 ---------~~w~~~~~~~~~~~~~~~~~~~~~~e~~ 213 (321)
.+.++++++.+.+.++..+..+++||++
T Consensus 465 ~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 465 LTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred hhhccCCccccchHHHHHHHHHHHHhHheeEEeeccc
Confidence 3788999999999999998889999984
No 208
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.91 E-value=2.3e-08 Score=86.48 Aligned_cols=88 Identities=15% Similarity=0.143 Sum_probs=73.7
Q ss_pred HHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---------------
Q 020792 122 VFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--------------- 186 (321)
Q Consensus 122 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--------------- 186 (321)
+...+++.++++.++.|.|.+...+..+.++++..|++++++.+++.+..+.+|..++|.+++.+
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34578999999999999999999999999999999999899999999999999999999988632
Q ss_pred -----hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 187 -----NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 187 -----~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
.|+++|++.+.+.++..+.+.+.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~ 112 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFL 112 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 58888887766655544444333
No 209
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.2e-07 Score=80.83 Aligned_cols=169 Identities=17% Similarity=0.131 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhcc-chHHHHHHHHH
Q 020792 35 SAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIG-RRGTMGFSDIV 113 (321)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~ 113 (321)
+..|.+...+.+..+.++... ..+|.+..|.|+|..+.|++.+...+.....++....+.+|.. +|+..+...++
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~----~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVI----GWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHH----HHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 445666666666666665544 4567788899999999999999999999999999999999664 66666666777
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccc-hhHHhHHHHHHHHHHHHHHHhhcch-----h
Q 020792 114 CIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR-GGFTTVHQLMICIGVSMTYLIGAFL-----N 187 (321)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~i~~~~-----~ 187 (321)
+.++.+.+.+.+....+.- -++.|++.|..++.....+.+-.+..+. +...++.+....+=..++|.+.+++ +
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs 362 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC
Confidence 7777666655543221111 4899999999999999999888776554 6666666666555566888888887 8
Q ss_pred hHHHHHHhHHHHHHHHHHhhc
Q 020792 188 WRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 188 w~~~~~~~~~~~~~~~~~~~~ 208 (321)
|+..++..+...++..+.-+.
T Consensus 363 w~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 363 WSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHhh
Confidence 999888877777766665544
No 210
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.89 E-value=1.7e-08 Score=91.14 Aligned_cols=126 Identities=21% Similarity=0.368 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh--hhhhhcchhhhhhhccCCCc
Q 020792 82 ILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY--GMGLLSYVVPVYIAEITPKN 159 (321)
Q Consensus 82 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~--~~~~~~~~~~~~~~~~~~~~ 159 (321)
...+...+.++..|.++||+|||..+.+..+...+..++..+.. +| +++ +.++ +.+..+....++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchh
Confidence 34677888999999999999999999999988888877776665 33 333 3433 33456777889999999999
Q ss_pred cchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHh-hcccCC
Q 020792 160 LRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPES 212 (321)
Q Consensus 160 ~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~-~~~~e~ 212 (321)
+|....++.+.....+..++|.+++.. +.-.++.+..+..++..+.. +++||+
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccc
Confidence 999999999998888888888888776 66677888887777776665 567887
No 211
>PRK11043 putative transporter; Provisional
Probab=98.87 E-value=1.8e-07 Score=83.99 Aligned_cols=124 Identities=14% Similarity=0.069 Sum_probs=92.8
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH---HH--hhhhHHHHHHHHH
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII---VF--SKAAWWLDLGRLL 136 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~l 136 (321)
.|.+.+++|.+..+.++......++..++.+..+++.||+|+|+.+....+..+++.... .. .++.+.+++...+
T Consensus 226 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (401)
T PRK11043 226 SPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCV 305 (401)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 444556789999999998888889999999999999999999987766555544443322 22 2344555566677
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
.|++.+..++.......|..| ++|+++.++.+.....+...++.+.+.+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 306 MAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 888888888888888777776 5699999999988776766776666655
No 212
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.87 E-value=7.1e-08 Score=82.39 Aligned_cols=145 Identities=28% Similarity=0.417 Sum_probs=112.8
Q ss_pred cccccchhccccccCCCh--hhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhh--hHHHH
Q 020792 56 GYSSPAQSGITNDLGLSV--AEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKA--AWWLD 131 (321)
Q Consensus 56 ~~~~~~~~~~~~~~~~s~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 131 (321)
.......+.+..+++.+. ...++..+...++..++.++.|.++||+|||+.+..+.....++.++..+..+ .+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (338)
T COG0477 19 GLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLL 98 (338)
T ss_pred chHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 333445555666666555 47899999999999999999999999999998888888765666666666665 88899
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccCCC-ccchhHHhHHHH-HHHHHHHHHHHhhcch------hhHHHHHHhHHHHH
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEITPK-NLRGGFTTVHQL-MICIGVSMTYLIGAFL------NWRILALIGTIPCL 200 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~i~~~~------~w~~~~~~~~~~~~ 200 (321)
+.|++.|++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.++..+ +|+..+........
T Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 999999999999999999999999998 668888888877 5777777777665443 68886665555443
No 213
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.86 E-value=4e-07 Score=85.95 Aligned_cols=145 Identities=20% Similarity=0.278 Sum_probs=114.8
Q ss_pred hccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh-hccchHHHHHHHHHHHHHHHHHHHhhh--------hHHHHHH
Q 020792 63 SGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD-YIGRRGTMGFSDIVCIIGWVIIVFSKA--------AWWLDLG 133 (321)
Q Consensus 63 ~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 133 (321)
-++.+.+|.+.+.+..+...+....-+..+++|+++| ++||++.++++.++..++..+.++... ....+++
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 3456678999998888888888888888999999999 569999999999999999888776421 1235566
Q ss_pred HHHHhhhhhhhcchhhhhhhccCCCcc---chhHHhHHHHHHHHHHHHHHHhhcch-----------hhHHHHHHhHHHH
Q 020792 134 RLLVGYGMGLLSYVVPVYIAEITPKNL---RGGFTTVHQLMICIGVSMTYLIGAFL-----------NWRILALIGTIPC 199 (321)
Q Consensus 134 ~~l~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~i~~~~-----------~w~~~~~~~~~~~ 199 (321)
-.+..+|.|+.-+...+...|.+++++ |-....+++.+.++|+.+++.+..++ +|...|.+.++..
T Consensus 92 LaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m 171 (654)
T TIGR00926 92 LALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILM 171 (654)
T ss_pred HHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHH
Confidence 777888999999999999999998653 46677888888999998887776554 3888888888777
Q ss_pred HHHHHHhh
Q 020792 200 LVQLIGLC 207 (321)
Q Consensus 200 ~~~~~~~~ 207 (321)
+++++...
T Consensus 172 ~ia~lvf~ 179 (654)
T TIGR00926 172 ILALIVFM 179 (654)
T ss_pred HHHHHHHH
Confidence 77766543
No 214
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.86 E-value=3.9e-08 Score=90.06 Aligned_cols=146 Identities=14% Similarity=0.127 Sum_probs=114.2
Q ss_pred ccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHH
Q 020792 66 TNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS----------KAAWWLDLGRL 135 (321)
Q Consensus 66 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 135 (321)
.+.+|.++.+.|.+.....++.+++....+++.+|++.|+++.++.++.+++....... ++.+.+....+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 35689999999999999999999999999999999999999999999988877554311 23334555567
Q ss_pred HHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----h-----hHHHHH---HhHHHHHHHH
Q 020792 136 LVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----N-----WRILAL---IGTIPCLVQL 203 (321)
Q Consensus 136 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~-----w~~~~~---~~~~~~~~~~ 203 (321)
+.+++.+..+.....++.+..|++++|+..++.....++|..+++.+++.+ | ++..+. +..+..++.+
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l 439 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPL 439 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHH
Confidence 888888888999999999999999999999999999999999888877665 3 333333 2333444444
Q ss_pred HHhhcccC
Q 020792 204 IGLCFIPE 211 (321)
Q Consensus 204 ~~~~~~~e 211 (321)
...+++|+
T Consensus 440 ~~~~llP~ 447 (468)
T TIGR00788 440 PLLHLLPR 447 (468)
T ss_pred HHHHhCCC
Confidence 44456785
No 215
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.85 E-value=3.3e-11 Score=109.96 Aligned_cols=151 Identities=21% Similarity=0.176 Sum_probs=97.9
Q ss_pred cchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH--H---hhh----hHHH
Q 020792 60 PAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV--F---SKA----AWWL 130 (321)
Q Consensus 60 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~---~~~----~~~~ 130 (321)
.+.+.+.++.+.+.. -.......+...++.++..++.||+|||++++.+.++.+++.+..+ . .++ -...
T Consensus 274 ~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (451)
T PF00083_consen 274 YYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILS 351 (451)
T ss_pred ccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344557777777766 2233344455666777778999999999999999988888877664 1 111 1112
Q ss_pred HHHHHHHhhhhh-hhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHH-
Q 020792 131 DLGRLLVGYGMG-LLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI- 204 (321)
Q Consensus 131 ~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~- 204 (321)
++.-.+..++.+ +..+....+..|.+|++.|+++.++......++..+++.+...+ +-...+.+.+++.++..+
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~ 431 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIF 431 (451)
T ss_pred ceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhh
Confidence 222222222222 34566668889999999999999999988888887777666554 312344555555444444
Q ss_pred HhhcccCC
Q 020792 205 GLCFIPES 212 (321)
Q Consensus 205 ~~~~~~e~ 212 (321)
..+++||+
T Consensus 432 ~~~~lpET 439 (451)
T PF00083_consen 432 VYFFLPET 439 (451)
T ss_pred eeEEEeeC
Confidence 44678999
No 216
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.79 E-value=1.5e-08 Score=89.68 Aligned_cols=111 Identities=14% Similarity=0.116 Sum_probs=84.0
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH--hh--hhHHHHHHHHHHhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF--SK--AAWWLDLGRLLVGY 139 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~G~ 139 (321)
++++.+|.+..+.+.+.++..++..++.+++|+++||+|||+.+..+....+.+..+..+ .. +.+...+...+.++
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (366)
T TIGR00886 251 FFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFF 330 (366)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHH
Confidence 466678999999999999999999999999999999999998887777666666555443 22 45544455555555
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHH
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIG 175 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 175 (321)
+.|...+.....+.+..| ++||.+.|+.+...++|
T Consensus 331 ~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 331 FSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred Hhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 556666667777888887 57899999988776554
No 217
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=5.2e-07 Score=83.79 Aligned_cols=154 Identities=20% Similarity=0.107 Sum_probs=97.8
Q ss_pred cccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh----------
Q 020792 58 SSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAA---------- 127 (321)
Q Consensus 58 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---------- 127 (321)
...+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.++.+.....
T Consensus 314 ~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~ 392 (513)
T KOG0254|consen 314 VFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKG 392 (513)
T ss_pred EEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 345556677777766544 566667777777888888999999999999999999999999877753111
Q ss_pred ---HHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhc----chhhHHHHHHhHHHHH
Q 020792 128 ---WWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGA----FLNWRILALIGTIPCL 200 (321)
Q Consensus 128 ---~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~----~~~w~~~~~~~~~~~~ 200 (321)
..+...-+.......+..++.+.+.+|.+|.+.|+++.++......+...+-..... ..++...|.+.+..+.
T Consensus 393 ~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~ 472 (513)
T KOG0254|consen 393 AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICL 472 (513)
T ss_pred hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHH
Confidence 111111122222223345555678899999999999888877665555433222211 1122445555444444
Q ss_pred HHHH--HhhcccCC
Q 020792 201 VQLI--GLCFIPES 212 (321)
Q Consensus 201 ~~~~--~~~~~~e~ 212 (321)
+... ..+++||+
T Consensus 473 ~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 473 LSLIIFVFFFVPET 486 (513)
T ss_pred HHHHHHheEEcccC
Confidence 4444 44678998
No 218
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.79 E-value=3.1e-07 Score=82.30 Aligned_cols=122 Identities=20% Similarity=0.164 Sum_probs=92.5
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHH-HHHHHHHHHHH--hhhhHHHHHHHHHHhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDI-VCIIGWVIIVF--SKAAWWLDLGRLLVGYGM 141 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~ 141 (321)
+.+.+|.+..+.+++.....++..+++++.+++.||++++........ ...+....... ..+.+.+.+..++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 555589999999999999999999999999999999984443322222 22222222222 234566777788899999
Q ss_pred hhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcchh
Q 020792 142 GLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLN 187 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~~ 187 (321)
+..++....+..|.+| ++++...++.+....+|..+++.+++.+.
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999887 56899999999999999999999887773
No 219
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.75 E-value=5.6e-07 Score=78.49 Aligned_cols=121 Identities=19% Similarity=0.245 Sum_probs=94.3
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhcc-----chHHHH-HHHHHHHHHHHHHHH-----hh-------h
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIG-----RRGTMG-FSDIVCIIGWVIIVF-----SK-------A 126 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-----rr~~l~-~~~~~~~~~~~~~~~-----~~-------~ 126 (321)
+..|++++..-.+.+.++..+... ..+.+|+.||+.+ ||..++ .|.+..+.+..+..+ +. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 456788898888888888877655 5899999999999 886654 455555555544443 22 2
Q ss_pred hH----HHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 127 AW----WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 127 ~~----~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
.+ ...++..+.|++.+...+...+++.|..|+++|+++.++......+|.+++..+.+.+
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRL 148 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 3445567889999999999999999999999999999999999999999888877665
No 220
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.75 E-value=7.7e-08 Score=87.25 Aligned_cols=164 Identities=13% Similarity=0.091 Sum_probs=106.7
Q ss_pred HHHHHHhhcccccccchh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccc---------hHHHHHHHHHHH
Q 020792 46 CGSYVFGSAIGYSSPAQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGR---------RGTMGFSDIVCI 115 (321)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr---------r~~l~~~~~~~~ 115 (321)
+..+........+..+.| ++.+-+|.+..+.|++.++..+...+..+++|.++||.-+ |..=.++....+
T Consensus 265 ~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~a 344 (466)
T KOG2532|consen 265 ISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPA 344 (466)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHH
Confidence 333333333333444555 5777899999999999999999999999999999998855 223344555555
Q ss_pred HHHHHHHHhhhhHH-HHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch-------h
Q 020792 116 IGWVIIVFSKAAWW-LDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-------N 187 (321)
Q Consensus 116 ~~~~~~~~~~~~~~-~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~-------~ 187 (321)
++.+..++.++... ..+.-+..+.+..+........-....-+++-+..+++.+....+..+++|.+.+.+ .
T Consensus 345 i~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~e 424 (466)
T KOG2532|consen 345 VFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREE 424 (466)
T ss_pred HHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHH
Confidence 55555565542111 111111122222222222222222221455679999999999999999999998776 7
Q ss_pred hHHHHHHhHHHHHHHHHHhhcc
Q 020792 188 WRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 188 w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
|+.+|++.+++.++..+.+.++
T Consensus 425 W~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 425 WRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHhchheeEe
Confidence 9999999999888877666444
No 221
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.73 E-value=3.9e-07 Score=83.67 Aligned_cols=132 Identities=15% Similarity=0.187 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhccc-----hHHH--HHHHHHHHHHHHHHHH---------hhhhHHHHHHHHHHhh
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIADYIGR-----RGTM--GFSDIVCIIGWVIIVF---------SKAAWWLDLGRLLVGY 139 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-----r~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~G~ 139 (321)
.+++.++..+..++.+++..++..|.+| +... .+|+++.+++....++ ..+.++++...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788888888888888876654333333 3433 7788888888777664 4688899999999999
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhh
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLC 207 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~ 207 (321)
|.....|...+++.+..|++.||++++++.....+|..+++.+.... +|...|...++..++..++.+
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988887654 677777777766665555443
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.70 E-value=7.8e-07 Score=82.23 Aligned_cols=130 Identities=15% Similarity=0.167 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHHhH----HHhhhhccchHHHHHHHHHHHHHHHHHHHhhh---------hHHHHHHHHHHhhhhh
Q 020792 76 YSLFGSILTIGAMIGAIMS----GKIADYIGRRGTMGFSDIVCIIGWVIIVFSKA---------AWWLDLGRLLVGYGMG 142 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~----g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~G~~~~ 142 (321)
.+++.++..+...+..++. +++.||++.++.+.++.++.+++..+.+...+ .++++...++.|++..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4566666666666666665 66666666678889999999999888777654 4578889999999999
Q ss_pred hhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch--------------hhHHHHHHhHHHHHHHHHH
Q 020792 143 LLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--------------NWRILALIGTIPCLVQLIG 205 (321)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--------------~w~~~~~~~~~~~~~~~~~ 205 (321)
...|...+++.+..|++.||+++|.+..+..+|..++..+.+.. +..+.|...++..++..++
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888877776665311 2556776666655544333
No 223
>PRK11462 putative transporter; Provisional
Probab=98.68 E-value=8.7e-07 Score=81.08 Aligned_cols=112 Identities=12% Similarity=0.169 Sum_probs=71.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHhhhhhhhcchhhh
Q 020792 73 VAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS--KAAWWLDLGRLLVGYGMGLLSYVVPV 150 (321)
Q Consensus 73 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~ 150 (321)
+...+.+...+.++.+++.+++++++||+|+|+++..+..+.++..++..+. ++.+.+.+.-++.|++.+...+...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667788888999999999999999999998776555444433333332 22333444556677777666666677
Q ss_pred hhhccCC-----Cccc--hhHHhHHHHHHHHHHHHHHHhhc
Q 020792 151 YIAEITP-----KNLR--GGFTTVHQLMICIGVSMTYLIGA 184 (321)
Q Consensus 151 ~~~~~~~-----~~~r--~~~~~~~~~~~~~g~~~~~~i~~ 184 (321)
+++|..+ +.+| |...+......-+|..+++.+++
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777655 2233 55456555666666666655543
No 224
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.66 E-value=2.7e-07 Score=83.53 Aligned_cols=150 Identities=19% Similarity=0.205 Sum_probs=110.9
Q ss_pred chhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhcc-----chHHHHHHHHHHHHHHHHHHHh----hhhHHHH
Q 020792 61 AQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIG-----RRGTMGFSDIVCIIGWVIIVFS----KAAWWLD 131 (321)
Q Consensus 61 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~----~~~~~~~ 131 (321)
..+++.+++|+++.+...+.++..+-..+ .++.|.++|-+- ||+-++++.++.+++.+..+.. .+.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 44568899999999999888888887665 477899999773 5556666776665555555542 3455666
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccCC--CccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHH
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEITP--KNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG 205 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~ 205 (321)
+.-++..++......+.-+++.|... ++.||...+.......+|.+++..+++.+ +++..|.+.+++.++..+.
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 67788888999999999999999873 33367778888888888888888777665 6778888877776666555
Q ss_pred hhcccC
Q 020792 206 LCFIPE 211 (321)
Q Consensus 206 ~~~~~e 211 (321)
.+++.|
T Consensus 171 ~~~~~~ 176 (433)
T PF03092_consen 171 ALFLLE 176 (433)
T ss_pred HHHhhh
Confidence 554443
No 225
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.64 E-value=1.2e-07 Score=63.91 Aligned_cols=75 Identities=15% Similarity=0.273 Sum_probs=69.1
Q ss_pred cccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 020792 56 GYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWL 130 (321)
Q Consensus 56 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 130 (321)
..+.|.+|.++++.++|.++.+++.+.+.+|+.+|.+...++.++..+++.+..+.+...++...+++.++.+.+
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 344789999999999999999999999999999999999999999999999999999999999999998887654
No 226
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.62 E-value=1.6e-06 Score=75.72 Aligned_cols=145 Identities=18% Similarity=0.357 Sum_probs=116.7
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh-hccchHHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHH
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD-YIGRRGTMGFSDIVCIIGWVIIVF---SKAAWWLDLGRLLV 137 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 137 (321)
-|+=.+-||++..+...++.....|..++....|++.. |.++++.-.+++...+++..+..+ ..+.+.+...-++.
T Consensus 232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~ 311 (403)
T PF03209_consen 232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLL 311 (403)
T ss_pred CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 33456779999999999999999999999999998777 788888888888887777665444 46778899999999
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch--------------hhHHHHHHhHHHHHHHH
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--------------NWRILALIGTIPCLVQL 203 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--------------~w~~~~~~~~~~~~~~~ 203 (321)
|++.|.......+.+.++..+++-|..+|.......++..++..+++.+ +|..+|.+.++..++++
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~ 391 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAAL 391 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999888899999999988889999999888877777776666543 46667777776666555
Q ss_pred HHh
Q 020792 204 IGL 206 (321)
Q Consensus 204 ~~~ 206 (321)
.+.
T Consensus 392 ~ll 394 (403)
T PF03209_consen 392 VLL 394 (403)
T ss_pred HHH
Confidence 544
No 227
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=1.1e-06 Score=79.17 Aligned_cols=114 Identities=11% Similarity=0.029 Sum_probs=87.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhh
Q 020792 70 GLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVP 149 (321)
Q Consensus 70 ~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 149 (321)
+.+....+...+.+..+..+|.++++++.||+++|+++.++.++.+++.++..+.++... ..+-++.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 445555566677777888999999999999999999999998888888888887766543 5667788888899999999
Q ss_pred hhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 150 VYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 150 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+...+..+++.+....++.. + .+|..+.|.+.+.+
T Consensus 344 sl~~~~~g~~~~~~s~~l~~-~-~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 344 GIALKGLGQDTKYGAAGLVM-A-IIGGGIVPPLQGFI 378 (410)
T ss_pred HHHHhhhhhhhhhhHHHHHH-H-HhccchHHHHHHHH
Confidence 99999998765433333333 2 27877787777665
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.58 E-value=8.4e-08 Score=82.66 Aligned_cols=153 Identities=17% Similarity=0.095 Sum_probs=117.4
Q ss_pred cccccccchhc-cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhcc--chHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 020792 54 AIGYSSPAQSG-ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIG--RRGTMGFSDIVCIIGWVIIVFSKAAWWL 130 (321)
Q Consensus 54 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 130 (321)
...+.-|.++. +.+++..+..+.|+..--..+.+.++..+.|.++||++ |-.....+.+...+++....+++++..+
T Consensus 285 ~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L 364 (464)
T KOG3764|consen 285 SLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQL 364 (464)
T ss_pred hHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHH
Confidence 33334454443 56677756668898888899999999999999999999 5445556666677777788889999999
Q ss_pred HHHHHHHhhhhhhhcchhhhhhhccCCCcc------chhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHH
Q 020792 131 DLGRLLVGYGMGLLSYVVPVYIAEITPKNL------RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCL 200 (321)
Q Consensus 131 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~ 200 (321)
.+-++..|++.+...........+..+.++ -|...++...++.+|..++|.+++.+ |.+|.-.+.++..+
T Consensus 365 ~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~ 444 (464)
T KOG3764|consen 365 WVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNL 444 (464)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHH
Confidence 999999998888887777777777665443 36778888889999999999999887 77887777777666
Q ss_pred HHHHHh
Q 020792 201 VQLIGL 206 (321)
Q Consensus 201 ~~~~~~ 206 (321)
+...+.
T Consensus 445 iyapvl 450 (464)
T KOG3764|consen 445 IYAPVL 450 (464)
T ss_pred HHHHHH
Confidence 554444
No 229
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.57 E-value=1.2e-07 Score=84.73 Aligned_cols=144 Identities=20% Similarity=0.239 Sum_probs=119.2
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLL 144 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 144 (321)
-.++++-.+...|........+-++.-++.+++..|+|+-+++.+++.+..+=.+..+..+|.|+.+-.-+++|+..+..
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~ali 476 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALI 476 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHH
Confidence 45677767777787788888888899999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhccCCCccchhHHhHHHHH-HHHHHHHHHHhhc----chhhHHHHHHhHHHHHHHHHHhhc
Q 020792 145 SYVVPVYIAEITPKNLRGGFTTVHQLM-ICIGVSMTYLIGA----FLNWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~i~~----~~~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
+....+|++...||+.|.++.++.... .++|-.+|.+|++ .++-|..|.+.++.+++.++....
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888887654 3445445555554 447788888877777766655433
No 230
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.50 E-value=3.6e-06 Score=77.53 Aligned_cols=131 Identities=15% Similarity=0.237 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhccchHH-------HHHHHHHHHHHHHHHH-----Hh-----hhhHHHHHHHHHHh
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIADYIGRRGT-------MGFSDIVCIIGWVIIV-----FS-----KAAWWLDLGRLLVG 138 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~-------l~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~l~G 138 (321)
.+++.++..+..++.+++.+++.||+|+|+. +.+|+++.+++.+..+ +. .+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3556667777788899999999999999973 6677777666654321 21 34677778889999
Q ss_pred hhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch--------------hhHHHHHHhHHHHHHHHH
Q 020792 139 YGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--------------NWRILALIGTIPCLVQLI 204 (321)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--------------~w~~~~~~~~~~~~~~~~ 204 (321)
+|.+...+....++.+..|++.++.++++++....+|..++..+++.. ...+.|...++..++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988888777433 234566666655554444
Q ss_pred Hh
Q 020792 205 GL 206 (321)
Q Consensus 205 ~~ 206 (321)
+.
T Consensus 471 ~~ 472 (489)
T PRK10207 471 VM 472 (489)
T ss_pred HH
Confidence 44
No 231
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.43 E-value=1e-06 Score=58.88 Aligned_cols=60 Identities=22% Similarity=0.341 Sum_probs=51.2
Q ss_pred cccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHH
Q 020792 54 AIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIV 113 (321)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 113 (321)
..+...|++|...++.|++..+.|.+.++..+...++.+++|+++||+++++.++.....
T Consensus 15 ~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 15 ALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 334446777777788999999999999999999999999999999999999987766544
No 232
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.42 E-value=8e-06 Score=62.53 Aligned_cols=112 Identities=17% Similarity=0.150 Sum_probs=88.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhh
Q 020792 71 LSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPV 150 (321)
Q Consensus 71 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 150 (321)
+++..-..-.++......+..++.+.+.+++|.|+.++++.++..+-... -+-++.+.++.+-++.|++.+..++....
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 34444444566777778888889999999999999999999988764443 34567788899999999999999999999
Q ss_pred hhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 151 YIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 151 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
++.+...++.|++..++.-.....+.++|.++.
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999899888877766666666655443
No 233
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.40 E-value=0.00012 Score=66.53 Aligned_cols=123 Identities=7% Similarity=0.071 Sum_probs=88.4
Q ss_pred ccccccCC-----ChhhHHHHHHHHHHHHHHH-HHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-----h-------
Q 020792 64 GITNDLGL-----SVAEYSLFGSILTIGAMIG-AIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-----K------- 125 (321)
Q Consensus 64 ~~~~~~~~-----s~~~~~~~~~~~~~~~~i~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~------- 125 (321)
.+++.+.+ +.+...++-+...+...+. .++.+++++|++|++++-+......+...++++. +
T Consensus 28 ~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~ 107 (472)
T TIGR00769 28 DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTAL 107 (472)
T ss_pred hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHH
Confidence 35666555 4467888888777766666 8899999999999999877766666665555442 0
Q ss_pred -------------------hhHHHHHHHHHHhhhhhhhcc-hhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc
Q 020792 126 -------------------AAWWLDLGRLLVGYGMGLLSY-VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF 185 (321)
Q Consensus 126 -------------------~~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 185 (321)
+.|...+..+...+....... ..+.+++|.++.++-.+..++...+.++|.++++.+..+
T Consensus 108 ~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 108 ADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333333444444344444 678999999999988999999999999999999987766
Q ss_pred h
Q 020792 186 L 186 (321)
Q Consensus 186 ~ 186 (321)
+
T Consensus 188 ~ 188 (472)
T TIGR00769 188 F 188 (472)
T ss_pred H
Confidence 4
No 234
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.38 E-value=1e-05 Score=70.36 Aligned_cols=125 Identities=11% Similarity=0.138 Sum_probs=99.1
Q ss_pred ccchhc-cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 020792 59 SPAQSG-ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLV 137 (321)
Q Consensus 59 ~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 137 (321)
...++. +.+..|.+..+.+...+.+..+.++|.+.+-++..|+...+.+.+..++..+.++..++.++... +.+-++.
T Consensus 256 gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~-~~~l~~i 334 (422)
T COG0738 256 GSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA-LYALFLI 334 (422)
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHHHHH
Confidence 334443 44448999999999999999999999999999999999999999999998888888888888554 3455788
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
|+..+..+|...+...+..| ++ +...+..-....+|+.+.|.+.+++
T Consensus 335 g~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i 381 (422)
T COG0738 335 GLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred HHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHH
Confidence 99999999999999999998 33 3333444444456777777777766
No 235
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.38 E-value=2e-05 Score=68.96 Aligned_cols=105 Identities=22% Similarity=0.266 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHhhhhccchHH-HHHHHHHHHHHHHHHHHhhh--h-HHHHHHHHHHhhhhhhhcchhh
Q 020792 74 AEYSLFGSILTIGAMIGAIMSGKIADYIGRRGT-MGFSDIVCIIGWVIIVFSKA--A-WWLDLGRLLVGYGMGLLSYVVP 149 (321)
Q Consensus 74 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~l~G~~~~~~~~~~~ 149 (321)
+..+...++..+..++.+|+.|.++|+.|+|+. +-+...+..++..+.++.++ + +..++...+..++.........
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 346788899999999999999999999996664 45555666666666666544 4 4455556777888888889999
Q ss_pred hhhhccCCCccchhHHhHHHHHHHHHHHH
Q 020792 150 VYIAEITPKNLRGGFTTVHQLMICIGVSM 178 (321)
Q Consensus 150 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 178 (321)
+++.+..++++-++..+.-.....+|+.+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i 166 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVI 166 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchH
Confidence 99999999877777766655544455433
No 236
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.36 E-value=2.6e-05 Score=70.40 Aligned_cols=133 Identities=11% Similarity=0.212 Sum_probs=81.4
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH-----HhhhhHHHHHHHHHHhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV-----FSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~G~ 139 (321)
+++.+|.+..+.++.......+..++..+.+.+.+|.++++.+.....+..++..+.. ..++++..++..++.++
T Consensus 245 l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~ 324 (413)
T PRK15403 245 LIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAF 324 (413)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 5566799999999998888888888888888876554444443322222223322222 12333345667778888
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---hhHHHHHHhHHH
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIP 198 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~---~w~~~~~~~~~~ 198 (321)
|.+...+......-+- ....+|++.++.+.....+...++...+++ +-...+...+++
T Consensus 325 G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 385 (413)
T PRK15403 325 GIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVV 385 (413)
T ss_pred HHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 8888777776433211 222368888888777766666666666655 334455444443
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.35 E-value=1.5e-05 Score=72.53 Aligned_cols=137 Identities=13% Similarity=0.024 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcc-chHHHHHHHHHHHHHHHHHHHhhh---------------------hHHHHHHH
Q 020792 77 SLFGSILTIGAMIGAIMSGKIADYIG-RRGTMGFSDIVCIIGWVIIVFSKA---------------------AWWLDLGR 134 (321)
Q Consensus 77 ~~~~~~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~ 134 (321)
.+....+.+...+.+++..++.+|+| ||++..++.++.+++.....+.++ .+..++..
T Consensus 308 ~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence 34555666666678888899999999 477778998888888777665432 36677888
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccc--hhHHhHHHHHHHHHHHHHHHhhcch------hhHHHHHHhHHHHHHHHHHh
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLR--GGFTTVHQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~i~~~~------~w~~~~~~~~~~~~~~~~~~ 206 (321)
.+.|+..+..+..=++++++..+++.| |..+|+.|.+..+.+++..+..+.+ +-...+.+.++..+++.+..
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 999999999999999999999996444 9999999999999988877655543 23456677777777776666
Q ss_pred -hcccCCh
Q 020792 207 -CFIPESP 213 (321)
Q Consensus 207 -~~~~e~~ 213 (321)
+.+|+++
T Consensus 468 ~~~~~~~~ 475 (477)
T TIGR01301 468 LILLPRPR 475 (477)
T ss_pred HHhCCCCC
Confidence 4467653
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.23 E-value=1.6e-05 Score=73.91 Aligned_cols=140 Identities=19% Similarity=0.182 Sum_probs=103.9
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhhhccchH-HHHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHhhhhhhhcchhhhh
Q 020792 75 EYSLFGSILTIGAMIGAIMSGKIADYIGRRG-TMGFSDIVCIIGWVIIVF--SKAAWWLDLGRLLVGYGMGLLSYVVPVY 151 (321)
Q Consensus 75 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 151 (321)
..++......++..+++++.|.+..+++|-| .++++.+++.+++-+++. .+|....++.-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 5678888899999999999999998887554 456776666655444443 3455566677888999988877777777
Q ss_pred hhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch---------------------------------------------
Q 020792 152 IAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--------------------------------------------- 186 (321)
Q Consensus 152 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--------------------------------------------- 186 (321)
..-..|+++-+.+.++......+|+.++..+-..+
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~i 509 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAI 509 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhC
Confidence 77777887779999998888888766665433100
Q ss_pred ---------------------hhHHHHHHhHHHHHHHHHHhhcccCChH
Q 020792 187 ---------------------NWRILALIGTIPCLVQLIGLCFIPESPR 214 (321)
Q Consensus 187 ---------------------~w~~~~~~~~~~~~~~~~~~~~~~e~~~ 214 (321)
++|++|+.....+.++++..+++++..+
T Consensus 510 PGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~ 558 (599)
T PF06609_consen 510 PGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDK 558 (599)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 4788899888888888888888876643
No 239
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.21 E-value=0.00014 Score=66.15 Aligned_cols=122 Identities=10% Similarity=0.212 Sum_probs=108.0
Q ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHHhHH-HhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhh
Q 020792 64 GITNDLGLSVAEYSLFGSILTIGAMIGAIMSG-KIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMG 142 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 142 (321)
++...+++++++.+.+.+.......+++.+.. .+...+|-|+++.+|++.-.+...+.+++++.|+++....+.++. .
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-G 345 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-c
Confidence 46778999999999988888888888887776 788899999999999999999999999999999999988888877 4
Q ss_pred hhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 143 LLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
...+...+.++.+.+++++|++.++......+..+++|.+-+.+
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 67888999999999999999999999999999888888766544
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=98.17 E-value=1.4e-05 Score=74.39 Aligned_cols=142 Identities=11% Similarity=0.093 Sum_probs=100.7
Q ss_pred cccccc-CCCh-hhHHH-HHHHHHHHHHHHHHhHHHhhhh---------ccchHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 020792 64 GITNDL-GLSV-AEYSL-FGSILTIGAMIGAIMSGKIADY---------IGRRGTMGFSDIVCIIGWVIIVFSKAAWWLD 131 (321)
Q Consensus 64 ~~~~~~-~~s~-~~~~~-~~~~~~~~~~i~~~~~g~l~dr---------~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 131 (321)
.|.+.+ |.+. ++... +.++..++..+|.+..|.++.. +.|--.+.+..+ +.++.++.++.-....+.
T Consensus 378 qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~ 456 (591)
T PTZ00207 378 FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALP 456 (591)
T ss_pred HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhH
Confidence 355666 6522 32222 7889999999999999988721 222223344444 666666666654446889
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHH-HHhhcch--------------h---hHHHHH
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMT-YLIGAFL--------------N---WRILAL 193 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~i~~~~--------------~---w~~~~~ 193 (321)
+..++.|++.|..+++....++|+|. |+-|+-..+...+..+|+.+- ..+.+.+ | .+.+|+
T Consensus 457 ~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~ 535 (591)
T PTZ00207 457 LPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLA 535 (591)
T ss_pred HHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHH
Confidence 99999999999999999999999999 878888888888888887764 2333322 1 667888
Q ss_pred HhHHHHHHHHHHhh
Q 020792 194 IGTIPCLVQLIGLC 207 (321)
Q Consensus 194 ~~~~~~~~~~~~~~ 207 (321)
+.+.+++++.+...
T Consensus 536 v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 536 FLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888777776653
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.16 E-value=1.1e-05 Score=73.60 Aligned_cols=142 Identities=12% Similarity=-0.004 Sum_probs=89.5
Q ss_pred hhcccccccchhccccc-cCCChhhHHHHHHHHHHHHHHHHHhHHHhhhh----ccchHHHHHHHHHHHHHH-HHHHHhh
Q 020792 52 GSAIGYSSPAQSGITND-LGLSVAEYSLFGSILTIGAMIGAIMSGKIADY----IGRRGTMGFSDIVCIIGW-VIIVFSK 125 (321)
Q Consensus 52 ~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~~~~~~~~~-~~~~~~~ 125 (321)
....+.....+|.+.++ .|+|..+.+.+.+.+.++.+++.++.|+++|| ..+|........+..+.. .......
T Consensus 286 ~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~ 365 (495)
T KOG2533|consen 286 KLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAA 365 (495)
T ss_pred hhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33333344555655555 67999999999999999999999999999999 677777766665555444 4333343
Q ss_pred hhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccc-hhHHhHHHHHHHHHHHHHHHh-hc----chhhHHHHH
Q 020792 126 AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR-GGFTTVHQLMICIGVSMTYLI-GA----FLNWRILAL 193 (321)
Q Consensus 126 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~i-~~----~~~w~~~~~ 193 (321)
+........+..+.+.+...+......++...++.| -...+....+.+.+...+|.+ .+ ...|...|.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~ 439 (495)
T KOG2533|consen 366 VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFY 439 (495)
T ss_pred cchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHH
Confidence 344444444444555666677777888888776665 344444444444444444333 32 225666663
No 242
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.14 E-value=6.5e-05 Score=70.02 Aligned_cols=131 Identities=16% Similarity=0.131 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhH---HHHHHHHHHhhhhhhhcchhhhhhhccCCCc
Q 020792 83 LTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAW---WLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 159 (321)
Q Consensus 83 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 159 (321)
............+.+.|++|||.....+.++..+++++.++..... ...+...+..++.+..+.....+.+|++|+.
T Consensus 359 ~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~ 438 (521)
T KOG0255|consen 359 SGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTV 438 (521)
T ss_pred HHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 3335555666668999999999999999999999999888865443 3455555566666677777899999999999
Q ss_pred cchhHHhHHHHHHHHHHHHHHHhhcchhh--HH-HHHHhHHHHHHHHHHh-hcccCCh
Q 020792 160 LRGGFTTVHQLMICIGVSMTYLIGAFLNW--RI-LALIGTIPCLVQLIGL-CFIPESP 213 (321)
Q Consensus 160 ~r~~~~~~~~~~~~~g~~~~~~i~~~~~w--~~-~~~~~~~~~~~~~~~~-~~~~e~~ 213 (321)
.|..+.+.......+|.+++|.+...... .. .+.+.+....+...+. +++||+.
T Consensus 439 ~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 439 VRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 99999999999999999999988755422 11 1222344444444343 7789983
No 243
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.07 E-value=1.3e-05 Score=70.62 Aligned_cols=151 Identities=15% Similarity=0.261 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh----hccchHHHHHH
Q 020792 35 SAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD----YIGRRGTMGFS 110 (321)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~~l~~~ 110 (321)
++......++....+.+..-.++..| +..+.|++....+.+-...-+...+.+|+.|..+| ||||||.++..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tP----yl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~ 107 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTP----YLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILA 107 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccH----HHHHcCCCcccccccccccccccceecccccccccccccccccccchHHH
Confidence 34444444444445555555544433 55678999888888888888888999999999999 67888766554
Q ss_pred -HHHHHHHHHHHHHhhhh-----------------HHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchh-HHhHHHHH
Q 020792 111 -DIVCIIGWVIIVFSKAA-----------------WWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG-FTTVHQLM 171 (321)
Q Consensus 111 -~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~ 171 (321)
.+...++.++..++.++ ..+++...+.=++.-..+..+-+++.|+....++.+ +++.+...
T Consensus 108 ~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f 187 (498)
T KOG0637|consen 108 GSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFF 187 (498)
T ss_pred hhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHH
Confidence 45566666666654332 223334444445666778888899999997777655 99999999
Q ss_pred HHHHHHHHHHhhcchhhH
Q 020792 172 ICIGVSMTYLIGAFLNWR 189 (321)
Q Consensus 172 ~~~g~~~~~~i~~~~~w~ 189 (321)
..+|..++..++++.+|+
T Consensus 188 ~avGnvLGY~~g~y~~~~ 205 (498)
T KOG0637|consen 188 MAVGNVLGYALGSYLGLY 205 (498)
T ss_pred HHhcceeeeecccccCce
Confidence 999999999999888765
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.94 E-value=0.0025 Score=57.32 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=31.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHH
Q 020792 72 SVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIV 113 (321)
Q Consensus 72 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 113 (321)
+---.+...-.-.+..++.++..|...||..|.++.-.+.+.
T Consensus 36 sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~ 77 (432)
T PF06963_consen 36 SLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVV 77 (432)
T ss_pred CcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHH
Confidence 333445555666677788899999999999999987666544
No 245
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.90 E-value=0.0013 Score=59.27 Aligned_cols=103 Identities=12% Similarity=0.147 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCc
Q 020792 80 GSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 159 (321)
Q Consensus 80 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 159 (321)
.++....+.++.++.+.+.|+.|.|+.+.++..+.........+ .|-+.++++-.+.|+|.+..+.....+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77888888999999999999999999999999888776554444 55677889999999999999999999999999998
Q ss_pred cchhHHhHHHHHHHHHHHHHHHhh
Q 020792 160 LRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 160 ~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
.+.+..++.-.....+.++|..+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhh
Confidence 888888877766666666665444
No 246
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.87 E-value=0.0007 Score=62.14 Aligned_cols=111 Identities=17% Similarity=0.192 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhccc--hH-----HHHHHHHHHHHHHHHHHHh---------hhhHHHHHHHHHHhh
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIADYIGR--RG-----TMGFSDIVCIIGWVIIVFS---------KAAWWLDLGRLLVGY 139 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~dr~Gr--r~-----~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~ 139 (321)
.+|..++..+.-++.+|+.+++-.|.+| |. =+.+|+++.+++.+++.++ .+.+++++..++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5678888888888899998888777743 21 1677778888877666431 245678888999999
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHH-HHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLM-ICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~i~~~~ 186 (321)
|.-...|+..+.+++..|++.||.++|.+... ..+|..++..+++..
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999774 367777766665443
No 247
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.80 E-value=0.00012 Score=63.24 Aligned_cols=121 Identities=12% Similarity=0.185 Sum_probs=106.1
Q ss_pred ccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhcc--chHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh
Q 020792 66 TNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIG--RRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 66 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 143 (321)
...+|+++.|.|-+.+...++..+.+....+..||.. -+-.+..++.+..-..++.+.+.....+.++-.+-.+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 4679999999999999999999999998889999887 77777777777777777778888878888888888888888
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
.-+....++....|..+||..+|+......++-.+||.+++.+
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i 411 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVI 411 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhee
Confidence 8888899999999999999999999999999999999999655
No 248
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.66 E-value=0.0045 Score=55.91 Aligned_cols=109 Identities=16% Similarity=0.319 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhh---hccchHHHHHHHHHHHHHHHHHHH------------------hhhhHHHHHHH
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIAD---YIGRRGTMGFSDIVCIIGWVIIVF------------------SKAAWWLDLGR 134 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~d---r~Grr~~l~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 134 (321)
.+.......+|..+++.+.+.+++ |+||++.+.++.++..+..++... .+++....+..
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 455566667777777777777775 678999999998888887776554 22456777888
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF 185 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 185 (321)
++.|++-+........++.+.+ +++|..+.++.-.-..++..++-.....
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999 4568777777777666666555444443
No 249
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.66 E-value=0.01 Score=53.39 Aligned_cols=122 Identities=15% Similarity=0.132 Sum_probs=84.6
Q ss_pred cccccC---CChhhHHHHHHHHHH-HHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh---------hh-----
Q 020792 65 ITNDLG---LSVAEYSLFGSILTI-GAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS---------KA----- 126 (321)
Q Consensus 65 ~~~~~~---~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~----- 126 (321)
+.+.+. .+++..+++=+...+ +..+..++.+++.+++.|++++-.-+.....+.+++++. ++
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~ 128 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSR 128 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHH
Confidence 445443 345667777777777 778888999999999999999877777777766666640 11
Q ss_pred ------------------hHHHHHHHHHHhhhhhhhcc-hhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 127 ------------------AWWLDLGRLLVGYGMGLLSY-VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 127 ------------------~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
.|...+...+.=+-...... .-+....|.+..++-.+..++++.+.+++..++..+..++
T Consensus 129 ~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 129 DLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222233332222222233 3467788999988889999999999999999888877766
No 250
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.61 E-value=0.026 Score=51.85 Aligned_cols=115 Identities=13% Similarity=0.134 Sum_probs=74.4
Q ss_pred ChhhHHHHHHHHHH-HHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH---------hh----------------
Q 020792 72 SVAEYSLFGSILTI-GAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF---------SK---------------- 125 (321)
Q Consensus 72 s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---------~~---------------- 125 (321)
+++....+-....+ +..+...+..+++||++|.+++-+..........+.++ .+
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 55666666554433 44556777899999999999887766666655555443 01
Q ss_pred ------hhHHHHHHHHHHhhhhhhhcc-hhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 126 ------AAWWLDLGRLLVGYGMGLLSY-VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 126 ------~~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
+.|...+..++.-+-.....+ .-+.+..|.++.++-.+..++...+.++|.++++.+..++
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222222222222222233 3578899999999889999999999999988887666544
No 251
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.59 E-value=0.00072 Score=59.86 Aligned_cols=116 Identities=15% Similarity=0.118 Sum_probs=83.4
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH---HHhhhhHHHHHHHHHHhhhhhhhc
Q 020792 69 LGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII---VFSKAAWWLDLGRLLVGYGMGLLS 145 (321)
Q Consensus 69 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~G~~~~~~~ 145 (321)
+.-..++.-+....+.+|..++.--...+ |+.+-+.+.+--++..+..++. -+.++.|..++.-+..|+..|..|
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHH
Confidence 33345677888888888887776543322 4433333322222222222222 235788888888999999999999
Q ss_pred chhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 146 YVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 146 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
......+.|-.|+++|..+++....+-.+|..++.+++-.+
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888877554
No 252
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.56 E-value=0.0061 Score=53.07 Aligned_cols=136 Identities=14% Similarity=0.105 Sum_probs=86.2
Q ss_pred HHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhh-----hccchHHHHH-HHHHHHHHH
Q 020792 45 VCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIAD-----YIGRRGTMGF-SDIVCIIGW 118 (321)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-----r~Grr~~l~~-~~~~~~~~~ 118 (321)
.+.+...|.-.+... .+|.+.+.-|.|.++.+....++. -..--++|.++.| |+|||+.-++ +..+.+..+
T Consensus 37 l~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~m 113 (510)
T KOG3574|consen 37 LFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFM 113 (510)
T ss_pred HHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHH
Confidence 334444555555555 778888888888887765443321 1234567888999 9999985332 223333333
Q ss_pred HHHHH-----------hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 119 VIIVF-----------SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 119 ~~~~~-----------~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
.+.+. .++...+....++.-+..+.-..+.-.+.-.+..+++.|-+......+...|.+++..+-
T Consensus 114 llLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 114 LLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 33332 223333444556666666666667777788888888889999999888888888776544
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.46 E-value=0.0013 Score=58.62 Aligned_cols=104 Identities=21% Similarity=0.265 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhh---h------hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCcc---chhHHhHHHHHH
Q 020792 105 GTMGFSDIVCIIGWVIIVFSK---A------AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL---RGGFTTVHQLMI 172 (321)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~ 172 (321)
++++++.++.++|.++..++. . .+.++++..+.++|.|+.=+...++.+|.+++++ |......++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567788888888888754431 2 2578888899999999999999999999998763 366778889999
Q ss_pred HHHHHHHHHhhcch----hhHHHHHHhHHHHHHHHHHhhc
Q 020792 173 CIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 173 ~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
++|..+++.+..++ +|.+.|.+.++..+++++..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 99999999888777 7999999988887777766544
No 254
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.44 E-value=0.0013 Score=59.80 Aligned_cols=142 Identities=20% Similarity=0.260 Sum_probs=101.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH----------hhhhHHHHHHHHHHhhh
Q 020792 71 LSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF----------SKAAWWLDLGRLLVGYG 140 (321)
Q Consensus 71 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~G~~ 140 (321)
.++...+.+..+..++..++..+.....-++.-|+++....++.++..+.... .++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 88888999998899999999999988888888899888887777665543221 11222223334555666
Q ss_pred hhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch------------hhHHHHHHhHHHHHHHHHHhhc
Q 020792 141 MGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------------NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~------------~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
.+..+-.....++|+.|+..-|+..++.....++|..++..++..+ +-.+..++..+..++.+.+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 6666777788999999999889999999888888888887777655 1223444555555555555556
Q ss_pred ccCC
Q 020792 209 IPES 212 (321)
Q Consensus 209 ~~e~ 212 (321)
+|+.
T Consensus 412 Lp~~ 415 (433)
T PF03092_consen 412 LPPQ 415 (433)
T ss_pred cCCC
Confidence 7765
No 255
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.43 E-value=0.0058 Score=57.18 Aligned_cols=149 Identities=14% Similarity=0.104 Sum_probs=110.6
Q ss_pred cccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHhhh----------
Q 020792 58 SSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADY-IGRRGTMGFSDIVCIIGWVIIVFSKA---------- 126 (321)
Q Consensus 58 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~---------- 126 (321)
....+.++.++++.+...+.-..+.+.-......+.+++++|- +||-+++.++.++..++.++..+...
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 3556667888888888777778888888888888999999995 58889999998888877654443111
Q ss_pred ---------------hHHHHHHHHHHhhhhhhhcchhhhhhhccCC---Cccc---hhHHhHHHHHHHHHHHHHHHhhcc
Q 020792 127 ---------------AWWLDLGRLLVGYGMGLLSYVVPVYIAEITP---KNLR---GGFTTVHQLMICIGVSMTYLIGAF 185 (321)
Q Consensus 127 ---------------~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~---~~~r---~~~~~~~~~~~~~g~~~~~~i~~~ 185 (321)
...+..+.-+..+|.|+.-+...++-+|-++ ++++ .....+++...++|..++..+..+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 1245556667778999999999999999998 3333 356777788888888877666655
Q ss_pred h----hhHHHHHHhHHHHHHHHHHh
Q 020792 186 L----NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 186 ~----~w~~~~~~~~~~~~~~~~~~ 206 (321)
. +|.+-|.+..+...++.++.
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHHH
Confidence 4 89988888777666655544
No 256
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.35 E-value=0.0072 Score=54.48 Aligned_cols=124 Identities=15% Similarity=0.175 Sum_probs=92.0
Q ss_pred hhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH---hh-------hhHHHH
Q 020792 62 QSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF---SK-------AAWWLD 131 (321)
Q Consensus 62 ~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~-------~~~~~~ 131 (321)
..++. ..|+++..+|..-+...+....+.+...++.+|+|..+.=+++.....++..++.. .+ +...++
T Consensus 282 t~yl~-~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~ 360 (432)
T PF06963_consen 282 TAYLK-SQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLL 360 (432)
T ss_pred HHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Confidence 33444 44999999999999999999999999999999999999888887765555443332 11 223333
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
.+-.+.=+|.=...-...-++.|..|+++||...+.-+...++...+...+.-.+
T Consensus 361 ~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 361 GGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3334444555566777788999999999999999999988888877766655444
No 257
>PRK03612 spermidine synthase; Provisional
Probab=97.33 E-value=0.024 Score=52.74 Aligned_cols=119 Identities=17% Similarity=0.162 Sum_probs=64.3
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHH---HHHHHH-H---Hhhhh-HHHHHHHHH
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCI---IGWVII-V---FSKAA-WWLDLGRLL 136 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~-~---~~~~~-~~~~~~~~l 136 (321)
+.--+|-+..+.+.+.+++.+|..+|+.+++++.++.-++.. .+...+.. ++..+. . +.... ..++...++
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334478888899999999999999999999888744333322 11111111 111111 1 11111 122333455
Q ss_pred HhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF 185 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 185 (321)
.++..|...|....+..+.... +-+...|-.+....+|+++|.++.++
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~~~-~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIRDQ-HLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHHHHHhcccc-chhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 6777777777776666554321 12344455555555555555544443
No 258
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.22 E-value=0.00081 Score=55.61 Aligned_cols=97 Identities=22% Similarity=0.167 Sum_probs=74.1
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVG 138 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 138 (321)
+|+.-++-+.+|....+++.+........++.+.+.|-++||-|||+.-+.-++.++++++ .-.++++-.++++|++-|
T Consensus 57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGG 135 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGG 135 (454)
T ss_pred CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhh
Confidence 4555567788899999998887777777788888899999999999966555555555433 445778888999999999
Q ss_pred hhhhhhcchhhh-hhhccC
Q 020792 139 YGMGLLSYVVPV-YIAEIT 156 (321)
Q Consensus 139 ~~~~~~~~~~~~-~~~~~~ 156 (321)
+..+..+...-+ ++.|.-
T Consensus 136 iaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 136 IATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 998888887755 445554
No 259
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.20 E-value=0.0036 Score=53.72 Aligned_cols=152 Identities=13% Similarity=0.216 Sum_probs=108.9
Q ss_pred hhccc-cccCCChhhHH-HHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 020792 62 QSGIT-NDLGLSVAEYS-LFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 62 ~~~~~-~~~~~s~~~~~-~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 139 (321)
.|++. .+.+++..+.. -+.-+..-.+.+.-.+.=.+.|..--|+++++-.+.......+.-+.++.+.+-+.-+..|.
T Consensus 28 tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~ 107 (433)
T KOG3810|consen 28 TPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGP 107 (433)
T ss_pred chhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcCh
Confidence 33344 34566666542 22333344455555555579999999999999888888888888899999999899999998
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch------hhHHHHHHhHHHHHHHHHHhhcccCCh
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFIPESP 213 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~------~w~~~~~~~~~~~~~~~~~~~~~~e~~ 213 (321)
..+. ..+.++++-+..+++++-++.+....+.-.|-..+..++..+ ++...=.+......++.+..+++|..+
T Consensus 108 ~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 108 ATAA-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHH-HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 8654 677889999999999998888888888777777777666555 334444455555555666667888765
Q ss_pred H
Q 020792 214 R 214 (321)
Q Consensus 214 ~ 214 (321)
+
T Consensus 187 r 187 (433)
T KOG3810|consen 187 R 187 (433)
T ss_pred h
Confidence 4
No 260
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.20 E-value=0.0074 Score=53.61 Aligned_cols=130 Identities=14% Similarity=0.059 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccC
Q 020792 77 SLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEIT 156 (321)
Q Consensus 77 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 156 (321)
+.+.-+..+-..+..+.+.++.+|+.-+.=..+..++.+++.++.+++++.+.-+++-++.+++.|........+.+ .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 34555555566677777888999998665566677788889999999999998889999999998887777777644 55
Q ss_pred CCccchhHHhHHHHHHHHHHHHHHHhhcc---h--hhHHHHHHhHHHHHHHHHHhhc-ccC
Q 020792 157 PKNLRGGFTTVHQLMICIGVSMTYLIGAF---L--NWRILALIGTIPCLVQLIGLCF-IPE 211 (321)
Q Consensus 157 ~~~~r~~~~~~~~~~~~~g~~~~~~i~~~---~--~w~~~~~~~~~~~~~~~~~~~~-~~e 211 (321)
++. ..+.+..|.+.++++|+..-.. . +-|..+.....+.++..+.+++ +|.
T Consensus 141 ~~~----~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 141 GKS----SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Ccc----ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 543 2344444444444444432211 2 4466677666666555544443 443
No 261
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.14 E-value=0.01 Score=53.57 Aligned_cols=132 Identities=17% Similarity=0.230 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhhhccch-------HHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHHHH
Q 020792 75 EYSLFGSILTIGAMIGAIMSGKIADYIGRR-------GTMGFSDIVCIIGWVIIVFS----------KAAWWLDLGRLLV 137 (321)
Q Consensus 75 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~ 137 (321)
..++..++..+.-++.+|+..++..|.+++ .=+-+++.+.+.+.++.... .+.++++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 346788888899999999999998886554 12455555555555544432 3467888999999
Q ss_pred hhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcc-------h---hhHHHHHHhHHHHHHHHHHh
Q 020792 138 GYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF-------L---NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~-------~---~w~~~~~~~~~~~~~~~~~~ 206 (321)
++|.=...|...+++....|++-.+.+++.+......|..++..++.. . .....|+..+...++..+..
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999888999999999999998888777762 1 34456666666655555443
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.95 E-value=0.033 Score=50.44 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=75.9
Q ss_pred HHHHHHHhhcccccccchhccccc--cCCChhhHHHHHH---HHHHHHHHHHHhHHHhhhhccchHHHHHHH-HHHHHHH
Q 020792 45 VCGSYVFGSAIGYSSPAQSGITND--LGLSVAEYSLFGS---ILTIGAMIGAIMSGKIADYIGRRGTMGFSD-IVCIIGW 118 (321)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~---~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~-~~~~~~~ 118 (321)
.+.++..|.-.+......|.+.++ .+.|.+|.+.... .+.+=..-..++=...+.|+|||+.-++-. .+.++..
T Consensus 6 ~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m 85 (544)
T PF13000_consen 6 VLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILM 85 (544)
T ss_pred HHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHH
Confidence 444555666666554567777777 7888888765421 112111112222233445999998654332 2222222
Q ss_pred HHHHHhh----------------------h--hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHH
Q 020792 119 VIIVFSK----------------------A--AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICI 174 (321)
Q Consensus 119 ~~~~~~~----------------------~--~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 174 (321)
+..+..- + ...+....+++-+-.+.-..++-.+.-.+..+++++.+......|.+.
T Consensus 86 ~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~ 165 (544)
T PF13000_consen 86 LYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTA 165 (544)
T ss_pred HHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhh
Confidence 2222111 0 112233333444444444555556667777888899999998888888
Q ss_pred HHHHHHHhh
Q 020792 175 GVSMTYLIG 183 (321)
Q Consensus 175 g~~~~~~i~ 183 (321)
|..++..+-
T Consensus 166 Gyfls~tvF 174 (544)
T PF13000_consen 166 GYFLSFTVF 174 (544)
T ss_pred hHHHHHHHH
Confidence 887776443
No 263
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.89 E-value=0.00075 Score=61.09 Aligned_cols=75 Identities=21% Similarity=0.334 Sum_probs=58.9
Q ss_pred HHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHH-HHHHHHHHHHHH
Q 020792 49 YVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSD-IVCIIGWVIIVF 123 (321)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~-~~~~~~~~~~~~ 123 (321)
+..+...+.+.|.++.+.+++|+++.+.|.+++.--+..+++.|++|+++||+.+|+.++++. +......++..+
T Consensus 21 ~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~f 96 (618)
T KOG3762|consen 21 LFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVF 96 (618)
T ss_pred eeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheee
Confidence 334445555677778888999999999999999999999999999999999999777666654 445555555544
No 264
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.37 E-value=0.0054 Score=55.62 Aligned_cols=69 Identities=14% Similarity=0.116 Sum_probs=50.7
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHHHH
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQL 203 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~~~ 203 (321)
++.|.+.-.......+.-+|...|++++.+.+++.....++..++|++.... |.|+++.+.+...++..
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVA 468 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHH
Confidence 3446665555666778889999999999999999999888888888877655 66766665554444333
No 265
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.34 E-value=0.015 Score=51.89 Aligned_cols=104 Identities=16% Similarity=0.084 Sum_probs=69.0
Q ss_pred ccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccch-HHHHHHHHHHHHHHHH-HHHh---hhhHHHHHHHHHHhhh
Q 020792 66 TNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRR-GTMGFSDIVCIIGWVI-IVFS---KAAWWLDLGRLLVGYG 140 (321)
Q Consensus 66 ~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr-~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~l~G~~ 140 (321)
...-|++....|++..+..++..+++.+.|.+.||...- ...++......++... .... ...+.++..-.+.|++
T Consensus 293 l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~ 372 (480)
T KOG2563|consen 293 LCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFF 372 (480)
T ss_pred cccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHh
Confidence 344566778899999999999999999999999998743 3444444444444222 1111 2234455556777888
Q ss_pred hhhhcchhhhhhhcc-CCCccchhHHhHHHH
Q 020792 141 MGLLSYVVPVYIAEI-TPKNLRGGFTTVHQL 170 (321)
Q Consensus 141 ~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~ 170 (321)
..+.+|...-+-.|. +|..++ +..|+.+.
T Consensus 373 ~~~~~Pig~ElgvE~TyPv~E~-tSsGll~~ 402 (480)
T KOG2563|consen 373 GTGYLPIGFELGVETTYPVAEG-TSSGLLNL 402 (480)
T ss_pred hcCCCCcceeeeeeeccccCCc-ccceeEEe
Confidence 788889888888886 565554 44444433
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.21 E-value=0.18 Score=45.89 Aligned_cols=106 Identities=9% Similarity=0.166 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccch-HHHHHHHH---HHHHHHHHHHHh---------hhhHHHHHHHHHHhhhhhh
Q 020792 77 SLFGSILTIGAMIGAIMSGKIADYIGRR-GTMGFSDI---VCIIGWVIIVFS---------KAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 77 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr-~~l~~~~~---~~~~~~~~~~~~---------~~~~~~~~~~~l~G~~~~~ 143 (321)
-....+++++-.+|..+..+.. .-++| +.+.+..+ +.....+++... ++.+..++.-++.|+..|.
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 3556777888888877554321 11222 12222222 233333333322 3556677778999999999
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
..+....+..+..++++|..+..+...+..+|..+|..++
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888888888888877766543
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.18 E-value=0.12 Score=46.93 Aligned_cols=78 Identities=8% Similarity=-0.007 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH-H-------hhhhHHHHHHHHHHhhhhhhhcchhhhhh
Q 020792 81 SILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV-F-------SKAAWWLDLGRLLVGYGMGLLSYVVPVYI 152 (321)
Q Consensus 81 ~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 152 (321)
-...+...+..+..-.+..|+..|.=+..++++..+..++.. + ...++..++.-++.|++.+.......++.
T Consensus 52 ~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla 131 (437)
T TIGR00939 52 LASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLA 131 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhc
Confidence 344444445555555566666643223333332222222211 1 12455666677788888888888777776
Q ss_pred hccCCCc
Q 020792 153 AEITPKN 159 (321)
Q Consensus 153 ~~~~~~~ 159 (321)
+ .+|++
T Consensus 132 ~-~fp~~ 137 (437)
T TIGR00939 132 G-VFPST 137 (437)
T ss_pred c-cCCHH
Confidence 6 55654
No 268
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.07 E-value=0.0055 Score=54.70 Aligned_cols=122 Identities=16% Similarity=0.196 Sum_probs=68.2
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccc-------hHHHHHHHHHHHHH----HHHHHH-hhhhHHHHH
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGR-------RGTMGFSDIVCIIG----WVIIVF-SKAAWWLDL 132 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~----~~~~~~-~~~~~~~~~ 132 (321)
..+-.|.+..+.-++..+...+..+|.+++|.++||+.| .+.=.+.+.+.+.. .++... ..+...+..
T Consensus 274 ~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~ 353 (493)
T KOG1330|consen 274 SYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGL 353 (493)
T ss_pred HHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHH
Confidence 334445566666778889999999999999999999432 22211111111111 111111 222222333
Q ss_pred HHHHHhhhhh-hhcchhhhhhhccCCCccchhHHhHHHHHHH-HHHHHHHHhhcch
Q 020792 133 GRLLVGYGMG-LLSYVVPVYIAEITPKNLRGGFTTVHQLMIC-IGVSMTYLIGAFL 186 (321)
Q Consensus 133 ~~~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~i~~~~ 186 (321)
..++.|...- ..+....-+..|..|+++|..+.++...... +|..-+|.+.+.+
T Consensus 354 il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGil 409 (493)
T KOG1330|consen 354 ILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGIL 409 (493)
T ss_pred HHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhH
Confidence 3444443322 2344445677888899999999988776543 4554455344443
No 269
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.50 E-value=0.0037 Score=58.31 Aligned_cols=76 Identities=22% Similarity=0.355 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhcccccccchh-ccccccCCChhhHHHHHHHHHH-HHHHHHHhHHHhhhhcc--chHHHHHHHHHHHHH
Q 020792 42 FVAVCGSYVFGSAIGYSSPAQS-GITNDLGLSVAEYSLFGSILTI-GAMIGAIMSGKIADYIG--RRGTMGFSDIVCIIG 117 (321)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~ 117 (321)
++..++..........+..+.| +++.+|++++++++++.++..+ +.++|.+++|++..|+. .|..+.+..+...++
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~ 387 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVS 387 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHH
Confidence 3334444444444444445555 6788999999999988766655 67788899999999885 445554444444443
No 270
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.35 E-value=0.046 Score=52.32 Aligned_cols=57 Identities=18% Similarity=0.328 Sum_probs=45.1
Q ss_pred ccccccCCChhhHHHHHHHHHH-HHHHHHHhHHHhhhhcc--chHHHHHHHHHHHHHHHH
Q 020792 64 GITNDLGLSVAEYSLFGSILTI-GAMIGAIMSGKIADYIG--RRGTMGFSDIVCIIGWVI 120 (321)
Q Consensus 64 ~~~~~~~~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~ 120 (321)
++++.+|+++.+++++.++..+ +.+++.+++|+++||++ .|+.+.+++++..++.++
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 5667899999999999888776 67899999999999998 456666666666665443
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.97 E-value=0.87 Score=40.58 Aligned_cols=34 Identities=6% Similarity=-0.089 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCcc
Q 020792 126 AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL 160 (321)
Q Consensus 126 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 160 (321)
.++..++.-.+.+++.|..+.......+++ |+|.
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~y 149 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEY 149 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHH
Confidence 345566667777888877777777766655 4443
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.24 E-value=0.82 Score=40.73 Aligned_cols=107 Identities=11% Similarity=0.170 Sum_probs=71.2
Q ss_pred hhHHHHHHH-HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH---------HhhhhHHHHHHHHHHhhhhhh
Q 020792 74 AEYSLFGSI-LTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV---------FSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 74 ~~~~~~~~~-~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~G~~~~~ 143 (321)
.-.-++..+ +++.-.+|.+...++-++= +|.+.+..++=.+..-++. +-.+.+++++...+.|+..|-
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~~--~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWPD--PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCCC--CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 334455566 8888899977777765433 3333333333222222222 245667788889999999999
Q ss_pred hcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHh
Q 020792 144 LSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLI 182 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i 182 (321)
...+...+..+-.|++++-.+..+.......|...|..+
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999988777777776666666555443
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.21 E-value=1.1 Score=40.27 Aligned_cols=97 Identities=12% Similarity=0.136 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHH--HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhh
Q 020792 75 EYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFS--DIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYI 152 (321)
Q Consensus 75 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 152 (321)
--|.+-.+..+.++++.+..|++..++.+-.-+.++ .++.+.+.++++..+|.|...++.++.+.......+.+..-+
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qI 365 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQI 365 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347788888888899999999998888775544444 444555667788889999999998888877777777777666
Q ss_pred hccCCCccchhHHhHHHHH
Q 020792 153 AEITPKNLRGGFTTVHQLM 171 (321)
Q Consensus 153 ~~~~~~~~r~~~~~~~~~~ 171 (321)
+.....+.-+...|+....
T Consensus 366 A~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 366 AKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHhccccceeeeeeeHHHH
Confidence 6666654336666655443
No 274
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=93.32 E-value=0.93 Score=39.10 Aligned_cols=73 Identities=12% Similarity=0.122 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccC
Q 020792 83 LTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEIT 156 (321)
Q Consensus 83 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 156 (321)
..+..+..+++.+.+..++|-|+++.++......... .-+-+.+..++-+..+.|++.+..+..--+|++++-
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 3444556666677899999999999887766554322 122355677888889999999988888777776654
No 275
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=91.56 E-value=0.054 Score=46.91 Aligned_cols=105 Identities=16% Similarity=0.201 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHH--HHHHHHHHHHH----------HhhhhHHHHHHHHHHhhhhhhhc
Q 020792 79 FGSILTIGAMIGAIMSGKIADY-IGRRGTMGFSD--IVCIIGWVIIV----------FSKAAWWLDLGRLLVGYGMGLLS 145 (321)
Q Consensus 79 ~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~--~~~~~~~~~~~----------~~~~~~~~~~~~~l~G~~~~~~~ 145 (321)
....++++-.+|..+.++.-=+ -.+|++...+. ++.....+++. +.++.+..++.-++.|+..|...
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567888888888877764211 12444433221 22222222221 22355667777889999999999
Q ss_pred chhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 146 YVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 146 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
+....+..+..++++|..+..+......+|-.+|..++
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998887777777777766665544
No 276
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=88.21 E-value=13 Score=32.76 Aligned_cols=142 Identities=15% Similarity=0.085 Sum_probs=77.6
Q ss_pred chHHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH----H
Q 020792 33 ATSAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTM----G 108 (321)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l----~ 108 (321)
+++.....++++..+...+-+.......+ + .|-+..|.+.+.+.+.....+|+...-++.|---.-+.+ +
T Consensus 8 ~~alL~laVf~~aa~GlvyElal~tLaty---L---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vEll 81 (508)
T COG4262 8 WRALLLLAVFVCAACGLVYELALGTLATY---L---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELL 81 (508)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH---h---cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHH
Confidence 33444444444445555554443222221 1 455667889999999999999998887776643332222 2
Q ss_pred HHHHHHHHHHHHH-HH----hhhhHHHHHHHHHHhhhhhhhcchhhhhhhc-cCCCccc-hhHHhHHHHHHHHHHHHHH
Q 020792 109 FSDIVCIIGWVII-VF----SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAE-ITPKNLR-GGFTTVHQLMICIGVSMTY 180 (321)
Q Consensus 109 ~~~~~~~~~~~~~-~~----~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~-~~~~~~r-~~~~~~~~~~~~~g~~~~~ 180 (321)
+|++..+-...+. .| .++-+.+.++.++.|.-.|...|..+.++.. ....+.- .+....-+.+...|+..-|
T Consensus 82 lgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~r~a~~k~~~s~vl~~DYLGal~~gLl~p 160 (508)
T COG4262 82 LGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQRRQAKAKDLGSRVLTLDYLGALAGGLLWP 160 (508)
T ss_pred HHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhhhhhhhhhHhhhhhhHHHHHH
Confidence 2222211111111 22 2455778888899998889988988887766 2222221 2333334445444544444
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=87.75 E-value=0.6 Score=38.85 Aligned_cols=51 Identities=16% Similarity=0.210 Sum_probs=35.4
Q ss_pred ccchhHHhHHHHHHHHHHHHH--HHhhc-c----h--hhHHHHHHhHHHHHHHHHHhhcc
Q 020792 159 NLRGGFTTVHQLMICIGVSMT--YLIGA-F----L--NWRILALIGTIPCLVQLIGLCFI 209 (321)
Q Consensus 159 ~~r~~~~~~~~~~~~~g~~~~--~~i~~-~----~--~w~~~~~~~~~~~~~~~~~~~~~ 209 (321)
|+|+..+.+...+.++|.++. |++.. - . +|++++.+.+.+.++-++.+..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456777777778888887654 43333 1 1 79999998888887777766544
No 278
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.03 E-value=3.8 Score=28.82 Aligned_cols=32 Identities=16% Similarity=-0.065 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHH
Q 020792 78 LFGSILTIGAMIGAIMSGKIADYI-GRRGTMGF 109 (321)
Q Consensus 78 ~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~ 109 (321)
+-.+.-+++..+.....|||.||| |.++..++
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 344556667777778889999987 55554443
No 279
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=85.46 E-value=9.4 Score=35.26 Aligned_cols=96 Identities=14% Similarity=0.047 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccch--HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhc
Q 020792 77 SLFGSILTIGAMIGAIMSGKIADYIGRR--GTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAE 154 (321)
Q Consensus 77 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 154 (321)
|..-.+..+..++..+..|++-.++.+- ..+.+..++.+...++++..+|.|...++.++.+.......+++..-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777788889999997777553 33444445555566778889999999999999999888888888888888
Q ss_pred cCCCccchhHHhHHHHHH
Q 020792 155 ITPKNLRGGFTTVHQLMI 172 (321)
Q Consensus 155 ~~~~~~r~~~~~~~~~~~ 172 (321)
....+.-|...|+.+...
T Consensus 381 ~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 381 SLSKELCALVFGINTFVA 398 (511)
T ss_pred HhcccceEEEEecHHHHH
Confidence 887665588888776553
No 280
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=83.82 E-value=9.2 Score=27.57 Aligned_cols=43 Identities=21% Similarity=0.536 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHH
Q 020792 75 EYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIG 117 (321)
Q Consensus 75 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 117 (321)
..+.......++..++..+.+.+.|..|.+..+.+......++
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 3556677777888888888888888888777666555444443
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=82.55 E-value=0.85 Score=43.83 Aligned_cols=78 Identities=17% Similarity=0.237 Sum_probs=49.2
Q ss_pred HHHHHHHHHhhcccccccchh-ccccccCCChhhHHHHHHHH-HHHHHHHHHhHHHhhhhcc--chHHHHHHHHHHHHHH
Q 020792 43 VAVCGSYVFGSAIGYSSPAQS-GITNDLGLSVAEYSLFGSIL-TIGAMIGAIMSGKIADYIG--RRGTMGFSDIVCIIGW 118 (321)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~-~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~ 118 (321)
+..++..+.......+..++| +++.+||.+.+.+..+++.. .-+.++|.+++|++..|+- .|....+.++...++.
T Consensus 396 ~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 396 LVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 333444444444444445555 67888999999999887544 4556678888999999774 5555555555444444
Q ss_pred HH
Q 020792 119 VI 120 (321)
Q Consensus 119 ~~ 120 (321)
+.
T Consensus 476 ~~ 477 (735)
T KOG3626|consen 476 LF 477 (735)
T ss_pred HH
Confidence 33
No 282
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=81.72 E-value=5.8 Score=34.18 Aligned_cols=115 Identities=15% Similarity=0.135 Sum_probs=76.4
Q ss_pred cccCCChh-hHHHHHHHHHHHHHHHHHhHHHhhhhccchH---HHHH---HHHHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 020792 67 NDLGLSVA-EYSLFGSILTIGAMIGAIMSGKIADYIGRRG---TMGF---SDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 67 ~~~~~s~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~---~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 139 (321)
+.+..+.+ |.-|....+.+|..+..- +-|+=+-+ .+.+ -.++..+.-.+..+.++++..++.-+.-|+
T Consensus 280 ~g~sls~~sqYRwyqvlYQlGVFiSRS-----S~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGL 354 (409)
T KOG3880|consen 280 HGFSLSKDSQYRWYQVLYQLGVFISRS-----SINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGL 354 (409)
T ss_pred cCCccchhhcchhhheeeeeeEEEEec-----cceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 33444433 467888888777554422 22222222 1111 122233333455668899988888899998
Q ss_pred hhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 140 GMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
-.|..|....--+.+-.++++|-.+++....+-.+|..++..++-.+
T Consensus 355 lGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 355 LGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred cCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 88888888887788878888999999999999889988887776443
No 283
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=80.76 E-value=24 Score=29.98 Aligned_cols=130 Identities=14% Similarity=0.093 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhccch--HHHHHHHHHHHHHHHHHHH----hh---hhHHHHHHHHHHhhhhhhhcc
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIADYIGRR--GTMGFSDIVCIIGWVIIVF----SK---AAWWLDLGRLLVGYGMGLLSY 146 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~l~G~~~~~~~~ 146 (321)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..++.++...+... ++ +...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 47788888899999998888888776655 3444444443333322222 11 112224444555566778899
Q ss_pred hhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh----cchhhHHHHHHhHHHHHHHHHH
Q 020792 147 VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG----AFLNWRILALIGTIPCLVQLIG 205 (321)
Q Consensus 147 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~----~~~~w~~~~~~~~~~~~~~~~~ 205 (321)
...-+-++..|.+.|.+.+.++..-.++-.-++-..- --.+-|..|-++.+...++.+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 9999999999999998888777655443332221110 1115667777777666655444
No 284
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=80.73 E-value=33 Score=28.84 Aligned_cols=100 Identities=13% Similarity=0.164 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhh-hccchHHHH----HHHHHHHHHHHHHHH-h----hhhHHHHHHHHHHhhhhhhhc
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIAD-YIGRRGTMG----FSDIVCIIGWVIIVF-S----KAAWWLDLGRLLVGYGMGLLS 145 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~G~~~~~~~ 145 (321)
......++..|..+|.+..|.... ++-||+.+. .+.+..++..++.+. . .+...+.+..++.|++.=+.+
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 345566677777777777787776 344555443 233444444433212 1 134567777788887655555
Q ss_pred chhhhhhhccCCCccchhHHhHHHHHHHHHH
Q 020792 146 YVVPVYIAEITPKNLRGGFTTVHQLMICIGV 176 (321)
Q Consensus 146 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 176 (321)
++....-.|. +...+-+..-.+...+++|-
T Consensus 223 ~ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY 252 (267)
T PF07672_consen 223 GVILNLPHEY-KGYNPKKIGIQFGLIWGFGY 252 (267)
T ss_pred HHHhcChhhh-cCCCcceehhHHHHHHHHHH
Confidence 5554444443 22223333444444555554
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=79.49 E-value=5.1 Score=34.50 Aligned_cols=132 Identities=11% Similarity=0.033 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhcc
Q 020792 76 YSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEI 155 (321)
Q Consensus 76 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 155 (321)
.|.+.-.-.+-..+..+.+..+.||+---.=..+..++.+.+.++.+++++.++-+++-.+..++.|.......++. ..
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-cc
Confidence 34455555555666777777888877533334455667777888889999999988888888888877655544443 33
Q ss_pred CCCccchhHHhHHHHHHHHHHHHHHHhhcch--hhHHHHHHhHHHHHHHHHHhhc
Q 020792 156 TPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--NWRILALIGTIPCLVQLIGLCF 208 (321)
Q Consensus 156 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~--~w~~~~~~~~~~~~~~~~~~~~ 208 (321)
+|+..-....+-...+..+|+.-=..+..+. +-|...++...+.++....+++
T Consensus 143 Y~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 143 YPSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred CCCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh
Confidence 4433322222222222333332222333323 5666666666655555444443
No 286
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=79.03 E-value=4.3 Score=36.89 Aligned_cols=70 Identities=13% Similarity=-0.089 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Q 020792 77 SLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSY 146 (321)
Q Consensus 77 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 146 (321)
.|-+.++.+...+.+...-++.||+|-|+.+..+.....++..+.+...+.+.....+-..|+-.+....
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~ 404 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLT 404 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhc
Confidence 4567788888889999999999999977777777666667666666666666666666666644444333
No 287
>COG1422 Predicted membrane protein [Function unknown]
Probab=77.83 E-value=33 Score=27.33 Aligned_cols=23 Identities=17% Similarity=0.353 Sum_probs=10.6
Q ss_pred HHHHHHHHhhcchhhHHHHHHhHH
Q 020792 174 IGVSMTYLIGAFLNWRILALIGTI 197 (321)
Q Consensus 174 ~g~~~~~~i~~~~~w~~~~~~~~~ 197 (321)
+...++|.++. .+..++.++.++
T Consensus 33 ln~~f~P~i~~-~~p~lvilV~av 55 (201)
T COG1422 33 LNVVFGPLLSP-LPPHLVILVAAV 55 (201)
T ss_pred HHHHHhhhccc-cccHHHHHHHHH
Confidence 34455565555 333344444333
No 288
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=74.09 E-value=9.8 Score=33.48 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchH--HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhc
Q 020792 77 SLFGSILTIGAMIGAIMSGKIADYIGRRG--TMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAE 154 (321)
Q Consensus 77 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 154 (321)
|..-.+..+.++++.+..|.+.-++.|.. .+.++.+..+.+.++++.++++|...++.++.+.......+++..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 45566777788889999999988887764 4455556666667778888999999999888888777878888888888
Q ss_pred cCCCccchhHHhHHHHH
Q 020792 155 ITPKNLRGGFTTVHQLM 171 (321)
Q Consensus 155 ~~~~~~r~~~~~~~~~~ 171 (321)
....+.-|...|+....
T Consensus 354 nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV 370 (433)
T ss_pred hhhhhhheeeeehHHHH
Confidence 88776558777776654
No 289
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=73.68 E-value=46 Score=26.80 Aligned_cols=25 Identities=20% Similarity=0.129 Sum_probs=14.2
Q ss_pred HHhHHHHHHHHHHHHHHHhhcchhh
Q 020792 164 FTTVHQLMICIGVSMTYLIGAFLNW 188 (321)
Q Consensus 164 ~~~~~~~~~~~g~~~~~~i~~~~~w 188 (321)
.....-.+..+|.+++..+....+.
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444445555666666666666664
No 290
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=73.28 E-value=22 Score=29.79 Aligned_cols=16 Identities=13% Similarity=0.102 Sum_probs=9.9
Q ss_pred hhhHHHcHHHHHhhcC
Q 020792 288 VNGIAFYASSIFISAG 303 (321)
Q Consensus 288 ~~~~~~~~~~~~~~~g 303 (321)
+++.++....|.++..
T Consensus 194 lyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 194 LYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHhcccchHHHHHhCc
Confidence 4566666666776654
No 291
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=72.45 E-value=28 Score=26.52 Aligned_cols=50 Identities=10% Similarity=-0.009 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHH
Q 020792 127 AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMT 179 (321)
Q Consensus 127 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 179 (321)
+..++....+.|+|. ..+.+.+++--.++++-|...|+-+.-.+++-+.-
T Consensus 97 ~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred hHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 334444444444332 34455666777787777999999988888776543
No 292
>PF12832 MFS_1_like: MFS_1 like family
Probab=70.20 E-value=9.5 Score=25.23 Aligned_cols=34 Identities=15% Similarity=0.078 Sum_probs=27.3
Q ss_pred hChhhHHHcHHHHHhhcCCCCchHHHHHHHHHHh
Q 020792 286 GGVNGIAFYASSIFISAGFSGSIGMIAMVVIQVI 319 (321)
Q Consensus 286 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~i~ 319 (321)
+....+.-|.|.++++.|+|+.+.+.+.++..++
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~ 47 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLI 47 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHH
Confidence 3456788889999999999999888888776553
No 293
>PRK10263 DNA translocase FtsK; Provisional
Probab=69.58 E-value=59 Score=33.99 Aligned_cols=24 Identities=13% Similarity=0.004 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhhcchhhHHHHHH
Q 020792 171 MICIGVSMTYLIGAFLNWRILALI 194 (321)
Q Consensus 171 ~~~~g~~~~~~i~~~~~w~~~~~~ 194 (321)
|..+|..++.++..++|.....++
T Consensus 143 GGIIG~lLs~lL~~LfG~vGa~LI 166 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLHSSGGTIA 166 (1355)
T ss_pred cchHHHHHHHHHHHHHhHHHHHHH
Confidence 444555555555555544433333
No 294
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=68.99 E-value=59 Score=30.30 Aligned_cols=47 Identities=13% Similarity=0.240 Sum_probs=39.0
Q ss_pred HHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHH
Q 020792 130 LDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGV 176 (321)
Q Consensus 130 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 176 (321)
+++.-++..+..-..+....++-+...+|..-|+.|.+.+...++|+
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 33445666677777888889999999999999999999999999887
No 295
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=68.52 E-value=1.6e+02 Score=30.85 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhhcch-hhHHHHHHhHHHHHHHHHHh
Q 020792 171 MICIGVSMTYLIGAFL-NWRILALIGTIPCLVQLIGL 206 (321)
Q Consensus 171 ~~~~g~~~~~~i~~~~-~w~~~~~~~~~~~~~~~~~~ 206 (321)
..++..++..++.++. +||......+...++.+...
T Consensus 790 v~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~ 826 (1228)
T KOG0055|consen 790 VQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGY 826 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444 99998888877776665544
No 296
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=68.24 E-value=1e+02 Score=28.60 Aligned_cols=66 Identities=17% Similarity=0.195 Sum_probs=40.8
Q ss_pred HHhhhhhhhcchhhhhhhccCCC-ccchhHHhHHHHHHHHHHHHHHHhhcch----hhHHHHHHhHHHHHH
Q 020792 136 LVGYGMGLLSYVVPVYIAEITPK-NLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLV 201 (321)
Q Consensus 136 l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~~----~w~~~~~~~~~~~~~ 201 (321)
+.|+.....+..--..+.|.+|. ++|+..++-.....++..++..++++.+ ||.....+.-++.++
T Consensus 275 ~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 275 AYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34555555555556777888774 4567777777777666665444444333 888776665555444
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=67.14 E-value=1.8 Score=37.45 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=0.0
Q ss_pred HHHhhhhhhhcchhhhhhhccCCCcc
Q 020792 135 LLVGYGMGLLSYVVPVYIAEITPKNL 160 (321)
Q Consensus 135 ~l~G~~~~~~~~~~~~~~~~~~~~~~ 160 (321)
++.|++.+..+....++.+. +|++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y 29 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY 29 (309)
T ss_dssp --------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH
Confidence 44566666666667666665 55544
No 298
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=66.10 E-value=31 Score=22.82 Aligned_cols=63 Identities=14% Similarity=0.022 Sum_probs=29.4
Q ss_pred hhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCc
Q 020792 97 IADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 159 (321)
Q Consensus 97 l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 159 (321)
++++.-+.-+.+.+.+.++++.+...+........++-++.-+...+.++...---.+|.+++
T Consensus 8 ~ae~l~~~il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv~vP~Wp~y~r~p~~W~~~~ 70 (76)
T PF06645_consen 8 LAEKLMQYILIISAIISFIVGYITQSFSYTFYIYGAGVVLTLLVVVPPWPFYNRHPLKWLPPK 70 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeCCcHhhcCCcccCCCCC
Confidence 344443444444444444444444444444444444444444444555555444444455444
No 299
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=62.90 E-value=35 Score=26.97 Aligned_cols=24 Identities=29% Similarity=0.407 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhHHHhhhhccc
Q 020792 80 GSILTIGAMIGAIMSGKIADYIGR 103 (321)
Q Consensus 80 ~~~~~~~~~i~~~~~g~l~dr~Gr 103 (321)
+.-+.+++.+...+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 345778889999999999999986
No 300
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=59.29 E-value=46 Score=25.30 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHhHHHhhhhccchH
Q 020792 80 GSILTIGAMIGAIMSGKIADYIGRRG 105 (321)
Q Consensus 80 ~~~~~~~~~i~~~~~g~l~dr~Grr~ 105 (321)
+.-+.+++.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45677888899999999999988763
No 301
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=58.13 E-value=21 Score=25.20 Aligned_cols=48 Identities=15% Similarity=0.206 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 020792 74 AEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII 121 (321)
Q Consensus 74 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 121 (321)
...|-...++.-.+++.++++++..|+.-+-+.=.+|..+..++..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 456778888999999999999999999987776666666666555443
No 302
>PRK02237 hypothetical protein; Provisional
Probab=57.14 E-value=33 Score=24.33 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 020792 74 AEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVII 121 (321)
Q Consensus 74 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 121 (321)
+..|-...++.-.+++.++++++..|+.-+-+.=.+|..+..++..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 347788899999999999999999999987776666666666655443
No 303
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=51.23 E-value=19 Score=31.46 Aligned_cols=71 Identities=18% Similarity=0.393 Sum_probs=48.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHhhhhh
Q 020792 72 SVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF----SKAAWWLDLGRLLVGYGMG 142 (321)
Q Consensus 72 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~G~~~~ 142 (321)
..+..+..+..+.++.++.+.+.|.|..++||-+.+..+.+.-..-....-+ ..+.+.+.+.-.+.|.+-+
T Consensus 308 Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~~~~w~~~~~~~~i~y~~aalwgv~d~ 382 (390)
T KOG3097|consen 308 GVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITILFFWAPNPQDSWIFYVAAALWGVGDA 382 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhcccCCCCceEEEeehhhcCccHH
Confidence 3456788899999999999999999999999999988887665443332222 1233444444444554443
No 304
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=48.85 E-value=82 Score=21.33 Aligned_cols=65 Identities=15% Similarity=0.138 Sum_probs=33.5
Q ss_pred hhhhhhhcchhhhhhhcc-CCCccchhHHhHHHHHHHHHHHHHHHhhcchhhHHHHHHhHHHHHHH
Q 020792 138 GYGMGLLSYVVPVYIAEI-TPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTIPCLVQ 202 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~~w~~~~~~~~~~~~~~ 202 (321)
|++--...|..|.++.|. +...+-+...+..+.+.-+|...+..+......+..+....+...+.
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLS 70 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 444444566677777775 34443455555556666666655555444333334444433333333
No 305
>COG4769 Predicted membrane protein [Function unknown]
Probab=47.43 E-value=41 Score=25.92 Aligned_cols=51 Identities=14% Similarity=-0.032 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 020792 83 LTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 139 (321)
Q Consensus 83 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 139 (321)
+.+...+.+...-++..++|+|.+-+++.- ..-++.+|..++++++++.+-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 344445555566677778887775433322 233566788888888777663
No 306
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=47.06 E-value=1.6e+02 Score=24.66 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=24.5
Q ss_pred hhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHH
Q 020792 124 SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTY 180 (321)
Q Consensus 124 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 180 (321)
+.|..-...+.+..|+... .....-..+...| +|.....+...++.+|..+-.
T Consensus 31 S~s~~FyY~sg~~lGv~~s--~li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~ 83 (249)
T PF10225_consen 31 SRSVLFYYSSGISLGVLAS--LLILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQ 83 (249)
T ss_pred ccChhHHHhhhHHHHHHHH--HHHHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHH
Confidence 4444444444444454322 1222334566777 344444445555555544333
No 307
>PRK11469 hypothetical protein; Provisional
Probab=46.56 E-value=1.5e+02 Score=23.59 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhccccccCCChhhHHHHHHHHHHHHHHHHH-hHHHhhhhccchHHHHHHHHH
Q 020792 35 SAVVLSTFVAVCGSYVFGSAIGYSSPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAI-MSGKIADYIGRRGTMGFSDIV 113 (321)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~-~~g~l~dr~Grr~~l~~~~~~ 113 (321)
+.....-....+..+..+...+. .|.+.-.......+..+....... ++.++.+++|||.-++-|.++
T Consensus 106 ~~~l~LaiAtSiDAlavGi~~~~-----------~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iL 174 (188)
T PRK11469 106 WLLVTTAIATSLDAMAVGVGLAF-----------LQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVL 174 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555556666666654432 233444444444444444444444 444566788888888888887
Q ss_pred HHHHHHH
Q 020792 114 CIIGWVI 120 (321)
Q Consensus 114 ~~~~~~~ 120 (321)
..++.-+
T Consensus 175 I~iGi~i 181 (188)
T PRK11469 175 IGIGVQI 181 (188)
T ss_pred HHHHHHH
Confidence 7777543
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=46.50 E-value=2.7e+02 Score=26.63 Aligned_cols=57 Identities=16% Similarity=0.225 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 127 AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 127 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
.++++--.++.|++.........-+.-+-+|++-|+.+++++.....+|..++..+.
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv 514 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLV 514 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666678999999888888888888889999999999999999999988887776
No 309
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=46.05 E-value=3.1e+02 Score=27.09 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=25.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHhhhhhh
Q 020792 102 GRRGTMGFSDIVCIIGWVIIVFSKAA-WWLDLGRLLVGYGMGL 143 (321)
Q Consensus 102 Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~~~~~ 143 (321)
||.+-++++.+++.++.+...+...+ |.+...-++.+++.+.
T Consensus 55 ~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 55 GRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 56666777777777777766655444 4555555555555443
No 310
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=44.60 E-value=1.6e+02 Score=23.35 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 020792 80 GSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIV 122 (321)
Q Consensus 80 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 122 (321)
.....+...+++++.-.+..|.+||.++.+..++.++..++++
T Consensus 34 ~~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 34 LFMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 3344556667778888899999999988887777766655444
No 311
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=44.21 E-value=1e+02 Score=20.97 Aligned_cols=39 Identities=8% Similarity=0.166 Sum_probs=26.4
Q ss_pred HHHHHhHHHhhhhccc-------hHHHHHHHHHHHHHHHHHHHhhh
Q 020792 88 MIGAIMSGKIADYIGR-------RGTMGFSDIVCIIGWVIIVFSKA 126 (321)
Q Consensus 88 ~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~ 126 (321)
....+.++++.+|..+ ++.+.++.++...+.++++...+
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3445666677776665 67777777777777777776554
No 312
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=43.71 E-value=2e+02 Score=24.41 Aligned_cols=36 Identities=14% Similarity=0.190 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHhhhhhh
Q 020792 108 GFSDIVCIIGWVIIVFS-KAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 108 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~ 143 (321)
+.+.++++++.++..+. ++.+.+.+.-++.+++.+.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 34444454444444443 4444555555555555443
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=43.67 E-value=1.1e+02 Score=21.43 Aligned_cols=21 Identities=5% Similarity=-0.089 Sum_probs=10.4
Q ss_pred HHHhHHHhhhhccchHHHHHH
Q 020792 90 GAIMSGKIADYIGRRGTMGFS 110 (321)
Q Consensus 90 ~~~~~g~l~dr~Grr~~l~~~ 110 (321)
|..++-||=.++|.++.+.+.
T Consensus 59 G~~lG~WLD~~~~t~~~~tl~ 79 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFSWTLT 79 (100)
T ss_pred HHHHHHHHHhhcCCCcHHHHH
Confidence 333334444467766544443
No 314
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=42.97 E-value=3.4e+02 Score=26.76 Aligned_cols=42 Identities=17% Similarity=0.236 Sum_probs=26.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHhhhhhh
Q 020792 102 GRRGTMGFSDIVCIIGWVIIVFSKAA-WWLDLGRLLVGYGMGL 143 (321)
Q Consensus 102 Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~~~~~ 143 (321)
||.+-++++.+++.++.+...+...+ +.+...-++.+++.+.
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 55677888888888887777665444 4444555555655443
No 315
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=42.42 E-value=2.9e+02 Score=25.83 Aligned_cols=66 Identities=20% Similarity=0.292 Sum_probs=35.8
Q ss_pred HhhhhhhhcchhhhhhhccCCCcc-chhHHhHHHHHHHHHHHHHHHhhc----chhhHHHHHHhHHHHHHH
Q 020792 137 VGYGMGLLSYVVPVYIAEITPKNL-RGGFTTVHQLMICIGVSMTYLIGA----FLNWRILALIGTIPCLVQ 202 (321)
Q Consensus 137 ~G~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~i~~----~~~w~~~~~~~~~~~~~~ 202 (321)
.|+........--..+.+.+|.++ +...+|-++...++-..+...+++ ..||+....+.-++.++.
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 344444455555566777777543 455566555554444433334443 348988776654444433
No 316
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=41.69 E-value=2.9e+02 Score=25.51 Aligned_cols=99 Identities=18% Similarity=0.116 Sum_probs=59.6
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK---AAWWLDLGRLLVGYGM 141 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~ 141 (321)
+..++|++.++...+.+...+...++.++.-.-..+.|-|-....+.-...++........ .....+.+-+..|+..
T Consensus 40 vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~ 119 (451)
T COG2233 40 VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVY 119 (451)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 5678999999999999999999999998876533346656655555555545444433322 2444444444444443
Q ss_pred hhhcchhhhhhhccCCCccchh
Q 020792 142 GLLSYVVPVYIAEITPKNLRGG 163 (321)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~r~~ 163 (321)
-..-+.....+...+||-.-|.
T Consensus 120 ~li~~~~~~~l~rlfPPvVtG~ 141 (451)
T COG2233 120 FLISPIVKIRLARLFPPVVTGP 141 (451)
T ss_pred HHHHHHHHHHHHHhCCCceEEe
Confidence 3222222226667777765543
No 317
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=40.94 E-value=2.4e+02 Score=24.39 Aligned_cols=13 Identities=23% Similarity=0.125 Sum_probs=5.4
Q ss_pred HHHhhhhhhhcch
Q 020792 135 LLVGYGMGLLSYV 147 (321)
Q Consensus 135 ~l~G~~~~~~~~~ 147 (321)
.+.++..|..|+.
T Consensus 127 G~l~~~~g~~YTg 139 (303)
T COG1575 127 GLLCIAAGILYTG 139 (303)
T ss_pred HHHHHHheeeecc
Confidence 3344444444443
No 318
>KOG3312 consensus Predicted membrane protein [Function unknown]
Probab=40.59 E-value=1.4e+02 Score=22.48 Aligned_cols=28 Identities=4% Similarity=0.108 Sum_probs=12.9
Q ss_pred hcccCChHHHHhcCChHHHHHHHHHHhC
Q 020792 207 CFIPESPRWLAKTGKGIESEAALQRLRG 234 (321)
Q Consensus 207 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 234 (321)
..+.++.++.+-+..-+...+.+.+...
T Consensus 28 vlvYRt~~Yk~LKa~vdK~sKKLE~~K~ 55 (186)
T KOG3312|consen 28 VLVYRTDKYKRLKAEVDKQSKKLEKKKE 55 (186)
T ss_pred EEEEehhHHHHHHHHHHHHHHHHHHHhh
Confidence 3446665554444444444444444433
No 319
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=40.19 E-value=70 Score=28.38 Aligned_cols=13 Identities=0% Similarity=-0.082 Sum_probs=10.1
Q ss_pred hhhccchHHHHHH
Q 020792 98 ADYIGRRGTMGFS 110 (321)
Q Consensus 98 ~dr~Grr~~l~~~ 110 (321)
.||+.-.+++...
T Consensus 208 ~e~ft~sKllav~ 220 (416)
T KOG2765|consen 208 VERFTLSKLLAVF 220 (416)
T ss_pred cchhhHHHHHHHH
Confidence 8999988876544
No 320
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=40.08 E-value=88 Score=23.54 Aligned_cols=26 Identities=15% Similarity=0.094 Sum_probs=18.7
Q ss_pred hhhccCCCccchhHHhHHHHHHHHHH
Q 020792 151 YIAEITPKNLRGGFTTVHQLMICIGV 176 (321)
Q Consensus 151 ~~~~~~~~~~r~~~~~~~~~~~~~g~ 176 (321)
-+.|++|+..|..+...+.......-
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~k 82 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFVK 82 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 46799999999877777665544433
No 321
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=39.37 E-value=92 Score=23.30 Aligned_cols=26 Identities=12% Similarity=0.108 Sum_probs=18.8
Q ss_pred hhhccCCCccchhHHhHHHHHHHHHH
Q 020792 151 YIAEITPKNLRGGFTTVHQLMICIGV 176 (321)
Q Consensus 151 ~~~~~~~~~~r~~~~~~~~~~~~~g~ 176 (321)
-+.|++|++.|....+.+........
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k 84 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVK 84 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35799999999887777765544443
No 322
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=38.11 E-value=31 Score=28.29 Aligned_cols=48 Identities=10% Similarity=0.032 Sum_probs=31.5
Q ss_pred HHHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHH
Q 020792 131 DLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMT 179 (321)
Q Consensus 131 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 179 (321)
.+...-.|+|.|..+..+..-+.+.+|. ......++....+.+....+
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G 222 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTG 222 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHH
Confidence 3445567899999999999888999974 34455555544444444443
No 323
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.50 E-value=57 Score=23.14 Aligned_cols=35 Identities=31% Similarity=0.608 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcch
Q 020792 113 VCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYV 147 (321)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 147 (321)
...++.++=-++++-++.++...++|++.|.....
T Consensus 59 Ga~iG~llD~~agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 59 GAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 34456666667777778888889999997765443
No 324
>PRK10720 uracil transporter; Provisional
Probab=35.64 E-value=3.2e+02 Score=25.00 Aligned_cols=34 Identities=15% Similarity=0.040 Sum_probs=15.7
Q ss_pred hccchHHHHHHHHHHHHHHH---HHHHhhhhHHHHHH
Q 020792 100 YIGRRGTMGFSDIVCIIGWV---IIVFSKAAWWLDLG 133 (321)
Q Consensus 100 r~Grr~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~ 133 (321)
|...|++..++.+...+..+ +.++..+.+.-.++
T Consensus 298 ~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlg 334 (428)
T PRK10720 298 RVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMG 334 (428)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 44456655555444444444 34444444433333
No 325
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=35.37 E-value=31 Score=25.00 Aligned_cols=10 Identities=10% Similarity=-0.067 Sum_probs=5.8
Q ss_pred HhhcccCChH
Q 020792 205 GLCFIPESPR 214 (321)
Q Consensus 205 ~~~~~~e~~~ 214 (321)
+++.+|+.|.
T Consensus 59 l~~~lp~~P~ 68 (118)
T PRK10697 59 LSFALDPMPD 68 (118)
T ss_pred HHHhccCCcc
Confidence 4456676664
No 326
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=34.84 E-value=2e+02 Score=21.94 Aligned_cols=52 Identities=4% Similarity=-0.013 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 020792 80 GSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLV 137 (321)
Q Consensus 80 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 137 (321)
...+.++..+.+...-.+..|..||+.-.++. +.+-+.+||..++.++.++.
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 35666777777777778888887766433332 23345567777776666543
No 327
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=33.43 E-value=72 Score=16.60 Aligned_cols=10 Identities=40% Similarity=0.531 Sum_probs=3.3
Q ss_pred HhhcccCChH
Q 020792 205 GLCFIPESPR 214 (321)
Q Consensus 205 ~~~~~~e~~~ 214 (321)
...+++|+|+
T Consensus 19 fAI~FRePPr 28 (29)
T PF01405_consen 19 FAIFFREPPR 28 (29)
T ss_dssp HHHHSS----
T ss_pred hhhhccCCCC
Confidence 3355677764
No 328
>COG5547 Small integral membrane protein [Function unknown]
Probab=33.12 E-value=1.2e+02 Score=18.69 Aligned_cols=39 Identities=18% Similarity=0.101 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhhh
Q 020792 104 RGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMG 142 (321)
Q Consensus 104 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 142 (321)
|..++-+.+...+++++..+.---..+++...+.|++.|
T Consensus 8 kypIIgglvglliAili~t~GfwKtilviil~~lGv~iG 46 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIG 46 (62)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555544443222233444445555544
No 329
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=32.74 E-value=3.8e+02 Score=24.34 Aligned_cols=97 Identities=14% Similarity=0.043 Sum_probs=53.0
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHH-HHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDI-VCIIGWVIIVFSKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 143 (321)
+.... +++++...+.+...+...++.++.+....+. -|-....+.- .............++.....+-++.|+....
T Consensus 29 v~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~l 106 (415)
T TIGR00801 29 VGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTL 106 (415)
T ss_pred Hhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 44556 8999999999999999999999998876654 2222222222 2211111122222333333334444444332
Q ss_pred hcc----hhhhhhhccCCCccchh
Q 020792 144 LSY----VVPVYIAEITPKNLRGG 163 (321)
Q Consensus 144 ~~~----~~~~~~~~~~~~~~r~~ 163 (321)
... .....+.+.+|+...+.
T Consensus 107 l~~~~~~~~~~~i~~~~Pp~v~g~ 130 (415)
T TIGR00801 107 LSLLIKKLGPRWLMKLFPPVVTGP 130 (415)
T ss_pred HHHHHHHhhHHHHHhcCCchhHHH
Confidence 221 12335577888877754
No 330
>COG2119 Predicted membrane protein [Function unknown]
Probab=32.16 E-value=2.6e+02 Score=22.20 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHH
Q 020792 82 ILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGW 118 (321)
Q Consensus 82 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 118 (321)
...+...++-..+.++++|+..|.+-.++.+++.+..
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 3455666777788899999999998877766655544
No 331
>PRK10692 hypothetical protein; Provisional
Probab=31.96 E-value=1.3e+02 Score=20.38 Aligned_cols=18 Identities=17% Similarity=0.407 Sum_probs=12.0
Q ss_pred chHHHHHHHHHHHHHHHH
Q 020792 103 RRGTMGFSDIVCIIGWVI 120 (321)
Q Consensus 103 rr~~l~~~~~~~~~~~~~ 120 (321)
||...+++.++++++.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVV 20 (92)
T ss_pred chhhHHHhhHHHHHHHHH
Confidence 566677777777766554
No 332
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=31.87 E-value=1.9e+02 Score=20.57 Aligned_cols=34 Identities=9% Similarity=-0.046 Sum_probs=26.9
Q ss_pred HhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhh
Q 020792 92 IMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSK 125 (321)
Q Consensus 92 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 125 (321)
-..-+.+|.+.|+...+...+..+++..+.+.+-
T Consensus 18 ~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~al 51 (106)
T COG2076 18 TTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLAL 51 (106)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 3445889999999988888888888887777753
No 333
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=31.84 E-value=93 Score=26.44 Aligned_cols=105 Identities=10% Similarity=0.098 Sum_probs=59.5
Q ss_pred cccccchh-ccccccCCChhhHHHHHHHHHHHHHHHHHhHH-HhhhhccchHHHHHHHHHHHHHHHHHHHh-hhhH-HHH
Q 020792 56 GYSSPAQS-GITNDLGLSVAEYSLFGSILTIGAMIGAIMSG-KIADYIGRRGTMGFSDIVCIIGWVIIVFS-KAAW-WLD 131 (321)
Q Consensus 56 ~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~-~~~ 131 (321)
++...+++ ++..+++++.+...++-.+..+.....+.+.. .--++...|..+..|.+.+..++....+- +++- .++
T Consensus 218 NiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifcga~ilLlpr~i~symy 297 (412)
T KOG4830|consen 218 NISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFCGAVILLLPRGIKSYMY 297 (412)
T ss_pred hhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHhhhheeecccchHHHHH
Confidence 33344444 25566777777666666666555555444322 12233344445666666666665544332 2222 244
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccCCCcc
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEITPKNL 160 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 160 (321)
+..++.|++.+........+.+++..++.
T Consensus 298 AisvfIGIAnAimlvtslsitavli~~~~ 326 (412)
T KOG4830|consen 298 AISVFIGIANAIMLVTSLSITAVLINKNT 326 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 55677899988877777777777766544
No 334
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=31.38 E-value=3e+02 Score=22.66 Aligned_cols=52 Identities=15% Similarity=0.214 Sum_probs=37.2
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHH
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWV 119 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 119 (321)
+.+..+++..+.|......+.... +....+.+|.+.++...+|.+...++.+
T Consensus 122 ~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~Gly 173 (224)
T PF09930_consen 122 LAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYPIILGNFMIFLGLY 173 (224)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 455678899998888766655544 6667788899977777777776666543
No 335
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=30.02 E-value=86 Score=16.52 Aligned_cols=10 Identities=10% Similarity=0.125 Sum_probs=6.1
Q ss_pred HhhcccCChH
Q 020792 205 GLCFIPESPR 214 (321)
Q Consensus 205 ~~~~~~e~~~ 214 (321)
...+++|+|+
T Consensus 19 FAIfFRepPr 28 (31)
T PRK11875 19 FAIAFRDPPK 28 (31)
T ss_pred HhhhccCCCC
Confidence 3356677764
No 336
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=29.01 E-value=1.5e+02 Score=26.16 Aligned_cols=47 Identities=15% Similarity=0.229 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 020792 77 SLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF 123 (321)
Q Consensus 77 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 123 (321)
.+.....++|..++..+.+++.|++|....+.+..+++.++.+....
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 46777788888888888899999999999888888888887776665
No 337
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=29.01 E-value=4.1e+02 Score=23.54 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=8.2
Q ss_pred HHHHHHhHHHhhhhcc
Q 020792 87 AMIGAIMSGKIADYIG 102 (321)
Q Consensus 87 ~~i~~~~~g~l~dr~G 102 (321)
.++.....|++..|+|
T Consensus 8 ~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 8 PIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 3444455556665554
No 338
>COG3619 Predicted membrane protein [Function unknown]
Probab=28.96 E-value=3.3e+02 Score=22.43 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHhhhhccc
Q 020792 74 AEYSLFGSILTIGAMIGAIMSGKIADYIGR 103 (321)
Q Consensus 74 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr 103 (321)
...........+..++|......+..|..|
T Consensus 55 ~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 55 AALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334455566666666675555555555554
No 339
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=28.21 E-value=4.6e+02 Score=23.83 Aligned_cols=36 Identities=14% Similarity=-0.081 Sum_probs=21.3
Q ss_pred hhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 148 VPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 148 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
...++.+.++-+.--.+..+...+..+|.++.+++.
T Consensus 296 ~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 296 AVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 333344555444444566777777777777766654
No 340
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=27.97 E-value=2.7e+02 Score=27.15 Aligned_cols=55 Identities=18% Similarity=0.241 Sum_probs=35.6
Q ss_pred HHHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHHHHHHHhhcch
Q 020792 132 LGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 186 (321)
Q Consensus 132 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~~ 186 (321)
--.++.+.+.........-...+-.|++.|....++......+|..+...+...-
T Consensus 570 pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~ 624 (654)
T TIGR00926 570 PQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFE 624 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344455554444444444555666888888888888888888888777766543
No 341
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=27.86 E-value=1.1e+02 Score=16.53 Aligned_cols=21 Identities=14% Similarity=0.257 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHhHHHhhhh
Q 020792 80 GSILTIGAMIGAIMSGKIADY 100 (321)
Q Consensus 80 ~~~~~~~~~i~~~~~g~l~dr 100 (321)
.....++.++.+++.+|+-+|
T Consensus 14 LAAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 14 LAAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred hHhHHHHHHHHHHHHHHHHhc
Confidence 355667777888888888665
No 342
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=27.47 E-value=4.4e+02 Score=23.38 Aligned_cols=95 Identities=16% Similarity=-0.010 Sum_probs=52.5
Q ss_pred HHHhHHHhhhhccchHHHHHHHHHHH---HHHHHHHHhhhhHHHHHHHHHHhhhhhhhcchhhhhhhccCCCccc-hhHH
Q 020792 90 GAIMSGKIADYIGRRGTMGFSDIVCI---IGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR-GGFT 165 (321)
Q Consensus 90 ~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r-~~~~ 165 (321)
-.++.+++.+.+|--+.+..+.++.. --.+....+.|......+..+.|.-.|....-.....-...++++| -.+.
T Consensus 62 l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaLgii~k~D~~y~a~ 141 (354)
T PF04346_consen 62 LSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVALGIIEKEDHKYLAK 141 (354)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhhhhcChhhhHHHHH
Confidence 34566778888998887777655532 1233445566776666776777765555444333344444555555 3333
Q ss_pred hHHHH--HHHHHHHHHHHhhc
Q 020792 166 TVHQL--MICIGVSMTYLIGA 184 (321)
Q Consensus 166 ~~~~~--~~~~g~~~~~~i~~ 184 (321)
|.... ...+|..++..+.+
T Consensus 142 Gil~GiitIPiG~~vggl~~g 162 (354)
T PF04346_consen 142 GILAGIITIPIGCFVGGLIAG 162 (354)
T ss_pred HHHHHHhhhCHHHHHHHHHHh
Confidence 33322 23355555555543
No 343
>PRK03818 putative transporter; Validated
Probab=27.29 E-value=5.5e+02 Score=24.47 Aligned_cols=83 Identities=7% Similarity=0.028 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHhhhhhhhcchhhhhhh
Q 020792 75 EYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFS-KAAWWLDLGRLLVGYGMGLLSYVVPVYIA 153 (321)
Q Consensus 75 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 153 (321)
+.|+...++.+|...|.-+..-+.+..|.+..+ ++.++..+..++..+. ....-+-..+.+-.++.+...+...+++.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 467777777777777776666555556666554 3333333333222221 11111111222222334445566667777
Q ss_pred cc-CCC
Q 020792 154 EI-TPK 158 (321)
Q Consensus 154 ~~-~~~ 158 (321)
|. .+.
T Consensus 515 ~~~~~~ 520 (552)
T PRK03818 515 NLHPTS 520 (552)
T ss_pred cccCCC
Confidence 75 443
No 344
>CHL00031 psbT photosystem II protein T
Probab=27.15 E-value=98 Score=16.61 Aligned_cols=10 Identities=30% Similarity=0.464 Sum_probs=6.3
Q ss_pred HhhcccCChH
Q 020792 205 GLCFIPESPR 214 (321)
Q Consensus 205 ~~~~~~e~~~ 214 (321)
...+++|+|+
T Consensus 19 FAI~FRePPr 28 (33)
T CHL00031 19 FAIFFREPPK 28 (33)
T ss_pred HhheecCCCC
Confidence 3456778775
No 345
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=26.97 E-value=2.7e+02 Score=25.34 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=36.2
Q ss_pred HHHHHhhhhhhhcchhhhhhhccCCCccchhHHhHHHHHHHHHH
Q 020792 133 GRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGV 176 (321)
Q Consensus 133 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 176 (321)
...+.+...-..+...++..++..+|..-|+.+.+.+.-.++|.
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg 418 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGG 418 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcC
Confidence 35556666666778888999999999999999999999988886
No 346
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=26.89 E-value=4.2e+02 Score=22.91 Aligned_cols=24 Identities=21% Similarity=0.445 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHhhcchhhHHH
Q 020792 168 HQLMICIGVSMTYLIGAFLNWRIL 191 (321)
Q Consensus 168 ~~~~~~~g~~~~~~i~~~~~w~~~ 191 (321)
.-...++|.+++.++..+.+|.|.
T Consensus 164 ~D~Lgsv~vIia~i~i~~~~w~~~ 187 (296)
T COG1230 164 GDALGSVGVIIAAIVIRFTGWSWL 187 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcc
Confidence 344567777788777777788874
No 347
>PRK00159 putative septation inhibitor protein; Reviewed
Probab=26.55 E-value=2.1e+02 Score=19.47 Aligned_cols=24 Identities=8% Similarity=-0.079 Sum_probs=12.8
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcc
Q 020792 32 SATSAVVLSTFVAVCGSYVFGSAI 55 (321)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~ 55 (321)
++.....+.++++.+.+.+.+|..
T Consensus 31 ~W~~~~m~glm~~GllWlvvyYl~ 54 (87)
T PRK00159 31 VWYVVLMLGLMLIGLAWLVVNYLA 54 (87)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 344444555555556666655543
No 348
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=26.15 E-value=1.5e+02 Score=19.91 Aligned_cols=18 Identities=17% Similarity=0.456 Sum_probs=11.4
Q ss_pred chHHHHHHHHHHHHHHHH
Q 020792 103 RRGTMGFSDIVCIIGWVI 120 (321)
Q Consensus 103 rr~~l~~~~~~~~~~~~~ 120 (321)
||...+++.++++++.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 566666676666666553
No 349
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=26.10 E-value=5.1e+02 Score=23.63 Aligned_cols=43 Identities=12% Similarity=0.123 Sum_probs=29.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHH
Q 020792 72 SVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVC 114 (321)
Q Consensus 72 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 114 (321)
|.........+-.....+.+++.|...|+..|+|++...+++.
T Consensus 61 sl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lq 103 (503)
T KOG2601|consen 61 SLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQ 103 (503)
T ss_pred eehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhc
Confidence 3334444445555566677888899999999999886665543
No 350
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.24 E-value=76 Score=27.78 Aligned_cols=8 Identities=13% Similarity=0.260 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 020792 173 CIGVSMTY 180 (321)
Q Consensus 173 ~~g~~~~~ 180 (321)
+.|++++.
T Consensus 224 g~~gfl~~ 231 (372)
T KOG2927|consen 224 GAGGFLAF 231 (372)
T ss_pred chhHHHHH
Confidence 33334443
No 351
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=24.97 E-value=6.2e+02 Score=25.33 Aligned_cols=25 Identities=24% Similarity=0.139 Sum_probs=13.4
Q ss_pred HHHHHhhhhhhhcchhhhhhhccCC
Q 020792 133 GRLLVGYGMGLLSYVVPVYIAEITP 157 (321)
Q Consensus 133 ~~~l~G~~~~~~~~~~~~~~~~~~~ 157 (321)
.-...|.+.|....+...++..+..
T Consensus 189 ~a~~gG~~~Gaa~Gv~~Gli~~l~~ 213 (764)
T TIGR02865 189 ISYIGGSGAGAAGGVVIGVILGLAN 213 (764)
T ss_pred HHHhcCchHhHHHHHHHHHHHHhcC
Confidence 3344555666555555555555543
No 352
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=24.33 E-value=2.3e+02 Score=19.37 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=21.6
Q ss_pred HHHHHhhChhhHHHcHHHHHhhc-CCCCchHHHHHHHHHH
Q 020792 280 MVLQQFGGVNGIAFYASSIFISA-GFSGSIGMIAMVVIQV 318 (321)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~i 318 (321)
..+..+.++..+..|.|..+... .-.....++..++..+
T Consensus 24 i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~ 63 (91)
T PF04341_consen 24 IFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQI 63 (91)
T ss_pred HHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHH
Confidence 33333445677888888888654 2123344455554443
No 353
>PRK07419 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional
Probab=24.16 E-value=4.7e+02 Score=22.63 Aligned_cols=8 Identities=13% Similarity=-0.043 Sum_probs=4.5
Q ss_pred CCCccchh
Q 020792 156 TPKNLRGG 163 (321)
Q Consensus 156 ~~~~~r~~ 163 (321)
+|-++||.
T Consensus 140 ~~l~y~gL 147 (304)
T PRK07419 140 FRLGYQGL 147 (304)
T ss_pred cccCCCCc
Confidence 45566654
No 354
>PRK10666 ammonium transporter; Provisional
Probab=23.92 E-value=5.7e+02 Score=23.47 Aligned_cols=33 Identities=12% Similarity=0.066 Sum_probs=18.0
Q ss_pred hhhccCCCccchhHHhHHHHHHHHHHHHHHHhh
Q 020792 151 YIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG 183 (321)
Q Consensus 151 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 183 (321)
++.+.+.-+.---+..+...+..+|.+..++..
T Consensus 323 ~l~~~~~iDD~~~a~~vHgv~Gi~G~l~~glfa 355 (428)
T PRK10666 323 MLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFA 355 (428)
T ss_pred HHHhcCCCCCCcCccHhhhHhHHHHHHHHHHhh
Confidence 343334333334566666666667766655554
No 355
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=23.74 E-value=2.5e+02 Score=23.10 Aligned_cols=55 Identities=20% Similarity=0.346 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 020792 83 LTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVG 138 (321)
Q Consensus 83 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 138 (321)
..+|..+|..+..++.||+.....-.++.+...++.-...-.++...++++ .+.|
T Consensus 11 Il~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~vi~s-lvlG 65 (226)
T PF04474_consen 11 ILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLVILS-LVLG 65 (226)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHHHHH-HHHH
Confidence 345566666666677777766666677776666665544444454444433 3444
No 356
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=22.94 E-value=6.7e+02 Score=23.96 Aligned_cols=83 Identities=16% Similarity=0.070 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHhhhhhhhcchhhhhhh
Q 020792 75 EYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVFSKA-AWWLDLGRLLVGYGMGLLSYVVPVYIA 153 (321)
Q Consensus 75 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~~~~~~~~~~~~~ 153 (321)
+.|+...++.+|...|.-+..-+. +.|-+..+ ++.++..+..++..+... ..-+-....+-.++.+...+...++..
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~-~~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIK-EMGLTLFL-LGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVL 528 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHH-HhhHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHH
Confidence 467778888888888876666664 35555543 344444443332222111 110111111122333445566667777
Q ss_pred ccCCCc
Q 020792 154 EITPKN 159 (321)
Q Consensus 154 ~~~~~~ 159 (321)
|..+.+
T Consensus 529 ~~~~~~ 534 (562)
T TIGR03802 529 ERAGSS 534 (562)
T ss_pred HhcCCC
Confidence 766543
No 357
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=22.82 E-value=91 Score=21.62 Aligned_cols=25 Identities=24% Similarity=0.254 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhHHHhhhhccch
Q 020792 80 GSILTIGAMIGAIMSGKIADYIGRR 104 (321)
Q Consensus 80 ~~~~~~~~~i~~~~~g~l~dr~Grr 104 (321)
.....+.+.+.+.+.|.+.||..||
T Consensus 81 ~~~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 81 DWITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3445566667888899999999876
No 358
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=22.63 E-value=3.4e+02 Score=24.48 Aligned_cols=98 Identities=15% Similarity=0.058 Sum_probs=56.1
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHhhhhhh
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF-SKAAWWLDLGRLLVGYGMGL 143 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~ 143 (321)
+.+..|++.++.........+...++.++..+-.-++|.|..+..+.-...+....... ...+.....+-++.|+..-.
T Consensus 19 ~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~il 98 (406)
T TIGR03173 19 VGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVIL 98 (406)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 34456899988888888888888888887643222577777766655443333222221 22334444445555544322
Q ss_pred hcchhhhhhhccCCCccchh
Q 020792 144 LSYVVPVYIAEITPKNLRGG 163 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~~r~~ 163 (321)
.. .....+.+.+|+...|.
T Consensus 99 lg-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 99 LA-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred HH-HHHHHHHHHCCcHHHHH
Confidence 22 24456777888755443
No 359
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=22.52 E-value=5.9e+02 Score=23.15 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=22.8
Q ss_pred ccCCCccchhHHhHHHHHHHHHHHHHHHhhc--chhhHHH
Q 020792 154 EITPKNLRGGFTTVHQLMICIGVSMTYLIGA--FLNWRIL 191 (321)
Q Consensus 154 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~--~~~w~~~ 191 (321)
|.++-+.---+..+...+...|.++.++... .+++|..
T Consensus 315 ~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~~~~~l~~Ql~ 354 (404)
T TIGR03644 315 DKLKIDDPVGAISVHGVAGIWGTLVVPITNGDASFGAQLI 354 (404)
T ss_pred HhCCCCCCcCchHhhhHHHHHHHHHHHHhccchHHHHHHH
Confidence 4444444456677777777778777776663 2355543
No 360
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=22.36 E-value=1.6e+02 Score=18.91 Aligned_cols=40 Identities=25% Similarity=0.165 Sum_probs=32.7
Q ss_pred cccccCCChhhHHHHHHHHHHHHHHHHHhHHHhhhhccch
Q 020792 65 ITNDLGLSVAEYSLFGSILTIGAMIGAIMSGKIADYIGRR 104 (321)
Q Consensus 65 ~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr 104 (321)
+.--+|.+..+.+.+.....+...+-..+..++-||+-+|
T Consensus 25 ~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 25 IAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444678888888888888888888999999999998655
No 361
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.14 E-value=5.9e+02 Score=22.64 Aligned_cols=100 Identities=8% Similarity=-0.036 Sum_probs=47.7
Q ss_pred ccchhccccccCCChhhHHHHHHHHHHHHHHHHHhHHH--hhh-hccchHHHHHHHHHHHHHHHHHHHhh----------
Q 020792 59 SPAQSGITNDLGLSVAEYSLFGSILTIGAMIGAIMSGK--IAD-YIGRRGTMGFSDIVCIIGWVIIVFSK---------- 125 (321)
Q Consensus 59 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~g~--l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~---------- 125 (321)
-..+|.+.++..-+-+--++...+..++....-+..-+ ... +...-+.+..-+.+.+++.++.++-.
T Consensus 31 wv~lp~lv~elpe~wslpsyl~vvVqla~lgpLi~tllhk~~~~~i~~VPiif~ll~~a~v~~l~laflW~~ts~V~g~~ 110 (439)
T KOG4255|consen 31 WVELPLLVKELPEGWSLPSYLSVVVQLANLGPLIVTLLHKGAPGTIPTVPIIFVLLLLACVCQLGLAFLWHDTSPVFGAL 110 (439)
T ss_pred eeehhHHHhhcCcccccchHHHHHHHHHcchhHHHHHHHhhCCCcCCCCCchhHHHHHHHHHHHHHHHHHhcchhhhcCc
Confidence 34455566665433333344444444443332222111 111 11122333333444466777666522
Q ss_pred hhHHHHHHHHHHhhhhhhhcchhhhhhhccCCC
Q 020792 126 AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 158 (321)
Q Consensus 126 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 158 (321)
.-|.++...+...+............+++.-|.
T Consensus 111 hS~afl~L~F~LAivdc~SnVtFLPFMs~lpp~ 143 (439)
T KOG4255|consen 111 HSWAFLSLLFGLAIVDCTSNVTFLPFMSQLPPA 143 (439)
T ss_pred chHHHHHHHHHHHHHHhhccchhhhhhhhCChH
Confidence 234555666666666655566666677766554
No 362
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=20.64 E-value=3.5e+02 Score=19.77 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=20.5
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHhHHHhh
Q 020792 69 LGLSVAEYSLFGSILTIGAMIGAIMSGKIA 98 (321)
Q Consensus 69 ~~~s~~~~~~~~~~~~~~~~i~~~~~g~l~ 98 (321)
.|++.++.++...+..+..++.+++..++.
T Consensus 19 rGlT~~El~~~a~~~~~~g~~~gl~la~~~ 48 (121)
T PF11990_consen 19 RGLTADELGLAAGVGFVAGLVVGLPLALLT 48 (121)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888887777776666666666655553
No 363
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=20.60 E-value=3.2e+02 Score=19.39 Aligned_cols=20 Identities=10% Similarity=-0.082 Sum_probs=11.2
Q ss_pred hhhhhhhcchhhhhhhccCC
Q 020792 138 GYGMGLLSYVVPVYIAEITP 157 (321)
Q Consensus 138 G~~~~~~~~~~~~~~~~~~~ 157 (321)
+.|.-+.++...++..|...
T Consensus 60 ~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 60 ATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HhhHccccccHHHHHHHHHH
Confidence 33333445666667777654
No 364
>KOG3500 consensus Vacuolar H+-ATPase V0 sector, subunit M9.7 (M9.2) [Energy production and conversion]
Probab=20.59 E-value=2.8e+02 Score=18.59 Aligned_cols=41 Identities=12% Similarity=-0.047 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 020792 83 LTIGAMIGAIMSGKIADYIGRRGTMGFSDIVCIIGWVIIVF 123 (321)
Q Consensus 83 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 123 (321)
+.+..++.++...+...|...|-++-...++.++++.++..
T Consensus 10 ftvfw~~v~~~~pi~~~kgP~~~li~~~lvlTAVCCwlfWl 50 (84)
T KOG3500|consen 10 FTVFWGIVGICGPICFPKGPNRGLIRCMLVLTAVCCWLFWL 50 (84)
T ss_pred HHHHHHHHHHhcceeccCCCCcChhHHHHHHHHHHHHHHHH
Confidence 34444555666667888888888888888888887776543
No 365
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.54 E-value=3e+02 Score=19.00 Aligned_cols=30 Identities=13% Similarity=-0.085 Sum_probs=12.0
Q ss_pred hhhhccchHHHHHHHHHHHHHHHHHHHhhh
Q 020792 97 IADYIGRRGTMGFSDIVCIIGWVIIVFSKA 126 (321)
Q Consensus 97 l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 126 (321)
.++|+-+-..++.+.+.++.+..-..++..
T Consensus 23 kaEr~~q~ilti~aiVg~i~Gf~~Qqls~t 52 (101)
T KOG4112|consen 23 KAERFQQLILTIGAIVGFIYGFAQQQLSVT 52 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444433344444444444333333333
No 366
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=20.32 E-value=8.9e+02 Score=24.40 Aligned_cols=15 Identities=13% Similarity=-0.009 Sum_probs=6.4
Q ss_pred HHHHHhHHHhhhhcc
Q 020792 88 MIGAIMSGKIADYIG 102 (321)
Q Consensus 88 ~i~~~~~g~l~dr~G 102 (321)
.+.+++..++.+|..
T Consensus 23 ll~~l~s~~lkeRl~ 37 (810)
T TIGR00844 23 SIFSLVSLFVKEKLY 37 (810)
T ss_pred HHHHHHHHHHHhhcC
Confidence 334444444444443
No 367
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins.
Probab=20.26 E-value=5.6e+02 Score=22.06 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=16.5
Q ss_pred hhHHhHHHHHHHHHHHHHHHhhcchhhHHHHH
Q 020792 162 GGFTTVHQLMICIGVSMTYLIGAFLNWRILAL 193 (321)
Q Consensus 162 ~~~~~~~~~~~~~g~~~~~~i~~~~~w~~~~~ 193 (321)
+.++++....-.+...........+||+....
T Consensus 84 ~~~~aFl~a~p~~n~~~~~~~~~~lg~~~~~~ 115 (307)
T PF03773_consen 84 GAAMAFLLASPLLNPIVLLLTWAALGWKFTLI 115 (307)
T ss_pred chhHHHHHhhHHhhHHHHHHHHHHhCcHHHHH
Confidence 44555555444444444444444557776554
No 368
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=20.15 E-value=3e+02 Score=18.80 Aligned_cols=23 Identities=9% Similarity=-0.171 Sum_probs=11.2
Q ss_pred CchHHHHHHHHHHHHHHHHHhhc
Q 020792 32 SATSAVVLSTFVAVCGSYVFGSA 54 (321)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~ 54 (321)
++.....+.++++.+...+.+|.
T Consensus 31 ~W~~p~m~~lmllGL~WiVvyYi 53 (87)
T PF06781_consen 31 RWYAPLMLGLMLLGLLWIVVYYI 53 (87)
T ss_pred ccHHHHHHHHHHHHHHHHhhhhc
Confidence 33344444455555555555443
Done!