Query 020794
Match_columns 321
No_of_seqs 273 out of 2312
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:17:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020794.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020794hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lou_A Formyltetrahydrofolate 100.0 2.6E-66 8.7E-71 492.4 30.2 247 36-320 4-257 (292)
2 3o1l_A Formyltetrahydrofolate 100.0 2.9E-66 1E-70 494.1 30.4 243 40-320 20-267 (302)
3 3n0v_A Formyltetrahydrofolate 100.0 5.7E-66 1.9E-70 488.7 31.7 243 39-320 5-252 (286)
4 3obi_A Formyltetrahydrofolate 100.0 7.4E-66 2.5E-70 488.4 27.3 243 41-320 5-252 (288)
5 3nrb_A Formyltetrahydrofolate 100.0 7.6E-66 2.6E-70 488.1 26.4 242 40-320 5-251 (287)
6 3p9x_A Phosphoribosylglycinami 100.0 7.2E-44 2.4E-48 324.6 20.3 160 128-320 2-167 (211)
7 3kcq_A Phosphoribosylglycinami 100.0 1.2E-43 4E-48 323.9 21.2 161 126-320 6-168 (215)
8 4ds3_A Phosphoribosylglycinami 100.0 1.3E-43 4.4E-48 322.4 21.2 161 127-320 6-172 (209)
9 3tqr_A Phosphoribosylglycinami 100.0 1.5E-43 5.2E-48 323.1 21.1 161 126-320 3-169 (215)
10 3da8_A Probable 5'-phosphoribo 100.0 4.8E-43 1.6E-47 319.8 22.3 162 124-320 8-175 (215)
11 1jkx_A GART;, phosphoribosylgl 100.0 1.4E-42 4.8E-47 315.6 20.8 159 129-320 1-165 (212)
12 1meo_A Phosophoribosylglycinam 100.0 1.7E-42 6E-47 314.6 21.0 159 129-320 1-165 (209)
13 3av3_A Phosphoribosylglycinami 100.0 8.6E-42 2.9E-46 310.2 21.0 160 128-320 3-168 (212)
14 3auf_A Glycinamide ribonucleot 100.0 8.7E-42 3E-46 313.9 21.2 166 122-320 16-187 (229)
15 2ywr_A Phosphoribosylglycinami 100.0 2.1E-41 7.2E-46 308.3 21.0 159 129-320 2-166 (216)
16 1fmt_A Methionyl-tRNA FMet for 100.0 4.7E-37 1.6E-41 293.8 18.8 155 127-320 2-167 (314)
17 2bln_A Protein YFBG; transfera 100.0 5.1E-37 1.8E-41 292.4 16.2 153 129-320 1-161 (305)
18 3q0i_A Methionyl-tRNA formyltr 100.0 2.9E-36 1E-40 289.0 16.3 155 127-320 6-171 (318)
19 3tqq_A Methionyl-tRNA formyltr 100.0 1.1E-35 3.9E-40 284.4 19.1 154 128-320 2-166 (314)
20 3rfo_A Methionyl-tRNA formyltr 100.0 8.8E-36 3E-40 285.6 18.0 156 126-320 2-168 (317)
21 2bw0_A 10-FTHFDH, 10-formyltet 100.0 1.6E-35 5.5E-40 284.8 16.6 158 127-320 21-185 (329)
22 1z7e_A Protein aRNA; rossmann 100.0 5.6E-35 1.9E-39 299.7 17.4 153 129-320 1-161 (660)
23 1zgh_A Methionyl-tRNA formyltr 99.9 4E-26 1.4E-30 213.5 8.9 83 204-320 77-159 (260)
24 3p96_A Phosphoserine phosphata 99.7 3.2E-17 1.1E-21 159.1 14.5 124 38-164 8-138 (415)
25 1zpv_A ACT domain protein; str 99.5 1E-13 3.6E-18 107.4 11.2 73 40-115 3-75 (91)
26 2nyi_A Unknown protein; protei 99.5 2.3E-14 7.7E-19 127.4 7.9 77 37-115 88-168 (195)
27 1u8s_A Glycine cleavage system 99.5 2.7E-13 9.1E-18 119.4 14.0 72 41-116 5-76 (192)
28 2nyi_A Unknown protein; protei 99.5 7.8E-14 2.7E-18 123.9 9.4 73 39-115 2-78 (195)
29 1u8s_A Glycine cleavage system 99.4 1.8E-12 6.2E-17 114.0 12.5 78 37-115 88-171 (192)
30 2ko1_A CTR148A, GTP pyrophosph 98.3 4E-06 1.4E-10 63.4 8.6 66 40-111 3-68 (88)
31 3p96_A Phosphoserine phosphata 97.5 0.00079 2.7E-08 64.8 12.4 92 38-134 97-190 (415)
32 2f1f_A Acetolactate synthase i 97.2 0.00042 1.4E-08 60.4 6.2 51 41-91 2-52 (164)
33 1y7p_A Hypothetical protein AF 97.0 0.00098 3.4E-08 60.8 6.4 89 41-137 3-96 (223)
34 2re1_A Aspartokinase, alpha an 97.0 0.0017 5.8E-08 55.7 7.6 89 40-137 23-112 (167)
35 2pc6_A Probable acetolactate s 97.0 0.0011 3.8E-08 57.8 6.3 68 40-109 2-69 (165)
36 2f06_A Conserved hypothetical 96.9 0.0029 9.8E-08 52.4 8.2 63 38-108 2-64 (144)
37 2fgc_A Acetolactate synthase, 96.8 0.0031 1.1E-07 56.4 7.8 68 40-109 27-94 (193)
38 2dt9_A Aspartokinase; protein- 96.8 0.013 4.3E-07 50.1 11.2 104 40-152 14-122 (167)
39 2jhe_A Transcription regulator 95.9 0.039 1.3E-06 45.7 9.0 33 45-77 3-35 (190)
40 1ygy_A PGDH, D-3-phosphoglycer 95.8 0.029 9.8E-07 56.5 9.2 64 42-109 454-517 (529)
41 2f06_A Conserved hypothetical 95.7 0.029 9.8E-07 46.3 7.6 57 44-108 74-130 (144)
42 4go7_X Aspartokinase; transfer 95.4 0.035 1.2E-06 49.6 7.5 96 37-139 30-126 (200)
43 1sc6_A PGDH, D-3-phosphoglycer 95.1 0.073 2.5E-06 52.0 9.1 50 41-92 330-379 (404)
44 3s1t_A Aspartokinase; ACT doma 94.8 0.33 1.1E-05 42.1 11.7 103 42-152 16-123 (181)
45 1pvv_A Otcase, ornithine carba 94.6 0.27 9.4E-06 46.7 11.5 55 199-273 218-277 (315)
46 2i6u_A Otcase, ornithine carba 94.4 0.29 9.9E-06 46.4 11.2 75 176-273 197-271 (307)
47 1vlv_A Otcase, ornithine carba 93.9 0.27 9.3E-06 47.0 9.9 28 244-273 263-291 (325)
48 2dtj_A Aspartokinase; protein- 93.3 0.49 1.7E-05 40.6 9.7 105 41-155 14-125 (178)
49 4gmf_A Yersiniabactin biosynth 92.7 0.065 2.2E-06 51.7 3.5 55 124-185 3-57 (372)
50 2re1_A Aspartokinase, alpha an 92.2 0.43 1.5E-05 40.5 7.7 62 40-114 101-165 (167)
51 4ep1_A Otcase, ornithine carba 92.0 0.88 3E-05 43.8 10.4 59 199-273 242-300 (340)
52 3gd5_A Otcase, ornithine carba 91.9 1.6 5.5E-05 41.6 12.0 120 127-273 156-279 (323)
53 3grf_A Ornithine carbamoyltran 91.8 0.5 1.7E-05 45.1 8.5 122 127-273 160-289 (328)
54 3tpf_A Otcase, ornithine carba 91.4 0.6 2E-05 44.2 8.4 59 200-273 210-268 (307)
55 3k5p_A D-3-phosphoglycerate de 90.9 0.5 1.7E-05 46.5 7.6 50 40-93 341-390 (416)
56 2dtj_A Aspartokinase; protein- 90.7 0.4 1.4E-05 41.2 5.9 64 39-115 92-158 (178)
57 3ab4_A Aspartokinase; aspartat 88.3 4.1 0.00014 39.5 11.8 87 43-137 265-353 (421)
58 2dt9_A Aspartokinase; protein- 87.6 1.4 4.8E-05 37.1 7.1 63 40-115 93-158 (167)
59 4a8t_A Putrescine carbamoyltra 87.3 1 3.5E-05 43.2 6.7 27 245-273 272-298 (339)
60 3mtj_A Homoserine dehydrogenas 87.0 1.1 3.7E-05 44.4 6.9 70 39-111 356-425 (444)
61 1zq6_A Otcase, ornithine carba 86.5 3.9 0.00013 39.5 10.3 28 243-273 294-321 (359)
62 4f2g_A Otcase 1, ornithine car 85.9 1.3 4.4E-05 42.0 6.4 122 136-273 130-270 (309)
63 1dxh_A Ornithine carbamoyltran 85.5 3.5 0.00012 39.4 9.3 25 244-270 252-277 (335)
64 1duv_G Octase-1, ornithine tra 85.4 3.5 0.00012 39.4 9.3 25 244-270 252-277 (333)
65 4a8p_A Putrescine carbamoyltra 85.4 1.3 4.4E-05 42.9 6.3 27 245-273 250-276 (355)
66 2w37_A Ornithine carbamoyltran 85.0 3.9 0.00013 39.5 9.5 25 244-270 271-298 (359)
67 3rjz_A N-type ATP pyrophosphat 84.4 3.5 0.00012 37.5 8.4 79 128-210 4-96 (237)
68 2ef0_A Ornithine carbamoyltran 83.5 2.5 8.4E-05 39.9 7.2 122 136-273 130-267 (301)
69 3s1t_A Aspartokinase; ACT doma 83.0 2.5 8.7E-05 36.4 6.6 63 40-115 94-159 (181)
70 1ml4_A Aspartate transcarbamoy 82.9 5.9 0.0002 37.4 9.6 111 128-266 155-269 (308)
71 3l76_A Aspartokinase; alloster 82.9 1.4 4.7E-05 45.2 5.6 93 40-138 442-537 (600)
72 4fb5_A Probable oxidoreductase 78.8 3.1 0.00011 38.3 6.1 73 126-212 23-102 (393)
73 4amu_A Ornithine carbamoyltran 77.9 8.5 0.00029 37.2 9.0 26 244-271 279-304 (365)
74 3mwb_A Prephenate dehydratase; 77.6 9.8 0.00033 36.0 9.2 70 40-112 199-270 (313)
75 4go7_X Aspartokinase; transfer 77.6 4.9 0.00017 35.6 6.7 62 41-115 114-178 (200)
76 4had_A Probable oxidoreductase 77.4 4.4 0.00015 37.3 6.6 71 125-212 20-94 (350)
77 1zhv_A Hypothetical protein AT 76.9 3.9 0.00013 34.1 5.5 34 43-76 63-99 (134)
78 3sds_A Ornithine carbamoyltran 76.7 11 0.00037 36.3 9.3 118 127-271 187-312 (353)
79 3csu_A Protein (aspartate carb 76.3 8.8 0.0003 36.2 8.4 72 172-266 197-268 (310)
80 2qmw_A PDT, prephenate dehydra 75.4 10 0.00034 35.1 8.4 58 50-111 197-255 (267)
81 4ekn_B Aspartate carbamoyltran 75.2 16 0.00053 34.4 9.8 112 127-266 150-264 (306)
82 3ip3_A Oxidoreductase, putativ 74.8 6.4 0.00022 36.2 7.0 74 128-212 2-75 (337)
83 3q2i_A Dehydrogenase; rossmann 74.5 4.9 0.00017 37.3 6.1 72 125-212 10-83 (354)
84 2qmx_A Prephenate dehydratase; 74.4 8.8 0.0003 35.7 7.8 67 42-111 200-267 (283)
85 3d6n_B Aspartate carbamoyltran 73.5 8.4 0.00029 36.1 7.5 115 139-272 125-256 (291)
86 1wy5_A TILS, hypothetical UPF0 71.9 12 0.0004 34.6 8.1 79 100-188 5-91 (317)
87 4gqa_A NAD binding oxidoreduct 71.6 5.7 0.00019 37.6 6.0 75 125-212 23-104 (412)
88 3ec7_A Putative dehydrogenase; 71.5 12 0.0004 34.9 8.1 72 126-212 21-95 (357)
89 3mz0_A Inositol 2-dehydrogenas 69.3 12 0.00041 34.4 7.5 70 128-212 2-74 (344)
90 3kzn_A Aotcase, N-acetylornith 69.0 80 0.0027 30.0 14.1 61 199-273 260-321 (359)
91 3luy_A Probable chorismate mut 68.5 22 0.00076 33.7 9.3 67 43-111 208-275 (329)
92 1ni5_A Putative cell cycle pro 66.9 12 0.0004 36.5 7.2 61 128-188 13-80 (433)
93 3rc1_A Sugar 3-ketoreductase; 66.9 8.4 0.00029 35.8 6.0 51 126-185 25-78 (350)
94 3tvi_A Aspartokinase; structur 66.5 15 0.00051 36.2 7.9 64 40-114 372-438 (446)
95 3ohs_X Trans-1,2-dihydrobenzen 66.5 7.2 0.00025 35.8 5.3 70 128-212 2-74 (334)
96 1oth_A Protein (ornithine tran 65.8 22 0.00077 33.6 8.7 117 128-271 155-275 (321)
97 3tvi_A Aspartokinase; structur 65.4 14 0.00048 36.4 7.4 81 43-137 299-383 (446)
98 3moi_A Probable dehydrogenase; 64.8 8.5 0.00029 36.3 5.6 69 127-212 1-72 (387)
99 3c1m_A Probable aspartokinase; 64.6 16 0.00054 36.0 7.7 64 40-114 402-468 (473)
100 4h3v_A Oxidoreductase domain p 64.3 8.9 0.00031 35.2 5.5 73 127-212 5-83 (390)
101 3mah_A Aspartokinase; aspartat 64.1 12 0.00042 30.9 5.9 37 40-76 16-55 (157)
102 3l76_A Aspartokinase; alloster 64.1 12 0.0004 38.3 6.8 87 43-138 271-365 (600)
103 3fwz_A Inner membrane protein 64.0 15 0.00051 29.3 6.2 72 125-211 4-78 (140)
104 3c1m_A Probable aspartokinase; 63.8 13 0.00046 36.5 7.0 63 40-113 316-381 (473)
105 3u3x_A Oxidoreductase; structu 63.6 17 0.00057 34.0 7.3 52 127-185 25-76 (361)
106 1zh8_A Oxidoreductase; TM0312, 63.1 12 0.00042 34.5 6.2 71 125-212 15-90 (340)
107 3r7f_A Aspartate carbamoyltran 62.6 12 0.00043 35.1 6.2 197 41-272 36-255 (304)
108 3e9m_A Oxidoreductase, GFO/IDH 62.6 12 0.00041 34.3 6.1 50 127-184 4-54 (330)
109 3ab4_A Aspartokinase; aspartat 62.2 17 0.00058 35.1 7.3 63 40-115 342-407 (421)
110 3uuw_A Putative oxidoreductase 62.1 6.8 0.00023 35.4 4.2 51 127-184 5-56 (308)
111 2nvw_A Galactose/lactose metab 61.9 19 0.00066 35.3 7.8 53 127-183 38-92 (479)
112 4h31_A Otcase, ornithine carba 61.5 16 0.00054 35.1 6.8 27 244-272 278-305 (358)
113 1nvm_B Acetaldehyde dehydrogen 61.1 18 0.0006 33.7 6.9 73 127-211 3-78 (312)
114 1phz_A Protein (phenylalanine 60.7 15 0.00052 36.3 6.7 68 40-112 34-101 (429)
115 3evn_A Oxidoreductase, GFO/IDH 60.7 11 0.00038 34.5 5.4 48 127-183 4-53 (329)
116 1ydw_A AX110P-like protein; st 60.5 18 0.00062 33.4 6.9 51 126-183 4-54 (362)
117 3btv_A Galactose/lactose metab 59.9 15 0.00053 35.3 6.5 50 127-183 19-73 (438)
118 1zvp_A Hypothetical protein VC 57.6 11 0.00039 31.2 4.4 34 43-76 72-108 (133)
119 3euw_A MYO-inositol dehydrogen 56.4 21 0.00072 32.7 6.6 68 127-212 3-73 (344)
120 2p2s_A Putative oxidoreductase 56.3 17 0.00059 33.2 5.9 48 127-181 3-50 (336)
121 3db2_A Putative NADPH-dependen 56.0 16 0.00055 33.7 5.7 51 127-184 4-54 (354)
122 3cea_A MYO-inositol 2-dehydrog 55.9 38 0.0013 30.8 8.2 52 126-184 6-58 (346)
123 3dty_A Oxidoreductase, GFO/IDH 55.9 14 0.00048 34.9 5.4 74 126-213 10-94 (398)
124 2fhm_A Probable acylphosphatas 55.8 33 0.0011 26.1 6.6 57 102-162 17-73 (91)
125 3q98_A Transcarbamylase; rossm 55.5 75 0.0026 30.9 10.6 130 127-270 190-337 (399)
126 3abi_A Putative uncharacterize 55.2 19 0.00064 33.6 6.1 71 125-211 13-84 (365)
127 3nbm_A PTS system, lactose-spe 54.9 13 0.00045 29.5 4.3 65 125-189 3-86 (108)
128 4huj_A Uncharacterized protein 54.8 15 0.0005 31.8 4.9 67 128-213 23-90 (220)
129 1pg5_A Aspartate carbamoyltran 54.5 80 0.0027 29.4 10.2 51 201-266 210-261 (299)
130 3loq_A Universal stress protei 54.4 89 0.003 27.3 10.2 116 126-265 168-291 (294)
131 3a06_A 1-deoxy-D-xylulose 5-ph 53.4 32 0.0011 33.4 7.4 76 129-211 4-92 (376)
132 3otg_A CALG1; calicheamicin, T 52.7 55 0.0019 29.8 8.7 56 125-189 17-75 (412)
133 3ezy_A Dehydrogenase; structur 52.3 39 0.0013 30.9 7.7 69 128-212 2-72 (344)
134 1r0k_A 1-deoxy-D-xylulose 5-ph 51.6 38 0.0013 32.9 7.7 56 128-189 4-61 (388)
135 4etn_A LMPTP, low molecular we 51.6 20 0.00069 31.0 5.3 82 126-213 32-119 (184)
136 4hkt_A Inositol 2-dehydrogenas 51.0 30 0.001 31.4 6.6 48 128-183 3-51 (331)
137 3rsc_A CALG2; TDP, enediyne, s 50.6 90 0.0031 28.4 9.9 55 125-188 17-74 (415)
138 3s2u_A UDP-N-acetylglucosamine 50.6 36 0.0012 31.5 7.2 54 128-188 2-58 (365)
139 3a2k_A TRNA(Ile)-lysidine synt 49.9 13 0.00046 36.3 4.3 61 127-188 17-85 (464)
140 3mah_A Aspartokinase; aspartat 49.7 19 0.00064 29.8 4.6 63 40-115 86-151 (157)
141 1h6d_A Precursor form of gluco 49.6 23 0.00078 34.1 5.8 53 125-183 80-132 (433)
142 3v5n_A Oxidoreductase; structu 49.1 15 0.00052 35.0 4.5 53 127-183 36-89 (417)
143 3rh0_A Arsenate reductase; oxi 48.7 38 0.0013 28.2 6.3 82 123-211 15-99 (148)
144 1ulr_A Putative acylphosphatas 48.3 59 0.002 24.5 6.9 57 102-162 17-73 (88)
145 2cdq_A Aspartokinase; aspartat 47.9 24 0.00084 35.3 5.9 65 40-115 418-484 (510)
146 1k92_A Argininosuccinate synth 47.6 40 0.0014 33.4 7.3 60 125-189 7-72 (455)
147 2cwd_A Low molecular weight ph 47.4 67 0.0023 26.7 7.8 81 126-213 2-92 (161)
148 3v7e_A Ribosome-associated pro 47.3 13 0.00044 27.9 2.9 43 145-189 19-61 (82)
149 1rwu_A Hypothetical UPF0250 pr 44.8 1.1E+02 0.0039 24.3 8.4 65 40-111 34-101 (109)
150 1tlt_A Putative oxidoreductase 44.8 57 0.002 29.3 7.5 49 127-183 4-54 (319)
151 1js1_X Transcarbamylase; alpha 44.7 55 0.0019 31.0 7.5 119 136-273 143-281 (324)
152 1vmb_A 30S ribosomal protein S 44.7 71 0.0024 26.6 7.4 69 36-107 13-98 (140)
153 2ho3_A Oxidoreductase, GFO/IDH 44.4 49 0.0017 29.9 7.0 49 128-184 1-50 (325)
154 3k32_A Uncharacterized protein 44.0 49 0.0017 28.3 6.6 57 128-189 6-65 (203)
155 3e18_A Oxidoreductase; dehydro 43.8 25 0.00086 32.7 5.0 49 127-184 4-53 (359)
156 3tsa_A SPNG, NDP-rhamnosyltran 43.6 96 0.0033 28.0 8.8 51 128-187 1-54 (391)
157 3olq_A Universal stress protei 43.3 95 0.0033 27.3 8.6 70 173-265 233-306 (319)
158 2w6k_A COBE; biosynthetic prot 43.3 56 0.0019 27.2 6.6 62 127-188 9-75 (145)
159 2der_A TRNA-specific 2-thiouri 42.4 41 0.0014 32.2 6.3 58 127-189 16-86 (380)
160 1w2i_A Acylphosphatase; hydrol 42.3 58 0.002 24.7 6.0 57 102-162 19-75 (91)
161 4fzr_A SSFS6; structural genom 42.0 1.7E+02 0.0059 26.4 10.4 54 126-188 13-69 (398)
162 3llv_A Exopolyphosphatase-rela 41.5 46 0.0016 25.9 5.5 69 128-211 6-77 (141)
163 3nkl_A UDP-D-quinovosamine 4-d 41.2 1.2E+02 0.0042 23.4 8.5 60 126-188 2-72 (141)
164 3c85_A Putative glutathione-re 40.2 48 0.0016 27.1 5.7 71 127-211 38-112 (183)
165 2yfk_A Aspartate/ornithine car 39.4 1.4E+02 0.0047 29.2 9.6 26 244-271 309-335 (418)
166 2hma_A Probable tRNA (5-methyl 39.2 41 0.0014 32.1 5.7 57 127-188 8-77 (376)
167 3oti_A CALG3; calicheamicin, T 39.1 93 0.0032 28.4 8.0 53 126-188 18-73 (398)
168 3hbm_A UDP-sugar hydrolase; PS 38.9 56 0.0019 29.8 6.4 73 129-215 1-80 (282)
169 2j5a_A 30S ribosomal protein S 37.9 99 0.0034 24.3 7.0 60 44-106 12-86 (110)
170 2bjd_A Acylphosphatase; hypert 37.7 73 0.0025 24.8 6.0 58 101-162 28-85 (101)
171 1lss_A TRK system potassium up 37.4 76 0.0026 24.0 6.2 71 128-211 4-76 (140)
172 3trg_A Acylphosphatase; fatty 37.2 73 0.0025 24.7 5.9 58 102-163 27-84 (98)
173 1urr_A CG18505 protein; acylph 37.1 96 0.0033 24.0 6.7 58 102-163 26-84 (102)
174 3tnj_A Universal stress protei 36.7 80 0.0027 24.3 6.3 42 173-215 76-120 (150)
175 1cqm_A Ribosomal protein S6; a 36.4 1.2E+02 0.004 23.4 7.1 41 52-93 19-68 (101)
176 3r8n_F 30S ribosomal protein S 36.4 34 0.0012 26.6 3.9 55 50-107 16-79 (100)
177 3jvi_A Protein tyrosine phosph 36.1 78 0.0027 26.4 6.4 81 127-213 3-92 (161)
178 3oj0_A Glutr, glutamyl-tRNA re 36.0 56 0.0019 25.7 5.3 69 128-213 21-89 (144)
179 3l4b_C TRKA K+ channel protien 35.8 41 0.0014 28.5 4.7 70 129-211 1-72 (218)
180 1rlg_A 50S ribosomal protein L 35.8 68 0.0023 25.4 5.7 58 134-202 28-86 (119)
181 3bl5_A Queuosine biosynthesis 35.4 85 0.0029 26.3 6.7 56 128-188 3-63 (219)
182 3t38_A Arsenate reductase; low 35.3 1.3E+02 0.0045 26.5 8.0 84 125-215 78-164 (213)
183 2lbw_A H/ACA ribonucleoprotein 34.7 42 0.0014 26.9 4.3 50 134-189 21-71 (121)
184 3oqb_A Oxidoreductase; structu 34.5 43 0.0015 31.0 5.0 73 126-212 4-91 (383)
185 2gv1_A Probable acylphosphatas 34.1 1E+02 0.0034 23.4 6.2 55 104-162 21-76 (92)
186 2ale_A SNU13, NHP2/L7AE family 33.2 55 0.0019 26.9 4.8 50 134-189 33-83 (134)
187 3ic5_A Putative saccharopine d 32.4 1.4E+02 0.0049 21.6 8.3 73 127-212 4-77 (118)
188 1xbi_A 50S ribosomal protein L 32.4 59 0.002 25.9 4.8 58 134-202 30-88 (120)
189 3l9w_A Glutathione-regulated p 32.2 55 0.0019 31.5 5.4 51 127-188 3-54 (413)
190 2y1e_A 1-deoxy-D-xylulose 5-ph 32.1 81 0.0028 30.8 6.5 80 126-211 19-112 (398)
191 3ia7_A CALG4; glycosysltransfe 32.1 2.1E+02 0.0073 25.5 9.2 51 129-188 5-58 (402)
192 2cdq_A Aspartokinase; aspartat 31.9 1E+02 0.0035 30.7 7.5 36 41-76 340-378 (510)
193 3ecs_A Translation initiation 31.8 1.3E+02 0.0046 28.1 7.9 72 132-211 124-196 (315)
194 4dio_A NAD(P) transhydrogenase 31.7 1.1E+02 0.0038 29.7 7.5 75 127-212 189-283 (405)
195 2fc3_A 50S ribosomal protein L 31.5 72 0.0025 25.5 5.2 58 134-202 29-87 (124)
196 3m2t_A Probable dehydrogenase; 31.4 33 0.0011 31.8 3.6 34 127-164 4-39 (359)
197 1vq8_F 50S ribosomal protein L 31.3 68 0.0023 25.4 5.0 50 134-189 30-80 (120)
198 1f0k_A MURG, UDP-N-acetylgluco 31.2 1.4E+02 0.0047 26.4 7.6 78 128-212 6-104 (364)
199 3n8i_A Low molecular weight ph 31.2 93 0.0032 25.9 6.1 82 127-214 4-94 (157)
200 2g1u_A Hypothetical protein TM 31.0 34 0.0012 27.4 3.2 76 123-212 14-92 (155)
201 3h4t_A Glycosyltransferase GTF 30.8 2.5E+02 0.0085 25.8 9.6 51 129-188 1-54 (404)
202 2pjk_A 178AA long hypothetical 30.7 76 0.0026 26.9 5.5 75 125-215 12-92 (178)
203 3j21_Z 50S ribosomal protein L 30.6 43 0.0015 25.7 3.6 48 134-187 16-63 (99)
204 3luc_A Protein argonaute-2; MI 30.4 1.6E+02 0.0055 23.6 7.3 81 99-188 30-111 (138)
205 3o74_A Fructose transport syst 30.4 2.2E+02 0.0075 23.8 8.5 73 99-189 17-90 (272)
206 2vh7_A Acylphosphatase-1; hydr 30.4 1.1E+02 0.0039 23.4 6.1 57 102-162 23-80 (99)
207 3bio_A Oxidoreductase, GFO/IDH 30.3 48 0.0016 30.2 4.5 34 127-164 8-42 (304)
208 3keo_A Redox-sensing transcrip 30.2 1.1E+02 0.0036 27.1 6.5 100 96-211 43-155 (212)
209 2xzm_U Ribosomal protein L7AE 29.6 68 0.0023 26.0 4.8 49 134-189 25-75 (126)
210 3mt0_A Uncharacterized protein 29.4 93 0.0032 27.2 6.1 69 173-264 204-276 (290)
211 4f11_A Gamma-aminobutyric acid 29.2 2.2E+02 0.0076 26.0 8.9 122 43-188 85-213 (433)
212 3o85_A Ribosomal protein L7AE; 29.1 68 0.0023 25.7 4.7 50 134-189 32-82 (122)
213 3on1_A BH2414 protein; structu 28.9 32 0.0011 26.5 2.5 49 134-188 19-67 (101)
214 3v7q_A Probable ribosomal prot 28.1 39 0.0013 26.1 2.9 49 134-188 20-68 (101)
215 3qk7_A Transcriptional regulat 28.1 1.8E+02 0.0063 25.0 7.8 72 99-189 25-96 (294)
216 3beo_A UDP-N-acetylglucosamine 27.8 3.1E+02 0.011 24.1 10.2 82 127-212 7-103 (375)
217 3gt0_A Pyrroline-5-carboxylate 27.7 30 0.001 30.1 2.5 68 128-212 2-71 (247)
218 3d4o_A Dipicolinate synthase s 27.7 3.1E+02 0.011 24.3 9.5 106 127-284 154-260 (293)
219 2glx_A 1,5-anhydro-D-fructose 27.5 79 0.0027 28.4 5.4 47 129-183 1-48 (332)
220 2e18_A NH(3)-dependent NAD(+) 27.5 1.9E+02 0.0064 25.3 7.8 58 128-188 22-82 (257)
221 3o9z_A Lipopolysaccaride biosy 27.2 1.1E+02 0.0036 27.9 6.2 34 127-165 2-37 (312)
222 3qhp_A Type 1 capsular polysac 27.0 2.2E+02 0.0074 22.0 8.4 80 129-213 3-83 (166)
223 1sur_A PAPS reductase; assimil 26.9 73 0.0025 27.1 4.8 55 129-188 45-104 (215)
224 3okp_A GDP-mannose-dependent a 26.9 1.6E+02 0.0054 26.1 7.2 78 127-211 3-93 (394)
225 3p52_A NH(3)-dependent NAD(+) 26.8 2.4E+02 0.0081 25.0 8.4 78 98-188 5-87 (249)
226 3i1m_F 30S ribosomal protein S 26.8 71 0.0024 26.4 4.4 54 50-106 16-78 (135)
227 2ahr_A Putative pyrroline carb 26.6 46 0.0016 28.9 3.5 66 128-213 3-69 (259)
228 3d1l_A Putative NADP oxidoredu 26.3 36 0.0012 29.7 2.7 66 128-212 10-76 (266)
229 3c1a_A Putative oxidoreductase 26.2 39 0.0013 30.5 3.0 38 123-165 5-44 (315)
230 2ywb_A GMP synthase [glutamine 26.1 1.6E+02 0.0054 29.0 7.6 56 129-189 210-270 (503)
231 2ioj_A Hypothetical protein AF 25.9 54 0.0018 26.2 3.5 33 157-189 74-106 (139)
232 3lab_A Putative KDPG (2-keto-3 25.7 3.5E+02 0.012 23.9 10.7 117 43-209 14-137 (217)
233 1tdj_A Biosynthetic threonine 25.4 53 0.0018 32.9 4.0 34 41-76 337-370 (514)
234 2iya_A OLEI, oleandomycin glyc 25.4 3.9E+02 0.013 24.3 10.5 53 127-188 11-66 (424)
235 1xng_A NH(3)-dependent NAD(+) 25.0 2.1E+02 0.0071 25.3 7.6 57 128-188 25-86 (268)
236 2h78_A Hibadh, 3-hydroxyisobut 24.5 89 0.003 27.7 5.1 63 128-211 3-66 (302)
237 3by5_A Cobalamin biosynthesis 24.4 1.3E+02 0.0044 25.4 5.7 57 130-188 11-71 (155)
238 2aif_A Ribosomal protein L7A; 24.2 72 0.0025 26.0 4.0 19 171-189 74-92 (135)
239 3r5t_A Ferric vibriobactin ABC 24.0 2.1E+02 0.0071 25.4 7.5 76 125-213 20-95 (305)
240 2iyf_A OLED, oleandomycin glyc 23.8 2.8E+02 0.0096 25.2 8.5 52 128-188 7-61 (430)
241 2lxf_A Uncharacterized protein 23.8 1.2E+02 0.0042 24.5 5.3 57 103-163 50-106 (121)
242 2czc_A Glyceraldehyde-3-phosph 23.4 1.7E+02 0.006 26.9 7.0 50 128-185 2-52 (334)
243 3iz5_f 60S ribosomal protein L 23.4 45 0.0015 26.6 2.5 48 134-187 27-74 (112)
244 3tri_A Pyrroline-5-carboxylate 23.3 1E+02 0.0036 27.5 5.3 69 128-213 3-72 (280)
245 3i23_A Oxidoreductase, GFO/IDH 23.3 70 0.0024 29.3 4.2 45 128-182 2-48 (349)
246 1p8a_A Protein tyrosine phosph 23.2 84 0.0029 25.5 4.3 82 127-213 3-88 (146)
247 3upl_A Oxidoreductase; rossman 23.1 3.1E+02 0.011 26.9 9.0 64 97-181 5-70 (446)
248 3hdj_A Probable ornithine cycl 23.0 3.9E+02 0.013 24.4 9.3 102 127-274 120-223 (313)
249 1u2p_A Ptpase, low molecular w 23.0 1.4E+02 0.0047 24.7 5.6 80 127-213 3-91 (163)
250 2vt3_A REX, redox-sensing tran 22.7 92 0.0031 27.4 4.7 117 62-211 25-152 (215)
251 2xw6_A MGS, methylglyoxal synt 22.7 1.1E+02 0.0037 25.3 4.8 34 39-73 2-37 (134)
252 3t7c_A Carveol dehydrogenase; 22.7 2.3E+02 0.008 25.0 7.6 75 34-114 20-116 (299)
253 1vl2_A Argininosuccinate synth 22.6 1.4E+02 0.0049 29.1 6.4 60 125-189 11-74 (421)
254 3bbn_F Ribosomal protein S6; s 22.4 3E+02 0.01 23.6 7.8 61 44-107 67-150 (168)
255 4g65_A TRK system potassium up 22.4 79 0.0027 30.8 4.6 71 127-211 2-75 (461)
256 1y5e_A Molybdenum cofactor bio 22.2 1.6E+02 0.0055 24.4 6.0 67 127-215 12-83 (169)
257 1w41_A 50S ribosomal protein L 22.1 51 0.0017 25.3 2.5 48 134-187 17-64 (101)
258 2wmy_A WZB, putative acid phos 21.9 1.5E+02 0.0051 24.2 5.6 81 128-214 8-91 (150)
259 1vgv_A UDP-N-acetylglucosamine 21.8 3.2E+02 0.011 24.1 8.3 80 129-212 1-94 (384)
260 1q0q_A 1-deoxy-D-xylulose 5-ph 21.8 3.1E+02 0.011 26.8 8.5 58 126-189 7-66 (406)
261 1tq8_A Hypothetical protein RV 21.6 3E+02 0.01 21.7 8.8 41 174-215 87-130 (163)
262 3au8_A 1-deoxy-D-xylulose 5-ph 21.4 2.3E+02 0.008 28.3 7.7 62 125-189 74-137 (488)
263 1id1_A Putative potassium chan 21.4 2E+02 0.0068 22.6 6.2 72 128-211 3-78 (153)
264 2r6j_A Eugenol synthase 1; phe 21.4 2.8E+02 0.0095 24.2 7.7 75 128-213 11-88 (318)
265 1zzg_A Glucose-6-phosphate iso 21.0 83 0.0029 30.6 4.4 58 128-189 116-182 (415)
266 2ixa_A Alpha-N-acetylgalactosa 20.8 3.8E+02 0.013 25.3 9.0 74 127-212 19-99 (444)
267 3e82_A Putative oxidoreductase 20.7 2.3E+02 0.0079 26.0 7.3 36 126-165 5-42 (364)
268 2nzc_A Hypothetical protein; s 20.6 2.9E+02 0.0099 21.1 6.7 68 38-115 3-71 (86)
269 3pdi_A Nitrogenase MOFE cofact 20.5 2.3E+02 0.0078 27.7 7.5 161 42-214 203-411 (483)
270 3jyw_G 60S ribosomal protein L 20.4 66 0.0023 25.8 2.9 49 134-190 26-77 (113)
271 3s40_A Diacylglycerol kinase; 20.3 2.7E+02 0.0092 25.0 7.5 12 126-137 6-17 (304)
272 4dll_A 2-hydroxy-3-oxopropiona 20.2 1.4E+02 0.0049 27.0 5.6 64 127-211 30-94 (320)
No 1
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=100.00 E-value=2.6e-66 Score=492.44 Aligned_cols=247 Identities=33% Similarity=0.584 Sum_probs=222.7
Q ss_pred CCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeC--CCCCChHHHHHHHHHHHHHh
Q 020794 36 VSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFD--PIKWPREQMDEDFFKLSKMF 113 (321)
Q Consensus 36 ~~~~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~--~~~~~~~~L~~~L~~la~~l 113 (321)
|+...++++||++||||+||||+||++|+++||||+|++|+.+..+|.||||++++.+ +...+.++|+++|+++++++
T Consensus 4 ~~~~~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~la~~~ 83 (292)
T 3lou_A 4 VPQRPHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPIAERF 83 (292)
T ss_dssp ----CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHHHHHH
T ss_pred CcCCCCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHHHHhc
Confidence 5556678999999999999999999999999999999999988889999999999987 43468999999999999999
Q ss_pred hhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcch
Q 020794 114 NAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE 193 (321)
Q Consensus 114 g~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~ 193 (321)
+| .|++.+.++++||+||+||+||||++||++++.|+++++|++|+||+++ +..+|+++|||+++++.+...
T Consensus 84 ~m---~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-----~~~~A~~~gIp~~~~~~~~~~ 155 (292)
T 3lou_A 84 RM---QWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPD-----FAPLAAQHGLPFRHFPITADT 155 (292)
T ss_dssp TC---EEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSST-----THHHHHHTTCCEEECCCCSSC
T ss_pred Cc---EEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcHH-----HHHHHHHcCCCEEEeCCCcCC
Confidence 86 3667777889999999999999999999999999999999999999953 356799999999988743222
Q ss_pred ---hHHHHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCC
Q 020794 194 ---REEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLP 268 (321)
Q Consensus 194 ---~~~~~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP 268 (321)
.++++++.++ ++|++|+||||| |||+++++.|++++||+||||||
T Consensus 156 r~~~~~~~~~~l~~~~~Dlivla~y~~------------------------------il~~~~l~~~~~~~iNiHpSlLP 205 (292)
T 3lou_A 156 KAQQEAQWLDVFETSGAELVILARYMQ------------------------------VLSPEASARLANRAINIHHSFLP 205 (292)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHhCCCEEEecCchh------------------------------hCCHHHHhhhcCCeEEeCCCcCc
Confidence 2457888886 899999999999 99999999999999999999999
Q ss_pred CCCCChHHHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 269 SFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 269 ~yrG~~pi~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
+|||++|++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 206 ~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q~~v~i~~~dt~~~L 257 (292)
T 3lou_A 206 GFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQVVERVDHSYRPEQL 257 (292)
T ss_dssp CCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred CCCCccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEEEEEEcCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999987
No 2
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=100.00 E-value=2.9e-66 Score=494.12 Aligned_cols=243 Identities=42% Similarity=0.638 Sum_probs=224.7
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhccce
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~~ 119 (321)
+++++||++||||+||||+||++|+++||||+|++|++++.+|.||||++++.++...+.++|+++|++++++++| .
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~la~~l~m---~ 96 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPIAEEFSM---D 96 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHHHHHHTC---E
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHHHHHhCC---e
Confidence 5679999999999999999999999999999999999988899999999999986557899999999999999986 3
Q ss_pred eeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCC-cc--hhHH
Q 020794 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-EN--EREE 196 (321)
Q Consensus 120 ~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~--~~~~ 196 (321)
|++.+.++++||+||+||+|+||++||++++.|+++++|++|+||+++ +.++|+++|||++.++.+ .+ ..++
T Consensus 97 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~-----~~~~A~~~gIp~~~~~~~~~~r~~~~~ 171 (302)
T 3o1l_A 97 WRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQD-----LRSMVEWHDIPYYHVPVDPKDKEPAFA 171 (302)
T ss_dssp EEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSST-----THHHHHTTTCCEEECCCCSSCCHHHHH
T ss_pred eeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHH-----HHHHHHHcCCCEEEcCCCcCCHHHHHH
Confidence 666777889999999999999999999999999999999999999853 467899999999988642 22 2346
Q ss_pred HHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCh
Q 020794 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (321)
Q Consensus 197 ~~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~ 274 (321)
+++++++ ++|++|+||||| |||++|++.|++++||+||||||+|||++
T Consensus 172 ~~~~~l~~~~~DliVlagym~------------------------------IL~~~~l~~~~~~~INiHpSlLP~frG~~ 221 (302)
T 3o1l_A 172 EVSRLVGHHQADVVVLARYMQ------------------------------ILPPQLCREYAHQVINIHHSFLPSFVGAK 221 (302)
T ss_dssp HHHHHHHHTTCSEEEESSCCS------------------------------CCCTTHHHHTTTCEEEEESSCTTSSCSSC
T ss_pred HHHHHHHHhCCCEEEHhHhhh------------------------------hcCHHHHhhhhCCeEEeCcccccCCCCcc
Confidence 7888886 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 275 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 275 pi~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
|++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 222 p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q~~v~I~~~dt~~~L 267 (302)
T 3o1l_A 222 PYHQASLRGVKLIGATCHYVTEELDAGPIIEQDVVRVSHRDSIENM 267 (302)
T ss_dssp HHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred HHHHHHHcCCCeEEEEEEEECCCCcCCCeEEEEEEecCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999987
No 3
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=100.00 E-value=5.7e-66 Score=488.73 Aligned_cols=243 Identities=31% Similarity=0.552 Sum_probs=223.8
Q ss_pred CcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhccc
Q 020794 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (321)
Q Consensus 39 ~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~ 118 (321)
.+++++||++|+||+||||+||++|+++||||+|++|+.+..+|.||||++++.++ ..+.++|+++|++++++++|
T Consensus 5 ~~~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~~~~~~L~~~f~~la~~l~m--- 80 (286)
T 3n0v_A 5 APDTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-DFDEAGFRAGLAERSEAFGM--- 80 (286)
T ss_dssp --CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-SCCHHHHHHHHHHHHGGGTC---
T ss_pred cCCcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-CCCHHHHHHHHHHHHHHcCC---
Confidence 35679999999999999999999999999999999999888899999999999986 57899999999999999986
Q ss_pred eeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcch---hH
Q 020794 119 VVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE---RE 195 (321)
Q Consensus 119 ~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~---~~ 195 (321)
.|++.+.++++||+||+||+||||++||++++.|+++++|++|+||+++ +..+|+++|||+++++.+... .+
T Consensus 81 ~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-----~~~~A~~~gIp~~~~~~~~~~r~~~~ 155 (286)
T 3n0v_A 81 AFELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHPD-----LEPLAHWHKIPYYHFALDPKDKPGQE 155 (286)
T ss_dssp EEEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSST-----THHHHHHTTCCEEECCCBTTBHHHHH
T ss_pred EEEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcHH-----HHHHHHHcCCCEEEeCCCcCCHHHHH
Confidence 3667778889999999999999999999999999999999999999953 457799999999988743222 24
Q ss_pred HHHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 196 EELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 196 ~~~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
++++++++ ++|++|+||||| |||+++++.|++++||+||||||+|||+
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~ 205 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYMQ------------------------------VLSPELCRRLDGWAINIHHSLLPGFKGA 205 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEECSSTTCCCS
T ss_pred HHHHHHHHhcCCCEEEeccccc------------------------------ccCHHHHhhhcCCeEEeccccccCCCCc
Confidence 57888886 899999999999 9999999999999999999999999999
Q ss_pred hHHHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 274 KPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 274 ~pi~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
+|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 206 ~p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q~~~~i~~~dt~~~L 252 (286)
T 3n0v_A 206 KPYHQAYNKGVKMVGATAHYINNDLDEGPIIAQGVEVVDHSHYPEDL 252 (286)
T ss_dssp CHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred cHHHHHHHcCCCeEEEEEEEEcCCCCCCceeEEEEEEcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999987
No 4
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.4e-66 Score=488.36 Aligned_cols=243 Identities=36% Similarity=0.595 Sum_probs=223.9
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhcccee
Q 020794 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (321)
Q Consensus 41 ~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~~~ 120 (321)
.+++||++|+||+||||+||++|+++||||+|++|+.+..+|.||||+++++++...+.++|+++|++++++++| .|
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~L~~~f~~la~~~~m---~~ 81 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIAAKFTM---GW 81 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHHHHTTC---EE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHHcCC---EE
Confidence 469999999999999999999999999999999999888899999999999987667899999999999999986 36
Q ss_pred eeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcch---hHHH
Q 020794 121 RVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE---REEE 197 (321)
Q Consensus 121 r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~---~~~~ 197 (321)
++.+.++++|||||+||+||||++||++++.|+++++|++|+||++. .+.++|+++|||+++++.+... .+++
T Consensus 82 ~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~----~~~~~A~~~gIp~~~~~~~~~~r~~~~~~ 157 (288)
T 3obi_A 82 HMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPR----ETFSGFDFGDIPFYHFPVNKDTRRQQEAA 157 (288)
T ss_dssp EEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCG----GGSCCTTTTTCCEEECCCCTTTHHHHHHH
T ss_pred EeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCCh----hHHHHHHHcCCCEEEeCCCcccHHHHHHH
Confidence 67777889999999999999999999999999999999999999831 2567899999999998753222 2457
Q ss_pred HHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChH
Q 020794 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (321)
Q Consensus 198 ~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p 275 (321)
++++++ ++|++|+||||| |||++|++.|++++||+||||||+|||++|
T Consensus 158 ~~~~l~~~~~Dlivlagy~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~~p 207 (288)
T 3obi_A 158 ITALIAQTHTDLVVLARYMQ------------------------------ILSDEMSARLAGRCINIHHSFLPGFKGAKP 207 (288)
T ss_dssp HHHHHHHHTCCEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEEECSSCCCSSCH
T ss_pred HHHHHHhcCCCEEEhhhhhh------------------------------hCCHHHHhhhcCCeEEeCcccccCCCCchH
Confidence 888886 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 276 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 276 i~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 208 ~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q~~v~i~~~dt~~~L 252 (288)
T 3obi_A 208 YHQAFDRGVKLIGATAHYVTSALDEGPIIDQDVERISHRDTPADL 252 (288)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred HHHHHHcCCCEEEEEEEEECCCCcCCCeEEEEEEecCCCCCHHHH
Confidence 999999999999999999999999999999999999999999987
No 5
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=7.6e-66 Score=488.09 Aligned_cols=242 Identities=37% Similarity=0.569 Sum_probs=220.8
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhccce
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~~ 119 (321)
.++++||++||||+||||+||++|+++||||+|++|+.+..+|.||||++++.+. .+.++|+++|++++++++| .
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~--~~~~~L~~~f~~la~~~~m---~ 79 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV--AGVNDFNSAFGKVVEKYNA---E 79 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC-----CHHHHHHHHHHGGGTC---E
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC--CCHHHHHHHHHHHHHHcCC---e
Confidence 4579999999999999999999999999999999999888899999999999875 3567999999999999986 3
Q ss_pred eeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcch---hHH
Q 020794 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE---REE 196 (321)
Q Consensus 120 ~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~---~~~ 196 (321)
|++.+.++++||+||+||+||||++||++++.|+++++|++|+||+++ + +.++|+++|||+++++.+... .++
T Consensus 80 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~~---a-~~~~A~~~gIp~~~~~~~~~~r~~~~~ 155 (287)
T 3nrb_A 80 WWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPR---E-ALSVSLVGDIPFHYLPVTPATKAAQES 155 (287)
T ss_dssp EEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSCG---G-GCCCCCCTTSCEEECCCCGGGHHHHHH
T ss_pred eEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCChH---H-HHHHHHHcCCCEEEEeccCcchhhHHH
Confidence 667777889999999999999999999999999999999999999953 2 677899999999998753222 245
Q ss_pred HHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCh
Q 020794 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (321)
Q Consensus 197 ~~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~ 274 (321)
+++++++ ++|++|+||||| |||++|++.|++++||+||||||+|||++
T Consensus 156 ~~~~~l~~~~~Dlivlagym~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~~ 205 (287)
T 3nrb_A 156 QIKNIVTQSQADLIVLARYMQ------------------------------ILSDDLSAFLSGRCINIHHSFLPGFKGAK 205 (287)
T ss_dssp HHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHHTTSEEEEESSCTTTTCSSC
T ss_pred HHHHHHHHhCCCEEEhhhhhh------------------------------hcCHHHHhhccCCeEEECcccccCCCCch
Confidence 7888886 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 275 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 275 pi~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
|++||+++|++.+|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 206 p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q~~v~i~~~dt~~~L 251 (287)
T 3nrb_A 206 PYHQAHTRGVKLIGATAHFVTADLDEGPIIAQDVEHVSHRDSAEDL 251 (287)
T ss_dssp HHHHHHHHTCSEEEEEEEECCSSSSCCCEEEEEEEECCTTCCHHHH
T ss_pred HHHHHHHcCCCeEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999987
No 6
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=100.00 E-value=7.2e-44 Score=324.55 Aligned_cols=160 Identities=32% Similarity=0.510 Sum_probs=147.8
Q ss_pred CeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc-chh---HHHHHHHhc
Q 020794 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELVQ 203 (321)
Q Consensus 128 ~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~~~l~ 203 (321)
++|||||+||+|+||++|+++++.|.++++|++|+||++ +++++++|+++|||+++++.+. +.+ ++++.+.++
T Consensus 2 m~riavl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~~---~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 78 (211)
T 3p9x_A 2 MKRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKP---GAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLK 78 (211)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESCS---SSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECCC---CcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHH
Confidence 479999999999999999999999999999999999984 5799999999999999876431 222 467888886
Q ss_pred --CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHHH
Q 020794 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 281 (321)
Q Consensus 204 --~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai~ 281 (321)
++|++|++|||+ |||+++++.++.++||+||||||+|||++|++||+.
T Consensus 79 ~~~~Dliv~agy~~------------------------------Il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 128 (211)
T 3p9x_A 79 EKQIDFVVLAGYMR------------------------------LVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIR 128 (211)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHHHHTTSEEEEESSCTTSSCSSCHHHHHHH
T ss_pred hcCCCEEEEeCchh------------------------------hcCHHHHhhccCCeEEECCccCCCCCCccHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 282 AGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 282 ~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 129 ~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L 167 (211)
T 3p9x_A 129 ANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETL 167 (211)
T ss_dssp TTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHH
T ss_pred cCCCeEEEEEEEEcCCCCCCCEEEEEEEecCCCCCHHHH
Confidence 999999999999999999999999999999999999987
No 7
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=100.00 E-value=1.2e-43 Score=323.88 Aligned_cols=161 Identities=35% Similarity=0.523 Sum_probs=147.8
Q ss_pred CCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc--
Q 020794 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (321)
Q Consensus 126 ~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (321)
++++||+||+||+|+|+++++++++++.++++|++|+||++ ++..+++|+++|||++.++.+. .+++++.+.++
T Consensus 6 ~~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~---~a~~l~~A~~~gIp~~~~~~~~-~~~~~~~~~L~~~ 81 (215)
T 3kcq_A 6 KKELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNA---EARGLLIAQSYGIPTFVVKRKP-LDIEHISTVLREH 81 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCT---TCTHHHHHHHTTCCEEECCBTT-BCHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCc---chHHHHHHHHcCCCEEEeCccc-CChHHHHHHHHHh
Confidence 46789999999999999999999999999999999999984 4567899999999999876532 23467888886
Q ss_pred CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHHHhC
Q 020794 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAG 283 (321)
Q Consensus 204 ~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai~~G 283 (321)
++|++|++|||+ |||+++++.|++++||+||||||+|||++|++||+.+|
T Consensus 82 ~~Dlivlagy~~------------------------------IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G 131 (215)
T 3kcq_A 82 DVDLVCLAGFMS------------------------------ILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAG 131 (215)
T ss_dssp TCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHT
T ss_pred CCCEEEEeCCce------------------------------EeCHHHHhhccCCeEEECcccccCCCCccHHHHHHHcC
Confidence 899999999999 99999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 284 VKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 284 ~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 132 ~~~tGvTvh~v~~~lD~G~Ii~Q~~v~I~~~dt~~~L 168 (215)
T 3kcq_A 132 VKIAGCTLHYVYQELDAGPIIMQAAVPVLREDTAESL 168 (215)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCEEEEEEeecCCCCCHHHH
Confidence 9999999999999999999999999999999999987
No 8
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=100.00 E-value=1.3e-43 Score=322.37 Aligned_cols=161 Identities=31% Similarity=0.509 Sum_probs=146.5
Q ss_pred CCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc-chh---HHHHHHHh
Q 020794 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELV 202 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~~~l 202 (321)
.|+||+||+||+|+||++|+++++++.++++|++|+||++ ++.++++|+++|||++.++.+. ..+ ++++.+.+
T Consensus 6 ~~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~---~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l 82 (209)
T 4ds3_A 6 KRNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKA---EAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAAL 82 (209)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCT---TCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCc---ccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999984 4567899999999999877432 122 46788888
Q ss_pred c--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHH
Q 020794 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAF 280 (321)
Q Consensus 203 ~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai 280 (321)
+ ++|++|++|||+ |||++|++.|++++||+||||||+|||++|++||+
T Consensus 83 ~~~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai 132 (209)
T 4ds3_A 83 DVLKPDIICLAGYMR------------------------------LLSGRFIAPYEGRILNIHPSLLPLFPGLHTHQRAL 132 (209)
T ss_dssp HHHCCSEEEESSCCS------------------------------CCCHHHHGGGTTCEEEEESSCTTSSCSSCHHHHHH
T ss_pred HhcCCCEEEEecccc------------------------------CcCHHHHhhccCCeEEECCccccCCCChhHHHHHH
Confidence 6 899999999999 99999999999999999999999999999999999
Q ss_pred HhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 281 DAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 281 ~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 133 ~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L 172 (209)
T 4ds3_A 133 DAGMKLAGCTVHLVTEGMDEGPILAQAAVPVLDGDTAETL 172 (209)
T ss_dssp HTTCSEEEEEEEECCC--CCCCEEEEEEEECCTTCCHHHH
T ss_pred HcCCCeEEEEEEEEcCCCCCCCeEEEEEEecCCCCCHHHH
Confidence 9999999999999999999999999999999999999987
No 9
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=100.00 E-value=1.5e-43 Score=323.12 Aligned_cols=161 Identities=32% Similarity=0.481 Sum_probs=147.0
Q ss_pred CCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc-chh---HHHHHHH
Q 020794 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLEL 201 (321)
Q Consensus 126 ~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~~~ 201 (321)
.+++|||||+||+|+||++|++++++| ++++|++|+||++ ++..+++|+++|||++.++.+. ..+ ++++.+.
T Consensus 3 ~~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~~---~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~ 78 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNRA---DAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKT 78 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESCT---TCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCCc---chHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHH
Confidence 467899999999999999999999999 9999999999985 4678999999999999876432 122 4678888
Q ss_pred hc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHH
Q 020794 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQA 279 (321)
Q Consensus 202 l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~A 279 (321)
++ ++|++|++|||+ |||+++++.|+.++||+||||||+|||++|++||
T Consensus 79 l~~~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~A 128 (215)
T 3tqr_A 79 IDHYDPKLIVLAGFMR------------------------------KLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERA 128 (215)
T ss_dssp HHTTCCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSSTTTTCSSCHHHHH
T ss_pred HHhcCCCEEEEccchh------------------------------hCCHHHHhhccCCeEEeCcccCCCCCChhHHHHH
Confidence 86 899999999999 9999999999999999999999999999999999
Q ss_pred HHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 280 FDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 280 i~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 129 i~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L 169 (215)
T 3tqr_A 129 LAAGETEHGVSVHYVTEDLDAGPLICQARLSITPQDTPETL 169 (215)
T ss_dssp HHTTCSEEEEEEEECC-CTTCSCEEEEEEEECCTTCCHHHH
T ss_pred HHcCCCeEEEEEEEEcCCCCCCCEEEEEEEecCCCCCHHHH
Confidence 99999999999999999999999999999999999999987
No 10
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=100.00 E-value=4.8e-43 Score=319.85 Aligned_cols=162 Identities=25% Similarity=0.358 Sum_probs=147.4
Q ss_pred CCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc-chh---HHHHH
Q 020794 124 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELL 199 (321)
Q Consensus 124 ~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~ 199 (321)
..++++||+||+||+|+||++|+++++. .++++|++|+||++ ++++++|+++|||++..+.+. ..+ ++++.
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~all~~~~~-~~~~eI~~Vis~~~----a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~ 82 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSLLDAAVG-DYPARVVAVGVDRE----CRAAEIAAEASVPVFTVRLADHPSRDAWDVAIT 82 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHHHHHSST-TCSEEEEEEEESSC----CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHH
T ss_pred CCCCCcEEEEEEeCChHHHHHHHHHHhc-cCCCeEEEEEeCCc----hHHHHHHHHcCCCEEEeCcccccchhhhhHHHH
Confidence 3467899999999999999999999865 67899999999984 578999999999999876432 112 46788
Q ss_pred HHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHH
Q 020794 200 ELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277 (321)
Q Consensus 200 ~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~ 277 (321)
+.++ ++|++|++|||+ |||++|++.|++++||+||||||+|||++|++
T Consensus 83 ~~l~~~~~Dlivlagy~~------------------------------iL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~ 132 (215)
T 3da8_A 83 AATAAHEPDLVVSAGFMR------------------------------ILGPQFLSRFYGRTLNTHPALLPAFPGTHGVA 132 (215)
T ss_dssp HHHHTTCCSEEEEEECCS------------------------------CCCHHHHHHHTTTEEEEESSCTTSSCSTTHHH
T ss_pred HHHHhhCCCEEEEcCchh------------------------------hCCHHHHhhccCCeEEeCcccccCCCCchHHH
Confidence 8886 899999999999 99999999999999999999999999999999
Q ss_pred HHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 278 QAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 278 ~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
||+.+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 133 ~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~~v~I~~~dt~~~L 175 (215)
T 3da8_A 133 DALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETL 175 (215)
T ss_dssp HHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHH
T ss_pred HHHHcCCCeEEEEEEEEcCCCCCCCEEEEEEeecCCCCCHHHH
Confidence 9999999999999999999999999999999999999999987
No 11
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=100.00 E-value=1.4e-42 Score=315.64 Aligned_cols=159 Identities=30% Similarity=0.473 Sum_probs=146.8
Q ss_pred eeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc-chh---HHHHHHHhc-
Q 020794 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELVQ- 203 (321)
Q Consensus 129 ~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~~~l~- 203 (321)
+||+||+||+|+||++|+++++++.++++|++|+|+++ ++.++++|+++|||++.++.+. +.+ ++++.+.++
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKA---DAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDM 77 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCT---TCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGG
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCC---chHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHh
Confidence 59999999999999999999999999999999999985 4678999999999999876322 222 467888886
Q ss_pred -CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHHHh
Q 020794 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 282 (321)
Q Consensus 204 -~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai~~ 282 (321)
++|++|++|||+ |||+++++.|+.++||+||||||+|||++|++||+.+
T Consensus 78 ~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~yrG~~pi~~ai~~ 127 (212)
T 1jkx_A 78 YAPDVVVLAGFMR------------------------------ILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALEN 127 (212)
T ss_dssp GCCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHT
T ss_pred cCCCEEEEeChhh------------------------------hCCHHHHhhccCCEEEEccCcccCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 283 GVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 283 G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 128 G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L 165 (212)
T 1jkx_A 128 GDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDI 165 (212)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred CCCceEEEEEEEcccccCCCEEEEEEEEcCCCCCHHHH
Confidence 99999999999999999999999999999999999987
No 12
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=100.00 E-value=1.7e-42 Score=314.56 Aligned_cols=159 Identities=34% Similarity=0.495 Sum_probs=143.1
Q ss_pred eeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCC-cchh---HHHHHHHhc-
Q 020794 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ- 203 (321)
Q Consensus 129 ~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~-~~~~---~~~~~~~l~- 203 (321)
+|||||+||+|+||++|+++++++.++++|++|+|+++ .+.++++|+++|||+++++.+ ...+ ++++.+.++
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKA---AVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEE 77 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESST---TCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCC---ChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHh
Confidence 59999999999999999999999988999999999985 457899999999999987642 1222 356777776
Q ss_pred -CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHHHh
Q 020794 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 282 (321)
Q Consensus 204 -~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai~~ 282 (321)
++|++|++|||+ |||+++++.|+.++||+||||||+|||++|++||+.+
T Consensus 78 ~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~ 127 (209)
T 1meo_A 78 FSIDIVCLAGFMR------------------------------ILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALET 127 (209)
T ss_dssp TTCCEEEEESCCS------------------------------CCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHH
T ss_pred cCCCEEEEcchhh------------------------------hCCHHHHhhhcCCEEEEccCcCcCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 283 GVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 283 G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 128 G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L 165 (209)
T 1meo_A 128 GVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATL 165 (209)
T ss_dssp TCSEEEEEEEECCC---CCCEEEEEEEECCTTCCHHHH
T ss_pred CCCcEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHH
Confidence 99999999999999999999999999999999999987
No 13
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=100.00 E-value=8.6e-42 Score=310.19 Aligned_cols=160 Identities=29% Similarity=0.521 Sum_probs=147.0
Q ss_pred CeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc-chh---HHHHHHHhc
Q 020794 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELVQ 203 (321)
Q Consensus 128 ~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~~~l~ 203 (321)
++||+||+||+|+|++++|+++.++.++++|++|+|+++ +++++++|+++|||++.++.+. +.+ ++++.+.++
T Consensus 3 m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~---~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~ 79 (212)
T 3av3_A 3 MKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRP---GAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELK 79 (212)
T ss_dssp CEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESST---TCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCC---CcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHH
Confidence 479999999999999999999999888899999999974 4689999999999999876432 222 457777776
Q ss_pred --CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHHH
Q 020794 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFD 281 (321)
Q Consensus 204 --~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai~ 281 (321)
++|++|++|||+ |||+++++.|++++||+||||||+|||++|++||+.
T Consensus 80 ~~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 129 (212)
T 3av3_A 80 GRQIDWIALAGYMR------------------------------LIGPTLLSAYEGKIVNIHPSLLPAFPGKDAIGQAYR 129 (212)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHHHTTTCEEEEESSCTTSSCSTTHHHHHHH
T ss_pred hcCCCEEEEchhhh------------------------------hCCHHHHhhhcCCEEEEecCcCCCCCCcCHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999
Q ss_pred hCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 282 AGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 282 ~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
+|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 130 ~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L 168 (212)
T 3av3_A 130 AGVSETGVTVHYVDEGMDTGPVIAQRVVPIVPGEPIEAL 168 (212)
T ss_dssp HTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHH
T ss_pred cCCCeEEEEEEEECCCCCCCCEEEEEEEecCCCCCHHHH
Confidence 999999999999999999999999999999999999987
No 14
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=100.00 E-value=8.7e-42 Score=313.95 Aligned_cols=166 Identities=31% Similarity=0.469 Sum_probs=150.6
Q ss_pred eCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc-chh---HHH
Q 020794 122 VPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEE 197 (321)
Q Consensus 122 ~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~ 197 (321)
+...++++||+||+||++++++++|+++.++.++++|++|+|+++ +++++++|+++|||++.++.+. +.+ +++
T Consensus 16 ~~~~~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~ 92 (229)
T 3auf_A 16 LYFQGHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRA---DAYGLERARRAGVDALHMDPAAYPSRTAFDAA 92 (229)
T ss_dssp SSCBTTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESST---TCHHHHHHHHTTCEEEECCGGGSSSHHHHHHH
T ss_pred ccccCCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCC---chHHHHHHHHcCCCEEEECcccccchhhccHH
Confidence 345567789999999999999999999998888899999999974 4688999999999999876422 222 467
Q ss_pred HHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChH
Q 020794 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (321)
Q Consensus 198 ~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p 275 (321)
+.+.++ ++|++|++|||+ |||++|++.|+.++||+||||||+|||++|
T Consensus 93 ~~~~l~~~~~Dliv~agy~~------------------------------IL~~~~l~~~~~~~iNiHpSLLP~yrG~~p 142 (229)
T 3auf_A 93 LAERLQAYGVDLVCLAGYMR------------------------------LVRGPMLTAFPNRILNIHPSLLPAFPGLEA 142 (229)
T ss_dssp HHHHHHHTTCSEEEESSCCS------------------------------CCCHHHHHHSTTCEEEEESSCTTSSCSSCH
T ss_pred HHHHHHhcCCCEEEEcChhH------------------------------hCCHHHHhhccCCEEEEccCcCcCCCCcCH
Confidence 778776 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 276 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 276 i~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
++|||++|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 143 i~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L 187 (229)
T 3auf_A 143 QRQALEHGVKVAGCTVHFVTAGVDEGPIILQAAVPVLEGDTVEDL 187 (229)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred HHHHHHcCCCeEEEEEEEECCCCcCCCEEEEEEEecCCCCCHHHH
Confidence 999999999999999999999999999999999999999999987
No 15
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=100.00 E-value=2.1e-41 Score=308.27 Aligned_cols=159 Identities=33% Similarity=0.502 Sum_probs=145.8
Q ss_pred eeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc-chh---HHHHHHHhc-
Q 020794 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELVQ- 203 (321)
Q Consensus 129 ~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~-~~~---~~~~~~~l~- 203 (321)
+||+||+||+|++++++|+++.++.++++|++|+|+++ ++.++++|+++|||++.++.+. +.+ ++++.+.++
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 78 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNP---KAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKK 78 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCT---TCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCC---ChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHh
Confidence 69999999999999999999988877889999999985 4678999999999999876432 222 457777776
Q ss_pred -CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHHHh
Q 020794 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDA 282 (321)
Q Consensus 204 -~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai~~ 282 (321)
++|++|++|||+ |||+++++.+++++||+||||||+|||++|++||+.+
T Consensus 79 ~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~ai~~ 128 (216)
T 2ywr_A 79 KGVELVVLAGFMR------------------------------ILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVEF 128 (216)
T ss_dssp TTCCEEEESSCCS------------------------------CCCHHHHTTSTTCEEEEESSCTTTTCSTTHHHHHHHH
T ss_pred cCCCEEEEeCchh------------------------------hCCHHHHhhccCCeEEEcCCcCcCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 283 GVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 283 G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
|++.+|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 129 G~~~tGvTvh~v~~~~D~G~Ii~q~~~~i~~~dt~~~L 166 (216)
T 2ywr_A 129 GVKFSGCTVHIVDESVDAGPVIVQAVVPVLPEDDENTL 166 (216)
T ss_dssp TCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHH
T ss_pred CCCeEEEEEEEEcccCCCCCEEEEEEEEcCCCCCHHHH
Confidence 99999999999999999999999999999999999987
No 16
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=100.00 E-value=4.7e-37 Score=293.82 Aligned_cols=155 Identities=23% Similarity=0.327 Sum_probs=138.3
Q ss_pred CCeeEEEEEeCC--chhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-------CchHHHHHHHcCCCEEEEcCCcchhHHH
Q 020794 127 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEE 197 (321)
Q Consensus 127 ~~~rIavl~S~~--g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (321)
++|||+||+|+. ..||++|++. | ++|++|+|+++++. .+++.++|+++|||++. +. +.++++
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~--~~~~~~ 72 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS---G---HNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQ-PV--SLRPQE 72 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT---T---CEEEEEECCCCBC------CBCCHHHHHHHHTTCCEEC-CS--CSCSHH
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC---C---CcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEe-cC--CCCCHH
Confidence 569999999998 5789999974 3 79999999976542 37899999999999874 32 223456
Q ss_pred HHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChH
Q 020794 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (321)
Q Consensus 198 ~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p 275 (321)
+.+.++ ++|++|+++||+ |||+++++.+++++||+||||||+|||++|
T Consensus 73 ~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~p 122 (314)
T 1fmt_A 73 NQQLVAELQADVMVVVAYGL------------------------------ILPKAVLEMPRLGCINVHGSLLPRWRGAAP 122 (314)
T ss_dssp HHHHHHHTTCSEEEEESCCS------------------------------CCCHHHHHSSTTCEEEEESSSTTTTBSSCH
T ss_pred HHHHHHhcCCCEEEEeeccc------------------------------cCCHHHHhhccCCEEEEcCCcCcCCCCcCH
Confidence 777775 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 276 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 276 i~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
++|||.+|++++|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 123 i~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L 167 (314)
T 1fmt_A 123 IQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTL 167 (314)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHH
T ss_pred HHHHHHcCCCceEEEEEEEcccCcCCCEEEEEEEecCCCCCHHHH
Confidence 999999999999999999999999999999999999999999987
No 17
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=100.00 E-value=5.1e-37 Score=292.40 Aligned_cols=153 Identities=22% Similarity=0.286 Sum_probs=136.3
Q ss_pred eeEEEEEeCC--chhHHHHHHhhhcCCcCeeEEEEEeCCCCCC----CchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 129 ~rIavl~S~~--g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~----~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
|||+||+|+. .+||++|++. .++|++|+|+++++. .+++.++|+++|||++..... +++++.+.+
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~------~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~---~~~~~~~~l 71 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV---NHPLWVERI 71 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCC---CSHHHHHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHC------CCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcC---CcHHHHHHH
Confidence 6999999998 6899999985 479999999987642 268999999999999875432 234566666
Q ss_pred c--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHH
Q 020794 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAF 280 (321)
Q Consensus 203 ~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai 280 (321)
+ ++|++|+++||+ |||+++++.++.++||+||||||+|||++|++|||
T Consensus 72 ~~~~~Dliv~~~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~ai 121 (305)
T 2bln_A 72 AQLSPDVIFSFYYRH------------------------------LIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVL 121 (305)
T ss_dssp HHTCCSEEEEESCCS------------------------------CCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHH
T ss_pred HhcCCCEEEEecccc------------------------------ccCHHHHhcCcCCEEEecCCcCcCCCCccHHHHHH
Confidence 5 899999999999 99999999999999999999999999999999999
Q ss_pred HhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 281 DAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 281 ~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
.+|++++|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 122 ~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L 161 (305)
T 2bln_A 122 VNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITL 161 (305)
T ss_dssp HTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred HcCCCcEEEEEEEECCCccCCCeEEEEEEecCCCCCHHHH
Confidence 9999999999999999999999999999999999999987
No 18
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=100.00 E-value=2.9e-36 Score=288.98 Aligned_cols=155 Identities=21% Similarity=0.292 Sum_probs=136.3
Q ss_pred CCeeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-------CchHHHHHHHcCCCEEEEcCCcchhHHH
Q 020794 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEE 197 (321)
Q Consensus 127 ~~~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (321)
+++||+||||+.. .||++|++. .++|++|+|+++++. .+++.++|+++|||++. +.+ .++++
T Consensus 6 ~~mrivf~Gt~~fa~~~L~~L~~~------~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~~--~~~~~ 76 (318)
T 3q0i_A 6 QSLRIVFAGTPDFAARHLAALLSS------EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQ-PEN--FKSDE 76 (318)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTS------SSEEEEEECCCC---------CCCHHHHHHHHTTCCEEC-CSC--SCSHH
T ss_pred cCCEEEEEecCHHHHHHHHHHHHC------CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEc-cCc--CCCHH
Confidence 4689999999985 589999874 379999999877542 47899999999999864 322 23356
Q ss_pred HHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChH
Q 020794 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (321)
Q Consensus 198 ~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~p 275 (321)
+.+.++ ++|++|+++||+ |||+++++.+++++||+||||||+|||++|
T Consensus 77 ~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~~l~~~~~g~iNiHpSlLP~yRG~~p 126 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVAYGL------------------------------LLPKVVLDTPKLGCINVHGSILPRWRGAAP 126 (318)
T ss_dssp HHHHHHTTCCSEEEESSCCS------------------------------CCCHHHHTSSTTCEEEEESSSTTTTBSSCH
T ss_pred HHHHHHhcCCCEEEEeCccc------------------------------cCCHHHHhhCcCCEEEeCCccCcCCCCcCH
Confidence 777775 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 276 AKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 276 i~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
++|||.+|++++|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 127 i~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L 171 (318)
T 3q0i_A 127 IQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASM 171 (318)
T ss_dssp HHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHH
T ss_pred HHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEEEEeeCCCCCHHHH
Confidence 999999999999999999999999999999999999999999987
No 19
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=100.00 E-value=1.1e-35 Score=284.36 Aligned_cols=154 Identities=23% Similarity=0.326 Sum_probs=135.8
Q ss_pred CeeEEEEEeCCch--hHHHHHHhhhcCCcCeeEEEEEeCCCCCC-------CchHHHHHHHcCCCEEEEcCCcchhHHHH
Q 020794 128 KYKVAVLASKQEH--CLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEEL 198 (321)
Q Consensus 128 ~~rIavl~S~~g~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~~~ 198 (321)
+|||+|||+...+ +|++|++. .++|++|+|.++++. .+++.++|+++|||++. +. +.+++++
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~-~~--~~~~~~~ 72 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS------SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQ-PF--SLRDEVE 72 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS------SSEEEEEECCCC----------CCHHHHHHHHTTCCEEC-CS--CSSSHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEEC-cc--cCCCHHH
Confidence 6899999999874 78888874 379999999877642 47899999999999864 22 2233467
Q ss_pred HHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHH
Q 020794 199 LELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPA 276 (321)
Q Consensus 199 ~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi 276 (321)
.+.++ ++|++|+++|++ |||+++++.++.++||+||||||+|||++|+
T Consensus 73 ~~~l~~~~~Dliv~~~~~~------------------------------ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi 122 (314)
T 3tqq_A 73 QEKLIAMNADVMVVVAYGL------------------------------ILPKKALNAFRLGCVNVHASLLPRWRGAAPI 122 (314)
T ss_dssp HHHHHTTCCSEEEEESCCS------------------------------CCCHHHHTSSTTCEEEEESSCTTTTBSSCHH
T ss_pred HHHHHhcCCCEEEEcCccc------------------------------ccCHHHHhhCcCCEEEecCccccCCCCccHH
Confidence 77775 899999999999 9999999999999999999999999999999
Q ss_pred HHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 277 KQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 277 ~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
+|||.+|++++|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 123 ~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L 166 (314)
T 3tqq_A 123 QRAILAGDRETGISIMQMNEGLDTGDVLAKSACVISSEDTAADL 166 (314)
T ss_dssp HHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHH
T ss_pred HHHHHcCCCeeEEEEEeeecCCCCCCEEEEEEEeeCCCCCHHHH
Confidence 99999999999999999999999999999999999999999987
No 20
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=100.00 E-value=8.8e-36 Score=285.56 Aligned_cols=156 Identities=28% Similarity=0.376 Sum_probs=137.6
Q ss_pred CCCeeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-------CchHHHHHHHcCCCEEEEcCCcchhHH
Q 020794 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREE 196 (321)
Q Consensus 126 ~~~~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-------~~~v~~~a~~~gIP~~~~~~~~~~~~~ 196 (321)
+++|||+||||... .+|++|++. .++|++|+|+++++. .+++.++|+++|||++. +.+ .+++
T Consensus 2 ~~mmrIvf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~-~~~--~~~~ 72 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSVPVLRRLIED------GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQ-PLR--IREK 72 (317)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT------TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEEC-CSC--TTSH
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHC------CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEc-ccc--CCCH
Confidence 46799999999987 479998874 379999999987642 47899999999999874 322 2233
Q ss_pred HHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCh
Q 020794 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (321)
Q Consensus 197 ~~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~ 274 (321)
+.++.++ ++|++|+++|++ |||+++++.++.++||+||||||+|||++
T Consensus 73 ~~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~~l~~~~~g~iNiHpSlLP~yRG~~ 122 (317)
T 3rfo_A 73 DEYEKVLALEPDLIVTAAFGQ------------------------------IVPNEILEAPKYGCINVHASLLPELRGGA 122 (317)
T ss_dssp HHHHHHHHHCCSEEEESSCCS------------------------------CCCHHHHHSSTTCEEEEESSCTTSSBSSC
T ss_pred HHHHHHHhcCCCEEEEcCchh------------------------------hCCHHHHhhCcCCEEEECCccCcCCCCcC
Confidence 4455564 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 275 PAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 275 pi~~Ai~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
|++||+.+|++++|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 123 pi~~Ai~~G~~~tGvTih~~~~~~DtG~Ii~q~~~~I~~~dt~~~L 168 (317)
T 3rfo_A 123 PIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSL 168 (317)
T ss_dssp HHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTCCHHHH
T ss_pred HHHHHHHcCCCceEEEEEEEcccCCCCCEEEEEEEecCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999987
No 21
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=100.00 E-value=1.6e-35 Score=284.82 Aligned_cols=158 Identities=16% Similarity=0.171 Sum_probs=133.7
Q ss_pred CCeeEEEEEeCCch--hHHHHHHhhhcCCcCeeEEEEEeCCCCC-CCchHHHHHHHcCCCEEEEcCCc--chhHHHHHHH
Q 020794 127 PKYKVAVLASKQEH--CLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKE--NEREEELLEL 201 (321)
Q Consensus 127 ~~~rIavl~S~~g~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~-~~~~v~~~a~~~gIP~~~~~~~~--~~~~~~~~~~ 201 (321)
.+|||+||++.+.. +|++|++ + .++|++|+|.++++ ..+++.++|+++|||++..+... ...++++++.
T Consensus 21 ~~mrIvf~G~~~fa~~~L~~L~~----~--~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~ 94 (329)
T 2bw0_A 21 QSMKIAVIGQSLFGQEVYCHLRK----E--GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAK 94 (329)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHH----T--TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHH----C--CCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHHHHH
Confidence 35899999754432 3455544 3 27999999977653 24689999999999999865321 1123567777
Q ss_pred hc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHH
Q 020794 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQA 279 (321)
Q Consensus 202 l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~A 279 (321)
++ ++|++|+++||+ |||+++++.++.++||+||||||+|||++|++||
T Consensus 95 l~~~~~Dliv~a~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~A 144 (329)
T 2bw0_A 95 YQALGAELNVLPFCSQ------------------------------FIPMEIISAPRHGSIIYHPSLLPRHRGASAINWT 144 (329)
T ss_dssp HHTTCCSEEEESSCSS------------------------------CCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHH
T ss_pred HHhcCCCEEEEeehhh------------------------------hCCHHHHhhCcCCEEEEcCCcCcCCCCcCHHHHH
Confidence 75 899999999999 9999999999999999999999999999999999
Q ss_pred HHhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 280 FDAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 280 i~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
|++|++++|+|+|+|++++|+||||.|+.++|.++||+++|
T Consensus 145 i~~G~~~tGvTvh~~~~~lDtG~Ii~Q~~v~I~~~dt~~~L 185 (329)
T 2bw0_A 145 LIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTL 185 (329)
T ss_dssp HHTTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHH
T ss_pred HHcCCCcEEEEEEEECCcCcCCCEEEEEEEecCCCCCHHHH
Confidence 99999999999999999999999999999999999999987
No 22
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=5.6e-35 Score=299.72 Aligned_cols=153 Identities=22% Similarity=0.286 Sum_probs=136.9
Q ss_pred eeEEEEEeCC--chhHHHHHHhhhcCCcCeeEEEEEeCCCCCC----CchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 129 ~rIavl~S~~--g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~----~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
|||+||+|+. ++||++|+++ +++|++|+|++++.. .+++.++|+++|||++..+.. +++++++.+
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~------~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~---~~~~~~~~l 71 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV---NHPLWVERI 71 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC--------CCHHHHHHHHTCCEECCSCT---TSHHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhC------CCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEeccCCC---CcHHHHHHH
Confidence 6999999998 7899999985 479999999987632 267999999999999875432 234566666
Q ss_pred c--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHH
Q 020794 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAF 280 (321)
Q Consensus 203 ~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai 280 (321)
+ ++|++|+++||+ |||+++++.+++++||+||||||+|||++|++|||
T Consensus 72 ~~~~~d~iv~~~~~~------------------------------il~~~~l~~~~~~~iNiH~slLP~~rG~~p~~~ai 121 (660)
T 1z7e_A 72 AQLSPDVIFSFYYRH------------------------------LIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVL 121 (660)
T ss_dssp HHHCCSEEEEESCCS------------------------------CCCHHHHTTCTTCEEEEESSSTTTTCSSCHHHHHH
T ss_pred HhcCCCEEEEcCccc------------------------------ccCHHHHhcCCCCeEEecCCcCCCCCCccHHHHHH
Confidence 5 899999999999 99999999999999999999999999999999999
Q ss_pred HhCCCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 281 DAGVKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 281 ~~G~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
.+|++++|+|+|+|++++|+||||.|+.++|.++||.++|
T Consensus 122 ~~g~~~~G~t~~~~~~~~D~G~ii~q~~~~i~~~dt~~~l 161 (660)
T 1z7e_A 122 VNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITL 161 (660)
T ss_dssp HTTCSEEEEEEEECCSSTTTSCEEEEEEEECCTTCCHHHH
T ss_pred HcCCCcEEEEEEEECCCccCCCeeEEEEEecCCCCCHHHH
Confidence 9999999999999999999999999999999999999987
No 23
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=99.93 E-value=4e-26 Score=213.55 Aligned_cols=83 Identities=19% Similarity=0.289 Sum_probs=80.3
Q ss_pred CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHHHhC
Q 020794 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAG 283 (321)
Q Consensus 204 ~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai~~G 283 (321)
++|++|+++||+ |||+++++. .++||+||||||+|||++|++|||.+|
T Consensus 77 ~pDliv~~~y~~------------------------------ilp~~il~~--~g~iNiHpSLLP~yRG~~pi~~Ai~~G 124 (260)
T 1zgh_A 77 NPEYILFPHWSW------------------------------IIPKEIFEN--FTCVVFHMTDLPFGRGGSPLQNLIERG 124 (260)
T ss_dssp CCSEEEESSCCS------------------------------CCCHHHHTT--SCEEEEESSCTTTTEESCHHHHHHHTT
T ss_pred CCCEEEEecccc------------------------------ccCHHHHcc--CCEEEEeCCcCCCCCCcCHHHHHHHcC
Confidence 899999999999 999999997 469999999999999999999999999
Q ss_pred CCeeEEEEEEecCCCCCCCeEEEEEEecCCCCChhhh
Q 020794 284 VKLIGATSHFVTEELDAGPIIEQMLELLAISFATELM 320 (321)
Q Consensus 284 ~~~~G~TvH~v~~~~D~G~Ii~Q~~~~I~~~~t~~~L 320 (321)
++++|+|+|+|++++|+||||.|+.++|. ||.++|
T Consensus 125 ~~~tGvTih~~~~~lDtG~Ii~Q~~v~I~--dt~~~L 159 (260)
T 1zgh_A 125 IKKTKISAIKVDGGIDTGDIFFKRDLDLY--GTAEEI 159 (260)
T ss_dssp CCEEEEEEEECCSSSSCSCEEEEEEEECC--SCHHHH
T ss_pred CCcEEEEEEEEccCccCCCeEEEEEEecc--CCHHHH
Confidence 99999999999999999999999999999 899887
No 24
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.73 E-value=3.2e-17 Score=159.07 Aligned_cols=124 Identities=10% Similarity=0.066 Sum_probs=91.6
Q ss_pred CCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhcc
Q 020794 38 PTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (321)
Q Consensus 38 ~~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~ 117 (321)
+..++++||++|||||||||+||++|+++||||+|++|+++ .|.|+||++++++....+.++|+++|.++++++|| .
T Consensus 8 ~~~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~--~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~ 84 (415)
T 3p96_A 8 PPKVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVI--RHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGL-D 84 (415)
T ss_dssp -CCEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEE--TTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTTC-E
T ss_pred CCCCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEE--CCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcCe-E
Confidence 34568999999999999999999999999999999999976 89999999999976433568999999999999996 3
Q ss_pred ceeeeCCCC-----CCeeEEEEEeCC--chhHHHHHHhhhcCCcCeeEEEEEeC
Q 020794 118 SVVRVPDID-----PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISN 164 (321)
Q Consensus 118 ~~~r~~~~~-----~~~rIavl~S~~--g~~l~~lL~~~~~~~l~~~i~~Vis~ 164 (321)
|.++..... ....+..+.+.. +..+.++...+.+..++++-..-+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~ 138 (415)
T 3p96_A 85 VSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD 138 (415)
T ss_dssp EEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES
T ss_pred EEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC
Confidence 334332211 122344444443 56777777777666555554444453
No 25
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=99.51 E-value=1e-13 Score=107.44 Aligned_cols=73 Identities=25% Similarity=0.177 Sum_probs=67.4
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
.+.++|++.|+||||++++||+.|+++|+||++++|+.. .|.|+|++.++.++ ....++|.++|.++++++++
T Consensus 3 ~~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~--~~~~~~~i~v~~~~-~~~l~~l~~~L~~~~~~~~~ 75 (91)
T 1zpv_A 3 AMKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL--DEYFTMMAVVSSDE-KQDFTYLRNEFEAFGQTLNV 75 (91)
T ss_dssp CEEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESS-CCCHHHHHHHHHHHHHHHTE
T ss_pred CceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE--cCEEEEEEEEEeCC-CCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999999999999876 48999999999986 45799999999999999986
No 26
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.51 E-value=2.3e-14 Score=127.43 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=69.5
Q ss_pred CCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC----CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHH
Q 020794 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE----KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (321)
Q Consensus 37 ~~~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~----l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~ 112 (321)
.....+++|+|.|+|||||||+||++|+++|+||++++|+++. ..+.|+|+++++.++ ..+ ++|+++|.+++++
T Consensus 88 ~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~-~~~-~~l~~~l~~~a~~ 165 (195)
T 2nyi_A 88 SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPF-PLY-QEVVTALSRVEEE 165 (195)
T ss_dssp CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEG-GGH-HHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCC-Ccc-HHHHHHHHHHHHH
Confidence 5557789999999999999999999999999999999999764 568999999999875 445 9999999999999
Q ss_pred hhh
Q 020794 113 FNA 115 (321)
Q Consensus 113 lg~ 115 (321)
+||
T Consensus 166 l~~ 168 (195)
T 2nyi_A 166 FGV 168 (195)
T ss_dssp HTC
T ss_pred cCe
Confidence 986
No 27
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.50 E-value=2.7e-13 Score=119.38 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=65.2
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhc
Q 020794 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (321)
Q Consensus 41 ~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~ 116 (321)
++++|||.|+|||||||+||++|+++|+||++++|+.. .|.|+|++.++.+. ...++|+++|.++++++++.
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~--~~~f~~~~~v~~~~--~~~~~l~~~L~~~~~~~~~~ 76 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF--GKEFTLLMLISGSP--SNITRVETTLPLLGQQHDLI 76 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEECH--HHHHHHHHHHHHHHHHHTCE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeec--CCceEEEEEEecCC--CCHHHHHHHHHHHHHhcCCE
Confidence 36999999999999999999999999999999999974 89999999999864 36899999999999998863
No 28
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.48 E-value=7.8e-14 Score=123.94 Aligned_cols=73 Identities=11% Similarity=0.058 Sum_probs=64.9
Q ss_pred CcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCC----hHHHHHHHHHHHHHhh
Q 020794 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWP----REQMDEDFFKLSKMFN 114 (321)
Q Consensus 39 ~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~----~~~L~~~L~~la~~lg 114 (321)
..++++|||+|+|||||||+||++|+++||||+|++|+.. .|.|+|++.++.+.. + .++|+++|.+++++++
T Consensus 2 ~~~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~--~~~f~m~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~ 77 (195)
T 2nyi_A 2 ETQSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACL--GGDFAMIVLVSLNAK--DGKLIQSALESALPGFQISTR 77 (195)
T ss_dssp CCEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESSS--SSHHHHHHHHHHSTTCEEEEE
T ss_pred CceEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEE--CCeEEEEEEEEecCc--cchhHHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999999999999999974 899999999997642 3 7889999998888887
Q ss_pred h
Q 020794 115 A 115 (321)
Q Consensus 115 ~ 115 (321)
+
T Consensus 78 ~ 78 (195)
T 2nyi_A 78 R 78 (195)
T ss_dssp E
T ss_pred C
Confidence 4
No 29
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.40 E-value=1.8e-12 Score=114.01 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=69.6
Q ss_pred CCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC------CCCeEEEEEEEEeCCCCCChHHHHHHHHHHH
Q 020794 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE------KKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (321)
Q Consensus 37 ~~~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~------l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la 110 (321)
.+....++|++.|+||||||++||++|+++|+||.+++++.+. ..+.|+|+++++.++ ..+.++|+++|.+++
T Consensus 88 ~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~-~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 88 QTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDS-GCNLMQLQEEFDALC 166 (192)
T ss_dssp CCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECT-TSCHHHHHHHHHHHH
T ss_pred ccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCC-CCCHHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999999764 578999999999875 568999999999999
Q ss_pred HHhhh
Q 020794 111 KMFNA 115 (321)
Q Consensus 111 ~~lg~ 115 (321)
++++|
T Consensus 167 ~~~~~ 171 (192)
T 1u8s_A 167 TALDV 171 (192)
T ss_dssp HHHTC
T ss_pred HHhCc
Confidence 99986
No 30
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.26 E-value=4e-06 Score=63.43 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=51.0
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHH
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~ 111 (321)
...+.+++.++||||++++|++.|+++|+||.++++... .+.+.+.+.++.++ .+.+.+.++++.+
T Consensus 3 ~~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~--~~~~~~~i~v~~~~----~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 3 DFLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAK--DGIFTCNLMIFVKN----TDKLTTLMDKLRK 68 (88)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEEC--SSEEEEEEEEEESS----HHHHHHHHHHHTT
T ss_pred cEEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEc--CCEEEEEEEEEECC----HHHHHHHHHHHhc
Confidence 346789999999999999999999999999999999753 34666777777753 4555555555543
No 31
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=97.51 E-value=0.00079 Score=64.84 Aligned_cols=92 Identities=11% Similarity=-0.029 Sum_probs=68.4
Q ss_pred CCcccEEEEEEcCC-ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhc
Q 020794 38 PTLTHGIHVFHCPD-EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (321)
Q Consensus 38 ~~~~~~Iltv~G~D-r~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~ 116 (321)
+...++++++.|.| ++|++++|+..++++|.||.++..... ...|.+-+.+..++ .+.++++++|.++++++++.
T Consensus 97 ~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~--~~~~~~~~~v~~~~--~~~~~l~~~l~~l~~~~~vD 172 (415)
T 3p96_A 97 REPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD--YPVIGLELRVSVPP--GADEALRTALNRVSSEEHVD 172 (415)
T ss_dssp CCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES--SSSEEEEEEEECCT--TCHHHHHHHHHHHHHHHTCE
T ss_pred CCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC--CCceEEEEEeeCCC--CCHHHHHHHHHHHhhhcCcC
Confidence 34568899999999 999999999999999999999887642 33455445555554 57899999999999998874
Q ss_pred cceeeeCC-CCCCeeEEEE
Q 020794 117 RSVVRVPD-IDPKYKVAVL 134 (321)
Q Consensus 117 ~~~~r~~~-~~~~~rIavl 134 (321)
-. +.... ..+++|.++|
T Consensus 173 ~~-v~~~~~~~~~~k~viF 190 (415)
T 3p96_A 173 VA-VEDYTLERRAKRLIVF 190 (415)
T ss_dssp EE-EEECSTTTTCCCEEEE
T ss_pred cc-cccccccccCCcEEEE
Confidence 32 22222 2455677666
No 32
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.24 E-value=0.00042 Score=60.38 Aligned_cols=51 Identities=16% Similarity=0.164 Sum_probs=42.7
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEE
Q 020794 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFI 91 (321)
Q Consensus 41 ~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~ 91 (321)
|++.|++...|+||+.++|++.++++|+||..++.......|...|.+.++
T Consensus 2 ~~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~ 52 (164)
T 2f1f_A 2 ARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV 52 (164)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE
T ss_pred eEEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe
Confidence 578999999999999999999999999999998886433346666666666
No 33
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=97.01 E-value=0.00098 Score=60.80 Aligned_cols=89 Identities=17% Similarity=0.206 Sum_probs=56.7
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCC---CCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhcc
Q 020794 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEK---KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (321)
Q Consensus 41 ~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l---~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~ 117 (321)
|.+-|.+.+.||+|+.++|++.|+++++||..++|+.... +|...|. +++.+. ..+.+-+.|+.+.. +.+
T Consensus 3 ~~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~--IEV~d~--~Le~LL~kLrkI~g---V~~ 75 (223)
T 1y7p_A 3 MLRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIY--FEIEGG--DFEKILERVKTFDY---IIE 75 (223)
T ss_dssp -CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEE--EEECSS--CHHHHHHHHHTCTT---EEE
T ss_pred ceEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEE--EEECCC--CHHHHHHHHhCCCC---eeE
Confidence 4567889999999999999999999999999999997531 4566666 666653 56666666665542 221
Q ss_pred ceeeeCCCCC--CeeEEEEEeC
Q 020794 118 SVVRVPDIDP--KYKVAVLASK 137 (321)
Q Consensus 118 ~~~r~~~~~~--~~rIavl~S~ 137 (321)
-.+....++ -+||-+++.|
T Consensus 76 -V~Rv~~~~~i~gkrvii~ggg 96 (223)
T 1y7p_A 76 -IEEEESFERVFGKRVIILGGG 96 (223)
T ss_dssp -EEEECCHHHHTCEEEEEEECH
T ss_pred -EEEEcchhhhcCcEEEEECCc
Confidence 122222111 3788888754
No 34
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.00 E-value=0.0017 Score=55.66 Aligned_cols=89 Identities=12% Similarity=-0.009 Sum_probs=61.4
Q ss_pred cccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhccc
Q 020794 40 LTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (321)
Q Consensus 40 ~~~~Iltv~G-~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~ 118 (321)
.....+++.| +|++|+.++|.+.|+++|+||..+.|.... +|.+.+++.++-+ +.+...+.|+++.++++...
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~-~g~~~isf~v~~~----~~~~a~~~l~~~~~~l~~~~- 96 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGS-EGTTDFSFTVPRG----DYKQTLEILSERQDSIGAAS- 96 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECGG----GHHHHHHHHHHSSTTTTCSE-
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCC-CCeeEEEEEEech----HHHHHHHHHHHHHHHcCCce-
Confidence 3556889997 999999999999999999999999987532 4666666666432 34556677777666665311
Q ss_pred eeeeCCCCCCeeEEEEEeC
Q 020794 119 VVRVPDIDPKYKVAVLASK 137 (321)
Q Consensus 119 ~~r~~~~~~~~rIavl~S~ 137 (321)
+...+...+|.+.+.+
T Consensus 97 ---i~~~~~~a~vsvvG~~ 112 (167)
T 2re1_A 97 ---IDGDDTVCKVSAVGLG 112 (167)
T ss_dssp ---EEEESSEEEEEEECSS
T ss_pred ---EEecCCEEEEEEECCC
Confidence 1223345677777766
No 35
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.97 E-value=0.0011 Score=57.79 Aligned_cols=68 Identities=19% Similarity=0.113 Sum_probs=49.5
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHH
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~l 109 (321)
.|+..|++...|+||+.++|++.++++|+||..++.......|.-.|.+.++-+ ....+++.+.|.++
T Consensus 2 ~m~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d--~~~leql~kQL~Kl 69 (165)
T 2pc6_A 2 HMRHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP--DEIVEQITKQLNKL 69 (165)
T ss_dssp CEEEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC--HHHHHHHHHHHHHS
T ss_pred ceEEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc--HHHHHHHHHHhcCC
Confidence 468899999999999999999999999999999888643335666666666632 11244444444433
No 36
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.93 E-value=0.0029 Score=52.42 Aligned_cols=63 Identities=10% Similarity=0.069 Sum_probs=46.2
Q ss_pred CCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHH
Q 020794 38 PTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (321)
Q Consensus 38 ~~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~ 108 (321)
-++|...+++.-+|+||+.++|++.|+++|+||..+.|......| + .++. .. +.+..++.|++
T Consensus 2 ~~m~~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~-~-~~~~--~~----d~~~a~~~L~~ 64 (144)
T 2f06_A 2 NAMVAKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFG-I-LRGI--VS----DPDKAYKALKD 64 (144)
T ss_dssp CSSEEEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCE-E-EEEE--ES----CHHHHHHHHHH
T ss_pred CccEEEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCC-E-EEEE--eC----CHHHHHHHHHH
Confidence 355788999999999999999999999999999999886422113 2 3333 22 45666666664
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.80 E-value=0.0031 Score=56.40 Aligned_cols=68 Identities=21% Similarity=0.184 Sum_probs=51.5
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHH
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~l 109 (321)
.|+..|++.-.|+||+.++|++.++++|+||..+........|.-.|.+.++-++ ...++|.+.|.++
T Consensus 27 ~m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e--~~ieqL~kQL~KL 94 (193)
T 2fgc_A 27 IREHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDD--KTIEQIEKQAYKL 94 (193)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECT--THHHHHHHHHTTS
T ss_pred ceEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCH--HHHHHHHHHhcCc
Confidence 5789999999999999999999999999999998886433346555666666442 2466666666544
No 38
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.77 E-value=0.013 Score=50.06 Aligned_cols=104 Identities=16% Similarity=0.065 Sum_probs=70.7
Q ss_pred cccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhcc
Q 020794 40 LTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (321)
Q Consensus 40 ~~~~Iltv~G-~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~-l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~ 117 (321)
.....+++.| +|++|+.++|.+.|+++|+||.-++|.... ..|...+.+.+.-+ +.+...+.|.++.++++.
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~----d~~~a~~~L~~~~~~~~~-- 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD----FAQEALEALEPVLAEIGG-- 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG----GHHHHHHHHHHHHHHHCC--
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH----HHHHHHHHHHHHHHHhCC--
Confidence 3457888888 899999999999999999999999996421 23555555655432 456667788887777763
Q ss_pred ceeeeCCCCCCeeEEEEEeCCc---hhHHHHHHhhhcC
Q 020794 118 SVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEG 152 (321)
Q Consensus 118 ~~~r~~~~~~~~rIavl~S~~g---~~l~~lL~~~~~~ 152 (321)
.+++ .+..-+|.+.|.+-. ..+..++..+.+.
T Consensus 88 -~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~ 122 (167)
T 2dt9_A 88 -EAIL--RPDIAKVSIVGVGLASTPEVPAKMFQAVAST 122 (167)
T ss_dssp -EEEE--ECSEEEEEEEESSGGGSTHHHHHHHHHHHHT
T ss_pred -cEEE--eCCEEEEEEECCCcccCcCHHHHHHHHHHHC
Confidence 2323 345678999997732 2344444444333
No 39
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.87 E-value=0.039 Score=45.71 Aligned_cols=33 Identities=18% Similarity=0.373 Sum_probs=31.0
Q ss_pred EEEEcCCccchHHHHHHHHHhcCCeEeEeeeec
Q 020794 45 HVFHCPDEVGIVAKLSECIASRGGNILAADVFV 77 (321)
Q Consensus 45 ltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~ 77 (321)
|.|.|.||+|++++|++.|+++++||..++...
T Consensus 3 ~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~ 35 (190)
T 2jhe_A 3 LEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP 35 (190)
T ss_dssp EEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec
Confidence 678999999999999999999999999999963
No 40
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=95.79 E-value=0.029 Score=56.54 Aligned_cols=64 Identities=17% Similarity=0.121 Sum_probs=47.7
Q ss_pred cEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHH
Q 020794 42 HGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (321)
Q Consensus 42 ~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~l 109 (321)
...|.+.-+|+||+|++|++.|.++|+||.+++-.-...+|.=.|++.++-+- + +++.++|.++
T Consensus 454 ~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~---~-~~~l~~l~~~ 517 (529)
T 1ygy_A 454 GINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDV---P-DDVRTAIAAA 517 (529)
T ss_dssp SEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCC---C-HHHHHHHHHH
T ss_pred ccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCC---C-HHHHHHHhcC
Confidence 45677778999999999999999999999998876545566666777776432 3 4455556654
No 41
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=95.74 E-value=0.029 Score=46.26 Aligned_cols=57 Identities=19% Similarity=0.175 Sum_probs=39.3
Q ss_pred EEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHH
Q 020794 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (321)
Q Consensus 44 Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~ 108 (321)
++.+.-+|+||+.|++++.|+++|+||..+-.+. .++.-.+. ++.. +.+...+.|.+
T Consensus 74 vv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~--~~~~~~~~--i~~~----d~~~A~~~L~~ 130 (144)
T 2f06_A 74 VVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA--NNNVANVV--IRPS----NMDKCIEVLKE 130 (144)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEEEEE--EEES----CHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc--cCCcEEEE--EEeC----CHHHHHHHHHH
Confidence 6777779999999999999999999998866652 23443433 3332 34544454543
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.45 E-value=0.035 Score=49.57 Aligned_cols=96 Identities=16% Similarity=0.026 Sum_probs=66.8
Q ss_pred CCCcccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 37 SPTLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 37 ~~~~~~~Iltv~G-~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
+-..+-+.+|+.| ||+||+.|+|=+.|+++|+||.=+.|....... ....+.+.++. .+.+...+.++++..+++.
T Consensus 30 a~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~-~~~~~sftv~~--~d~~~~~~~l~~~~~~~~~ 106 (200)
T 4go7_X 30 AHDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVED-GKTDITFTCSR--DVGPAAVEKLDSLRNEIGF 106 (200)
T ss_dssp EEECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--C-CEEEEEEEEEG--GGHHHHHHHHHTTHHHHCC
T ss_pred EccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccc-cceEEEEecch--hhHHHHHHHHHHHHhhhce
Confidence 3344556788876 999999999999999999999999997542222 23355566654 2567777778888777754
Q ss_pred ccceeeeCCCCCCeeEEEEEeCCc
Q 020794 116 MRSVVRVPDIDPKYKVAVLASKQE 139 (321)
Q Consensus 116 ~~~~~r~~~~~~~~rIavl~S~~g 139 (321)
.. +...+.--||.+.|.|--
T Consensus 107 ~~----v~~~~~iakVSvVG~GM~ 126 (200)
T 4go7_X 107 SQ----LLYDDHIGKVSLIGAGMR 126 (200)
T ss_dssp SE----EEEECCEEEEEEEEESCT
T ss_pred ee----EEEecCeeeeeeeccccc
Confidence 22 222345679999998864
No 43
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.06 E-value=0.073 Score=52.03 Aligned_cols=50 Identities=16% Similarity=0.131 Sum_probs=39.8
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEe
Q 020794 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIF 92 (321)
Q Consensus 41 ~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~ 92 (321)
....|.+.-.|+||++++|++.|+++|+||..++... .++.=.|++.++-
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEEEcCC
Confidence 3455778889999999999999999999999987764 3555556666664
No 44
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=94.80 E-value=0.33 Score=42.08 Aligned_cols=103 Identities=15% Similarity=-0.042 Sum_probs=66.7
Q ss_pred cEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCC-CCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhccce
Q 020794 42 HGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEK-KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (321)
Q Consensus 42 ~~Iltv~G-~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l-~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~~ 119 (321)
...+|+.| +|++|+.++|-+.|+++|+||.-+.|..... .|.-.+.+.++ . .+.+...+.|+++.++++.. .
T Consensus 16 ~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~--~--~~~~~a~~~L~~~~~el~~~--~ 89 (181)
T 3s1t_A 16 EAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCS--R--DVGPAAVEKLDSLRNEIGFS--Q 89 (181)
T ss_dssp EEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEE--T--TTHHHHHHHHHHTHHHHCCS--E
T ss_pred EEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEe--h--hHHHHHHHHHHHHHHhcCcc--e
Confidence 34566644 7999999999999999999999999875321 45444444443 2 24567777788877777532 2
Q ss_pred eeeCCCCCCeeEEEEEeCCc---hhHHHHHHhhhcC
Q 020794 120 VRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEG 152 (321)
Q Consensus 120 ~r~~~~~~~~rIavl~S~~g---~~l~~lL~~~~~~ 152 (321)
+ ...+..-+|++.|.|-. ..+..+.....+.
T Consensus 90 v--~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~ 123 (181)
T 3s1t_A 90 L--LYDDHIGKVSLIGAGMRSHPGVTATFCEALAAV 123 (181)
T ss_dssp E--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred E--EEeCCEEEEEEEecccccCchHHHHHHHHHHHC
Confidence 2 22345679999998752 1233444444433
No 45
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=94.58 E-value=0.27 Score=46.69 Aligned_cols=55 Identities=13% Similarity=0.331 Sum_probs=37.8
Q ss_pred HHHhcCCCEEEEEeecc-----ccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 199 LELVQNTDFLVLARYMQ-----PVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 199 ~~~l~~~Dlivlag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
.+.++++|++.+-.|-+ ..+...+.+. +|-+..++++..+..+|=+|| ||++||-
T Consensus 218 ~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~------------------~y~v~~ell~~a~~~ai~mH~--lP~~Rg~ 277 (315)
T 1pvv_A 218 VKAVKDADVIYTDVWASMGQEAEAEERRKIFR------------------PFQVNKDLVKHAKPDYMFMHC--LPAHRGE 277 (315)
T ss_dssp HHHTTTCSEEEECCCCCSSTTSSSSHHHHHHG------------------GGCBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred HHHhCCCCEEEEcceeccCcccchHHHHHHHH------------------hcCCCHHHHhhcCCCcEEECC--CCCCCCC
Confidence 34455899998888832 0111111222 358999999998889999997 7999884
No 46
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=94.43 E-value=0.29 Score=46.38 Aligned_cols=75 Identities=16% Similarity=0.257 Sum_probs=45.9
Q ss_pred HHHHcCCCEEEEcCCcchhHHHHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhc
Q 020794 176 FLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSY 255 (321)
Q Consensus 176 ~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~ 255 (321)
.|++.|..+.... ++.+.++++|++.+-.|.+ ..+..+...-....-+|-+..++++..
T Consensus 197 ~a~~~G~~~~~~~--------d~~eav~~aDvvy~~~w~s-------------mg~~~~~~~~~~~~~~y~v~~~~l~~a 255 (307)
T 2i6u_A 197 RAQDTGASVTVTA--------DAHAAAAGADVLVTDTWTS-------------MGQENDGLDRVKPFRPFQLNSRLLALA 255 (307)
T ss_dssp HHHHHTCCEEEES--------CHHHHHTTCSEEEECCSSC-------------TTCTTSCCCSSGGGGGGCBCHHHHHHS
T ss_pred HHHHcCCeEEEEE--------CHHHHhcCCCEEEecceec-------------CCcccchHHHHHHHhhcCCCHHHHhhc
Confidence 3446676655432 1334455899998888843 000000000011223569999999999
Q ss_pred CCCeEEecCCCCCCCCCC
Q 020794 256 GKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 256 ~~~~INiHpslLP~yrG~ 273 (321)
+..++=+|| ||++||-
T Consensus 256 ~~~ai~mH~--lP~~Rg~ 271 (307)
T 2i6u_A 256 DSDAIVLHC--LPAHRGD 271 (307)
T ss_dssp CTTCEEEEC--SCCCBTT
T ss_pred CCCcEEECC--CCCCCCc
Confidence 889999997 7999983
No 47
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=93.90 E-value=0.27 Score=46.97 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=24.2
Q ss_pred cccCChhHHhhc-CCCeEEecCCCCCCCCCC
Q 020794 244 NMILSGKFLRSY-GKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 244 ~~il~~~~l~~~-~~~~INiHpslLP~yrG~ 273 (321)
+|-+..++++.. +..+|=+|| ||++||-
T Consensus 263 ~y~v~~ell~~a~k~dai~mH~--LP~~Rg~ 291 (325)
T 1vlv_A 263 PYQVNERVMEMTGKSETIFMHC--LPAVKGQ 291 (325)
T ss_dssp GGCBCHHHHHTTCCTTCEEEEC--SCCCBTT
T ss_pred hcCCCHHHHHhccCCCeEEECC--CCCCCCc
Confidence 459999999998 778999997 7999984
No 48
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=93.32 E-value=0.49 Score=40.64 Aligned_cols=105 Identities=17% Similarity=0.046 Sum_probs=64.3
Q ss_pred ccEEEEEE-cCCccchHHHHHHHHHhcCCeEeEeeeeccC-CCC--eEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhc
Q 020794 41 THGIHVFH-CPDEVGIVAKLSECIASRGGNILAADVFVPE-KKN--VFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (321)
Q Consensus 41 ~~~Iltv~-G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~-l~g--~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~ 116 (321)
....+++. .+|++|+.++|.+.|+++|+||.-+.|.... .+| .|. +.++. .+.+...+.|+++.++++..
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~is----f~v~~--~d~~~a~~~l~~~~~~~~~~ 87 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDIT----FTCPR--SDGRRAMEILKKLQVQGNWT 87 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEE----EEEEH--HHHHHHHHHHHTTTTTTTCS
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEE----EEEcc--ccHHHHHHHHHHHHHhcCCC
Confidence 44567774 5999999999999999999999999886421 122 233 22221 13455566666655555531
Q ss_pred cceeeeCCCCCCeeEEEEEeCCc---hhHHHHHHhhhcCCcC
Q 020794 117 RSVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLP 155 (321)
Q Consensus 117 ~~~~r~~~~~~~~rIavl~S~~g---~~l~~lL~~~~~~~l~ 155 (321)
.+ ...+..-+|.+.|++-. ..+..++..+.+...+
T Consensus 88 --~v--~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~In 125 (178)
T 2dtj_A 88 --NV--LYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVN 125 (178)
T ss_dssp --EE--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred --eE--EEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCC
Confidence 12 22346678999998653 2244455554444433
No 49
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=92.71 E-value=0.065 Score=51.69 Aligned_cols=55 Identities=16% Similarity=0.324 Sum_probs=35.8
Q ss_pred CCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEE
Q 020794 124 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (321)
Q Consensus 124 ~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~ 185 (321)
...+|.||+|+|+|-|.. -+..+++-.-..++++|++.. .....++|+++|||++
T Consensus 3 ~~~~~~rv~VvG~G~g~~---h~~a~~~~~~~~elvav~~~~----~~~a~~~a~~~gv~~~ 57 (372)
T 4gmf_A 3 SASPKQRVLIVGAKFGEM---YLNAFMQPPEGLELVGLLAQG----SARSRELAHAFGIPLY 57 (372)
T ss_dssp ----CEEEEEECSTTTHH---HHHTTSSCCTTEEEEEEECCS----SHHHHHHHHHTTCCEE
T ss_pred CCCCCCEEEEEehHHHHH---HHHHHHhCCCCeEEEEEECCC----HHHHHHHHHHhCCCEE
Confidence 456799999999987643 233333222137899888654 2457889999999965
No 50
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=92.20 E-value=0.43 Score=40.46 Aligned_cols=62 Identities=23% Similarity=0.072 Sum_probs=45.7
Q ss_pred cccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhh
Q 020794 40 LTHGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (321)
Q Consensus 40 ~~~~Iltv~G~D---r~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg 114 (321)
..-.+++++|.+ +||+.+++.+.|+++|+||..++.. +.. +.+.++ .+...++++.+-++|+
T Consensus 101 ~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ists----e~~--is~vv~-------~~d~~~av~~Lh~~f~ 165 (167)
T 2re1_A 101 DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTS----EIK--VSVLID-------EKYMELATRVLHKAFN 165 (167)
T ss_dssp SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEEEC----SSE--EEEEEE-------GGGHHHHHHHHHHHTT
T ss_pred CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEEcc----cCE--EEEEEe-------HHHHHHHHHHHHHHhc
Confidence 346789999998 9999999999999999999998631 222 222232 2456678888877774
No 51
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=92.02 E-value=0.88 Score=43.75 Aligned_cols=59 Identities=17% Similarity=0.261 Sum_probs=36.7
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 199 ~~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
.+.++++|+|.+-.|-. -+.|.+ . +. ...+-+|.+.+++++..+..+|=+|| ||.+||-
T Consensus 242 ~eav~~aDVvyt~~w~s---mg~e~~--~---~~------~~~~~~y~vt~ell~~ak~dai~MHc--LPa~Rg~ 300 (340)
T 4ep1_A 242 ELAVNEADFIYTDVWMS---MGQEGE--E---EK------YTLFQPYQINKELVKHAKQTYHFLHC--LPAHREE 300 (340)
T ss_dssp HHHHTTCSEEEECCC---------CH--H---HH------HHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCBTT
T ss_pred HHHhCCCCEEEecCccC---CCCCch--H---HH------HHHhccccCCHHHHHhcCCCcEEECC--CCCCCCc
Confidence 34455899998877732 000000 0 00 01123469999999998889999999 6899883
No 52
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=91.87 E-value=1.6 Score=41.59 Aligned_cols=120 Identities=18% Similarity=0.290 Sum_probs=63.9
Q ss_pred CCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHH----HHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR----FLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
+..||+++|-+ +.....++..+.. +..++. +++.+.-.+...+.+ .|++.|..+.... ++.+.+
T Consensus 156 ~glkva~vGD~-~rva~Sl~~~~~~--~G~~v~-~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~--------d~~eav 223 (323)
T 3gd5_A 156 AGLKLAYVGDG-NNVAHSLLLGCAK--VGMSIA-VATPEGFTPDPAVSARASEIAGRTGAEVQILR--------DPFEAA 223 (323)
T ss_dssp TTCEEEEESCC-CHHHHHHHHHHHH--HTCEEE-EECCTTCCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHH--cCCEEE-EECCCcccCCHHHHHHHHHHHHHcCCeEEEEC--------CHHHHh
Confidence 35678877655 3333334433221 235544 223221112333333 3445677665543 133445
Q ss_pred cCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 203 QNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 203 ~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
+++|+|.+-.|-. + |. ..+...-...+-+|.+..++++..+..+|=+|| ||.+||-
T Consensus 224 ~~aDvvyt~~wqs------~---g~----~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHc--lPa~Rg~ 279 (323)
T 3gd5_A 224 RGAHILYTDVWTS------M---GQ----EAETQHRLQLFEQYQINAALLNCAAAEAIVLHC--LPAHRGE 279 (323)
T ss_dssp TTCSEEEECCCC----------------------CCHHHHTTCCBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred cCCCEEEEeceec------C---CC----cccchHHHHHhhccCCCHHHHhhcCCCcEEECC--CCCCCCc
Confidence 5899998887743 0 00 000000011223569999999998889999999 6889983
No 53
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=91.82 E-value=0.5 Score=45.13 Aligned_cols=122 Identities=17% Similarity=0.202 Sum_probs=63.4
Q ss_pred CCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCC--CCchHHHHH----HH--cCCCEEEEcCCcchhHHHH
Q 020794 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG--PNSHVIRFL----ER--HGIPYHYLCAKENEREEEL 198 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~--~~~~v~~~a----~~--~gIP~~~~~~~~~~~~~~~ 198 (321)
+..||+++|-+.......++..+. .+..++. +++.+.-. +...+.+.| ++ .|..+.... ++
T Consensus 160 ~gl~va~vGD~~~~va~Sl~~~~~--~~G~~v~-~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~--------d~ 228 (328)
T 3grf_A 160 KGIKFAYCGDSMNNVTYDLMRGCA--LLGMECH-VCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH--------DC 228 (328)
T ss_dssp GGCCEEEESCCSSHHHHHHHHHHH--HHTCEEE-EECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES--------SH
T ss_pred CCcEEEEeCCCCcchHHHHHHHHH--HcCCEEE-EECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc--------CH
Confidence 346888877653333344444332 1235554 22322111 222243333 34 576665543 23
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 199 ~~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
.+.++++|+|.+-.|.- .-.|+|-+.. ....+-+|.+..++++..+..+|=+|| ||.+||-
T Consensus 229 ~eav~~aDvvytd~W~s-m~iq~er~~~-----------~~~~~~~y~vt~~~l~~a~~~ai~mH~--lPa~Rg~ 289 (328)
T 3grf_A 229 KKGCEGVDVVYTDSWMS-YHITKEQKEA-----------RLKVLTPFQVDDAVMAVTSKRSIFMNC--LPATRGE 289 (328)
T ss_dssp HHHHTTCSEEEECCCC---------CCT-----------HHHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCTTT
T ss_pred HHHhcCCCEEEecCccc-cCCcHHHHHH-----------HHHHhcCCCCCHHHHHhcCCCCEEECC--CCCCCCC
Confidence 34456899998765522 0011211110 111233469999999998889999999 6889883
No 54
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=91.43 E-value=0.6 Score=44.22 Aligned_cols=59 Identities=19% Similarity=0.410 Sum_probs=38.2
Q ss_pred HHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 200 ELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 200 ~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
+.++++|+|.+-.|.. .+.|...+= ....+.+|.+..++++..+..+|=+|| ||.+||-
T Consensus 210 eav~~aDvvyt~~w~s---mg~e~~~~~----------~~~~~~~y~v~~e~l~~a~~~ai~mH~--lPa~Rg~ 268 (307)
T 3tpf_A 210 EALKDKDVVITDTWVS---MGEENEKER----------KIKEFEGFMIDEKAMSVANKDAILLHC--LPAYRGY 268 (307)
T ss_dssp HHHTTCSEEEECCSSC---TTGGGGHHH----------HHHHTGGGCBCHHHHHHSCTTCEEEEC--SCCCBTT
T ss_pred HHhcCCCEEEecCccc---CCchhhHHH----------HHHHhcccccCHHHHHhcCCCcEEECC--CCCCCCc
Confidence 4455899999888732 111111000 001123469999999998889999999 6899983
No 55
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.93 E-value=0.5 Score=46.54 Aligned_cols=50 Identities=14% Similarity=-0.005 Sum_probs=37.8
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeC
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFD 93 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~ 93 (321)
.....++++=.+.||++++|++.|+++|+||.+..-.. .|.+. ...+|++
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~---~~~~~-y~~~d~~ 390 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT---DGEVG-YLVMEAD 390 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE---CSSCE-EEEEEEC
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC---CCceE-EEEEEec
Confidence 34578888889999999999999999999999965432 34443 4445554
No 56
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=90.67 E-value=0.4 Score=41.22 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=47.7
Q ss_pred CcccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 39 TLTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 39 ~~~~~Iltv~G~---Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
...-++|+++|. |+||+.+++.+.|+++|+||.-++.. ... +.+.+ +.+.++++++.+-+.|..
T Consensus 92 ~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~istS---e~~---Is~vV-------~~~d~~~Av~~Lh~~F~l 158 (178)
T 2dtj_A 92 DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS---EIR---ISVLI-------REDDLDAAARALHEQFQL 158 (178)
T ss_dssp ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE---TTE---EEEEE-------EGGGHHHHHHHHHHHHTC
T ss_pred eCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEEcC---CCe---EEEEE-------eHHHHHHHHHHHHHHHcc
Confidence 345678899997 89999999999999999999988632 111 12222 246678888888888864
No 57
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=88.31 E-value=4.1 Score=39.50 Aligned_cols=87 Identities=18% Similarity=-0.067 Sum_probs=58.7
Q ss_pred EEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhcccee
Q 020794 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (321)
Q Consensus 43 ~Iltv~G-~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~-l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~~~ 120 (321)
..|++.| +|++|+.++|-+.|+++|+||.-+.|...+ ..|...+.+.++- .+.+...+.|+++.++++.. ..
T Consensus 265 ~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~----~~~~~a~~~l~~~~~~~~~~--~v 338 (421)
T 3ab4_A 265 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPR----SDGRRAMEILKKLQVQGNWT--NV 338 (421)
T ss_dssp EEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEET----TTHHHHHHHHHHHHTTTTCS--EE
T ss_pred EEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEec----hhHHHHHHHHHHHHHHcCCc--eE
Confidence 4677774 899999999999999999999999884311 1344455555543 24566677788777777631 12
Q ss_pred eeCCCCCCeeEEEEEeC
Q 020794 121 RVPDIDPKYKVAVLASK 137 (321)
Q Consensus 121 r~~~~~~~~rIavl~S~ 137 (321)
++ .+..-+|.+.+.+
T Consensus 339 ~~--~~~~a~vsvVG~g 353 (421)
T 3ab4_A 339 LY--DDQVGKVSLVGAG 353 (421)
T ss_dssp EE--ECCEEEEEEECGG
T ss_pred EE--eCCeEEEEEEccC
Confidence 22 3455678888765
No 58
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=87.62 E-value=1.4 Score=37.13 Aligned_cols=63 Identities=16% Similarity=0.071 Sum_probs=45.4
Q ss_pred cccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 40 LTHGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 40 ~~~~Iltv~G~D---r~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
..-++++++|.+ +||+.+++.+.|+++|+||.-++ +. .. .+.+.++ .+...++++.|-+.|..
T Consensus 93 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is-~S----e~-~is~vv~-------~~d~~~Av~~Lh~~f~~ 158 (167)
T 2dt9_A 93 PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA-TS----EV-RISVIIP-------AEYAEAALRAVHQAFEL 158 (167)
T ss_dssp CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE-EC----SS-EEEEEEE-------GGGHHHHHHHHHHHTC-
T ss_pred CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE-cc----CC-EEEEEEe-------HHHHHHHHHHHHHHHcC
Confidence 345679999987 99999999999999999997775 21 12 3333333 35567888888777753
No 59
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=87.34 E-value=1 Score=43.22 Aligned_cols=27 Identities=19% Similarity=0.395 Sum_probs=24.0
Q ss_pred ccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 245 MILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 245 ~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
|.+..++++..+..+|=+|| ||.+||-
T Consensus 272 y~vt~ell~~ak~dai~mHc--LPa~Rg~ 298 (339)
T 4a8t_A 272 YQVNQEMMDRAGANCKFMHC--LPATRGE 298 (339)
T ss_dssp TCBCHHHHHHHCTTCEEEEC--SCCCBTT
T ss_pred cccCHHHHHhcCCCcEEECC--CCCCCCC
Confidence 69999999998889999999 6888883
No 60
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=87.05 E-value=1.1 Score=44.40 Aligned_cols=70 Identities=13% Similarity=0.050 Sum_probs=48.3
Q ss_pred CcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHH
Q 020794 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (321)
Q Consensus 39 ~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~ 111 (321)
...+|-+.+...|+||+.++|++.+.++|++|..+-|.....++.- ..+.+-.. .....+++++++++.+
T Consensus 356 ~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~-~~~v~~th--~~~e~~~~~~~~~~~~ 425 (444)
T 3mtj_A 356 VRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQ-VDIILLTH--VTLEKNVNAAIAKIEA 425 (444)
T ss_dssp CEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------C-EEEEEEEC--SEEHHHHHHHHHHHTT
T ss_pred cceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCC-ceEEEEec--cCCHHHHHHHHHHHhc
Confidence 3466889999999999999999999999999999988632101111 23322222 3467888888888765
No 61
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=86.52 E-value=3.9 Score=39.53 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=23.9
Q ss_pred ccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 243 FNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 243 ~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
-+|.+..++++..+ .++=+|| ||.+||-
T Consensus 294 ~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg~ 321 (359)
T 1zq6_A 294 QHFIVDERKMALTN-NGVFSHC--LPLRRNV 321 (359)
T ss_dssp GGGSBCHHHHHTSS-SCEEECC--SCCCBTT
T ss_pred cCCCCCHHHHHhCC-CCEEECC--CCCCCCc
Confidence 34699999999998 9999998 6888883
No 62
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=85.90 E-value=1.3 Score=41.99 Aligned_cols=122 Identities=9% Similarity=0.120 Sum_probs=65.7
Q ss_pred eCCchhHHHHHHh--h--hcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchh---------------HH
Q 020794 136 SKQEHCLVDFLYG--W--QEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER---------------EE 196 (321)
Q Consensus 136 S~~g~~l~~lL~~--~--~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~---------------~~ 196 (321)
+...|..|+|+|. + ..|.+..--++.+-+..+ ........|...|+.+..+..++-.. ..
T Consensus 130 ~~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~~-va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~ 208 (309)
T 4f2g_A 130 TNEYHPCQVLADIFTYYEHRGPIRGKTVAWVGDANN-MLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFD 208 (309)
T ss_dssp CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCH-HHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECS
T ss_pred CCccCcHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEc
Confidence 4445766766663 1 235553222334444311 11244566677788777665321100 02
Q ss_pred HHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 197 ELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 197 ~~~~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
++.+.++++|+|.+-.|.. .+.| .+.......+.+|.+..++++..+..+|=+|| ||.+||-
T Consensus 209 d~~eav~~aDvvyt~~w~s---mg~e----------~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~--lP~~Rg~ 270 (309)
T 4f2g_A 209 DPNEACKGADLVTTDVWTS---MGFE----------AENEARKRAFADWCVDEEMMSHANSDALFMHC--LPAHRGE 270 (309)
T ss_dssp SHHHHTTTCSEEEECCC-------------------------CCSGGGGCBCHHHHTTSCTTCEEEEC--SSCCBTT
T ss_pred CHHHHhcCCCEEEeccccc---Ccch----------hhHHHHHHHhcCceeCHHHHHhcCCCeEEECC--CCCCCCc
Confidence 3455566899998866532 0100 00001112234579999999998889999999 5888883
No 63
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=85.47 E-value=3.5 Score=39.45 Aligned_cols=25 Identities=16% Similarity=0.327 Sum_probs=21.6
Q ss_pred cccCChhHHhhc-CCCeEEecCCCCCCC
Q 020794 244 NMILSGKFLRSY-GKDVINIHHGLLPSF 270 (321)
Q Consensus 244 ~~il~~~~l~~~-~~~~INiHpslLP~y 270 (321)
+|-+..++++.. +..+|=+|| ||++
T Consensus 252 ~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (335)
T 1dxh_A 252 PYQVNMEIMKATGNPRAKFMHC--LPAF 277 (335)
T ss_dssp GGCBCHHHHHTTCCSSCEEEEC--SCCC
T ss_pred cceeCHHHHHhccCCCeEEECC--CCCC
Confidence 458999999988 778999998 7888
No 64
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=85.45 E-value=3.5 Score=39.40 Aligned_cols=25 Identities=24% Similarity=0.466 Sum_probs=21.7
Q ss_pred cccCChhHHhhc-CCCeEEecCCCCCCC
Q 020794 244 NMILSGKFLRSY-GKDVINIHHGLLPSF 270 (321)
Q Consensus 244 ~~il~~~~l~~~-~~~~INiHpslLP~y 270 (321)
+|-+..++++.. +..+|=+|| ||++
T Consensus 252 ~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (333)
T 1duv_G 252 EYQVNSKMMQLTGNPEVKFLHC--LPAF 277 (333)
T ss_dssp GGCBCHHHHHTTCCTTCEEEEC--SCCC
T ss_pred ccccCHHHHHhccCCCcEEECC--CCCC
Confidence 358999999998 778999998 6888
No 65
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=85.39 E-value=1.3 Score=42.85 Aligned_cols=27 Identities=19% Similarity=0.395 Sum_probs=23.9
Q ss_pred ccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 245 MILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 245 ~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
|.+..++++..+..+|=+|| ||.+||-
T Consensus 250 y~vt~ell~~ak~dai~MHc--LPa~Rg~ 276 (355)
T 4a8p_A 250 YQVNQEMMDRAGANCKFMHC--LPATRGE 276 (355)
T ss_dssp TCBCHHHHHHHCTTCEEEEC--SCCCBTT
T ss_pred cccCHHHHHhcCCCcEEECC--CCCCCCC
Confidence 69999999998889999999 6888883
No 66
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=84.96 E-value=3.9 Score=39.49 Aligned_cols=25 Identities=24% Similarity=0.486 Sum_probs=21.4
Q ss_pred cccCChhHHhhcC---CCeEEecCCCCCCC
Q 020794 244 NMILSGKFLRSYG---KDVINIHHGLLPSF 270 (321)
Q Consensus 244 ~~il~~~~l~~~~---~~~INiHpslLP~y 270 (321)
+|-+..++++..+ ..+|=+|| ||++
T Consensus 271 ~y~v~~ell~~ak~~~~dai~MHc--LP~~ 298 (359)
T 2w37_A 271 PYQVNMEAMKKTGTPDDQLIFMHC--LPAF 298 (359)
T ss_dssp GGCBCHHHHHTTCCCGGGCEEEEC--SCCC
T ss_pred ccccCHHHHHhhCCCCCCEEEECC--CCCC
Confidence 3589999999887 78999998 6888
No 67
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=84.42 E-value=3.5 Score=37.47 Aligned_cols=79 Identities=14% Similarity=0.121 Sum_probs=47.7
Q ss_pred CeeEEEEEeCCc-hhHHHHHHhhhcCCcCeeEEEEEeCCCCC---------CCchHHHHHHHcCCCEEEEcCCcc--hhH
Q 020794 128 KYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRG---------PNSHVIRFLERHGIPYHYLCAKEN--ERE 195 (321)
Q Consensus 128 ~~rIavl~S~~g-~~l~~lL~~~~~~~l~~~i~~Vis~~~~~---------~~~~v~~~a~~~gIP~~~~~~~~~--~~~ 195 (321)
.||++++.||.- |++... ...++| ++|.++++..+.. .-..+.+.|+..|||++.++-+.. ...
T Consensus 4 ~MKvvvl~SGGkDSs~al~-~l~~~G---~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~ 79 (237)
T 3rjz_A 4 LADVAVLYSGGKDSNYALY-WAIKNR---FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEV 79 (237)
T ss_dssp CSEEEEECCSSHHHHHHHH-HHHHTT---CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CH
T ss_pred CCEEEEEecCcHHHHHHHH-HHHHcC---CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHH
Confidence 379999999974 554432 233344 6888775443211 123567889999999998874321 113
Q ss_pred HHHHHHhc--CCCEEEE
Q 020794 196 EELLELVQ--NTDFLVL 210 (321)
Q Consensus 196 ~~~~~~l~--~~Dlivl 210 (321)
+++.+.++ +++-++.
T Consensus 80 e~l~~~l~~~~i~~vv~ 96 (237)
T 3rjz_A 80 EDLKRVLSGLKIQGIVA 96 (237)
T ss_dssp HHHHHHHTTSCCSEEEC
T ss_pred HHHHHHHHhcCCcEEEE
Confidence 45666665 5666654
No 68
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=83.46 E-value=2.5 Score=39.86 Aligned_cols=122 Identities=16% Similarity=0.182 Sum_probs=68.0
Q ss_pred eCCchhHHHHHHh--h--hcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHH------------H
Q 020794 136 SKQEHCLVDFLYG--W--QEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEEL------------L 199 (321)
Q Consensus 136 S~~g~~l~~lL~~--~--~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~------------~ 199 (321)
+...|..|+|+|. + ..|.+..--++.+-+..+ ........+...|+.+..+..++-...+++ .
T Consensus 130 ~~~~HPtQaLaDl~Ti~e~~g~l~gl~ia~vGD~~r-va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~ 208 (301)
T 2ef0_A 130 SDRAHPLQALADLLTLKEVFGGLAGLEVAWVGDGNN-VLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPK 208 (301)
T ss_dssp CSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCH-HHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHH
T ss_pred CCccCchHHHHHHHHHHHHhCCcCCcEEEEECCCch-hHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHH
Confidence 4556777777664 1 235554333334444311 123456667778988887764432111223 2
Q ss_pred HHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 200 ELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 200 ~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
+.++++|++.+-.|-+ .+.+ .+........-+|-+..++++..+..+|=+|| ||++||-
T Consensus 209 eav~~aDvvy~~~~~s---mg~~----------~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHp--lP~~Rg~ 267 (301)
T 2ef0_A 209 EAALGAHALYTDVWTS---MGQE----------AEREKRLRDFQGFQVNGELLKLLRPEGVFLHC--LPAHYGE 267 (301)
T ss_dssp HHHTTCSEEEECCCC---------------------CHHHHHTTTCCBCHHHHTTSCTTCEEEEC--SCCCBTT
T ss_pred HHhcCCCEEEecCccc---CCcc----------cchhHHHHHhhccccCHHHHHhcCCCcEEECC--CCCCCCC
Confidence 3345899998877743 0000 00000001123468999999998889999997 7999983
No 69
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=82.97 E-value=2.5 Score=36.42 Aligned_cols=63 Identities=17% Similarity=0.138 Sum_probs=47.8
Q ss_pred cccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 40 LTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 40 ~~~~Iltv~G~---Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
..-.+++++|. ++||+.+++-+.|+++|+||.-++..- . .+.+.+ +.+...++++.+-+.|++
T Consensus 94 ~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~IstSe--i----~Is~vV-------~~~d~~~Av~aLH~~f~l 159 (181)
T 3s1t_A 94 DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTSE--I----RISVLC-------RDTELDKAVVALHEAFGL 159 (181)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEET--T----EEEEEE-------EGGGHHHHHHHHHHHHTC
T ss_pred CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEEcCC--C----EEEEEE-------eHHHHHHHHHHHHHHHcC
Confidence 35678999997 899999999999999999999988431 1 222223 235677888888888865
No 70
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=82.94 E-value=5.9 Score=37.36 Aligned_cols=111 Identities=17% Similarity=0.169 Sum_probs=64.8
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (321)
..||+++|-+. +.....++..+. .++.++.. ++.+.=.+...+.+.|+++|..+..... +.+.++++|
T Consensus 155 gl~va~vGD~~~~rva~Sl~~~~~--~~G~~v~~-~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~aD 223 (308)
T 1ml4_A 155 GLKIGLLGDLKYGRTVHSLAEALT--FYDVELYL-ISPELLRMPRHIVEELREKGMKVVETTT--------LEDVIGKLD 223 (308)
T ss_dssp SEEEEEESCTTTCHHHHHHHHHGG--GSCEEEEE-ECCGGGCCCHHHHHHHHHTTCCEEEESC--------THHHHTTCS
T ss_pred CeEEEEeCCCCcCchHHHHHHHHH--HCCCEEEE-ECCccccCCHHHHHHHHHcCCeEEEEcC--------HHHHhcCCC
Confidence 47888877654 334455555532 23455542 2222111233477888888887655431 233455899
Q ss_pred EEEEEeeccccchhhHhh---hhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 020794 207 FLVLARYMQPVPLQKEAY---LGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 266 (321)
Q Consensus 207 livlag~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpsl 266 (321)
++.+-.|.. |-+ .+| ....-+|-+.+++++..+..+|=+||.+
T Consensus 224 vvyt~~~q~------er~~~~~~~-----------~~~~~~y~v~~~ll~~a~~~ai~mH~lP 269 (308)
T 1ml4_A 224 VLYVTRIQK------ERFPDEQEY-----------LKVKGSYQVNLKVLEKAKDELRIMHPLP 269 (308)
T ss_dssp EEEECCCCG------GGSSSHHHH-----------HTTTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred EEEECCccc------cccCCHHHH-----------HHHhcCcccCHHHHhhcCCCCEEECCCC
Confidence 998887732 111 111 0011356899999999888999999855
No 71
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=82.91 E-value=1.4 Score=45.19 Aligned_cols=93 Identities=14% Similarity=0.059 Sum_probs=59.9
Q ss_pred cccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCC--CCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhc
Q 020794 40 LTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEK--KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (321)
Q Consensus 40 ~~~~Iltv~G-~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l--~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~ 116 (321)
.....|++.+ ||++|+.++|=+.|+++|+|+.=+.|..... .|.+..-+.|-++.. +.+...+.|+++.++++..
T Consensus 442 ~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~~--d~~~a~~~l~~~~~~~~~~ 519 (600)
T 3l76_A 442 QDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEG--DSSQAEAILQPLIKDWLDA 519 (600)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEHH--HHHHHHHHHHHHTTTSTTC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeHH--HHHHHHHHHHHHHHhcCCc
Confidence 3445677755 9999999999999999999998888875321 253333344444431 4555666677666666532
Q ss_pred cceeeeCCCCCCeeEEEEEeCC
Q 020794 117 RSVVRVPDIDPKYKVAVLASKQ 138 (321)
Q Consensus 117 ~~~~r~~~~~~~~rIavl~S~~ 138 (321)
. + ...+.--||++.|.|=
T Consensus 520 ~--v--~~~~~~akVSiVG~GM 537 (600)
T 3l76_A 520 A--I--VVNKAIAKVSIVGSGM 537 (600)
T ss_dssp E--E--EEECCEEEEEEECGGG
T ss_pred e--E--EEeCCeEEEEEECccc
Confidence 2 2 2234567888887653
No 72
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=78.77 E-value=3.1 Score=38.34 Aligned_cols=73 Identities=5% Similarity=0.012 Sum_probs=41.9
Q ss_pred CCCeeEEEEEeCCc-hh----HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHH
Q 020794 126 DPKYKVAVLASKQE-HC----LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 200 (321)
Q Consensus 126 ~~~~rIavl~S~~g-~~----l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~ 200 (321)
-+|.||+|+|.|.- .. +..+..... ..-.+++++|+.... ....++|+++|+|-.+-+ +.+
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~-~~~~~~lvav~d~~~----~~a~~~a~~~g~~~~y~d---------~~e 88 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFG-DVERPRLVHLAEANA----GLAEARAGEFGFEKATAD---------WRA 88 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHC-SSCCCEEEEEECC------TTHHHHHHHHTCSEEESC---------HHH
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhc-cCCCcEEEEEECCCH----HHHHHHHHHhCCCeecCC---------HHH
Confidence 36789999998863 21 111211111 111478998876542 356889999999855411 233
Q ss_pred Hhc--CCCEEEEEe
Q 020794 201 LVQ--NTDFLVLAR 212 (321)
Q Consensus 201 ~l~--~~Dlivlag 212 (321)
+|+ ++|.|+++.
T Consensus 89 ll~~~~iDaV~Iat 102 (393)
T 4fb5_A 89 LIADPEVDVVSVTT 102 (393)
T ss_dssp HHHCTTCCEEEECS
T ss_pred HhcCCCCcEEEECC
Confidence 343 678887764
No 73
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=77.90 E-value=8.5 Score=37.20 Aligned_cols=26 Identities=31% Similarity=0.585 Sum_probs=23.1
Q ss_pred cccCChhHHhhcCCCeEEecCCCCCCCC
Q 020794 244 NMILSGKFLRSYGKDVINIHHGLLPSFK 271 (321)
Q Consensus 244 ~~il~~~~l~~~~~~~INiHpslLP~yr 271 (321)
+|.+..++++..+..+|=+|| ||++|
T Consensus 279 ~y~vt~ell~~a~~dai~MHc--LP~~R 304 (365)
T 4amu_A 279 NFQVDMNMIKAAKNDVIFLHC--LPAFH 304 (365)
T ss_dssp TCCBCHHHHHHSCTTCEEEEC--SCCCC
T ss_pred ccccCHHHHHhcCCCcEEECC--CCCCC
Confidence 468999999988888999998 68998
No 74
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=77.61 E-value=9.8 Score=35.96 Aligned_cols=70 Identities=14% Similarity=0.156 Sum_probs=46.1
Q ss_pred cccEEEEEEcC-CccchHHHHHHHHHhcCCeEeEeeeecc-CCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHH
Q 020794 40 LTHGIHVFHCP-DEVGIVAKLSECIASRGGNILAADVFVP-EKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (321)
Q Consensus 40 ~~~~Iltv~G~-Dr~GIVA~VS~~La~~G~NI~d~~q~~~-~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~ 112 (321)
..|.-|.+.-+ |+||-.+++=+.++.+|+|...+...-. ..-+.|.-.+.++.. .+-+.++++|+++.+.
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~---~~d~~v~~aL~~L~~~ 270 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDADGH---ATDSRVADALAGLHRI 270 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEESC---TTSHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEeCC---CCcHHHHHHHHHHHHh
Confidence 34544555555 9999999999999999999998877522 112333334444432 2446788888877553
No 75
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=77.61 E-value=4.9 Score=35.58 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=47.3
Q ss_pred ccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 41 ~~~Iltv~G~---Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
.-+.++++|. .+||+-|++-+.|++.|+||.-++.. + . .+-+-+ +.+..+++++++-+.|++
T Consensus 114 ~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIstS---E--i---~IS~vV-----~~~d~~~Av~aLH~~F~L 178 (200)
T 4go7_X 114 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS---E--I---RISVLC-----RDTELDKAVVALHEAFGL 178 (200)
T ss_dssp CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEEEC---S--S---EEEEEE-----EGGGHHHHHHHHHHHHTC
T ss_pred CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEEcc---C--C---EEEEEE-----eHHHHHHHHHHHHHHhCC
Confidence 4567888884 68999999999999999999999742 1 1 222323 346788999999999986
No 76
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=77.38 E-value=4.4 Score=37.32 Aligned_cols=71 Identities=10% Similarity=0.202 Sum_probs=42.5
Q ss_pred CCCCeeEEEEEeCC-chh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 125 IDPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 125 ~~~~~rIavl~S~~-g~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
...++||+|+|.|. +.. ....+.. - -.+++++|+... .....++|+++|+|-.+ . ++.++|
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~---~-~~~~lvav~d~~----~~~a~~~a~~~g~~~~y-~--------d~~ell 82 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQD---A-ENCVVTAIASRD----LTRAREMADRFSVPHAF-G--------SYEEML 82 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHH---C-SSEEEEEEECSS----HHHHHHHHHHHTCSEEE-S--------SHHHHH
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHh---C-CCeEEEEEECCC----HHHHHHHHHHcCCCeee-C--------CHHHHh
Confidence 34678999999886 221 2222222 1 147888887543 23568899999999554 2 123334
Q ss_pred c--CCCEEEEEe
Q 020794 203 Q--NTDFLVLAR 212 (321)
Q Consensus 203 ~--~~Dlivlag 212 (321)
+ ++|.|+++.
T Consensus 83 ~~~~iDaV~I~t 94 (350)
T 4had_A 83 ASDVIDAVYIPL 94 (350)
T ss_dssp HCSSCSEEEECS
T ss_pred cCCCCCEEEEeC
Confidence 3 578887764
No 77
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=76.89 E-value=3.9 Score=34.13 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=30.0
Q ss_pred EEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeee
Q 020794 43 GIHVFHCP---DEVGIVAKLSECIASRGGNILAADVF 76 (321)
Q Consensus 43 ~Iltv~G~---Dr~GIVA~VS~~La~~G~NI~d~~q~ 76 (321)
-.+++.|+ |-.||+|+||+-|+++|+-|--++.+
T Consensus 63 r~i~v~~~l~~~~vGilA~is~pLA~agIsif~iSty 99 (134)
T 1zhv_A 63 SCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVSTF 99 (134)
T ss_dssp EEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEECS
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 36888887 99999999999999999888888776
No 78
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=76.71 E-value=11 Score=36.31 Aligned_cols=118 Identities=14% Similarity=0.212 Sum_probs=65.5
Q ss_pred CCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHc------CCCEEEEcCCcchhHHHHHH
Q 020794 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH------GIPYHYLCAKENEREEELLE 200 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~------gIP~~~~~~~~~~~~~~~~~ 200 (321)
...||+++|-.. +....++..+. .+..++. +++.+.-.....+.+.|++. |..+.... ++.+
T Consensus 187 ~glkva~vGD~~-nva~Sl~~~l~--~lG~~v~-~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~--------d~~e 254 (353)
T 3sds_A 187 EGLKIAWVGDAN-NVLFDLAIAAT--KMGVNVA-VATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT--------VPEV 254 (353)
T ss_dssp TTCEEEEESCCC-HHHHHHHHHHH--HTTCEEE-EECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES--------CHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHH--HcCCEEE-EECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC--------CHHH
Confidence 567999987654 33444544432 1345655 33332211345666666643 55665543 2344
Q ss_pred HhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhh--cCCCeEEecCCCCCCCC
Q 020794 201 LVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRS--YGKDVINIHHGLLPSFK 271 (321)
Q Consensus 201 ~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~--~~~~~INiHpslLP~yr 271 (321)
.++++|+|.+-.|.. .+.|.+. .+ ....+.+|.+..++++. .+..+|=+||. |+++
T Consensus 255 av~~aDVvytd~w~s---mg~E~~~-~~---------r~~~~~~y~vt~ell~~~~ak~~ai~MHcL--P~~~ 312 (353)
T 3sds_A 255 AVKDADVIVTDTWIS---MGQETEK-IK---------RLEAFKDFKVTSELAKRGGAKENWKFMHCL--PRHP 312 (353)
T ss_dssp HTTTCSEEEECCC-----------C-HH---------HHHHTTTCCBCHHHHHHHTCCTTCEEEECS--CCCT
T ss_pred HhcCCCEEEeCCccC---CchhhHH-HH---------HHHHhhCceecHHHHhhcccCCCcEEECCC--CCCC
Confidence 566899998866632 1222111 00 01123467999999998 67789999996 7764
No 79
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=76.28 E-value=8.8 Score=36.22 Aligned_cols=72 Identities=17% Similarity=0.261 Sum_probs=38.3
Q ss_pred hHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhH
Q 020794 172 HVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKF 251 (321)
Q Consensus 172 ~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 251 (321)
.+.+.|++.|..+..... +.+.++++|++.+-.|.. |-+ + .+. -....-+|-+..++
T Consensus 197 ~~~~~~~~~g~~~~~~~d--------~~eav~~aDvvyt~~~q~------er~------~-~~~--~~~~~~~y~v~~~l 253 (310)
T 3csu_A 197 YILDMLDEKGIAWSLHSS--------IEEVMAEVDILYMTRVQK------ERL------D-PSE--YANVKAQFVLRASD 253 (310)
T ss_dssp HHHHHHHHTTCCEEECSC--------GGGTTTTCSEEEECC--------------------------------CCBCGGG
T ss_pred HHHHHHHHcCCeEEEEcC--------HHHHhcCCCEEEECCccc------ccc------C-HHH--HHHHhhccCCCHHH
Confidence 355666666665443221 122344799998877732 100 0 000 00111256899999
Q ss_pred HhhcCCCeEEecCCC
Q 020794 252 LRSYGKDVINIHHGL 266 (321)
Q Consensus 252 l~~~~~~~INiHpsl 266 (321)
++..+..+|=+||.+
T Consensus 254 l~~a~~~ai~mH~lP 268 (310)
T 3csu_A 254 LHNAKANMKVLHPLP 268 (310)
T ss_dssp GTTCCTTCEEECCSC
T ss_pred HhhcCCCCEEECCCC
Confidence 999888999999865
No 80
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=75.42 E-value=10 Score=35.05 Aligned_cols=58 Identities=10% Similarity=-0.015 Sum_probs=40.7
Q ss_pred CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHH
Q 020794 50 PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (321)
Q Consensus 50 ~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~-l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~ 111 (321)
+|+||-.+++=+.++.+|+|...+...-.. ..+.|.-.++++ . .+-+.++++|+++.+
T Consensus 197 ~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e-~---~~d~~v~~aL~~L~~ 255 (267)
T 2qmw_A 197 HDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD-S---AITTDIKKVIAILET 255 (267)
T ss_dssp SCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES-C---CSCHHHHHHHHHHHH
T ss_pred CCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe-c---CCcHHHHHHHHHHHH
Confidence 799999999999999999999998776321 113333344444 2 234778888887754
No 81
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=75.23 E-value=16 Score=34.41 Aligned_cols=112 Identities=17% Similarity=0.224 Sum_probs=61.3
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCc-CeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcC
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l-~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~ 204 (321)
...||+++|-+. +.....++..+. .+ ..++. +++.+.-.+...+.+.|++.|..+..... +.+.+++
T Consensus 150 ~glkva~vGD~~~~rva~Sl~~~~~--~~~G~~v~-~~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~ 218 (306)
T 4ekn_B 150 DGIKIAFVGDLKYGRTVHSLVYALS--LFENVEMY-FVSPKELRLPKDIIEDLKAKNIKFYEKES--------LDDLDDD 218 (306)
T ss_dssp TTCEEEEESCTTTCHHHHHHHHHHH--TSSSCEEE-EECCGGGCCCHHHHHHHHHTTCCEEEESC--------GGGCCTT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHH--hcCCCEEE-EECCcccccCHHHHHHHHHcCCEEEEEcC--------HHHHhcC
Confidence 357888887654 333444555432 23 35554 33322111344677778888888765432 1223448
Q ss_pred CCEEEEEeeccc-cchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 020794 205 TDFLVLARYMQP-VPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 266 (321)
Q Consensus 205 ~Dlivlag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpsl 266 (321)
+|+|.+-.|-+- .|-+ +.|.. + .-+|.+..++++. ..+|=+||.+
T Consensus 219 aDvvy~~~~q~er~~~~-~e~~~--~------------~~~y~v~~~~l~~--~~ai~mH~lP 264 (306)
T 4ekn_B 219 IDVLYVTRIQKERFPDP-NEYEK--V------------KGSYKIKREYVEG--KKFIIMHPLP 264 (306)
T ss_dssp CSEEEECCCCGGGCCSH-HHHHH--H------------HHHHCBCHHHHTT--CCCEEECCSC
T ss_pred CCEEEeCCcccccCCCH-HHHHH--h------------ccCcEECHHHHcC--CCCEEECCCC
Confidence 999987665210 0100 11110 0 0135899999988 4689999975
No 82
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=74.79 E-value=6.4 Score=36.24 Aligned_cols=74 Identities=20% Similarity=0.165 Sum_probs=41.4
Q ss_pred CeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCCE
Q 020794 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (321)
Q Consensus 128 ~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dl 207 (321)
++||+|+|.|.-.. ..+..+ ....++++|+...+........++++++|++...+.. -+++++- .++|.
T Consensus 2 ~~rvgiiG~G~~~~--~~~~~l---~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ll~~-~~vD~ 70 (337)
T 3ip3_A 2 SLKICVIGSSGHFR--YALEGL---DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNN-----WWEMLEK-EKPDI 70 (337)
T ss_dssp CEEEEEECSSSCHH--HHHTTC---CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSS-----HHHHHHH-HCCSE
T ss_pred ceEEEEEccchhHH--HHHHhc---CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCC-----HHHHhcC-CCCCE
Confidence 57999999865322 344443 2248999888654311233556677778884433321 1233331 16787
Q ss_pred EEEEe
Q 020794 208 LVLAR 212 (321)
Q Consensus 208 ivlag 212 (321)
++++.
T Consensus 71 V~I~t 75 (337)
T 3ip3_A 71 LVINT 75 (337)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 77653
No 83
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=74.46 E-value=4.9 Score=37.29 Aligned_cols=72 Identities=17% Similarity=0.206 Sum_probs=40.5
Q ss_pred CCCCeeEEEEEeCC-chh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 125 IDPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 125 ~~~~~rIavl~S~~-g~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
..+++||+|+|.|. |.. +..+.. .....++++|+... .....++++++|++++ .. -+++++-
T Consensus 10 ~~~~~rvgiiG~G~~g~~~~~~l~~----~~~~~~lvav~d~~----~~~~~~~~~~~~~~~~--~~-----~~~ll~~- 73 (354)
T 3q2i_A 10 TDRKIRFALVGCGRIANNHFGALEK----HADRAELIDVCDID----PAALKAAVERTGARGH--AS-----LTDMLAQ- 73 (354)
T ss_dssp CSSCEEEEEECCSTTHHHHHHHHHH----TTTTEEEEEEECSS----HHHHHHHHHHHCCEEE--SC-----HHHHHHH-
T ss_pred CCCcceEEEEcCcHHHHHHHHHHHh----CCCCeEEEEEEcCC----HHHHHHHHHHcCCcee--CC-----HHHHhcC-
Confidence 34679999999986 332 333322 11247888776543 2345677888888443 21 1223221
Q ss_pred cCCCEEEEEe
Q 020794 203 QNTDFLVLAR 212 (321)
Q Consensus 203 ~~~Dlivlag 212 (321)
.++|+++++.
T Consensus 74 ~~~D~V~i~t 83 (354)
T 3q2i_A 74 TDADIVILTT 83 (354)
T ss_dssp CCCSEEEECS
T ss_pred CCCCEEEECC
Confidence 1577777654
No 84
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=74.38 E-value=8.8 Score=35.72 Aligned_cols=67 Identities=18% Similarity=0.209 Sum_probs=44.3
Q ss_pred cEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCChHHHHHHHHHHHH
Q 020794 42 HGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (321)
Q Consensus 42 ~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~-l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~ 111 (321)
+.-|.+.-+|+||-.+++=+.++.+|+|...+...-.. ..+.|.-.++++.. .+-+.++++|+++.+
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~eg~---~~d~~v~~aL~~L~~ 267 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFIGH---REDQNVHNALENLRE 267 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEESC---TTSHHHHHHHHHHHT
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEecC---CCcHHHHHHHHHHHH
Confidence 33333334799999999999999999999998776321 12333334444432 234778888887754
No 85
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=73.50 E-value=8.4 Score=36.07 Aligned_cols=115 Identities=13% Similarity=0.049 Sum_probs=63.4
Q ss_pred chhHHHHHHh---h-hcCCcCeeEEEEEeC--CCCCCCchHHHHHHHcCCCEEEEcCCcchh----------HHHHHHHh
Q 020794 139 EHCLVDFLYG---W-QEGKLPVEITCVISN--HDRGPNSHVIRFLERHGIPYHYLCAKENER----------EEELLELV 202 (321)
Q Consensus 139 g~~l~~lL~~---~-~~~~l~~~i~~Vis~--~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~----------~~~~~~~l 202 (321)
.|..|+|+|. . ..|.+..--++.+-+ +.+ ........+...|+.+..+..++-.. ..++.+.+
T Consensus 125 ~HPtQaLaDl~Ti~e~~g~l~gl~va~vGDl~~~r-va~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav 203 (291)
T 3d6n_B 125 QHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSR-VFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGI 203 (291)
T ss_dssp BCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTTCH-HHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCCCc-hHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHh
Confidence 4777776664 1 236554333344555 311 12355666778898887766432100 12234455
Q ss_pred cCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCccccc-ccccCChhHHhhcCCCeEEecCCCCCCCCC
Q 020794 203 QNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY-FNMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (321)
Q Consensus 203 ~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~il~~~~l~~~~~~~INiHpslLP~yrG 272 (321)
+++|++.+ -|.| .+...+. .....-.| -+|-+.+++++..+ |=+|| ||.+||
T Consensus 204 ~~aDvvy~-~~~q---~er~~~~---------~~~~~~~~~~~y~v~~~~l~~a~---i~mH~--lP~~Rg 256 (291)
T 3d6n_B 204 DWADVVIW-LRLQ---KERQKEN---------YIPSESSYFKQFGLTKERFEKVK---LYMHP--GPVNRN 256 (291)
T ss_dssp HHCSEEEE-CCCC---THHHHTT---------SSSCHHHHHHHHSBCHHHHTTCC---CEECS--SCCCBT
T ss_pred CCCCEEEE-eCcc---cCccccc---------cchhHHHHHhhcCcCHHHHHhcc---cccCC--CCCCCC
Confidence 58999988 6765 1110000 00011011 24589999998875 88999 899987
No 86
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=71.86 E-value=12 Score=34.58 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCc--hhHHHHHHhhhcCCcCee-EEEEEeCCCCCC-----Cc
Q 020794 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVE-ITCVISNHDRGP-----NS 171 (321)
Q Consensus 100 ~~L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g--~~l~~lL~~~~~~~l~~~-i~~Vis~~~~~~-----~~ 171 (321)
..+.+.+.+.-+++++ ..+..||+|..||+. .+|-.++...+. .++.+ +.+|..|+.-.+ ..
T Consensus 5 ~~~~~~~~~~i~~~~l---------~~~~~~vlva~SGG~DS~~Ll~ll~~~~~-~~g~~~v~av~vd~g~r~~s~~~~~ 74 (317)
T 1wy5_A 5 SRVIRKVLALQNDEKI---------FSGERRVLIAFSGGVDSVVLTDVLLKLKN-YFSLKEVALAHFNHMLRESAERDEE 74 (317)
T ss_dssp HHHHHHHHHHHHHHCS---------CSSCCEEEEECCSSHHHHHHHHHHHHSTT-TTTCSEEEEEEEECCSSTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC---------CCCCCEEEEEecchHHHHHHHHHHHHHHH-HcCCCEEEEEEEECCCCcccHHHHH
Confidence 3455555555555432 123468999999974 345555554322 23467 777777764221 13
Q ss_pred hHHHHHHHcCCCEEEEc
Q 020794 172 HVIRFLERHGIPYHYLC 188 (321)
Q Consensus 172 ~v~~~a~~~gIP~~~~~ 188 (321)
.+.++|++.|||++.+.
T Consensus 75 ~v~~~a~~lgi~~~v~~ 91 (317)
T 1wy5_A 75 FCKEFAKERNMKIFVGK 91 (317)
T ss_dssp HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHcCCcEEEEE
Confidence 57889999999998875
No 87
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=71.65 E-value=5.7 Score=37.64 Aligned_cols=75 Identities=12% Similarity=0.169 Sum_probs=42.4
Q ss_pred CCCCeeEEEEEeCCc-hh-HHHHHHhhh-cCCc--CeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHH
Q 020794 125 IDPKYKVAVLASKQE-HC-LVDFLYGWQ-EGKL--PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (321)
Q Consensus 125 ~~~~~rIavl~S~~g-~~-l~~lL~~~~-~~~l--~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~ 199 (321)
..+|+||+|+|.|.- .. +.++..... ...+ .+++++|+... .....++|+++|+|-.+ . ++.
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~----~~~a~~~a~~~~~~~~y-~--------d~~ 89 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQD----QAMAERHAAKLGAEKAY-G--------DWR 89 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSS----HHHHHHHHHHHTCSEEE-S--------SHH
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCC----HHHHHHHHHHcCCCeEE-C--------CHH
Confidence 346899999998863 22 233322110 0111 36888877543 23567889999998544 2 123
Q ss_pred HHhc--CCCEEEEEe
Q 020794 200 ELVQ--NTDFLVLAR 212 (321)
Q Consensus 200 ~~l~--~~Dlivlag 212 (321)
++|+ ++|.|+++.
T Consensus 90 ~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 90 ELVNDPQVDVVDITS 104 (412)
T ss_dssp HHHHCTTCCEEEECS
T ss_pred HHhcCCCCCEEEECC
Confidence 3343 678887764
No 88
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=71.48 E-value=12 Score=34.92 Aligned_cols=72 Identities=11% Similarity=0.114 Sum_probs=40.3
Q ss_pred CCCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc-
Q 020794 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (321)
Q Consensus 126 ~~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~- 203 (321)
.+++||+|+|.|. |.. .+..+....-..++++|+... .....++++++|++...+.. +.+++.
T Consensus 21 m~~~rvgiIG~G~~g~~---~~~~l~~~~~~~~lvav~d~~----~~~~~~~a~~~g~~~~~~~~--------~~~ll~~ 85 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSD---HLRRLANTVSGVEVVAVCDIV----AGRAQAALDKYAIEAKDYND--------YHDLIND 85 (357)
T ss_dssp -CCEEEEEECCSHHHHH---HHHHHHHTCTTEEEEEEECSS----TTHHHHHHHHHTCCCEEESS--------HHHHHHC
T ss_pred CCeeeEEEECCcHHHHH---HHHHHHhhCCCcEEEEEEeCC----HHHHHHHHHHhCCCCeeeCC--------HHHHhcC
Confidence 3568999999876 322 222222111247888877543 23567788899964333321 223333
Q ss_pred -CCCEEEEEe
Q 020794 204 -NTDFLVLAR 212 (321)
Q Consensus 204 -~~Dlivlag 212 (321)
++|+++++.
T Consensus 86 ~~~D~V~i~t 95 (357)
T 3ec7_A 86 KDVEVVIITA 95 (357)
T ss_dssp TTCCEEEECS
T ss_pred CCCCEEEEcC
Confidence 577777654
No 89
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=69.29 E-value=12 Score=34.40 Aligned_cols=70 Identities=11% Similarity=0.110 Sum_probs=39.8
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc--C
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~ 204 (321)
++||+|+|.|. |.. .+..+.+.....++++|+... .....++++++||+...+.. +.++++ +
T Consensus 2 ~~rigiIG~G~~g~~---~~~~l~~~~~~~~l~av~d~~----~~~~~~~~~~~g~~~~~~~~--------~~~ll~~~~ 66 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKE---HINRITNKLSGAEIVAVTDVN----QEAAQKVVEQYQLNATVYPN--------DDSLLADEN 66 (344)
T ss_dssp CEEEEEECCSHHHHH---HHHHHHHTCSSEEEEEEECSS----HHHHHHHHHHTTCCCEEESS--------HHHHHHCTT
T ss_pred eEEEEEECccHHHHH---HHHHHHhhCCCcEEEEEEcCC----HHHHHHHHHHhCCCCeeeCC--------HHHHhcCCC
Confidence 47999999876 222 233332111247888776543 23567788899975443331 223333 4
Q ss_pred CCEEEEEe
Q 020794 205 TDFLVLAR 212 (321)
Q Consensus 205 ~Dlivlag 212 (321)
+|+++++.
T Consensus 67 ~D~V~i~t 74 (344)
T 3mz0_A 67 VDAVLVTS 74 (344)
T ss_dssp CCEEEECS
T ss_pred CCEEEECC
Confidence 78877764
No 90
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=69.03 E-value=80 Score=29.98 Aligned_cols=61 Identities=11% Similarity=0.159 Sum_probs=34.5
Q ss_pred HHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCc-ccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGS-LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 199 ~~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
.+.++++|+|.+-.|-. |-+.+ ..+.... ...|-.|.+.+++++..+ .+|=+|| ||.+||-
T Consensus 260 ~eav~~aDvvyt~r~q~------~r~~~-----~~~~~~~~~~~~~~y~v~~~l~~~~~-~ai~MHp--lP~~Rg~ 321 (359)
T 3kzn_A 260 DSAYAGADVVYAKSWGA------LPFFG-----NWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHC--LPLRRNV 321 (359)
T ss_dssp HHHHTTCSEEEEECCCC------GGGTT-----CCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECC--SCCCBTT
T ss_pred HHHhcCCeEEEEEEEEE------eeccc-----chhhhHHHHHHHhccChHHHHhcCCC-CCEEECC--CCCCCCC
Confidence 34455899999888843 10000 0000000 011234588899887655 6777997 5888883
No 91
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=68.48 E-value=22 Score=33.72 Aligned_cols=67 Identities=12% Similarity=0.045 Sum_probs=45.5
Q ss_pred EEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHH
Q 020794 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (321)
Q Consensus 43 ~Iltv~G-~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~ 111 (321)
-++.+.- .|+||-.+++=+.++.+|+|...+...-. .++.+.-+..+|+.. ..+-+.++++|+++.+
T Consensus 208 s~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~-~~~~~~Y~FfiD~eg-~~~d~~v~~AL~~L~~ 275 (329)
T 3luy_A 208 SVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPI-KGRTGTYSFIVTLDA-APWEERFRDALVEIAE 275 (329)
T ss_dssp EEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEE-TTEEEEEEEEEEESS-CTTSHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeEC-CCCCccEEEEEEEeC-CcCCHHHHHHHHHHHH
Confidence 3444433 38999999999999999999999877632 123333444466654 2344778888887754
No 92
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=66.92 E-value=12 Score=36.45 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=41.9
Q ss_pred CeeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCCCC-----chHHHHHHHcCCCEEEEc
Q 020794 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 128 ~~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~-----~~v~~~a~~~gIP~~~~~ 188 (321)
..||+|..||.- .+|-.+|..++......++.+|..||.-.+. ..+.++|+++|||++++.
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~ 80 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER 80 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEE
Confidence 458999999964 4565666654322135688888888743222 257889999999998875
No 93
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=66.91 E-value=8.4 Score=35.83 Aligned_cols=51 Identities=24% Similarity=0.198 Sum_probs=32.3
Q ss_pred CCCeeEEEEEeCCc-h-h-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEE
Q 020794 126 DPKYKVAVLASKQE-H-C-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (321)
Q Consensus 126 ~~~~rIavl~S~~g-~-~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~ 185 (321)
.+++||+|+|.|.- . . +..+.. .+ ..++++|+... .....++++++|+|..
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~ 78 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEA---EP--LTEVTAIASRR----WDRAKRFTERFGGEPV 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHH---CT--TEEEEEEEESS----HHHHHHHHHHHCSEEE
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHh---CC--CeEEEEEEcCC----HHHHHHHHHHcCCCCc
Confidence 35689999998763 2 2 233322 11 47888887643 2356778889999875
No 94
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=66.52 E-value=15 Score=36.17 Aligned_cols=64 Identities=14% Similarity=0.084 Sum_probs=47.6
Q ss_pred cccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhh
Q 020794 40 LTHGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (321)
Q Consensus 40 ~~~~Iltv~G~D---r~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg 114 (321)
..-.+++++|.. ++|+.+++-+.|+++|+||.-++|...+ -.+.+.++ .+..+++++.+-++|.
T Consensus 372 ~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtSe----i~Is~vV~-------~~d~~~Av~aLH~~ff 438 (446)
T 3tvi_A 372 PNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSE----INVIVGVE-------TVDFEKAVKSIYNAFN 438 (446)
T ss_dssp EEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSCT----TEEEEEEE-------GGGHHHHHHHHHHHHC
T ss_pred CCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCCC----ceEEEEEc-------HHHHHHHHHHHHHHHh
Confidence 456799999974 8999999999999999999999985321 12233332 3556788888877773
No 95
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=66.45 E-value=7.2 Score=35.81 Aligned_cols=70 Identities=19% Similarity=0.257 Sum_probs=40.4
Q ss_pred CeeEEEEEeCCchhHHHHHHhhhc-CCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc--C
Q 020794 128 KYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (321)
Q Consensus 128 ~~rIavl~S~~g~~l~~lL~~~~~-~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~ 204 (321)
++||+|+|.|.-. ...+..++. +...+++++|.+.. .....++|+++|+|..+ . ++.+++. +
T Consensus 2 ~~rigiiG~G~ig--~~~~~~l~~~~~~~~~l~av~d~~----~~~a~~~a~~~~~~~~~-~--------~~~~ll~~~~ 66 (334)
T 3ohs_X 2 ALRWGIVSVGLIS--SDFTAVLQTLPRSEHQVVAVAARD----LSRAKEFAQKHDIPKAY-G--------SYEELAKDPN 66 (334)
T ss_dssp CEEEEEECCSHHH--HHHHHHHTTSCTTTEEEEEEECSS----HHHHHHHHHHHTCSCEE-S--------SHHHHHHCTT
T ss_pred ccEEEEECchHHH--HHHHHHHHhCCCCCeEEEEEEcCC----HHHHHHHHHHcCCCccc-C--------CHHHHhcCCC
Confidence 4799999987632 123333322 11236888876543 23567888999998443 1 1223333 5
Q ss_pred CCEEEEEe
Q 020794 205 TDFLVLAR 212 (321)
Q Consensus 205 ~Dlivlag 212 (321)
+|.++++.
T Consensus 67 vD~V~i~t 74 (334)
T 3ohs_X 67 VEVAYVGT 74 (334)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 78777764
No 96
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=65.79 E-value=22 Score=33.56 Aligned_cols=117 Identities=13% Similarity=0.210 Sum_probs=60.7
Q ss_pred CeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHH----HHHHcCCCEEEEcCCcchhHHHHHHHhc
Q 020794 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR----FLERHGIPYHYLCAKENEREEELLELVQ 203 (321)
Q Consensus 128 ~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~----~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (321)
..||+++|-++ .....++..+. .++.++.. ++.+.-.+...+.+ .|++.|..+.... ++.+.++
T Consensus 155 gl~va~vGD~~-~va~Sl~~~~~--~~G~~v~~-~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~--------d~~eav~ 222 (321)
T 1oth_A 155 GLTLSWIGDGN-NILHSIMMSAA--KFGMHLQA-ATPKGYEPDASVTKLAEQYAKENGTKLLLTN--------DPLEAAH 222 (321)
T ss_dssp TCEEEEESCSS-HHHHHHHTTTG--GGTCEEEE-ECCTTCCCCHHHHHHHHHHHHHHTCCEEEES--------CHHHHHT
T ss_pred CcEEEEECCch-hhHHHHHHHHH--HcCCeEEE-ECCccccCCHHHHHHHHHHHHHcCCeEEEEE--------CHHHHhc
Confidence 46777766543 23344444321 23455542 22221112223333 3445676665433 1334456
Q ss_pred CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCC
Q 020794 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFK 271 (321)
Q Consensus 204 ~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yr 271 (321)
++|++.+-.|.+ .+.|.+ .+. . .-.+-+|-+..++++..+..+|=+||. |++|
T Consensus 223 ~aDvvy~d~w~s---~g~e~~-~~~---~------~~~~~~y~v~~~~l~~a~~dai~mH~l--P~~r 275 (321)
T 1oth_A 223 GGNVLITDTWIS---MGREEE-KKK---R------LQAFQGYQVTMKTAKVAASDWTFLHCL--PRKP 275 (321)
T ss_dssp TCSEEEECCSSC---TTCGGG-HHH---H------HHHTTTCCBCHHHHHTSCTTCEEEECS--CCCT
T ss_pred cCCEEEEecccc---ccchhh-hHH---H------HHhccCceECHHHHhhcCCCCEEECCC--CCCC
Confidence 899998766654 111111 000 0 001234689999999988899999995 5665
No 97
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=65.37 E-value=14 Score=36.41 Aligned_cols=81 Identities=14% Similarity=0.041 Sum_probs=49.9
Q ss_pred EEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChH-HHHHHHHHHHHHhhhccc
Q 020794 43 GIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPRE-QMDEDFFKLSKMFNAMRS 118 (321)
Q Consensus 43 ~Iltv~G---~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~-~L~~~L~~la~~lg~~~~ 118 (321)
..|++.| ++++|+.++|-+.|+++|+||.-+.+.. . .+.+.++-. +.+ .+++.++++.++++...
T Consensus 299 ~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~~----~--~is~~V~~~----d~~~~~~~~~~el~~~~~~~~- 367 (446)
T 3tvi_A 299 TVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGV----D--SVSLVIEDC----KLDGKCDKIIEEIKKQCNPDS- 367 (446)
T ss_dssp EEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEET----T--EEEEEEEHH----HHTTTHHHHHHHHHHHSCCSE-
T ss_pred EEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecCC----C--EEEEEEecc----hHHHHHHHHHHHHHHhcCCCc-
Confidence 4588887 5899999999999999999999887642 1 222333321 112 34455556665554211
Q ss_pred eeeeCCCCCCeeEEEEEeC
Q 020794 119 VVRVPDIDPKYKVAVLASK 137 (321)
Q Consensus 119 ~~r~~~~~~~~rIavl~S~ 137 (321)
+.+ ....-+|++.|.|
T Consensus 368 -v~v--~~~vA~VSvVG~g 383 (446)
T 3tvi_A 368 -IEI--HPNMALVATVGTG 383 (446)
T ss_dssp -EEE--EEEEEEEEEECGG
T ss_pred -EEE--eCCeEEEEEECCC
Confidence 211 2334577777765
No 98
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=64.83 E-value=8.5 Score=36.28 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=39.9
Q ss_pred CCeeEEEEEeC-Cc-hh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc
Q 020794 127 PKYKVAVLASK-QE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (321)
Q Consensus 127 ~~~rIavl~S~-~g-~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (321)
+++||+|++.| .. .. +..+.. .+ ..++++|+... .....++++++|+|++ .. -+++++- .
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~--~~-----~~ell~~-~ 63 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRH---HP--DAQIVAACDPN----EDVRERFGKEYGIPVF--AT-----LAEMMQH-V 63 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHH---CT--TEEEEEEECSC----HHHHHHHHHHHTCCEE--SS-----HHHHHHH-S
T ss_pred CceEEEEEeCCHHHHHHHHHHHHh---CC--CeEEEEEEeCC----HHHHHHHHHHcCCCeE--CC-----HHHHHcC-C
Confidence 36899999988 32 22 333322 12 37888887543 2345678888999854 21 1233321 1
Q ss_pred CCCEEEEEe
Q 020794 204 NTDFLVLAR 212 (321)
Q Consensus 204 ~~Dlivlag 212 (321)
++|+++++.
T Consensus 64 ~vD~V~i~t 72 (387)
T 3moi_A 64 QMDAVYIAS 72 (387)
T ss_dssp CCSEEEECS
T ss_pred CCCEEEEcC
Confidence 578777654
No 99
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=64.64 E-value=16 Score=35.99 Aligned_cols=64 Identities=16% Similarity=0.064 Sum_probs=46.5
Q ss_pred cccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhh
Q 020794 40 LTHGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (321)
Q Consensus 40 ~~~~Iltv~G~D---r~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg 114 (321)
..-.+++++|.. +||+.+++-+.|+++|+||.-++|... + . .+.+.++ .+...++++.+-+.|.
T Consensus 402 ~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~misqgtS--e-~-~Is~vV~-------~~d~~~Av~aLh~~f~ 468 (473)
T 3c1m_A 402 KDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSS--E-V-NISFVID-------EKDLLNCVRKLHEKFI 468 (473)
T ss_dssp EEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEEESSC--S-S-EEEEEEE-------GGGHHHHHHHHHHHHT
T ss_pred CCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEecCCC--C-c-eEEEEEc-------HHHHHHHHHHHHHHHh
Confidence 345679999964 899999999999999999988887532 1 1 2233332 3556788888877774
No 100
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=64.33 E-value=8.9 Score=35.18 Aligned_cols=73 Identities=5% Similarity=0.036 Sum_probs=42.2
Q ss_pred CCeeEEEEEeCCc-hh-HHHHHHh--hhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 127 PKYKVAVLASKQE-HC-LVDFLYG--WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 127 ~~~rIavl~S~~g-~~-l~~lL~~--~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
+|.||+|+|.|.- .. +.++... ...-...+++++|+... .....++|+++|+|..+-+ +.++|
T Consensus 5 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~----~~~a~~~a~~~g~~~~~~d---------~~~ll 71 (390)
T 4h3v_A 5 TNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRD----AEAVRAAAGKLGWSTTETD---------WRTLL 71 (390)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSS----HHHHHHHHHHHTCSEEESC---------HHHHT
T ss_pred CcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCC----HHHHHHHHHHcCCCcccCC---------HHHHh
Confidence 4679999998763 22 2222221 11111235888876543 2356788999999865421 33444
Q ss_pred c--CCCEEEEEe
Q 020794 203 Q--NTDFLVLAR 212 (321)
Q Consensus 203 ~--~~Dlivlag 212 (321)
. ++|.|+++.
T Consensus 72 ~~~~iDaV~I~t 83 (390)
T 4h3v_A 72 ERDDVQLVDVCT 83 (390)
T ss_dssp TCTTCSEEEECS
T ss_pred cCCCCCEEEEeC
Confidence 4 578777764
No 101
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=64.12 E-value=12 Score=30.91 Aligned_cols=37 Identities=8% Similarity=-0.181 Sum_probs=31.5
Q ss_pred cccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeee
Q 020794 40 LTHGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVF 76 (321)
Q Consensus 40 ~~~~Iltv~G---~Dr~GIVA~VS~~La~~G~NI~d~~q~ 76 (321)
..-..+++.| +|++|+.+++-+.|+++|+||.-+.|.
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s 55 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATS 55 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECC
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEec
Confidence 3456788885 578999999999999999999998875
No 102
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=64.06 E-value=12 Score=38.27 Aligned_cols=87 Identities=14% Similarity=0.016 Sum_probs=57.1
Q ss_pred EEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHh-------h
Q 020794 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF-------N 114 (321)
Q Consensus 43 ~Iltv~G-~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~l-------g 114 (321)
..+++.+ +|++|+.++|-+.|+++|+||.-+.|... ..|.-.+- |-++.. +.+...+.++++..++ +
T Consensus 271 ~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~-~~~~~~Is--ftv~~~--~~~~a~~~l~~~~~el~~~~~~~~ 345 (600)
T 3l76_A 271 AKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIH-DGNSNDIA--FTVVKD--LLNTAEAVTSAIAPALRSYPEADQ 345 (600)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCC-BTTEEEEE--EEECGG--GHHHHHHHHHHHGGGGSSSTTCSS
T ss_pred EEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeecc-CCCCceEE--EEEeHH--HHHHHHHHHHHHHHHhhccccccC
Confidence 3566665 79999999999999999999988888752 24543333 334432 4566667777777666 2
Q ss_pred hccceeeeCCCCCCeeEEEEEeCC
Q 020794 115 AMRSVVRVPDIDPKYKVAVLASKQ 138 (321)
Q Consensus 115 ~~~~~~r~~~~~~~~rIavl~S~~ 138 (321)
.. .+...+.--+|++.+.|-
T Consensus 346 ~~----~v~~~~~~a~VsvVG~gm 365 (600)
T 3l76_A 346 EA----EIIVEKGIAKIAIAGAGM 365 (600)
T ss_dssp SS----EEEEECSEEEEEEECGGG
T ss_pred cc----eeEecCCeEEEEEECCCc
Confidence 21 122234567888877653
No 103
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=63.96 E-value=15 Score=29.26 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=41.7
Q ss_pred CCCCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh-
Q 020794 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV- 202 (321)
Q Consensus 125 ~~~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l- 202 (321)
.+.+.+|+|+|.|. |..+...|.. .| ++++++=.+. ...+.+++.|+++...+. .+++.++..
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~--~g---~~v~vid~~~------~~~~~~~~~g~~~i~gd~----~~~~~l~~a~ 68 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLA--SD---IPLVVIETSR------TRVDELRERGVRAVLGNA----ANEEIMQLAH 68 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEESCH------HHHHHHHHTTCEEEESCT----TSHHHHHHTT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHHcCCCEEECCC----CCHHHHHhcC
Confidence 34567899999876 4555555543 23 4666443332 345566678998865442 223344433
Q ss_pred -cCCCEEEEE
Q 020794 203 -QNTDFLVLA 211 (321)
Q Consensus 203 -~~~Dlivla 211 (321)
.++|+++++
T Consensus 69 i~~ad~vi~~ 78 (140)
T 3fwz_A 69 LECAKWLILT 78 (140)
T ss_dssp GGGCSEEEEC
T ss_pred cccCCEEEEE
Confidence 378988765
No 104
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=63.82 E-value=13 Score=36.54 Aligned_cols=63 Identities=11% Similarity=0.044 Sum_probs=43.9
Q ss_pred cccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHh
Q 020794 40 LTHGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (321)
Q Consensus 40 ~~~~Iltv~G---~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~l 113 (321)
.....|++.| ++++|+.++|-+.|+++|+||.-++|... .+.+.+.++- +.+.++++.+-+++
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ts----e~~Is~~V~~-------~d~~~a~~~L~~~l 381 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS----ETNISLVVSE-------EDVDKALKALKREF 381 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCT----TCCEEEEEEG-------GGHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCC----CCEEEEEEec-------hHHHHHHHHHHHHH
Confidence 3456899998 67889999999999999999999998432 2344444432 22445555555555
No 105
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=63.63 E-value=17 Score=33.99 Aligned_cols=52 Identities=6% Similarity=0.031 Sum_probs=31.9
Q ss_pred CCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEE
Q 020794 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~ 185 (321)
+++||+|+|.|..+. ..++..++.. .+++++|+... .....++|+++|++-.
T Consensus 25 ~~irvgiiG~G~~~~-~~~~~~~~~~--~~~lvav~d~~----~~~a~~~a~~~~~~~~ 76 (361)
T 3u3x_A 25 DELRFAAVGLNHNHI-YGQVNCLLRA--GARLAGFHEKD----DALAAEFSAVYADARR 76 (361)
T ss_dssp -CCEEEEECCCSTTH-HHHHHHHHHT--TCEEEEEECSC----HHHHHHHHHHSSSCCE
T ss_pred cCcEEEEECcCHHHH-HHHHHHhhcC--CcEEEEEEcCC----HHHHHHHHHHcCCCcc
Confidence 368999999987542 1122222222 47899887643 2356778888886533
No 106
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=63.11 E-value=12 Score=34.50 Aligned_cols=71 Identities=23% Similarity=0.185 Sum_probs=40.6
Q ss_pred CCCCeeEEEEEeCC--chh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHH
Q 020794 125 IDPKYKVAVLASKQ--EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (321)
Q Consensus 125 ~~~~~rIavl~S~~--g~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~ 201 (321)
..+++||+|+|.|. +.. +.++ .. -....++++|+... .....++++++|+|-.+ . ++.++
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l-~~---~~~~~~lvav~d~~----~~~~~~~a~~~~~~~~~-~--------~~~~l 77 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPAL-KN---LSHLFEITAVTSRT----RSHAEEFAKMVGNPAVF-D--------SYEEL 77 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHH-HT---TTTTEEEEEEECSS----HHHHHHHHHHHSSCEEE-S--------CHHHH
T ss_pred CCCceeEEEEecCHHHHHHHHHHH-Hh---CCCceEEEEEEcCC----HHHHHHHHHHhCCCccc-C--------CHHHH
Confidence 45679999999883 322 3333 21 11247888876543 23566788888985443 1 12233
Q ss_pred hc--CCCEEEEEe
Q 020794 202 VQ--NTDFLVLAR 212 (321)
Q Consensus 202 l~--~~Dlivlag 212 (321)
++ ++|.++++.
T Consensus 78 l~~~~vD~V~i~t 90 (340)
T 1zh8_A 78 LESGLVDAVDLTL 90 (340)
T ss_dssp HHSSCCSEEEECC
T ss_pred hcCCCCCEEEEeC
Confidence 33 577777664
No 107
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=62.58 E-value=12 Score=35.09 Aligned_cols=197 Identities=15% Similarity=0.127 Sum_probs=97.7
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhcccee
Q 020794 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (321)
Q Consensus 41 ~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~~~ 120 (321)
.+.+.+++-+...=-=........+.|++.+.++...... . ..+.+.+...-++. +|....-+
T Consensus 36 gk~la~lF~e~STRTR~SFE~A~~~LGg~~i~l~~~~ss~------------~----kgEsl~DTarvLs~-~~~D~ivi 98 (304)
T 3r7f_A 36 GKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSV------------Q----KGETLYDTIRTLES-IGVDVCVI 98 (304)
T ss_dssp TCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTSTTS------------C----SSSCHHHHHHHHHH-HTCCEEEE
T ss_pred CCEEEEEecCCChhHHHhHHHHHHHCCCeEEEECcccccC------------C----CCCCHHHHHHHHHH-hcCCEEEE
Confidence 4556666655554433344455788899998875421111 0 11223332222222 21111123
Q ss_pred eeCCCCCC------eeEEEEEeC---CchhHHHHHHh---h-hcCCcC-eeEEEEEeCCC-CCCCchHHHHHHHcCCCEE
Q 020794 121 RVPDIDPK------YKVAVLASK---QEHCLVDFLYG---W-QEGKLP-VEITCVISNHD-RGPNSHVIRFLERHGIPYH 185 (321)
Q Consensus 121 r~~~~~~~------~rIavl~S~---~g~~l~~lL~~---~-~~~~l~-~~i~~Vis~~~-~~~~~~v~~~a~~~gIP~~ 185 (321)
|....+.. -+|-|+=-+ ..|..|+|+|. . ..|.+. ..|+ .+-+-. ..........|...|+.+.
T Consensus 99 R~~~~~~~~~la~~~~vPVINagdg~~~HPtQaLaDl~Ti~e~~g~l~glkva-~vGD~~~~rva~Sl~~~~~~~G~~v~ 177 (304)
T 3r7f_A 99 RHSEDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTVS-IHGDIKHSRVARSNAEVLTRLGARVL 177 (304)
T ss_dssp ECSSTTCHHHHHHHCSSCEEESCCTTSCCHHHHHHHHHHHHHHHSCCTTCEEE-EESCCTTCHHHHHHHHHHHHTTCEEE
T ss_pred ecCChhHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHHHhCCCCCCEEE-EEcCCCCcchHHHHHHHHHHcCCEEE
Confidence 33321110 123333332 24677777664 1 125554 3444 333321 0011245667788898887
Q ss_pred EEcCCcchh-------HHHHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccc-cccCChhHHhhcCC
Q 020794 186 YLCAKENER-------EEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF-NMILSGKFLRSYGK 257 (321)
Q Consensus 186 ~~~~~~~~~-------~~~~~~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~il~~~~l~~~~~ 257 (321)
.+..++-.. ..++.+.++++|+|.+-++.+ |.+ +.....-.|| +|-+..++++..+.
T Consensus 178 ~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~q~------er~---------~~~~~~~~~~~~y~v~~~~l~~a~~ 242 (304)
T 3r7f_A 178 FSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQN------ERH---------QSAVSQEGYLNKYGLTVERAERMKR 242 (304)
T ss_dssp EESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCCCT------TTC---------CSSCCSTTHHHHHSBCHHHHTTSCT
T ss_pred EECCCccCcchhhcCccCCHHHHhCCCCEEEeccchh------hcc---------ccchhHHHHhCCCccCHHHHhhcCC
Confidence 765331100 113444555899997765422 110 0001111222 46899999999888
Q ss_pred CeEEecCCCCCCCCC
Q 020794 258 DVINIHHGLLPSFKG 272 (321)
Q Consensus 258 ~~INiHpslLP~yrG 272 (321)
.+|=+|| ||.+||
T Consensus 243 ~ai~mHc--lP~~Rg 255 (304)
T 3r7f_A 243 HAIIMHP--APVNRG 255 (304)
T ss_dssp TCEEECC--SCCCBT
T ss_pred CCEEECC--CCCCCC
Confidence 9999999 478887
No 108
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=62.56 E-value=12 Score=34.33 Aligned_cols=50 Identities=18% Similarity=0.284 Sum_probs=31.3
Q ss_pred CCeeEEEEEeCCc-hhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCE
Q 020794 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (321)
Q Consensus 127 ~~~rIavl~S~~g-~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (321)
+++||+|+|.|.- ..+. ..+++. -..++++|+... .....++++++|+|.
T Consensus 4 ~~~~igiiG~G~~g~~~~---~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~ 54 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFV---AGLRES-AQAEVRGIASRR----LENAQKMAKELAIPV 54 (330)
T ss_dssp CCEEEEECSCCTTHHHHH---HHHHHS-SSEEEEEEBCSS----SHHHHHHHHHTTCCC
T ss_pred CeEEEEEECchHHHHHHH---HHHHhC-CCcEEEEEEeCC----HHHHHHHHHHcCCCc
Confidence 4689999998863 3322 222221 147888776543 245678888999873
No 109
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=62.18 E-value=17 Score=35.10 Aligned_cols=63 Identities=14% Similarity=0.080 Sum_probs=45.6
Q ss_pred cccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 40 LTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 40 ~~~~Iltv~G~---Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
..-.+++++|. ++||+.+++-+.|+++|+||.-++.. +- .+.+.++ .+...++++.+-+.|..
T Consensus 342 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~S----e~--~is~vV~-------~~d~~~Av~~Lh~~f~~ 407 (421)
T 3ab4_A 342 DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS----EI--RISVLIR-------EDDLDAAARALHEQFQL 407 (421)
T ss_dssp CCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEEEE----TT--EEEEEEE-------GGGHHHHHHHHHHHTTC
T ss_pred CCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEEcC----CC--eEEEEEe-------HHHHHHHHHHHHHHHhc
Confidence 34467999996 79999999999999999999876532 11 2223232 35577888888888853
No 110
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=62.13 E-value=6.8 Score=35.44 Aligned_cols=51 Identities=8% Similarity=-0.001 Sum_probs=30.8
Q ss_pred CCeeEEEEEeCCc-hhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCE
Q 020794 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (321)
Q Consensus 127 ~~~rIavl~S~~g-~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (321)
+++||+|+|.|.- .. .++..++.. ...++++|+... .....++++++|++.
T Consensus 5 ~~~~igiIG~G~~g~~--~~~~~l~~~-~~~~l~av~d~~----~~~~~~~a~~~~~~~ 56 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQK--AYLPILTKS-ERFEFVGAFTPN----KVKREKICSDYRIMP 56 (308)
T ss_dssp CCCEEEEECCSHHHHH--HTHHHHTSC-SSSEEEEEECSC----HHHHHHHHHHHTCCB
T ss_pred ccCcEEEEecCHHHHH--HHHHHHHhC-CCeEEEEEECCC----HHHHHHHHHHcCCCC
Confidence 3689999998762 22 122222221 137888776543 235677888889886
No 111
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=61.94 E-value=19 Score=35.26 Aligned_cols=53 Identities=8% Similarity=0.079 Sum_probs=29.9
Q ss_pred CCeeEEEEEeCC--chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 127 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 127 ~~~rIavl~S~~--g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
+++||+|++.+. |..-...+..++.-.-.+++++|+... .....++++++|+|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~----~~~a~~~a~~~g~~ 92 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPT----LKSSLQTIEQLQLK 92 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSC----HHHHHHHHHHTTCT
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCC----HHHHHHHHHHcCCC
Confidence 468999999842 221111222222210147888876543 23466788889987
No 112
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=61.49 E-value=16 Score=35.06 Aligned_cols=27 Identities=22% Similarity=0.374 Sum_probs=20.6
Q ss_pred cccCChhHHhhc-CCCeEEecCCCCCCCCC
Q 020794 244 NMILSGKFLRSY-GKDVINIHHGLLPSFKG 272 (321)
Q Consensus 244 ~~il~~~~l~~~-~~~~INiHpslLP~yrG 272 (321)
+|-+..++++.. +..+|=+|| ||+++.
T Consensus 278 ~y~v~~~~l~~~ak~~~i~mH~--LP~~~n 305 (358)
T 4h31_A 278 PYQVNMNVLKQTGNPNVKFMHC--LPAFHN 305 (358)
T ss_dssp GGCBCHHHHHHTTCTTCEEEEC--SCCCCS
T ss_pred CcccCHHHHHhcCCCCcEEECC--CCCCCC
Confidence 458899999865 457888999 788753
No 113
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=61.14 E-value=18 Score=33.71 Aligned_cols=73 Identities=23% Similarity=0.280 Sum_probs=41.7
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh--c
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--Q 203 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l--~ 203 (321)
+++||+|+|+|. |..+...+.. . ....++++|+...+ .....++|+++|++... ..-+++++.. .
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~--~-~~~~elvav~d~~~---~~~~~~~a~~~g~~~~~------~~~e~ll~~~~~~ 70 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLR--N-AKYLEMGAMVGIDA---ASDGLARAQRMGVTTTY------AGVEGLIKLPEFA 70 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH--H-CSSEEEEEEECSCT---TCHHHHHHHHTTCCEES------SHHHHHHHSGGGG
T ss_pred CCCEEEEEcCcHHHHHHHHHHHh--h-CcCeEEEEEEeCCh---hhhHHHHHHHcCCCccc------CCHHHHHhccCCC
Confidence 468999999875 3333323321 1 12478887766442 23467889999988532 1123444421 2
Q ss_pred CCCEEEEE
Q 020794 204 NTDFLVLA 211 (321)
Q Consensus 204 ~~Dlivla 211 (321)
++|+++.+
T Consensus 71 ~iDvV~~a 78 (312)
T 1nvm_B 71 DIDFVFDA 78 (312)
T ss_dssp GEEEEEEC
T ss_pred CCcEEEEC
Confidence 57888775
No 114
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=60.71 E-value=15 Score=36.26 Aligned_cols=68 Identities=16% Similarity=0.049 Sum_probs=44.2
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHH
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~ 112 (321)
.+..++++ +|+||-.+++=+.++.+|+|+..+...-. ..+.+.-+..+++. ..+-+.++++|+.+.+.
T Consensus 34 KTSLiFsl--~n~pGAL~~~L~~Fa~~gINLTkIESRPs-k~~~~eY~FfVD~e--h~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 34 AISLIFSL--KEEVGALAKVLRLFEENDINLTHIESRPS-RLNKDEYEFFTYLD--KRTKPVLGSIIKSLRND 101 (429)
T ss_dssp CEEEEEEE--ECCTTHHHHHHHHHHTTTCCTTSEEEEEC-SSCTTEEEEEECBC--GGGHHHHHHHHHHHHHT
T ss_pred eEEEEEEe--CCCccHHHHHHHHHHHcCCceEEEEeeec-CCCCccEEEEEEEe--eCCCHHHHHHHHHHHhh
Confidence 34445555 89999999999999999999998776522 11222223334443 22345688888877554
No 115
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=60.68 E-value=11 Score=34.53 Aligned_cols=48 Identities=17% Similarity=0.214 Sum_probs=26.8
Q ss_pred CCeeEEEEEeCCc-hh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 127 PKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 127 ~~~rIavl~S~~g-~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
+++||+|+|.|.- .. +..+.. .+ ..++++|+..... ...++++++|+|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~---~~--~~~~~av~d~~~~----~~~~~a~~~~~~ 53 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRL---AG--NGEVVAVSSRTLE----SAQAFANKYHLP 53 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHH---HC--SEEEEEEECSCSS----TTCC---CCCCS
T ss_pred CceEEEEEechHHHHHHHHHHHh---CC--CcEEEEEEcCCHH----HHHHHHHHcCCC
Confidence 4689999999863 32 233322 12 3788888754422 345667778887
No 116
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=60.46 E-value=18 Score=33.45 Aligned_cols=51 Identities=12% Similarity=0.131 Sum_probs=29.4
Q ss_pred CCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 126 ~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
.+++||+|++.|.-.. .++..+... -..++++|+... .....++++++|+|
T Consensus 4 ~~~~~vgiiG~G~ig~--~~~~~l~~~-~~~~lv~v~d~~----~~~~~~~a~~~~~~ 54 (362)
T 1ydw_A 4 ETQIRIGVMGCADIAR--KVSRAIHLA-PNATISGVASRS----LEKAKAFATANNYP 54 (362)
T ss_dssp --CEEEEEESCCTTHH--HHHHHHHHC-TTEEEEEEECSS----HHHHHHHHHHTTCC
T ss_pred CCceEEEEECchHHHH--HHHHHHhhC-CCcEEEEEEcCC----HHHHHHHHHHhCCC
Confidence 3578999999886321 122222221 137888776543 23456788888874
No 117
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=59.89 E-value=15 Score=35.30 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=30.4
Q ss_pred CCeeEEEEEe----CC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 127 PKYKVAVLAS----KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 127 ~~~rIavl~S----~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
+++||+|++. |. |......|.... + .+++++|+... .....++++++|+|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~-~--~~~lvav~d~~----~~~~~~~a~~~g~~ 73 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLS-S--QFQITALYSPK----IETSIATIQRLKLS 73 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTT-T--TEEEEEEECSS----HHHHHHHHHHTTCT
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcC-C--CeEEEEEEeCC----HHHHHHHHHHcCCC
Confidence 4689999998 44 333222233210 1 37888876543 23466788889987
No 118
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=57.64 E-value=11 Score=31.23 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=29.0
Q ss_pred EEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeee
Q 020794 43 GIHVFHC---PDEVGIVAKLSECIASRGGNILAADVF 76 (321)
Q Consensus 43 ~Iltv~G---~Dr~GIVA~VS~~La~~G~NI~d~~q~ 76 (321)
-.+++.| -|-.|++|+|++.|+++|+-|--++.+
T Consensus 72 r~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iSty 108 (133)
T 1zvp_A 72 SLITLTVHSSLEAVGLTAAFATKLAEHGISANVIAGY 108 (133)
T ss_dssp EEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEECS
T ss_pred EEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 3577766 599999999999999999999888876
No 119
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=56.41 E-value=21 Score=32.68 Aligned_cols=68 Identities=13% Similarity=0.162 Sum_probs=38.2
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc--
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~-- 203 (321)
+++||+|+|.|. |..+ +..++.. ...++++|+... .....++++++|++++ . ++.+++.
T Consensus 3 ~~~rvgiiG~G~~g~~~---~~~l~~~-~~~~l~av~d~~----~~~~~~~a~~~g~~~~--~--------~~~~~l~~~ 64 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVH---AANIAAN-PDLELVVIADPF----IEGAQRLAEANGAEAV--A--------SPDEVFARD 64 (344)
T ss_dssp CCEEEEEECCSHHHHHH---HHHHHHC-TTEEEEEEECSS----HHHHHHHHHTTTCEEE--S--------SHHHHTTCS
T ss_pred CceEEEEECCcHHHHHH---HHHHHhC-CCcEEEEEECCC----HHHHHHHHHHcCCcee--C--------CHHHHhcCC
Confidence 468999999876 3332 2222221 137888776543 2345677888885443 2 1233443
Q ss_pred CCCEEEEEe
Q 020794 204 NTDFLVLAR 212 (321)
Q Consensus 204 ~~Dlivlag 212 (321)
++|+++++.
T Consensus 65 ~~D~V~i~t 73 (344)
T 3euw_A 65 DIDGIVIGS 73 (344)
T ss_dssp CCCEEEECS
T ss_pred CCCEEEEeC
Confidence 567776654
No 120
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=56.34 E-value=17 Score=33.17 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=28.3
Q ss_pred CCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcC
Q 020794 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHG 181 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~g 181 (321)
+++||+|+|.|..+.. .++..++.. ..++++|+.... ....+++++++
T Consensus 3 ~~~rvgiiG~G~~~~~-~~~~~l~~~--~~~lvav~d~~~----~~~~~~a~~~~ 50 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIY-DMCQQLIDA--GAELAGVFESDS----DNRAKFTSLFP 50 (336)
T ss_dssp -CCEEEEECCSSTHHH-HHHHHHHHT--TCEEEEEECSCT----TSCHHHHHHST
T ss_pred CccEEEEECCChHHHH-HhhhhhcCC--CcEEEEEeCCCH----HHHHHHHHhcC
Confidence 3689999999875431 223332222 478888876542 23456777774
No 121
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=56.03 E-value=16 Score=33.68 Aligned_cols=51 Identities=10% Similarity=0.027 Sum_probs=31.5
Q ss_pred CCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCE
Q 020794 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (321)
+++||+|++.|.-. ..++..++.. -..++++|+... .....++++++|++.
T Consensus 4 ~~~~vgiiG~G~~g--~~~~~~l~~~-~~~~lvav~d~~----~~~~~~~~~~~g~~~ 54 (354)
T 3db2_A 4 NPVGVAAIGLGRWA--YVMADAYTKS-EKLKLVTCYSRT----EDKREKFGKRYNCAG 54 (354)
T ss_dssp CCEEEEEECCSHHH--HHHHHHHTTC-SSEEEEEEECSS----HHHHHHHHHHHTCCC
T ss_pred CcceEEEEccCHHH--HHHHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHcCCCC
Confidence 46899999987522 2233433322 147888776543 234667788888876
No 122
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=55.95 E-value=38 Score=30.79 Aligned_cols=52 Identities=6% Similarity=0.011 Sum_probs=30.4
Q ss_pred CCCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCE
Q 020794 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (321)
Q Consensus 126 ~~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (321)
.+++||+|+|.|. |.... ..+++....+++++|+... .....++++++|++.
T Consensus 6 ~~~~~v~iiG~G~ig~~~~---~~l~~~~~~~~~vav~d~~----~~~~~~~a~~~g~~~ 58 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHA---RHLVNKIQGVKLVAACALD----SNQLEWAKNELGVET 58 (346)
T ss_dssp CCCEEEEEECCSTTHHHHH---HHHHHTCSSEEEEEEECSC----HHHHHHHHHTTCCSE
T ss_pred CCcceEEEEcCCHHHHHHH---HHHHhcCCCcEEEEEecCC----HHHHHHHHHHhCCCc
Confidence 4679999999876 33322 2222011147888776543 224556778888863
No 123
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=55.89 E-value=14 Score=34.86 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=42.2
Q ss_pred CCCeeEEEEEeCC----chh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC--EEEEcCCcchhHHHH
Q 020794 126 DPKYKVAVLASKQ----EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEEL 198 (321)
Q Consensus 126 ~~~~rIavl~S~~----g~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP--~~~~~~~~~~~~~~~ 198 (321)
.+++||+|+|.|. |.. +.++. . .+ ..++++++++++ .....++|+++|+| -.+ . .-+++
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~-~--~~--~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~-~-----~~~~l 75 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAAL-R--DN--TFVLVAGAFDID---PIRGSAFGEQLGVDSERCY-A-----DYLSM 75 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHH-G--GG--SEEEEEEECCSS---HHHHHHHHHHTTCCGGGBC-S-----SHHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHh-h--CC--CeEEEEEEeCCC---HHHHHHHHHHhCCCcceee-C-----CHHHH
Confidence 3578999999997 222 22222 1 12 368887555553 23567888999997 222 1 12344
Q ss_pred HHHh----cCCCEEEEEee
Q 020794 199 LELV----QNTDFLVLARY 213 (321)
Q Consensus 199 ~~~l----~~~Dlivlag~ 213 (321)
++-- .++|.|+++.-
T Consensus 76 l~~~~~~~~~vD~V~i~tp 94 (398)
T 3dty_A 76 FEQEARRADGIQAVSIATP 94 (398)
T ss_dssp HHHHTTCTTCCSEEEEESC
T ss_pred HhcccccCCCCCEEEECCC
Confidence 4431 14788877643
No 124
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=55.81 E-value=33 Score=26.09 Aligned_cols=57 Identities=18% Similarity=0.091 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEE
Q 020794 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVI 162 (321)
Q Consensus 102 L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vi 162 (321)
++--...+|.++|+.-|-.+.++ . +|-+.+.|....+.++++.++.+..++.|.-|-
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~~~p~a~V~~v~ 73 (91)
T 2fhm_A 17 FRYFVQMEADKRKLAGWVKNRDD--G--RVEILAEGPENALQSFVEAVKNGSPFSKVTDIS 73 (91)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEECHHHHHHHHHHHHTTCSSSEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEE
Confidence 45666778899998776433332 2 678888888888999999998887668887663
No 125
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=55.54 E-value=75 Score=30.89 Aligned_cols=130 Identities=10% Similarity=0.099 Sum_probs=64.2
Q ss_pred CCeeEEEEEe-----CCchh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHH----HHHHHcCCCEEEEcCCcchhHH
Q 020794 127 PKYKVAVLAS-----KQEHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI----RFLERHGIPYHYLCAKENEREE 196 (321)
Q Consensus 127 ~~~rIavl~S-----~~g~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~----~~a~~~gIP~~~~~~~~~~~~~ 196 (321)
+.+||++++- |.+.+ ...++..+. .+..++.. ++.+.-.+...+. ++|++.|..+....
T Consensus 190 ~Glkva~vgd~~~~~G~~nnVa~Sli~~~~--~lG~~v~~-~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~-------- 258 (399)
T 3q98_A 190 KGKKIAMTWAYSPSYGKPLSVPQGIIGLMT--RFGMDVTL-AHPEGYDLIPDVVEVAKNNAKASGGSFRQVT-------- 258 (399)
T ss_dssp TTCEEEEECCCCSSCCCCTHHHHHHHHHHG--GGTCEEEE-ECCTTCCCCHHHHHHHHHHHHHHTCEEEEES--------
T ss_pred CCCEEEEEEecccccCcchHHHHHHHHHHH--HcCCEEEE-ECCcccCCCHHHHHHHHHHHHHcCCEEEEEc--------
Confidence 3468888752 44433 344444432 23456553 2322111222333 34567788776543
Q ss_pred HHHHHhcCCCEEEEEeeccccchhhHhhh-----hhhhhhhhccc--CcccccccccCChhHHhhcCC-CeEEecCCCCC
Q 020794 197 ELLELVQNTDFLVLARYMQPVPLQKEAYL-----GYKLLESLSSK--GSLTSYFNMILSGKFLRSYGK-DVINIHHGLLP 268 (321)
Q Consensus 197 ~~~~~l~~~Dlivlag~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~il~~~~l~~~~~-~~INiHpslLP 268 (321)
++.+.++++|+|.+-.|.- .-.+.|.+. +|.-....+.. .....+-+|.+..++++..+. .+|=+|| ||
T Consensus 259 d~~eav~~aDvVytd~W~S-mg~~~er~~~~~~~~~~~~~~~e~~~~~r~~~~~~yqVn~elm~~a~~~daifMHc--LP 335 (399)
T 3q98_A 259 SMEEAFKDADIVYPKSWAP-YKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHC--LP 335 (399)
T ss_dssp CHHHHHTTCSEEEECCCCC-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTTCCBCHHHHHTSGGGCCEECCC--SS
T ss_pred CHHHHhCCCCEEEecCccc-cchhhhhhhhccccchhhhhhhhhhhhHHHHHccCcEECHHHHhhcCCCCcEEECC--CC
Confidence 1334456899998877732 000111110 01000000000 001123357999999988753 7899998 78
Q ss_pred CC
Q 020794 269 SF 270 (321)
Q Consensus 269 ~y 270 (321)
++
T Consensus 336 a~ 337 (399)
T 3q98_A 336 AD 337 (399)
T ss_dssp CC
T ss_pred CC
Confidence 88
No 126
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=55.24 E-value=19 Score=33.64 Aligned_cols=71 Identities=11% Similarity=0.103 Sum_probs=36.4
Q ss_pred CCCCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc
Q 020794 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (321)
Q Consensus 125 ~~~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (321)
..++|||+|+|+|. |+.+...|. +. .+|..+ +.. ..-++.+++ .++...++. ...+++.++++
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~---~~---~~v~~~--~~~----~~~~~~~~~-~~~~~~~d~---~d~~~l~~~~~ 76 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLK---DE---FDVYIG--DVN----NENLEKVKE-FATPLKVDA---SNFDKLVEVMK 76 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHT---TT---SEEEEE--ESC----HHHHHHHTT-TSEEEECCT---TCHHHHHHHHT
T ss_pred cCCccEEEEECCCHHHHHHHHHHh---cC---CCeEEE--EcC----HHHHHHHhc-cCCcEEEec---CCHHHHHHHHh
Confidence 45789999999854 343333332 22 455432 221 112333332 344444442 23456777788
Q ss_pred CCCEEEEE
Q 020794 204 NTDFLVLA 211 (321)
Q Consensus 204 ~~Dlivla 211 (321)
++|+||.+
T Consensus 77 ~~DvVi~~ 84 (365)
T 3abi_A 77 EFELVIGA 84 (365)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEe
Confidence 99998876
No 127
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=54.92 E-value=13 Score=29.54 Aligned_cols=65 Identities=20% Similarity=0.074 Sum_probs=35.5
Q ss_pred CCCCeeEEEEEeCCchh--H-HHHHHhhhcCCcCeeEEEEEeC-CCCC----------CC-----chHHHHHHHcCCCEE
Q 020794 125 IDPKYKVAVLASKQEHC--L-VDFLYGWQEGKLPVEITCVISN-HDRG----------PN-----SHVIRFLERHGIPYH 185 (321)
Q Consensus 125 ~~~~~rIavl~S~~g~~--l-~~lL~~~~~~~l~~~i~~Vis~-~~~~----------~~-----~~v~~~a~~~gIP~~ 185 (321)
..+++||.++.++..+. | +.+-+..++..++.++.++-.. .++. |+ ..+.+.|.++|||+.
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~ 82 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIV 82 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEE
Confidence 45788999888877642 2 2233334444567777653211 1110 01 234566677789998
Q ss_pred EEcC
Q 020794 186 YLCA 189 (321)
Q Consensus 186 ~~~~ 189 (321)
.++.
T Consensus 83 vI~~ 86 (108)
T 3nbm_A 83 ATRG 86 (108)
T ss_dssp ECCH
T ss_pred EeCH
Confidence 8873
No 128
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=54.80 E-value=15 Score=31.81 Aligned_cols=67 Identities=10% Similarity=0.125 Sum_probs=39.0
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (321)
++||+|++.|. |..+...|.. .| +++..+ .+++ ...+.+++++.|+.... + .. + .++++|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g---~~V~~v-~~r~---~~~~~~l~~~~g~~~~~-~-----~~-~---~~~~aD 83 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQ---IPAIIA-NSRG---PASLSSVTDRFGASVKA-V-----EL-K---DALQAD 83 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TT---CCEEEE-CTTC---GGGGHHHHHHHTTTEEE-C-----CH-H---HHTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CEEEEE-ECCC---HHHHHHHHHHhCCCccc-C-----hH-H---HHhcCC
Confidence 57999999776 4444433322 23 466543 4442 23566777788876543 1 11 1 234799
Q ss_pred EEEEEee
Q 020794 207 FLVLARY 213 (321)
Q Consensus 207 livlag~ 213 (321)
+++++--
T Consensus 84 vVilavp 90 (220)
T 4huj_A 84 VVILAVP 90 (220)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9998853
No 129
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=54.48 E-value=80 Score=29.40 Aligned_cols=51 Identities=20% Similarity=0.161 Sum_probs=32.9
Q ss_pred HhcCCCEEEEEeeccc-cchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCC
Q 020794 201 LVQNTDFLVLARYMQP-VPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGL 266 (321)
Q Consensus 201 ~l~~~Dlivlag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpsl 266 (321)
.++++|++.+-.|..- .|-+ +.|..+ .-+|.+..++++..+..+|=+||.+
T Consensus 210 av~~aDvvyt~~~q~er~~~~-~~~~~~--------------~~~y~v~~~~l~~a~~~ai~mH~lP 261 (299)
T 1pg5_A 210 VINEVDVLYVTRIQKERFVDE-MEYEKI--------------KGSYIVSLDLANKMKKDSIILHPLP 261 (299)
T ss_dssp TGGGCSEEEEECCCSTTSSCH-HHHHHH--------------GGGGSBCHHHHHTSCTTCEEECCSC
T ss_pred HhcCCCEEEeCCcccccccCH-HHHHHh--------------hcCcccCHHHHHhcCCCCEEECCCC
Confidence 3458999999888430 0000 111110 1245899999999988999999966
No 130
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=54.45 E-value=89 Score=27.33 Aligned_cols=116 Identities=11% Similarity=0.032 Sum_probs=64.5
Q ss_pred CCCeeEEEEEeCCchhHHH---HHHhhhcCCcCeeEEEEEeCCCCCCC---chHHHHHHHcCCCEEEEcCCcchhHHHHH
Q 020794 126 DPKYKVAVLASKQEHCLVD---FLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAKENEREEELL 199 (321)
Q Consensus 126 ~~~~rIavl~S~~g~~l~~---lL~~~~~~~l~~~i~~Vis~~~~~~~---~~v~~~a~~~gIP~~~~~~~~~~~~~~~~ 199 (321)
....||+|-..++..+.++ .+...+. ...++..+-...+.... ..+.++++++|+++...-..+ ...+++.
T Consensus 168 ~~~~~Ilv~~d~s~~s~~al~~a~~la~~--~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g-~~~~~I~ 244 (294)
T 3loq_A 168 SLFDRVLVAYDFSKWADRALEYAKFVVKK--TGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESG-TPHKAIL 244 (294)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHHHHHH--HTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECS-CHHHHHH
T ss_pred ccCCEEEEEECCCHHHHHHHHHHHHHhhh--cCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecC-CHHHHHH
Confidence 3457888877666543222 2222211 13455544433321111 245667788899966433222 3446677
Q ss_pred HHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCC
Q 020794 200 ELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHG 265 (321)
Q Consensus 200 ~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHps 265 (321)
+..+ ++|++|+..+.+- .+.++ +-+=...+++...+.+++=+|+.
T Consensus 245 ~~a~~~~~dLlV~G~~~~~------~~~~~---------------~~Gs~~~~vl~~~~~pvLvv~~~ 291 (294)
T 3loq_A 245 AKREEINATTIFMGSRGAG------SVMTM---------------ILGSTSESVIRRSPVPVFVCKRG 291 (294)
T ss_dssp HHHHHTTCSEEEEECCCCS------CHHHH---------------HHHCHHHHHHHHCSSCEEEECSC
T ss_pred HHHHhcCcCEEEEeCCCCC------Cccce---------------eeCcHHHHHHhcCCCCEEEECCC
Confidence 7765 7999999988771 01111 11134567778888888888774
No 131
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=53.37 E-value=32 Score=33.42 Aligned_cols=76 Identities=8% Similarity=0.129 Sum_probs=47.8
Q ss_pred eeEEEEEe-CC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcch---------hHHH
Q 020794 129 YKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE---------REEE 197 (321)
Q Consensus 129 ~rIavl~S-~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~---------~~~~ 197 (321)
+||+|+|| |+ |.+--+++.+ . -..+++++..++. -.-+.+.|++++..+..+...... -++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~---~-~~~~vvaL~a~~n---~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~ 76 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKK---V-KGIRLIGISFHSN---LELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHS 76 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH---S-CSEEEEEEEESSC---HHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTH
T ss_pred ceEEEECCCCHHHHHHHHHHHh---C-CCeEEEEEEccCC---HHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHH
Confidence 79999996 54 4443444443 2 1478998877652 246788899999988766532211 1234
Q ss_pred HHHHhc--CCCEEEEE
Q 020794 198 LLELVQ--NTDFLVLA 211 (321)
Q Consensus 198 ~~~~l~--~~Dlivla 211 (321)
+.+++. ++|+++.+
T Consensus 77 l~el~~~~~~D~Vv~A 92 (376)
T 3a06_A 77 IEEMLEALKPDITMVA 92 (376)
T ss_dssp HHHHHHHHCCSEEEEC
T ss_pred HHHHhcCCCCCEEEEE
Confidence 455554 68988776
No 132
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=52.69 E-value=55 Score=29.75 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=34.7
Q ss_pred CCCCeeEEEEEeCCc-h--hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcC
Q 020794 125 IDPKYKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 125 ~~~~~rIavl~S~~g-~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (321)
...+|||++++.+.+ + .+..|.+.+++. .++|..+ +.. ...+...+.|+++..++.
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~v~-~~~------~~~~~~~~~g~~~~~~~~ 75 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVTFA-TGE------GFAGTLRKLGFEPVATGM 75 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEE-ECG------GGHHHHHHTTCEEEECCC
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEEEE-ccH------HHHHHHHhcCCceeecCc
Confidence 456799998886653 2 233455554433 3787755 432 236777888999988763
No 133
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=52.33 E-value=39 Score=30.89 Aligned_cols=69 Identities=12% Similarity=0.114 Sum_probs=39.4
Q ss_pred CeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc--CC
Q 020794 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (321)
Q Consensus 128 ~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~~ 205 (321)
++||+|+|.|.-. ..++..+.+. -..++++|+... .....++++++|++..+-+ +.+++. ++
T Consensus 2 ~~rvgiIG~G~~g--~~~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~~~~~---------~~~ll~~~~~ 65 (344)
T 3ezy_A 2 SLRIGVIGLGRIG--TIHAENLKMI-DDAILYAISDVR----EDRLREMKEKLGVEKAYKD---------PHELIEDPNV 65 (344)
T ss_dssp CEEEEEECCSHHH--HHHHHHGGGS-TTEEEEEEECSC----HHHHHHHHHHHTCSEEESS---------HHHHHHCTTC
T ss_pred eeEEEEEcCCHHH--HHHHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHhCCCceeCC---------HHHHhcCCCC
Confidence 4799999987521 1233333321 147888776543 2356778888998744311 222333 57
Q ss_pred CEEEEEe
Q 020794 206 DFLVLAR 212 (321)
Q Consensus 206 Dlivlag 212 (321)
|+++++.
T Consensus 66 D~V~i~t 72 (344)
T 3ezy_A 66 DAVLVCS 72 (344)
T ss_dssp CEEEECS
T ss_pred CEEEEcC
Confidence 7777664
No 134
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=51.65 E-value=38 Score=32.86 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=36.5
Q ss_pred CeeEEEEEe-CC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcC
Q 020794 128 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 128 ~~rIavl~S-~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (321)
++||+++|| |+ |+...+++.+. .-..+++++.+++. -..+.+.|+++++.+..+..
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~---p~~~~v~al~ag~n---i~~l~~~~~~f~~~~v~v~d 61 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERN---LDRYQVIALTANRN---VKDLADAAKRTNAKRAVIAD 61 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT---GGGEEEEEEEESSC---HHHHHHHHHHTTCSEEEESC
T ss_pred ceEEEEECCCeEeHHHHHHHHHhC---cCcEEEEEEEcCCC---HHHHHHHHHHcCCcEEEEcC
Confidence 479999998 65 55545555542 11267777766542 23567888999998876653
No 135
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=51.65 E-value=20 Score=31.02 Aligned_cols=82 Identities=13% Similarity=0.186 Sum_probs=43.9
Q ss_pred CCCeeEEEEEeCCc--hh-HHHHHHhhhcC-CcCeeEE--EEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHH
Q 020794 126 DPKYKVAVLASKQE--HC-LVDFLYGWQEG-KLPVEIT--CVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (321)
Q Consensus 126 ~~~~rIavl~S~~g--~~-l~~lL~~~~~~-~l~~~i~--~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~ 199 (321)
++++||.|+.+|+- |. .++++.....+ .+..+|. ++-..+..+.+...++.++++||++- ...+ ...+ +..
T Consensus 32 ~~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-hrar-~lt~-~d~ 108 (184)
T 4etn_A 32 RGSMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-HVSS-PLTE-ELM 108 (184)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-CBCC-BCCH-HHH
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-hccC-cCCH-HHc
Confidence 35789999998874 33 34555543221 1234442 22211222245677889999999976 3221 1122 222
Q ss_pred HHhcCCCEEEEEee
Q 020794 200 ELVQNTDFLVLARY 213 (321)
Q Consensus 200 ~~l~~~Dlivlag~ 213 (321)
..+|+|+...-
T Consensus 109 ---~~~DlIltMd~ 119 (184)
T 4etn_A 109 ---ESADLVLAMTH 119 (184)
T ss_dssp ---HHCSEEEESSH
T ss_pred ---CCCCEEEEcCc
Confidence 26899987543
No 136
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=50.97 E-value=30 Score=31.44 Aligned_cols=48 Identities=6% Similarity=0.042 Sum_probs=29.9
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
++||+|+|.|. |.... ..+... -..++++|+... .....++++++|++
T Consensus 3 ~~~vgiiG~G~~g~~~~---~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~ 51 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHA---KAVSGN-ADARLVAVADAF----PAAAEAIAGAYGCE 51 (331)
T ss_dssp CEEEEEECCSHHHHHHH---HHHHHC-TTEEEEEEECSS----HHHHHHHHHHTTCE
T ss_pred ceEEEEECCCHHHHHHH---HHHhhC-CCcEEEEEECCC----HHHHHHHHHHhCCC
Confidence 57999999876 33322 222221 147888776543 23567788889998
No 137
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=50.60 E-value=90 Score=28.42 Aligned_cols=55 Identities=4% Similarity=-0.113 Sum_probs=33.6
Q ss_pred CCCCeeEEEEEeCC-ch--hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 125 IDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 125 ~~~~~rIavl~S~~-g~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
..+++||+++..+. || .+..|.+.+++. .++|..+. .. ...+..++.|+++..++
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~v~~-~~------~~~~~~~~~G~~~~~~~ 74 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVSYVT-AG------GFAEPVRAAGATVVPYQ 74 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEE-CG------GGHHHHHHTTCEEEECC
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEEEEe-CH------HHHHHHHhcCCEEEecc
Confidence 44578999988764 33 234455554432 37877554 32 24667788899998776
No 138
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=50.55 E-value=36 Score=31.46 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=33.8
Q ss_pred CeeEEEEEeCC-chh--HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 128 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 128 ~~rIavl~S~~-g~~--l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
++||.+.+.|+ ||. ..+|.+.+++. .++|..|-+.+ . .-.+...+.|+|++.++
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~--g~~V~~vg~~~-g----~e~~~v~~~g~~~~~i~ 58 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR--GYAVHWLGTPR-G----IENDLVPKAGLPLHLIQ 58 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECSS-S----THHHHTGGGTCCEEECC
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC--CCEEEEEECCc-h----HhhchhhhcCCcEEEEE
Confidence 56899888877 564 34455555443 37887665433 1 12455678899998876
No 139
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=49.88 E-value=13 Score=36.32 Aligned_cols=61 Identities=15% Similarity=0.073 Sum_probs=41.4
Q ss_pred CCeeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCC-C-----CchHHHHHHHcCCCEEEEc
Q 020794 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-P-----NSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 127 ~~~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~-~-----~~~v~~~a~~~gIP~~~~~ 188 (321)
+..||+|..||.- .+|-.+|..++.. ...++.+|..||.-. . ...+.++|+++|||++++.
T Consensus 17 ~~~~vlVa~SGG~DS~~Ll~ll~~~~~~-~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~ 85 (464)
T 3a2k_A 17 EGAAVIVGVSGGPDSLALLHVFLSLRDE-WKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQ 85 (464)
T ss_dssp CSSBEEEECCSSHHHHHHHHHHHHHHHT-TTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEEcCcHHHHHHHHHHHHHHHH-cCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEE
Confidence 3468999999974 4565666554322 346788887777432 1 1357889999999998765
No 140
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=49.69 E-value=19 Score=29.78 Aligned_cols=63 Identities=14% Similarity=0.056 Sum_probs=42.9
Q ss_pred cccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 40 LTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 40 ~~~~Iltv~G~---Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
..-.+++++|. +++|+.+++-+.|+ |+||.-++|...+. .+.+.++ .+...++++.+-++|..
T Consensus 86 ~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~Se~----~is~vv~-------~~d~~~a~~~Lh~~f~~ 151 (157)
T 3mah_A 86 KDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGSNY----NVSVLVK-------AEDKKKALIALSNKLFN 151 (157)
T ss_dssp EEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSSSS----CEEEEEE-------GGGHHHHHHHHHHHHHC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCCCC----EEEEEEc-------HHHHHHHHHHHHHHHhc
Confidence 34578999997 58899999999999 99999999853211 2223332 35567778888777753
No 141
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=49.59 E-value=23 Score=34.06 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=31.5
Q ss_pred CCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 125 ~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
..+++||+|+|.|.-.. ..++..+... -..++++|+... .....++++++|+|
T Consensus 80 ~~~~irigiIG~G~~g~-~~~~~~l~~~-~~~~lvav~d~~----~~~~~~~a~~~g~~ 132 (433)
T 1h6d_A 80 EDRRFGYAIVGLGKYAL-NQILPGFAGC-QHSRIEALVSGN----AEKAKIVAAEYGVD 132 (433)
T ss_dssp CCCCEEEEEECCSHHHH-HTHHHHTTTC-SSEEEEEEECSC----HHHHHHHHHHTTCC
T ss_pred CCCceEEEEECCcHHHH-HHHHHHHhhC-CCcEEEEEEcCC----HHHHHHHHHHhCCC
Confidence 34578999999865210 1233333321 147888776543 23456788889987
No 142
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=49.14 E-value=15 Score=35.02 Aligned_cols=53 Identities=4% Similarity=-0.017 Sum_probs=29.1
Q ss_pred CCeeEEEEEeCCchhH-HHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 127 PKYKVAVLASKQEHCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l-~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
+++||+|++.|.++-+ ...+...+... ..++++.+++++ .....++|+++|+|
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~---~~~a~~~a~~~g~~ 89 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDD-HYELVAGALSST---PEKAEASGRELGLD 89 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTS-CEEEEEEECCSS---HHHHHHHHHHHTCC
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCC-CcEEEEEEeCCC---HHHHHHHHHHcCCC
Confidence 5789999999973211 11111111111 267876455542 23567788899997
No 143
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=48.70 E-value=38 Score=28.22 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=43.9
Q ss_pred CCCCCCeeEEEEEeCCc--hh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHH
Q 020794 123 PDIDPKYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (321)
Q Consensus 123 ~~~~~~~rIavl~S~~g--~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~ 199 (321)
+-...++||.|+.+|+- |. .++++.....+.+.++=+++ ....+.+...++.++++||++.....+ ... ++..
T Consensus 15 ~~~~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt--~~g~~~dp~a~~vl~e~Gidis~h~ar-~l~-~~~~ 90 (148)
T 3rh0_A 15 PRGSHMKSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGT--KPAQGLNQLSVESIAEVGADMSQGIPK-AID-PELL 90 (148)
T ss_dssp -----CCEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEES--SCCSSCCHHHHHHHHHTTCCCTTCCCC-BCC-HHHH
T ss_pred cCcCCCCEEEEECCCchhHHHHHHHHHHHhcCCCEEEEeccc--CCCCCCCHHHHHHHHHcCCCcCCCeee-ECC-HHHh
Confidence 33455779998888874 44 45677665433332332333 222334567889999999986321111 111 2222
Q ss_pred HHhcCCCEEEEE
Q 020794 200 ELVQNTDFLVLA 211 (321)
Q Consensus 200 ~~l~~~Dlivla 211 (321)
..+|+|+..
T Consensus 91 ---~~~DlIitM 99 (148)
T 3rh0_A 91 ---RTVDRVVIL 99 (148)
T ss_dssp ---HHCSEEEEE
T ss_pred ---cCCCEEEEe
Confidence 268999876
No 144
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=48.30 E-value=59 Score=24.54 Aligned_cols=57 Identities=19% Similarity=0.148 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEE
Q 020794 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVI 162 (321)
Q Consensus 102 L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vi 162 (321)
++--...+|.++|+.-|-.+.++ . +|-+.+.|....+.++++.++++...+.|.-|-
T Consensus 17 FR~~v~~~A~~lgl~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~gP~~a~V~~v~ 73 (88)
T 1ulr_A 17 YRAFAQKKALELGLSGYAENLPD--G--RVEVVAEGPKEALELFLHHLKQGPRLARVEAVE 73 (88)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEESCHHHHHHHHHHHHHCSTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 45666778899998776433322 2 788888998888999999988776557777663
No 145
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=47.91 E-value=24 Score=35.27 Aligned_cols=65 Identities=11% Similarity=0.004 Sum_probs=49.4
Q ss_pred cccEEEEEEcC--CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 40 LTHGIHVFHCP--DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 40 ~~~~Iltv~G~--Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
..-.+++++|. ..+|+.+++-+.|+++|+||.-++|-..+ -.+.+.+ +.+...++++.+-+.|..
T Consensus 418 ~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqGsSe----i~Is~vV-------~~~d~~~Av~aLH~~f~~ 484 (510)
T 2cdq_A 418 KGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGASK----VNISFIV-------NEAEAEGCVQALHKSFFE 484 (510)
T ss_dssp EEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECTTC----SEEEEEE-------EHHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEecCCc----ceEEEEE-------eHHHHHHHHHHHHHHHhc
Confidence 35678999998 77899999999999999999999985321 1222323 346688889998888863
No 146
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=47.58 E-value=40 Score=33.43 Aligned_cols=60 Identities=8% Similarity=0.016 Sum_probs=41.3
Q ss_pred CCCCeeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCC---CCchHHHHHHHcCC-CEEEEcC
Q 020794 125 IDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG---PNSHVIRFLERHGI-PYHYLCA 189 (321)
Q Consensus 125 ~~~~~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~---~~~~v~~~a~~~gI-P~~~~~~ 189 (321)
..+..||++..||.- +++..+|.. .| .+|.+|..+.... .-..+.+.|++.|| |++.++-
T Consensus 7 l~~~~KVvVA~SGGlDSSvll~~L~e--~G---~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~ 72 (455)
T 1k92_A 7 LPVGQRIGIAFSGGLDTSAALLWMRQ--KG---AVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDC 72 (455)
T ss_dssp CCTTSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEEC
T ss_pred hcCCCeEEEEEcChHHHHHHHHHHHH--cC---CEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 345679999999973 444445543 23 6888887776432 12578999999999 7887763
No 147
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=47.45 E-value=67 Score=26.70 Aligned_cols=81 Identities=16% Similarity=0.144 Sum_probs=45.5
Q ss_pred CCCeeEEEEEeCCc--hh-HHHHHHhhhc--CCc--CeeEE--EEEeCC-CCCCCchHHHHHHHcCCCEEEEcCCcchhH
Q 020794 126 DPKYKVAVLASKQE--HC-LVDFLYGWQE--GKL--PVEIT--CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENERE 195 (321)
Q Consensus 126 ~~~~rIavl~S~~g--~~-l~~lL~~~~~--~~l--~~~i~--~Vis~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~ 195 (321)
++++||.|+.+|+- |. .++++..... | + ..+|. ++-..+ ..+.+....+.++++||++. ...+ ...+
T Consensus 2 ~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~g-l~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~ar-~l~~ 78 (161)
T 2cwd_A 2 DRPVRVLFVCLGNICRSPMAEGIFRKLLKERG-LEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HVAR-RLTR 78 (161)
T ss_dssp CCCEEEEEEESSSSSHHHHHHHHHHHHHHHHT-CTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CCCC-BCCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHHHHHcC-CCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-cccc-CCCH
Confidence 36789999998884 33 3456655332 2 2 23332 222212 22345678899999999975 3222 1122
Q ss_pred HHHHHHhcCCCEEEEEee
Q 020794 196 EELLELVQNTDFLVLARY 213 (321)
Q Consensus 196 ~~~~~~l~~~Dlivlag~ 213 (321)
+.. ..+|+|++..-
T Consensus 79 -~~~---~~~DlIi~M~~ 92 (161)
T 2cwd_A 79 -EDV---LAYDHILVMDR 92 (161)
T ss_dssp -HHH---HHCSEEEESSH
T ss_pred -hHh---ccCCEEEECCh
Confidence 222 26899987644
No 148
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=47.27 E-value=13 Score=27.90 Aligned_cols=43 Identities=21% Similarity=0.253 Sum_probs=25.1
Q ss_pred HHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcC
Q 020794 145 FLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 145 lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (321)
.+..+++|+ ++.+.+-.|-+..--..+..+|++++||+..++.
T Consensus 19 v~kai~~gk--aklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 19 TVKALKRGS--VKEVVVAKDADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp HHHHHTTTC--EEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHcCC--eeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 344445553 5555333332211124578889999999999873
No 149
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=44.85 E-value=1.1e+02 Score=24.25 Aligned_cols=65 Identities=14% Similarity=0.041 Sum_probs=47.0
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhc---CCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHH
Q 020794 40 LTHGIHVFHCPDEVGIVAKLSECIASR---GGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (321)
Q Consensus 40 ~~~~Iltv~G~Dr~GIVA~VS~~La~~---G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~ 111 (321)
...+-+.|+|++.++.+++|...+.++ +..+ .... ..+|.|.- +-+.+. ..+.+++.+-.++|++
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~---Ss~GkY~S-vtv~v~--v~S~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKP---SSKGNYHS-VSITIN--ATHIEQVETLYEELGK 101 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEE---SSCSSEEE-EEEEEC--CSSHHHHHHHHHHHSC
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecC---CCCCeEEE-EEEEEE--ECCHHHHHHHHHHHhc
Confidence 346889999999999999999999888 6776 3333 45788882 233332 2367888888887754
No 150
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=44.81 E-value=57 Score=29.34 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=28.9
Q ss_pred CCeeEEEEEeCC-chh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 127 PKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
+++||+|+|.|. |.. +...|. .. ...++++|+.... ....++++++|+|
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~---~~-~~~~lvav~d~~~----~~~~~~~~~~g~~ 54 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLA---AA-SDWTLQGAWSPTR----AKALPICESWRIP 54 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHH---SC-SSEEEEEEECSSC----TTHHHHHHHHTCC
T ss_pred CcceEEEECCCHHHHHHHHHHHH---hC-CCeEEEEEECCCH----HHHHHHHHHcCCC
Confidence 468999999876 322 222222 11 1378887765432 2456778888887
No 151
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=44.74 E-value=55 Score=30.98 Aligned_cols=119 Identities=11% Similarity=0.113 Sum_probs=68.7
Q ss_pred eCCchhHHHHHHh--h-h-cC--CcCeeEEEEEeCCCCCC----CchHHHHHHHcCCCEEEEcCCcchhH----------
Q 020794 136 SKQEHCLVDFLYG--W-Q-EG--KLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENERE---------- 195 (321)
Q Consensus 136 S~~g~~l~~lL~~--~-~-~~--~l~~~i~~Vis~~~~~~----~~~v~~~a~~~gIP~~~~~~~~~~~~---------- 195 (321)
+...|..|+|+|. + + .| .+. +...+..|++-. .......+.+.|+.+..+..++-...
T Consensus 143 ~~~~HPtQaLaDl~Ti~e~~g~~~l~--l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~ 220 (324)
T 1js1_X 143 AATRHPLQSFADLITIEEYKKTARPK--VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVE 220 (324)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSSSSCE--EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEE
T ss_pred CCCCCcHHHHHHHHHHHHHcCCCCee--EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEE
Confidence 3335777777764 2 2 24 433 444442222211 12456777888999887764432111
Q ss_pred HHHHHHhcCCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCC
Q 020794 196 EELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (321)
Q Consensus 196 ~~~~~~l~~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~ 273 (321)
.++.+.++++|+|.+-.|.+ ..+....+...- +-+|.+..++++..+ .++=+|| ||.+||-
T Consensus 221 ~d~~eav~~aDvvy~~~w~s-------------~g~~~~~~~~~r-~~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg~ 281 (324)
T 1js1_X 221 YDQMKAFEGADFIYAKNWAA-------------YTGDNYGQILST-DRNWTVGDRQMAVTN-NAYFMHC--LPVRRNM 281 (324)
T ss_dssp SCHHHHHTTCSEEEECCCCC-------------CSTTCTTCCCCC-CTTSSBCHHHHTTSS-SCEEECC--SCCCBTT
T ss_pred CCHHHHhCCCCEEEecCccc-------------CCCccccchHHH-hcCcccCHHHHHhcC-CcEEECC--CCCCCCc
Confidence 12345556899998877854 000000000011 356799999999988 8999996 7999984
No 152
>1vmb_A 30S ribosomal protein S6; TM0603, structural genomics, JCSG, structure initiative, PSI, joint center for structural GENO translation; 1.70A {Thermotoga maritima} SCOP: d.58.14.1
Probab=44.66 E-value=71 Score=26.59 Aligned_cols=69 Identities=12% Similarity=0.121 Sum_probs=42.9
Q ss_pred CCCCccc-E-EEEEEcCC-----ccchHHHHHHHHHhc-CCeEeEeeeec---------cCCCCeEEEEEEEEeCCCCCC
Q 020794 36 VSPTLTH-G-IHVFHCPD-----EVGIVAKLSECIASR-GGNILAADVFV---------PEKKNVFYSRSEFIFDPIKWP 98 (321)
Q Consensus 36 ~~~~~~~-~-Iltv~G~D-----r~GIVA~VS~~La~~-G~NI~d~~q~~---------~~l~g~F~Mr~~v~~~~~~~~ 98 (321)
++|..|+ | ++.+.=|| ...+|..+.+.|.++ ||.|..++--. ...+|.|+ .+.|+.+.. .
T Consensus 13 ~~~~~Mr~YE~~~Il~P~l~ee~v~~~ve~~~~~I~~~~GG~I~~ve~wG~R~LAY~I~K~~~G~Yv-l~~f~a~~~--~ 89 (140)
T 1vmb_A 13 MAYVKERIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDYT-VIYFRCDGQ--N 89 (140)
T ss_dssp ----CCEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEEEEEETTEEEEEEE-EEEEEECSS--S
T ss_pred ccccccccceEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeecCcccccccCCCCEEEEE-EEEEEECHH--H
Confidence 5666775 3 45555666 458899999999999 99999876542 11245555 677777642 4
Q ss_pred hHHHHHHHH
Q 020794 99 REQMDEDFF 107 (321)
Q Consensus 99 ~~~L~~~L~ 107 (321)
.++|+..|.
T Consensus 90 i~ELer~lr 98 (140)
T 1vmb_A 90 LQELENFYR 98 (140)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHhc
Confidence 566665544
No 153
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=44.42 E-value=49 Score=29.87 Aligned_cols=49 Identities=14% Similarity=0.176 Sum_probs=27.8
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCE
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (321)
++||+|+|.|. |.. ++..+.... ..++++|+... .....++++++|++.
T Consensus 1 ~~~vgiiG~G~~g~~---~~~~l~~~~-~~~~~~v~d~~----~~~~~~~~~~~~~~~ 50 (325)
T 2ho3_A 1 MLKLGVIGTGAISHH---FIEAAHTSG-EYQLVAIYSRK----LETAATFASRYQNIQ 50 (325)
T ss_dssp CEEEEEECCSHHHHH---HHHHHHHTT-SEEEEEEECSS----HHHHHHHGGGSSSCE
T ss_pred CeEEEEEeCCHHHHH---HHHHHHhCC-CeEEEEEEeCC----HHHHHHHHHHcCCCe
Confidence 47999999875 222 222222211 47888776543 124556777788753
No 154
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=43.96 E-value=49 Score=28.29 Aligned_cols=57 Identities=12% Similarity=-0.083 Sum_probs=38.0
Q ss_pred CeeEEEEEeCCc-h-hHHHHHHhhhcCCcCeeEEEEEeCCCCC-CCchHHHHHHHcCCCEEEEcC
Q 020794 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 128 ~~rIavl~S~~g-~-~l~~lL~~~~~~~l~~~i~~Vis~~~~~-~~~~v~~~a~~~gIP~~~~~~ 189 (321)
.+||+|..||.- | .+..++.. . ..++.++..++... ....+.++|++.|||++.++-
T Consensus 6 ~~kv~v~~SGG~DS~~ll~ll~~--~---g~~v~~~~v~~~~~~~~~~~~~~a~~lgi~~~~~~~ 65 (203)
T 3k32_A 6 LMDVHVLFSGGKDSSLSAVILKK--L---GYNPHLITINFGVIPSYKLAEETAKILGFKHKVITL 65 (203)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHH--T---TEEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEEC
T ss_pred CCeEEEEEECcHHHHHHHHHHHH--c---CCCeEEEEEeCCCchHHHHHHHHHHHhCCCEEEEEC
Confidence 468999999973 3 34444432 2 35777776665322 235678999999999988763
No 155
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=43.85 E-value=25 Score=32.66 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=28.5
Q ss_pred CCeeEEEEEeCCc-hhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCE
Q 020794 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184 (321)
Q Consensus 127 ~~~rIavl~S~~g-~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~ 184 (321)
+++||+|+|.|.- ......|. .. -..++++|+.... .-.+.|++.|+++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~---~~-~~~~l~av~d~~~-----~~~~~a~~~g~~~ 53 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLAS---AA-DNLEVHGVFDILA-----EKREAAAQKGLKI 53 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHH---TS-TTEEEEEEECSSH-----HHHHHHHTTTCCB
T ss_pred CcCcEEEECcCHHHHHHHHHHH---hC-CCcEEEEEEcCCH-----HHHHHHHhcCCce
Confidence 4689999998752 22222222 21 1478888775431 2245677788864
No 156
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=43.64 E-value=96 Score=27.98 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=31.3
Q ss_pred CeeEEEEEeCC-chh--HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEE
Q 020794 128 KYKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (321)
Q Consensus 128 ~~rIavl~S~~-g~~--l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~ 187 (321)
+|||++++.+. ||. +..|...+++. .++|..+ +.. ...+.....|+++..+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~--GheV~v~-~~~------~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS--GHEVLIA-APP------ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT--TCEEEEE-ECH------HHHHHHHHBTCEEEEC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC--CCEEEEe-cCh------hhHHHHHhCCCceeee
Confidence 47999887554 442 33455554432 3787754 432 3456778899998877
No 157
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=43.33 E-value=95 Score=27.29 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=41.6
Q ss_pred HHHHHHHcCCCE--EEEcCCcchhHHHHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCC
Q 020794 173 VIRFLERHGIPY--HYLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILS 248 (321)
Q Consensus 173 v~~~a~~~gIP~--~~~~~~~~~~~~~~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 248 (321)
+.++++++|++. ..+. .+ ...+++.+..+ ++|++|+..+.+-- +.++-+ +=..
T Consensus 233 l~~~~~~~~~~~~~~~v~-~g-~~~~~I~~~a~~~~~dLiV~G~~g~~~------~~~~~~---------------Gsv~ 289 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVK-EG-LPEQVIPQVCEELNAGIVVLGILGRTG------LSAAFL---------------GNTA 289 (319)
T ss_dssp HHHHHHHTTCCGGGEEEE-ES-CHHHHHHHHHHHTTEEEEEEECCSCCS------THHHHH---------------HHHH
T ss_pred HHHHHHHhCCCcccEEEe-cC-CcHHHHHHHHHHhCCCEEEEeccCccC------Cccccc---------------cHHH
Confidence 456678888862 1121 12 23456777765 79999999887710 111111 1234
Q ss_pred hhHHhhcCCCeEEecCC
Q 020794 249 GKFLRSYGKDVINIHHG 265 (321)
Q Consensus 249 ~~~l~~~~~~~INiHps 265 (321)
.+++...+.+++=++|.
T Consensus 290 ~~vl~~~~~pVLvv~~~ 306 (319)
T 3olq_A 290 EQLIDHIKCDLLAIKPD 306 (319)
T ss_dssp HHHHTTCCSEEEEECCT
T ss_pred HHHHhhCCCCEEEECCC
Confidence 56777777788888764
No 158
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=43.31 E-value=56 Score=27.18 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=38.4
Q ss_pred CCeeEEEEEeCCchh---HHHHHH-hhhcCCc-CeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 127 PKYKVAVLASKQEHC---LVDFLY-GWQEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 127 ~~~rIavl~S~~g~~---l~~lL~-~~~~~~l-~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
+++-++=+++..+.. +.+.++ .+.+..+ +..|.++.|-..+.....++++|+++|+|+..++
T Consensus 9 p~~lvvGIGcrrg~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 9 PSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLA 75 (145)
T ss_dssp CCCEEEEEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEEC
T ss_pred CCeEEEEEeeCCCCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeC
Confidence 455556666777643 333332 2333333 4566666665444345678999999999999886
No 159
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=42.38 E-value=41 Score=32.18 Aligned_cols=58 Identities=14% Similarity=0.030 Sum_probs=38.5
Q ss_pred CCeeEEEEEeCCc-h-hHHHHHHhhhcCCcCeeEEEEEeCCCCCC-----------CchHHHHHHHcCCCEEEEcC
Q 020794 127 PKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 127 ~~~rIavl~S~~g-~-~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-----------~~~v~~~a~~~gIP~~~~~~ 189 (321)
+.+||+|..||.- | .+..+|.. . ..+|.+|..++-... ...+.++|++.|||++.++-
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~--~---G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~ 86 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQ--Q---GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNF 86 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHT--T---CCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCEEEEEEEChHHHHHHHHHHHH--c---CCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 4579999999973 4 34445543 2 378888877642111 13567889999999998873
No 160
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=42.27 E-value=58 Score=24.75 Aligned_cols=57 Identities=14% Similarity=0.100 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEE
Q 020794 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVI 162 (321)
Q Consensus 102 L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vi 162 (321)
++.-...+|.++|+.-|-.+.++ . +|-+.+.|....+.++++.++++...+.|.-|-
T Consensus 19 FR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~~G~~~~v~~f~~~l~~gP~~a~V~~v~ 75 (91)
T 1w2i_A 19 FRWSMQREARKLGVNGWVRNLPD--G--SVEAVLEGDEERVEALIGWAHQGPPLARVTRVE 75 (91)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEECCC--C--CEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 56667778899998776433322 2 677788888888999999988775557877663
No 161
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=41.99 E-value=1.7e+02 Score=26.42 Aligned_cols=54 Identities=15% Similarity=0.299 Sum_probs=33.2
Q ss_pred CCCeeEEEEEeCC-ch--hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 126 DPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 126 ~~~~rIavl~S~~-g~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
..+|||+++..+. |+ .+..|...+++. .++|..+ +.. ...+..+..|+++..++
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~--GheV~v~-~~~------~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAA--GHEVLVA-ASE------NMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEE-EEG------GGHHHHHHTTCCEEEEE
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHC--CCEEEEE-cCH------HHHHHHHhCCCeeEecC
Confidence 4568999886554 33 244555555433 3788754 432 24677788999998876
No 162
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=41.53 E-value=46 Score=25.93 Aligned_cols=69 Identities=19% Similarity=0.273 Sum_probs=36.9
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh--cC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--QN 204 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l--~~ 204 (321)
+++|+|+|.|. |..+...|.. .| ++++++-.+ ....+.+.+.|+++...+. .+++.++.+ .+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~--~g---~~V~~id~~------~~~~~~~~~~~~~~~~gd~----~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA--AG---KKVLAVDKS------KEKIELLEDEGFDAVIADP----TDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEESC------HHHHHHHHHTTCEEEECCT----TCHHHHHHSCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CC---CeEEEEECC------HHHHHHHHHCCCcEEECCC----CCHHHHHhCCccc
Confidence 45899988765 3444443332 23 466544322 1334556667887765442 123334333 37
Q ss_pred CCEEEEE
Q 020794 205 TDFLVLA 211 (321)
Q Consensus 205 ~Dlivla 211 (321)
+|+++++
T Consensus 71 ~d~vi~~ 77 (141)
T 3llv_A 71 VSAVLIT 77 (141)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 8988764
No 163
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=41.17 E-value=1.2e+02 Score=23.39 Aligned_cols=60 Identities=17% Similarity=0.238 Sum_probs=32.8
Q ss_pred CCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-----------CchHHHHHHHcCCCEEEEc
Q 020794 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 126 ~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-----------~~~v~~~a~~~gIP~~~~~ 188 (321)
.+++|++|+|+|.. -+.+++..+... ..++++++.+.+... ...+.++++++++....+.
T Consensus 2 ~~~~~vlIiGaG~~--g~~l~~~l~~~~-g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia 72 (141)
T 3nkl_A 2 NAKKKVLIYGAGSA--GLQLANMLRQGK-EFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLA 72 (141)
T ss_dssp -CCEEEEEECCSHH--HHHHHHHHHHSS-SEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEEC
T ss_pred CCCCEEEEECCCHH--HHHHHHHHHhCC-CcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEe
Confidence 35679999887653 233333333322 489999987653211 1234555566666555444
No 164
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.21 E-value=48 Score=27.12 Aligned_cols=71 Identities=13% Similarity=0.025 Sum_probs=38.4
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhc-CCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHH--h
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL--V 202 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~-~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~--l 202 (321)
..+||+|+|.|. |..+...|.. . | ++|+++ ... ..-.+.+.+.|+.+...+.. ..+.+.+. +
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~--~~g---~~V~vi-d~~-----~~~~~~~~~~g~~~~~gd~~---~~~~l~~~~~~ 103 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRA--RYG---KISLGI-EIR-----EEAAQQHRSEGRNVISGDAT---DPDFWERILDT 103 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHH--HHC---SCEEEE-ESC-----HHHHHHHHHTTCCEEECCTT---CHHHHHTBCSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--ccC---CeEEEE-ECC-----HHHHHHHHHCCCCEEEcCCC---CHHHHHhccCC
Confidence 457899998765 4455444432 2 3 455543 222 12345566788887654421 12223333 3
Q ss_pred cCCCEEEEE
Q 020794 203 QNTDFLVLA 211 (321)
Q Consensus 203 ~~~Dlivla 211 (321)
.++|++|++
T Consensus 104 ~~ad~vi~~ 112 (183)
T 3c85_A 104 GHVKLVLLA 112 (183)
T ss_dssp CCCCEEEEC
T ss_pred CCCCEEEEe
Confidence 478988874
No 165
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=39.43 E-value=1.4e+02 Score=29.25 Aligned_cols=26 Identities=12% Similarity=0.267 Sum_probs=21.7
Q ss_pred cccCChhHHhhcCC-CeEEecCCCCCCCC
Q 020794 244 NMILSGKFLRSYGK-DVINIHHGLLPSFK 271 (321)
Q Consensus 244 ~~il~~~~l~~~~~-~~INiHpslLP~yr 271 (321)
+|-+..++++..+. .+|=+|| ||++|
T Consensus 309 ~y~vt~elm~~ak~~dai~MHc--LPa~r 335 (418)
T 2yfk_A 309 DWECTEELMKTTKDGKALYMHC--LPADI 335 (418)
T ss_dssp TCCBCHHHHHTSGGGCCEECCC--SCCCE
T ss_pred hcCCCHHHHHhcCCCCeEEECC--CCCCC
Confidence 57899999998864 7999997 59985
No 166
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=39.23 E-value=41 Score=32.06 Aligned_cols=57 Identities=19% Similarity=0.234 Sum_probs=38.5
Q ss_pred CCeeEEEEEeCCc-h-hHHHHHHhhhcCCcCeeEEEEEeCCCCCC-----------CchHHHHHHHcCCCEEEEc
Q 020794 127 PKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 127 ~~~rIavl~S~~g-~-~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-----------~~~v~~~a~~~gIP~~~~~ 188 (321)
+.+||+|..||.- | .+..+|.. .| .+|.+|..++.... ...+.++|++.|||++.++
T Consensus 8 ~~~kVlVa~SGGvDSsv~a~lL~~--~G---~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~ 77 (376)
T 2hma_A 8 SKTRVVVGMSGGVDSSVTALLLKE--QG---YDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVN 77 (376)
T ss_dssp GGSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCeEEEEEeCHHHHHHHHHHHHH--cC---CcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 4579999999974 3 34444443 23 68888877653211 1246788999999999887
No 167
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=39.09 E-value=93 Score=28.36 Aligned_cols=53 Identities=11% Similarity=0.209 Sum_probs=32.6
Q ss_pred CCCeeEEEEEeCC-ch--hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 126 DPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 126 ~~~~rIavl~S~~-g~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
.++|||+++..+. |+ .+..|...+++- .++|..+ +. . ..+..+..|+++..++
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~-~~-~------~~~~~~~~G~~~~~~~ 73 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVLIA-VA-E------HADRAAAAGLEVVDVA 73 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEE-ES-S------CHHHHHTTTCEEEESS
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEEEe-cc-c------hHHHHHhCCCeeEecC
Confidence 3458999987553 33 244555555443 3787754 43 2 2566778899988776
No 168
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=38.87 E-value=56 Score=29.80 Aligned_cols=73 Identities=16% Similarity=0.303 Sum_probs=43.9
Q ss_pred eeEEEEEeCC-----chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc
Q 020794 129 YKVAVLASKQ-----EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (321)
Q Consensus 129 ~rIavl~S~~-----g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~ 203 (321)
|||+|.+-++ ||.++.|--+ ..|. ++.++....+ + .+.++.|.|+..++.. ..+++.++++
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA---~~l~-~v~F~~~~~~-~------~~~~~~g~~v~~l~~~---d~~~~~~~l~ 66 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLA---KQYS-DVSFACLPLE-G------SLIDEIPYPVYELSSE---SIYELINLIK 66 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHH---TTCS-SEEEEECCCT-T------CCGGGCCSCEEECSSS---CHHHHHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHH---HHHH-hCEEEEecCc-H------hHHHHCCCeEEEcCcc---CHHHHHHHHH
Confidence 5788887554 5655543222 2233 6666654332 1 1223448898877632 2356777775
Q ss_pred --CCCEEEEEeecc
Q 020794 204 --NTDFLVLARYMQ 215 (321)
Q Consensus 204 --~~Dlivlag~~~ 215 (321)
++|++|+-+|.-
T Consensus 67 ~~~~d~lIvD~Y~~ 80 (282)
T 3hbm_A 67 EEKFELLIIDHYGI 80 (282)
T ss_dssp HHTCSEEEEECTTC
T ss_pred hCCCCEEEEECCCC
Confidence 899999999964
No 169
>2j5a_A 30S ribosomal protein S6; ribonucleoprotein, RIBO protein S6, RNA-binding, rRNA-binding, protein folding; 2.3A {Aquifex aeolicus} SCOP: d.58.14.1
Probab=37.95 E-value=99 Score=24.31 Aligned_cols=60 Identities=17% Similarity=0.246 Sum_probs=38.7
Q ss_pred EEEEEcCC-----ccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEe-CCCCCChHHHHHHH
Q 020794 44 IHVFHCPD-----EVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIF-DPIKWPREQMDEDF 106 (321)
Q Consensus 44 Iltv~G~D-----r~GIVA~VS~~La~~G~NI~d~~q~~---------~~l~g~F~Mr~~v~~-~~~~~~~~~L~~~L 106 (321)
++.+.=|| ...+|..+.+.|.++||.|.+++--. ...+|.|+ .+.++. +.. ..++|+..|
T Consensus 12 ~~~Il~p~l~~e~~~~~v~~~~~~i~~~Gg~i~~~e~wG~R~LAY~I~K~~~G~Y~-l~~f~a~~~~--~i~eler~l 86 (110)
T 2j5a_A 12 TVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARYF-LVQFKTENPQ--LPNELDFQL 86 (110)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEEECSSCSSSCSEEEEE-EEEEEESCTT--HHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEeecCcccccCcCCCCEEEEE-EEEEEeCCHH--HHHHHHHHh
Confidence 34444555 46889999999999999999877542 12356555 777777 532 344444443
No 170
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=37.73 E-value=73 Score=24.80 Aligned_cols=58 Identities=19% Similarity=0.140 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEE
Q 020794 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVI 162 (321)
Q Consensus 101 ~L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vi 162 (321)
-++--...+|.++|+.-|-.+..+ . +|-+.+.|....+.++++.++.|...+.|.-|-
T Consensus 28 GFR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~gP~~A~V~~v~ 85 (101)
T 2bjd_A 28 GFRKFVQIHAIRLGIKGYAKNLPD--G--SVEVVAEGYEEALSKLLERIKQGPPAAEVEKVD 85 (101)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHHTTCSTTCEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEE
Confidence 356777788899998776433332 2 677888888888999999988884447777663
No 171
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=37.36 E-value=76 Score=23.99 Aligned_cols=71 Identities=8% Similarity=0.049 Sum_probs=34.7
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHH-hcCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 205 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~-l~~~ 205 (321)
.|||+|+|.|. |..+...|.. .| +++.++ ... ...+.+..++.|+.+...+. ...+.+.+. +.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~--~g---~~v~~~-d~~----~~~~~~~~~~~~~~~~~~d~---~~~~~l~~~~~~~~ 70 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE--KG---HDIVLI-DID----KDICKKASAEIDALVINGDC---TKIKTLEDAGIEDA 70 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TT---CEEEEE-ESC----HHHHHHHHHHCSSEEEESCT---TSHHHHHHTTTTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CeEEEE-ECC----HHHHHHHHHhcCcEEEEcCC---CCHHHHHHcCcccC
Confidence 47899987654 3344333322 23 566543 322 12334444456876554331 112233322 3479
Q ss_pred CEEEEE
Q 020794 206 DFLVLA 211 (321)
Q Consensus 206 Dlivla 211 (321)
|+++++
T Consensus 71 d~vi~~ 76 (140)
T 1lss_A 71 DMYIAV 76 (140)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 998876
No 172
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=37.22 E-value=73 Score=24.66 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEe
Q 020794 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (321)
Q Consensus 102 L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis 163 (321)
++--...+|.++|+.-|-.+..+ . +|-+.+.|....+.++++.++.|...+.|.-|-.
T Consensus 27 FR~~v~~~A~~lgL~G~VrN~~d--G--~Vei~~eG~~~~l~~f~~~l~~gPp~A~V~~v~~ 84 (98)
T 3trg_A 27 FRESVRKKAEELQLTGWVKNLSH--G--DVELVACGERDSIMILTEWLWEGPPQAAVSNVNW 84 (98)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEEE
T ss_pred ccHHHHHHHHHcCCeEEEEECCC--C--EEEEEEEECHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 45666778899998776443332 2 6778888888889999999888755577776643
No 173
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=37.11 E-value=96 Score=24.00 Aligned_cols=58 Identities=7% Similarity=-0.082 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhh-cCCcCeeEEEEEe
Q 020794 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVIS 163 (321)
Q Consensus 102 L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~-~~~l~~~i~~Vis 163 (321)
++--...+|.++|+.-|-.+..+ . +|-+.+.|....+.++++.++ +|...+.|.-|-.
T Consensus 26 FR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V~~v~~ 84 (102)
T 1urr_A 26 FRKHTSHEAKRLGVRGWCMNTRD--G--TVKGQLEAPMMNLMEMKHWLENNRIPNAKVSKAEF 84 (102)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTT--S--CEEEEEEECHHHHHHHHHHHHHCCSTTCEEEEEEE
T ss_pred hhHHHHHHHHHhCCcEEEEECCC--C--CEEEEEEcCHHHHHHHHHHHHhcCCCccEEEEEEE
Confidence 45666778899998776433332 2 677888888888999999988 5655578877644
No 174
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=36.68 E-value=80 Score=24.33 Aligned_cols=42 Identities=21% Similarity=0.295 Sum_probs=25.1
Q ss_pred HHHHHHHcCCCE-EEEcCCcchhHHHHHHHhc--CCCEEEEEeecc
Q 020794 173 VIRFLERHGIPY-HYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (321)
Q Consensus 173 v~~~a~~~gIP~-~~~~~~~~~~~~~~~~~l~--~~Dlivlag~~~ 215 (321)
+.+++++.|++. ...-..+ ...+++.+..+ ++|++|+....+
T Consensus 76 l~~~~~~~~~~~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~~ 120 (150)
T 3tnj_A 76 LSQIGNTLGIDPAHRWLVWG-EPREEIIRIAEQENVDLIVVGSHGR 120 (150)
T ss_dssp HHHHHHHHTCCGGGEEEEES-CHHHHHHHHHHHTTCSEEEEEEC--
T ss_pred HHHHHHHcCCCcceEEEecC-CHHHHHHHHHHHcCCCEEEEecCCC
Confidence 455677788883 2111111 23467777776 899999987765
No 175
>1cqm_A Ribosomal protein S6; alzheimer disease, oligomerization; 1.65A {Thermus thermophilus} SCOP: d.58.14.1 PDB: 1cqn_A 1qjh_A 1ris_A 1fka_F 1gix_I* 1hnw_F* 1hnx_F* 1hnz_F* 1hr0_F 1i94_F* 1i95_F* 1i96_F* 1i97_F* 1ibk_F* 1ibl_F* 1ibm_F 1j5e_F 1jgo_I* 1jgp_I* 1jgq_I* ...
Probab=36.44 E-value=1.2e+02 Score=23.43 Aligned_cols=41 Identities=5% Similarity=0.058 Sum_probs=29.5
Q ss_pred ccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEeC
Q 020794 52 EVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIFD 93 (321)
Q Consensus 52 r~GIVA~VS~~La~~G~NI~d~~q~~---------~~l~g~F~Mr~~v~~~ 93 (321)
...++..+.+.|.++||.|.+++--. ...+|.|+ .+.++.+
T Consensus 19 ~~~~~~~~~~~i~~~gg~i~~~e~wG~R~LAY~I~k~~~G~Y~-l~~f~a~ 68 (101)
T 1cqm_A 19 LALEKEIIQRALENYGARVEKVAILGLRRLAYPIAKDPQGYFL-WYQVEMP 68 (101)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEEETTEEEEEEE-EEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEeecCcccccCcCCCCEEEEE-EEEEEeC
Confidence 45788899999999999999876542 11245555 6677765
No 176
>3r8n_F 30S ribosomal protein S6; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_F 3fih_F* 3iy8_F 3j18_F* 2wwl_F 3oar_F 3oaq_F 3ofb_F 3ofa_F 3ofp_F 3ofx_F 3ofy_F 3ofo_F 3r8o_F 4a2i_F 4gd1_F 4gd2_F 2gy9_F 2gyb_F
Probab=36.37 E-value=34 Score=26.56 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=37.6
Q ss_pred CCccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEeCCCCCChHHHHHHHH
Q 020794 50 PDEVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIFDPIKWPREQMDEDFF 107 (321)
Q Consensus 50 ~Dr~GIVA~VS~~La~~G~NI~d~~q~~---------~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~ 107 (321)
.+...+|..+.+.|.++||.|.+++.-. ...+|.|+ .+.++.+.. ..++|+..|.
T Consensus 16 e~~~~~~~~~~~~i~~~gg~i~~~e~wG~r~LAY~I~k~~~G~Y~-l~~f~a~~~--~i~eler~lr 79 (100)
T 3r8n_F 16 EQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV-LMNVEAPQE--VIDELETTFR 79 (100)
T ss_dssp THHHHHHHHHHHHHHTTTCBCCCCEEEEEECCSSCTTSCSCEEEE-ECCEEECTT--TTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEeeecccCCeEcCCCCEEEEE-EEEEEeChH--HHHHHHHHhc
Confidence 3456788889999999999998876543 12356665 667777642 4566665554
No 177
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=36.09 E-value=78 Score=26.39 Aligned_cols=81 Identities=10% Similarity=0.041 Sum_probs=42.4
Q ss_pred CCeeEEEEEeCCc--hh-HHHHHHhhh-cCCc--CeeEE--EEEeCCC-CCCCchHHHHHHHcCCCEEEEcCCcchhHHH
Q 020794 127 PKYKVAVLASKQE--HC-LVDFLYGWQ-EGKL--PVEIT--CVISNHD-RGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (321)
Q Consensus 127 ~~~rIavl~S~~g--~~-l~~lL~~~~-~~~l--~~~i~--~Vis~~~-~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (321)
+++||.|+.+|+- |. .++++...- +..+ ..+|. ++-.-+. .+++....+.++++||++-. ..+ ...+ +
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~-~ar-~l~~-~ 79 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDS-ISR-PVVS-S 79 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCC-BCC-BCCH-H
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCC-eee-ECCH-H
Confidence 4678998888874 33 344555432 1112 13332 2222121 22456788999999999722 111 1122 2
Q ss_pred HHHHhcCCCEEEEEee
Q 020794 198 LLELVQNTDFLVLARY 213 (321)
Q Consensus 198 ~~~~l~~~Dlivlag~ 213 (321)
.. ..+|+|+...-
T Consensus 80 ~~---~~~DlIl~Md~ 92 (161)
T 3jvi_A 80 DF---KNFDYIFAMDN 92 (161)
T ss_dssp HH---HHCSEEEESSH
T ss_pred Hh---cCCCEEEEeCh
Confidence 22 26899987544
No 178
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=35.95 E-value=56 Score=25.73 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=38.1
Q ss_pred CeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCCE
Q 020794 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (321)
Q Consensus 128 ~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dl 207 (321)
.+||+|+|+|. --..++..+... .++ +.|+ ++. .....+++++.++++.... ++.+.+.++|+
T Consensus 21 ~~~v~iiG~G~--iG~~~a~~l~~~--g~~-v~v~-~r~---~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGM--LASEIAPYFSYP--QYK-VTVA-GRN---IDHVRAFAEKYEYEYVLIN--------DIDSLIKNNDV 83 (144)
T ss_dssp CCEEEEECCSH--HHHHHGGGCCTT--TCE-EEEE-ESC---HHHHHHHHHHHTCEEEECS--------CHHHHHHTCSE
T ss_pred CCEEEEECCCH--HHHHHHHHHHhC--CCE-EEEE-cCC---HHHHHHHHHHhCCceEeec--------CHHHHhcCCCE
Confidence 56999999754 222333333322 356 3343 442 2345677888887654322 12233458999
Q ss_pred EEEEee
Q 020794 208 LVLARY 213 (321)
Q Consensus 208 ivlag~ 213 (321)
++.+.-
T Consensus 84 vi~at~ 89 (144)
T 3oj0_A 84 IITATS 89 (144)
T ss_dssp EEECSC
T ss_pred EEEeCC
Confidence 987643
No 179
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=35.75 E-value=41 Score=28.52 Aligned_cols=70 Identities=13% Similarity=0.145 Sum_probs=35.0
Q ss_pred eeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHH-hcCCC
Q 020794 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNTD 206 (321)
Q Consensus 129 ~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~-l~~~D 206 (321)
|||+|+|.|. |..+...|.. .| ++++.+=.++ ..+.+++++.|+++...+.. ..+.+.+. +.++|
T Consensus 1 M~iiIiG~G~~G~~la~~L~~--~g---~~v~vid~~~-----~~~~~l~~~~~~~~i~gd~~---~~~~l~~a~i~~ad 67 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS--RK---YGVVIINKDR-----ELCEEFAKKLKATIIHGDGS---HKEILRDAEVSKND 67 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TT---CCEEEEESCH-----HHHHHHHHHSSSEEEESCTT---SHHHHHHHTCCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCH-----HHHHHHHHHcCCeEEEcCCC---CHHHHHhcCcccCC
Confidence 5888888654 3444433332 23 5666443222 23445566678887654321 12222222 33678
Q ss_pred EEEEE
Q 020794 207 FLVLA 211 (321)
Q Consensus 207 livla 211 (321)
.++++
T Consensus 68 ~vi~~ 72 (218)
T 3l4b_C 68 VVVIL 72 (218)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77654
No 180
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=35.75 E-value=68 Score=25.42 Aligned_cols=58 Identities=16% Similarity=0.285 Sum_probs=33.4
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-CchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
+.+|...+.+ .++.|+ +.++.+-.|-+... -..+..+|++++||+.++.. ..++=+.+
T Consensus 28 l~~G~~~v~k----al~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~s-----k~eLG~a~ 86 (119)
T 1rlg_A 28 VKKGTNETTK----AVERGL--AKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKS-----KNDLGRAV 86 (119)
T ss_dssp EEESHHHHHH----HHTTTC--CSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESC-----HHHHHHHT
T ss_pred eeECHHHHHH----HHHcCC--CcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCC-----HHHHHHHh
Confidence 4445444444 444554 55554444433211 36788999999999987763 23455555
No 181
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=35.42 E-value=85 Score=26.30 Aligned_cols=56 Identities=20% Similarity=0.141 Sum_probs=35.7
Q ss_pred CeeEEEEEeCCc-h-hHHHHHHhhhcCCcCeeEEEEEeCCCCCCC---chHHHHHHHcCCCEEEEc
Q 020794 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 128 ~~rIavl~S~~g-~-~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~---~~v~~~a~~~gIP~~~~~ 188 (321)
+.||+|..||.- | .+..++.. .+ .++.+|..++..... ..+.++|++.|||++.++
T Consensus 3 ~~~v~v~lSGG~DS~~ll~ll~~--~~---~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~ 63 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALK--EF---EEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLD 63 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEccCcHHHHHHHHHHHH--cC---CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 358999999973 3 34444443 23 467666655532111 256788899999998876
No 182
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=35.33 E-value=1.3e+02 Score=26.50 Aligned_cols=84 Identities=12% Similarity=0.175 Sum_probs=46.4
Q ss_pred CCCCeeEEEEEeCCc--hh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHH
Q 020794 125 IDPKYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (321)
Q Consensus 125 ~~~~~rIavl~S~~g--~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~ 201 (321)
...++||.|+.+|+- |. .++++.....+.+.+.=++ +....+.+....+.++++||++.....+ ...+ +..
T Consensus 78 ~~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAG--t~~g~~~dp~a~~vl~e~Gidis~~~sr-~l~~-~~~-- 151 (213)
T 3t38_A 78 ASPVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAG--SLPASEIHPLVLEILSERGVNISDAFPK-PLTD-DVI-- 151 (213)
T ss_dssp SSCCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEE--SSCCSSCCHHHHHHHHHTTCCCTTCCCC-BCCH-HHH--
T ss_pred cCCCCEEEEECCCchhHHHHHHHHHHHhccCceEEEecc--cCCCCCCCHHHHHHHHHcCCCcccCcCC-cCCH-HHh--
Confidence 345789999998874 43 3556665433322222223 2332334667889999999986311111 1111 222
Q ss_pred hcCCCEEEEEeecc
Q 020794 202 VQNTDFLVLARYMQ 215 (321)
Q Consensus 202 l~~~Dlivlag~~~ 215 (321)
..+|+|+...-..
T Consensus 152 -~~~DlIitMd~~~ 164 (213)
T 3t38_A 152 -RASDYVITMGCGD 164 (213)
T ss_dssp -HHCSEEEESSCCS
T ss_pred -ccCCEEEEecCcc
Confidence 2689998764433
No 183
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=34.74 E-value=42 Score=26.91 Aligned_cols=50 Identities=14% Similarity=0.305 Sum_probs=28.2
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-CchHHHHHHHcCCCEEEEcC
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~ 189 (321)
+.+|...+++++ +.|+ +..+.+-.|-+... -..+..+|+++|||+.+++.
T Consensus 21 l~~G~~~v~kai----~~gk--akLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~s 71 (121)
T 2lbw_A 21 VKRGVKEVVKAL----RKGE--KGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPS 71 (121)
T ss_dssp EEESHHHHHHHH----HHSC--CCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCC
T ss_pred ccccHHHHHHHH----HcCC--ceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECC
Confidence 444544455443 3453 45553333332111 23577899999999988763
No 184
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=34.48 E-value=43 Score=31.03 Aligned_cols=73 Identities=11% Similarity=0.033 Sum_probs=38.1
Q ss_pred CCCeeEEEEE-eCCc-h--hH----HHHHHhhh---cCCcC--eeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcc
Q 020794 126 DPKYKVAVLA-SKQE-H--CL----VDFLYGWQ---EGKLP--VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN 192 (321)
Q Consensus 126 ~~~~rIavl~-S~~g-~--~l----~~lL~~~~---~~~l~--~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~ 192 (321)
.+++||+++| .|.. . .+ .++...-. .+... .++ + +++++ .....++|+++|+|..+ .
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~-a-v~~~~---~~~a~~~a~~~~~~~~~-~---- 73 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDP-I-LVGRS---AEKVEALAKRFNIARWT-T---- 73 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEE-E-EECSS---SHHHHHHHHHTTCCCEE-S----
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceee-E-EEcCC---HHHHHHHHHHhCCCccc-C----
Confidence 4678999999 8873 2 22 44433200 00111 223 3 44442 23567888999998433 1
Q ss_pred hhHHHHHHHhc--CCCEEEEEe
Q 020794 193 EREEELLELVQ--NTDFLVLAR 212 (321)
Q Consensus 193 ~~~~~~~~~l~--~~Dlivlag 212 (321)
++.++++ ++|+++++.
T Consensus 74 ----~~~~ll~~~~iD~V~i~t 91 (383)
T 3oqb_A 74 ----DLDAALADKNDTMFFDAA 91 (383)
T ss_dssp ----CHHHHHHCSSCCEEEECS
T ss_pred ----CHHHHhcCCCCCEEEECC
Confidence 1223333 577777654
No 185
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=34.11 E-value=1e+02 Score=23.40 Aligned_cols=55 Identities=15% Similarity=0.077 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhh-hcCCcCeeEEEEE
Q 020794 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGW-QEGKLPVEITCVI 162 (321)
Q Consensus 104 ~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~-~~~~l~~~i~~Vi 162 (321)
.-...+|.++|+.-|-.+..+ . +|-+.+.|....+.++++.+ ++|...+.|.-|-
T Consensus 21 ~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~i~~f~~~l~~~gP~~a~V~~v~ 76 (92)
T 2gv1_A 21 YTTQYEAKRLGLTGYAKNLDD--G--SVEVVACGEEGQVEKLMQWLKSGGPRSARVERVL 76 (92)
T ss_dssp SHHHHHHHHHTCCCEEEECSS--S--CEEEEECSCHHHHHHHHHHHHHTSSTTSEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEECCC--C--cEEEEEEeCHHHHHHHHHHhhccCCCceEEEEEE
Confidence 345567888998776433332 2 78888888888899999998 7774447776653
No 186
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=33.19 E-value=55 Score=26.88 Aligned_cols=50 Identities=14% Similarity=0.217 Sum_probs=28.9
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCC-CCchHHHHHHHcCCCEEEEcC
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~-~~~~v~~~a~~~gIP~~~~~~ 189 (321)
+.+|...+++++ +.|+ +.++.+-.|-+.. --..+..+|+++|||+.+++.
T Consensus 33 l~~G~~~v~kai----~~gk--akLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s 83 (134)
T 2ale_A 33 LKKGANEATKTL----NRGI--SEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPS 83 (134)
T ss_dssp EEESHHHHHHHH----HHTC--EEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESC
T ss_pred cccCchHHHHHH----HhCC--CeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 444544444443 4453 5555443333221 134678999999999988763
No 187
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=32.37 E-value=1.4e+02 Score=21.60 Aligned_cols=73 Identities=18% Similarity=0.306 Sum_probs=38.3
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCC
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~ 205 (321)
+.+||+|+|.|. |..+...|.. .| ..+|.++ +++ ..-.+.+.+.++.....+. ...+++.+.+.++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~--~g--~~~v~~~--~r~----~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT--SS--NYSVTVA--DHD----LAALAVLNRMGVATKQVDA---KDEAGLAKALGGF 70 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH--CS--SEEEEEE--ESC----HHHHHHHHTTTCEEEECCT---TCHHHHHHHTTTC
T ss_pred CcCeEEEECCCHHHHHHHHHHHh--CC--CceEEEE--eCC----HHHHHHHHhCCCcEEEecC---CCHHHHHHHHcCC
Confidence 357899988733 3333322221 23 2555433 331 1223334466777665542 1234566667789
Q ss_pred CEEEEEe
Q 020794 206 DFLVLAR 212 (321)
Q Consensus 206 Dlivlag 212 (321)
|++|.+.
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9988764
No 188
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=32.36 E-value=59 Score=25.93 Aligned_cols=58 Identities=16% Similarity=0.340 Sum_probs=33.4
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-CchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
+.+|...+.+++ +.|+ +.++.+-.|-+... -..+..+|++++||+.++.. ..++=+.+
T Consensus 30 l~~G~~~v~kai----~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s-----k~eLG~a~ 88 (120)
T 1xbi_A 30 IKKGANEVTKAV----ERGI--AKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVAS-----KQDLGKAA 88 (120)
T ss_dssp EEESHHHHHHHH----HHTC--CSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESC-----HHHHHHHT
T ss_pred ccccHHHHHHHH----HcCC--ceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCC-----HHHHHHHh
Confidence 455544555444 3453 55554444432211 35788999999999987763 23455555
No 189
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=32.21 E-value=55 Score=31.50 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=29.8
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
.+++|.|+|.|. |..+...|.. .| +++++|=.++ ...+.+++.|+++.+.+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~--~g---~~vvvId~d~------~~v~~~~~~g~~vi~GD 54 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS--SG---VKMVVLDHDP------DHIETLRKFGMKVFYGD 54 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCH------HHHHHHHHTTCCCEESC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHhCCCeEEEcC
Confidence 356888888766 4555555543 23 4555443332 34566677888887654
No 190
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=32.14 E-value=81 Score=30.84 Aligned_cols=80 Identities=15% Similarity=0.211 Sum_probs=48.6
Q ss_pred CCCeeEEEEEeCC--chhHHHHHHhhhcCCcCeeEEEEEe-CCCCCCCchHHHHHHHcCCCEEEEcCCcch---------
Q 020794 126 DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVIS-NHDRGPNSHVIRFLERHGIPYHYLCAKENE--------- 193 (321)
Q Consensus 126 ~~~~rIavl~S~~--g~~l~~lL~~~~~~~l~~~i~~Vis-~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~--------- 193 (321)
+.++||+||||-. |..--+++.+ ..-..+|+++.. ++. -.-+.+.|++++-.+..+......
T Consensus 19 ~~mk~i~ILGSTGSIGtqtLdVi~~---~pd~f~V~aLaa~g~n---v~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~ 92 (398)
T 2y1e_A 19 DGRLRVVVLGSTGSIGTQALQVIAD---NPDRFEVVGLAAGGAH---LDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYH 92 (398)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHH---CTTTEEEEEEEECSSC---HHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEE
T ss_pred CCceEEEEEccCcHHHHHHHHHHHh---CCCceEEEEEEecCCC---HHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEe
Confidence 3457899999875 3333344443 332489998887 541 235678899999888776532110
Q ss_pred hHHHHHHHhc--CCCEEEEE
Q 020794 194 REEELLELVQ--NTDFLVLA 211 (321)
Q Consensus 194 ~~~~~~~~l~--~~Dlivla 211 (321)
-++.+.++.. ++|+++.|
T Consensus 93 G~~~l~~~a~~~~~D~Vv~A 112 (398)
T 2y1e_A 93 GSDAATRLVEQTEADVVLNA 112 (398)
T ss_dssp STTHHHHHHHHSCCSEEEEC
T ss_pred cHHHHHHHhcCCCCCEEEEe
Confidence 1234555554 58998765
No 191
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=32.10 E-value=2.1e+02 Score=25.45 Aligned_cols=51 Identities=10% Similarity=0.033 Sum_probs=31.8
Q ss_pred eeEEEEEeCC-chh--HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 129 YKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 129 ~rIavl~S~~-g~~--l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
+||+++..+. ||. +..|...+++. .++|..+ +.. ...+..++.|+++..++
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~-~~~------~~~~~~~~~G~~~~~~~ 58 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARR--GHRITYV-TTP------LFADEVKAAGAEVVLYK 58 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEE-ECH------HHHHHHHHTTCEEEECC
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhC--CCEEEEE-cCH------HHHHHHHHcCCEEEecc
Confidence 4998887664 432 34455554432 3788754 432 35677788999998776
No 192
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=31.91 E-value=1e+02 Score=30.69 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=31.5
Q ss_pred ccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeee
Q 020794 41 THGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVF 76 (321)
Q Consensus 41 ~~~Iltv~G---~Dr~GIVA~VS~~La~~G~NI~d~~q~ 76 (321)
.-..|++.| ++++|+.++|=+.|+++|+||.-+.+.
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ss 378 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS 378 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeC
Confidence 335788887 789999999999999999999999775
No 193
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=31.79 E-value=1.3e+02 Score=28.10 Aligned_cols=72 Identities=10% Similarity=0.129 Sum_probs=36.9
Q ss_pred EEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCCEEEE
Q 020794 132 AVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVL 210 (321)
Q Consensus 132 avl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dlivl 210 (321)
.||.-+. ++.+..|..+.+.|+ ..+|. |.-.++...+..+.....+.|||+.+++. + .+..+++++|.+++
T Consensus 124 ~ILTh~~S~tv~~~l~~A~~~gk-~~~V~-v~EsrP~~qG~~la~~L~~~gI~vtli~D--s----a~~~~m~~vd~Viv 195 (315)
T 3ecs_A 124 TILTHAYSRVVLRVLEAAVAAKK-RFSVY-VTESQPDLSGKKMAKALCHLNVPVTVVLD--A----AVGYIMEKADLVIV 195 (315)
T ss_dssp EEEECSCCHHHHHHHHHHHTTTC-CEEEE-EECCTTTTHHHHHHHHHHTTTCCEEEECG--G----GHHHHGGGCSEEEE
T ss_pred EEEEcCCcHHHHHHHHHHHHcCC-eEEEE-EecCCCcchHHHHHHHHHHcCCCEEEEeh--h----HHHHHHHhCCEEEE
Confidence 3444344 344554555555554 34443 22223322223344445678999998863 1 23344457887766
Q ss_pred E
Q 020794 211 A 211 (321)
Q Consensus 211 a 211 (321)
.
T Consensus 196 G 196 (315)
T 3ecs_A 196 G 196 (315)
T ss_dssp E
T ss_pred C
Confidence 4
No 194
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=31.65 E-value=1.1e+02 Score=29.65 Aligned_cols=75 Identities=11% Similarity=0.147 Sum_probs=41.9
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCC---------------
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK--------------- 190 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~--------------- 190 (321)
++.||+|++.|. |.....++... | ++|. +.+.. ...++.+++.|.++..++..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--G---a~V~--v~D~~----~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--G---AVVS--ATDVR----PAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--T---CEEE--EECSS----TTHHHHHHHTTCEECCCCC----------------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--C---CEEE--EEcCC----HHHHHHHHHcCCceeecccccccccccccchhhhc
Confidence 457999998875 45555555542 3 5544 33432 13467778888764332100
Q ss_pred cch----hHHHHHHHhcCCCEEEEEe
Q 020794 191 ENE----REEELLELVQNTDFLVLAR 212 (321)
Q Consensus 191 ~~~----~~~~~~~~l~~~Dlivlag 212 (321)
.+. ..+.+.+.++++|+++.+-
T Consensus 258 s~~~~~~~~~~l~e~l~~aDVVI~tv 283 (405)
T 4dio_A 258 SGEYQVKQAALVAEHIAKQDIVITTA 283 (405)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred chhhhhhhHhHHHHHhcCCCEEEECC
Confidence 000 1235566667999998763
No 195
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=31.52 E-value=72 Score=25.49 Aligned_cols=58 Identities=16% Similarity=0.253 Sum_probs=32.8
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-CchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
+.+|...+.++ ++.|+ +.++.+-.|-+... -..+..+|++++||+.++.. ..++=+.+
T Consensus 29 l~~G~~~v~ka----l~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~s-----k~eLG~a~ 87 (124)
T 2fc3_A 29 IKKGTNETTKA----VERGL--AKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPS-----KKRLGEAA 87 (124)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESC-----HHHHHHHT
T ss_pred ccCCHHHHHHH----HHcCC--ceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECC-----HHHHHHHh
Confidence 44554444444 34453 55554444432211 35788999999999987763 23455555
No 196
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=31.40 E-value=33 Score=31.83 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=20.2
Q ss_pred CCeeEEEEEeCC-ch-hHHHHHHhhhcCCcCeeEEEEEeC
Q 020794 127 PKYKVAVLASKQ-EH-CLVDFLYGWQEGKLPVEITCVISN 164 (321)
Q Consensus 127 ~~~rIavl~S~~-g~-~l~~lL~~~~~~~l~~~i~~Vis~ 164 (321)
+++||+|+|.|. +. .+...|.. . -..++++|+..
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~---~-~~~~l~av~d~ 39 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQ---M-QDIRIVAACDS 39 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHT---C-TTEEEEEEECS
T ss_pred CcceEEEECCCHHHHHHHHHHHHh---C-CCcEEEEEEcC
Confidence 468999999887 33 22222222 1 13788877654
No 197
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=31.27 E-value=68 Score=25.44 Aligned_cols=50 Identities=12% Similarity=0.319 Sum_probs=29.3
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-CchHHHHHHHcCCCEEEEcC
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~ 189 (321)
+.+|...+.+++ +.|+ +.++.+-.|-+... -..+..+|++++||+.++..
T Consensus 30 l~~G~~~v~kal----~~gk--a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~s 80 (120)
T 1vq8_F 30 VKKGTNETTKSI----ERGS--AELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQ 80 (120)
T ss_dssp EEESHHHHHHHH----HHTC--CSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESC
T ss_pred EeECHHHHHHHH----HcCC--ceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECC
Confidence 445544554444 4453 55554444432211 35788999999999987763
No 198
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=31.22 E-value=1.4e+02 Score=26.43 Aligned_cols=78 Identities=12% Similarity=0.159 Sum_probs=42.6
Q ss_pred CeeEEEEEeCCc-hh--HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCc---c---------
Q 020794 128 KYKVAVLASKQE-HC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE---N--------- 192 (321)
Q Consensus 128 ~~rIavl~S~~g-~~--l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~---~--------- 192 (321)
+|||+++..+.| +. +..|...+.+. .++|..+ +.... .......+.|+++..++... .
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~v~-~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 78 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWL-GTADR----MEADLVPKHGIEIDFIRISGLRGKGIKALIAAP 78 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEE-ECTTS----THHHHGGGGTCEEEECCCCCCTTCCHHHHHTCH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHc--CCEEEEE-ecCCc----chhhhccccCCceEEecCCccCcCccHHHHHHH
Confidence 379999976654 32 23555555432 3787744 44321 12344556799987765321 0
Q ss_pred h----hHHHHHHHhc--CCCEEEEEe
Q 020794 193 E----REEELLELVQ--NTDFLVLAR 212 (321)
Q Consensus 193 ~----~~~~~~~~l~--~~Dlivlag 212 (321)
. .-..+.++++ ++|++++.+
T Consensus 79 ~~~~~~~~~l~~~l~~~~pDvv~~~~ 104 (364)
T 1f0k_A 79 LRIFNAWRQARAIMKAYKPDVVLGMG 104 (364)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEECS
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 0 0123444554 899998754
No 199
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=31.17 E-value=93 Score=25.86 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=43.8
Q ss_pred CCeeEEEEEeCCc--hh-HHHHHHhhhc-CCcC--eeEE--EEEeCC-CCCCCchHHHHHHHcCCCEEEEcCCcchhHHH
Q 020794 127 PKYKVAVLASKQE--HC-LVDFLYGWQE-GKLP--VEIT--CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (321)
Q Consensus 127 ~~~rIavl~S~~g--~~-l~~lL~~~~~-~~l~--~~i~--~Vis~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (321)
.++||.|+.+|+- |. .++++..... ..+. .+|. ++-..+ ..+++....+.++++||++ ....+ ...+ +
T Consensus 4 ~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~~ar-~l~~-~ 80 (157)
T 3n8i_A 4 ATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM-SHVAR-QITK-E 80 (157)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC-CCCCC-BCCH-H
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC-CCcee-ECCH-H
Confidence 4789999988874 43 3445554322 1222 3332 222212 1224567889999999996 22111 1122 2
Q ss_pred HHHHhcCCCEEEEEeec
Q 020794 198 LLELVQNTDFLVLARYM 214 (321)
Q Consensus 198 ~~~~l~~~Dlivlag~~ 214 (321)
.. ..+|+|+...-.
T Consensus 81 ~~---~~~DlIi~M~~~ 94 (157)
T 3n8i_A 81 DF---ATFDYILCMDES 94 (157)
T ss_dssp HH---HHCSEEEESSHH
T ss_pred Hc---CCCCEEEEeCcH
Confidence 22 268999875443
No 200
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=30.96 E-value=34 Score=27.43 Aligned_cols=76 Identities=12% Similarity=0.065 Sum_probs=36.5
Q ss_pred CCCCCCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHH-HcCCCEEEEcCCcchhHHHHHH
Q 020794 123 PDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-RHGIPYHYLCAKENEREEELLE 200 (321)
Q Consensus 123 ~~~~~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~-~~gIP~~~~~~~~~~~~~~~~~ 200 (321)
+...+.++|+|+|.|. |..+...|.. .| ++|.++-.+.. -.+.++ +.|+.+...+. . ..+.+.+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~--~g---~~V~vid~~~~------~~~~~~~~~g~~~~~~d~-~--~~~~l~~ 79 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASS--SG---HSVVVVDKNEY------AFHRLNSEFSGFTVVGDA-A--EFETLKE 79 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHH--TT---CEEEEEESCGG------GGGGSCTTCCSEEEESCT-T--SHHHHHT
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCHH------HHHHHHhcCCCcEEEecC-C--CHHHHHH
Confidence 3445678999998765 4444444432 23 46664432221 122333 55666543221 1 1222333
Q ss_pred H-hcCCCEEEEEe
Q 020794 201 L-VQNTDFLVLAR 212 (321)
Q Consensus 201 ~-l~~~Dlivlag 212 (321)
. +.++|+++.+-
T Consensus 80 ~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 80 CGMEKADMVFAFT 92 (155)
T ss_dssp TTGGGCSEEEECS
T ss_pred cCcccCCEEEEEe
Confidence 2 34789988763
No 201
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=30.84 E-value=2.5e+02 Score=25.80 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=32.0
Q ss_pred eeEEEEEeCC-ch--hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 129 YKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 129 ~rIavl~S~~-g~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
|||++++.+. |+ .+..|....++. .++|.. ++.. ...+..++.|+++..++
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~--Gh~V~v-~~~~------~~~~~v~~~g~~~~~l~ 54 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL--GADARM-CLPP------DYVERCAEVGVPMVPVG 54 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT--TCCEEE-EECG------GGHHHHHHTTCCEEECS
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC--CCeEEE-EeCH------HHHHHHHHcCCceeecC
Confidence 6899887666 33 244455554432 267774 4432 25678888999998876
No 202
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=30.69 E-value=76 Score=26.93 Aligned_cols=75 Identities=8% Similarity=0.096 Sum_probs=42.0
Q ss_pred CCCCeeEEEEEeCCchhHHHHHHhhhc-CCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc-CCcchh--HHHHHH
Q 020794 125 IDPKYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENER--EEELLE 200 (321)
Q Consensus 125 ~~~~~rIavl~S~~g~~l~~lL~~~~~-~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~-~~~~~~--~~~~~~ 200 (321)
..++.|++|+.+|..-. +.++ . |+ + .+. ....+.+++++.|+.+.... -+++.. .+.+.+
T Consensus 12 ~~~~~rv~IittGde~~-~~~~----~~G~----i----~Ds---n~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~ 75 (178)
T 2pjk_A 12 APKSLNFYVITISTSRY-EKLL----KKEP----I----VDE---SGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTD 75 (178)
T ss_dssp -CCCCEEEEEEECHHHH-HHHH----TTCC----C----CCH---HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEEEeCcccc-cccc----cCCe----E----eeh---HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHH
Confidence 44678999999986433 2222 2 32 1 111 12356788889998765433 122211 133444
Q ss_pred HhcC--CCEEEEEeecc
Q 020794 201 LVQN--TDFLVLARYMQ 215 (321)
Q Consensus 201 ~l~~--~Dlivlag~~~ 215 (321)
.+.+ +|+|++.|=.-
T Consensus 76 a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 76 ALSIDEVDVIISTGGTG 92 (178)
T ss_dssp HHTCTTCCEEEEESCCS
T ss_pred HHhcCCCCEEEECCCCC
Confidence 4544 89999988654
No 203
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.56 E-value=43 Score=25.66 Aligned_cols=48 Identities=10% Similarity=0.144 Sum_probs=26.7
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEE
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~ 187 (321)
+++|....++++ +.|+ +..+.+-.|-+...-..+..+|++++||++.+
T Consensus 16 ~v~G~~~v~kai----~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 16 VVLGSNETIRLA----KTGG--AKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp EEESHHHHHHHH----HHTC--CSEEEEECCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EeECHHHHHHHH----HcCC--ccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 445544555544 4453 45554443321101245678899999998766
No 204
>3luc_A Protein argonaute-2; MID domain, ribonucleoprotein, RNA-binding, RNA-mediated GEN silencing, translation regulation, RNA binding protein; 1.69A {Homo sapiens} PDB: 3lud_A* 3lug_A 3luh_A 3luj_A* 3luk_A 3qx8_A* 3qx9_A*
Probab=30.43 E-value=1.6e+02 Score=23.63 Aligned_cols=81 Identities=10% Similarity=0.041 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHH
Q 020794 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (321)
Q Consensus 99 ~~~L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~ 178 (321)
.+.+.+.|...+..+||.. . .++ .+.. .+.....++..++.+++..-..+++.+|..........+.++|.
T Consensus 30 ~~~F~~~L~~~~~~~Gm~i-----~--~~p-~~~~-~~~~~~~v~~~~~~l~~~~~~~qlv~~ilp~~~~~Y~~iK~~~~ 100 (138)
T 3luc_A 30 LKSFTEQLRKISRDAGMPI-----Q--GQP-CFCK-YAQGADSVEPMFRHLKNTYAGLQLVVVILPGKTPVYAEVKRVGD 100 (138)
T ss_dssp HHHHHHHHHHHHHHHTCCB-----C--SSC-SEEE-ECCSGGGHHHHHHHHHHHCTTCCEEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCC-----C--CCC-eeee-cCCcHHHHHHHHHHHHhcCCCCcEEEEEECCCChHHHHHHHHhc
Confidence 5677788888888898632 1 112 2222 23333456666665544211246666666532111234566664
Q ss_pred -HcCCCEEEEc
Q 020794 179 -RHGIPYHYLC 188 (321)
Q Consensus 179 -~~gIP~~~~~ 188 (321)
+.|||...+-
T Consensus 101 ~~~gv~tqcv~ 111 (138)
T 3luc_A 101 TVLGMATQCVQ 111 (138)
T ss_dssp TTSCCCEEEEE
T ss_pred cCCCcceEEeC
Confidence 7899998774
No 205
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=30.42 E-value=2.2e+02 Score=23.81 Aligned_cols=73 Identities=8% Similarity=0.104 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCch-hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHH
Q 020794 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (321)
Q Consensus 99 ~~~L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~-~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a 177 (321)
..++.+.+++.+++.|. ++.++.+.... ....+++.+..... .++|............+.+
T Consensus 17 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~v----dgiIi~~~~~~~~~~~~~~ 78 (272)
T 3o74_A 17 YARIAKQLEQGARARGY--------------QLLIASSDDQPDSERQLQQLFRARRC----DALFVASCLPPEDDSYREL 78 (272)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEECTTCHHHHHHHHHHHHHTTC----SEEEECCCCCSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCCHHHHHHHHHHHHHcCC----CEEEEecCccccHHHHHHH
Confidence 57777778877777653 44445554432 22334444433332 2233222221235677888
Q ss_pred HHcCCCEEEEcC
Q 020794 178 ERHGIPYHYLCA 189 (321)
Q Consensus 178 ~~~gIP~~~~~~ 189 (321)
.+.|||+..++.
T Consensus 79 ~~~~iPvV~~~~ 90 (272)
T 3o74_A 79 QDKGLPVIAIDR 90 (272)
T ss_dssp HHTTCCEEEESS
T ss_pred HHcCCCEEEEcc
Confidence 999999998874
No 206
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=30.39 E-value=1.1e+02 Score=23.39 Aligned_cols=57 Identities=9% Similarity=-0.101 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhh-cCCcCeeEEEEE
Q 020794 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVI 162 (321)
Q Consensus 102 L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~-~~~l~~~i~~Vi 162 (321)
++--...+|.++|+.-|-.+..+ . +|-+.+.|....+.++++.++ ++...+.|.-|-
T Consensus 23 FR~~v~~~A~~lgL~G~V~N~~d--G--~Vei~~eG~~~~v~~f~~~l~~~~p~~a~V~~v~ 80 (99)
T 2vh7_A 23 FRKHTQAEGKKLGLVGWVQNTDR--G--TVQGQLQGPISKVRHMQEWLETRGSPKSHIDKAN 80 (99)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHHHHTCSTTCEEEEEE
T ss_pred hHHHHHHHHHHcCCcEEEEECCC--C--CEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEE
Confidence 45666778899998776433332 2 677788887788999999887 454447776653
No 207
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=30.26 E-value=48 Score=30.19 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=20.1
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeC
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISN 164 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~ 164 (321)
+++||+|+|.|. |..+ +..+++. ...++++|+..
T Consensus 8 ~~irv~IIG~G~iG~~~---~~~l~~~-~~~elvav~d~ 42 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYA---LQALREA-PDFEIAGIVRR 42 (304)
T ss_dssp CCEEEEEECCSHHHHHH---HHHHHHC-TTEEEEEEECC
T ss_pred CCCEEEEECChHHHHHH---HHHHhcC-CCCEEEEEEcC
Confidence 468999999875 3332 3333221 14788877643
No 208
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=30.22 E-value=1.1e+02 Score=27.11 Aligned_cols=100 Identities=9% Similarity=0.056 Sum_probs=55.4
Q ss_pred CCChHHHHHHHHHHHHHhhhcccee----------eeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCC
Q 020794 96 KWPREQMDEDFFKLSKMFNAMRSVV----------RVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 165 (321)
Q Consensus 96 ~~~~~~L~~~L~~la~~lg~~~~~~----------r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~ 165 (321)
.++.++++++|.-+++ +|-..--+ +.-..+++.|+++.|.|+- =++|+..........++++++-+.
T Consensus 43 gv~~~qiRkDls~fg~-~G~~g~GY~V~~L~~~i~~~Lg~~~~~~V~IvGaG~l--G~aLa~~~~~~~~g~~iVg~~D~d 119 (212)
T 3keo_A 43 GIDSATVRRDFSYFGE-LGRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNI--GRALLHYRFHDRNKMQISMAFDLD 119 (212)
T ss_dssp TSCHHHHHHHHHTTGG-GTTTSSSEEHHHHHHHHHHHTTTTSCEEEEEECCSHH--HHHHTTCCCCTTSSEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHhh-cCCCCCCEEHHHHHHHHHHHhCCCCCCEEEEECcCHH--HHHHHHhhhcccCCeEEEEEEeCC
Confidence 4567788888876653 23100000 1223566789999887652 233444322223468999999765
Q ss_pred CC-CCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc--CCCEEEEE
Q 020794 166 DR-GPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLA 211 (321)
Q Consensus 166 ~~-~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~~Dlivla 211 (321)
++ ..+. +.-+|+|+...+ ++.++++ ++|.+++|
T Consensus 120 p~~kiG~-----~~i~GvpV~~~~--------dL~~~v~~~~Id~vIIA 155 (212)
T 3keo_A 120 SNDLVGK-----TTEDGIPVYGIS--------TINDHLIDSDIETAILT 155 (212)
T ss_dssp TSTTTTC-----BCTTCCBEEEGG--------GHHHHC-CCSCCEEEEC
T ss_pred chhccCc-----eeECCeEEeCHH--------HHHHHHHHcCCCEEEEe
Confidence 43 1111 012689988532 3556665 68998886
No 209
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=29.64 E-value=68 Score=26.02 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=29.3
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCC--chHHHHHHHcCCCEEEEcC
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~--~~v~~~a~~~gIP~~~~~~ 189 (321)
+.+|....+++| +.|+ +..+.+-.|-+ +++ ..+..+|++++||+.+++.
T Consensus 25 l~~G~~~v~Kai----~~gk--a~LViiA~D~~-p~~~~~~i~~lc~~~~Ip~~~v~s 75 (126)
T 2xzm_U 25 ISKGLHEVLRTI----EAKQ--ALFVCVAEDCD-QGNYVKLVKALCAKNEIKYVSVPK 75 (126)
T ss_dssp EEESHHHHHHHH----HHTC--CSEEEEESSCC-STTHHHHHHHHHHHTTCCEEEESC
T ss_pred EeecHHHHHHHH----HcCC--ceEEEEeCCCC-hHHHHHHHHHHHHHhCCCEEEECC
Confidence 344544555544 3443 55554444332 122 3678999999999998874
No 210
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=29.44 E-value=93 Score=27.18 Aligned_cols=69 Identities=13% Similarity=0.127 Sum_probs=40.3
Q ss_pred HHHHHHHcCCC-EE-EEcCCcchhHHHHHHHhc--CCCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCC
Q 020794 173 VIRFLERHGIP-YH-YLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILS 248 (321)
Q Consensus 173 v~~~a~~~gIP-~~-~~~~~~~~~~~~~~~~l~--~~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 248 (321)
+.++++++|++ +. .+. .+ ...+++.+..+ ++|++|+..+.+- + +.-.+-+=..
T Consensus 204 l~~~~~~~g~~~~~~~v~-~g-~~~~~I~~~a~~~~~dLiVmG~~g~~---------~------------~~~~~~Gsv~ 260 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIE-EG-PADVLIPRTAQKLDAVVTVIGTVART---------G------------LSGALIGNTA 260 (290)
T ss_dssp HHHHHHHHTCCTTTEEEE-ES-CHHHHHHHHHHHHTCSEEEEECCSSC---------C------------GGGCCSCHHH
T ss_pred HHHHHHHcCCCcceEEEe-cc-CHHHHHHHHHHhcCCCEEEECCCCCc---------C------------CcceecchHH
Confidence 34577788885 21 221 12 23456777765 7999999988761 0 0011112234
Q ss_pred hhHHhhcCCCeEEecC
Q 020794 249 GKFLRSYGKDVINIHH 264 (321)
Q Consensus 249 ~~~l~~~~~~~INiHp 264 (321)
.++++..+.+++=++|
T Consensus 261 ~~vl~~~~~pVLvv~~ 276 (290)
T 3mt0_A 261 EVVLDTLESDVLVLKP 276 (290)
T ss_dssp HHHHTTCSSEEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 5677777777777775
No 211
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=29.23 E-value=2.2e+02 Score=26.03 Aligned_cols=122 Identities=12% Similarity=0.057 Sum_probs=72.6
Q ss_pred EEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCC--CC--eEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhccc
Q 020794 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEK--KN--VFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (321)
Q Consensus 43 ~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l--~g--~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~ 118 (321)
-+..|+|+-..+....++..+...++=.+....+...+ .+ .++.|+. .+....-..+.++.+++|
T Consensus 85 ~v~aviG~~~S~~~~a~~~~~~~~~ip~is~~~~~~~l~~~~~~~~~fr~~-------~~~~~~~~~~~~~~~~~g---- 153 (433)
T 4f11_A 85 NHLMVFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTV-------PSDNAVNPAILKLLKHYQ---- 153 (433)
T ss_dssp CCSEEEECCSHHHHHHHHHTHHHHTCEEEESSCCCGGGGCTTTCTTEEESS-------CCGGGHHHHHHHHHHHTT----
T ss_pred ceEEEECCCcchHHHHHHHHHHhcCceEEEcccCCccccccccCCceEEec-------CchHHHHHHHHHHHHHcC----
Confidence 35678899999999999999999988777643332111 11 2332331 134555666776666553
Q ss_pred eeeeCCCCCCeeEEEEEeCCc--hh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 119 VVRVPDIDPKYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 119 ~~r~~~~~~~~rIavl~S~~g--~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
-+||+++.+... .. ++.+.+.+++. ..+|+....-.. .....+...++.+.-+.++.
T Consensus 154 ---------~~~v~ii~~~~~~g~~~~~~~~~~~~~~--g~~v~~~~~~~~--d~~~~l~~i~~~~~~vii~~ 213 (433)
T 4f11_A 154 ---------WKRVGTLTQDVQRFSEVRNDLTGVLYGE--DIEISDTESFSN--DPCTSVKKLKGNDVRIILGQ 213 (433)
T ss_dssp ---------CCEEEEEEESSHHHHHHHHHHHHHSSSS--SCEEEEEEEESS--CCHHHHHHHHHTTCCEEEEE
T ss_pred ---------CcEEEEEEecchhhHHHHHHHHHHHHHc--CceEEEEeccCc--CHHHHHHHHhhCCCeEEEEe
Confidence 248999998763 22 34444444332 356665443322 13456667777887777665
No 212
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=29.14 E-value=68 Score=25.75 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=29.1
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-CchHHHHHHHcCCCEEEEcC
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-~~~v~~~a~~~gIP~~~~~~ 189 (321)
+++|.....++ ++.|+ +..+.+-.|-+... -..+..+|+++|||+.++..
T Consensus 32 lv~G~~~v~ka----i~~gk--a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s 82 (122)
T 3o85_A 32 IKRGANEALKQ----VNRGK--AELVIIAADADPIEIVLHLPLACEDKGVPYVFIGS 82 (122)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESC
T ss_pred EeEcHHHHHHH----HHcCC--ceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECC
Confidence 44554444444 34453 55554444332111 25678899999999988763
No 213
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=28.87 E-value=32 Score=26.54 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=27.5
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
+++|...++++ ++.|+ +..+.+-.|-+...-..+..+|++++||++.+.
T Consensus 19 ~v~G~~~v~ka----i~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~ 67 (101)
T 3on1_A 19 LLTGEEQVVKA----VQNGQ--VTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVG 67 (101)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EeECHHHHHHH----HHcCC--CcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 44554444444 34454 455544333321112356778999999999875
No 214
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=28.07 E-value=39 Score=26.13 Aligned_cols=49 Identities=8% Similarity=0.199 Sum_probs=27.9
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
+++|...++++ ++.|+ +..+.+-.+-+...-..+..+|+.++||++.+.
T Consensus 20 ~v~G~~~v~ka----i~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~ 68 (101)
T 3v7q_A 20 VVSGEDLVIKE----IRNAR--AKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVE 68 (101)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEEETTSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred cccchhhhHHH----HhcCc--eeEEEEeccccccchhhhcccccccCCCeeeec
Confidence 44554454444 34554 555544333221112356778999999999875
No 215
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=28.06 E-value=1.8e+02 Score=25.01 Aligned_cols=72 Identities=8% Similarity=0.092 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHH
Q 020794 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (321)
Q Consensus 99 ~~~L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~ 178 (321)
+.++.+.+++.+++.|. ++.++.+........+++.+.... +.+||...... .....+.+.
T Consensus 25 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~l~~~~----vdGiIi~~~~~-~~~~~~~l~ 85 (294)
T 3qk7_A 25 FLEMISWIGIELGKRGL--------------DLLLIPDEPGEKYQSLIHLVETRR----VDALIVAHTQP-EDFRLQYLQ 85 (294)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEEECTTCCCHHHHHHHHHTC----CSEEEECSCCS-SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCChhhHHHHHHHHHcCC----CCEEEEeCCCC-ChHHHHHHH
Confidence 56777778777776653 444454543222223333333332 23333332221 236778889
Q ss_pred HcCCCEEEEcC
Q 020794 179 RHGIPYHYLCA 189 (321)
Q Consensus 179 ~~gIP~~~~~~ 189 (321)
+.|||+..++.
T Consensus 86 ~~~iPvV~~~~ 96 (294)
T 3qk7_A 86 KQNFPFLALGR 96 (294)
T ss_dssp HTTCCEEEESC
T ss_pred hCCCCEEEECC
Confidence 99999998874
No 216
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=27.84 E-value=3.1e+02 Score=24.05 Aligned_cols=82 Identities=13% Similarity=0.183 Sum_probs=40.4
Q ss_pred CCeeEEEEEeCCch--hHHHHHHhhhcCCcC-eeEEEEEeCCCCCCCchHHHHHHHcCCCE-EEEcC--C-cch-h----
Q 020794 127 PKYKVAVLASKQEH--CLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCA--K-ENE-R---- 194 (321)
Q Consensus 127 ~~~rIavl~S~~g~--~l~~lL~~~~~~~l~-~~i~~Vis~~~~~~~~~v~~~a~~~gIP~-~~~~~--~-~~~-~---- 194 (321)
++|||++++...+. ....++..+++. -. +++..+++... .....+..+..+++. ..+.. . ... .
T Consensus 7 ~~mkIl~v~~~~~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (375)
T 3beo_A 7 ERLKVMTIFGTRPEAIKMAPLVLELQKH-PEKIESIVTVTAQH---RQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTR 82 (375)
T ss_dssp SCEEEEEEECSHHHHHHHHHHHHHHTTC-TTTEEEEEEECCSS---SHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHH
T ss_pred cCceEEEEecCcHHHHHHHHHHHHHHhC-CCCCCeEEEEcCCC---HHHHHHHHHHcCCCCccccccCCCcccHHHHHHH
Confidence 46899988744322 234555555443 12 56665655432 112233445567764 22221 1 110 0
Q ss_pred -HHHHHHHhc--CCCEEEEEe
Q 020794 195 -EEELLELVQ--NTDFLVLAR 212 (321)
Q Consensus 195 -~~~~~~~l~--~~Dlivlag 212 (321)
-..+.++++ ++|++++.+
T Consensus 83 ~~~~l~~~l~~~~pDvv~~~~ 103 (375)
T 3beo_A 83 GLEGLDKVMKEAKPDIVLVHG 103 (375)
T ss_dssp HHHHHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHHHHHhCCCEEEEeC
Confidence 123445554 899998743
No 217
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=27.74 E-value=30 Score=30.13 Aligned_cols=68 Identities=13% Similarity=0.273 Sum_probs=35.6
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcC-eeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~-~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~ 205 (321)
++||+|++.|. |..+..-|.. .|..+ .+|. + .+++ .....+++++.|+.+. . ..++ .++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~--~g~~~~~~V~-~-~~r~---~~~~~~~~~~~g~~~~--~-----~~~e---~~~~a 64 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMIN--KNIVSSNQII-C-SDLN---TANLKNASEKYGLTTT--T-----DNNE---VAKNA 64 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTSSCGGGEE-E-ECSC---HHHHHHHHHHHCCEEC--S-----CHHH---HHHHC
T ss_pred CCeEEEECccHHHHHHHHHHHh--CCCCCCCeEE-E-EeCC---HHHHHHHHHHhCCEEe--C-----ChHH---HHHhC
Confidence 36899999876 4444333322 23222 2444 3 3442 2345556666787532 1 1122 23368
Q ss_pred CEEEEEe
Q 020794 206 DFLVLAR 212 (321)
Q Consensus 206 Dlivlag 212 (321)
|+++++-
T Consensus 65 DvVilav 71 (247)
T 3gt0_A 65 DILILSI 71 (247)
T ss_dssp SEEEECS
T ss_pred CEEEEEe
Confidence 9999875
No 218
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=27.68 E-value=3.1e+02 Score=24.33 Aligned_cols=106 Identities=13% Similarity=0.180 Sum_probs=54.5
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCC
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~ 205 (321)
+.++|+|+|.|. |..+...+.. .| ++|. +.++. ..-.+.+++.|+.+. +. +++.+++.++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~--~G---~~V~--~~dr~----~~~~~~~~~~g~~~~--~~------~~l~~~l~~a 214 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAA--LG---AKVK--VGARE----SDLLARIAEMGMEPF--HI------SKAAQELRDV 214 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EEESS----HHHHHHHHHTTSEEE--EG------GGHHHHTTTC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CC---CEEE--EEECC----HHHHHHHHHCCCeec--Ch------hhHHHHhcCC
Confidence 457899998765 3444333332 23 4543 33332 112334456676432 11 1244556689
Q ss_pred CEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCChHHHHHHHhCC
Q 020794 206 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGV 284 (321)
Q Consensus 206 Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~pi~~Ai~~G~ 284 (321)
|+++++--.+ ++..+.++..+.+.+=+.-+--|. +.. +.++...|.
T Consensus 215 DvVi~~~p~~------------------------------~i~~~~l~~mk~~~~lin~ar~~~--~~~-~~~a~~~Gv 260 (293)
T 3d4o_A 215 DVCINTIPAL------------------------------VVTANVLAEMPSHTFVIDLASKPG--GTD-FRYAEKRGI 260 (293)
T ss_dssp SEEEECCSSC------------------------------CBCHHHHHHSCTTCEEEECSSTTC--SBC-HHHHHHHTC
T ss_pred CEEEECCChH------------------------------HhCHHHHHhcCCCCEEEEecCCCC--CCC-HHHHHHCCC
Confidence 9998864222 677777777665443333343332 223 356655653
No 219
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=27.55 E-value=79 Score=28.40 Aligned_cols=47 Identities=9% Similarity=0.138 Sum_probs=27.1
Q ss_pred eeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCC
Q 020794 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (321)
Q Consensus 129 ~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP 183 (321)
+||+|+|.|. |..+ ++..+.+. ..++++|+... .....++++++|+|
T Consensus 1 ~~vgiiG~G~~g~~~--~~~~l~~~--~~~~vav~d~~----~~~~~~~~~~~g~~ 48 (332)
T 2glx_A 1 NRWGLIGASTIAREW--VIGAIRAT--GGEVVSMMSTS----AERGAAYATENGIG 48 (332)
T ss_dssp CEEEEESCCHHHHHT--HHHHHHHT--TCEEEEEECSC----HHHHHHHHHHTTCS
T ss_pred CeEEEEcccHHHHHh--hhHHhhcC--CCeEEEEECCC----HHHHHHHHHHcCCC
Confidence 4899999875 2222 02222222 36888776543 22456778888886
No 220
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=27.54 E-value=1.9e+02 Score=25.35 Aligned_cols=58 Identities=14% Similarity=0.034 Sum_probs=36.4
Q ss_pred CeeEEEEEeCCc-hh-HHHHHHhhhcCCcCeeEEEEEeCCCCC-CCchHHHHHHHcCCCEEEEc
Q 020794 128 KYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 128 ~~rIavl~S~~g-~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~-~~~~v~~~a~~~gIP~~~~~ 188 (321)
..|+++..||.- |. +..++... -| +.++.+|..++... ....+.+.|++.|||++.++
T Consensus 22 ~~~vvv~lSGGiDSs~~~~l~~~~-~g--~~~v~av~~~~~~~~~~~~a~~~a~~lgi~~~~i~ 82 (257)
T 2e18_A 22 NNGVVIGISGGVDSATVAYLATKA-LG--KEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVIN 82 (257)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHH-HC--GGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEECC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHh-cC--CCcEEEEEeCCCCchHHHHHHHHHHHhCCCEEEEE
Confidence 358999999973 43 33444332 12 24677777665321 11356788999999998876
No 221
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=27.23 E-value=1.1e+02 Score=27.86 Aligned_cols=34 Identities=9% Similarity=-0.059 Sum_probs=19.8
Q ss_pred CCeeEEEEEeC-C-chhHHHHHHhhhcCCcCeeEEEEEeCC
Q 020794 127 PKYKVAVLASK-Q-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (321)
Q Consensus 127 ~~~rIavl~S~-~-g~~l~~lL~~~~~~~l~~~i~~Vis~~ 165 (321)
+++||+|++.| . +.. .+..++.. +.++++|+...
T Consensus 2 ~mirvgiIG~gG~i~~~---h~~~l~~~--~~~lvav~d~~ 37 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPR---HLKAIKEV--GGVLVASLDPA 37 (312)
T ss_dssp -CCEEEEECTTSSSHHH---HHHHHHHT--TCEEEEEECSS
T ss_pred CceEEEEECCChHHHHH---HHHHHHhC--CCEEEEEEcCC
Confidence 46899999984 3 332 22222222 46888887544
No 222
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=26.99 E-value=2.2e+02 Score=21.95 Aligned_cols=80 Identities=14% Similarity=0.230 Sum_probs=44.9
Q ss_pred eeEEEEEeCCc-hhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCCE
Q 020794 129 YKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (321)
Q Consensus 129 ~rIavl~S~~g-~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dl 207 (321)
.+|++++.-.. .++..+++.++.=.-..++.+++..... ....+.+.++++++.+.. .. ...+++.+++.++|+
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~~~~~~~~~~~~v~~-g~---~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP-DEKKIKLLAQKLGVKAEF-GF---VNSNELLEILKTCTL 77 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST-THHHHHHHHHHHTCEEEC-CC---CCHHHHHHHHTTCSE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc-cHHHHHHHHHHcCCeEEE-ee---cCHHHHHHHHHhCCE
Confidence 34555443322 3456666665431111345555544311 234678888999985554 32 224678888889999
Q ss_pred EEEEee
Q 020794 208 LVLARY 213 (321)
Q Consensus 208 ivlag~ 213 (321)
+|+...
T Consensus 78 ~v~ps~ 83 (166)
T 3qhp_A 78 YVHAAN 83 (166)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 987554
No 223
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=26.92 E-value=73 Score=27.11 Aligned_cols=55 Identities=4% Similarity=-0.014 Sum_probs=35.0
Q ss_pred eeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCCC---CchHHHHHHHcCCCEEEEc
Q 020794 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 129 ~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~---~~~v~~~a~~~gIP~~~~~ 188 (321)
.||+|-.||+- ..|-.++.... .++.+|..++.-.. ...+.++|+++|||++.+.
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~~-----~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~ 104 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQIR-----PDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYR 104 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHHS-----TTCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHhC-----CCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 37888888863 34555555432 24555666653211 2367888999999999875
No 224
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=26.88 E-value=1.6e+02 Score=26.07 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=44.1
Q ss_pred CCeeEEEEEeC-----Cc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcc----hhH
Q 020794 127 PKYKVAVLASK-----QE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN----ERE 195 (321)
Q Consensus 127 ~~~rIavl~S~-----~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~----~~~ 195 (321)
++|||+++... .| ..+..+...+ . .++|..+..+.. ......+....++++..++.... ...
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~---g~~v~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-D---PESIVVFASTQN---AEEAHAYDKTLDYEVIRWPRSVMLPTPTTA 75 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS-C---GGGEEEEEECSS---HHHHHHHHTTCSSEEEEESSSSCCSCHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh-c---CCeEEEEECCCC---ccchhhhccccceEEEEccccccccchhhH
Confidence 57899998862 22 2345555554 2 367775555442 11124555677888887764221 112
Q ss_pred HHHHHHhc--CCCEEEEE
Q 020794 196 EELLELVQ--NTDFLVLA 211 (321)
Q Consensus 196 ~~~~~~l~--~~Dlivla 211 (321)
..+.++++ ++|++++.
T Consensus 76 ~~l~~~~~~~~~Dvv~~~ 93 (394)
T 3okp_A 76 HAMAEIIREREIDNVWFG 93 (394)
T ss_dssp HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 35566665 79999753
No 225
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=26.78 E-value=2.4e+02 Score=25.03 Aligned_cols=78 Identities=6% Similarity=0.027 Sum_probs=46.2
Q ss_pred ChHHHHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCc-hh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCC---ch
Q 020794 98 PREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPN---SH 172 (321)
Q Consensus 98 ~~~~L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g-~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~---~~ 172 (321)
+.+++.+++...-+++ +. .....|++|..||.- |. +..++... -| .++.+|..++...+. ..
T Consensus 5 ~~~~~~~~l~~~l~d~-v~--------~~g~~~vvv~lSGGiDSsv~a~l~~~~-~g---~~v~av~~~~~~~~~~~~~~ 71 (249)
T 3p52_A 5 DWQKITEKMCDFIQEK-VK--------NSQSQGVVLGLSGGIDSALVATLCKRA-LK---ENVFALLMPTQISNKANLED 71 (249)
T ss_dssp CHHHHHHHHHHHHHHH-HH--------TSSCSEEEEECCSSHHHHHHHHHHHHH-HT---TSEEEEECCSCCSSCHHHHH
T ss_pred CHHHHHHHHHHHHHHH-HH--------HhCCCCEEEEcCCCHHHHHHHHHHHHH-cC---CcEEEEEecCCCCCHHHHHH
Confidence 4555666665544443 11 113468999999973 43 44444432 13 467777766532111 35
Q ss_pred HHHHHHHcCCCEEEEc
Q 020794 173 VIRFLERHGIPYHYLC 188 (321)
Q Consensus 173 v~~~a~~~gIP~~~~~ 188 (321)
+.++|++.|||++.++
T Consensus 72 a~~~a~~lgi~~~~v~ 87 (249)
T 3p52_A 72 ALRLCADLNLEYKIIE 87 (249)
T ss_dssp HHHHHHHHTCEEEECC
T ss_pred HHHHHHHhCCCEEEEE
Confidence 6789999999998876
No 226
>3i1m_F 30S ribosomal protein S6; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1p6g_F 1p87_F* 1vs7_F* 2avy_F 2aw7_F 1vs5_F 2i2u_F 2i2p_F* 2qan_F* 2qb9_F* 2qbb_F* 2qbd_F 2qbf_F 2qbh_F* 2qbj_F* 2qou_F* 2qow_F* 2qoy_F* 2qp0_F* 2vho_F ...
Probab=26.77 E-value=71 Score=26.40 Aligned_cols=54 Identities=11% Similarity=0.178 Sum_probs=35.4
Q ss_pred CCccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEeCCCCCChHHHHHHH
Q 020794 50 PDEVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIFDPIKWPREQMDEDF 106 (321)
Q Consensus 50 ~Dr~GIVA~VS~~La~~G~NI~d~~q~~---------~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L 106 (321)
.....+|..+.+.|.++||.|..++--. ...+|.|+ .|.|+.+.. ..++|...|
T Consensus 16 e~v~~~ve~~~~~I~~~GG~I~~ve~wG~R~LAY~I~K~~~G~Y~-l~~f~a~~~--~i~ELer~l 78 (135)
T 3i1m_F 16 EQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV-LMNVEAPQE--VIDELETTF 78 (135)
T ss_dssp TSHHHHHHHHHHHHHHTTCEECCCEEEEEECCSSCTTSSSCEEEE-ECCEECCTT--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEeeccccCceEcCCCCeEEEE-EEEEEeCHH--HHHHHHHHh
Confidence 3456788899999999999999876543 12356665 667776542 344444433
No 227
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=26.63 E-value=46 Score=28.86 Aligned_cols=66 Identities=17% Similarity=0.322 Sum_probs=34.6
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (321)
++||+|++.|. |..+...|.. .| .+|. +.+++ .....++++++|+.+. . ..++ .++++|
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~--~g---~~v~--~~~~~---~~~~~~~~~~~g~~~~--~-----~~~~---~~~~~D 62 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQ--TP---HELI--ISGSS---LERSKEIAEQLALPYA--M-----SHQD---LIDQVD 62 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT--SS---CEEE--EECSS---HHHHHHHHHHHTCCBC--S-----SHHH---HHHTCS
T ss_pred ccEEEEECCCHHHHHHHHHHHh--CC---CeEE--EECCC---HHHHHHHHHHcCCEee--C-----CHHH---HHhcCC
Confidence 47999999775 4443332221 23 3443 33442 2244556666687532 1 1122 334899
Q ss_pred EEEEEee
Q 020794 207 FLVLARY 213 (321)
Q Consensus 207 livlag~ 213 (321)
+++++--
T Consensus 63 ~Vi~~v~ 69 (259)
T 2ahr_A 63 LVILGIK 69 (259)
T ss_dssp EEEECSC
T ss_pred EEEEEeC
Confidence 9988743
No 228
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=26.30 E-value=36 Score=29.72 Aligned_cols=66 Identities=14% Similarity=0.255 Sum_probs=34.7
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (321)
++||+|+|.|. |..+...|.. .| ++++.++ +++ .....+++++.|+.+. .. +.+.++++|
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~--~g---~~~v~~~-~~~---~~~~~~~~~~~g~~~~--~~--------~~~~~~~~D 70 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR--KG---FRIVQVY-SRT---EESARELAQKVEAEYT--TD--------LAEVNPYAK 70 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH--HT---CCEEEEE-CSS---HHHHHHHHHHTTCEEE--SC--------GGGSCSCCS
T ss_pred CCeEEEEcCCHHHHHHHHHHHH--CC---CeEEEEE-eCC---HHHHHHHHHHcCCcee--CC--------HHHHhcCCC
Confidence 57999999876 4444433332 23 4544343 432 2344556666677542 11 111233688
Q ss_pred EEEEEe
Q 020794 207 FLVLAR 212 (321)
Q Consensus 207 livlag 212 (321)
+++++-
T Consensus 71 vvi~av 76 (266)
T 3d1l_A 71 LYIVSL 76 (266)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 888763
No 229
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=26.15 E-value=39 Score=30.48 Aligned_cols=38 Identities=8% Similarity=0.121 Sum_probs=21.3
Q ss_pred CCCCCCeeEEEEEeCC-chh-HHHHHHhhhcCCcCeeEEEEEeCC
Q 020794 123 PDIDPKYKVAVLASKQ-EHC-LVDFLYGWQEGKLPVEITCVISNH 165 (321)
Q Consensus 123 ~~~~~~~rIavl~S~~-g~~-l~~lL~~~~~~~l~~~i~~Vis~~ 165 (321)
+...+++||+|+|.|. |.. +..+.. .+ ..++++|+...
T Consensus 5 p~~~~~~~igiIG~G~~g~~~~~~l~~---~~--~~~~v~v~d~~ 44 (315)
T 3c1a_A 5 PANNSPVRLALIGAGRWGKNYIRTIAG---LP--GAALVRLASSN 44 (315)
T ss_dssp ----CCEEEEEEECTTTTTTHHHHHHH---CT--TEEEEEEEESC
T ss_pred CCCCCcceEEEECCcHHHHHHHHHHHh---CC--CcEEEEEEeCC
Confidence 3445679999999987 433 333322 12 36788776643
No 230
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=26.10 E-value=1.6e+02 Score=28.96 Aligned_cols=56 Identities=21% Similarity=0.115 Sum_probs=38.6
Q ss_pred eeEEEEEeCCc-h-hHHHHHHhhhcCCcCeeEEEEEeCCCCC-C--CchHHHHHHHcCCCEEEEcC
Q 020794 129 YKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRG-P--NSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 129 ~rIavl~S~~g-~-~l~~lL~~~~~~~l~~~i~~Vis~~~~~-~--~~~v~~~a~~~gIP~~~~~~ 189 (321)
.||++..||.- | .+..++... | .++.+|..++.-. . ...+.++|++.|||++.++.
T Consensus 210 ~kvvvalSGGvDSsvla~ll~~~--g---~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~ 270 (503)
T 2ywb_A 210 DRVLLAVSGGVDSSTLALLLAKA--G---VDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDA 270 (503)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHH--T---CEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEEC
T ss_pred ccEEEEecCCcchHHHHHHHHHc--C---CeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEEC
Confidence 68999999973 3 444555543 4 5788887776321 1 13678889999999998873
No 231
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=25.91 E-value=54 Score=26.25 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=23.5
Q ss_pred eEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcC
Q 020794 157 EITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 157 ~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (321)
++.|+|-.....+...+++.|+++|||+...+.
T Consensus 74 ~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t~~ 106 (139)
T 2ioj_A 74 NVRCLILTGNLEPVQLVLTKAEERGVPVILTGH 106 (139)
T ss_dssp TEEEEEEETTCCCCHHHHHHHHHHTCCEEECSS
T ss_pred CCcEEEEcCCCCCCHHHHHHHHHCCCeEEEECC
Confidence 455554444344567889999999999997653
No 232
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=25.72 E-value=3.5e+02 Score=23.94 Aligned_cols=117 Identities=11% Similarity=0.098 Sum_probs=73.0
Q ss_pred EEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhccceeee
Q 020794 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRV 122 (321)
Q Consensus 43 ~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~~~r~ 122 (321)
-++-|.=.+.+-....+++.|.+.|+.+++++.... . -.+.++.+.+++.
T Consensus 14 ~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~-------------------~---a~~~I~~l~~~~p-------- 63 (217)
T 3lab_A 14 PLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTE-------------------A---GLAAISAIKKAVP-------- 63 (217)
T ss_dssp SEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTST-------------------T---HHHHHHHHHHHCT--------
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCc-------------------c---HHHHHHHHHHHCC--------
Confidence 355566667778888999999999999999966421 1 1244555555441
Q ss_pred CCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCC------CEEEEcCCcchhHH
Q 020794 123 PDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI------PYHYLCAKENEREE 196 (321)
Q Consensus 123 ~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gI------P~~~~~~~~~~~~~ 196 (321)
.. +++-|.--+.++.-.....| +++ ++|.. .+..+.++|+++|+ |+..-.. ...
T Consensus 64 -----~~---~IGAGTVlt~~~a~~ai~AG---A~f--ivsP~---~~~evi~~~~~~~v~~~~~~~~~PG~~----Tpt 123 (217)
T 3lab_A 64 -----EA---IVGAGTVCTADDFQKAIDAG---AQF--IVSPG---LTPELIEKAKQVKLDGQWQGVFLPGVA----TAS 123 (217)
T ss_dssp -----TS---EEEEECCCSHHHHHHHHHHT---CSE--EEESS---CCHHHHHHHHHHHHHCSCCCEEEEEEC----SHH
T ss_pred -----CC---eEeeccccCHHHHHHHHHcC---CCE--EEeCC---CcHHHHHHHHHcCCCccCCCeEeCCCC----CHH
Confidence 11 23444444455544445556 343 45544 35679999999999 9876332 234
Q ss_pred HHHHHhc-CCCEEE
Q 020794 197 ELLELVQ-NTDFLV 209 (321)
Q Consensus 197 ~~~~~l~-~~Dliv 209 (321)
|+.+.++ .+|++=
T Consensus 124 E~~~A~~~Gad~vK 137 (217)
T 3lab_A 124 EVMIAAQAGITQLK 137 (217)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 5666666 899883
No 233
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=25.44 E-value=53 Score=32.94 Aligned_cols=34 Identities=15% Similarity=0.286 Sum_probs=29.2
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeee
Q 020794 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVF 76 (321)
Q Consensus 41 ~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~ 76 (321)
....+.+.=|||||-.+++++.|. +.||++++..
T Consensus 337 r~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~ 370 (514)
T 1tdj_A 337 REALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYR 370 (514)
T ss_dssp CEEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEE
T ss_pred CcccccccCCCCCchHHHHHHHhC--CCceEEEEee
Confidence 346677888999999999999887 7999998876
No 234
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=25.39 E-value=3.9e+02 Score=24.32 Aligned_cols=53 Identities=6% Similarity=0.023 Sum_probs=31.8
Q ss_pred CCeeEEEEEeCC-ch--hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 127 ~~~rIavl~S~~-g~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
+++||+++..+. || .+..|...+++. .++|+.+.+.. ..+..+..|+++..++
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~--Gh~V~~~~~~~-------~~~~~~~~g~~~~~~~ 66 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVAR--GHRVSYAITDE-------FAAQVKAAGATPVVYD 66 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGG-------GHHHHHHHTCEEEECC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEecC
Confidence 457999976554 44 345555555432 37888654432 2455667788887665
No 235
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=25.04 E-value=2.1e+02 Score=25.33 Aligned_cols=57 Identities=12% Similarity=0.039 Sum_probs=36.6
Q ss_pred CeeEEEEEeCCc-hh-HHHHHHhhhcCCcCeeEEEEEeCCCCCC---CchHHHHHHHcCCCEEEEc
Q 020794 128 KYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 128 ~~rIavl~S~~g-~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~---~~~v~~~a~~~gIP~~~~~ 188 (321)
..++++..||.- |. +..++.... +.++.+|..+....+ ...+.++|++.|||+..++
T Consensus 25 ~~~vvv~lSGGiDSsv~~~l~~~~~----~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~ 86 (268)
T 1xng_A 25 FKKVVYGLSGGLDSAVVGVLCQKVF----KENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYS 86 (268)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHH----GGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEccCcHHHHHHHHHHHHhC----CCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 347999999973 43 344444321 346777777653211 1356788999999998876
No 236
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=24.51 E-value=89 Score=27.75 Aligned_cols=63 Identities=13% Similarity=0.083 Sum_probs=34.0
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (321)
.+||+|++.|. |..+...|.. .| ++|.+ .+++ ..-.+.+.+.|+... . +..+.++++|
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~--~G---~~V~~--~d~~----~~~~~~~~~~g~~~~--~--------~~~~~~~~aD 61 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLK--AG---YLLNV--FDLV----QSAVDGLVAAGASAA--R--------SARDAVQGAD 61 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH--TT---CEEEE--ECSS----HHHHHHHHHTTCEEC--S--------SHHHHHTTCS
T ss_pred CCEEEEEeecHHHHHHHHHHHh--CC---CeEEE--EcCC----HHHHHHHHHCCCeEc--C--------CHHHHHhCCC
Confidence 57999999887 5555444432 23 45543 3442 123344445565422 1 1223344789
Q ss_pred EEEEE
Q 020794 207 FLVLA 211 (321)
Q Consensus 207 livla 211 (321)
+++++
T Consensus 62 vvi~~ 66 (302)
T 2h78_A 62 VVISM 66 (302)
T ss_dssp EEEEC
T ss_pred eEEEE
Confidence 98876
No 237
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=24.45 E-value=1.3e+02 Score=25.43 Aligned_cols=57 Identities=4% Similarity=0.063 Sum_probs=34.7
Q ss_pred eEEEEEeCCchh---HHHHHH-hhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 130 KVAVLASKQEHC---LVDFLY-GWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 130 rIavl~S~~g~~---l~~lL~-~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
-++=+++..+.. +.+.++ .+.+..+. |.++.|-..+.....++++|+++|+|+..++
T Consensus 11 lvvGIGcrrg~~~~~i~~ai~~aL~~~gl~--v~~lATid~K~dE~gL~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 11 TVAGIGCRKGAASDAIIAAVRAAERAFGVT--VDYLATAPLKADEAGLAEAAKGLSLSLEIVA 71 (155)
T ss_dssp EEEEEEECSSCCHHHHHHHHHHHHHHHTCC--CCEEEESSCCSCCHHHHHHHHHTTCCEEECC
T ss_pred EEEEEccCCCCCHHHHHHHHHHHHHHCCCC--eEEEEchhhhCCCHHHHHHHHHhCCCeEEEC
Confidence 344456666643 333222 23333333 6666666544445688999999999999876
No 238
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=24.20 E-value=72 Score=26.03 Aligned_cols=19 Identities=21% Similarity=0.394 Sum_probs=15.4
Q ss_pred chHHHHHHHcCCCEEEEcC
Q 020794 171 SHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 171 ~~v~~~a~~~gIP~~~~~~ 189 (321)
..+..+|++++||+.++..
T Consensus 74 ~~l~~lc~~~~IP~~~v~s 92 (135)
T 2aif_A 74 LHLPLVCEDKNTPYVFVRS 92 (135)
T ss_dssp HHHHHHHHHTTCCEEEESC
T ss_pred hHHHHHHHhcCCcEEEECC
Confidence 4567889999999998753
No 239
>3r5t_A Ferric vibriobactin ABC transporter, periplasmic vibriobactin-binding protein; iron-vibriobactin transport protein; HET: VBN; 1.45A {Vibrio cholerae} PDB: 3r5s_A*
Probab=24.05 E-value=2.1e+02 Score=25.35 Aligned_cols=76 Identities=8% Similarity=0.017 Sum_probs=39.7
Q ss_pred CCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcC
Q 020794 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (321)
Q Consensus 125 ~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~ 204 (321)
..++.||+.+. .+..+.++. . | ..++++-.......-.+..+..+..++|..- ...+.+-|.++++ +
T Consensus 20 ~~~p~RIV~l~---~~~~e~l~a-L--G---~~~Vg~~~~~~~~~~~~~~~~~~~~~~~~vG--~~~~~n~E~I~al--~ 86 (305)
T 3r5t_A 20 PSQPKRILSTA---VTVTGTLLA-I--D---APVIASAATTQSTFFEQWRKLAELRQVKKLW--PAGSVDLESVYVE--Q 86 (305)
T ss_dssp CSCCSSEEESC---HHHHHHHHH-T--T---CCEEEEEECTTSCCCTTTHHHHHHTTCEEEE--ETTCCCHHHHHHH--C
T ss_pred cCCCeEEEEEC---cchhHHHHH-c--C---CceEEEeccccccccchhHhhHhhcCCCccC--CCCCCCHHHHHhc--C
Confidence 34678988765 344444443 2 3 3688876543211111222223456788653 1112233455554 9
Q ss_pred CCEEEEEee
Q 020794 205 TDFLVLARY 213 (321)
Q Consensus 205 ~Dlivlag~ 213 (321)
||+|+...+
T Consensus 87 PDLIi~~~~ 95 (305)
T 3r5t_A 87 PDLIVVSMI 95 (305)
T ss_dssp CSEEEEESS
T ss_pred CCEEEEecc
Confidence 999987765
No 240
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=23.84 E-value=2.8e+02 Score=25.22 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=30.3
Q ss_pred CeeEEEEEeCC-ch--hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc
Q 020794 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (321)
Q Consensus 128 ~~rIavl~S~~-g~--~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~ 188 (321)
++||+++..+. || .+..|...+++. .++|..+.+.. ..+..++.|+++..++
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~-------~~~~~~~~g~~~~~~~ 61 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPV-------FADKVAATGPRPVLYH 61 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGG-------GHHHHHTTSCEEEECC
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEEcC
Confidence 46999876544 33 244555554432 37887554332 2455667888887665
No 241
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=23.84 E-value=1.2e+02 Score=24.51 Aligned_cols=57 Identities=12% Similarity=0.025 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEe
Q 020794 103 DEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (321)
Q Consensus 103 ~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis 163 (321)
+.-...+|.++|+.-|-.+..+ . +|-+.+.|....+.++++.+++|...+.|.-|-.
T Consensus 50 R~~v~~~A~~lgL~G~VrN~~d--G--~Vei~~eG~~~~v~~f~~~l~~gPp~A~V~~v~~ 106 (121)
T 2lxf_A 50 RKYTKKEADALSLVGYVTNNED--G--SVSGVVQGPKEQVDAFVKYLHKGSPKSVVKKVSI 106 (121)
T ss_dssp HHHHHHHHHHHTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred hHHHHHHHHHcCCEEEEEECCC--C--CEEEEEEECHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 4556677889998776443332 2 4777777778889999999888865577776644
No 242
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=23.40 E-value=1.7e+02 Score=26.88 Aligned_cols=50 Identities=18% Similarity=0.141 Sum_probs=30.5
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEE
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~ 185 (321)
++||+|+|.|. |..+ +..+.+. ...++++|.... ......+++..|++++
T Consensus 2 ~irVgIiG~G~iG~~~---~r~l~~~-~~~elvav~d~~----~~~~~~~~~~~g~~~~ 52 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRV---AYAVTKQ-DDMELIGITKTK----PDFEAYRAKELGIPVY 52 (334)
T ss_dssp CEEEEEECCSHHHHHH---HHHHHTC-TTEEEEEEEESS----CSHHHHHHHHTTCCEE
T ss_pred CcEEEEEeEhHHHHHH---HHHHhcC-CCCEEEEEEcCC----HHHHHHHHHhcCcccc
Confidence 46999999754 3333 3332222 247888877643 2355677888888865
No 243
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=23.39 E-value=45 Score=26.58 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=27.8
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEE
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~ 187 (321)
+++|....+++ ++.|+ +..+.+-.|-+...-..+..+|..++||++++
T Consensus 27 ~~~G~~~t~ka----i~~gk--akLVilA~D~~~~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 27 YTLGYKTVLKT----LRSSL--GKLIILANNCPPLRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp EEESHHHHHHH----HHTTC--CSEEEECSCCCHHHHHHHHHHHHHTTCCEECC
T ss_pred eeECHHHHHHH----HHcCC--ceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 44554455544 44554 55554433332111235778899999999988
No 244
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=23.32 E-value=1e+02 Score=27.49 Aligned_cols=69 Identities=20% Similarity=0.213 Sum_probs=37.0
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCC
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~D 206 (321)
++||+|++.|. |..+..-|.. .|..+.+|. +.+++ .....++++++|+.+. . +..+.++++|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~--~g~~~~~V~--v~dr~---~~~~~~l~~~~gi~~~--~--------~~~~~~~~aD 65 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA--NGYDPNRIC--VTNRS---LDKLDFFKEKCGVHTT--Q--------DNRQGALNAD 65 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH--TTCCGGGEE--EECSS---SHHHHHHHHTTCCEEE--S--------CHHHHHSSCS
T ss_pred CCEEEEEcccHHHHHHHHHHHH--CCCCCCeEE--EEeCC---HHHHHHHHHHcCCEEe--C--------ChHHHHhcCC
Confidence 47999999876 4443332221 231122444 34442 2345556666687542 1 1223345899
Q ss_pred EEEEEee
Q 020794 207 FLVLARY 213 (321)
Q Consensus 207 livlag~ 213 (321)
+||++--
T Consensus 66 vVilav~ 72 (280)
T 3tri_A 66 VVVLAVK 72 (280)
T ss_dssp EEEECSC
T ss_pred eEEEEeC
Confidence 9998853
No 245
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=23.27 E-value=70 Score=29.34 Aligned_cols=45 Identities=7% Similarity=0.082 Sum_probs=26.5
Q ss_pred CeeEEEEEeCCc-h-hHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCC
Q 020794 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI 182 (321)
Q Consensus 128 ~~rIavl~S~~g-~-~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gI 182 (321)
++||+|+|.|.- . .....+.. .-.+++++|+... ...++++++++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~----~~~~~l~av~d~~------~~~~~a~~~~~ 48 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMI----RETLEVKTIFDLH------VNEKAAAPFKE 48 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTT----CTTEEEEEEECTT------CCHHHHHHHHT
T ss_pred eeEEEEEccCHHHHHHHHHHHhh----CCCeEEEEEECCC------HHHHHHHhhCC
Confidence 579999998863 2 22222322 1148898887643 23566777443
No 246
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=23.24 E-value=84 Score=25.54 Aligned_cols=82 Identities=11% Similarity=0.089 Sum_probs=47.0
Q ss_pred CCeeEEEEEeCCc--h-hHHHHHHhhhcCCcCeeEEEEEeCC-CCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh
Q 020794 127 PKYKVAVLASKQE--H-CLVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (321)
Q Consensus 127 ~~~rIavl~S~~g--~-~l~~lL~~~~~~~l~~~i~~Vis~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l 202 (321)
+++||.|+.+|+- | -.++++.....+.+.+.=+++-..+ ..+.+....+.++++||++.....+ ... ++. +
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr-~l~-~~~---~ 77 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRAR-QIT-KAD---F 77 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCC-CCC-SHH---H
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeec-cCC-HhH---h
Confidence 4678998888874 3 3566777655444433333433312 2234567889999999997422111 111 112 2
Q ss_pred cCCCEEEEEee
Q 020794 203 QNTDFLVLARY 213 (321)
Q Consensus 203 ~~~Dlivlag~ 213 (321)
..+|+|++..-
T Consensus 78 ~~~DlIi~m~~ 88 (146)
T 1p8a_A 78 SKFDVIAALDQ 88 (146)
T ss_dssp HSCSEEEESSH
T ss_pred hcCCEEEEeCh
Confidence 37999987644
No 247
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=23.15 E-value=3.1e+02 Score=26.86 Aligned_cols=64 Identities=5% Similarity=0.085 Sum_probs=37.1
Q ss_pred CChHHHHHHHHHHHHHhhhccceeeeCCCCCCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHH
Q 020794 97 WPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR 175 (321)
Q Consensus 97 ~~~~~L~~~L~~la~~lg~~~~~~r~~~~~~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~ 175 (321)
.....|...|.+.++ ..++.||++++.|. |+. ++..+... ...++++|+.... ....+
T Consensus 5 ~~~~~l~~~l~~r~~-------------~~k~IRVGIIGaG~iG~~---~~~~l~~~-~~veLvAV~D~~~----era~~ 63 (446)
T 3upl_A 5 VALVGLARDLAARAE-------------TGKPIRIGLIGAGEMGTD---IVTQVARM-QGIEVGALSARRL----PNTFK 63 (446)
T ss_dssp SCCCHHHHHHHHHHH-------------TTCCEEEEEECCSHHHHH---HHHHHTTS-SSEEEEEEECSST----HHHHH
T ss_pred cchHHHHHHHHHHHh-------------cCCceEEEEECChHHHHH---HHHHHhhC-CCcEEEEEEeCCH----HHHHH
Confidence 344567777765543 23678999999876 332 33333221 2478888775432 34555
Q ss_pred HHHHc-C
Q 020794 176 FLERH-G 181 (321)
Q Consensus 176 ~a~~~-g 181 (321)
.+++. |
T Consensus 64 ~a~~~yG 70 (446)
T 3upl_A 64 AIRTAYG 70 (446)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 66664 6
No 248
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=23.03 E-value=3.9e+02 Score=24.44 Aligned_cols=102 Identities=15% Similarity=0.211 Sum_probs=54.9
Q ss_pred CCeeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcC
Q 020794 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (321)
Q Consensus 127 ~~~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~ 204 (321)
..++++|+|+|.- ..+++|+.. . +.+-+ .+.|+. ....-..++.++.|+++..+ . +.+.+++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~---~--~~~~V-~v~~r~-~a~~la~~l~~~~g~~~~~~-~--------~~eav~~ 183 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR---F--ALEAI-LVHDPY-ASPEILERIGRRCGVPARMA-A--------PADIAAQ 183 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH---S--CCCEE-EEECTT-CCHHHHHHHHHHHTSCEEEC-C--------HHHHHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh---C--CCcEE-EEECCc-HHHHHHHHHHHhcCCeEEEe-C--------HHHHHhh
Confidence 3569999998863 344555442 1 22222 244554 11111223333468887654 1 1223347
Q ss_pred CCEEEEEeeccccchhhHhhhhhhhhhhhcccCcccccccccCChhHHhhcCCCeEEecCCCCCCCCCCh
Q 020794 205 TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (321)
Q Consensus 205 ~Dlivlag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~~INiHpslLP~yrG~~ 274 (321)
+|+|+++--.. -| +++.+.++ ++..|+-..|.-|..+=..
T Consensus 184 aDIVi~aT~s~-~p---------------------------vl~~~~l~--~G~~V~~vGs~~p~~~El~ 223 (313)
T 3hdj_A 184 ADIVVTATRST-TP---------------------------LFAGQALR--AGAFVGAIGSSLPHTRELD 223 (313)
T ss_dssp CSEEEECCCCS-SC---------------------------SSCGGGCC--TTCEEEECCCSSTTCCCCC
T ss_pred CCEEEEccCCC-Cc---------------------------ccCHHHcC--CCcEEEECCCCCCchhhcC
Confidence 99999875432 12 45544332 4567888888877765544
No 249
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=22.99 E-value=1.4e+02 Score=24.69 Aligned_cols=80 Identities=18% Similarity=0.130 Sum_probs=43.4
Q ss_pred CCeeEEEEEeCCc--hh-HHHHHHhhh-cCCcC--eeEE--EEEeCC-CCCCCchHHHHHHHcCCCEEEEcCCcchhHHH
Q 020794 127 PKYKVAVLASKQE--HC-LVDFLYGWQ-EGKLP--VEIT--CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (321)
Q Consensus 127 ~~~rIavl~S~~g--~~-l~~lL~~~~-~~~l~--~~i~--~Vis~~-~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~ 197 (321)
+++||.|+.+|+- |. .++++.... +..+. .+|. ++-..+ ..+.+....+.++++||++. ...+ ... ++
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar-~l~-~~ 79 (163)
T 1u2p_A 3 DPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAA-QVG-TE 79 (163)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCC-BCC-HH
T ss_pred CCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceee-ECC-hh
Confidence 4689999998884 33 345655532 11122 3342 222212 12345678899999999975 2221 111 11
Q ss_pred HHHHhcCCCEEEEEee
Q 020794 198 LLELVQNTDFLVLARY 213 (321)
Q Consensus 198 ~~~~l~~~Dlivlag~ 213 (321)
.+.+ |+|++..-
T Consensus 80 ---~~~~-DlIi~Md~ 91 (163)
T 1u2p_A 80 ---HLAA-DLLVALDR 91 (163)
T ss_dssp ---HHTS-SEEEESSH
T ss_pred ---hccC-CEEEEeCH
Confidence 2238 99987643
No 250
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=22.75 E-value=92 Score=27.37 Aligned_cols=117 Identities=14% Similarity=0.148 Sum_probs=56.3
Q ss_pred HHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhhccceeee----------CCCCCCeeE
Q 020794 62 CIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRV----------PDIDPKYKV 131 (321)
Q Consensus 62 ~La~~G~NI~d~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~~~~~~r~----------~~~~~~~rI 131 (321)
.|.+.|...+.+++-.. ...++.++++.+|.-++. +|...--+++ -..++++||
T Consensus 25 ~l~~~g~~~iss~~l~~---------------~~~~~~~~iRkdls~fg~-~G~~g~gY~v~~L~~~~~~~lg~~~~~rV 88 (215)
T 2vt3_A 25 NLHASGKQRVSSAELSD---------------AVKVDSATIRRDFSYFGA-LGKKGYGYNVDYLLSFFRKTLDQDEMTDV 88 (215)
T ss_dssp HHHHTTCCEECHHHHHH---------------HHCCCHHHHHHHHHHTTC-CC-----EEHHHHHHHHHHHHHHC---CE
T ss_pred HHHHcCCcEECHHHHHH---------------HhCCCHHHeechHHHHHH-hcCCcceEEhHHHHHHHHHHhCcCCCCEE
Confidence 35667777666555321 013456777777776632 2221112222 012456799
Q ss_pred EEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCCCEEEE
Q 020794 132 AVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVL 210 (321)
Q Consensus 132 avl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~Dlivl 210 (321)
+|+|.|. |..+. ..........++++++...++..+. .-+|+|+...+ ++.+++++.|.+++
T Consensus 89 ~IIGAG~~G~~La---~~~~~~~~g~~iVg~~D~dp~k~g~------~i~gv~V~~~~--------dl~eli~~~D~ViI 151 (215)
T 2vt3_A 89 ILIGVGNLGTAFL---HYNFTKNNNTKISMAFDINESKIGT------EVGGVPVYNLD--------DLEQHVKDESVAIL 151 (215)
T ss_dssp EEECCSHHHHHHH---HCC------CCEEEEEESCTTTTTC------EETTEEEEEGG--------GHHHHCSSCCEEEE
T ss_pred EEEccCHHHHHHH---HHHhcccCCcEEEEEEeCCHHHHHh------HhcCCeeechh--------hHHHHHHhCCEEEE
Confidence 9998776 34333 2111122357899999876432111 12467776421 24555542388877
Q ss_pred E
Q 020794 211 A 211 (321)
Q Consensus 211 a 211 (321)
|
T Consensus 152 A 152 (215)
T 2vt3_A 152 T 152 (215)
T ss_dssp C
T ss_pred e
Confidence 6
No 251
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=22.73 E-value=1.1e+02 Score=25.30 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=24.4
Q ss_pred CcccEEEEEEcCCccchHHHHHHHHHhc--CCeEeEe
Q 020794 39 TLTHGIHVFHCPDEVGIVAKLSECIASR--GGNILAA 73 (321)
Q Consensus 39 ~~~~~Iltv~G~Dr~GIVA~VS~~La~~--G~NI~d~ 73 (321)
..|+..++++=.||+-+|. +++.+.+. |.+|...
T Consensus 2 ~~~~ialsv~D~dK~~~v~-~a~~~~~ll~Gf~l~AT 37 (134)
T 2xw6_A 2 HMRALALIAHDAKKEEMVA-FCQRHREVLARFPLVAT 37 (134)
T ss_dssp CSCEEEEEECGGGHHHHHH-HHHHTHHHHTTSCEEEC
T ss_pred CccEEEEEEecccHHHHHH-HHHHHHHHhCCCEEEEc
Confidence 4577888888888888764 46677777 7776654
No 252
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=22.70 E-value=2.3e+02 Score=24.96 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=46.0
Q ss_pred CCCCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeee----------------------ccCCCCeEEEEEEEE
Q 020794 34 SSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVF----------------------VPEKKNVFYSRSEFI 91 (321)
Q Consensus 34 ~~~~~~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d~~q~----------------------~~~l~g~F~Mr~~v~ 91 (321)
++|+.....-++.|+|..+ ||=.+++..|++.|++++-++.. .....+. ...+.+|
T Consensus 20 ~~m~~~l~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D 97 (299)
T 3t7c_A 20 GSMAGKVEGKVAFITGAAR-GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR-IIASQVD 97 (299)
T ss_dssp --CCCTTTTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred cccccccCCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence 3444444444566677764 88889999999999998765321 0001122 2233444
Q ss_pred eCCCCCChHHHHHHHHHHHHHhh
Q 020794 92 FDPIKWPREQMDEDFFKLSKMFN 114 (321)
Q Consensus 92 ~~~~~~~~~~L~~~L~~la~~lg 114 (321)
+. +.+++++.++++.+++|
T Consensus 98 v~----~~~~v~~~~~~~~~~~g 116 (299)
T 3t7c_A 98 VR----DFDAMQAAVDDGVTQLG 116 (299)
T ss_dssp TT----CHHHHHHHHHHHHHHHS
T ss_pred CC----CHHHHHHHHHHHHHHhC
Confidence 43 57888888888877775
No 253
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=22.60 E-value=1.4e+02 Score=29.12 Aligned_cols=60 Identities=13% Similarity=0.077 Sum_probs=38.8
Q ss_pred CCCCeeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCCC-CchHHHHHHHcCC-CEEEEcC
Q 020794 125 IDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGI-PYHYLCA 189 (321)
Q Consensus 125 ~~~~~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~-~~~v~~~a~~~gI-P~~~~~~ 189 (321)
-..|.||+|..||.- +++..+|.. +| .+|.+|..+-.... -..+.+.|++.|| |+++++-
T Consensus 11 ~~~~~KVVVA~SGGlDSSv~a~~Lke--~G---~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl 74 (421)
T 1vl2_A 11 HHMKEKVVLAYSGGLDTSVILKWLCE--KG---FDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDL 74 (421)
T ss_dssp ---CCEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEEC
T ss_pred ccccCCEEEEeCCcHHHHHHHHHHHH--CC---CeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEec
Confidence 456789999999973 344444432 24 68888876643211 2467889999999 8888773
No 254
>3bbn_F Ribosomal protein S6; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=22.37 E-value=3e+02 Score=23.56 Aligned_cols=61 Identities=11% Similarity=0.183 Sum_probs=41.5
Q ss_pred EEEEEcCC-----ccchHHHHHHHHHhcCCeEeEeeeec--------cCC----------CCeEEEEEEEEeCCCCCChH
Q 020794 44 IHVFHCPD-----EVGIVAKLSECIASRGGNILAADVFV--------PEK----------KNVFYSRSEFIFDPIKWPRE 100 (321)
Q Consensus 44 Iltv~G~D-----r~GIVA~VS~~La~~G~NI~d~~q~~--------~~l----------~g~F~Mr~~v~~~~~~~~~~ 100 (321)
++.+.=|| ...+|..+.+.|.++|+.|.+++--. ... +|.|+ .|.++.+.. ..+
T Consensus 67 ~m~IlrPdl~eeev~alver~~~iI~~~GG~I~~ve~WG~RrLAY~IkK~~kgg~~~~h~eG~Yv-lm~F~a~p~--~I~ 143 (168)
T 3bbn_F 67 TMAVLRPDMTEDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYL-LFTYFTKPE--SIS 143 (168)
T ss_dssp EEEEECTTSCHHHHHSTTHHHHHHHTTTSCEEEEEEEEEECCCSSCTTSCSSSCSSCCCCCCEEE-EEEEEECTT--SSH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEecccccccceeccCcccccccccceEEEE-EEEEEeCHH--HHH
Confidence 45555566 45889999999999999999977542 211 36666 667777642 456
Q ss_pred HHHHHHH
Q 020794 101 QMDEDFF 107 (321)
Q Consensus 101 ~L~~~L~ 107 (321)
+|+..|.
T Consensus 144 ELeR~Lr 150 (168)
T 3bbn_F 144 PLEAALV 150 (168)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 6666555
No 255
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=22.35 E-value=79 Score=30.76 Aligned_cols=71 Identities=21% Similarity=0.256 Sum_probs=40.8
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHh--c
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--Q 203 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l--~ 203 (321)
..|||.|+|.|. |..+...|.. + .++|+.|=.++ ..+.+...+.++++..-+ ..+.++++.. +
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~--~---~~~v~vId~d~-----~~~~~~~~~~~~~~i~Gd----~~~~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVG--E---NNDITIVDKDG-----DRLRELQDKYDLRVVNGH----ASHPDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCS--T---TEEEEEEESCH-----HHHHHHHHHSSCEEEESC----TTCHHHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHH--C---CCCEEEEECCH-----HHHHHHHHhcCcEEEEEc----CCCHHHHHhcCCC
Confidence 368999988877 5555554432 2 36776442222 234555667898877533 2233455443 3
Q ss_pred CCCEEEEE
Q 020794 204 NTDFLVLA 211 (321)
Q Consensus 204 ~~Dlivla 211 (321)
++|+++.+
T Consensus 68 ~ad~~ia~ 75 (461)
T 4g65_A 68 DADMLVAV 75 (461)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEE
Confidence 78877643
No 256
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=22.21 E-value=1.6e+02 Score=24.39 Aligned_cols=67 Identities=7% Similarity=0.147 Sum_probs=38.6
Q ss_pred CCeeEEEEEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEc-CCcchh--HHHHHHHhc
Q 020794 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENER--EEELLELVQ 203 (321)
Q Consensus 127 ~~~rIavl~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~-~~~~~~--~~~~~~~l~ 203 (321)
+++|++|+.+|..- |+. .+. ....+.+++++.|+.+.... -+++.. .+.+.+.++
T Consensus 12 ~~~rv~Ii~tGdEl-----------g~i--------~Ds---n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~ 69 (169)
T 1y5e_A 12 KEVRCKIVTISDTR-----------TEE--------TDK---SGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYH 69 (169)
T ss_dssp CCCEEEEEEECSSC-----------CTT--------TCH---HHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHT
T ss_pred cCCEEEEEEEcCcc-----------Cee--------ccC---hHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHh
Confidence 57899999988753 110 010 12345677778887665433 122211 234555555
Q ss_pred --CCCEEEEEeecc
Q 020794 204 --NTDFLVLARYMQ 215 (321)
Q Consensus 204 --~~Dlivlag~~~ 215 (321)
++|+|++.|=.-
T Consensus 70 ~~~~DlVittGG~g 83 (169)
T 1y5e_A 70 KEDVDVVLTNGGTG 83 (169)
T ss_dssp CTTCSEEEEECCCS
T ss_pred cCCCCEEEEcCCCC
Confidence 689999987664
No 257
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=22.09 E-value=51 Score=25.28 Aligned_cols=48 Identities=13% Similarity=0.160 Sum_probs=26.0
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEE
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~ 187 (321)
+.+|....++++ +.|+ +.++.+-+|-+...-..+..+|++++||++.+
T Consensus 17 l~~G~~~v~kai----~~gk--a~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 17 IVMGARKSIQYA----KMGG--AKLIIVARNARPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp EEESHHHHHHHH----HHTC--CSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EeECHHHHHHHH----HcCC--CcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 445544444443 4453 45553333321101245678899999998875
No 258
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=21.88 E-value=1.5e+02 Score=24.19 Aligned_cols=81 Identities=15% Similarity=0.112 Sum_probs=44.1
Q ss_pred CeeEEEEEeCCc--hh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcC
Q 020794 128 KYKVAVLASKQE--HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (321)
Q Consensus 128 ~~rIavl~S~~g--~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~ 204 (321)
++||.|+.+|+- |. .++++.... +++.+.=+++-.....+.+....+.++++||++.....+ ... ++ .+..
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~~~~g~~~~p~a~~~l~e~Gid~~~~~ar-~l~-~~---~~~~ 81 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGALVDHTADESAIRVAEKNGLCLKGHRGT-KFT-SA---LARQ 81 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCC-BCC-HH---HHTT
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEeccccCCCCCCCCHHHHHHHHHcCCCccCCccc-CCC-HH---Hhcc
Confidence 358999888884 44 455666543 222222223322222334567889999999986321111 111 11 1237
Q ss_pred CCEEEEEeec
Q 020794 205 TDFLVLARYM 214 (321)
Q Consensus 205 ~Dlivlag~~ 214 (321)
+|+|++..-.
T Consensus 82 ~DlIi~m~~~ 91 (150)
T 2wmy_A 82 YDLLLVMEYS 91 (150)
T ss_dssp CSEEEESCHH
T ss_pred CCEEEEcCHH
Confidence 9999876443
No 259
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=21.84 E-value=3.2e+02 Score=24.12 Aligned_cols=80 Identities=13% Similarity=0.110 Sum_probs=39.4
Q ss_pred eeEEEEEeCCc--hhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCE-EEEcCC---cch-h-----HH
Q 020794 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCAK---ENE-R-----EE 196 (321)
Q Consensus 129 ~rIavl~S~~g--~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~-~~~~~~---~~~-~-----~~ 196 (321)
|||.+++.... ..+..|+..+++.. +.++..+++.... ....+.....|+++ ..++.. .+. + -.
T Consensus 1 mkIl~v~~~~~~~~~~~~l~~~L~~~g-~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 1vgv_A 1 MKVLTVFGTRPEAIKMAPLVHALAKDP-FFEAKVCVTAQHR---EMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILE 76 (384)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHST-TCEEEEEECCSSG---GGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHH
T ss_pred CeEEEEecccHHHHHHHHHHHHHHhCC-CCceEEEEcCCCH---HHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHH
Confidence 68887653322 12445666655432 2355545554321 12344555678765 333321 111 1 12
Q ss_pred HHHHHhc--CCCEEEEEe
Q 020794 197 ELLELVQ--NTDFLVLAR 212 (321)
Q Consensus 197 ~~~~~l~--~~Dlivlag 212 (321)
.+.++++ ++|++++.+
T Consensus 77 ~l~~~l~~~~pDvv~~~~ 94 (384)
T 1vgv_A 77 GLKPILAEFKPDVVLVHG 94 (384)
T ss_dssp HHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHHhCCCEEEEeC
Confidence 4455554 899998865
No 260
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=21.77 E-value=3.1e+02 Score=26.80 Aligned_cols=58 Identities=7% Similarity=0.116 Sum_probs=37.6
Q ss_pred CCCeeEEEEEeCC--chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcC
Q 020794 126 DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 126 ~~~~rIavl~S~~--g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (321)
...+||+||||-. |..--+++.+ ..-..+|+++..++. -.-+.+.|++++-.+..+..
T Consensus 7 ~~~k~i~ILGSTGSIGtqtLdVi~~---~pd~f~V~aL~ag~n---v~~L~~q~~~f~p~~v~v~d 66 (406)
T 1q0q_A 7 SGMKQLTILGSTGSIGCSTLDVVRH---NPEHFRVVALVAGKN---VTRMVEQCLEFSPRYAVMDD 66 (406)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHH---CTTTEEEEEEEESSC---HHHHHHHHHHHCCSEEEESS
T ss_pred CCceeEEEEccCcHHHHHHHHHHHh---CCCccEEEEEEcCCC---HHHHHHHHHHhCCCEEEEcC
Confidence 3567999999875 3333344443 322488998887651 23567889999988877653
No 261
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=21.56 E-value=3e+02 Score=21.75 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=26.4
Q ss_pred HHHHHHcCCC-EEEEcCCcchhHHHHHHHhc--CCCEEEEEeecc
Q 020794 174 IRFLERHGIP-YHYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (321)
Q Consensus 174 ~~~a~~~gIP-~~~~~~~~~~~~~~~~~~l~--~~Dlivlag~~~ 215 (321)
.+.+++.|++ +...-..+ ...+++.+..+ ++|+||+....+
T Consensus 87 ~~~~~~~gv~~v~~~v~~G-~~~~~I~~~a~~~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 87 KERAHNAGAKNVEERPIVG-APVDALVNLADEEKADLLVVGNVGL 130 (163)
T ss_dssp HHHHHTTTCCEEEEEEECS-SHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred HHHHHHcCCCeEEEEEecC-CHHHHHHHHHHhcCCCEEEECCCCC
Confidence 3445667898 65432222 23457777664 899999987765
No 262
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=21.45 E-value=2.3e+02 Score=28.32 Aligned_cols=62 Identities=10% Similarity=0.090 Sum_probs=38.0
Q ss_pred CCCCeeEEEEEeCC--chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcC
Q 020794 125 IDPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 125 ~~~~~rIavl~S~~--g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (321)
..+++||+||||-. |..--+++.+.....-..+|+++..++. -.-+.+.|++++-.+..+..
T Consensus 74 ~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~N---v~lL~eQ~~ef~P~~v~v~d 137 (488)
T 3au8_A 74 IKKPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKS---VNELYEQAREFLPEYLCIHD 137 (488)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSC---HHHHHHHHHHHCCSEEEESC
T ss_pred hhcceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCC---HHHHHHHHHHcCCCEEEEcC
Confidence 34567899999875 3444445554210111378888877651 23567889999988877653
No 263
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=21.38 E-value=2e+02 Score=22.59 Aligned_cols=72 Identities=8% Similarity=-0.016 Sum_probs=34.9
Q ss_pred CeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHH--HHcCCCEEEEcCCcchhHHHHHHH-hc
Q 020794 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL--ERHGIPYHYLCAKENEREEELLEL-VQ 203 (321)
Q Consensus 128 ~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a--~~~gIP~~~~~~~~~~~~~~~~~~-l~ 203 (321)
+.||.|+|.|. |..+...|.. .| ++++.|-.+.+ ....+.. ...|+++...+. ...+.+.+. +.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g---~~V~vid~~~~----~~~~~~~~~~~~~~~~i~gd~---~~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RG---QNVTVISNLPE----DDIKQLEQRLGDNADVIPGDS---NDSSVLKKAGID 70 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCCH----HHHHHHHHHHCTTCEEEESCT---TSHHHHHHHTTT
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCCh----HHHHHHHHhhcCCCeEEEcCC---CCHHHHHHcChh
Confidence 46888887654 3444443332 23 56664432210 1111222 234787765432 122333333 45
Q ss_pred CCCEEEEE
Q 020794 204 NTDFLVLA 211 (321)
Q Consensus 204 ~~Dlivla 211 (321)
++|.++++
T Consensus 71 ~ad~vi~~ 78 (153)
T 1id1_A 71 RCRAILAL 78 (153)
T ss_dssp TCSEEEEC
T ss_pred hCCEEEEe
Confidence 88988765
No 264
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=21.37 E-value=2.8e+02 Score=24.20 Aligned_cols=75 Identities=15% Similarity=0.138 Sum_probs=39.2
Q ss_pred CeeEEEEEe-CC-chh-HHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcC
Q 020794 128 KYKVAVLAS-KQ-EHC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (321)
Q Consensus 128 ~~rIavl~S-~~-g~~-l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~ 204 (321)
++||+|.|. |. |.. .+.|++. | ++|.++.-+.. .....++.....|+.+...+- ...+++.+.+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~l~R~~~--~~~~~~~~l~~~~v~~v~~Dl---~d~~~l~~a~~~ 79 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKL---G---HPTYVFTRPNS--SKTTLLDEFQSLGAIIVKGEL---DEHEKLVELMKK 79 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT---T---CCEEEEECTTC--SCHHHHHHHHHTTCEEEECCT---TCHHHHHHHHTT
T ss_pred CCeEEEECCCchHHHHHHHHHHHC---C---CcEEEEECCCC--chhhHHHHhhcCCCEEEEecC---CCHHHHHHHHcC
Confidence 347887763 32 333 4455543 3 56665433221 122222222456787766552 123567777778
Q ss_pred CCEEEEEee
Q 020794 205 TDFLVLARY 213 (321)
Q Consensus 205 ~Dlivlag~ 213 (321)
+|.+|.+..
T Consensus 80 ~d~vi~~a~ 88 (318)
T 2r6j_A 80 VDVVISALA 88 (318)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 998876543
No 265
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=20.98 E-value=83 Score=30.63 Aligned_cols=58 Identities=14% Similarity=0.228 Sum_probs=35.4
Q ss_pred CeeEEEEEeCCchhHHHHH-----Hhh-h--cCC-cCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcC
Q 020794 128 KYKVAVLASKQEHCLVDFL-----YGW-Q--EGK-LPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (321)
Q Consensus 128 ~~rIavl~S~~g~~l~~lL-----~~~-~--~~~-l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~ 189 (321)
+.-++|++|++|+..+.+. ..+ . .|+ ....+++| |++ ..+++.+.|.+.||+++.++.
T Consensus 116 ~~TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~vav-T~~---~~s~L~~~a~~~Gi~~f~~~d 182 (415)
T 1zzg_A 116 RKTLVNAVSKSGSTAETLAGLAVFLKWLKAHLGEDWRRHLVVT-TDP---KEGPLRAFAEREGLKAFAIPK 182 (415)
T ss_dssp GGEEEEEEESSSCCHHHHHHHHHHHHHHHHHHGGGGGGGEEEE-ECS---SSSHHHHHHHHHTCEEEECCT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCccccCeEEEE-eCC---CCChHHHHHHHhCCcEEEecc
Confidence 3457889999996433221 112 1 131 12456645 443 246899999999999888763
No 266
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=20.83 E-value=3.8e+02 Score=25.32 Aligned_cols=74 Identities=16% Similarity=0.180 Sum_probs=37.2
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHH---HcCCC-EEEEcCCcchhHHHHHHH
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE---RHGIP-YHYLCAKENEREEELLEL 201 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~---~~gIP-~~~~~~~~~~~~~~~~~~ 201 (321)
+++||+|++.|. |.. .+..+..- -.+++++|+...+ ....++++ ++|+| ...... .+.++.++
T Consensus 19 ~~~rvgiIG~G~~g~~---h~~~l~~~-~~~~lvav~d~~~----~~~~~~a~~~~~~g~~~~~~~~~----~~~~~~~l 86 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQT---HVENMARR-DDVEIVAFADPDP----YMVGRAQEILKKNGKKPAKVFGN----GNDDYKNM 86 (444)
T ss_dssp CCEEEEEECCSHHHHH---HHHHHHTC-TTEEEEEEECSCH----HHHHHHHHHHHHTTCCCCEEECS----STTTHHHH
T ss_pred CCceEEEEecCHHHHH---HHHHHHhC-CCcEEEEEEeCCH----HHHHHHHHHHHhcCCCCCceecc----CCCCHHHH
Confidence 468999998774 222 22222221 1478888765431 23344444 56775 222220 00123444
Q ss_pred hc--CCCEEEEEe
Q 020794 202 VQ--NTDFLVLAR 212 (321)
Q Consensus 202 l~--~~Dlivlag 212 (321)
++ ++|+|+++.
T Consensus 87 l~~~~vD~V~i~t 99 (444)
T 2ixa_A 87 LKDKNIDAVFVSS 99 (444)
T ss_dssp TTCTTCCEEEECC
T ss_pred hcCCCCCEEEEcC
Confidence 54 577777664
No 267
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=20.70 E-value=2.3e+02 Score=26.02 Aligned_cols=36 Identities=8% Similarity=0.100 Sum_probs=20.7
Q ss_pred CCCeeEEEEEeCCc-hh-HHHHHHhhhcCCcCeeEEEEEeCC
Q 020794 126 DPKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNH 165 (321)
Q Consensus 126 ~~~~rIavl~S~~g-~~-l~~lL~~~~~~~l~~~i~~Vis~~ 165 (321)
.+++||+|+|.|.- .. ....+... + ..++++|+...
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~--~--~~~l~av~d~~ 42 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSV--P--GLNLAFVASRD 42 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTS--T--TEEEEEEECSC
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhC--C--CeEEEEEEcCC
Confidence 46789999998763 22 23333321 1 47888887543
No 268
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.18.14
Probab=20.65 E-value=2.9e+02 Score=21.14 Aligned_cols=68 Identities=15% Similarity=0.033 Sum_probs=44.7
Q ss_pred CCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeE-eeeeccCCCCeEEEEEEEEeCCCCCChHHHHHHHHHHHHHhhh
Q 020794 38 PTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILA-ADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (321)
Q Consensus 38 ~~~~~~Iltv~G~Dr~GIVA~VS~~La~~G~NI~d-~~q~~~~l~g~F~Mr~~v~~~~~~~~~~~L~~~L~~la~~lg~ 115 (321)
+.+..+|+.++=.||.-.-.+|=+.|.++|++|.- +--.- +..+.=..-+.++.+. +.+.++..++|.
T Consensus 3 m~~ri~vigIiVe~r~~~a~kvn~iL~~yg~~I~gRmGiP~-~~~~~~iIsl~v~~~~---------d~I~aL~gkLg~ 71 (86)
T 2nzc_A 3 MEKRFYILTIVVEDREKAYRQVNELLHNFSEDILLRVGYPV-REENMAIIFLVLKTDN---------DTIGALSGKLGQ 71 (86)
T ss_dssp -CCEEEEEEEEEESCHHHHHHHHHHHHHTGGGEEEEEEEEE-GGGTEEEEEEEEEECH---------HHHHHHHHHHHT
T ss_pred cceeEEEEEEEEeCchhhHHHHHHHHHhccCEEEEEcCCCc-CcCCceEEEEEEECCH---------HHHHHHHHHhCC
Confidence 34566788888788875444999999999999986 21111 2345555566666653 456667777764
No 269
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=20.51 E-value=2.3e+02 Score=27.75 Aligned_cols=161 Identities=12% Similarity=0.050 Sum_probs=82.5
Q ss_pred cEEEEEEcCC-ccchHHHHHHHHHhcCCeEe-Eeee--eccC----CCCeEEEEE-------------------EEEeCC
Q 020794 42 HGIHVFHCPD-EVGIVAKLSECIASRGGNIL-AADV--FVPE----KKNVFYSRS-------------------EFIFDP 94 (321)
Q Consensus 42 ~~Iltv~G~D-r~GIVA~VS~~La~~G~NI~-d~~q--~~~~----l~g~F~Mr~-------------------~v~~~~ 94 (321)
..-|.++|.- -+|=+..+...|.+.|+.+. +..- +.+. .+..+++.+ .+..+
T Consensus 203 ~~~VNiiG~~~~~gd~~eik~lL~~~Gi~v~~~~~gg~~~~el~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~~- 281 (483)
T 3pdi_A 203 VHDVNLIGEYNIAGEFWHVLPLLDELGLRVLCTLAGDARYREVQTMHRAEVNMMVCSKAMLNVARKLQETYGTPWFEGS- 281 (483)
T ss_dssp CEEEEEESCCCBTTGGGGTHHHHHHHTEEEEEEETSSBCHHHHTTGGGCSEEEEESCCTTHHHHHHHHHHHCCCEEEEC-
T ss_pred CCeEEEEcCCCChhHHHHHHHHHHHCCCcEEEECCCcCCHHHHHhhhcCCEEEEEchhhHHHHHHHHHHHhCCCEeecC-
Confidence 3567777754 36777889999999999986 3221 1100 011233222 11111
Q ss_pred CCCChHHHHHHHHHHHHHhhhccc------ee-----ee-------CCCCCCeeEEEEEeCCc-hhHHHHHHhhhcCCcC
Q 020794 95 IKWPREQMDEDFFKLSKMFNAMRS------VV-----RV-------PDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLP 155 (321)
Q Consensus 95 ~~~~~~~L~~~L~~la~~lg~~~~------~~-----r~-------~~~~~~~rIavl~S~~g-~~l~~lL~~~~~~~l~ 155 (321)
....+...+-|+++++-+|.... .+ ++ ...-.-+|++|++.+.- ..+..+|. ++.
T Consensus 282 -p~Gi~~T~~~L~~ia~~~g~~~i~~~~e~~i~~er~~~~~al~~~~~~l~GKrv~i~~~~~~~~~l~~~L~-----ElG 355 (483)
T 3pdi_A 282 -FYGITDTSQALRDFARLLDDPDLTARTEALIAREEAKVRAALEPWRARLEGKRVLLYTGGVKSWSVVSALQ-----DLG 355 (483)
T ss_dssp -SSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHH-----HHT
T ss_pred -CCCHHHHHHHHHHHHHHhCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEECCCchHHHHHHHHH-----HCC
Confidence 36788888888888877763210 00 00 00012479998775432 23444443 245
Q ss_pred eeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhc--CCCEEEEEeec
Q 020794 156 VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYM 214 (321)
Q Consensus 156 ~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~--~~Dlivlag~~ 214 (321)
.+|+.+.+.... .....+..+..+.....++. ....++.+.++ +||+++-..+.
T Consensus 356 mevv~~gt~~~~--~~d~~~~~~~l~~~~~i~~d---~d~~el~~~i~~~~pDL~ig~~~~ 411 (483)
T 3pdi_A 356 MKVVATGTKKST--EEDKARIRELMGDDVKMLDE---GNARVLLKTVDEYQADILIAGGRN 411 (483)
T ss_dssp CEEEEECBSSSC--HHHHHHHHHHSCSSCCBCCS---CSHHHHHHHHHHTTCSEEECCGGG
T ss_pred CEEEEEecCCCC--HHHHHHHHHhcCCCCEEEeC---CCHHHHHHHHHhcCCCEEEECCch
Confidence 788877665321 11112222333433233322 12356667665 89999765443
No 270
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=20.36 E-value=66 Score=25.79 Aligned_cols=49 Identities=14% Similarity=0.272 Sum_probs=28.8
Q ss_pred EEeCCchhHHHHHHhhhcCCcCeeEEEEEeCCCCCCC---chHHHHHHHcCCCEEEEcCC
Q 020794 134 LASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAK 190 (321)
Q Consensus 134 l~S~~g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~---~~v~~~a~~~gIP~~~~~~~ 190 (321)
+.+|... .+..+++|+ ++++.+-.+- .+. ..+..+|+++|||+.+++.+
T Consensus 26 l~~G~~~----v~kaI~~gk--a~LVvIA~D~--~p~~i~~~l~~lC~~~~VP~~~v~sk 77 (113)
T 3jyw_G 26 VKYGLNH----VVALIENKK--AKLVLIANDV--DPIELVVFLPALCKKMGVPYAIVKGK 77 (113)
T ss_dssp EEESHHH----HHHTTTTTC--CSEEEECSCC--SSHHHHTTHHHHHHHTTCCCEECSCS
T ss_pred hhchHHH----HHHHHHcCC--ceEEEEeCCC--CHHHHHHHHHHHHHHcCCCEEEECCH
Confidence 4455433 344455554 5555333332 121 35678999999999988754
No 271
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.26 E-value=2.7e+02 Score=25.03 Aligned_cols=12 Identities=17% Similarity=0.108 Sum_probs=8.4
Q ss_pred CCCeeEEEEEeC
Q 020794 126 DPKYKVAVLASK 137 (321)
Q Consensus 126 ~~~~rIavl~S~ 137 (321)
.+.+|+.|++-.
T Consensus 6 ~~m~~~~vi~Np 17 (304)
T 3s40_A 6 TKFEKVLLIVNP 17 (304)
T ss_dssp CSCSSEEEEECT
T ss_pred CCCCEEEEEECc
Confidence 346789998844
No 272
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=20.20 E-value=1.4e+02 Score=26.98 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=34.6
Q ss_pred CCeeEEEEEeCC-chhHHHHHHhhhcCCcCeeEEEEEeCCCCCCCchHHHHHHHcCCCEEEEcCCcchhHHHHHHHhcCC
Q 020794 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (321)
Q Consensus 127 ~~~rIavl~S~~-g~~l~~lL~~~~~~~l~~~i~~Vis~~~~~~~~~v~~~a~~~gIP~~~~~~~~~~~~~~~~~~l~~~ 205 (321)
..+||+|++.|. |..+...|.. .| ++|. +.+++ ..-.+.+.+.|+... . ++.+.++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~--~G---~~V~--~~dr~----~~~~~~l~~~g~~~~--~--------~~~e~~~~a 88 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE--AG---YALQ--VWNRT----PARAASLAALGATIH--E--------QARAAARDA 88 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH--TT---CEEE--EECSC----HHHHHHHHTTTCEEE--S--------SHHHHHTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHh--CC---CeEE--EEcCC----HHHHHHHHHCCCEee--C--------CHHHHHhcC
Confidence 457999999887 5555444432 23 4554 33542 122334444565332 1 123344578
Q ss_pred CEEEEE
Q 020794 206 DFLVLA 211 (321)
Q Consensus 206 Dlivla 211 (321)
|+++++
T Consensus 89 DvVi~~ 94 (320)
T 4dll_A 89 DIVVSM 94 (320)
T ss_dssp SEEEEC
T ss_pred CEEEEE
Confidence 998876
Done!