Your job contains 1 sequence.
>020797
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD
YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET
DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE
LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY
RKEADFSTDDMILGKKLVLQA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020797
(321 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2203028 - symbol:CRB "chloroplast RNA binding"... 1564 1.4e-160 1
TAIR|locus:2099222 - symbol:CSP41A "AT3G63140" species:37... 502 4.7e-48 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 157 5.6e-09 1
SGD|S000003979 - symbol:YLL056C "Putative protein of unkn... 129 8.5e-06 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 127 2.2e-05 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 125 3.0e-05 2
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 121 8.1e-05 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 121 8.1e-05 1
TIGR_CMR|GSU_0385 - symbol:GSU_0385 "NADH dehydrogenase s... 104 9.3e-05 2
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 122 9.3e-05 1
TAIR|locus:2025192 - symbol:AT1G75280 species:3702 "Arabi... 120 9.9e-05 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 121 0.00010 1
UNIPROTKB|Q83DM2 - symbol:CBU_0681 "NAD dependent epimera... 119 0.00012 1
TIGR_CMR|CBU_0681 - symbol:CBU_0681 "conserved hypothetic... 119 0.00012 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 121 0.00013 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 121 0.00013 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 121 0.00013 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 121 0.00013 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 121 0.00013 1
DICTYBASE|DDB_G0281487 - symbol:DDB_G0281487 "3-beta-hydr... 114 0.00016 2
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 122 0.00020 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 119 0.00022 1
UNIPROTKB|Q71YS4 - symbol:LMOf2365_1769 "Putative unchara... 115 0.00032 1
UNIPROTKB|Q81JK7 - symbol:BA_5697 "Uncharacterized protei... 115 0.00032 1
TIGR_CMR|BA_5697 - symbol:BA_5697 "conserved hypothetical... 115 0.00032 1
TAIR|locus:2025197 - symbol:AT1G75290 species:3702 "Arabi... 113 0.00064 1
UNIPROTKB|Q749U5 - symbol:GSU2647 "NAD-dependent nucleosi... 111 0.00090 1
TIGR_CMR|GSU_2647 - symbol:GSU_2647 "conserved hypothetic... 111 0.00090 1
>TAIR|locus:2203028 [details] [associations]
symbol:CRB "chloroplast RNA binding" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0010319 "stromule" evidence=IDA] [GO:0042631 "cellular response
to water deprivation" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP;RCA] [GO:0042742 "defense response to bacterium"
evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=IEP;IMP] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA]
[GO:0005840 "ribosome" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=IGI;RCA] [GO:0048046 "apoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0032544 "plastid translation"
evidence=IMP] [GO:0045727 "positive regulation of translation"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA;IMP] [GO:0005996 "monosaccharide
metabolic process" evidence=IMP] [GO:0010297 "heteropolysaccharide
binding" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0006636 "unsaturated fatty
acid biosynthetic process" evidence=RCA] [GO:0009595 "detection of
biotic stimulus" evidence=RCA] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0010218 "response to
far red light" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA] [GO:0016117
"carotenoid biosynthetic process" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0043085 "positive regulation of
catalytic activity" evidence=RCA] [GO:0043900 "regulation of
multi-organism process" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005773 GO:GO:0045893
GO:GO:0009611 GO:GO:0005777 GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0007623
GO:GO:0000272 GO:GO:0009409 GO:GO:0042742 GO:GO:0009941
GO:GO:0009658 GO:GO:0003723 GO:GO:0005840 GO:GO:0010287
GO:GO:0045727 GO:GO:0019843 GO:GO:0010319 GO:GO:0042631
GO:GO:0006364 HOGENOM:HOG000232785 ProtClustDB:PLN00016
GO:GO:0032544 EMBL:Y10557 EMBL:Y15382 EMBL:AC006416 EMBL:AY070022
EMBL:AF428282 EMBL:AY035050 EMBL:AF325043 EMBL:AY062570
EMBL:AY087609 IPI:IPI00548101 PIR:E86226 PIR:T51863 PIR:T52072
RefSeq:NP_172405.1 UniGene:At.21708 UniGene:At.50307
ProteinModelPortal:Q9SA52 SMR:Q9SA52 STRING:Q9SA52 PaxDb:Q9SA52
PRIDE:Q9SA52 ProMEX:Q9SA52 EnsemblPlants:AT1G09340.1 GeneID:837455
KEGG:ath:AT1G09340 TAIR:At1g09340 InParanoid:Q9SA52 OMA:PTYIYGP
PhylomeDB:Q9SA52 Genevestigator:Q9SA52 GO:GO:0010297 GO:GO:0005996
Uniprot:Q9SA52
Length = 378
Score = 1564 (555.6 bits), Expect = 1.4e-160, P = 1.4e-160
Identities = 286/320 (89%), Positives = 310/320 (96%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298
Query: 241 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 300
+VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358
Query: 301 RKEADFSTDDMILGKKLVLQ 320
RKEADF+TDDMIL KKLVLQ
Sbjct: 359 RKEADFTTDDMILSKKLVLQ 378
>TAIR|locus:2099222 [details] [associations]
symbol:CSP41A "AT3G63140" species:3702 "Arabidopsis
thaliana" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IGI;RCA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032544 "plastid translation" evidence=IMP]
[GO:0045727 "positive regulation of translation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IMP] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009657 "plastid
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0015979
"photosynthesis" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019684 "photosynthesis,
light reaction" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR016040 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0008266
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
GO:GO:0007623 GO:GO:0009941 GO:GO:0009658 GO:GO:0005840
GO:GO:0009534 GO:GO:0010287 GO:GO:0045727 GO:GO:0019843
GO:GO:0010319 GO:GO:0006364 EMBL:AL163816 EMBL:AF428269
EMBL:AY059887 EMBL:AY128804 IPI:IPI00516646 PIR:T48103
RefSeq:NP_191873.1 UniGene:At.48804 UniGene:At.5159
ProteinModelPortal:Q9LYA9 SMR:Q9LYA9 STRING:Q9LYA9 PaxDb:Q9LYA9
PRIDE:Q9LYA9 ProMEX:Q9LYA9 EnsemblPlants:AT3G63140.1 GeneID:825489
KEGG:ath:AT3G63140 TAIR:At3g63140 HOGENOM:HOG000232785
InParanoid:Q9LYA9 OMA:EYVKIGR PhylomeDB:Q9LYA9 ProtClustDB:PLN00016
Genevestigator:Q9LYA9 GO:GO:0032544 Uniprot:Q9LYA9
Length = 406
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 116/316 (36%), Positives = 171/316 (54%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
GG IG + ++ L+ GH VT+ T G ++++ F+E S + G+ +
Sbjct: 90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
V + + + FDVV D NG++ D V P++D + ++QF++ SSAG+Y ++ PH
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205
Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
E D V + H + E L NW S RP Y+ G N EEWFF R+ R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262
Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFP 237
IPGSG+Q+T + HV+DL+ + N E AS +FN ++ VT DG+A+ CA AAG
Sbjct: 263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-K 321
Query: 238 EPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGR 297
E+VHY+PK KKAF FR+ HF+A AK +LGW+ + +L E L + +
Sbjct: 322 TVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKI 381
Query: 298 GTYRKEADFSTDDMIL 313
G +KE F DD IL
Sbjct: 382 GRDKKEIKFELDDKIL 397
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 157 (60.3 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 85/314 (27%), Positives = 132/314 (42%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVT-L--FTRGKAPIAQQLPGESDQEF--AEFSSKILH--L 54
G FIG L L+ +GH V L F G+A + L S F A+ + LH L
Sbjct: 7 GAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADLHAIL 66
Query: 55 KGDRKDYDF-------VKSSLSAKGFDVVYDING--READEVEPILDALPNLEQFIYCSS 105
+ R + F V+ S++ FD ++ G R A+ + + ++ SS
Sbjct: 67 EQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQT-----GVRKIVHTSS 121
Query: 106 AG-VYLKSDLLPHCETDTVDPKSRHK-GKLNTESVLES----KGVNWTSLRPVYIYGPLN 159
G +Y P ET DP S + GK+ E L + G++ + + P +YGP
Sbjct: 122 GGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGP-R 180
Query: 160 YNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
+P V F L +G+P + G G V D+ AFV+V + + FN
Sbjct: 181 QDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGGGLR-FN 239
Query: 215 ISGEKYVTFDGLARACAKAAGFPE-PELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH 273
I K + L A A A G P+ PE + P+ D K+ + A+
Sbjct: 240 IGTGKETSDRQLHSAVAAAVGGPDDPEF--HPPRLGDL-KRSCL---------DIGLAER 287
Query: 274 VLGWKPEFDLVEGL 287
VLGW+P+ +L +G+
Sbjct: 288 VLGWRPQIELADGV 301
>SGD|S000003979 [details] [associations]
symbol:YLL056C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
SGD:S000003979 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BK006945 GO:GO:0044237
EMBL:Z47973 HOGENOM:HOG000142393 OMA:GFVPRLI OrthoDB:EOG4WM83J
EMBL:Z73161 EMBL:AY558193 PIR:S50964 RefSeq:NP_013044.1
ProteinModelPortal:Q12177 SMR:Q12177 DIP:DIP-8912N IntAct:Q12177
STRING:Q12177 EnsemblFungi:YLL056C GeneID:850670 KEGG:sce:YLL056C
CYGD:YLL056c NextBio:966653 Genevestigator:Q12177
GermOnline:YLL056C Uniprot:Q12177
Length = 298
Score = 129 (50.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 75/310 (24%), Positives = 133/310 (42%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
G + FIG + L+ GH+V R A+ + + ++KIL +GD KD
Sbjct: 7 GASGFIGSAVLSELISSGHEVVGLARSDEAAAKI-------KSIDPAAKIL--RGDLKDL 57
Query: 62 DFVKSSLS-AKG---FDVVYDI-NGREADEVE-----PILDALPNLEQ-FIYCSSAGVYL 110
+ +K + + G V+D N + E++ +L++L + F+Y + + L
Sbjct: 58 EILKKGATESDGVIHLGFVHDFKNFEQCCEIDRQATVAMLESLKGSNKPFLYTNGT-LSL 116
Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVL--ESKGVNWTSLR-PVYIYGPLN--YNPVEE 165
+ + + + E D +D S+ + + L + KGV+ +R P ++G + + P+
Sbjct: 117 RPNKVAN-EQDGIDEDSKILRAVTEQVALSYKDKGVSARIVRLPFSVHGKGDKAFVPI-- 173
Query: 166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG 225
+ KA G G H D A F VL K QV++ GE+ + F
Sbjct: 174 -LMNIAKAAGKSGYVGQGTNAWAAVHRLDTAPLFRLVLEKGKTG-QVYHCVGEQGIPFKD 231
Query: 226 LARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPE-FDLV 284
+AR + P + + E FG F RD S E + LGW+P+ L+
Sbjct: 232 IARVIGEILNVPVAS-IPVDDAESHFGFLTCFVTRDGP--VSSEGTRKELGWQPQQIGLL 288
Query: 285 EGLADSYNLD 294
E + +Y+L+
Sbjct: 289 EDIRANYSLN 298
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 55/201 (27%), Positives = 84/201 (41%)
Query: 96 NLEQFIYCSSAGVYLKS------DLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL 149
N+E+F+Y S+ VY S + P C T+ S+ + +S E
Sbjct: 138 NVEKFVYVSTDEVYGGSTDQEFDESSPKCPTNPY-ASSKAAAECFVQSYWERYQFPVVIT 196
Query: 150 RPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
R +YGP Y V F L+ R I GSG+Q + D+ AF+ VL K
Sbjct: 197 RSSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKP 256
Query: 209 SRQVFNISGEKYVTFDGLARACAKAAG--FPEPELVHYNPKEFDFGKKKAFPFRDQHFFA 266
+++NI ++ LA+ E E+ H+ D+ K + P D +
Sbjct: 257 G-EIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHW----MDYVKDR--PTNDLRYPM 309
Query: 267 SVEKAKHVLGWKPEFDLVEGL 287
S EK H LGW+P+ EG+
Sbjct: 310 SSEKM-HNLGWRPKVPWKEGI 329
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 125 (49.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 40/141 (28%), Positives = 62/141 (43%)
Query: 155 YGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
YGP + + H + AG+P+P+ G G V HVKD + A VL K +VF
Sbjct: 194 YGPFQFPEKLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETVLKGGKPG-EVF 252
Query: 214 NISGE-KYVTFDGLARACA---KAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVE 269
N+ G ++ D + C + G P E + F K + D+ + S
Sbjct: 253 NVGGNNEWFNIDIVHLLCDLLDERLGRPGGE----SRGLITFVKDRLG--HDRRYAISAA 306
Query: 270 KAKHVLGWKPEFDLVEGLADS 290
K K LGW+P + G+A++
Sbjct: 307 KIKRELGWEPSYTFERGIAET 327
Score = 39 (18.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 54 LKGDRKDYDFVKSSLSAKGFDVV 76
+KGD D D V+ L+ + D V
Sbjct: 63 VKGDIGDADLVRRILAEERIDAV 85
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 121 (47.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 76/311 (24%), Positives = 129/311 (41%)
Query: 2 GGTRFIGVFLSRLLVKE--GHQVTLFTR----GKAPIAQQLPGESDQEFA--EFSSKILH 53
GG FIG+ +VK+ T + A + L S+ EF + S + +
Sbjct: 13 GGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLSDNLEY 72
Query: 54 L-KGDRKDYDFV----KSSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSS 105
L K + D + +SS+ D VY + +L+ P++ F++ S+
Sbjct: 73 LLKITKNTTDIINFAAESSVDRSFKDPVY-FTKNNILATQNLLECHRLNPSIGYFLHIST 131
Query: 106 AGVY---LKSDLLPHCETDTVDPKSRHKGKLNT--ESVLESKGVNWTSLRPVYIYGPLNY 160
VY + D + + +P S K ++ +S S + T LRP +YGPL Y
Sbjct: 132 DEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILRPNNVYGPLQY 191
Query: 161 -NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV-LGNEKAS-RQVFNISG 217
+ + +PIP+ G G + +V D+ A V + N + Q++NI G
Sbjct: 192 PEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMTTVNQIYNIGG 251
Query: 218 EKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAK-HVLG 276
+ D L+ K E+ + E F K + + D ++ S++ K H LG
Sbjct: 252 TDEL--DNLS--LIKLI----MEI--FGRGEIQFIKDRNY--NDTNY--SIDTTKIHNLG 297
Query: 277 WKPEFDLVEGL 287
W P+ LV+GL
Sbjct: 298 WSPKISLVQGL 308
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 121 (47.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 76/311 (24%), Positives = 129/311 (41%)
Query: 2 GGTRFIGVFLSRLLVKE--GHQVTLFTR----GKAPIAQQLPGESDQEFA--EFSSKILH 53
GG FIG+ +VK+ T + A + L S+ EF + S + +
Sbjct: 13 GGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLSDNLEY 72
Query: 54 L-KGDRKDYDFV----KSSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSS 105
L K + D + +SS+ D VY + +L+ P++ F++ S+
Sbjct: 73 LLKITKNTTDIINFAAESSVDRSFKDPVY-FTKNNILATQNLLECHRLNPSIGYFLHIST 131
Query: 106 AGVY---LKSDLLPHCETDTVDPKSRHKGKLNT--ESVLESKGVNWTSLRPVYIYGPLNY 160
VY + D + + +P S K ++ +S S + T LRP +YGPL Y
Sbjct: 132 DEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILRPNNVYGPLQY 191
Query: 161 -NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV-LGNEKAS-RQVFNISG 217
+ + +PIP+ G G + +V D+ A V + N + Q++NI G
Sbjct: 192 PEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMTTVNQIYNIGG 251
Query: 218 EKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAK-HVLG 276
+ D L+ K E+ + E F K + + D ++ S++ K H LG
Sbjct: 252 TDEL--DNLS--LIKLI----MEI--FGRGEIQFIKDRNY--NDTNY--SIDTTKIHNLG 297
Query: 277 WKPEFDLVEGL 287
W P+ LV+GL
Sbjct: 298 WSPKISLVQGL 308
>TIGR_CMR|GSU_0385 [details] [associations]
symbol:GSU_0385 "NADH dehydrogenase subunit, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003954 "NADH
dehydrogenase activity" evidence=ISS] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=ISS]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE017180
GenomeReviews:AE017180_GR KO:K00356 HOGENOM:HOG000168008 KO:K00329
OMA:VKRFIHM RefSeq:NP_951444.1 ProteinModelPortal:Q74G63
GeneID:2686648 KEGG:gsu:GSU0385 PATRIC:22023514
ProtClustDB:CLSK827793 BioCyc:GSUL243231:GH27-410-MONOMER
Uniprot:Q74G63
Length = 294
Score = 104 (41.7 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 28/108 (25%), Positives = 46/108 (42%)
Query: 129 HKGKLNTESVLESKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVT 187
H+ K E V+ ++WT RP I+GP + + F R A +P+ G G
Sbjct: 122 HRTKWRAEEVVRQSELDWTIFRPSLIFGPKGAFVDMLAGFVRRFPA---VPVVGDGTYRL 178
Query: 188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
Q V D+AR F L + Q + + G +T++ + + G
Sbjct: 179 QPVSVDDVARCFALALDMPETFGQTYELCGPDRLTYNEVLDIIGRVLG 226
Score = 55 (24.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKA 30
GGT F+G + R L++ GH + L ++
Sbjct: 7 GGTGFVGGHVRRALLERGHSLRLLVHQRS 35
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 122 (48.0 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 73/331 (22%), Positives = 138/331 (41%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGD 57
GG F+G L+ L+ +GH+VT+ F G+ + G + E + L+++ D
Sbjct: 72 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVD 131
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH 117
+ + +S ++ + + + + A + + S++ VY ++ P
Sbjct: 132 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ 191
Query: 118 CE-----TDTVDPKSRH-KGKLNTESV----LESKGVNWTSLRPVYIYGP---LNYNPVE 164
E + V P++ + +GK E++ ++ +GV R +GP +N V
Sbjct: 192 TEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVV 251
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224
F + G P+ + GSG Q +V DL V ++ N S V N+ + T
Sbjct: 252 SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPV-NLGNPEEHTIL 309
Query: 225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV 284
A+ G E+ + + D K+K P ++KAK +LGW+P L
Sbjct: 310 EFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK--P--------DIKKAKLMLGWEPVVPLE 358
Query: 285 EGLADSYNLDFGRGTYRKEADFSTDDMILGK 315
EGL + + +RKE ++ ++ + K
Sbjct: 359 EGLNKAIHY------FRKELEYQANNQYIPK 383
>TAIR|locus:2025192 [details] [associations]
symbol:AT1G75280 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=IGI;IEP]
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005737 GO:GO:0046686 GO:GO:0006979
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491 EMBL:AC025814
EMBL:Z49777 EMBL:AY065395 EMBL:AY117175 EMBL:AY084851
IPI:IPI00517618 PIR:C96783 PIR:S57613 RefSeq:NP_565107.1
UniGene:At.18297 ProteinModelPortal:P52577 SMR:P52577 STRING:P52577
PaxDb:P52577 PRIDE:P52577 ProMEX:P52577 EnsemblPlants:AT1G75280.1
GeneID:843865 KEGG:ath:AT1G75280 TAIR:At1g75280 eggNOG:NOG126691
HOGENOM:HOG000237415 InParanoid:P52577 KO:K00224 OMA:VLSINHA
PhylomeDB:P52577 ProtClustDB:CLSN2682501 Genevestigator:P52577
GermOnline:AT1G75280 InterPro:IPR008030 Pfam:PF05368 Uniprot:P52577
Length = 310
Score = 120 (47.3 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 44/153 (28%), Positives = 75/153 (49%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT +IG FL K GH R +A ++ + G++ Q F + ILH GD D
Sbjct: 11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
++ + ++ K DVV G + D+ + I+ A+ N+++F+ S GV +
Sbjct: 68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119
Query: 116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWT 147
T V+P KS GK+ +E++G+ +T
Sbjct: 120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 72/331 (21%), Positives = 138/331 (41%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGD 57
GG F+G L+ L+ +GH+VT+ F G+ + G + E + L+++ D
Sbjct: 38 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVD 97
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH 117
+ + +S ++ + + + + A + + S++ VY ++ P
Sbjct: 98 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ 157
Query: 118 CE-----TDTVDPKSRH-KGKLNTESV----LESKGVNWTSLRPVYIYGP---LNYNPVE 164
E + + P++ + +GK E++ ++ +GV R +GP +N V
Sbjct: 158 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVV 217
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224
F + G P+ + GSG Q +V DL V ++ N S V N+ + T
Sbjct: 218 SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPV-NLGNPEEHTIL 275
Query: 225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV 284
A+ G E+ + + D K+K P ++KAK +LGW+P L
Sbjct: 276 EFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK--P--------DIKKAKLMLGWEPVVPLE 324
Query: 285 EGLADSYNLDFGRGTYRKEADFSTDDMILGK 315
EGL + + +RKE ++ ++ + K
Sbjct: 325 EGLNKAIHY------FRKELEYQANNQYIPK 349
>UNIPROTKB|Q83DM2 [details] [associations]
symbol:CBU_0681 "NAD dependent epimerase/dehydratase
family" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 52/181 (28%), Positives = 78/181 (43%)
Query: 97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
++Q IY SS VY SD P ET P S H ++ +SV ++ LRP
Sbjct: 101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159
Query: 152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
+YG P N Y P F RL I + G G + ++ D+A +V+ +
Sbjct: 160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214
Query: 207 KASRQVFNISGEKYVTFDGLARACAKAAGF-----PEPE---LVHYNPKEFDFGK-KKAF 257
+ SR V NI+ + ++F LA + + P P + H + FD +KAF
Sbjct: 215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAF 274
Query: 258 P 258
P
Sbjct: 275 P 275
>TIGR_CMR|CBU_0681 [details] [associations]
symbol:CBU_0681 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 52/181 (28%), Positives = 78/181 (43%)
Query: 97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
++Q IY SS VY SD P ET P S H ++ +SV ++ LRP
Sbjct: 101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159
Query: 152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
+YG P N Y P F RL I + G G + ++ D+A +V+ +
Sbjct: 160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214
Query: 207 KASRQVFNISGEKYVTFDGLARACAKAAGF-----PEPE---LVHYNPKEFDFGK-KKAF 257
+ SR V NI+ + ++F LA + + P P + H + FD +KAF
Sbjct: 215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAF 274
Query: 258 P 258
P
Sbjct: 275 P 275
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 72/331 (21%), Positives = 138/331 (41%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGD 57
GG F+G L+ L+ +GH+VT+ F G+ + G + E + L+++ D
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVD 154
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH 117
+ + +S ++ + + + + A + + S++ VY ++ P
Sbjct: 155 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ 214
Query: 118 CE-----TDTVDPKSRH-KGKLNTESV----LESKGVNWTSLRPVYIYGP---LNYNPVE 164
E + + P++ + +GK E++ ++ +GV R +GP +N V
Sbjct: 215 TEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVV 274
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224
F + G P+ + GSG Q +V DL V ++ N S V N+ + T
Sbjct: 275 SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPV-NLGNPEEHTIL 332
Query: 225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV 284
A+ G E+ + + D K+K P ++KAK +LGW+P L
Sbjct: 333 EFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK--P--------DIKKAKLMLGWEPVVPLE 381
Query: 285 EGLADSYNLDFGRGTYRKEADFSTDDMILGK 315
EGL + + +RKE ++ ++ + K
Sbjct: 382 EGLNKAIHY------FRKELEYQANNQYIPK 406
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 72/331 (21%), Positives = 138/331 (41%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGD 57
GG F+G L+ L+ +GH+VT+ F G+ + G + E + L+++ D
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVD 154
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH 117
+ + +S ++ + + + + A + + S++ VY ++ P
Sbjct: 155 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ 214
Query: 118 CE-----TDTVDPKSRH-KGKLNTESV----LESKGVNWTSLRPVYIYGP---LNYNPVE 164
E + + P++ + +GK E++ ++ +GV R +GP +N V
Sbjct: 215 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVV 274
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224
F + G P+ + GSG Q +V DL V ++ N S V N+ + T
Sbjct: 275 SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPV-NLGNPEEHTIL 332
Query: 225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV 284
A+ G E+ + + D K+K P ++KAK +LGW+P L
Sbjct: 333 EFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK--P--------DIKKAKLMLGWEPVVPLE 381
Query: 285 EGLADSYNLDFGRGTYRKEADFSTDDMILGK 315
EGL + + +RKE ++ ++ + K
Sbjct: 382 EGLNKAIHY------FRKELEYQANNQYIPK 406
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 72/331 (21%), Positives = 138/331 (41%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGD 57
GG F+G L+ L+ +GH+VT+ F G+ + G + E + L+++ D
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVD 154
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH 117
+ + +S ++ + + + + A + + S++ VY ++ P
Sbjct: 155 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ 214
Query: 118 CE-----TDTVDPKSRH-KGKLNTESV----LESKGVNWTSLRPVYIYGP---LNYNPVE 164
E + + P++ + +GK E++ ++ +GV R +GP +N V
Sbjct: 215 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVV 274
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224
F + G P+ + GSG Q +V DL V ++ N S V N+ + T
Sbjct: 275 SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPV-NLGNPEEHTIL 332
Query: 225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV 284
A+ G E+ + + D K+K P ++KAK +LGW+P L
Sbjct: 333 EFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK--P--------DIKKAKLMLGWEPVVPLE 381
Query: 285 EGLADSYNLDFGRGTYRKEADFSTDDMILGK 315
EGL + + +RKE ++ ++ + K
Sbjct: 382 EGLNKAIHY------FRKELEYQANNQYIPK 406
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 72/331 (21%), Positives = 138/331 (41%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGD 57
GG F+G L+ L+ +GH+VT+ F G+ + G + E + L+++ D
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVD 154
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH 117
+ + +S ++ + + + + A + + S++ VY ++ P
Sbjct: 155 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ 214
Query: 118 CE-----TDTVDPKSRH-KGKLNTESV----LESKGVNWTSLRPVYIYGP---LNYNPVE 164
E + + P++ + +GK E++ ++ +GV R +GP +N V
Sbjct: 215 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVV 274
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224
F + G P+ + GSG Q +V DL V ++ N S V N+ + T
Sbjct: 275 SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPV-NLGNPEEHTIL 332
Query: 225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV 284
A+ G E+ + + D K+K P ++KAK +LGW+P L
Sbjct: 333 EFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK--P--------DIKKAKLMLGWEPVVPLE 381
Query: 285 EGLADSYNLDFGRGTYRKEADFSTDDMILGK 315
EGL + + +RKE ++ ++ + K
Sbjct: 382 EGLNKAIHY------FRKELEYQANNQYIPK 406
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 72/331 (21%), Positives = 138/331 (41%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGD 57
GG F+G L+ L+ +GH+VT+ F G+ + G + E + L+++ D
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVD 154
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH 117
+ + +S ++ + + + + A + + S++ VY ++ P
Sbjct: 155 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ 214
Query: 118 CE-----TDTVDPKSRH-KGKLNTESV----LESKGVNWTSLRPVYIYGP---LNYNPVE 164
E + + P++ + +GK E++ ++ +GV R +GP +N V
Sbjct: 215 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVV 274
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224
F + G P+ + GSG Q +V DL V ++ N S V N+ + T
Sbjct: 275 SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPV-NLGNPEEHTIL 332
Query: 225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV 284
A+ G E+ + + D K+K P ++KAK +LGW+P L
Sbjct: 333 EFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK--P--------DIKKAKLMLGWEPVVPLE 381
Query: 285 EGLADSYNLDFGRGTYRKEADFSTDDMILGK 315
EGL + + +RKE ++ ++ + K
Sbjct: 382 EGLNKAIHY------FRKELEYQANNQYIPK 406
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 114 (45.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 72 GFDVVYDIN--GREADEVEPILDALPNLEQFIYCSSAGVYLKS-DLLPHCET----DT-V 123
G+D+ Y +N G E +E + ++Q +Y SS+ V D++ ET D +
Sbjct: 78 GYDIYYSVNVIGTER-LIEACIKC--GVKQLVYTSSSSVVFNGKDIVNGDETLPYVDKHI 134
Query: 124 DPKSRHKGKLNTESVLESKGVNWT--SLRPVYIYGPLNYNPVEEW--FFHRLKAGRPIPI 179
DP ++ K +L +VL++KG N +LRP I+GP V+ W F K G+ +
Sbjct: 135 DPYNKTK-ELGERAVLKAKGSNLLVCALRPAGIFGP---REVQGWPQFLKAAKEGKNKFM 190
Query: 180 PGSGIQVTQLGHVKDLARAFV----QVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
G G + ++ ++ A + + N S V+ I+ ++ + F + +A G
Sbjct: 191 FGDGNNLCDWTYIDNVVHAHILAADNMTTNSPISGSVYFITNDEPIPFWDMPIFAYEAFG 250
Query: 236 FPEPEL 241
+ P++
Sbjct: 251 YERPKM 256
Score = 44 (20.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 265 FASVEKAKHVLGWKPEFDLVEGL 287
+ ++EKAK L +KP L +G+
Sbjct: 300 YFNIEKAKKELKYKPIVSLRDGM 322
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 51/200 (25%), Positives = 89/200 (44%)
Query: 97 LEQFIYCSSAGVYLKSD---LLPHCETDTVDPKSRHKG-KLNTESVL----ESKGVNWTS 148
+ +FI+ S+ VY ++D + + E + P + + K E ++ S G+ +
Sbjct: 126 IRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 185
Query: 149 LRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK 207
R +YGP + + F +G+P+PI G G V + +D+A AF VL +
Sbjct: 186 TRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 245
Query: 208 ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFAS 267
V+N+ ++ +AR K G +PE F + + PF DQ +F
Sbjct: 246 IGH-VYNVGTKRERRVIDVARDICKLFG-KDPE------SSIQFVENR--PFNDQRYFLD 295
Query: 268 VEKAKHVLGWKPEFDLVEGL 287
+K K LGW+ + +GL
Sbjct: 296 DQKLKK-LGWQERTNWEDGL 314
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 72/331 (21%), Positives = 137/331 (41%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGD 57
GG F+G L+ L+ +GH+VT+ F G+ + G + E + L+++ D
Sbjct: 96 GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVD 155
Query: 58 RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH 117
+ + +S ++ + + + + A + + S++ VY ++ P
Sbjct: 156 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ 215
Query: 118 CE-----TDTVDPKSRH-KGKLNTESV----LESKGVNWTSLRPVYIYGP---LNYNPVE 164
E + + P++ + +GK E++ ++ +GV R +GP +N V
Sbjct: 216 NEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVV 275
Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD 224
F + G P+ + G G Q +V DL V ++ N S V N+ + T
Sbjct: 276 SNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALM-NSNVSSPV-NLGNPEEHTIL 333
Query: 225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLV 284
A+ K G E+ + + D K+K P + KAK +LGW+P L
Sbjct: 334 EFAQLIKKLVGSGS-EIQFLSEAQDDPQKRK--P--------DIRKAKLLLGWEPVVPLE 382
Query: 285 EGLADSYNLDFGRGTYRKEADFSTDDMILGK 315
EGL + + +RKE ++ ++ + K
Sbjct: 383 EGLNKAIHY------FRKELEYQANNQYIPK 407
>UNIPROTKB|Q71YS4 [details] [associations]
symbol:LMOf2365_1769 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE017262 GenomeReviews:AE017262_GR
RefSeq:YP_014363.1 ProteinModelPortal:Q71YS4 STRING:Q71YS4
GeneID:2799575 KEGG:lmf:LMOf2365_1769 PATRIC:20324823
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
Uniprot:Q71YS4
Length = 291
Score = 115 (45.5 bits), Expect = 0.00032, P = 0.00032
Identities = 68/270 (25%), Positives = 115/270 (42%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGTRF G L LV EGH+VT+ TRGK ++ F + +++ L + +D
Sbjct: 7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY-------LKSD 113
F L+ + +DV+YD E +DA ++++IY SS VY +++D
Sbjct: 56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYSQKGRALVEAD 112
Query: 114 LLP-HCETDTVDPKSRH--KGKLNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFH 169
P H E D + +GK E+V K ++R + G +Y + +
Sbjct: 113 FNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGLDDYTKRLHFHIN 172
Query: 170 RLKAGRPIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
+K + I I S Q ++G + D A F++ +G E N + +G +
Sbjct: 173 HIKNHQEIGI--SNGQA-EIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIK 229
Query: 229 ACAKAAG-FPEPELVHYNPKEFDFGKKKAF 257
+ G E V + + FG +K +
Sbjct: 230 MLEEKIGKLALVEEVTDDVDDSPFGIEKTY 259
>UNIPROTKB|Q81JK7 [details] [associations]
symbol:BA_5697 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
RefSeq:NP_847843.1 RefSeq:YP_022381.1 ProteinModelPortal:Q81JK7
DNASU:1085440 EnsemblBacteria:EBBACT00000011484
EnsemblBacteria:EBBACT00000015136 GeneID:1085440 GeneID:2817090
KEGG:ban:BA_5697 KEGG:bar:GBAA_5697 PATRIC:18789026
BioCyc:BANT261594:GJ7F-5550-MONOMER Uniprot:Q81JK7
Length = 292
Score = 115 (45.5 bits), Expect = 0.00032, P = 0.00032
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
>TIGR_CMR|BA_5697 [details] [associations]
symbol:BA_5697 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
RefSeq:NP_847843.1 RefSeq:YP_022381.1 ProteinModelPortal:Q81JK7
DNASU:1085440 EnsemblBacteria:EBBACT00000011484
EnsemblBacteria:EBBACT00000015136 GeneID:1085440 GeneID:2817090
KEGG:ban:BA_5697 KEGG:bar:GBAA_5697 PATRIC:18789026
BioCyc:BANT261594:GJ7F-5550-MONOMER Uniprot:Q81JK7
Length = 292
Score = 115 (45.5 bits), Expect = 0.00032, P = 0.00032
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
>TAIR|locus:2025197 [details] [associations]
symbol:AT1G75290 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016651 "oxidoreductase activity,
acting on NAD(P)H" evidence=ISS] InterPro:IPR016040 EMBL:CP002684
GO:GO:0000166 Gene3D:3.40.50.720 eggNOG:COG0702
ProtClustDB:CLSN2682501 InterPro:IPR008030 Pfam:PF05368
EMBL:BT033106 IPI:IPI00521965 RefSeq:NP_177664.4 UniGene:At.52521
ProteinModelPortal:B3LFB7 SMR:B3LFB7 PaxDb:B3LFB7 PRIDE:B3LFB7
EnsemblPlants:AT1G75290.1 GeneID:843866 KEGG:ath:AT1G75290
TAIR:At1g75290 OMA:IDEYLSY PhylomeDB:B3LFB7 ArrayExpress:B3LFB7
Genevestigator:B3LFB7 Uniprot:B3LFB7
Length = 318
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT IG + VK GH R +A ++ G++ Q F +F +LH GD D
Sbjct: 11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDL-LPHCE 119
++ + ++ K DVV G ILD + + +L S+ + +
Sbjct: 68 HESLVKAI--KQADVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120
Query: 120 TDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
+ V+P KS KL T +E++G+ +T L Y G Y P +L+ G P
Sbjct: 121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP 174
Query: 179 IPGSGIQVTQLGHVK 193
P +++ G+VK
Sbjct: 175 -PRDKVKIFGDGNVK 188
>UNIPROTKB|Q749U5 [details] [associations]
symbol:GSU2647 "NAD-dependent nucleoside diphosphate-sugar
epimerase/dehydratase" species:243231 "Geobacter sulfurreducens
PCA" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000240103
OMA:FMSESRR RefSeq:NP_953692.1 ProteinModelPortal:Q749U5
DNASU:2687671 GeneID:2687671 KEGG:gsu:GSU2647 PATRIC:22028149
ProtClustDB:CLSK828929 BioCyc:GSUL243231:GH27-2660-MONOMER
Uniprot:Q749U5
Length = 289
Score = 111 (44.1 bits), Expect = 0.00090, P = 0.00090
Identities = 48/165 (29%), Positives = 73/165 (44%)
Query: 87 VEPILDAL-PNLE--QFIYCSSAGVY--LKSDLLPHCETDTVDPKSRHKGKLNTESVLES 141
V DA+ P E + +Y S++GVY D++ ET SR + + + E+V
Sbjct: 84 VRAFCDAIAPGEEPRKIVYLSTSGVYGDCGGDVVTE-ETPPNPQTSRARRRYDAETVFRQ 142
Query: 142 ----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197
+GV LR IYGP P+++ L +G+P+ + S T H +DLAR
Sbjct: 143 WGAERGVPVVILRVTGIYGPGRL-PLQQ-----LTSGQPV-LEESLAPFTNRIHSEDLAR 195
Query: 198 AFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELV 242
+ + + +FN+S T ACA A G P P V
Sbjct: 196 ICLAAAEHGEDG-DIFNVSDGHPTTMTAYFDACADALGLPRPRRV 239
>TIGR_CMR|GSU_2647 [details] [associations]
symbol:GSU_2647 "conserved hypothetical protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000240103 OMA:FMSESRR
RefSeq:NP_953692.1 ProteinModelPortal:Q749U5 DNASU:2687671
GeneID:2687671 KEGG:gsu:GSU2647 PATRIC:22028149
ProtClustDB:CLSK828929 BioCyc:GSUL243231:GH27-2660-MONOMER
Uniprot:Q749U5
Length = 289
Score = 111 (44.1 bits), Expect = 0.00090, P = 0.00090
Identities = 48/165 (29%), Positives = 73/165 (44%)
Query: 87 VEPILDAL-PNLE--QFIYCSSAGVY--LKSDLLPHCETDTVDPKSRHKGKLNTESVLES 141
V DA+ P E + +Y S++GVY D++ ET SR + + + E+V
Sbjct: 84 VRAFCDAIAPGEEPRKIVYLSTSGVYGDCGGDVVTE-ETPPNPQTSRARRRYDAETVFRQ 142
Query: 142 ----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR 197
+GV LR IYGP P+++ L +G+P+ + S T H +DLAR
Sbjct: 143 WGAERGVPVVILRVTGIYGPGRL-PLQQ-----LTSGQPV-LEESLAPFTNRIHSEDLAR 195
Query: 198 AFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELV 242
+ + + +FN+S T ACA A G P P V
Sbjct: 196 ICLAAAEHGEDG-DIFNVSDGHPTTMTAYFDACADALGLPRPRRV 239
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.139 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 321 321 0.00085 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 606 (64 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.49u 0.09s 25.58t Elapsed: 00:00:01
Total cpu time: 25.50u 0.09s 25.59t Elapsed: 00:00:01
Start: Fri May 10 09:00:48 2013 End: Fri May 10 09:00:49 2013