Your job contains 1 sequence.
>020798
MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDS
TPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC
VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGL
CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG
HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN
IIASGALDNDRTVKIWTQEKE
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020798
(321 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 1238 4.8e-126 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 1105 5.9e-112 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 1105 5.9e-112 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 1105 5.9e-112 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 1105 5.9e-112 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 1104 7.6e-112 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 1104 7.6e-112 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 1104 7.6e-112 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 1097 4.2e-111 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 1012 4.2e-102 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 992 5.6e-100 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 976 2.8e-98 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 976 2.8e-98 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 971 9.4e-98 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 961 1.1e-96 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 680 6.5e-67 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 513 1.8e-52 2
UNIPROTKB|G4MKJ2 - symbol:MGG_04473 "WD repeat containing... 440 2.0e-52 3
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 506 3.6e-47 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 455 1.7e-41 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 414 9.9e-39 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 410 2.6e-38 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 407 5.5e-38 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 401 3.8e-37 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 396 8.9e-37 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 395 1.3e-36 1
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 330 4.4e-36 2
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 382 2.4e-35 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 382 2.4e-35 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 348 1.7e-34 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 374 1.7e-34 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 373 2.2e-34 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 369 5.8e-34 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 372 6.9e-34 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 372 7.0e-34 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 367 9.5e-34 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 372 1.0e-33 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 372 1.0e-33 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 344 1.1e-33 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 344 1.1e-33 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 374 1.3e-33 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 369 1.4e-33 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 365 1.5e-33 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 372 1.7e-33 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 372 1.7e-33 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 362 3.2e-33 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 366 4.0e-33 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 360 5.2e-33 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 361 6.4e-33 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 358 8.5e-33 1
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 357 1.1e-32 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 358 1.1e-32 1
SGD|S000000379 - symbol:SWD3 "Essential subunit of the CO... 356 1.4e-32 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 356 1.4e-32 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 354 2.3e-32 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 354 2.3e-32 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 354 2.3e-32 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 354 2.3e-32 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 354 2.3e-32 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 354 2.3e-32 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 354 2.3e-32 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 354 2.3e-32 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 354 2.3e-32 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 354 2.3e-32 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 363 2.3e-32 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 363 2.3e-32 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 353 2.9e-32 1
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 224 3.4e-32 2
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 361 3.8e-32 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 361 3.8e-32 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 361 3.8e-32 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 359 4.2e-32 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 351 4.7e-32 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 351 4.7e-32 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 350 6.0e-32 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 350 6.0e-32 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 355 9.2e-32 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 355 9.2e-32 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 355 9.2e-32 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 355 9.4e-32 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 348 9.8e-32 1
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 348 1.1e-31 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 354 1.2e-31 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 337 1.5e-31 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 346 1.6e-31 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 344 2.6e-31 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 344 2.6e-31 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 343 3.3e-31 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 348 3.4e-31 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 348 3.4e-31 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 331 4.0e-31 2
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 345 5.3e-31 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 350 5.5e-31 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 354 5.7e-31 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 340 6.9e-31 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 340 6.9e-31 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 340 6.9e-31 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 345 8.9e-31 1
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 344 9.5e-31 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 347 1.1e-30 1
WARNING: Descriptions of 1986 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 230/313 (73%), Positives = 267/313 (85%)
Query: 9 SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK 68
SF PY +QTL H RA+SSVKFS DGRLLAS+SADK +Q+
Sbjct: 10 SFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEP---VQE 66
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
FTGHE G+SD+ FSSD+RF+VSASDDKT++LWDV T + +KTLIGHTNY FCVNFNPQSN
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN 126
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
MIVSG+FDETVRIWDV TGKCLKVLPAHSDPVTAVDFNRDG++IV+SSYDGLCRIWD+ T
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
GHC+KTLIDDENPPVSFV+FSPNGKFILVGTLDNTLRLWN S+ K LKTYTGH N++YCI
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI 246
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
SS FSVTNGK IVSGSED+CV++WEL S+K++QKLEGHT+ V++VA HPTEN+IASG+LD
Sbjct: 247 SSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLD 306
Query: 309 NDRTVKIWTQEKE 321
+TV+IWTQ+KE
Sbjct: 307 --KTVRIWTQKKE 317
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 208/320 (65%), Positives = 253/320 (79%)
Query: 2 SSDQSLES-FRP-YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+ QS + +P Y L TL GH +A+SSVKFS +G LASSSADK
Sbjct: 22 SATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE- 80
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
+ +GH+ G+SD+ +SSDS LVSASDDKT+++WDV + CLKTL GH+NYVF
Sbjct: 81 -------KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF 133
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
C NFNPQSN+IVSG+FDE+VRIWDVKTGKCLK LPAHSDPV+AV FNRDG++IV+SSYDG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
LCRIWD ++G C+KTLIDD+NPPVSFVKFSPNGK+IL TLDNTL+LW+YS GK LKTYT
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH N KYCI + FSVT GK+IVSGSED+ VY+W LQ++++VQKL+GHTD VIS A HPTE
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 300 NIIASGALDNDRTVKIWTQE 319
NIIAS AL+ND+T+K+W +
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 208/320 (65%), Positives = 253/320 (79%)
Query: 2 SSDQSLES-FRP-YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+ QS + +P Y L TL GH +A+SSVKFS +G LASSSADK
Sbjct: 22 SATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE- 80
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
+ +GH+ G+SD+ +SSDS LVSASDDKT+++WDV + CLKTL GH+NYVF
Sbjct: 81 -------KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF 133
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
C NFNPQSN+IVSG+FDE+VRIWDVKTGKCLK LPAHSDPV+AV FNRDG++IV+SSYDG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
LCRIWD ++G C+KTLIDD+NPPVSFVKFSPNGK+IL TLDNTL+LW+YS GK LKTYT
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH N KYCI + FSVT GK+IVSGSED+ VY+W LQ++++VQKL+GHTD VIS A HPTE
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 300 NIIASGALDNDRTVKIWTQE 319
NIIAS AL+ND+T+K+W +
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 208/320 (65%), Positives = 253/320 (79%)
Query: 2 SSDQSLES-FRP-YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+ QS + +P Y L TL GH +A+SSVKFS +G LASSSADK
Sbjct: 22 SATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE- 80
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
+ +GH+ G+SD+ +SSDS LVSASDDKT+++WDV + CLKTL GH+NYVF
Sbjct: 81 -------KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF 133
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
C NFNPQSN+IVSG+FDE+VRIWDVKTGKCLK LPAHSDPV+AV FNRDG++IV+SSYDG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
LCRIWD ++G C+KTLIDD+NPPVSFVKFSPNGK+IL TLDNTL+LW+YS GK LKTYT
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH N KYCI + FSVT GK+IVSGSED+ VY+W LQ++++VQKL+GHTD VIS A HPTE
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 300 NIIASGALDNDRTVKIWTQE 319
NIIAS AL+ND+T+K+W +
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 208/320 (65%), Positives = 253/320 (79%)
Query: 2 SSDQSLES-FRP-YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+ QS + +P Y L TL GH +A+SSVKFS +G LASSSADK
Sbjct: 22 SATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE- 80
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
+ +GH+ G+SD+ +SSDS LVSASDDKT+++WDV + CLKTL GH+NYVF
Sbjct: 81 -------KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF 133
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
C NFNPQSN+IVSG+FDE+VRIWDVKTGKCLK LPAHSDPV+AV FNRDG++IV+SSYDG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
LCRIWD ++G C+KTLIDD+NPPVSFVKFSPNGK+IL TLDNTL+LW+YS GK LKTYT
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH N KYCI + FSVT GK+IVSGSED+ VY+W LQ++++VQKL+GHTD VIS A HPTE
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 300 NIIASGALDNDRTVKIWTQE 319
NIIAS AL+ND+T+K+W +
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 204/307 (66%), Positives = 246/307 (80%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
Y L TL GH +A+SSVKFS +G LASSSADK + +GH
Sbjct: 9 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--------KTISGH 60
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
+ G+SD+ +SSDS LVSASDDKT+++WDV + CLKTL GH+NYVFC NFNPQSN+IVS
Sbjct: 61 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 120
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
G+FDE+VRIWDVKTGKCLK LPAHSDPV+AV FNRDG++IV+SSYDGLCRIWD ++G C+
Sbjct: 121 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 180
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
KTLIDD+NPPVSFVKFSPNGK+IL TLDNTL+LW+YS GK LKTYTGH N KYCI + F
Sbjct: 181 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 240
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
SVT GK+IVSGSED+ VY+W LQ++++VQKL+GHTD VIS A HPTENIIAS AL+ND+T
Sbjct: 241 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 300
Query: 313 VKIWTQE 319
+K+W +
Sbjct: 301 IKLWKSD 307
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 204/307 (66%), Positives = 246/307 (80%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
Y L TL GH +A+SSVKFS +G LASSSADK + +GH
Sbjct: 35 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--------KTISGH 86
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
+ G+SD+ +SSDS LVSASDDKT+++WDV + CLKTL GH+NYVFC NFNPQSN+IVS
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
G+FDE+VRIWDVKTGKCLK LPAHSDPV+AV FNRDG++IV+SSYDGLCRIWD ++G C+
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
KTLIDD+NPPVSFVKFSPNGK+IL TLDNTL+LW+YS GK LKTYTGH N KYCI + F
Sbjct: 207 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 266
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
SVT GK+IVSGSED+ VY+W LQ++++VQKL+GHTD VIS A HPTENIIAS AL+ND+T
Sbjct: 267 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 313 VKIWTQE 319
+K+W +
Sbjct: 327 IKLWKSD 333
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 209/320 (65%), Positives = 254/320 (79%)
Query: 2 SSDQSLES-FRP-YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S++QS + +P YTL TL GH +A+SSVKFS +G LASSSADK
Sbjct: 22 SNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE- 80
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
+ +GH+ G+SD+ +SSDS LVSASDDKT+++WDV + CLKTL GH+NYVF
Sbjct: 81 -------KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF 133
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
C NFNPQSN+IVSG+FDE+VRIWDVKTGKCLK LPAHSDPV+AV FNRDG++IV+SSYDG
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
LCRIWD ++G C+KTLIDD+NPPVSFVKFSPNGK+IL TLDNTL+LW+YS GK LKTYT
Sbjct: 194 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
H N KYCI + FSVT GK+IVSGSED+ VY+W LQ+++VVQKL+GHTD VIS A HPTE
Sbjct: 254 CHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTE 313
Query: 300 NIIASGALDNDRTVKIWTQE 319
NIIAS AL+ND+T+K+W +
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 1097 (391.2 bits), Expect = 4.2e-111, P = 4.2e-111
Identities = 205/319 (64%), Positives = 253/319 (79%)
Query: 2 SSDQSLESFRP-YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
+S++S S +P YTL TL GH +A+S+VKFS +G LASSSADK
Sbjct: 50 ASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE-- 107
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC 120
+ +GH+ G+SD+ +SSDSR LVS SDDKT+++W++ T LKTL GH+NYVFC
Sbjct: 108 ------KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFC 161
Query: 121 VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGL 180
NFNPQSN+IVSG+FDE+VRIWDV+TGKCLK LPAHSDPV+AV FNRDG++IV+SSYDGL
Sbjct: 162 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 221
Query: 181 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240
CRIWD ++G C+KTLIDD+NPPVSFVKFSPNGK+IL TLDNTL+LW+YS GK LKTYTG
Sbjct: 222 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG 281
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN 300
H N KYCI + FSVT GK+IVSGSED+ VY+W LQS++VVQKL+GHTD V+ A HPTEN
Sbjct: 282 HKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTEN 341
Query: 301 IIASGALDNDRTVKIWTQE 319
IIAS AL+ND+T+K+W +
Sbjct: 342 IIASAALENDKTIKLWKSD 360
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
Identities = 185/311 (59%), Positives = 238/311 (76%)
Query: 10 FRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKF 69
++PY +TL GH AIS VKFS+DG LLAS+S DK + ++
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSL--------IHRY 81
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA-TCLKTLIGHTNYVFCVNFNPQSN 128
GH G+SDL +SSDS + SASDD T+R+WD + CLK L GHTN+VFCVNFNP SN
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+IVSG+FDET+RIW+VKTGKC++++ AHS P+++V FNRDG++IV++S+DG C+IWDA
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C+KTLIDD++P VSF KFSPNGKFILV TLD+TL+L NY+TGK LK YTGHTN +CI
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCI 261
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S FSVTNGKYIVSGSED+CVYLW+LQ+R ++Q+LEGHTD VISV+ HP +N I+S
Sbjct: 262 TSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNH 321
Query: 309 NDRTVKIWTQE 319
D+T++IW Q+
Sbjct: 322 LDKTIRIWKQD 332
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 184/313 (58%), Positives = 241/313 (76%)
Query: 8 ESFRP-YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
E +P Y L TL GH AISSVKFS +G LASS+AD
Sbjct: 23 EPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCK-------- 74
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+ GH +SD+ +SSDS LVSASDDKT+++WD+ + CLKTL GH+++VFC +FNP
Sbjct: 75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP 134
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
SN+IVSG+FDE+V+IW+VKTGKCLK L AHSDP++AV+FN +G++IV+ SYDGLCRIWDA
Sbjct: 135 SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDA 194
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
++G C++TL D+ NPPVSFVKFSPNGK+IL TLDNTL+LW+YS G+ LKTYTGH N KY
Sbjct: 195 ASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKY 254
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
C+ ++FSVT K++VSGSED+ VY+W LQ++++VQ+L+GHTD VIS A HPT+NIIAS A
Sbjct: 255 CLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAA 314
Query: 307 LDNDRTVKIWTQE 319
L+ND+T+K+W+ +
Sbjct: 315 LENDKTIKVWSSD 327
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 180/307 (58%), Positives = 230/307 (74%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
Y L TL GH ++ISS KFS G+ L +SSADK + TGH
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE--------RTLTGH 128
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
+ GV+D+ +SSDSR +VSASDDKT++++++ T+ KTL GH NYVFC NFNPQS+++VS
Sbjct: 129 KLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVS 188
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
G+FDE+VRIWDVKTG C+K LPAHSDPV+AV FNRDG++I + SYDGL RIWD + G C+
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
KTL+DDENPPV+FVKFSPNGK+IL LD+TL+LW++S GK LK YTGH NSKYCI + F
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANF 308
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
SVT GK+I+SGSED +Y+W LQ+R++VQ LEGHT PV++ HP +NIIASGAL+ D
Sbjct: 309 SVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNK 368
Query: 313 VKIWTQE 319
+ IW +
Sbjct: 369 IHIWRSD 375
Score = 158 (60.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 33/130 (25%), Positives = 69/130 (53%)
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
S + + ++ +S KFSP GK++ + D T+++WN +T TGH K
Sbjct: 74 SANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGH---KL 130
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
++ ++ + +VS S+D + ++E+ + ++ + L+GH + V +P +++ SG+
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 307 LDNDRTVKIW 316
D +V+IW
Sbjct: 191 FDE--SVRIW 198
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 180/307 (58%), Positives = 230/307 (74%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
Y L TL GH ++ISS KFS G+ L +SSADK + TGH
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICE--------RTLTGH 128
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
+ GV+D+ +SSDSR +VSASDDKT++++++ T+ KTL GH NYVFC NFNPQS+++VS
Sbjct: 129 KLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVS 188
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
G+FDE+VRIWDVKTG C+K LPAHSDPV+AV FNRDG++I + SYDGL RIWD + G C+
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
KTL+DDENPPV+FVKFSPNGK+IL LD+TL+LW++S GK LK YTGH NSKYCI + F
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANF 308
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
SVT GK+I+SGSED +Y+W LQ+R++VQ LEGHT PV++ HP +NIIASGAL+ D
Sbjct: 309 SVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNK 368
Query: 313 VKIWTQE 319
+ IW +
Sbjct: 369 IHIWRSD 375
Score = 158 (60.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 33/130 (25%), Positives = 69/130 (53%)
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
S + + ++ +S KFSP GK++ + D T+++WN +T TGH K
Sbjct: 74 SANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGH---KL 130
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
++ ++ + +VS S+D + ++E+ + ++ + L+GH + V +P +++ SG+
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 307 LDNDRTVKIW 316
D +V+IW
Sbjct: 191 FDE--SVRIW 198
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
Identities = 176/307 (57%), Positives = 230/307 (74%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
Y L T+ GH ++IS+VKFS G+ L +SSADK + TGH
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCE--------RTLTGH 120
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
+ GV+D +S+DS+ +V+ASDDKT+++++VPT KTL GHTNYVFC NFNPQS+++VS
Sbjct: 121 KLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVS 180
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
G+FDE+VRIWDV+TG C+K LPAHSDPV+AV FNRDG++I + SYDGL RIWD + G C+
Sbjct: 181 GSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCV 240
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
KTL+DDENPPV+FVKFSPNGK+IL LDNTL+LW++ GK LK Y GH N+KYCI + F
Sbjct: 241 KTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANF 300
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
SVT GK+I+SGSED +Y+W LQ+++VVQ LEGHT VI+ HP +N+IASGAL+ D T
Sbjct: 301 SVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNT 360
Query: 313 VKIWTQE 319
++IW +
Sbjct: 361 IRIWRSD 367
Score = 187 (70.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/165 (30%), Positives = 86/165 (52%)
Query: 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN 211
V PA+ P+TAV + T TS + G+ + + I+ +S VKFSP
Sbjct: 40 VSPANP-PITAVP---EATAPTTSQESTI-----PGAGYKLISTIEGHTKSISAVKFSPC 90
Query: 212 GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
GKF+ + D T+++WN S +T TGH K ++ + K IV+ S+D + +
Sbjct: 91 GKFLGTSSADKTVKIWNMSDLSCERTLTGH---KLGVNDFAWSADSKSIVTASDDKTLKI 147
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+E+ + K+ + L+GHT+ V +P +++ SG+ D +V+IW
Sbjct: 148 YEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDE--SVRIW 190
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 183/313 (58%), Positives = 231/313 (73%)
Query: 5 QSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXX 64
+S+ Y L TL GHL++ISSVKFS DG+ LAS+SADK
Sbjct: 28 ESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE------ 81
Query: 65 XLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
+ GH++G+SD+ +S DS+ + SASDDKTI++WDV + +KTL GH YVF V+FN
Sbjct: 82 --RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFN 139
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
PQSN+IVSG+FDE VRIWDV TG+C K++ AHSDPVT V FNRDGT++V+ SYDG RIW
Sbjct: 140 PQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW 199
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK-ILKTYTGHTN 243
D +TG + T+ ++ VSFVKFSPNGKF+L GTLDNTLRLW+Y+ K LKTYTGH N
Sbjct: 200 DTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKN 259
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
KYCI STFSVT GK+IV+GSED+ +Y++ LQ+R++VQ L GH D V++VA HPTENIIA
Sbjct: 260 EKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIA 319
Query: 304 SGALDNDRTVKIW 316
SGAL+ DR+VKIW
Sbjct: 320 SGALEKDRSVKIW 332
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 234 ILK-TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
ILK T GH S ISS +GK++ S S D + +W K + LEGH + +
Sbjct: 37 ILKYTLKGHLKS---ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISD 93
Query: 293 VASHPTENIIASGALDNDRTVKIWTQE 319
+A +I S + +D+T+KIW E
Sbjct: 94 IAWSQDSKLICSAS--DDKTIKIWDVE 118
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 137/312 (43%), Positives = 193/312 (61%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GHLR +S+V+FS D ++AS AD + F GH G+S
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGAD--------GAVKVWAASTGKLIYTFEGHLAGIST 223
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKT-LIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ +S D + S SDDKTIRLW+V T T IGH NYV+ + F+P+ NM+VSG++DE
Sbjct: 224 ISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDE 283
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
V +WDV++ + +K LPAHSDPV+ +D DGT+I + + DGL RIWD STG C++TL+
Sbjct: 284 AVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVH 343
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV--- 254
++NPPVS VKFSPNGK++L TLD+ +RLW+Y G+ LKTY GH+N KY +S F V
Sbjct: 344 EDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQ 403
Query: 255 -----TNG-KYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN--IIASGA 306
T G + VSGSED + W++ ++KV+Q++E H V+ V + T + S
Sbjct: 404 SIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCG 463
Query: 307 LDNDRTVKIWTQ 318
LD TV++W +
Sbjct: 464 LDG--TVRVWEE 473
Score = 307 (113.1 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 85/272 (31%), Positives = 124/272 (45%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L T GHL IS++ +S DG +AS S DK F GH
Sbjct: 210 LIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPT-------PFIGHHN 262
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V + FS LVS S D+ + LWDV +A +K+L H++ V ++ +I S A
Sbjct: 263 YVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCA 322
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD--PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
D VRIWD TG+CL+ L H D PV++V F+ +G ++ + D R+WD G C+
Sbjct: 323 TDGLVRIWDTSTGQCLRTL-VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCL 381
Query: 193 KTLIDDENPPVS----FVKF-------SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
KT N S F + +P F + G+ D + W+ T K+L+ H
Sbjct: 382 KTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAH 441
Query: 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
+ T S G+++VS D V +WE
Sbjct: 442 DGVVLGVD-TCSTGEGRFMVSCGLDGTVRVWE 472
Score = 266 (98.7 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 64/166 (38%), Positives = 93/166 (56%)
Query: 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN 211
+L H V+AV F+ D +MI + DG ++W ASTG + T + +S + +SP+
Sbjct: 171 LLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTF-EGHLAGISTISWSPD 229
Query: 212 GKFILVGTLDNTLRLWNYSTGKILKT-YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVY 270
G I G+ D T+RLWN TGK T + GH N Y I+ FS G +VSGS D V+
Sbjct: 230 GATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIA--FS-PKGNMLVSGSYDEAVF 286
Query: 271 LWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
LW+++S +V++ L H+DPV + +IAS A D V+IW
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDG--LVRIW 330
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 42/131 (32%), Positives = 65/131 (49%)
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
S + K L+ VS V+FSP+ I G D +++W STGK++ T+ GH
Sbjct: 163 SVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAG-- 220
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV-VQKLEGHTDPVISVASHPTENIIASG 305
IS+ +G I SGS+D + LW + + K GH + V ++A P N++ SG
Sbjct: 221 -ISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSG 279
Query: 306 ALDNDRTVKIW 316
+ D V +W
Sbjct: 280 SYDE--AVFLW 288
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 52/191 (27%), Positives = 82/191 (42%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
R + ++L H +S + DG L+AS + D L+
Sbjct: 291 RSARVMKSLPAHSDPVSGIDVVWDGTLIASCATD--------GLVRIWDTSTGQCLRTLV 342
Query: 71 GHEQG--VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVN--FNPQ 126
HE VS + FS + +++++ + D +RLWD CLKT GH+N + ++ F
Sbjct: 343 -HEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVY 401
Query: 127 SNMI----------VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF--NRDGTMIVT 174
I VSG+ D + WDV T K L+ + AH V VD +G +V+
Sbjct: 402 GQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVS 461
Query: 175 SSYDGLCRIWD 185
DG R+W+
Sbjct: 462 CGLDGTVRVWE 472
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 513 (185.6 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 94/245 (38%), Positives = 157/245 (64%)
Query: 5 QSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXX 64
++ ES ++ TL GH ++++ V S + R +A+SS+D
Sbjct: 36 RNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLF-- 93
Query: 65 XLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
GH +G+S + +++ S++L SASDDKTIR+WD ++ L GHTNYV ++FN
Sbjct: 94 ------GHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFN 147
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
P ++VSG++DETVRIW+++ G CL++LPAHS+P+ +V + DGT+ T+SYDG+ RIW
Sbjct: 148 PLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D +G C+KTL++ N P+S ++F+ N K++LV L++ +RLW+Y ++++ + H N+
Sbjct: 208 DVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNT 267
Query: 245 KYCIS 249
+Y +S
Sbjct: 268 RYSMS 272
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 68/233 (29%), Positives = 124/233 (53%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GHE+ V+ + S + R++ ++S D TI++W T TL GH + V + S +
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S + D+T+RIWD + ++ L H++ V+++DFN GT++V+ S+D RIW+ G
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C++ L P +S V S +G + D R+W+ +G+ LKT N +S+
Sbjct: 172 CLRMLPAHSEPIIS-VSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVP--LSN 228
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA--SHPTENI 301
N KY++ + +S + LW+ + +VV+ + H + S++ + ++NI
Sbjct: 229 LQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSKNI 281
Score = 201 (75.8 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 156 HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFI 215
H VT V + + I TSS DG +IW A T TL +S VK++ K++
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRG-ISQVKWATGSKYL 111
Query: 216 LVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275
+ D T+R+W++ ++ GHTN Y S F+ G +VSGS D V +W LQ
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTN--YVSSIDFNPL-GTLLVSGSWDETVRIWNLQ 168
Query: 276 SRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
++ L H++P+ISV+ + A+ + D +IW
Sbjct: 169 DGTCLRMLPAHSEPIISVSISADGTLCATASYDG--MARIW 207
Score = 176 (67.0 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 41/123 (33%), Positives = 66/123 (53%)
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
TL E V+ V SPN ++I + D T+++W+ T ++ T GH IS
Sbjct: 49 TLFGHEKS-VTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRG---ISQVKW 104
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313
T KY+ S S+D + +W+ + R V+ L+GHT+ V S+ +P ++ SG+ D TV
Sbjct: 105 ATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDE--TV 162
Query: 314 KIW 316
+IW
Sbjct: 163 RIW 165
Score = 48 (22.0 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 227 WN-YSTGKILKTYTGHTN--SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283
W+ YS+ I K N S Y + S + Y++ SED + + + ++ ++
Sbjct: 273 WDCYSSKNIPKNTEALPNNDSSYPDDAE-SFMHDAYLLIPSEDGTIQITDPSTKIIIDDS 331
Query: 284 EGHTD-PVISVASHPTEN--IIASGALDNDRTVKIW 316
H+D P S+ + + II SG D V++W
Sbjct: 332 IRHSDDPETSLLNVTSLGPFIITSGT---DPYVRVW 364
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 440 (159.9 bits), Expect = 2.0e-52, Sum P(3) = 2.0e-52
Identities = 75/154 (48%), Positives = 110/154 (71%)
Query: 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTA 162
P + L+GH NYV+C+ F+P+ N++ SG++DE V +WDV+ G+ ++ LPAHSDPV+
Sbjct: 294 PARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSG 353
Query: 163 VDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN 222
+DF RDGT++V+ S DGL RIWD +TG C++TL+ ++NP V+ V FSPNG++IL LD+
Sbjct: 354 IDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDS 413
Query: 223 TLRLWNYST--GKILKTYTGHTNSKYCISSTFSV 254
+RLW+Y K+ KTY GH N+ + I F V
Sbjct: 414 CIRLWDYIAHPSKVKKTYQGHVNTGFSIGGCFGV 447
Score = 276 (102.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 80/277 (28%), Positives = 127/277 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + I+ V+ S +GR +AS+SAD + GH GVS
Sbjct: 176 LRGHSQPIAQVRISPNGRWIASASAD--------GTARIWDAETGAHIDTLVGHMAGVSC 227
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
L +S DS L + SDDK IRLWD TA + +SGA
Sbjct: 228 LAWSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIG 287
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
V + L H + V + F+ G ++ + SYD +WD G M++L
Sbjct: 288 VGGGGGPARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSL-PA 346
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258
+ PVS + F +G ++ + D +R+W+ +TG+ L+T H ++ + FS NG+
Sbjct: 347 HSDPVSGIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLV-HEDNPAVTNVCFS-PNGR 404
Query: 259 YIVSGSEDSCVYLWELQSR--KVVQKLEGHTDPVISV 293
YI++ + DSC+ LW+ + KV + +GH + S+
Sbjct: 405 YILAFNLDSCIRLWDYIAHPSKVKKTYQGHVNTGFSI 441
Score = 245 (91.3 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 63/248 (25%), Positives = 118/248 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH Q ++ + S + R++ SAS D T R+WD T + TL+GH V C+ ++P S +
Sbjct: 178 GHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSPDSGTL 237
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHS-DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+G+ D+ +R+WD T + + D GT I +S G+ + G
Sbjct: 238 ATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGGGGPARG 297
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ L+ N V + FSP G + G+ D + LW+ G+++++ H++ +S
Sbjct: 298 -TRRPLLGHHNY-VYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDP---VS 352
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS-VASHPTENIIASGALD 308
+G +VS S D + +W+ + + ++ L +P ++ V P I + LD
Sbjct: 353 GIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLD 412
Query: 309 NDRTVKIW 316
+ +++W
Sbjct: 413 S--CIRLW 418
Score = 85 (35.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 30/111 (27%), Positives = 47/111 (42%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L ++L H +S + F DG L+ S S D L+ HE
Sbjct: 340 LMRSLPAHSDPVSGIDFCRDGTLVVSCSTD--------GLIRIWDTATGQCLRTLV-HED 390
Query: 75 G--VSDLVFSSDSRFLVSASDDKTIRLWD--VPTATCLKTLIGHTNYVFCV 121
V+++ FS + R++++ + D IRLWD + KT GH N F +
Sbjct: 391 NPAVTNVCFSPNGRYILAFNLDSCIRLWDYIAHPSKVKKTYQGHVNTGFSI 441
Score = 77 (32.2 bits), Expect = 2.0e-52, Sum P(3) = 2.0e-52
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 259 YIVSGSEDSCVYLWELQSRKVVQKLEGH 286
++ S SED + LW+++S++VVQK+ H
Sbjct: 488 FVASASEDGHIVLWDVKSKEVVQKIAAH 515
Score = 55 (24.4 bits), Expect = 2.0e-52, Sum P(3) = 2.0e-52
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADK 45
TL GH+ +S + +S D LA+ S DK
Sbjct: 217 TLVGHMAGVSCLAWSPDSGTLATGSDDK 244
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 506 (183.2 bits), Expect = 3.6e-47, P = 3.6e-47
Identities = 112/317 (35%), Positives = 175/317 (55%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S +++ + P T L QTL GH +++ SV FS DG+ LASSS+D
Sbjct: 937 SEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQ- 995
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
Q F GH+ + + FS D + LVS SDD TI+LWD+ T+ ++L H+ V
Sbjct: 996 -------QTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVH 1048
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V F+P + S + D T+++WD TG+ + L HS V +V F+ DG ++ ++SYDG
Sbjct: 1049 AVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDG 1108
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
++W+ TG +TL + V V FSP+GK + G D+T++LW+ +TG++L+T
Sbjct: 1109 TIKLWNPLTGELQQTLTG-RSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLE 1167
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH++ I S +GK + SGS D LW+ + +++Q EGH+ V SVA P
Sbjct: 1168 GHSDR---IQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDG 1224
Query: 300 NIIASGALDNDRTVKIW 316
++AS + T+K+W
Sbjct: 1225 KLLASSSYGE--TIKLW 1239
Score = 494 (179.0 bits), Expect = 6.9e-46, P = 6.9e-46
Identities = 109/317 (34%), Positives = 178/317 (56%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D +++ + P T L QTL+GH + S+ FS DG+LLAS S D
Sbjct: 769 SYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGEL-- 826
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
LQ F GH + + F+ D + L SASDD TI++WD+ T +TL H+ V
Sbjct: 827 ------LQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVR 880
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V F+P ++ S + D T+++W+ TG+ + L S V +V F+ DG + + S
Sbjct: 881 SVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKN 940
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
++W+ +TG ++TL + + V V FSP+GK + + D T++LWN +TG++ +T+
Sbjct: 941 TVKLWNPATGELLQTL-EGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK 999
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH + + FS +GK++VSGS+D+ + LW+L + ++ Q LE H+ V +VA P +
Sbjct: 1000 GH--DLWIRAVAFS-PDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDD 1056
Query: 300 NIIASGALDNDRTVKIW 316
+AS +LD+ T+K+W
Sbjct: 1057 KQLASSSLDS--TIKLW 1071
Score = 462 (167.7 bits), Expect = 1.8e-42, P = 1.8e-42
Identities = 106/300 (35%), Positives = 160/300 (53%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
QTL HL + SV FS DG+ L S S D LQ GH V
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGEL--------LQTLDGHSGTV 795
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
L FS D + L S S D TI LWD T L+T GH + ++ V F P + S + D
Sbjct: 796 ESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDD 855
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
T++IWD+ TG+ + L +HS V +V F+ DG ++ +SS D ++W+ +TG ++L
Sbjct: 856 STIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSL- 914
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256
+ + V V FSP+GK + G+ NT++LWN +TG++L+T GH+ S ++ FS +
Sbjct: 915 EGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVA--FS-PD 971
Query: 257 GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GK + S S D+ + LW + ++ Q +GH + +VA P + SG+ DN T+K+W
Sbjct: 972 GKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDN--TIKLW 1029
Score = 436 (158.5 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 104/302 (34%), Positives = 160/302 (52%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L QTL+ H +++ SV FS DG+LLASSS D Q G
Sbjct: 868 LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQ--------QSLEGRSG 919
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V + FS D + L S S+ T++LW+ T L+TL GH+ V V F+P + S +
Sbjct: 920 WVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSS 979
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T+++W+ TG+ + H + AV F+ DG +V+ S D ++WD +T ++
Sbjct: 980 SDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQS 1039
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254
L +D + V V FSP+ K + +LD+T++LW+ +TG++ +T GH S+ S TFS
Sbjct: 1040 L-EDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGH--SQGVRSVTFS- 1095
Query: 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314
+GK + S S D + LW + ++ Q L G +D V SVA P +ASG D+ T+K
Sbjct: 1096 PDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDS--TIK 1153
Query: 315 IW 316
+W
Sbjct: 1154 LW 1155
Score = 427 (155.4 bits), Expect = 9.8e-39, P = 9.8e-39
Identities = 106/317 (33%), Positives = 165/317 (52%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
SSD +++ + T L QT GH I +V FS DG+ L S S D
Sbjct: 979 SSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQ- 1037
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
Q H + V + FS D + L S+S D TI+LWD T +TL GH+ V
Sbjct: 1038 -------QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVR 1090
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V F+P ++ S ++D T+++W+ TG+ + L SD V +V F+ DG + + YD
Sbjct: 1091 SVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDS 1150
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
++WD++TG ++TL + + + V FSP+GK + G+ D T +LW+ +TG++L+ +
Sbjct: 1151 TIKLWDSATGELLQTL-EGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFE 1209
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH SK+ S FS +GK + S S + LW+ + +++Q L + SVA P
Sbjct: 1210 GH--SKWVESVAFS-PDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDG 1266
Query: 300 NIIASGALDNDRTVKIW 316
N +AS +D T KIW
Sbjct: 1267 NRLAS--VDIFDT-KIW 1280
Score = 386 (140.9 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 89/274 (32%), Positives = 147/274 (53%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK-FTGHE 73
L Q+L H R++ +V FS D + LASSS D LQ+ GH
Sbjct: 1036 LQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGE---------LQRTLEGHS 1086
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
QGV + FS D + L S S D TI+LW+ T +TL G +++V V F+P + SG
Sbjct: 1087 QGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASG 1146
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+D T+++WD TG+ L+ L HSD + +V F+ DG ++ + SYD ++WD +TG ++
Sbjct: 1147 YYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQ 1206
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
+ + + V V FSP+GK + + T++LW+ TG++L+T S ++ FS
Sbjct: 1207 -IFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVA--FS 1263
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287
+G + S + +W+ + +++Q L+GH+
Sbjct: 1264 -PDGNRLAS-VDIFDTKIWDPATGELLQALKGHS 1295
Score = 365 (133.5 bits), Expect = 4.0e-32, P = 4.0e-32
Identities = 84/237 (35%), Positives = 129/237 (54%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L +TL GH + + SV FS DG+LLAS+S D Q TG
Sbjct: 1078 LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ--------QTLTGRSD 1129
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V + FS D + L S D TI+LWD T L+TL GH++ + V F+P ++ SG+
Sbjct: 1130 WVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGS 1189
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
+D+T ++WD TG+ L++ HS V +V F+ DG ++ +SSY ++WD TG ++T
Sbjct: 1190 YDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQT 1249
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
L D + S V FSP+G + + +T ++W+ +TG++L+ GH SK+ S T
Sbjct: 1250 LNDPDESAGS-VAFSPDGNRLASVDIFDT-KIWDPATGELLQALKGH--SKWVWSRT 1302
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 455 (165.2 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 107/297 (36%), Positives = 156/297 (52%)
Query: 21 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK-FTGHEQGVSDL 79
GH RA+ SV FSHD RLLAS+S D LQ GH + V +
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGD---------GTVKIWDTATSFLQNTLEGHNEWVKSV 311
Query: 80 VFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETV 139
VFS DSR L SASDD T+++WD T T + L GH + V V F+ S +I SG+ D TV
Sbjct: 312 VFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTV 371
Query: 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE 199
RIW+ TG H D V AV F D + ++S G +IWD TG ++ +++
Sbjct: 372 RIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS-LQNVLEGH 430
Query: 200 NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259
+ V+ V FSP+ + + + D T+++W+ +TG + +T GH + + S FS + +
Sbjct: 431 DDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHND--WVRSVVFS-HDSRL 487
Query: 260 IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
I S S+D V +W+ + + LE H + V SV ++AS + +D TVKIW
Sbjct: 488 IASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASAS--DDMTVKIW 542
Score = 424 (154.3 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 103/303 (33%), Positives = 152/303 (50%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT-GHE 73
L TL GH + SV FSHD RLLAS+S D LQ+ GH
Sbjct: 297 LQNTLEGHNEWVKSVVFSHDSRLLASASDD---------GTVKIWDTATGTLQRMLKGHN 347
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V +VFS DSR + S S+D+T+R+W+ T T H + V V+F S + S
Sbjct: 348 DSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASA 407
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ V+IWD +TG VL H D V +V F+ D ++ ++S D +IW A+TG +
Sbjct: 408 SDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQR 467
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
TL + N V V FS + + I + D T+++W+ +T + H N + S FS
Sbjct: 468 TL-EGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDN--WVRSVVFS 524
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313
+ + + S S+D V +W+ + + LEGH D V SV+ P ++AS + +D TV
Sbjct: 525 -HDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASAS--DDGTV 581
Query: 314 KIW 316
KIW
Sbjct: 582 KIW 584
Score = 413 (150.4 bits), Expect = 5.0e-37, P = 5.0e-37
Identities = 103/306 (33%), Positives = 154/306 (50%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH ++ SV FSHD RL+AS S D+ F HE
Sbjct: 338 TLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHT--------FEDHE 389
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V + F+ DSR L SASD +++WD T + L GH + V V+F+P S ++ S
Sbjct: 390 DSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASA 449
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D TV+IW TG + L H+D V +V F+ D +I ++S D +IWD +T
Sbjct: 450 SDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQN 509
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L +N V V FS + + + + D T+++W+ +TG + T GH + +S FS
Sbjct: 510 NLESHDNW-VRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVS--FS 566
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313
+ + + S S+D V +W + V +G IS+A T N++AS A+D D TV
Sbjct: 567 -PDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLAS-AMD-DGTV 623
Query: 314 KIWTQE 319
KIW E
Sbjct: 624 KIWDME 629
Score = 392 (143.0 bits), Expect = 8.6e-35, P = 8.6e-35
Identities = 85/249 (34%), Positives = 133/249 (53%)
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
+F GH++ V + FS DSR L SAS D T+++WD T+ TL GH +V V F+ S
Sbjct: 258 QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS 317
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
++ S + D TV+IWD TG ++L H+D V +V F+ D +I + S D RIW+ +
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETT 377
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
TG T D E+ V V F+ + + + + +++W+ TG + GH + C
Sbjct: 378 TGLLRHTFEDHEDS-VMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDD---C 433
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
++S + + + S S+D V +W + + + LEGH D V SV +IAS +
Sbjct: 434 VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASAS- 492
Query: 308 DNDRTVKIW 316
+D TVKIW
Sbjct: 493 -DDMTVKIW 500
Score = 319 (117.4 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 76/229 (33%), Positives = 109/229 (47%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK-F 69
R +L L GH ++SV FS D RLLAS+S D+ LQ+
Sbjct: 419 RTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGS---------LQRTL 469
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
GH V +VFS DSR + SASDD T+++WD T L H N+V V F+ S +
Sbjct: 470 EGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRL 529
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D TV+IWD TG L H D V +V F+ D ++ ++S DG +IW A+TG
Sbjct: 530 LASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATG 589
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238
T +S FS + D T+++W+ + T+
Sbjct: 590 TVQHTFDGSGRVAISLA-FSHTSNLLASAMDDGTVKIWDMEIYSLRHTF 637
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 91/305 (29%), Positives = 153/305 (50%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
+ L + L H+ +++V + G + S D+ L GH
Sbjct: 82 FYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEE--------LHTLEGH 133
Query: 73 EQGVSDLVFSSD-SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
V + F++ + + S DKT +LW V T C T GHT + C++FNPQS ++
Sbjct: 134 RNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVA 193
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
+G+ D T ++WD+++G+ + L HS + ++ FN G I+T S+D +W+A TG
Sbjct: 194 TGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK 253
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
+ TLI +S F+ + IL G++D T +LW+ GK + T TGH + + S
Sbjct: 254 VYTLIG-HCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE--ILDSC 310
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311
F T GK I + S D ++ +R+ V KLEGH + ++ +P N + +G+ +D+
Sbjct: 311 FDYT-GKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGS--SDK 367
Query: 312 TVKIW 316
T +IW
Sbjct: 368 TARIW 372
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 91/300 (30%), Positives = 151/300 (50%)
Query: 18 TLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
TL GH + ++ F++ G +A+ S DK F GH +
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHT--------FRGHTAEI 180
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
L F+ S + + S D T +LWD+ + + TL GH+ + ++FN N I++G+FD
Sbjct: 181 VCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFD 240
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
TV +W+ TG+ + L H +++ FN D ++I+T S D C++WDA G C+ TL
Sbjct: 241 HTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLT 300
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256
++ + F GK I + D T R+++ +T + + GH IS F+
Sbjct: 301 GHDDEILDSC-FDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKIS--FN-PQ 356
Query: 257 GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
G +++GS D +W+ Q+ + +Q LEGHTD + S A + +II +G+ DN T +IW
Sbjct: 357 GNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDN--TCRIW 414
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 91/305 (29%), Positives = 153/305 (50%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
+ L + L H+ +++V + G + S D+ L GH
Sbjct: 82 FYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEE--------LHTLEGH 133
Query: 73 EQGVSDLVFSSD-SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
V + F++ + + S DKT +LW T C T GHT + C++FNPQS ++
Sbjct: 134 RNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVA 193
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
+G+ D T ++WD+++G+ + L H + ++ F+ G I+T S+D +WDASTG
Sbjct: 194 TGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRK 253
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
+ TLI +S FS + IL G++D T LW+ ++GK + T TGH + + S
Sbjct: 254 VHTLIG-HCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDE--ILDSC 310
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311
F T GK I + S D ++ +RK + KLEGH + ++ +P N + +G+ +D+
Sbjct: 311 FDYT-GKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGS--SDK 367
Query: 312 TVKIW 316
T +IW
Sbjct: 368 TARIW 372
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 90/300 (30%), Positives = 152/300 (50%)
Query: 18 TLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
TL GH + ++ F++ G +A+ S DK F GH +
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHT--------FRGHTAEI 180
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
L F+ S + + S D T +LWD+ + + TL GH + ++F+ + I++G+FD
Sbjct: 181 VCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFD 240
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
TV +WD TG+ + L H +++ F+ D ++I+T S D C +WDA++G C+ TL
Sbjct: 241 HTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLT 300
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256
++ + F GK I + D T R++N +T K + GH IS F+
Sbjct: 301 GHDDEILDSC-FDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS--FN-PQ 356
Query: 257 GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
G +++GS D +W++Q+ + +Q LEGHTD + S A + NI+ +G+ DN + +IW
Sbjct: 357 GNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN--SCRIW 414
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 75/250 (30%), Positives = 124/250 (49%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN-PQSNMI 130
H ++++ + ++ S D+T ++WD + L TL GH N V+ + FN P + I
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+G+FD+T ++W +TGKC H+ + + FN T++ T S D ++WD +G
Sbjct: 151 ATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGE 210
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ TL +S + F +G I+ G+ D+T+ +W+ STG+ + T GH ISS
Sbjct: 211 EVVTLTGHLAEIIS-LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAE---ISS 266
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
+ I++GS D LW+ S K V L GH D ++ T +IA+ + D
Sbjct: 267 ALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 311 RTVKIWTQEK 320
V T K
Sbjct: 327 ARVYNATTRK 336
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 73/250 (29%), Positives = 120/250 (48%)
Query: 71 GHEQGVSDLVFSSDS---RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
G Q V L+ +S + R LV +K + D K L H + V N
Sbjct: 46 GEIQKVEPLITASRTKQVRLLVQRLQEKLRQHCD-HNFYLFKVLRAHILPLTNVALNKAG 104
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD-GTMIVTSSYDGLCRIWDA 186
+ ++G++D T ++WD +G+ L L H + V A+ FN G I T S+D C++W A
Sbjct: 105 SCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSA 164
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG C T + + F+P + G++D T +LW+ +G+ + T TGH
Sbjct: 165 ETGKCYHTF-RGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAE-- 221
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
IS +F T+G I++GS D V +W+ + + V L GH + S ++I +G+
Sbjct: 222 IISLSFD-TSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGS 280
Query: 307 LDNDRTVKIW 316
+D +T +W
Sbjct: 281 MD--KTCMLW 288
Score = 275 (101.9 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 70/225 (31%), Positives = 112/225 (49%)
Query: 95 KTIRLWDVPTATCLKTLIGHTNYV---FCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK 151
K+I L ++ +T + TL+G V + Q ++V E +R K
Sbjct: 28 KSIDLLELSPSTDVNTLVGEIQKVEPLITASRTKQVRLLVQ-RLQEKLRQHCDHNFYLFK 86
Query: 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN 211
VL AH P+T V N+ G+ +T SYD C++WD ++G + TL N + +P
Sbjct: 87 VLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 212 GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
G I G+ D T +LW+ TGK T+ GHT C+S F+ + +GS D+ L
Sbjct: 147 GDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLS--FN-PQSTVVATGSMDTTAKL 203
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
W++QS + V L GH +IS++ + + I +G+ D+ TV +W
Sbjct: 204 WDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDH--TVVVW 246
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 92/300 (30%), Positives = 153/300 (51%)
Query: 18 TLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
TL GH + ++ F++ G +A+ S DK F GH +
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHT--------FRGHTAEI 180
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
L F+ S + + S D T +LWD+ + TL GH+ + ++FN + I++G+FD
Sbjct: 181 VCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFD 240
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
TV +WD TG+ + +L H +++ FN D ++I+T S D C++WDA+ G C+ TL
Sbjct: 241 HTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLT 300
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256
++ + F GK I + D T R+++ +T K + GH IS F+
Sbjct: 301 GHDDEILDSC-FDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS--FN-PQ 356
Query: 257 GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
G ++++GS D +W+ Q+ + +Q LEGHTD + S A + NI+ +G+ DN T +IW
Sbjct: 357 GNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN--TCRIW 414
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 73/247 (29%), Positives = 125/247 (50%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN-PQSNMI 130
H ++++ + ++ S D+T +LWD + L TL GH N V+ + FN P + I
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI 150
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+G+FD+T ++W V+TGKC H+ + + FN T++ T S D ++WD G
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE 210
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ TL +S + F+ +G I+ G+ D+T+ +W+ TG+ + GH ISS
Sbjct: 211 EVYTLRGHSAEIIS-LSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAE---ISS 266
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
+ I++GS D LW+ + K V L GH D ++ T +IA+ + D
Sbjct: 267 ASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG- 325
Query: 311 RTVKIWT 317
T +I++
Sbjct: 326 -TARIFS 331
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 63/209 (30%), Positives = 107/209 (51%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
K L H + V N + ++G++D T ++WD +G+ L L H + V A+ FN
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 169 -GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
G I T S+D C++W TG C T + + F+P + G++D T +LW
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTF-RGHTAEIVCLSFNPQSTLVATGSMDTTAKLW 204
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287
+ G+ + T GH S IS +F+ T+G I++GS D V +W+ + + V L GH
Sbjct: 205 DIQNGEEVYTLRGH--SAEIISLSFN-TSGDRIITGSFDHTVVVWDADTGRKVNILIGHC 261
Query: 288 DPVISVASHPTENIIASGALDNDRTVKIW 316
+ S + + ++I +G++D +T K+W
Sbjct: 262 AEISSASFNWDCSLILTGSMD--KTCKLW 288
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 401 (146.2 bits), Expect = 3.8e-37, P = 3.8e-37
Identities = 107/321 (33%), Positives = 162/321 (50%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L TL H I V+FS DG+ LA+ LQ+ + +
Sbjct: 292 LLHTLE-HTSVICYVRFSADGKFLATGC------NRAAMVFNVETGKLITLLQEESSKRE 344
Query: 75 G---VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
G V + FS D ++L + +D+ IR+WD+ + L GH ++ ++F+ +V
Sbjct: 345 GDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLV 404
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
SG+ D TV +WDV+ G+ +L H+D VT V F+ DG I S D + RIW S+G
Sbjct: 405 SGSGDRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGT 461
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-----------YSTGKILK-TY 238
++ L E S V FSP+GK+++ G+LDNT++LW Y G I K T+
Sbjct: 462 LVEQLHGHEESVYS-VAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTF 520
Query: 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPT 298
TGH + + +S T S +GK+I+SGS+D + W S L+GH + VISVA P
Sbjct: 521 TGHKD--FILSVTVS-PDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPN 577
Query: 299 ENIIASGALDNDRTVKIWTQE 319
+ A+G+ D +IW+ E
Sbjct: 578 GHCFATGS--GDLRARIWSYE 596
Score = 237 (88.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 63/220 (28%), Positives = 109/220 (49%)
Query: 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP--- 159
P + L + HT+ + V F+ + +G + +++V+TGK + +L S
Sbjct: 287 PISVQLLHTLEHTSVICYVRFSADGKFLATGC-NRAAMVFNVETGKLITLLQEESSKREG 345
Query: 160 ---VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFIL 216
V +V F+ DG + T D RIWD + + L E S + FS +GK ++
Sbjct: 346 DLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYS-LDFSKDGKTLV 404
Query: 217 VGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
G+ D T+ LW+ G+ + HT+ +++ +G++I +GS D + +W S
Sbjct: 405 SGSGDRTVCLWDVEAGE--QKLILHTDDG--VTTVMFSPDGQFIAAGSLDKVIRIWT-SS 459
Query: 277 RKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+V++L GH + V SVA P + SG+LDN T+K+W
Sbjct: 460 GTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDN--TIKLW 497
Score = 171 (65.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 41/133 (30%), Positives = 60/133 (45%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXX----LQKF 69
TL + L+GH ++ SV FS DG+ L S S D Q F
Sbjct: 461 TLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTF 520
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH+ + + S D ++++S S D+TI+ W + TL GH N V V +P +
Sbjct: 521 TGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHC 580
Query: 130 IVSGAFDETVRIW 142
+G+ D RIW
Sbjct: 581 FATGSGDLRARIW 593
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 396 (144.5 bits), Expect = 8.9e-37, P = 8.9e-37
Identities = 96/308 (31%), Positives = 154/308 (50%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVF 81
H + V+FS DG+ LA+ ++ + K +G + + + F
Sbjct: 268 HDSVVCCVRFSRDGKYLATG-CNRSAQIFDVTLGQNVAVLQDESVDK-SG-DLYIRSVCF 324
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
S D ++L + ++DK IR+WD+ T T GH ++ ++F I SG+ D+TVR+
Sbjct: 325 SPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRL 384
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI--DDE 199
WD+ GK + L D VT V + DG + S D R+WD +TG+ ++ L D
Sbjct: 385 WDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGH 443
Query: 200 NPPVSFVKFSPNGKFILVGTLDNTLRLWN-------YST----GKILKTYTGHTNSKYCI 248
V V F+PNGK ++ G+LD T++LW Y++ GK +T+ GH K +
Sbjct: 444 KDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGH---KDFV 500
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
S +G +++SGS+D V W+ + L+GH + VISVA PT N+ A+G+
Sbjct: 501 LSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGS-- 558
Query: 309 NDRTVKIW 316
D +IW
Sbjct: 559 GDMRARIW 566
Score = 259 (96.2 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 70/236 (29%), Positives = 108/236 (45%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T+ +GH + I S+ F+ +GR +AS S DK E
Sbjct: 349 TIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSI---------E 399
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI---GHTNYVFCVNFNPQSNMI 130
GV+ + S D ++ + S DKT+R+WD T ++ L GH + V+ V F P +
Sbjct: 400 DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKEL 459
Query: 131 VSGAFDETVRIWDV-----------KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
VSG+ D+T+++W++ K GKC + H D V +V DG +++ S D
Sbjct: 460 VSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDR 519
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS--TGK 233
+ WD TG+ L +N +S V SP G G+ D R+W YS TG+
Sbjct: 520 GVQFWDPITGNAQMMLQGHKNSVIS-VAPSPTGNLFATGSGDMRARIWRYSAYTGR 574
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 395 (144.1 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 90/254 (35%), Positives = 137/254 (53%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
LQ GHE V + +S DSR L SASDD+T+++WD T + TL GH++ V V F+
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSH 348
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
S ++ S A D TV+IWD TG L H D V +V F+ D ++ ++S D +IWD
Sbjct: 349 DSRLLAS-ASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
TG TL + V V FS + + + + D+T+++W+ TG + T GH +
Sbjct: 408 TGTGSLQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRD-- 464
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305
+ S FS + + + S S+D V +W+ + LEGH+ V SV+ ++AS
Sbjct: 465 WVRSVIFS-HDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASA 523
Query: 306 ALDNDRTVKIWTQE 319
+ ND+TV+IW E
Sbjct: 524 S--NDQTVRIWDIE 535
Score = 372 (136.0 bits), Expect = 6.1e-34, P = 6.1e-34
Identities = 89/263 (33%), Positives = 131/263 (49%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
Q L GH A+ SV +SHD RLLAS+S D+ GH V
Sbjct: 290 QALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHT--------LEGHSDLV 341
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
++FS DSR L SASD T+++WD T + TL GH ++V V F+ S ++ S + D
Sbjct: 342 RSVIFSHDSRLLASASDS-TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDD 400
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
TV+IWD TG L H D V +V F+ D ++ ++S D +IWD TG TL
Sbjct: 401 STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL- 459
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256
+ V V FS + + + + D T+R+W+ G T GH S S +FS +
Sbjct: 460 EGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGH--SSLVTSVSFS-HD 516
Query: 257 GKYIVSGSEDSCVYLWELQSRKV 279
+ + S S D V +W++++R +
Sbjct: 517 SRLLASASNDQTVRIWDIEARSL 539
Score = 330 (121.2 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 81/240 (33%), Positives = 120/240 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T L TL GH + SV FSHD RLLAS+S
Sbjct: 315 SDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASAS----------DSTVKIW 364
Query: 60 XXXXXXLQK-FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV 118
LQ GH V ++FS DS+ L SASDD T+++WD T + TL GH ++V
Sbjct: 365 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV 424
Query: 119 FCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD 178
V F+ S ++ S + D TV+IWD TG L H D V +V F+ D ++ ++S D
Sbjct: 425 RSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDD 484
Query: 179 GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238
RIWD G TL + + V+ V FS + + + + D T+R+W+ + T+
Sbjct: 485 RTVRIWDTEKGSHKHTL-EGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTF 543
Score = 316 (116.3 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 85/250 (34%), Positives = 130/250 (52%)
Query: 77 SDLVFS-SDS--RFLVSASDDKTIRLW-DVPT--ATCLKTLIGHTNYVFCVNFNPQSNMI 130
S LVFS +DS R L + I DV + CL+ L GH V V+++ S ++
Sbjct: 252 SALVFSPADSLIRKLFGKEEPNWIETKPDVANHWSPCLQALEGHEAAVLSVSYSHDSRLL 311
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S + D TV+IWD +TG L HSD V +V F+ D ++ ++S D +IWD TG
Sbjct: 312 ASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGS 370
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
TL + V V FS + + + + D+T+++W+ TG + T GH + + S
Sbjct: 371 LQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRD--WVRSV 427
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
FS + + + S S+DS V +W+ + + LEGH D V SV ++AS + +D
Sbjct: 428 IFS-HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASAS--DD 484
Query: 311 RTVKIWTQEK 320
RTV+IW EK
Sbjct: 485 RTVRIWDTEK 494
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 330 (121.2 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 71/198 (35%), Positives = 114/198 (57%)
Query: 1 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
+SSD ++ Y + T+N +++KFS +G+ A SS++
Sbjct: 6 LSSD--IQESDLYKIRYTINEPSITFTAIKFSPNGQNFACSSSN--------GKIYIYNT 55
Query: 61 XXXXXLQKFTGHEQGVSDLVFSS-DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
+ +GH +G+SD+V+S +S L S SDD TIRLW++ C+K L HT ++
Sbjct: 56 TTGKLITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHIT 115
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKT--GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY 177
+ F + N+++SG+ DET+ IWD+ + GK L L AHSDPV+++ D ++IV++SY
Sbjct: 116 TLKFTQKGNILISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASY 175
Query: 178 DGLCRIWDASTGHCMKTL 195
DGL R++D T C+KTL
Sbjct: 176 DGLMRLFDLQTSQCLKTL 193
Score = 256 (95.2 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 66/236 (27%), Positives = 123/236 (52%)
Query: 68 KFTGHEQGVS--DLVFSSDSR-FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
++T +E ++ + FS + + F S+S+ K I +++ T + TL GHT + + ++
Sbjct: 19 RYTINEPSITFTAIKFSPNGQNFACSSSNGK-IYIYNTTTGKLITTLSGHTKGISDIVYS 77
Query: 125 P-QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
P SN++ S + D T+R+W++ +C+K+L H+ +T + F + G ++++ S D I
Sbjct: 78 PINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETITI 137
Query: 184 WD-ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT--- 239
WD S G + T + + PVS + +P+ I+ + D +RL++ T + LKT T
Sbjct: 138 WDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTNST 197
Query: 240 --GH------TNS--KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
GH TN + I+ NG++I++ S D + LW KV + +G
Sbjct: 198 FGGHGTATASTNDVINFPIAKVELSPNGQFILNSSLDGKIRLWNYMENKVYKTYQG 253
Score = 230 (86.0 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 49/116 (42%), Positives = 67/116 (57%)
Query: 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE------- 199
GK L L AHSDPV+++ D ++IV++SYDGL R++D T C+KTL +
Sbjct: 145 GKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTNSTFGGHGTA 204
Query: 200 --------NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
N P++ V+ SPNG+FIL +LD +RLWNY K+ KTY G K C
Sbjct: 205 TASTNDVINFPIAKVELSPNGQFILNSSLDGKIRLWNYMENKVYKTYQGINGEKIC 260
Score = 201 (75.8 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 51/172 (29%), Positives = 87/172 (50%)
Query: 143 DVKTGKCLKVLPAHSDP---VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE 199
D++ K+ ++P TA+ F+ +G SS +G I++ +TG + TL
Sbjct: 9 DIQESDLYKIRYTINEPSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTL-SGH 67
Query: 200 NPPVSFVKFSPNGKFILVGTLDN-TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258
+S + +SP IL D+ T+RLWN + + +K HT Y I++ G
Sbjct: 68 TKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHT---YHITTLKFTQKGN 124
Query: 259 YIVSGSEDSCVYLWELQSR--KVVQKLEGHTDPVISVASHPTENIIASGALD 308
++SGS D + +W++ S K++ L H+DPV S+A P ++II S + D
Sbjct: 125 ILISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYD 176
Score = 180 (68.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/199 (23%), Positives = 97/199 (48%)
Query: 108 LKTLIGHTNYVF-CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN 166
++ I + F + F+P + + + I++ TGK + L H+ ++ + ++
Sbjct: 18 IRYTINEPSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYS 77
Query: 167 RDGTMIVTSSYDGLC-RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
+ I+ S D L R+W+ + C+K L+ ++ +KF+ G ++ G+ D T+
Sbjct: 78 PINSNILASCSDDLTIRLWNITQQRCIK-LLRKHTYHITTLKFTQKGNILISGSSDETIT 136
Query: 226 LWNYST--GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283
+W+ ++ GKIL T H++ +SS + IVS S D + L++LQ+ + ++ L
Sbjct: 137 IWDITSNGGKILTTLAAHSDP---VSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTL 193
Query: 284 EGHTDPVISVASHPTENII 302
T A+ T ++I
Sbjct: 194 TNSTFGGHGTATASTNDVI 212
Score = 162 (62.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 36/119 (30%), Positives = 65/119 (54%)
Query: 201 PPVSF--VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS-TFSVTNG 257
P ++F +KFSPNG+ + + + ++N +TGK++ T +GHT IS +S N
Sbjct: 25 PSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKG---ISDIVYSPINS 81
Query: 258 KYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+ S S+D + LW + ++ ++ L HT + ++ NI+ SG+ +D T+ IW
Sbjct: 82 NILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGS--SDETITIW 138
Score = 131 (51.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 45/166 (27%), Positives = 67/166 (40%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L H I+++KF+ G +L S S+D+ L H VS
Sbjct: 107 LRKHTYHITTLKFTQKGNILISGSSDETITIWDITSNGGKI------LTTLAAHSDPVSS 160
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-----GH------TNYVFC-----VN 122
+ + D +VSAS D +RL+D+ T+ CLKTL GH TN V V
Sbjct: 161 IALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTNSTFGGHGTATASTNDVINFPIAKVE 220
Query: 123 FNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+P I++ + D +R+W+ K K + FN D
Sbjct: 221 LSPNGQFILNSSLDGKIRLWNYMENKVYKTYQGINGEKICEKFNCD 266
Score = 75 (31.5 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 256 NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT---DPVISVASHPTENIIASGALDNDRT 312
N IVSGS+ + + +W++QS+++V +++ T D ++ V ++ I+ G D
Sbjct: 292 NNVLIVSGSDSTGLLIWDIQSKQIVFQVDPQTCGKDAILGVDTYKQGEIL--GCCSRDGI 349
Query: 313 VKIWTQEKE 321
+ I K+
Sbjct: 350 ITILDMNKK 358
Score = 39 (18.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 12/67 (17%), Positives = 27/67 (40%)
Query: 211 NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVY 270
N I+ G+ L +W+ + +I+ T K I + G+ + S D +
Sbjct: 292 NNVLIVSGSDSTGLLIWDIQSKQIVFQVDPQTCGKDAILGVDTYKQGEILGCCSRDGIIT 351
Query: 271 LWELQSR 277
+ ++ +
Sbjct: 352 ILDMNKK 358
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 103/319 (32%), Positives = 155/319 (48%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV- 80
H + V+FS DG+ +A+ + + DL
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYI 258
Query: 81 ----FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
FS D + L + ++DK IR+WD+ T +K L GH ++ ++F P + +VSG+ D
Sbjct: 259 RSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGD 318
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
+VRIWD++T +C L D VT V + DG +I S D R+WD++TG ++ L
Sbjct: 319 RSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Query: 197 D-DEN-----PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK------TYTGHTNS 244
+EN V V FS NG+ I G+LD T++LW+ GK K TY GH
Sbjct: 378 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE-GKSDKKSTCEVTYIGH--- 433
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA----SHPTEN 300
K + S + +YI+SGS+D V W+ S + L+GH + VISVA S TE
Sbjct: 434 KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEG 493
Query: 301 IIASGALDNDRTVKIWTQE 319
I A+G+ D + WT++
Sbjct: 494 IFATGSGDCKARIWKWTKK 512
Score = 226 (84.6 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 73/230 (31%), Positives = 118/230 (51%)
Query: 112 IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL-KVLPAHS-----DPVTA--- 162
+ H++ V CV F+ I +G ++T ++++V TG+ + K++ S D TA
Sbjct: 197 LDHSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGD 255
Query: 163 -----VDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217
V F+ DG ++ T + D L RIWD ST +K L E S + F P+G ++
Sbjct: 256 LYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYS-LDFFPDGDRLVS 314
Query: 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT-NGKYIVSGSEDSCVYLWELQS 276
G+ D ++R+W+ T + T + +T +V+ +GK I +GS D V +W+ +
Sbjct: 315 GSGDRSVRIWDLRTSQCSLTLSIEDGV-----TTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Query: 277 RKVVQKLE-------GHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+V++L+ GH D V SVA IASG+LD RTVK+W E
Sbjct: 370 GFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD--RTVKLWHLE 417
Score = 179 (68.1 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 61/232 (26%), Positives = 95/232 (40%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ + L GH + I S+ F DG L S S D+ E
Sbjct: 289 IIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSI---------ED 339
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-------GHTNYVFCVNFNPQS 127
GV+ + S D + + + S D+T+R+WD T ++ L GH + V+ V F+
Sbjct: 340 GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG 399
Query: 128 NMIVSGAFDETVRIWDV-----KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
I SG+ D TV++W + K C H D V +V D I++ S D
Sbjct: 400 EQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVI 459
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGK----FILVGTLDNTLRLWNYS 230
WD ++G+ + L N +S V S N K G+ D R+W ++
Sbjct: 460 FWDQASGNPLLMLQGHRNSVIS-VAVSLNSKGTEGIFATGSGDCKARIWKWT 510
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 103/319 (32%), Positives = 155/319 (48%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV- 80
H + V+FS DG+ +A+ + + DL
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYI 258
Query: 81 ----FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
FS D + L + ++DK IR+WD+ T +K L GH ++ ++F P + +VSG+ D
Sbjct: 259 RSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGD 318
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
+VRIWD++T +C L D VT V + DG +I S D R+WD++TG ++ L
Sbjct: 319 RSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLD 377
Query: 197 D-DEN-----PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK------TYTGHTNS 244
+EN V V FS NG+ I G+LD T++LW+ GK K TY GH
Sbjct: 378 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE-GKSDKKSTCEVTYIGH--- 433
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA----SHPTEN 300
K + S + +YI+SGS+D V W+ S + L+GH + VISVA S TE
Sbjct: 434 KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEG 493
Query: 301 IIASGALDNDRTVKIWTQE 319
I A+G+ D + WT++
Sbjct: 494 IFATGSGDCKARIWKWTKK 512
Score = 226 (84.6 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 73/230 (31%), Positives = 118/230 (51%)
Query: 112 IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL-KVLPAHS-----DPVTA--- 162
+ H++ V CV F+ I +G ++T ++++V TG+ + K++ S D TA
Sbjct: 197 LDHSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGD 255
Query: 163 -----VDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217
V F+ DG ++ T + D L RIWD ST +K L E S + F P+G ++
Sbjct: 256 LYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYS-LDFFPDGDRLVS 314
Query: 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT-NGKYIVSGSEDSCVYLWELQS 276
G+ D ++R+W+ T + T + +T +V+ +GK I +GS D V +W+ +
Sbjct: 315 GSGDRSVRIWDLRTSQCSLTLSIEDGV-----TTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Query: 277 RKVVQKLE-------GHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+V++L+ GH D V SVA IASG+LD RTVK+W E
Sbjct: 370 GFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD--RTVKLWHLE 417
Score = 179 (68.1 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 61/232 (26%), Positives = 95/232 (40%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ + L GH + I S+ F DG L S S D+ E
Sbjct: 289 IIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSI---------ED 339
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-------GHTNYVFCVNFNPQS 127
GV+ + S D + + + S D+T+R+WD T ++ L GH + V+ V F+
Sbjct: 340 GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG 399
Query: 128 NMIVSGAFDETVRIWDV-----KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
I SG+ D TV++W + K C H D V +V D I++ S D
Sbjct: 400 EQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVI 459
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGK----FILVGTLDNTLRLWNYS 230
WD ++G+ + L N +S V S N K G+ D R+W ++
Sbjct: 460 FWDQASGNPLLMLQGHRNSVIS-VAVSLNSKGTEGIFATGSGDCKARIWKWT 510
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 77/243 (31%), Positives = 132/243 (54%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
LQ GH + + FS D R L S S+D TI+LWD + +TL GH++ V V F+P
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
++ SG+ D T+++W+ + + HSD V +V F+ +G ++W+
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG------------QLWN 141
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ G +K I+ + V V FSP+G+ + G+ + T++LW+ +T + T GH+N
Sbjct: 142 PAIGS-LKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSN-- 198
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305
+ + FS +G+ + SGS D+ + LW+ S + LEGH++ + S+A P ++ASG
Sbjct: 199 WVLPLVFS-PDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASG 257
Query: 306 ALD 308
+ D
Sbjct: 258 SSD 260
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 78/250 (31%), Positives = 128/250 (51%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
Q GH V + FS + + L S S D TI+LW+ + + T+ GH++ V V F+P
Sbjct: 77 QTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN 136
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
++W+ G + HSD V +V F+ DG ++ + S + ++WD+
Sbjct: 137 G------------QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDS 184
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
+T TL N + V FSP+G+ + G+ D T++LW+ +G + T GH+N
Sbjct: 185 ATCGLKHTLGGHSNWVLPLV-FSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNK-- 241
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
I S NG+ + SGS D+ + LW+ + L+GH+D V+SV P ++ SG+
Sbjct: 242 -IESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGS 300
Query: 307 LDNDRTVKIW 316
DN T+K+W
Sbjct: 301 GDN--TIKLW 308
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 68/184 (36%), Positives = 96/184 (52%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L T+ GH + SV FS DG+LLAS SA+K GH
Sbjct: 146 SLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLG--------GHS 197
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V LVFS D R L S S+D TI+LWD P+ + TL GH+N + + F+P ++ SG
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASG 257
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG---H 190
+ D T+++WD TG L HSD V +V F+ D ++ + S D ++WD +TG H
Sbjct: 258 SSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKH 317
Query: 191 CMKT 194
M+T
Sbjct: 318 SMRT 321
Score = 302 (111.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 64/168 (38%), Positives = 102/168 (60%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC-LK-TLIGHTNYVFCVNFNPQSN 128
GH V + FS D + L S S +KTI+LWD +ATC LK TL GH+N+V + F+P
Sbjct: 153 GHSDWVLSVAFSPDGQLLASGSAEKTIKLWD--SATCGLKHTLGGHSNWVLPLVFSPDGR 210
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
++ SG+ D T+++WD +G L HS+ + ++ F+ +G ++ + S D ++WD +T
Sbjct: 211 LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTAT 270
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
G TL + +S V FSP+ + + G+ DNT++LW+ +TG ILK
Sbjct: 271 GSFRHTLKGHSDMVLSVV-FSPDSQLLESGSGDNTIKLWDPATG-ILK 316
Score = 269 (99.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 58/177 (32%), Positives = 98/177 (55%)
Query: 98 RLWDVPTATCLK-TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH 156
+LW+ P LK T+ GH+++V V F+P ++ SG+ ++T+++WD T L H
Sbjct: 138 QLWN-PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGH 196
Query: 157 SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFIL 216
S+ V + F+ DG ++ + S D ++WD +G TL N + + FSPNG+ +
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNK-IESLAFSPNGQLLA 255
Query: 217 VGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
G+ D T++LW+ +TG T GH S +S FS + + + SGS D+ + LW+
Sbjct: 256 SGSSDATIKLWDTATGSFRHTLKGH--SDMVLSVVFS-PDSQLLESGSGDNTIKLWD 309
Score = 207 (77.9 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 51/162 (31%), Positives = 85/162 (52%)
Query: 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFV 206
G L+ L HSD + V F+ DG ++ + S D ++WD ++G +TL + + V V
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTL-EGHSSSVQSV 89
Query: 207 KFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266
FSPNG+ + G+ D T++LWN ++ + T GH++ ++ FS NG+
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVA--FS-PNGQ-------- 138
Query: 267 SCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
LW + +EGH+D V+SVA P ++ASG+ +
Sbjct: 139 ----LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAE 176
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/113 (34%), Positives = 52/113 (46%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
QTL GH I +V FS DGRLLAS S D Q GH V
Sbjct: 35 QTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK--------QTLEGHSSSV 86
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+ FS + + L S S D TI+LW+ + + T+ GH++ V V F+P +
Sbjct: 87 QSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL 139
Score = 88 (36.0 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSAD 44
S+D +++ + P + L QTL GH ++ SV FS +G+LLAS S+D
Sbjct: 60 SNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSD 104
Score = 52 (23.4 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRL 37
SSD +++ + + L T+ GH + SV FS +G+L
Sbjct: 102 SSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL 139
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 92/302 (30%), Positives = 149/302 (49%)
Query: 18 TLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
TL GH + ++ F++ G +A+ S DK F GH +
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYT--------FRGHTAEI 180
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
L F+ S + + S D T +LWDV + + TL GH + + FN + +V+G+FD
Sbjct: 181 VCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFD 240
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
T +WDV +G+ + VL H ++ V FN D ++I T+S D C++WDA G C+ TL+
Sbjct: 241 HTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLL 300
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN--SKYCISSTFSV 254
N V V F+ G+ I + D T R+++ T + L GH SK C ++
Sbjct: 301 G-HNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNA---- 355
Query: 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314
G +++ S D +W +++ +Q LEGH+D + S A + + I +G+ DN T +
Sbjct: 356 -QGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDN--TCR 412
Query: 315 IW 316
IW
Sbjct: 413 IW 414
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 65/243 (26%), Positives = 120/243 (49%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN-PQSNMI 130
H ++++ F+ ++ S D+T ++WD + L TL GH N V+ + FN P + +
Sbjct: 91 HILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKV 150
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+G+FD+T ++W +TGKC H+ + + FN T++ T S D ++WD +G
Sbjct: 151 ATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGE 210
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ TL +S F+ G ++ G+ D+T LW+ +G+ + +GH C+
Sbjct: 211 EVSTLAGHFAEIISLC-FNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQF 269
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
+ + I + S D +W+ + + + L GH D V+ V + T +IA+ + D
Sbjct: 270 NWDCS---LIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGT 326
Query: 311 RTV 313
V
Sbjct: 327 SRV 329
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 63/200 (31%), Positives = 103/200 (51%)
Query: 121 VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD-GTMIVTSSYDG 179
V FN + ++G++D T +IWD +G+ L L H + V A+ FN G + T S+D
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDK 157
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
C++W A TG C T + + F+P + G++D T +LW+ +G+ + T
Sbjct: 158 TCKLWSAETGKCFYTF-RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLA 216
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH IS F+ T G +V+GS D LW++ S + V L GH + V +
Sbjct: 217 GHFAE--IISLCFNTT-GDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDC 273
Query: 300 NIIASGALDNDRTVKIWTQE 319
++IA+ +LD ++ K+W E
Sbjct: 274 SLIATASLD--KSCKVWDAE 291
Score = 267 (99.0 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 63/211 (29%), Positives = 101/211 (47%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH I S+ F+ G L + S D + +GH +S
Sbjct: 214 TLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRK--------VHVLSGHRGEIS 265
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ F+ D + +AS DK+ ++WD CL TL+GH + V V FN +I + + D
Sbjct: 266 CVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADG 325
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
T R++ T +CL L H ++ V FN G+ ++T+S D R+W TG C++ L +
Sbjct: 326 TSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVL-E 384
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ + F+ G I+ G+ DNT R+W+
Sbjct: 385 GHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 259 (96.2 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 54/166 (32%), Positives = 89/166 (53%)
Query: 151 KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP 210
+ L AH P+T V FN+ G+ +T SYD C+IWD ++G + TL N + +P
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 211 NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVY 270
G + G+ D T +LW+ TGK T+ GHT C++ F+ + +GS D+
Sbjct: 146 YGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLA--FN-PQSTLVATGSMDTTAK 202
Query: 271 LWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
LW+++S + V L GH +IS+ + T + + +G+ D+ T +W
Sbjct: 203 LWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDH--TAILW 246
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 90/299 (30%), Positives = 150/299 (50%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH A+ ++KF+ G L+AS S D+ GH+ + D
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKN-------FMVLKGHKNAILD 101
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L ++SD +VSAS DKT+R WDV T +K + H+++V C +I+SG+ D
Sbjct: 102 LHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDG 161
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
T ++WD++ ++ P +TAV F+ I T D ++WD G TL +
Sbjct: 162 TAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-E 219
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWN---YST-GKILKTYTGHTNS--KYCISST 251
++ + SP+G ++L +DN L +W+ Y+ + +K + GH ++ K + +
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 279
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
+S +G + +GS D V++W+ SR+ + KL GHT V HPTE II S + D +
Sbjct: 280 WS-PDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKN 337
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 69/266 (25%), Positives = 121/266 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH AI + ++ DG + S+S DK ++K H V+
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQ--------IKKMAEHSSFVNS 143
Query: 79 LVFSSDSR-FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ ++S SDD T +LWD+ ++T + V+F+ ++ I +G D
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDN 202
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG-LCRIWD----ASTGHCM 192
V++WD++ G+ L H D +T + + DG+ ++T+ D LC +WD A C+
Sbjct: 203 DVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLC-VWDMRPYAPQNRCV 261
Query: 193 KTLIDDE-NPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS-KYCI 248
K + N + +K +SP+G + G+ D + +W+ ++ + + GHT S C+
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECV 321
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWEL 274
F T I S S D +YL E+
Sbjct: 322 ---FHPTE-PIIGSCSSDKNIYLGEI 343
Score = 170 (64.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 45/173 (26%), Positives = 81/173 (46%)
Query: 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI-DDENPPVSFVKF 208
+ +L H V + FN GT+I + S+D +W G C ++ + + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHW 104
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDS 267
+ +G I+ + D T+R W+ TGK +K H++ ++S G I+SGS+D
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSF---VNSCCPTRRGPPLIISGSDDG 161
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
LW+++ R +Q + +V+ + I +G +DND VK+W K
Sbjct: 162 TAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDND--VKVWDLRK 211
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 82/265 (30%), Positives = 135/265 (50%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V TG C+K H + V V N+DGT++ + S D R+W +T
Sbjct: 208 VSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDEN-------------PPVSFVKFSPN------GKFILVGTLDNTLRLWNYST 231
C L + E+ P +S S N G F+L G+ D T+++W+ ST
Sbjct: 268 CKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDIST 327
Query: 232 GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
G L T GH N + G+++VS ++D + +W+ ++++ ++ L H V
Sbjct: 328 GMCLMTLVGHDN---WVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H + +G++D +TVK+W
Sbjct: 385 SLDFHKASPYVVTGSVD--QTVKVW 407
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 84/277 (30%), Positives = 132/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKT+++W+V T C+KT GH +V V N ++ S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F P G+F++ D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T + H + + S F + Y+V+GS D V +WE
Sbjct: 375 TLSAHEH--FVTSLDFHKAS-PYVVTGSVDQTVKVWE 408
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 73/264 (27%), Positives = 133/264 (50%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ +TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G + + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 -------STFSVTNGK----------YIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
T S G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V HP + S A +D+T++IW
Sbjct: 344 VLFHPGGRFVVSCA--DDKTLRIW 365
Score = 270 (100.1 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 73/250 (29%), Positives = 123/250 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D L S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQS------------N--------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S N ++SG+ D+T+++WD+ TG CL L H +
Sbjct: 281 CISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN--PPVSFVKFSPNGKFILV 217
V V F+ G +V+ + D RIWD CMKTL E+ + F K SP +++
Sbjct: 341 VRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASP---YVVT 397
Query: 218 GTLDNTLRLW 227
G++D T+++W
Sbjct: 398 GSVDQTVKVW 407
Score = 260 (96.6 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 63/198 (31%), Positives = 101/198 (51%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG LLAS S D+
Sbjct: 211 SRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFTGHEQG----VSDLVFSSDSR------FLVSASDDKTIRLWDVPTATC 107
++ + + +S+ S + + FL+S S DKTI++WD+ T C
Sbjct: 271 ELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+P +VS A D+T+RIWD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 ASPYVVTGSVDQTVKVWE 408
Score = 253 (94.1 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 66/221 (29%), Positives = 114/221 (51%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD + G + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F++ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W +TG +KT+TGH + +G + S S D V +W + +++
Sbjct: 211 SRDKTMKMWEVATGYCVKTFTGHREWVRMVRPN---QDGTLLASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPV--ISVA---SHPTENIIASGALDNDRTVK 314
+L H V IS A +HPT + A+G+ +N ++ K
Sbjct: 268 CKAELREHEHVVECISWAPESAHPTISE-ATGS-ENKKSGK 306
Score = 182 (69.1 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 30/80 (37%), Positives = 51/80 (63%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F RF+VS +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
S +V+G+ D+TV++W+ +
Sbjct: 391 ASPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 372 (136.0 bits), Expect = 6.9e-34, P = 6.9e-34
Identities = 84/256 (32%), Positives = 148/256 (57%)
Query: 66 LQKFTGHEQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
L+ GH GV +SS R ++S S D+T+++W+ T C+ TL GHT+ V C++
Sbjct: 294 LRTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 349
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + +VSG+ D T+R+WD++TG+CL VL H V V + DG +V+ +YD + ++
Sbjct: 350 HEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 405
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
WD T C+ TL N S ++F +G ++ G+LD ++R+W+ TG + T TGH +
Sbjct: 406 WDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 462
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG---HTDPVISVASHPTEN 300
++S + + +VSG+ DS V +W++++ + +Q L+G H V + + +N
Sbjct: 463 ----LTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN 515
Query: 301 IIASGALDNDRTVKIW 316
+ + + +D TVK+W
Sbjct: 516 FVITSS--DDGTVKLW 529
Score = 353 (129.3 bits), Expect = 9.4e-32, P = 9.4e-32
Identities = 78/246 (31%), Positives = 134/246 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V + +R +VS SDD T+++W T CL+TL+GHT V+ + N+I
Sbjct: 258 GHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNII 314
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T+++W+ +TG+C+ L H+ V + + +V+ S D R+WD TG
Sbjct: 315 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 372
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ L+ V V++ +G+ ++ G D +++W+ T L T GHTN Y +
Sbjct: 373 CLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ- 428
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G ++VSGS D+ + +W++++ + L GH ++ +NI+ SG D+
Sbjct: 429 -F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADS- 481
Query: 311 RTVKIW 316
TVKIW
Sbjct: 482 -TVKIW 486
Score = 324 (119.1 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 75/234 (32%), Positives = 130/234 (55%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+VS S D T+R+WD+ T CL L+GH V CV ++ +VSGA+D V++WD +T
Sbjct: 354 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE 411
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
CL L H++ V ++ F DG +V+ S D R+WD TG+C+ TL ++ S ++
Sbjct: 412 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGME 468
Query: 208 FSPNGKFILV-GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266
N ILV G D+T+++W+ TG+ L+T G +K+ + T N ++++ S+D
Sbjct: 469 LKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP--NKHQSAVTCLQFNKNFVITSSDD 523
Query: 267 SCVYLWELQSRKVVQKL----EGHTDPVI-SVASHPTENIIASGALDNDRTVKI 315
V LW+L++ + ++ L G + V+ + + T+ + A G+ + K+
Sbjct: 524 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 577
Score = 277 (102.6 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 70/239 (29%), Positives = 122/239 (51%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D++L+ + T TL GH + + H+ R++ S S D
Sbjct: 318 STDRTLKVWNAETGECIHTLYGHTSTVRCMHL-HEKRVV-SGSRD--------ATLRVWD 367
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L GH V + + D R +VS + D +++WD T TCL TL GHTN V+
Sbjct: 368 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+ +VSG+ D ++R+WDV+TG C+ L H + ++ +D ++V+ + D
Sbjct: 426 SLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDN-ILVSGNADS 481
Query: 180 LCRIWDASTGHCMKTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
+IWD TG C++TL + V+ ++F+ N F++ + D T++LW+ TG+ ++
Sbjct: 482 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIR 538
Score = 255 (94.8 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 64/185 (34%), Positives = 94/185 (50%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH+ A+ V++ DGR + S + D L GH V
Sbjct: 377 LMGHVAAVRCVQY--DGRRVVSGAYD--------FMVKVWDPETETCLHTLQGHTNRVYS 426
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
L F D +VS S D +IR+WDV T C+ TL GH + + + N++VSG D T
Sbjct: 427 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST 482
Query: 139 VRIWDVKTGKCLKVLPA---HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
V+IWD+KTG+CL+ L H VT + FN++ ++TSS DG ++WD TG ++ L
Sbjct: 483 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 540
Query: 196 IDDEN 200
+ E+
Sbjct: 541 VTLES 545
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 209 SP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
SP +I +D R + K+LK + H + C+ F G IVSGS+D+
Sbjct: 229 SPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVIT--CLQ--FC---GNRIVSGSDDN 281
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+ +W + K ++ L GHT V S S +NII SG+ DRT+K+W E
Sbjct: 282 TLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNIIISGS--TDRTLKVWNAE 329
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 372 (136.0 bits), Expect = 7.0e-34, P = 7.0e-34
Identities = 83/254 (32%), Positives = 147/254 (57%)
Query: 66 LQKFTGHEQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
L+ GH GV +SS R ++S S D+T+++W+ T C+ TL GHT+ V C++
Sbjct: 336 LRTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 391
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + +VSG+ D T+R+WD++TG+CL VL H V V + DG +V+ +YD + ++
Sbjct: 392 HEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 447
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
WD T C+ TL N S ++F +G ++ G+LD ++R+W+ TG + T TGH +
Sbjct: 448 WDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 504
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP-TENII 302
++S + + +VSG+ DS V +W++++ + +Q L+G + +V +N +
Sbjct: 505 ----LTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFV 559
Query: 303 ASGALDNDRTVKIW 316
+ + +D TVK+W
Sbjct: 560 ITSS--DDGTVKLW 571
Score = 353 (129.3 bits), Expect = 9.5e-32, P = 9.5e-32
Identities = 78/246 (31%), Positives = 134/246 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V + +R +VS SDD T+++W T CL+TL+GHT V+ + N+I
Sbjct: 300 GHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNII 356
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T+++W+ +TG+C+ L H+ V + + +V+ S D R+WD TG
Sbjct: 357 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 414
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ L+ V V++ +G+ ++ G D +++W+ T L T GHTN Y +
Sbjct: 415 CLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ- 470
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G ++VSGS D+ + +W++++ + L GH ++ +NI+ SG D+
Sbjct: 471 -F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADS- 523
Query: 311 RTVKIW 316
TVKIW
Sbjct: 524 -TVKIW 528
Score = 325 (119.5 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 70/197 (35%), Positives = 115/197 (58%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+VS S D T+R+WD+ T CL L+GH V CV ++ +VSGA+D V++WD +T
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE 453
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
CL L H++ V ++ F DG +V+ S D R+WD TG+C+ TL ++ S ++
Sbjct: 454 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGME 510
Query: 208 FSPNGKFILV-GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266
N ILV G D+T+++W+ TG+ L+T G SK+ + T N ++++ S+D
Sbjct: 511 LKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP--SKHQSAVTCLQFNKNFVITSSDD 565
Query: 267 SCVYLWELQSRKVVQKL 283
V LW+L++ + ++ L
Sbjct: 566 GTVKLWDLKTGEFIRNL 582
Score = 276 (102.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 70/239 (29%), Positives = 121/239 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D++L+ + T TL GH + + H+ R++ S S D
Sbjct: 360 STDRTLKVWNAETGECIHTLYGHTSTVRCMHL-HEKRVV-SGSRD--------ATLRVWD 409
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L GH V + + D R +VS + D +++WD T TCL TL GHTN V+
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+ +VSG+ D ++R+WDV+TG C+ L H + ++ +D ++V+ + D
Sbjct: 468 SLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDN-ILVSGNADS 523
Query: 180 LCRIWDASTGHCMKTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
+IWD TG C++TL V+ ++F+ N F++ + D T++LW+ TG+ ++
Sbjct: 524 TVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIR 580
Score = 257 (95.5 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 65/185 (35%), Positives = 96/185 (51%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH+ A+ V++ DGR + S + D L GH V
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYD--------FMVKVWDPETETCLHTLQGHTNRVYS 468
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
L F D +VS S D +IR+WDV T C+ TL GH + + + N++VSG D T
Sbjct: 469 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST 524
Query: 139 VRIWDVKTGKCLKVL--PA-HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
V+IWD+KTG+CL+ L P+ H VT + FN++ ++TSS DG ++WD TG ++ L
Sbjct: 525 VKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 582
Query: 196 IDDEN 200
+ E+
Sbjct: 583 VTLES 587
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 209 SP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
SP +I +D R + K+LK + H + C+ F G IVSGS+D+
Sbjct: 271 SPWKSAYIRQHRIDTNWRRGELRSPKVLKGHDDHVIT--CLQ--FC---GNRIVSGSDDN 323
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+ +W + K ++ L GHT V S S +NII SG+ DRT+K+W E
Sbjct: 324 TLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNIIISGS--TDRTLKVWNAE 371
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 86/301 (28%), Positives = 149/301 (49%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH A+ + +F+ DG + D+ ++ + H + V D
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGIL--------IKTYKSHGREVRD 65
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ +SD+ S D+ + WDV T ++ GH V V FN S+++VS FD +
Sbjct: 66 VHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRS 125
Query: 139 VRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
+R+WD ++ ++++ D V +V + T I+ S DG R +D G M
Sbjct: 126 LRVWDCRSHSVEPVQIIDTFLDTVMSVVLTK--TEIIGGSVDGTVRTFDMRIGREMS--- 180
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256
D+ PV+ + S +G +L G LD+TLRL + +TG++L+ Y GH + + + +TN
Sbjct: 181 DNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSF--KTDCCLTN 238
Query: 257 GK-YIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKI 315
+++ GSED V+ W+L KV+ K H V SV+ HP E+ + + ++D T+++
Sbjct: 239 SDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDG--TIRV 296
Query: 316 W 316
W
Sbjct: 297 W 297
Score = 155 (59.6 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 45/159 (28%), Positives = 70/159 (44%)
Query: 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN 211
+L H V A FN DG +T D R+W+ G +KT S N
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 212 GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
KF G D + W+ STG++++ + GH + F+ + +VS D + +
Sbjct: 73 AKFCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNAVK--FN-DSSSVVVSAGFDRSLRV 128
Query: 272 WELQSRKV--VQKLEGHTDPVISVASHPTENIIASGALD 308
W+ +S V VQ ++ D V+SV TE I G++D
Sbjct: 129 WDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGSVD 165
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 372 (136.0 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 84/256 (32%), Positives = 148/256 (57%)
Query: 66 LQKFTGHEQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
L+ GH GV +SS R ++S S D+T+++W+ T C+ TL GHT+ V C++
Sbjct: 334 LRTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 389
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + +VSG+ D T+R+WD++TG+CL VL H V V + DG +V+ +YD + ++
Sbjct: 390 HEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 445
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
WD T C+ TL N S ++F +G ++ G+LD ++R+W+ TG + T TGH +
Sbjct: 446 WDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 502
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG---HTDPVISVASHPTEN 300
++S + + +VSG+ DS V +W++++ + +Q L+G H V + + +N
Sbjct: 503 ----LTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN 555
Query: 301 IIASGALDNDRTVKIW 316
+ + + +D TVK+W
Sbjct: 556 FVITSS--DDGTVKLW 569
Score = 353 (129.3 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 78/246 (31%), Positives = 134/246 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V + +R +VS SDD T+++W T CL+TL+GHT V+ + N+I
Sbjct: 298 GHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNII 354
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T+++W+ +TG+C+ L H+ V + + +V+ S D R+WD TG
Sbjct: 355 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 412
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ L+ V V++ +G+ ++ G D +++W+ T L T GHTN Y +
Sbjct: 413 CLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ- 468
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G ++VSGS D+ + +W++++ + L GH ++ +NI+ SG D+
Sbjct: 469 -F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADS- 521
Query: 311 RTVKIW 316
TVKIW
Sbjct: 522 -TVKIW 526
Score = 324 (119.1 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 75/234 (32%), Positives = 130/234 (55%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+VS S D T+R+WD+ T CL L+GH V CV ++ +VSGA+D V++WD +T
Sbjct: 394 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE 451
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
CL L H++ V ++ F DG +V+ S D R+WD TG+C+ TL ++ S ++
Sbjct: 452 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGME 508
Query: 208 FSPNGKFILV-GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266
N ILV G D+T+++W+ TG+ L+T G +K+ + T N ++++ S+D
Sbjct: 509 LKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP--NKHQSAVTCLQFNKNFVITSSDD 563
Query: 267 SCVYLWELQSRKVVQKL----EGHTDPVI-SVASHPTENIIASGALDNDRTVKI 315
V LW+L++ + ++ L G + V+ + + T+ + A G+ + K+
Sbjct: 564 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 617
Score = 277 (102.6 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 70/239 (29%), Positives = 122/239 (51%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D++L+ + T TL GH + + H+ R++ S S D
Sbjct: 358 STDRTLKVWNAETGECIHTLYGHTSTVRCMHL-HEKRVV-SGSRD--------ATLRVWD 407
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L GH V + + D R +VS + D +++WD T TCL TL GHTN V+
Sbjct: 408 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+ +VSG+ D ++R+WDV+TG C+ L H + ++ +D ++V+ + D
Sbjct: 466 SLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDN-ILVSGNADS 521
Query: 180 LCRIWDASTGHCMKTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
+IWD TG C++TL + V+ ++F+ N F++ + D T++LW+ TG+ ++
Sbjct: 522 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIR 578
Score = 255 (94.8 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 64/185 (34%), Positives = 94/185 (50%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH+ A+ V++ DGR + S + D L GH V
Sbjct: 417 LMGHVAAVRCVQY--DGRRVVSGAYD--------FMVKVWDPETETCLHTLQGHTNRVYS 466
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
L F D +VS S D +IR+WDV T C+ TL GH + + + N++VSG D T
Sbjct: 467 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST 522
Query: 139 VRIWDVKTGKCLKVLPA---HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
V+IWD+KTG+CL+ L H VT + FN++ ++TSS DG ++WD TG ++ L
Sbjct: 523 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 580
Query: 196 IDDEN 200
+ E+
Sbjct: 581 VTLES 585
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 209 SP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
SP +I +D R + K+LK + H + C+ F G IVSGS+D+
Sbjct: 269 SPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVIT--CLQ--FC---GNRIVSGSDDN 321
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+ +W + K ++ L GHT V S S +NII SG+ DRT+K+W E
Sbjct: 322 TLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNIIISGS--TDRTLKVWNAE 369
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 372 (136.0 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 83/254 (32%), Positives = 147/254 (57%)
Query: 66 LQKFTGHEQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
L+ GH GV +SS R ++S S D+T+++W+ T C+ TL GHT+ V C++
Sbjct: 336 LRTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 391
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + +VSG+ D T+R+WD++TG+CL VL H V V + DG +V+ +YD + ++
Sbjct: 392 HEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 447
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
WD T C+ TL N S ++F +G ++ G+LD ++R+W+ TG + T TGH +
Sbjct: 448 WDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 504
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP-TENII 302
++S + + +VSG+ DS V +W++++ + +Q L+G + +V +N +
Sbjct: 505 ----LTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFV 559
Query: 303 ASGALDNDRTVKIW 316
+ + +D TVK+W
Sbjct: 560 ITSS--DDGTVKLW 571
Score = 353 (129.3 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 78/246 (31%), Positives = 134/246 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V + +R +VS SDD T+++W T CL+TL+GHT V+ + N+I
Sbjct: 300 GHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNII 356
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T+++W+ +TG+C+ L H+ V + + +V+ S D R+WD TG
Sbjct: 357 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 414
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ L+ V V++ +G+ ++ G D +++W+ T L T GHTN Y +
Sbjct: 415 CLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ- 470
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G ++VSGS D+ + +W++++ + L GH ++ +NI+ SG D+
Sbjct: 471 -F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADS- 523
Query: 311 RTVKIW 316
TVKIW
Sbjct: 524 -TVKIW 528
Score = 327 (120.2 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 76/234 (32%), Positives = 130/234 (55%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+VS S D T+R+WD+ T CL L+GH V CV ++ +VSGA+D V++WD +T
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE 453
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
CL L H++ V ++ F DG +V+ S D R+WD TG+C+ TL ++ S ++
Sbjct: 454 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGME 510
Query: 208 FSPNGKFILV-GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266
N ILV G D+T+++W+ TG+ L+T G SK+ + T N ++++ S+D
Sbjct: 511 LKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP--SKHQSAVTCLQFNKNFVITSSDD 565
Query: 267 SCVYLWELQSRKVVQKL----EGHTDPVI-SVASHPTENIIASGALDNDRTVKI 315
V LW+L++ + ++ L G + V+ + + T+ + A G+ + K+
Sbjct: 566 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 619
Score = 276 (102.2 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 70/239 (29%), Positives = 121/239 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D++L+ + T TL GH + + H+ R++ S S D
Sbjct: 360 STDRTLKVWNAETGECIHTLYGHTSTVRCMHL-HEKRVV-SGSRD--------ATLRVWD 409
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L GH V + + D R +VS + D +++WD T TCL TL GHTN V+
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+ +VSG+ D ++R+WDV+TG C+ L H + ++ +D ++V+ + D
Sbjct: 468 SLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDN-ILVSGNADS 523
Query: 180 LCRIWDASTGHCMKTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
+IWD TG C++TL V+ ++F+ N F++ + D T++LW+ TG+ ++
Sbjct: 524 TVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIR 580
Score = 257 (95.5 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 65/185 (35%), Positives = 96/185 (51%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH+ A+ V++ DGR + S + D L GH V
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYD--------FMVKVWDPETETCLHTLQGHTNRVYS 468
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
L F D +VS S D +IR+WDV T C+ TL GH + + + N++VSG D T
Sbjct: 469 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST 524
Query: 139 VRIWDVKTGKCLKVL--PA-HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
V+IWD+KTG+CL+ L P+ H VT + FN++ ++TSS DG ++WD TG ++ L
Sbjct: 525 VKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 582
Query: 196 IDDEN 200
+ E+
Sbjct: 583 VTLES 587
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 209 SP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
SP +I +D R + K+LK + H + C+ F G IVSGS+D+
Sbjct: 271 SPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVIT--CLQ--FC---GNRIVSGSDDN 323
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+ +W + K ++ L GHT V S S +NII SG+ DRT+K+W E
Sbjct: 324 TLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNIIISGS--TDRTLKVWNAE 371
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 344 (126.2 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 79/266 (29%), Positives = 132/266 (49%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
L +F+P+ GH ++SV+FS G LLAS+S D+
Sbjct: 44 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK--------F 95
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+F H V + FS+D +FL +AS+DK+I++W + L +L HT++V C F+P
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD 155
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+IVS + D+T++IWD +C+ VDFN GT I ++ D ++WD
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV 215
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
++ + V+ + F P+G +++ + D TL++ + G+++ T GHT +
Sbjct: 216 RVNKLLQHY-QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF 274
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLW 272
+S FS G+ SG D+ V LW
Sbjct: 275 TVS--FS-KGGELFASGGADTQVLLW 297
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 84/302 (27%), Positives = 142/302 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L + GH AI+S+ S +G+ LA++S D ++ GH+
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAY--------RYVGHKD 61
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V+ + FS L SAS D+T+RLW HT V V+F+ + + +
Sbjct: 62 VVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATAS 121
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D+++++W + + L L H+ V F+ DG +IV+ S D +IWD + C+
Sbjct: 122 EDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254
D +FV F+P+G I D T+++W+ K+L+ Y H+ CIS F
Sbjct: 182 FSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS--FH- 237
Query: 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314
+G Y+++ S D + + +L +++ L+GHT PV +V+ + ASG D V
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQ--VL 295
Query: 315 IW 316
+W
Sbjct: 296 LW 297
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
++ + SPNGK + + D L LWN+ Y GH K ++S +G + S
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGH---KDVVTSVQFSPHGNLLAS 77
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
S D V LW R + + HT PV SV +A+ + D+++K+W+ ++
Sbjct: 78 ASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATAS--EDKSIKVWSMYRQ 134
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 234 ILKTY-TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
+L+ Y GH K I+S NGK + + S D+ + LW + + GH D V S
Sbjct: 9 VLERYFKGH---KAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 293 VASHPTENIIASGALDNDRTVKIWTQEK 320
V P N++AS + DRTV++W +K
Sbjct: 66 VQFSPHGNLLASAS--RDRTVRLWIPDK 91
Score = 38 (18.4 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 249 SSTFSVTNGKYIVSGSEDSCVY 270
S+T + T+G+ + E++C Y
Sbjct: 369 STTTTETSGRTLPDKGEEACGY 390
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 344 (126.2 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 79/266 (29%), Positives = 132/266 (49%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
L +F+P+ GH ++SV+FS G LLAS+S D+
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK--------F 53
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+F H V + FS+D +FL +AS+DK+I++W + L +L HT++V C F+P
Sbjct: 54 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD 113
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+IVS + D+T++IWD +C+ VDFN GT I ++ D ++WD
Sbjct: 114 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV 173
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
++ + V+ + F P+G +++ + D TL++ + G+++ T GHT +
Sbjct: 174 RVNKLLQHY-QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF 232
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLW 272
+S FS G+ SG D+ V LW
Sbjct: 233 TVS--FS-KGGELFASGGADTQVLLW 255
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 72/249 (28%), Positives = 123/249 (49%)
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
++ GH+ V+ + FS L SAS D+T+RLW HT V V+F+
Sbjct: 13 RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG 72
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+ + + D+++++W + + L L H+ V F+ DG +IV+ S D +IWD +
Sbjct: 73 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 132
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
C+ D +FV F+P+G I D T+++W+ K+L+ Y H+ C
Sbjct: 133 NKQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 191
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
IS F +G Y+++ S D + + +L +++ L+GHT PV +V+ + ASG
Sbjct: 192 IS--FH-PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGA 248
Query: 308 DNDRTVKIW 316
D V +W
Sbjct: 249 DTQ--VLLW 255
Score = 38 (18.4 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 249 SSTFSVTNGKYIVSGSEDSCVY 270
S+T + T+G+ + E++C Y
Sbjct: 327 STTTTETSGRTLPDKGEEACGY 348
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 374 (136.7 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 83/254 (32%), Positives = 145/254 (57%)
Query: 66 LQKFTGHEQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
L+ GH GV +SS R ++S S D+T+++W+ T C+ TL GHT+ V C++
Sbjct: 467 LRTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 522
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + +VSG+ D T+R+WD++TG+CL VL H V V + DG +V+ +YD + ++
Sbjct: 523 HEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 578
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
WD T C+ TL N S ++F +G ++ G+LD ++R+W+ TG + T TGH +
Sbjct: 579 WDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 635
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG-HTDPVISVASHPTENII 302
++S + + +VSG+ DS V +W++++ + +Q L+G H +N +
Sbjct: 636 ----LTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFV 690
Query: 303 ASGALDNDRTVKIW 316
+ + +D TVK+W
Sbjct: 691 ITSS--DDGTVKLW 702
Score = 353 (129.3 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 78/246 (31%), Positives = 134/246 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V + +R +VS SDD T+++W T CL+TL+GHT V+ + N+I
Sbjct: 431 GHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNII 487
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T+++W+ +TG+C+ L H+ V + + +V+ S D R+WD TG
Sbjct: 488 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 545
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ L+ V V++ +G+ ++ G D +++W+ T L T GHTN Y +
Sbjct: 546 CLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ- 601
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G ++VSGS D+ + +W++++ + L GH ++ +NI+ SG D+
Sbjct: 602 -F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADS- 654
Query: 311 RTVKIW 316
TVKIW
Sbjct: 655 -TVKIW 659
Score = 323 (118.8 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 76/237 (32%), Positives = 131/237 (55%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+VS S D T+R+WD+ T CL L+GH V CV ++ +VSGA+D V++WD +T
Sbjct: 527 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE 584
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
CL L H++ V ++ F DG +V+ S D R+WD TG+C+ TL ++ S ++
Sbjct: 585 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGME 641
Query: 208 FSPNGKFILV-GTLDNTLRLWNYSTGKILKTYTG---HTNSKYCISSTFSVTNGKYIVSG 263
N ILV G D+T+++W+ TG+ L+T G H ++ C+ F N ++++
Sbjct: 642 LKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQ--F---NKNFVITS 693
Query: 264 SEDSCVYLWELQSRKVVQKL----EGHTDPVI-SVASHPTENIIASGALDNDRTVKI 315
S+D V LW+L++ + ++ L G + V+ + + T+ + A G+ + K+
Sbjct: 694 SDDGTVKLWDLRTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 750
Score = 274 (101.5 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 70/239 (29%), Positives = 121/239 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D++L+ + T TL GH + + H+ R++ S S D
Sbjct: 491 STDRTLKVWNAETGECIHTLYGHTSTVRCMHL-HEKRVV-SGSRD--------ATLRVWD 540
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L GH V + + D R +VS + D +++WD T TCL TL GHTN V+
Sbjct: 541 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 598
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+ +VSG+ D ++R+WDV+TG C+ L H + ++ +D ++V+ + D
Sbjct: 599 SLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDN-ILVSGNADS 654
Query: 180 LCRIWDASTGHCMKTLIDDEN--PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
+IWD TG C++TL V+ ++F+ N F++ + D T++LW+ TG+ ++
Sbjct: 655 TVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRTGEFIR 711
Score = 254 (94.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 64/185 (34%), Positives = 94/185 (50%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH+ A+ V++ DGR + S + D L GH V
Sbjct: 550 LMGHVAAVRCVQY--DGRRVVSGAYD--------FMVKVWDPETETCLHTLQGHTNRVYS 599
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
L F D +VS S D +IR+WDV T C+ TL GH + + + N++VSG D T
Sbjct: 600 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST 655
Query: 139 VRIWDVKTGKCLKVLPA---HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
V+IWD+KTG+CL+ L H VT + FN++ ++TSS DG ++WD TG ++ L
Sbjct: 656 VKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRTGEFIRNL 713
Query: 196 IDDEN 200
+ E+
Sbjct: 714 VTLES 718
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 38/112 (33%), Positives = 57/112 (50%)
Query: 209 SP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
SP +I +D R + + K+LK + H + C+ F G IVSGS+D+
Sbjct: 402 SPWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVIT--CLQ--FC---GNRIVSGSDDN 454
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+ +W + K ++ L GHT V S S +NII SG+ DRT+K+W E
Sbjct: 455 TLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNIIISGS--TDRTLKVWNAE 502
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 369 (135.0 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 87/257 (33%), Positives = 141/257 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTN-----YVFCVNFNPQ 126
H V + FS+D ++L + + ++ +++DV T + + + Y+ V F+P
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
N + +GA D+TV++WD+ T K H + ++D++ DG IV+ S D +IWD
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 187 STGHCMKTLIDDENPP---VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
G C TL ++E P V+ V SP+G+ + G+LDN +RLW+ TG L+ Y GH +
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLD 458
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWEL---QSRKVVQK-LEGHTDPVISVASHPTE 299
S Y ++ FS +GK + SGS D + LW+L +SR + GH D V+SVA P
Sbjct: 459 SVYSVA--FS-PDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDG 515
Query: 300 NIIASGALDNDRTVKIW 316
+ + SG+ DR+V+ W
Sbjct: 516 SWLISGS--KDRSVQFW 530
Score = 311 (114.5 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 26 ISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVFSSDS 85
I SV FS DG LA+ + DK F GHE + L +SSD
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHT--------FYGHELDIYSLDYSSDG 381
Query: 86 RFLVSASDDKTIRLWDVPTATCLKTL----IGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
RF+VS S DK ++WD+ C TL +G N V V +P ++ +G+ D VR+
Sbjct: 382 RFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRL 441
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS----TGHCMKTLID 197
WD +TG L+ H D V +V F+ DG + + S D ++WD S C T
Sbjct: 442 WDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNG 501
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNG 257
++ +S V FSP+G +++ G+ D +++ W+ G GH NS IS S N
Sbjct: 502 HKDFVLS-VAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNS--VISVALSPKNN 558
Query: 258 KYIV--SGSEDSCVYLWELQS 276
+ V +GS D LW+ S
Sbjct: 559 SHGVFATGSGDFRSRLWKYDS 579
Score = 252 (93.8 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 67/240 (27%), Positives = 110/240 (45%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
+ D++++ + +T + T GH I S+ +S DGR + S S DK
Sbjct: 346 AEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAF 405
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
+ G + GV+ + S D R + + S D +RLWD T L+ GH + V+
Sbjct: 406 TLGNEEV----GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVY 461
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVK----TGKCLKVLPAHSDPVTAVDFNRDGTMIVTS 175
V F+P + SG+ D+++++WD+ +C H D V +V F+ DG+ +++
Sbjct: 462 SVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISG 521
Query: 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP----NGKFILVGTLDNTLRLWNYST 231
S D + WD G L +N +S V SP +G F G+ D RLW Y +
Sbjct: 522 SKDRSVQFWDPRNGTTHMMLQGHKNSVIS-VALSPKNNSHGVFA-TGSGDFRSRLWKYDS 579
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 86/273 (31%), Positives = 132/273 (48%)
Query: 1 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
M S + +P + GH A++ V FS G LLAS S DK
Sbjct: 39 MDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 98
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC 120
F H V + F SD + LV+ASDDKT+++W L +L H N+V C
Sbjct: 99 --------FRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRC 150
Query: 121 VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGL 180
F+P +IVS + D+TV++WD + +C+ H VT VDF+ GT I + D
Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT 210
Query: 181 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240
++WDA T H + + V+ + F P+G +++ + D+TL++ + G++L T G
Sbjct: 211 VKVWDART-HRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
H ++ FS T G+Y SG D V +W+
Sbjct: 270 HQGPATTVA--FSRT-GEYFASGGSDEQVMVWK 299
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 89/304 (29%), Positives = 149/304 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + GH A++ V FS + + LAS S D +FTGH+
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAY--------RFTGHK 61
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
V+ + FS L S S DKT+R+W VP T+ HT V V+F +V+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVT 120
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D+TV++W + L L H + V F+ DG +IV++S D ++WD ++ C+
Sbjct: 121 ASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECI 180
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ + V++V F P+G I +DNT+++W+ T ++L+ Y H+ + +S F
Sbjct: 181 HSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALS--F 237
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G Y+++ S DS + + +L +++ L GH P +VA T ASG +D
Sbjct: 238 H-PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG--SDEQ 294
Query: 313 VKIW 316
V +W
Sbjct: 295 VMVW 298
Score = 181 (68.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/170 (25%), Positives = 76/170 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L H+ + KFS DGRL+ S+S DK + + H V+
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC--------IHSYCEHGGFVT 191
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ F + +A D T+++WD T L+ H+ V ++F+P N +++ + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDS 251
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
T++I D+ G+ L L H P T V F+R G + D +W ++
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
V+ V FS N K + G++D+TL +W+ +TGH ++ C++ FS +G + S
Sbjct: 22 VTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN--FS-PSGHLLAS 78
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
GS D V +W + HT V SV H + + +D+TVK+W+ ++
Sbjct: 79 GSRDKTVRIWVPNVKGESTVFRAHTATVRSV--HFCSDGQSLVTASDDKTVKVWSTHRQ 135
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 372 (136.0 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 84/256 (32%), Positives = 148/256 (57%)
Query: 66 LQKFTGHEQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
L+ GH GV +SS R ++S S D+T+++W+ T C+ TL GHT+ V C++
Sbjct: 414 LRTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 469
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + +VSG+ D T+R+WD++TG+CL VL H V V + DG +V+ +YD + ++
Sbjct: 470 HEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 525
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
WD T C+ TL N S ++F +G ++ G+LD ++R+W+ TG + T TGH +
Sbjct: 526 WDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 582
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG---HTDPVISVASHPTEN 300
++S + + +VSG+ DS V +W++++ + +Q L+G H V + + +N
Sbjct: 583 ----LTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN 635
Query: 301 IIASGALDNDRTVKIW 316
+ + + +D TVK+W
Sbjct: 636 FVITSS--DDGTVKLW 649
Score = 353 (129.3 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 78/246 (31%), Positives = 134/246 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V + +R +VS SDD T+++W T CL+TL+GHT V+ + N+I
Sbjct: 378 GHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNII 434
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T+++W+ +TG+C+ L H+ V + + +V+ S D R+WD TG
Sbjct: 435 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 492
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ L+ V V++ +G+ ++ G D +++W+ T L T GHTN Y +
Sbjct: 493 CLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ- 548
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G ++VSGS D+ + +W++++ + L GH ++ +NI+ SG D+
Sbjct: 549 -F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADS- 601
Query: 311 RTVKIW 316
TVKIW
Sbjct: 602 -TVKIW 606
Score = 324 (119.1 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 75/234 (32%), Positives = 130/234 (55%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+VS S D T+R+WD+ T CL L+GH V CV ++ +VSGA+D V++WD +T
Sbjct: 474 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE 531
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
CL L H++ V ++ F DG +V+ S D R+WD TG+C+ TL ++ S ++
Sbjct: 532 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGME 588
Query: 208 FSPNGKFILV-GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266
N ILV G D+T+++W+ TG+ L+T G +K+ + T N ++++ S+D
Sbjct: 589 LKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP--NKHQSAVTCLQFNKNFVITSSDD 643
Query: 267 SCVYLWELQSRKVVQKL----EGHTDPVI-SVASHPTENIIASGALDNDRTVKI 315
V LW+L++ + ++ L G + V+ + + T+ + A G+ + K+
Sbjct: 644 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 697
Score = 277 (102.6 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 70/239 (29%), Positives = 122/239 (51%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D++L+ + T TL GH + + H+ R++ S S D
Sbjct: 438 STDRTLKVWNAETGECIHTLYGHTSTVRCMHL-HEKRVV-SGSRD--------ATLRVWD 487
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L GH V + + D R +VS + D +++WD T TCL TL GHTN V+
Sbjct: 488 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+ +VSG+ D ++R+WDV+TG C+ L H + ++ +D ++V+ + D
Sbjct: 546 SLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDN-ILVSGNADS 601
Query: 180 LCRIWDASTGHCMKTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
+IWD TG C++TL + V+ ++F+ N F++ + D T++LW+ TG+ ++
Sbjct: 602 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIR 658
Score = 255 (94.8 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 64/185 (34%), Positives = 94/185 (50%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH+ A+ V++ DGR + S + D L GH V
Sbjct: 497 LMGHVAAVRCVQY--DGRRVVSGAYD--------FMVKVWDPETETCLHTLQGHTNRVYS 546
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
L F D +VS S D +IR+WDV T C+ TL GH + + + N++VSG D T
Sbjct: 547 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST 602
Query: 139 VRIWDVKTGKCLKVLPA---HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
V+IWD+KTG+CL+ L H VT + FN++ ++TSS DG ++WD TG ++ L
Sbjct: 603 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 660
Query: 196 IDDEN 200
+ E+
Sbjct: 661 VTLES 665
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 209 SP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
SP +I +D R + K+LK + H + C+ F G IVSGS+D+
Sbjct: 349 SPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVIT--CLQ--FC---GNRIVSGSDDN 401
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+ +W + K ++ L GHT V S S +NII SG+ DRT+K+W E
Sbjct: 402 TLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNIIISGS--TDRTLKVWNAE 449
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 372 (136.0 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 84/256 (32%), Positives = 148/256 (57%)
Query: 66 LQKFTGHEQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
L+ GH GV +SS R ++S S D+T+++W+ T C+ TL GHT+ V C++
Sbjct: 419 LRTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 474
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + +VSG+ D T+R+WD++TG+CL VL H V V + DG +V+ +YD + ++
Sbjct: 475 HEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 530
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
WD T C+ TL N S ++F +G ++ G+LD ++R+W+ TG + T TGH +
Sbjct: 531 WDPETETCLHTLQGHTNRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 587
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG---HTDPVISVASHPTEN 300
++S + + +VSG+ DS V +W++++ + +Q L+G H V + + +N
Sbjct: 588 ----LTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN 640
Query: 301 IIASGALDNDRTVKIW 316
+ + + +D TVK+W
Sbjct: 641 FVITSS--DDGTVKLW 654
Score = 353 (129.3 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 78/246 (31%), Positives = 134/246 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V + +R +VS SDD T+++W T CL+TL+GHT V+ + N+I
Sbjct: 383 GHDDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNII 439
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T+++W+ +TG+C+ L H+ V + + +V+ S D R+WD TG
Sbjct: 440 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQ 497
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ L+ V V++ +G+ ++ G D +++W+ T L T GHTN Y +
Sbjct: 498 CLHVLMGHV-AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ- 553
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G ++VSGS D+ + +W++++ + L GH ++ +NI+ SG D+
Sbjct: 554 -F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADS- 606
Query: 311 RTVKIW 316
TVKIW
Sbjct: 607 -TVKIW 611
Score = 324 (119.1 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 75/234 (32%), Positives = 130/234 (55%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+VS S D T+R+WD+ T CL L+GH V CV ++ +VSGA+D V++WD +T
Sbjct: 479 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETE 536
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
CL L H++ V ++ F DG +V+ S D R+WD TG+C+ TL ++ S ++
Sbjct: 537 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGME 593
Query: 208 FSPNGKFILV-GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266
N ILV G D+T+++W+ TG+ L+T G +K+ + T N ++++ S+D
Sbjct: 594 LKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP--NKHQSAVTCLQFNKNFVITSSDD 648
Query: 267 SCVYLWELQSRKVVQKL----EGHTDPVI-SVASHPTENIIASGALDNDRTVKI 315
V LW+L++ + ++ L G + V+ + + T+ + A G+ + K+
Sbjct: 649 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 702
Score = 277 (102.6 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 70/239 (29%), Positives = 122/239 (51%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D++L+ + T TL GH + + H+ R++ S S D
Sbjct: 443 STDRTLKVWNAETGECIHTLYGHTSTVRCMHL-HEKRVV-SGSRD--------ATLRVWD 492
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L GH V + + D R +VS + D +++WD T TCL TL GHTN V+
Sbjct: 493 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+ +VSG+ D ++R+WDV+TG C+ L H + ++ +D ++V+ + D
Sbjct: 551 SLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDN-ILVSGNADS 606
Query: 180 LCRIWDASTGHCMKTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
+IWD TG C++TL + V+ ++F+ N F++ + D T++LW+ TG+ ++
Sbjct: 607 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIR 663
Score = 255 (94.8 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 64/185 (34%), Positives = 94/185 (50%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH+ A+ V++ DGR + S + D L GH V
Sbjct: 502 LMGHVAAVRCVQY--DGRRVVSGAYD--------FMVKVWDPETETCLHTLQGHTNRVYS 551
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
L F D +VS S D +IR+WDV T C+ TL GH + + + N++VSG D T
Sbjct: 552 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST 607
Query: 139 VRIWDVKTGKCLKVLPA---HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
V+IWD+KTG+CL+ L H VT + FN++ ++TSS DG ++WD TG ++ L
Sbjct: 608 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRNL 665
Query: 196 IDDEN 200
+ E+
Sbjct: 666 VTLES 670
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 209 SP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
SP +I +D R + K+LK + H + C+ F G IVSGS+D+
Sbjct: 354 SPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVIT--CLQ--FC---GNRIVSGSDDN 406
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+ +W + K ++ L GHT V S S +NII SG+ DRT+K+W E
Sbjct: 407 TLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNIIISGS--TDRTLKVWNAE 454
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 85/273 (31%), Positives = 131/273 (47%)
Query: 1 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
M S + +P + GH A++ V FS G LLAS S DK
Sbjct: 39 MDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 98
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC 120
F H V + F SD + LV+ASDDKT+++W L +L H N+V C
Sbjct: 99 --------FRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRC 150
Query: 121 VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGL 180
F+P +IVS + D+TV++WD + +C+ H VT VDF+ GT I + D
Sbjct: 151 AKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT 210
Query: 181 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240
++WD T H + + V+ + F P+G +++ + D+TL++ + G++L T G
Sbjct: 211 VKVWDTRT-HRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
H ++ FS T G+Y SG D V +W+
Sbjct: 270 HQGPATTVA--FSRT-GEYFASGGSDEQVMVWK 299
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 88/304 (28%), Positives = 150/304 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + GH A++ V FS + + LAS S D +FTGH+
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAY--------RFTGHK 61
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
V+ + FS L S S DKT+R+W VP T+ HT V V+F ++V+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVT 120
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D+TV++W + L L H + V F+ DG +IV++S D ++WD ++ C+
Sbjct: 121 ASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ + V++V F P+G I +DNT+++W+ T ++++ Y H+ + +S F
Sbjct: 181 HSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALS--F 237
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G Y+++ S DS + + +L +++ L GH P +VA T ASG +D
Sbjct: 238 H-PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG--SDEQ 294
Query: 313 VKIW 316
V +W
Sbjct: 295 VMVW 298
Score = 177 (67.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 43/170 (25%), Positives = 76/170 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L H+ + KFS DGRL+ S+S DK + + H V+
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC--------VHSYCEHGGFVT 191
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ F + +A D T+++WD T ++ H+ V ++F+P N +++ + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDS 251
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
T++I D+ G+ L L H P T V F+R G + D +W ++
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 139 (54.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
V+ V FS N K + G++D+TL +W+ +TGH ++ C++ FS +G + S
Sbjct: 22 VTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN--FS-PSGHLLAS 78
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
GS D V +W + HT V SV ++ + + +D+TVK+W+ ++
Sbjct: 79 GSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTAS--DDKTVKVWSTHRQ 135
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 366 (133.9 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 94/317 (29%), Positives = 153/317 (48%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L TL H + V+FS DG+ +A+ ++ TG +
Sbjct: 292 LVHTLQ-HESVVCCVRFSADGKYVATG-CNRSAQIFDVNTGEKVCVLQDDNADT-TG-DL 347
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
+ + FS D ++L + ++DK IR+WD+ T T GH ++ ++F I SG+
Sbjct: 348 YIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGS 407
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D TVR+WD++ G L V D VT V + D + S D R+WD + G ++
Sbjct: 408 GDRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVER 466
Query: 195 LI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST------------GKILKTYTG 240
L D V V FSPNG+ ++ G+LD T++LW +T G+ +KT+ G
Sbjct: 467 LEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEG 526
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN 300
H + + +S + N ++++SGS+D V W+ ++ L+GH + VISVA PT
Sbjct: 527 HRD--FVLSVALTPDN-QWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGG 583
Query: 301 IIASGALDNDRTVKIWT 317
A+G+ D +IW+
Sbjct: 584 FFATGS--GDMRARIWS 598
Score = 254 (94.5 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 68/226 (30%), Positives = 110/226 (48%)
Query: 21 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV 80
GH + I S+ F+ DGR +AS S D+ L FT E GV+ +
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTA--------LTVFT-IEDGVTTVA 436
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATC----LKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S D++++ + S DK++R+WD+ T C L+ GH + V+ V F+P +V+G+ D
Sbjct: 437 ISPDTKYVAAGSLDKSVRVWDL-TQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLD 495
Query: 137 ETVRIWDVKT------------GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+T+++W++ T G+C+K H D V +V D +++ S D + W
Sbjct: 496 KTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFW 555
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
D TG L +N +S V SP G F G+ D R+W+Y+
Sbjct: 556 DPRTGSTQLMLQGHKNSVIS-VAPSPTGGFFATGSGDMRARIWSYT 600
Score = 191 (72.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 55/188 (29%), Positives = 94/188 (50%)
Query: 135 FDETV-RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
F++ V R+ DV L+ H V V F+ DG + T + +I+D +TG +
Sbjct: 280 FNQAVPRVLDVDLVHTLQ----HESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVC 334
Query: 194 TLIDDENPPVS--FVK---FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
L DD +++ FSP+GK++ G D +R+W+ +T I + GH Y +
Sbjct: 335 VLQDDNADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSL 394
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
F+ +G+ I SGS D V LW++++ + D V +VA P +A+G+LD
Sbjct: 395 D--FA-RDGRTIASGSGDRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLD 450
Query: 309 NDRTVKIW 316
++V++W
Sbjct: 451 --KSVRVW 456
Score = 144 (55.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 34/120 (28%), Positives = 64/120 (53%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGK---ILKTYTGHTNSKYCISSTFSVTNGKY 259
V V+FS +GK++ G + + ++++ +TG+ +L+ T I S +GKY
Sbjct: 302 VCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKY 360
Query: 260 IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
+ +G+ED + +W++ +R + + GH + S+ IASG+ DRTV++W E
Sbjct: 361 LATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGS--GDRTVRLWDIE 418
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 85/263 (32%), Positives = 129/263 (49%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
+P + GH A++ V FS G LLAS S DK F
Sbjct: 49 KPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTV--------FR 100
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
H V + F SD + LV+ASDDKT+++W L +L H N+V C F+P +I
Sbjct: 101 AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLI 160
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+TV++WD + +C+ H VT VDF+ GT I +S D ++WD T H
Sbjct: 161 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRT-H 219
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ + V+ + F P+G ++L + D+TL++ + G++L T GH ++
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA- 278
Query: 251 TFSVTNGKYIVSGSEDSCVYLWE 273
FS T G+Y SG D V +W+
Sbjct: 279 -FSRT-GEYFASGGSDEQVMVWK 299
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 90/304 (29%), Positives = 150/304 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + GH AI+SV FS + + LAS S D +F GH+
Sbjct: 10 SLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAY--------RFAGHK 61
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
V+ + FS L S S DKT+R+W +P T+ HT V V+F +V+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVT 120
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D+TV++W K L L H + V F+ DG +IV++S D ++WD ++ C+
Sbjct: 121 ASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ + V++V F P+G I ++DNT+++W+ T ++L+ Y H+ + +S F
Sbjct: 181 HSYCE-HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALS--F 237
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G Y+++ S DS + + +L +++ L GH P +VA T ASG +D
Sbjct: 238 H-PSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG--SDEQ 294
Query: 313 VKIW 316
V +W
Sbjct: 295 VMVW 298
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 68/228 (29%), Positives = 108/228 (47%)
Query: 2 SSDQSLESFRPYTLTQT--LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D+++ + P ++ H + SV F DG+ L ++S DK
Sbjct: 80 SRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKF-- 137
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L + H V FS D R +VSASDDKT++LWD + C+ + H +V
Sbjct: 138 ------LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V+F+P I + + D TV++WDV+T + L+ HS V A+ F+ G ++T+S D
Sbjct: 192 YVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDS 251
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
+I D G + TL + P + V FS G++ G D + +W
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATT-VAFSRTGEYFASGGSDEQVMVW 298
Score = 184 (69.8 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 45/170 (26%), Positives = 79/170 (46%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L+ H+ + +FS DGRL+ S+S DK + + H V+
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSREC--------VHSYCEHGGFVT 191
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ F + +AS D T+++WDV T L+ H+ V ++F+P N +++ + D
Sbjct: 192 YVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDS 251
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
T++I D+ G+ L L H P T V F+R G + D +W ++
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
++ V FS N K + G++D+ L +W+ + GH ++ C++ FS +G + S
Sbjct: 22 ITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVN--FS-PSGHLLAS 78
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
GS D V +W + HT V SV H + + +D+TVK+W+ ++
Sbjct: 79 GSRDKTVRIWIPNVKGESTVFRAHTATVRSV--HFCSDGQSLVTASDDKTVKVWSTHRQ 135
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 361 (132.1 bits), Expect = 6.4e-33, P = 6.4e-33
Identities = 81/240 (33%), Positives = 131/240 (54%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
++D + SDD R+ D TA+ LK L GH+ V+ +F+P N ++S + D TVR+
Sbjct: 270 AADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 329
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN- 200
W ++T CL H+ PV F+ G V+ +D + R+W +T H I +
Sbjct: 330 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHL 387
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V+ +F PN ++ G+ D T+RLW+ G ++ +TGH + S TFS NG+++
Sbjct: 388 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFS-PNGRFL 444
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
+G+ D V LW++ +V +L+GHTD V S+ I+ASG++DN TV++W K
Sbjct: 445 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN--TVRLWDAVK 502
Score = 286 (105.7 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 65/210 (30%), Positives = 96/210 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + FS D L SSS D L + GH V D
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSED--------GTVRLWSLQTFTCLVGYKGHNYPVWD 350
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
FS + VS D+ RLW L+ GH V C F+P SN + +G+ D T
Sbjct: 351 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 410
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
VR+WDV G C+++ H P+ ++ F+ +G + T + DG +WD G M +
Sbjct: 411 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG-LMVGELKG 469
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
V ++FS +G+ + G++DNT+RLW+
Sbjct: 470 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 262 (97.3 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 71/237 (29%), Positives = 109/237 (45%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
++QG++ + + DS + D T+R+W V T L++ V ++I
Sbjct: 229 YQQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRS----------VKQAADLSLID 277
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
+ D RI D KT LK+L HS PV F+ D +++SS DG R+W T C
Sbjct: 278 KESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC 337
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
+ N PV +FSP G + + G D RLW + L+ + GH C +
Sbjct: 338 LVGY-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC--TR 394
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
F N Y+ +GS D V LW++ + V+ GH P+ S+ P +A+GA D
Sbjct: 395 FH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 450
Score = 226 (84.6 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 41/121 (33%), Positives = 67/121 (55%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ F GH V+ F +S ++ + S D+T+RLWDV C++ GH + + F+P
Sbjct: 380 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 439
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ +GA D V +WD+ G + L H+D V ++ F+RDG ++ + S D R+WD
Sbjct: 440 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Query: 186 A 186
A
Sbjct: 500 A 500
Score = 204 (76.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 65/216 (30%), Positives = 94/216 (43%)
Query: 95 KTIRLW-DVPTATCLKTLIG-HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV 152
K +RL D + C T + + + V+ S++I G D TVR+W V T K L+
Sbjct: 208 KRVRLGPDCLPSICFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRS 266
Query: 153 LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG 212
+ +D ++ +D D D L RI D T +K L P V FSP+
Sbjct: 267 VKQAAD-LSLIDKESD---------DVLERIMDEKTASELKILYGHSGP-VYGASFSPDR 315
Query: 213 KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLW 272
++L + D T+RLW+ T L Y GH Y + T G Y VSG D LW
Sbjct: 316 NYLLSSSEDGTVRLWSLQTFTCLVGYKGHN---YPVWDTQFSPYGYYFVSGGHDRVARLW 372
Query: 273 ELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ ++ GH V HP N +A+G+ D
Sbjct: 373 ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSAD 408
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 90/316 (28%), Positives = 149/316 (47%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQG 75
TQ L GH I+ V F ++AS S D + GH
Sbjct: 99 TQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLE--------RTLKGHTDA 150
Query: 76 VSDLVFSSDSRFLVSASDDKTIRLWDV-PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V+D+ + + LVS S D +I+LWD T CLK+L GH + V V F P + ++S +
Sbjct: 151 VNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSAS 210
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T++ WD+ TG C+ H+D V + + DGT+ ++S D +W +T
Sbjct: 211 RDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV 270
Query: 195 LIDDEN--------PPVSFVKFS---PNGK---FILVGTLDNTLRLWNYSTGKILKTYTG 240
L D E+ P ++ + P G + G+ D +++ WN +TG +L T
Sbjct: 271 LRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLA 330
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN 300
H N + F GKY++S ++D + +WEL +++ ++ +E H V +VA H T
Sbjct: 331 HEN--WVRGLAFH-PKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSP 387
Query: 301 IIASGALDNDRTVKIW 316
+ +G++D + K+W
Sbjct: 388 FVITGSVD--MSCKVW 401
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 77/274 (28%), Positives = 122/274 (44%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L +TL GH A++ + G+ L S S+D L+ GHE
Sbjct: 140 LERTLKGHTDAVNDIAIDAAGKQLVSCSSD-------LSIKLWDFGQTYDCLKSLKGHEH 192
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
VS + F F++SAS D TI+ WD+ T C+ T GH ++V + + + S +
Sbjct: 193 TVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASAS 252
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD--------------GTMIVTS-SYDG 179
D+TV +W T VL H V V++ D T I+ S S D
Sbjct: 253 LDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDR 312
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
+ W+ +TG + TL+ EN V + F P GK+++ D TLR+W S + +K
Sbjct: 313 SIKAWNINTGDVLFTLLAHENW-VRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIE 371
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
H + + + F T+ ++++GS D +WE
Sbjct: 372 AHEH--FVSTVAFHQTS-PFVITGSVDMSCKVWE 402
Score = 235 (87.8 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 59/199 (29%), Positives = 96/199 (48%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P + L GH + V F+P ++ S + D T+++WD +TG+ + L H+D
Sbjct: 92 W-IPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDA 150
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWD-ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218
V + + G +V+ S D ++WD T C+K+L E+ VS V F P G F+L
Sbjct: 151 VNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHT-VSSVTFLPTGDFVLSA 209
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D+T++ W+ STG + T+ GH + I + +G S S D V +W ++
Sbjct: 210 SRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS---NDGTLFASASLDQTVTVWSFATKS 266
Query: 279 VVQKLEGHTDPVISVASHP 297
L H V V P
Sbjct: 267 AKLVLRDHEHAVECVEWAP 285
Score = 223 (83.6 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 65/244 (26%), Positives = 110/244 (45%)
Query: 2 SSDQSLESF---RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXX 58
SSD S++ + + Y ++L GH +SSV F G + S+S D
Sbjct: 167 SSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYC- 225
Query: 59 XXXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV 118
+ F GH V + S+D SAS D+T+ +W T + L H + V
Sbjct: 226 -------VYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAV 278
Query: 119 FCVNF------------NPQSN---MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163
CV + P+ N ++ SG+ D +++ W++ TG L L AH + V +
Sbjct: 279 ECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGL 338
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
F+ G +++ + D R+W+ S CMK + E+ VS V F F++ G++D +
Sbjct: 339 AFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHF-VSTVAFHQTSPFVITGSVDMS 397
Query: 224 LRLW 227
++W
Sbjct: 398 CKVW 401
Score = 150 (57.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 23/74 (31%), Positives = 45/74 (60%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
HE V L F ++L+S +DDKT+R+W++ C+K + H ++V V F+ S ++
Sbjct: 331 HENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVI 390
Query: 132 SGAFDETVRIWDVK 145
+G+ D + ++W+ +
Sbjct: 391 TGSVDMSCKVWECR 404
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 94/312 (30%), Positives = 156/312 (50%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P L +T++ A+ +V+F+ DG L + +DK L+ ++G
Sbjct: 14 PQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTL--------LKTYSG 65
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H V D S D+ L S S DKT+ LWDV + + L GH V CV FN ++ +++
Sbjct: 66 HGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVML 125
Query: 132 SGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
SG+ D TVR WD ++ + +++L D ++++ + ++T S DG R +D G
Sbjct: 126 SGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEHE--LLTGSVDGRVRRYDLRMG 183
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+D P++ V FS +G+ L +LD+T+RL + STG++L Y+GH N Y +
Sbjct: 184 QLQ---VDYIGSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLD 240
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +++S SED VY W+L + KL V S++ HPTE + +
Sbjct: 241 CCLT-DKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTSM--- 296
Query: 310 DRTVKIWTQEKE 321
+ V++W E E
Sbjct: 297 EGRVQVWGAEPE 308
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 358 (131.1 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 86/296 (29%), Positives = 143/296 (48%)
Query: 28 SVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVFSSDSRF 87
++KFS D + L + S D F H+ + + FS D F
Sbjct: 230 TIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEF 289
Query: 88 LVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT 146
L + S D I++W + + CL+ HTN V C+ F+ S I+SG+FD +++I +K+
Sbjct: 290 LATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKS 349
Query: 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPV--- 203
GK LK+ H V FN D +++ S DG +IWDA + C++T+ V
Sbjct: 350 GKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDI 409
Query: 204 ---SFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
S N +F+LV + + + + + I KT+T NSK + T S Y+
Sbjct: 410 SIRSITILLKNPEFLLVCN-SSQISIVSMKSQTISKTFTSE-NSKTFLVCTLSPLQN-YL 466
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+ ED+ +Y ++ S ++ K + H VIS++ HPT+N++A+ +D +KIW
Sbjct: 467 YAVDEDNILYTFDFNSGSLLNKFKIHDQEVISISHHPTKNLLATTG--SDCLLKIW 520
Score = 177 (67.4 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 65/263 (24%), Positives = 113/263 (42%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT-GHEQGVSDLV 80
H AI + FS DG LA+ S D L+KF H GV+ L
Sbjct: 274 HDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKC--------LRKFEPAHTNGVTCLQ 325
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140
FS +S ++S S D ++++ + + LK GH ++V FN + ++S + D ++
Sbjct: 326 FSRNSTQILSGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIK 385
Query: 141 IWDVKTGKCLKVLPAHSDPVTAVDFN-RDGTMIVTS-SYDGLCR-----IWDASTGHCMK 193
IWD K+ CL+ + S VT D + R T+++ + + +C I + K
Sbjct: 386 IWDAKSSDCLQTITPTS-VVTVRDISIRSITILLKNPEFLLVCNSSQISIVSMKSQTISK 444
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
T + + SP ++ DN L +++++G +L + H IS +
Sbjct: 445 TFTSENSKTFLVCTLSPLQNYLYAVDEDNILYTFDFNSGSLLNKFKIHDQE--VISISHH 502
Query: 254 VTNGKYIVSGSEDSCVYLWELQS 276
T +GS D + +W+ S
Sbjct: 503 PTKNLLATTGS-DCLLKIWKSNS 524
>SGD|S000000379 [details] [associations]
symbol:SWD3 "Essential subunit of the COMPASS (Set1C)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA;IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000379 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936
GO:GO:0006348 GO:GO:0048188 GO:GO:0051568 GO:GO:0000781
GO:GO:0000723 KO:K14963 OrthoDB:EOG49CTJ0 EMBL:Z36043 EMBL:AY693212
PIR:S46046 RefSeq:NP_009734.1 ProteinModelPortal:P38123 SMR:P38123
DIP:DIP-1754N IntAct:P38123 MINT:MINT-393581 STRING:P38123
PaxDb:P38123 PeptideAtlas:P38123 EnsemblFungi:YBR175W GeneID:852472
KEGG:sce:YBR175W CYGD:YBR175w HOGENOM:HOG000091642 OMA:IRIWCAR
NextBio:971432 Genevestigator:P38123 GermOnline:YBR175W
Uniprot:P38123
Length = 315
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 79/231 (34%), Positives = 132/231 (57%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
T H + S+L +S D + + +ASDD ++ + + L T IGHT V + FN + N+
Sbjct: 52 TSHARPFSELCWSPDGQCIATASDDFSVEIIHLSYGL-LHTFIGHTAPVISLTFNRKGNL 110
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS-SYDGLCRIWDAST 188
+ + + DE+++IWD G +K + AHS+ V +VD + + I++S SYDGL RI+DA T
Sbjct: 111 LFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSILSSGSYDGLIRIFDAET 170
Query: 189 GHCMKTLIDD-----ENP--PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
GHC+KTL D EN P+S VKFS N +++LV +LD +++W+ G +++T+
Sbjct: 171 GHCLKTLTYDKDWKRENGVVPISQVKFSENARYLLVKSLDGVVKIWDCIGGCVVRTFQVQ 230
Query: 242 TNSK-----YCISSTFSVTNGK--YIVSGSEDSCVYLWELQSRKVVQKLEG 285
K C + +G ++SG E+ +Y W ++ ++Q L+G
Sbjct: 231 PLEKGVLHHSCGMDFLNPEDGSTPLVISGYENGDIYCWNSDTKSLLQLLDG 281
Score = 218 (81.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 56/191 (29%), Positives = 94/191 (49%)
Query: 14 TLTQTL-NGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
T++QTL H R S + +S DG+ +A++S D L F GH
Sbjct: 45 TVSQTLVTSHARPFSELCWSPDGQCIATASDD---------FSVEIIHLSYGLLHTFIGH 95
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ-SNMIV 131
V L F+ L ++S D++I++WD + +KT+ H+ V V+ S+++
Sbjct: 96 TAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSILS 155
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSD--------PVTAVDFNRDGTMIVTSSYDGLCRI 183
SG++D +RI+D +TG CLK L D P++ V F+ + ++ S DG+ +I
Sbjct: 156 SGSYDGLIRIFDAETGHCLKTLTYDKDWKRENGVVPISQVKFSENARYLLVKSLDGVVKI 215
Query: 184 WDASTGHCMKT 194
WD G ++T
Sbjct: 216 WDCIGGCVVRT 226
Score = 132 (51.5 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 41/161 (25%), Positives = 82/161 (50%)
Query: 161 TAVDFNRDGTMI-VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
T + DG + +T + L I+D + +TL+ P S + +SP+G+ I +
Sbjct: 17 TCAKISPDGQFLAITQGLNIL--IYDINRRTVSQTLVTSHARPFSELCWSPDGQCIATAS 74
Query: 220 LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV 279
D ++ + + S G +L T+ GHT IS TF+ G + + S D + +W+ + +
Sbjct: 75 DDFSVEIIHLSYG-LLHTFIGHTAP--VISLTFN-RKGNLLFTSSMDESIKIWDTLNGSL 130
Query: 280 VQKLEGHTDPVISVASHPTEN-IIASGALDNDRTVKIWTQE 319
++ + H++ V+SV ++ I++SG+ D ++I+ E
Sbjct: 131 MKTISAHSEAVVSVDVPMNDSSILSSGSYDG--LIRIFDAE 169
Score = 132 (51.5 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 58/214 (27%), Positives = 91/214 (42%)
Query: 2 SSDQSLESFR-PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
S D S+E Y L T GH + S+ F+ G LL +SS D+
Sbjct: 74 SDDFSVEIIHLSYGLLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSL--- 130
Query: 61 XXXXXLQKFTGHEQGVSDL-VFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNY-- 117
++ + H + V + V +DS L S S D IR++D T CLKTL ++
Sbjct: 131 -----MKTISAHSEAVVSVDVPMNDSSILSSGSYDGLIRIFDAETGHCLKTLTYDKDWKR 185
Query: 118 ------VFCVNFNPQSNMIVSGAFDETVRIWDVKTG---KCLKVLPAHSDPV---TAVDF 165
+ V F+ + ++ + D V+IWD G + +V P + +DF
Sbjct: 186 ENGVVPISQVKFSENARYLLVKSLDGVVKIWDCIGGCVVRTFQVQPLEKGVLHHSCGMDF 245
Query: 166 -N-RDG-TMIVTSSYD-GLCRIWDASTGHCMKTL 195
N DG T +V S Y+ G W++ T ++ L
Sbjct: 246 LNPEDGSTPLVISGYENGDIYCWNSDTKSLLQLL 279
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 86/274 (31%), Positives = 132/274 (48%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D+SL + P GH I+ V F+ G L+ASSS D+
Sbjct: 37 SCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGEST 96
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
F H V + FS D + LV+ASDDK++++W V L +L HTN+V
Sbjct: 97 V--------FKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVR 148
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
C F+P +I S D TVR+WD + +C+ + + T VDFN GT I +S D
Sbjct: 149 CARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADN 208
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239
+IWD T ++ N V+ F P+G +++ G+ D+T+++ + G+++ T
Sbjct: 209 TIKIWDIRTNKLIQHY-KVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLH 267
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
GH ++ TFS +G SG DS V +W+
Sbjct: 268 GHKGP--VLTVTFS-RDGDLFASGGADSQVLMWK 298
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 87/304 (28%), Positives = 147/304 (48%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + GH IS F+ + + LA+ S DK +F GH
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAF--------RFVGHT 60
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
++ + F+ + S+S D+T+RLW P+ T+ HT V V+F+ +V+
Sbjct: 61 DVITGVNFAPSGSLVASSSRDQTVRLW-TPSIKGESTVFKAHTASVRSVHFSRDGQRLVT 119
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D++V++W V+ K L L H++ V F+ DG +I + D R+WD S+ C+
Sbjct: 120 ASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCI 179
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ D +FV F+ +G I DNT+++W+ T K+++ Y H C S F
Sbjct: 180 N-IFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFS--F 236
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G Y++SGS DS + + +L +++ L GH PV++V ++ ASG D+
Sbjct: 237 H-PSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQ-- 293
Query: 313 VKIW 316
V +W
Sbjct: 294 VLMW 297
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 32/120 (26%), Positives = 56/120 (46%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
+S F+PN K + G+ D +L +WN + + GHT+ I+ +G + S
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTD---VITGVNFAPSGSLVAS 77
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVA-SHPTENIIASGALDNDRTVKIWTQEKE 321
S D V LW + + HT V SV S + ++ + +D++VK+W E++
Sbjct: 78 SSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTAS---DDKSVKVWGVERK 134
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 130
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 131 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 190
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 191 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 250
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 251 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 309
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 310 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 343
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 83 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 142
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 143 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 202
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 203 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 261
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 262 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 319
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 320 SLDFHKTAPYVVTGSVD--QTVKVW 342
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 40 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 99
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 100 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 159
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 160 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 218
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 219 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 278
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 279 VLFHSGGKFILSCA--DDKTLRVW 300
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 104 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 161
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 162 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 215
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 216 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 275
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 276 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 334
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 335 VDQTVKVW 342
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 29 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 87
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 88 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 145
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 146 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 202
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 203 CKAELREH-EHVVECISWAPESSYSS 227
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 146 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 205
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 206 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 265
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 266 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 325
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 326 TAPYVVTGSVDQTVKVWE 343
Score = 177 (67.4 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 266 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 325
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 326 TAPYVVTGSVDQTVKVWECR 345
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 268 (99.4 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 69/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WDV TG CL L H +
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 255 (94.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 248 (92.4 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 62/198 (31%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFT-GHEQGVSDLVFSSDSR---------FLVSASDDKTIRLWDVPTATC 107
++ + E S + ++ S FL+S S DKTI++WDV T C
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 363 (132.8 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 81/236 (34%), Positives = 130/236 (55%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
+SD + SDD R+ D TA+ LK L GH+ V+ +F+P N ++S + D TVR+
Sbjct: 508 ASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 567
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN- 200
W ++T CL H+ PV F+ G V+ +D + R+W +T H I +
Sbjct: 568 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHL 625
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V+ +F PN ++ G+ D T+RLW+ G ++ +TGH + S TFS NG+++
Sbjct: 626 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFS-PNGRFL 682
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+G+ D V LW++ +V +L+GHTD V S+ I+ASG++DN TV++W
Sbjct: 683 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN--TVRLW 736
Score = 327 (120.2 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 74/226 (32%), Positives = 112/226 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V FS D +L+S+S+D T+RLW + T TCL GH V+ F+P
Sbjct: 539 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 598
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VSG D R+W + L++ H V F+ + + T S D R+WD G+
Sbjct: 599 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN 658
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C++ + P+ + FSPNG+F+ G D + LW+ G ++ GHT++ C S
Sbjct: 659 CVR-IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT-VC-SL 715
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296
FS +G+ + SGS D+ V LW+ + K + LE TD + H
Sbjct: 716 RFS-RDGEILASGSMDNTVRLWD--AIKAFEDLE--TDDFTTATGH 756
Score = 286 (105.7 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 65/210 (30%), Positives = 96/210 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + FS D L SSS D L + GH V D
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSED--------GTVRLWSLQTFTCLVGYKGHNYPVWD 588
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
FS + VS D+ RLW L+ GH V C F+P SN + +G+ D T
Sbjct: 589 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 648
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
VR+WDV G C+++ H P+ ++ F+ +G + T + DG +WD G M +
Sbjct: 649 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG-LMVGELKG 707
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
V ++FS +G+ + G++DNT+RLW+
Sbjct: 708 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 259 (96.2 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 72/240 (30%), Positives = 108/240 (45%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F QG++ + + DS + D T+R+W V T L++ V +
Sbjct: 464 FLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRS----------VKQASDLS 512
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+I + D RI D KT LK+L HS PV F+ D +++SS DG R+W T
Sbjct: 513 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 572
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C+ N PV +FSP G + + G D RLW + L+ + GH C
Sbjct: 573 FTCLVGY-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC- 630
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ F N Y+ +GS D V LW++ + V+ GH P+ S+ P +A+GA D
Sbjct: 631 -TRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 688
Score = 237 (88.5 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ F GH V+ F +S ++ + S D+T+RLWDV C++ GH + + F+P
Sbjct: 618 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 677
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ +GA D V +WD+ G + L H+D V ++ F+RDG ++ + S D R+WD
Sbjct: 678 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Query: 186 ASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
A ++T DD + N + +L+GT
Sbjct: 738 AIKAFEDLET--DDFTTATGHINLPENSQELLLGT 770
Score = 211 (79.3 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 66/215 (30%), Positives = 93/215 (43%)
Query: 95 KTIRLW-DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153
K +RL D + C T + + V+ S++I G D TVR+W V T K L+ +
Sbjct: 447 KRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRSV 505
Query: 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK 213
SD ++ +D D D L RI D T +K L P V FSP+
Sbjct: 506 KQASD-LSLIDKESD---------DVLERIMDEKTASELKILYGHSGP-VYGASFSPDRN 554
Query: 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
++L + D T+RLW+ T L Y GH Y + T G Y VSG D LW
Sbjct: 555 YLLSSSEDGTVRLWSLQTFTCLVGYKGHN---YPVWDTQFSPYGYYFVSGGHDRVARLWA 611
Query: 274 LQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ ++ GH V HP N +A+G+ D
Sbjct: 612 TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSAD 646
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 363 (132.8 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 81/236 (34%), Positives = 130/236 (55%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
+SD + SDD R+ D TA+ LK L GH+ V+ +F+P N ++S + D TVR+
Sbjct: 510 ASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 569
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN- 200
W ++T CL H+ PV F+ G V+ +D + R+W +T H I +
Sbjct: 570 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHL 627
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V+ +F PN ++ G+ D T+RLW+ G ++ +TGH + S TFS NG+++
Sbjct: 628 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFS-PNGRFL 684
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+G+ D V LW++ +V +L+GHTD V S+ I+ASG++DN TV++W
Sbjct: 685 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN--TVRLW 738
Score = 327 (120.2 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 74/226 (32%), Positives = 112/226 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V FS D +L+S+S+D T+RLW + T TCL GH V+ F+P
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF 600
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VSG D R+W + L++ H V F+ + + T S D R+WD G+
Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN 660
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C++ + P+ + FSPNG+F+ G D + LW+ G ++ GHT++ C S
Sbjct: 661 CVR-IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT-VC-SL 717
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296
FS +G+ + SGS D+ V LW+ + K + LE TD + H
Sbjct: 718 RFS-RDGEILASGSMDNTVRLWD--AIKAFEDLE--TDDFTTATGH 758
Score = 286 (105.7 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 65/210 (30%), Positives = 96/210 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + FS D L SSS D L + GH V D
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSED--------GTVRLWSLQTFTCLVGYKGHNYPVWD 590
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
FS + VS D+ RLW L+ GH V C F+P SN + +G+ D T
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 650
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
VR+WDV G C+++ H P+ ++ F+ +G + T + DG +WD G M +
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG-LMVGELKG 709
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
V ++FS +G+ + G++DNT+RLW+
Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 259 (96.2 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 72/240 (30%), Positives = 108/240 (45%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F QG++ + + DS + D T+R+W V T L++ V +
Sbjct: 466 FLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRS----------VKQASDLS 514
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+I + D RI D KT LK+L HS PV F+ D +++SS DG R+W T
Sbjct: 515 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 574
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C+ N PV +FSP G + + G D RLW + L+ + GH C
Sbjct: 575 FTCLVGY-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC- 632
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ F N Y+ +GS D V LW++ + V+ GH P+ S+ P +A+GA D
Sbjct: 633 -TRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 690
Score = 237 (88.5 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ F GH V+ F +S ++ + S D+T+RLWDV C++ GH + + F+P
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ +GA D V +WD+ G + L H+D V ++ F+RDG ++ + S D R+WD
Sbjct: 680 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Query: 186 ASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
A ++T DD + N + +L+GT
Sbjct: 740 AIKAFEDLET--DDFTTATGHINLPENSQELLLGT 772
Score = 211 (79.3 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 66/215 (30%), Positives = 93/215 (43%)
Query: 95 KTIRLW-DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153
K +RL D + C T + + V+ S++I G D TVR+W V T K L+ +
Sbjct: 449 KRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRSV 507
Query: 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK 213
SD ++ +D D D L RI D T +K L P V FSP+
Sbjct: 508 KQASD-LSLIDKESD---------DVLERIMDEKTASELKILYGHSGP-VYGASFSPDRN 556
Query: 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
++L + D T+RLW+ T L Y GH Y + T G Y VSG D LW
Sbjct: 557 YLLSSSEDGTVRLWSLQTFTCLVGYKGHN---YPVWDTQFSPYGYYFVSGGHDRVARLWA 613
Query: 274 LQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ ++ GH V HP N +A+G+ D
Sbjct: 614 TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSAD 648
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 83/263 (31%), Positives = 127/263 (48%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
+P T GH A++ V FS G LLAS S DK F
Sbjct: 49 KPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--------FR 100
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
H V + F SD + V+ASDDKT+++W L +L H N+V C F+P +I
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+TV++WD + +C+ H VT VDF+ GT I + D ++WD T H
Sbjct: 161 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-H 219
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ + V+ + F P+G +++ + D+TL++ + G++L T GH ++
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA- 278
Query: 251 TFSVTNGKYIVSGSEDSCVYLWE 273
FS T G+Y SG D V +W+
Sbjct: 279 -FSRT-GEYFASGGSDEQVMVWK 299
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 91/304 (29%), Positives = 148/304 (48%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + GH A++SV FS + + LAS S D +F GH+
Sbjct: 10 SLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAY--------RFAGHK 61
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
V+ + FS L S S DKT+R+W VP T+ HT V V+F V+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 120
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D+TV++W K L L H + V F+ DG +IV++S D ++WD ++ C+
Sbjct: 121 ASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV 180
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ + V++V F P+G I +DNT+++W+ T ++L+ Y H+ + +S F
Sbjct: 181 HSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALS--F 237
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G Y+V+ S DS + + +L +++ L GH P +VA T ASG +D
Sbjct: 238 H-PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG--SDEQ 294
Query: 313 VKIW 316
V +W
Sbjct: 295 VMVW 298
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 68/228 (29%), Positives = 106/228 (46%)
Query: 2 SSDQSLESFRPYTLTQT--LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D+++ + P ++ H + SV F DG+ ++S DK
Sbjct: 80 SRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKF-- 137
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L + H V FS D R +VSASDDKT++LWD + C+ + H +V
Sbjct: 138 ------LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V+F+P I + D TV++WDV+T + L+ HS V A+ F+ G +VT+S D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 251
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
+I D G + TL + P + V FS G++ G D + +W
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATT-VAFSRTGEYFASGGSDEQVMVW 298
Score = 186 (70.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 46/170 (27%), Positives = 78/170 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L+ H+ + KFS DGRL+ S+S DK + + H V+
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC--------VHSYCEHGGFVT 191
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ F + +A D T+++WDV T L+ H+ V ++F+P N +V+ + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 251
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
T++I D+ G+ L L H P T V F+R G + D +W ++
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
V+ V FS N K + G++D+ L +W+ + GH ++ C++ FS +G + S
Sbjct: 22 VTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVN--FS-PSGHLLAS 78
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
GS D V +W + HT V SV H + + +D+TVK+W+ ++
Sbjct: 79 GSRDKTVRIWVPNVKGESTVFRAHTATVRSV--HFCSDGQSFVTASDDKTVKVWSTHRQ 135
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 224 (83.9 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 53/150 (35%), Positives = 85/150 (56%)
Query: 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
++TSS DG R +D G TL+ E+ P+S V + + K + D T++L +
Sbjct: 183 VITSSVDGCIRTYDVRMG----TLVTYEDTIPISSVSITKDKKCFIASCTDETVKLIDID 238
Query: 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV 290
+ + LK Y GH N Y I+S S + I+SGSED+ Y++EL S K++ KL GH++ +
Sbjct: 239 SYETLKEYKGHKNKVYKINSC-SNFDDSLIISGSEDNDFYIYELLSGKLLSKLSGHSNII 297
Query: 291 ISVASHPTENIIASGALDNDRTVKIWTQEK 320
V SHP++N + + D T++IW Q +
Sbjct: 298 THVDSHPSKNQFITSS--TDCTIRIWDQSE 325
Score = 170 (64.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 37/114 (32%), Positives = 63/114 (55%)
Query: 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF--NPQSNMIVSG 133
+S + + D + +++ D+T++L D+ + LK GH N V+ +N N ++I+SG
Sbjct: 211 ISSVSITKDKKCFIASCTDETVKLIDIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISG 270
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+ D I+++ +GK L L HS+ +T VD + +TSS D RIWD S
Sbjct: 271 SEDNDFYIYELLSGKLLSKLSGHSNIITHVDSHPSKNQFITSSTDCTIRIWDQS 324
Score = 153 (58.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/127 (28%), Positives = 70/127 (55%)
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C K L + + V+ VK++ +G + L G+ D +++L+N S G ++ ++ H Y I
Sbjct: 6 CNKVL-SNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHG---YGIGD 61
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG-HTDPVISVASHPTENIIASGALDN 309
S ++ K + S +E +Y W++ S +V+++ + H D + SV + ++ SG+ +
Sbjct: 62 LVSTSDNKQLFSCAEKQ-LYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGS--S 118
Query: 310 DRTVKIW 316
DR VK W
Sbjct: 119 DRLVKAW 125
Score = 144 (55.7 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 38/153 (24%), Positives = 72/153 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L+ H +++ VK++ DG S S+DK + F H G+
Sbjct: 8 KVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSM--------IHSFEEHGYGI 59
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG-HTNYVFCVNFNPQSNMIVSGAF 135
DLV +SD++ L S ++ K + WD+ + ++ H + + V N S ++ SG+
Sbjct: 60 GDLVSTSDNKQLFSCAE-KQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSS 118
Query: 136 DETVRIWDVKTGKC--LKVLPAHSDPVTAVDFN 166
D V+ WD++T +++L D +T++ N
Sbjct: 119 DRLVKAWDLRTKSINPVQILDDAKDTITSIIVN 151
Score = 140 (54.3 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 33/139 (23%), Positives = 69/139 (49%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+ H V+ + ++SD + +S S DK+I+L++V + + + H Y + N
Sbjct: 11 SNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEH-GYGIGDLVSTSDNK 69
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLP-AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+ ++ + WD+ +G+ ++ AH+D +T+V N D T++ + S D L + WD T
Sbjct: 70 QLFSCAEKQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDRLVKAWDLRT 129
Query: 189 GHCMKT-LIDDENPPVSFV 206
++DD ++ +
Sbjct: 130 KSINPVQILDDAKDTITSI 148
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/147 (25%), Positives = 69/147 (46%)
Query: 149 CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKF 208
C KVL HS VT V +N DG ++ S D ++++ S G + + + V
Sbjct: 6 CNKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVST 65
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSC 268
S N + L + L W+ ++G++++ + N I+S + + SGS D
Sbjct: 66 SDNKQ--LFSCAEKQLYQWDIASGQVIRRFQNAHNDT--ITSVCVNLDSTLLFSGSSDRL 121
Query: 269 VYLWELQSRKV--VQKLEGHTDPVISV 293
V W+L+++ + VQ L+ D + S+
Sbjct: 122 VKAWDLRTKSINPVQILDDAKDTITSI 148
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/129 (19%), Positives = 58/129 (44%)
Query: 106 TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165
+C K L H+ V V +N +SG+ D+++++++V G + H + +
Sbjct: 5 SCNKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVS 64
Query: 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
D + + + L + WD ++G ++ + N ++ V + + + G+ D ++
Sbjct: 65 TSDNKQLFSCAEKQLYQ-WDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDRLVK 123
Query: 226 LWNYSTGKI 234
W+ T I
Sbjct: 124 AWDLRTKSI 132
Score = 44 (20.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 16/76 (21%), Positives = 35/76 (46%)
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH++ + + T K +++ S D C+ ++++ +V + T P+ SV+ +
Sbjct: 164 GHSHGNNNNNQPHTHTQ-KEVITSSVDGCIRTYDVRMGTLVTYED--TIPISSVSITKDK 220
Query: 300 NIIASGALDNDRTVKI 315
+ D TVK+
Sbjct: 221 KCFIASC--TDETVKL 234
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 361 (132.1 bits), Expect = 3.8e-32, P = 3.8e-32
Identities = 81/240 (33%), Positives = 131/240 (54%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
++D + SDD R+ D TA+ LK L GH+ V+ +F+P N ++S + D TVR+
Sbjct: 510 AADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 569
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN- 200
W ++T CL H+ PV F+ G V+ +D + R+W +T H I +
Sbjct: 570 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHL 627
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V+ +F PN ++ G+ D T+RLW+ G ++ +TGH + S TFS NG+++
Sbjct: 628 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFS-PNGRFL 684
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
+G+ D V LW++ +V +L+GHTD V S+ I+ASG++DN TV++W K
Sbjct: 685 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN--TVRLWDAVK 742
Score = 286 (105.7 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 65/210 (30%), Positives = 96/210 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + FS D L SSS D L + GH V D
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSED--------GTVRLWSLQTFTCLVGYKGHNYPVWD 590
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
FS + VS D+ RLW L+ GH V C F+P SN + +G+ D T
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 650
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
VR+WDV G C+++ H P+ ++ F+ +G + T + DG +WD G M +
Sbjct: 651 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG-LMVGELKG 709
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
V ++FS +G+ + G++DNT+RLW+
Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 259 (96.2 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 72/240 (30%), Positives = 108/240 (45%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F QG++ + + DS + D T+R+W V T L++ V +
Sbjct: 466 FLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRS----------VKQAADLS 514
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+I + D RI D KT LK+L HS PV F+ D +++SS DG R+W T
Sbjct: 515 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 574
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C+ N PV +FSP G + + G D RLW + L+ + GH C
Sbjct: 575 FTCLVGY-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC- 632
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ F N Y+ +GS D V LW++ + V+ GH P+ S+ P +A+GA D
Sbjct: 633 -TRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 690
Score = 236 (88.1 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ F GH V+ F +S ++ + S D+T+RLWDV C++ GH + + F+P
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ +GA D V +WD+ G + L H+D V ++ F+RDG ++ + S D R+WD
Sbjct: 680 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Query: 186 ASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
A ++T DD + N + +L+GT
Sbjct: 740 AVKAFEDVET--DDFTTATGHINLPENSQELLLGT 772
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 65/215 (30%), Positives = 93/215 (43%)
Query: 95 KTIRLW-DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153
K +RL D + C T + + V+ S++I G D TVR+W V T K L+ +
Sbjct: 449 KRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRSV 507
Query: 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK 213
+D ++ +D D D L RI D T +K L P V FSP+
Sbjct: 508 KQAAD-LSLIDKESD---------DVLERIMDEKTASELKILYGHSGP-VYGASFSPDRN 556
Query: 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
++L + D T+RLW+ T L Y GH Y + T G Y VSG D LW
Sbjct: 557 YLLSSSEDGTVRLWSLQTFTCLVGYKGHN---YPVWDTQFSPYGYYFVSGGHDRVARLWA 613
Query: 274 LQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ ++ GH V HP N +A+G+ D
Sbjct: 614 TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSAD 648
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 361 (132.1 bits), Expect = 3.8e-32, P = 3.8e-32
Identities = 81/240 (33%), Positives = 131/240 (54%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
++D + SDD R+ D TA+ LK L GH+ V+ +F+P N ++S + D TVR+
Sbjct: 511 AADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 570
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN- 200
W ++T CL H+ PV F+ G V+ +D + R+W +T H I +
Sbjct: 571 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHL 628
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V+ +F PN ++ G+ D T+RLW+ G ++ +TGH + S TFS NG+++
Sbjct: 629 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFS-PNGRFL 685
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
+G+ D V LW++ +V +L+GHTD V S+ I+ASG++DN TV++W K
Sbjct: 686 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN--TVRLWDAVK 743
Score = 286 (105.7 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 65/210 (30%), Positives = 96/210 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + FS D L SSS D L + GH V D
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSED--------GTVRLWSLQTFTCLVGYKGHNYPVWD 591
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
FS + VS D+ RLW L+ GH V C F+P SN + +G+ D T
Sbjct: 592 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 651
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
VR+WDV G C+++ H P+ ++ F+ +G + T + DG +WD G M +
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG-LMVGELKG 710
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
V ++FS +G+ + G++DNT+RLW+
Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 259 (96.2 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 72/240 (30%), Positives = 108/240 (45%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F QG++ + + DS + D T+R+W V T L++ V +
Sbjct: 467 FLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRS----------VKQAADLS 515
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+I + D RI D KT LK+L HS PV F+ D +++SS DG R+W T
Sbjct: 516 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 575
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C+ N PV +FSP G + + G D RLW + L+ + GH C
Sbjct: 576 FTCLVGY-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC- 633
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ F N Y+ +GS D V LW++ + V+ GH P+ S+ P +A+GA D
Sbjct: 634 -TRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 691
Score = 237 (88.5 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ F GH V+ F +S ++ + S D+T+RLWDV C++ GH + + F+P
Sbjct: 621 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ +GA D V +WD+ G + L H+D V ++ F+RDG ++ + S D R+WD
Sbjct: 681 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Query: 186 ASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
A ++T DD + N + +L+GT
Sbjct: 741 AVKAFEDLET--DDFTTATGHINLPENSQELLLGT 773
Score = 208 (78.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 65/215 (30%), Positives = 93/215 (43%)
Query: 95 KTIRLW-DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153
K +RL D + C T + + V+ S++I G D TVR+W V T K L+ +
Sbjct: 450 KRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRSV 508
Query: 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK 213
+D ++ +D D D L RI D T +K L P V FSP+
Sbjct: 509 KQAAD-LSLIDKESD---------DVLERIMDEKTASELKILYGHSGP-VYGASFSPDRN 557
Query: 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
++L + D T+RLW+ T L Y GH Y + T G Y VSG D LW
Sbjct: 558 YLLSSSEDGTVRLWSLQTFTCLVGYKGHN---YPVWDTQFSPYGYYFVSGGHDRVARLWA 614
Query: 274 LQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ ++ GH V HP N +A+G+ D
Sbjct: 615 TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSAD 649
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 361 (132.1 bits), Expect = 3.8e-32, P = 3.8e-32
Identities = 81/240 (33%), Positives = 131/240 (54%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
+SD + SDD R+ D TA+ LK L GH+ V+ +F+P N ++S + D TVR+
Sbjct: 511 ASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 570
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN- 200
W ++T CL H+ PV F+ G V+ +D + R+W +T H I +
Sbjct: 571 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHL 628
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V+ ++ PN ++ G+ D T+RLW+ G ++ +TGH + S TFS NG+++
Sbjct: 629 ADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH--SLTFS-PNGRFL 685
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
+G+ D V LW++ +V +L+GHTD V S+ I+ASG++DN TV++W K
Sbjct: 686 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN--TVRLWDAVK 743
Score = 283 (104.7 bits), Expect = 9.5e-24, P = 9.5e-24
Identities = 64/210 (30%), Positives = 96/210 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + FS D L SSS D L + GH V D
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSED--------GTVRLWSLQTFTCLVGYKGHNYPVWD 591
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
FS + VS D+ RLW L+ GH V C ++P SN + +G+ D T
Sbjct: 592 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRT 651
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
VR+WDV G C+++ H P+ ++ F+ +G + T + DG +WD G M +
Sbjct: 652 VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG-LMVGELKG 710
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
V ++FS +G+ + G++DNT+RLW+
Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 258 (95.9 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 72/240 (30%), Positives = 107/240 (44%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F QG++ + + DS + D T+R+W V T L++ V +
Sbjct: 467 FLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRS----------VKQASDLS 515
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+I + D RI D KT LK+L HS PV F+ D +++SS DG R+W T
Sbjct: 516 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 575
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C+ N PV +FSP G + + G D RLW + L+ + GH C
Sbjct: 576 FTCLVGY-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC- 633
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
T N Y+ +GS D V LW++ + V+ GH P+ S+ P +A+GA D
Sbjct: 634 --TRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 691
Score = 234 (87.4 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 47/155 (30%), Positives = 80/155 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ F GH V+ + +S ++ + S D+T+RLWDV C++ GH + + F+P
Sbjct: 621 LRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ +GA D V +WD+ G + L H+D V ++ F+RDG ++ + S D R+WD
Sbjct: 681 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Query: 186 ASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
A ++T DD + N + +L+GT
Sbjct: 741 AVKAFEDLET--DDFTTATGHINLPENSQELLLGT 773
Score = 211 (79.3 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 66/215 (30%), Positives = 93/215 (43%)
Query: 95 KTIRLW-DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153
K +RL D + C T + + V+ S++I G D TVR+W V T K L+ +
Sbjct: 450 KRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRSV 508
Query: 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK 213
SD ++ +D D D L RI D T +K L P V FSP+
Sbjct: 509 KQASD-LSLIDKESD---------DVLERIMDEKTASELKILYGHSGP-VYGASFSPDRN 557
Query: 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
++L + D T+RLW+ T L Y GH Y + T G Y VSG D LW
Sbjct: 558 YLLSSSEDGTVRLWSLQTFTCLVGYKGHN---YPVWDTQFSPYGYYFVSGGHDRVARLWA 614
Query: 274 LQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ ++ GH V HP N +A+G+ D
Sbjct: 615 TDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSAD 649
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 359 (131.4 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 76/256 (29%), Positives = 131/256 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + +D + +W V C+ +L GHT+ V C+ FN
Sbjct: 13 LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFN 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+V+G+ ++R+WD++ K L+ L H ++++DF+ G + + S D ++W
Sbjct: 73 SSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ V + FSP+GK++ + D+T++LW+ GK++ +T HT++
Sbjct: 133 DVRRKGCVFRY-KGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA 191
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
+ F N + SGS D V LW+L+ ++ EG T V SV +P + + S
Sbjct: 192 VNVVQ--FH-PNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYS 248
Query: 305 GALDNDRTVKIWTQEK 320
G+ +N V W ++
Sbjct: 249 GS-ENTLRVYGWEPDR 263
Score = 244 (91.0 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 57/212 (26%), Positives = 99/212 (46%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH A+ ++F+ SS ++ L+ GH+ +S
Sbjct: 58 SLTGHTSAVGCIQFN--------SSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASIS 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F +L S S D I+LWDV C+ GHT V C+ F+P + S + D
Sbjct: 110 SLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDS 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + +H+ V V F+ + ++ + S D ++WD + + + +
Sbjct: 170 TVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSS-E 228
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
E V V F+P+G + G+ +NTLR++ +
Sbjct: 229 GETGVVRSVLFNPDGSCLYSGS-ENTLRVYGW 259
Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 55/177 (31%), Positives = 85/177 (48%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH +ISS+ F G LAS S D ++ GH Q
Sbjct: 97 ILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVF--------RYKGHTQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SASDD T++LWD+ + HT+ V V F+P ++ SG+
Sbjct: 149 AVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGS 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D TV++WD++ + + V +V FN DG+ + + S + L R++ C
Sbjct: 209 ADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTL-RVYGWEPDRC 264
Score = 154 (59.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 47/187 (25%), Positives = 87/187 (46%)
Query: 21 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV 80
GH +A+ + FS DG+ LAS+S D + +FT H V+ +
Sbjct: 145 GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKM--------ITEFTSHTSAVNVVQ 196
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140
F + L S S D+T++LWD+ + + G T V V FNP + + SG+ + T+R
Sbjct: 197 FHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLR 255
Query: 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC-RIWDAS----TGHCMKTL 195
++ + +C V+ V+ + + + + V+ S+ + + D + +G ++ L
Sbjct: 256 VYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKKSGSVIQGL 315
Query: 196 IDDENPP 202
I D+ P
Sbjct: 316 IQDKPIP 322
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 89/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSA+ DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W+Y + +K
Sbjct: 316 RDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 79/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS A D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + I T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 73/264 (27%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV+++ D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 254 (94.5 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 61/206 (29%), Positives = 102/206 (49%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 ARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHPTENIIAS 304
+L H + V+ S E+ +S
Sbjct: 268 CKAELREH-EHVVECISWAPESSYSS 292
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 34/129 (26%), Positives = 64/129 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S++ DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN 128
C+++ P+S+
Sbjct: 281 CISWAPESS 289
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 82/263 (31%), Positives = 127/263 (48%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
+P + GH A++ V FS G LLAS S DK F
Sbjct: 80 KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTV--------FR 131
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
H V + F SD + V+ASDDKTI++W L +L H N+V C F+P +I
Sbjct: 132 AHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 191
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+TV++WD + +C+ H VT VDF+ GT + + D ++WD T H
Sbjct: 192 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRT-H 250
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ + V+ + F P+G +++ + D+TL++ + G++L T GH ++
Sbjct: 251 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA- 309
Query: 251 TFSVTNGKYIVSGSEDSCVYLWE 273
FS T G+Y SG D V +W+
Sbjct: 310 -FSRT-GEYFASGGSDEQVMVWK 330
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 89/304 (29%), Positives = 148/304 (48%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + GH A++ V FS + + LAS S D +FTGH+
Sbjct: 41 SLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAY--------RFTGHK 92
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
V+ + FS L S S DKT+R+W VP T+ HT V V+F V+
Sbjct: 93 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVT 151
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D+T+++W K L L H + V F+ DG +IV++S D ++WD ++ C+
Sbjct: 152 ASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECV 211
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ + V++V F P+G + +DNT+++W+ T ++L+ Y H+ + +S F
Sbjct: 212 HSYCE-HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALS--F 268
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G Y+V+ S DS + + +L +++ L GH P +VA T ASG +D
Sbjct: 269 H-PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG--SDEQ 325
Query: 313 VKIW 316
V +W
Sbjct: 326 VMVW 329
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 67/220 (30%), Positives = 104/220 (47%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVF 81
H + SV F DG+ ++S DK L + H V F
Sbjct: 133 HTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKF--------LFSLSQHINWVRCAKF 184
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
S D R +VSASDDKT++LWD + C+ + H +V V+F+P + + D TV++
Sbjct: 185 SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKV 244
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENP 201
WDV+T + L+ HS V A+ F+ G +VT+S D +I D G + TL + P
Sbjct: 245 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP 304
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLW--NYST---GKILK 236
+ V FS G++ G D + +W N+ G++L+
Sbjct: 305 ATT-VAFSRTGEYFASGGSDEQVMVWKSNFDVIDYGEVLR 343
Score = 124 (48.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
V+ V FS N K + G++D+ L +W+ +TGH ++ C++ FS +G + S
Sbjct: 53 VTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN--FS-PSGHLLAS 109
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
GS D V +W + HT V SV H + + +D+T+K+W+ ++
Sbjct: 110 GSRDKTVRIWVPNIKGESTVFRAHTATVRSV--HFCSDGQSFVTASDDKTIKVWSTHRQ 166
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 82/263 (31%), Positives = 127/263 (48%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
+P + GH A++ V FS G LLAS S DK F
Sbjct: 11 KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--------FR 62
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
H V + F SD + V+ASDDKT+++W L +L H N+V C F+P +I
Sbjct: 63 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 122
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+TV++WD + +C+ H VT VDF+ GT I + D ++WD T H
Sbjct: 123 VSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-H 181
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ + V+ + F P+G +++ + D+TL++ + G++L T GH ++
Sbjct: 182 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA- 240
Query: 251 TFSVTNGKYIVSGSEDSCVYLWE 273
FS T G+Y SG D V +W+
Sbjct: 241 -FSRT-GEYFASGGSDEQVMVWK 261
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 79/250 (31%), Positives = 130/250 (52%)
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQ 126
+FTGH+ V+ + FS L S S DKT+R+W VP T+ HT V V+F
Sbjct: 18 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSD 76
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
V+ + D+TV++W K L L H + V F+ DG +IV++S D ++WD
Sbjct: 77 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 136
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
S+ C+ + + V++V F P+G I +DNT+++W+ T ++L+ Y H+ +
Sbjct: 137 SSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 195
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
+S F +G Y+++ S DS + + +L +++ L GH P +VA T ASG
Sbjct: 196 GLS--FH-PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 252
Query: 307 LDNDRTVKIW 316
+D V +W
Sbjct: 253 --SDEQVMVW 260
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 66/228 (28%), Positives = 105/228 (46%)
Query: 2 SSDQSLESFRPYTLTQT--LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D+++ + P ++ H + SV F DG+ ++S DK
Sbjct: 42 SRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF-- 99
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L + H V FS D R +VSASDDKT++LWD + C+ + H +V
Sbjct: 100 ------LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVT 153
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V+F+P I + D TV++WDV+T + L+ HS V + F+ G ++T+S D
Sbjct: 154 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS 213
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
+I D G + TL + P + V FS G++ G D + +W
Sbjct: 214 TLKILDLMEGRLLYTLHGHQGPATT-VAFSRTGEYFASGGSDEQVMVW 260
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 66/224 (29%), Positives = 119/224 (53%)
Query: 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIW--DVKTGKCLK 151
D + +W + + GH + V CVNF+P +++ SG+ D+TVRIW +VK G+
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK-GEST- 59
Query: 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN 211
V AH+ V +V F DG VT+S D ++W + +L N V KFSP+
Sbjct: 60 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINW-VRCAKFSPD 118
Query: 212 GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
G+ I+ + D T++LW+ S+ + + +Y H + F +G I + D+ V +
Sbjct: 119 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGG--FVTYVDFH-PSGTCIAAAGMDNTVKV 175
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKI 315
W++++ +++Q + H+ V ++ HP+ N + + + +D T+KI
Sbjct: 176 WDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITAS--SDSTLKI 217
Score = 182 (69.1 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L+ H+ + KFS DGRL+ S+S DK + + H V+
Sbjct: 102 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC--------VHSYCEHGGFVT 153
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ F + +A D T+++WDV T L+ H+ V ++F+P N +++ + D
Sbjct: 154 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS 213
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
T++I D+ G+ L L H P T V F+R G + D +W ++
Sbjct: 214 TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 263
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 82/263 (31%), Positives = 127/263 (48%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
+P + GH A++ V FS G LLAS S DK F
Sbjct: 49 KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--------FR 100
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
H V + F SD + V+ASDDKT+++W L +L H N+V C F+P +I
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+TV++WD + +C+ H VT VDF+ GT I + D ++WD T H
Sbjct: 161 VSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT-H 219
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ + V+ + F P+G +++ + D+TL++ + G++L T GH ++
Sbjct: 220 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA- 278
Query: 251 TFSVTNGKYIVSGSEDSCVYLWE 273
FS T G+Y SG D V +W+
Sbjct: 279 -FSRT-GEYFASGGSDEQVMVWK 299
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 91/304 (29%), Positives = 148/304 (48%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + GH A++ V FS + + LAS S D +FTGH+
Sbjct: 10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAY--------RFTGHK 61
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
V+ + FS L S S DKT+R+W VP T+ HT V V+F V+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 120
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D+TV++W K L L H + V F+ DG +IV++S D ++WD S+ C+
Sbjct: 121 ASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECV 180
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ + V++V F P+G I +DNT+++W+ T ++L+ Y H+ + +S F
Sbjct: 181 HSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLS--F 237
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G Y+++ S DS + + +L +++ L GH P +VA T ASG +D
Sbjct: 238 H-PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG--SDEQ 294
Query: 313 VKIW 316
V +W
Sbjct: 295 VMVW 298
Score = 273 (101.2 bits), Expect = 9.4e-24, P = 9.4e-24
Identities = 66/228 (28%), Positives = 105/228 (46%)
Query: 2 SSDQSLESFRPYTLTQT--LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D+++ + P ++ H + SV F DG+ ++S DK
Sbjct: 80 SRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF-- 137
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L + H V FS D R +VSASDDKT++LWD + C+ + H +V
Sbjct: 138 ------LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVT 191
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V+F+P I + D TV++WDV+T + L+ HS V + F+ G ++T+S D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS 251
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
+I D G + TL + P + V FS G++ G D + +W
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATT-VAFSRTGEYFASGGSDEQVMVW 298
Score = 182 (69.1 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L+ H+ + KFS DGRL+ S+S DK + + H V+
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC--------VHSYCEHGGFVT 191
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ F + +A D T+++WDV T L+ H+ V ++F+P N +++ + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDS 251
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
T++I D+ G+ L L H P T V F+R G + D +W ++
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
V+ V FS N K + G++D+ L +W+ +TGH ++ C++ FS +G + S
Sbjct: 22 VTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN--FS-PSGHLLAS 78
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
GS D V +W + HT V SV H + + +D+TVK+W ++
Sbjct: 79 GSRDKTVRIWVPNVKGESTVFRAHTATVRSV--HFCSDGQSFVTASDDKTVKVWATHRQ 135
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 355 (130.0 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 79/256 (30%), Positives = 129/256 (50%)
Query: 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + LW + C+ +L GHT+ V V N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+IV+G+ ++R+WD++ K L+ L H + ++DF+ G + + S D ++W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ + V ++FSP+GK++ D+T++LW+ + GK++ + GHT
Sbjct: 133 DIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
+ F N + SGS D + W+L+ +VV +EG PV SV +P + S
Sbjct: 192 VNVVE--FH-PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYS 248
Query: 305 GALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 249 GCQDSLR-VYGWEPER 263
Score = 255 (94.8 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 59/212 (27%), Positives = 97/212 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH + SV+ + L+ + S L+ GH+ +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQS--------GSIRVWDLEAAKILRTLMGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWD+ C+ GH+ V C+ F+P + S A D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + P H+ PV V+F+ + ++ + S D R WD + + I+
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIE 228
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
E PV V F+P+G + G D+ LR++ +
Sbjct: 229 GEPGPVRSVLFNPDGCCLYSGCQDS-LRVYGW 259
Score = 227 (85.0 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + ++ GH Q
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQD--------TNIKLWDIRRKGCVFRYRGHSQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GHT V V F+P ++ SG+
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T+R WD++ + + + PV +V FN DG + + D L R++ C
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERCFDV 267
Query: 195 LI 196
++
Sbjct: 268 VL 269
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 355 (130.0 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 79/256 (30%), Positives = 129/256 (50%)
Query: 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + LW + C+ +L GHT+ V V N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+IV+G+ ++R+WD++ K L+ L H + ++DF+ G + + S D ++W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ + V ++FSP+GK++ D+T++LW+ + GK++ + GHT
Sbjct: 133 DIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
+ F N + SGS D + W+L+ +VV +EG PV SV +P + S
Sbjct: 192 VNVVE--FH-PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYS 248
Query: 305 GALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 249 GCQDSLR-VYGWEPER 263
Score = 255 (94.8 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 59/212 (27%), Positives = 97/212 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH + SV+ + L+ + S L+ GH+ +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQS--------GSIRVWDLEAAKILRTLMGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWD+ C+ GH+ V C+ F+P + S A D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + P H+ PV V+F+ + ++ + S D R WD + + I+
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIE 228
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
E PV V F+P+G + G D+ LR++ +
Sbjct: 229 GEPGPVRSVLFNPDGCCLYSGCQDS-LRVYGW 259
Score = 227 (85.0 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + ++ GH Q
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQD--------TNIKLWDIRRKGCVFRYRGHSQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GHT V V F+P ++ SG+
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T+R WD++ + + + PV +V FN DG + + D L R++ C
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERCFDV 267
Query: 195 LI 196
++
Sbjct: 268 VL 269
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 355 (130.0 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 79/256 (30%), Positives = 129/256 (50%)
Query: 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + LW + C+ +L GHT+ V V N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+IV+G+ ++R+WD++ K L+ L H + ++DF+ G + + S D ++W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ + V ++FSP+GK++ D+T++LW+ + GK++ + GHT
Sbjct: 133 DIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
+ F N + SGS D + W+L+ +VV +EG PV SV +P + S
Sbjct: 192 VNVVE--FH-PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYS 248
Query: 305 GALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 249 GCQDSLR-VYGWEPER 263
Score = 255 (94.8 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 59/212 (27%), Positives = 97/212 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH + SV+ + L+ + S L+ GH+ +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQS--------GSIRVWDLEAAKILRTLMGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWD+ C+ GH+ V C+ F+P + S A D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + P H+ PV V+F+ + ++ + S D R WD + + I+
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIE 228
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
E PV V F+P+G + G D+ LR++ +
Sbjct: 229 GEPGPVRSVLFNPDGCCLYSGCQDS-LRVYGW 259
Score = 227 (85.0 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + ++ GH Q
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQD--------TNIKLWDIRRKGCVFRYRGHSQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GHT V V F+P ++ SG+
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T+R WD++ + + + PV +V FN DG + + D L R++ C
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERCFDV 267
Query: 195 LI 196
++
Sbjct: 268 VL 269
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 355 (130.0 bits), Expect = 9.4e-32, P = 9.4e-32
Identities = 79/256 (30%), Positives = 129/256 (50%)
Query: 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + LW + C+ +L GHT+ V V N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+IV+G+ ++R+WD++ K L+ L H + ++DF+ G + + S D ++W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ + V ++FSP+GK++ D+T++LW+ + GK++ + GHT
Sbjct: 133 DIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
+ F N + SGS D + W+L+ +VV +EG PV SV +P + S
Sbjct: 192 VNVVE--FH-PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYS 248
Query: 305 GALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 249 GCQDSLR-VYGWEPER 263
Score = 255 (94.8 bits), Expect = 6.6e-21, P = 6.6e-21
Identities = 59/212 (27%), Positives = 97/212 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH + SV+ + L+ + S L+ GH+ +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQS--------GSIRVWDLEAAKILRTLMGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWD+ C+ GH+ V C+ F+P + S A D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + P H+ PV V+F+ + ++ + S D R WD + + I+
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIE 228
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
E PV V F+P+G + G D+ LR++ +
Sbjct: 229 GEPGPVRSVLFNPDGCCLYSGCQDS-LRVYGW 259
Score = 227 (85.0 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + ++ GH Q
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQD--------TNIKLWDIRRKGCVFRYRGHSQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GHT V V F+P ++ SG+
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T+R WD++ + + + PV +V FN DG + + D L R++ C
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERCFDV 267
Query: 195 LI 196
++
Sbjct: 268 VL 269
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 89/277 (32%), Positives = 131/277 (47%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD STG C+ TL+ +N V V F GKFIL D TLR+W++ + +K
Sbjct: 316 RDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLNAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 77/265 (29%), Positives = 132/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V+TG C+K H + V V N+DGT+I + S D R+W +T
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVG--TLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P + + T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDIS 326
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
T C+ + N GK+I+S ++D + +W+ ++++ ++ L H V
Sbjct: 327 TGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 74/264 (28%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ----STFSVTN-------------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
S++S + G +++SGS D + +W++ + + L GH + V
Sbjct: 284 WAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V H I S A +D+T+++W
Sbjct: 344 VLFHSGGKFILSCA--DDKTLRVW 365
Score = 267 (99.0 bits), Expect = 5.4e-23, P = 5.4e-23
Identities = 68/248 (27%), Positives = 122/248 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S+ ++SG+ D+T+++WD+ TG CL L H +
Sbjct: 281 CISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V F+ G I++ + D R+WD CMKTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 252 (93.8 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 59/199 (29%), Positives = 99/199 (49%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P +++VS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN---QDGTLIASCSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPVISVASHP 297
+L H V ++ P
Sbjct: 268 CKAELREHEHVVECISWAP 286
Score = 246 (91.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 60/198 (30%), Positives = 99/198 (50%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+AS S D+
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFTGHEQG----VSDLVFSSDSR------FLVSASDDKTIRLWDVPTATC 107
++ + + +S+ S + FL+S S DKTI++WD+ T C
Sbjct: 271 ELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 348 (127.6 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 91/317 (28%), Positives = 146/317 (46%)
Query: 4 DQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXX 63
DQ E + Q G + +FS DG+ L + S D
Sbjct: 195 DQEEEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLKY 254
Query: 64 XXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVN 122
+F EQ V L FS DS + S + D I++W + T CL+ HT + C+
Sbjct: 255 QAQDQFMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQ 314
Query: 123 FNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
F+ ++ ++S +FD TVR+ +K+GK LK HS V F DG ++++S DG +
Sbjct: 315 FSRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVK 374
Query: 183 IWDASTGHCMKTLIDDENP-PVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTYT- 239
+W T C+ T N V+ V P N + +V NT+ + N G+I+++++
Sbjct: 375 VWSLKTTECVATYKPLGNELAVNTVLILPKNPEHFIVCNRSNTVVIMNMQ-GQIVRSFSS 433
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
G IS+T S G++I ED +Y + + S K+ + L H VI + HP +
Sbjct: 434 GKREGGAFISATLS-PRGEFIYCAGEDQVLYCFSVSSGKLERTLNVHEKDVIGLTHHPHQ 492
Query: 300 NIIASGALDNDRTVKIW 316
N++AS D +K+W
Sbjct: 493 NLLAS--YSEDGLLKLW 507
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 47/166 (28%), Positives = 81/166 (48%)
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDDE----NPPVSFVKFSPNG 212
V F+ DG ++T S DG +W+ +TG K L D+ V + FS +
Sbjct: 217 VECAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDS 276
Query: 213 KFILVGTLDNTLRLWNYSTGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
+ + G D +++W TG+ L+ + HT C+ FS N + ++S S D V L
Sbjct: 277 EMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQ--FSRDNSQ-VLSASFDYTVRL 333
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317
L+S K++++ +GH+ V P + + S + +D TVK+W+
Sbjct: 334 HGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSAS--SDGTVKVWS 377
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 354 (129.7 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 78/256 (30%), Positives = 129/256 (50%)
Query: 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + LW + C+ +L GHT+ V V N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+IV+G+ ++R+WD++ K L+ L H + ++DF+ G + + S D ++W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ + V ++FSP+GK++ D+T++LW+ + GK++ + GHT
Sbjct: 133 DIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
+ F N + SGS D + W+L+ +VV +EG PV S+ +P + S
Sbjct: 192 VNVVE--FH-PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYS 248
Query: 305 GALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 249 GCQDSLR-VYGWEPER 263
Score = 254 (94.5 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 58/212 (27%), Positives = 97/212 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH + SV+ + L+ + S L+ GH+ +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQS--------GSIRVWDLEAAKILRTLMGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWD+ C+ GH+ V C+ F+P + S A D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + P H+ PV V+F+ + ++ + S D R WD + + I+
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIE 228
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
E PV + F+P+G + G D+ LR++ +
Sbjct: 229 GEPGPVRSILFNPDGCCLYSGCQDS-LRVYGW 259
Score = 226 (84.6 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 53/182 (29%), Positives = 85/182 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + ++ GH Q
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQD--------TNIKLWDIRRKGCVFRYRGHSQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GHT V V F+P ++ SG+
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T+R WD++ + + + PV ++ FN DG + + D L R++ C
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSL-RVYGWEPERCFDV 267
Query: 195 LI 196
++
Sbjct: 268 VL 269
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 337 (123.7 bits), Expect = 3.7e-29, P = 3.7e-29
Identities = 91/254 (35%), Positives = 129/254 (50%)
Query: 66 LQKFT-GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQK GH S + FSSDSR LV+ S D T+RLW+ T KT +GHT V V +
Sbjct: 766 LQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAIS 825
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
IVSG+ E V++WD TG LK L S +V F+ D I DG IW
Sbjct: 826 SDGRQIVSGSI-EAVKLWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAAGFKDGKIFIW 882
Query: 185 DASTGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
DA+ G KTL + +P + + FSP+ K ++ + D+T++ W+ + G + + GH
Sbjct: 883 DAA-GTLQKTL--ERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEA-VGH-- 936
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA-SHPTENII 302
SK+ + S +GK I SGS D + LW+ + + + L GH D V V S I+
Sbjct: 937 SKHVTTMVLS-PDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIV 995
Query: 303 ASGALDNDRTVKIW 316
+ + VKIW
Sbjct: 996 SCSS----EAVKIW 1005
Score = 294 (108.6 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 64/182 (35%), Positives = 101/182 (55%)
Query: 66 LQK-FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQK H + + FS D + LV+ S D TI+ WD+ T ++ +GH+ +V + +
Sbjct: 888 LQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDI-TIGGVQEAVGHSKHVTTMVLS 946
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
P +I SG+ D+T+++WD TG K L H D V V F+ D IV+ S + + +IW
Sbjct: 947 PDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEAV-KIW 1005
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
DA+TG + D+ + V SP+GK I G + ++LW+ +TG +LKT G+ S
Sbjct: 1006 DAATGKVQNSFESDD--VFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGY-RS 1062
Query: 245 KY 246
K+
Sbjct: 1063 KF 1064
Score = 290 (107.1 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 81/250 (32%), Positives = 129/250 (51%)
Query: 73 EQGVSDL---VFSSDSRFLVSA--SDDKT-IRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
EQG L FS+D + + + S D T I L+D T K L GH++ + F+
Sbjct: 726 EQGGYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSD 785
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
S +V+G+ D TVR+W+ TG K H+ V +V + DG IV+ S + + ++WDA
Sbjct: 786 SRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAV-KLWDA 844
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
+TG +KTL V FSP+ + I G D + +W+ + G + KT H +
Sbjct: 845 ATGDLLKTLASGF---AGSVAFSPDSRQIAAGFKDGKIFIWD-AAGTLQKTLERHPGA-- 898
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
+S FS + K +V+ S DS + W++ V Q+ GH+ V ++ P +IASG+
Sbjct: 899 IMSIAFS-PDVKQLVTCSTDSTIKRWDITIGGV-QEAVGHSKHVTTMVLSPDGKVIASGS 956
Query: 307 LDNDRTVKIW 316
D +T+K+W
Sbjct: 957 AD--KTIKLW 964
Score = 290 (107.1 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 79/252 (31%), Positives = 120/252 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK-FTGHE 73
L + L GH S++ FS D R L + S D L+K F GH
Sbjct: 766 LQKILKGHSHECSTMAFSSDSRQLVTGSVD---------CTVRLWNTTTGDLEKTFVGHT 816
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V + SSD R +VS S + ++LWD T LKTL + + V F+P S I +G
Sbjct: 817 GTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAAG 873
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
D + IWD G K L H + ++ F+ D +VT S D + WD + G +
Sbjct: 874 FKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQE 932
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
+ ++ V+ + SP+GK I G+ D T++LW+ +TG + KT TGH ++ + FS
Sbjct: 933 AVGHSKH--VTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKV--VFS 988
Query: 254 VTNGKYIVSGSE 265
+ N + + SE
Sbjct: 989 LDNRQIVSCSSE 1000
Score = 240 (89.5 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 62/231 (26%), Positives = 115/231 (49%)
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ FS DSR + + D I +WD T KTL H + + F+P +V+ + D T
Sbjct: 861 VAFSPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDST 919
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
++ WD+ G + + HS VT + + DG +I + S D ++WDA+TG KTL
Sbjct: 920 IKRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGH 978
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258
+ V V FS + + I V +++W+ +TGK+ ++ ++ + I + +GK
Sbjct: 979 LDT-VEKVVFSLDNRQI-VSCSSEAVKIWDAATGKVQNSF--ESDDVFTIVAVSP--DGK 1032
Query: 259 YIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+I SG + + LW++ + +++ + G+ S+ + +I A+ N
Sbjct: 1033 HIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFN 1083
Score = 174 (66.3 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 55/199 (27%), Positives = 92/199 (46%)
Query: 21 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK-FTGHEQGVSDL 79
GH + ++++ S DG+++AS SADK LQK TGH V +
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGD---------LQKTLTGHLDTVEKV 985
Query: 80 VFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC-VNFNPQSNMIVSGAFDET 138
VFS D+R +VS S + +++WD T + ++ VF V +P I SG +
Sbjct: 986 VFSLDNRQIVSCSSE-AVKIWDAATGKVQNSF--ESDDVFTIVAVSPDGKHIASGHCNGR 1042
Query: 139 VRIWDVKTGKCLKVLPAH----------------------SDPVTAVDFNRDGTMIVTSS 176
+++WD+ TG LK + + + +T + F+ D +I+++S
Sbjct: 1043 IKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTS 1102
Query: 177 YDGLCRIWDASTGHCMKTL 195
D ++WDA+TG K L
Sbjct: 1103 TDRAIKLWDAATGDLQKRL 1121
Score = 147 (56.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 35/91 (38%), Positives = 48/91 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG-HTN--Y----- 117
+Q TGH + V + FS D + + S SD I+LWD T + KTL G H Y
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQE 672
Query: 118 -VFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
V + F P S +I+SG +D +V +WD TG
Sbjct: 673 QVKAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 147 (56.8 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 66/273 (24%), Positives = 108/273 (39%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D++++ + T L +TL GHL + V FS D R + S S++
Sbjct: 956 SADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE----------AVKIW 1005
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGH----- 114
+Q + + + S D + + S + I+LWD+ T + LKT+ G+
Sbjct: 1006 DAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKFD 1065
Query: 115 ---TNYVFCVN--------------FNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS 157
T VF + F+P + +I+S + D +++WD TG K LP HS
Sbjct: 1066 SLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHS 1125
Query: 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217
D + F+R +S Y W S V FS +G+ I
Sbjct: 1126 DSIITDAFSR------SSGYPN----WIFS------------------VAFSSDGQHIAA 1157
Query: 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ D T+R+W+ Y G + SS
Sbjct: 1158 ASADKTIRVWSIEKSLKASKYLGRAVGSHIKSS 1190
Score = 138 (53.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 40/132 (30%), Positives = 62/132 (46%)
Query: 117 YVFCVNFNPQSNMIVSGAFDETVRIW--------DVKTGKCLKVLPAHSDPVTAVDFNRD 168
Y + F+P+S+ +V G V +W D T ++ L HS+ V V F+ D
Sbjct: 574 YSSAIIFSPESS-VVKGENLHKVPVWLGRAPPMEDSWT-PMIQTLTGHSEAVWRVAFSPD 631
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDD--------ENPPVSFVKFSPNGKFILVGTL 220
G I + S GL ++WD +TG KTL + V + F P+ K I+ G
Sbjct: 632 GKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYY 691
Query: 221 DNTLRLWNYSTG 232
D ++ LW+ +TG
Sbjct: 692 DGSVMLWDTTTG 703
Score = 134 (52.2 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP-AH--------SD 158
++TL GH+ V+ V F+P I SG+ +++WD TG K L +H +
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQE 672
Query: 159 PVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
V A+ F D +I++ YDG +WD +TG
Sbjct: 673 QVKAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 99 (39.9 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 8 ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSS-ADKXXXXXXXXXXXXXXXXXXXXL 66
+S+ P + QTL GH A+ V FS DG+ +AS S +
Sbjct: 607 DSWTP--MIQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPK 664
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104
+++ ++ V + F DS+ ++S D ++ LWD T
Sbjct: 665 RRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTT 702
Score = 97 (39.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 200 NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS----KYCISS----- 250
N ++ + FSP+ K IL + D ++LW+ +TG + K H++S + SS
Sbjct: 1083 NTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNW 1142
Query: 251 TFSV---TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENI 301
FSV ++G++I + S D + +W ++ K G +S P + I
Sbjct: 1143 IFSVAFSSDGQHIAAASADKTIRVWSIEKSLKASKYLGRAVGSHIKSSRPWKEI 1196
Score = 68 (29.0 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 256 NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA---SHPTENIIASGALDND-- 310
+ K I+S S D + LW+ + + ++L H+D +I+ A S N I S A +D
Sbjct: 1094 DAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQ 1153
Query: 311 --------RTVKIWTQEK 320
+T+++W+ EK
Sbjct: 1154 HIAAASADKTIRVWSIEK 1171
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 87/303 (28%), Positives = 147/303 (48%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L + GH AI+SV FS G+ LA++S D ++ GH+
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAF--------RYVGHKD 61
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSG 133
V+ + FS L SAS D+T+RLW +P + HT V V+F+ + +
Sbjct: 62 VVTSVQFSPLGNLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D+++++W++ + L L H+ V F+ DG +IV+ S D +IWD + C+
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
D +FV F+PNG I D+T+++W+ K+L+ Y H+ C+S F
Sbjct: 181 NFSDSVGF-ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS--FH 237
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313
+G YI++ S D + + +L +++ L+GHT PV +V+ + +SG D V
Sbjct: 238 -PSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQ--V 294
Query: 314 KIW 316
+W
Sbjct: 295 LLW 297
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 87/277 (31%), Positives = 130/277 (46%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH ++ + F H G+LLAS SAD ++ GH+ V
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFEC--------IRTMHGHDHNV 195
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + +VSAS DKTI++W+V T C+KT GH +V V N +I S + D
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSND 255
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--------------------NRDGTMIVTSS 176
+TVR+W V T +C L H V + + + G +++ S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGS 315
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D ++WD S G C+ TL+ +N V V P GK+I+ D TLR+W+Y + K
Sbjct: 316 RDKTIKMWDVSIGMCLMTLVGHDNW-VRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTK 374
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T + H + + S F T Y+V+GS D V +WE
Sbjct: 375 TLSAHEH--FVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 81/265 (30%), Positives = 131/265 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F + L S S D TI+LWD C++T+ GH + V V P + I
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+T+++W+V TG C+K H + V V N+DGT+I +SS D R+W +T
Sbjct: 208 VSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKE 267
Query: 191 CMKTLIDDENPPVSFVKFSPNGKF--ILVGTLDNTLR-------LWNYSTGKILKTYTGH 241
C L + E+ V + ++P IL T T + L + S K +K +
Sbjct: 268 CKAELREHEHV-VECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWD-- 324
Query: 242 TNSKYCISSTFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291
+ C+ + N GKYIVS ++D + +W+ ++++ + L H V
Sbjct: 325 VSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVT 384
Query: 292 SVASHPTENIIASGALDNDRTVKIW 316
S+ H T + +G++D +TVK+W
Sbjct: 385 SLDFHKTAPYVVTGSVD--QTVKVW 407
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 77/264 (29%), Positives = 135/264 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V+ ++F +VSAS+D TI++WD T +TL GHT+ V ++F+ +
Sbjct: 105 SGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKL 164
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD + +C++ + H V++V +G IV++S D ++W+ +TG
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATG 224
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KT V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 225 YCVKTFTGHREW-VRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 250 ------------STFSVTN-----GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
+T S T G +++SGS D + +W++ + L GH + V
Sbjct: 284 WAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRG 343
Query: 293 VASHPTENIIASGALDNDRTVKIW 316
V HP I S A +D+T++IW
Sbjct: 344 VLVHPGGKYIVSCA--DDKTLRIW 365
Score = 261 (96.9 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 65/205 (31%), Positives = 104/205 (50%)
Query: 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
W +P L GH + V V F+P ++IVS + D T+++WD +TG + L H+D
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDS 152
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVG 218
V + F+ G ++ + S D ++WD C++T+ D N VS V PNG I+
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVAIMPNGDHIVSA 210
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ D T+++W +TG +KT+TGH + +G I S S D V +W + +++
Sbjct: 211 SRDKTIKMWEVATGYCVKTFTGHREWVRMVRPN---QDGTLIASSSNDQTVRVWVVATKE 267
Query: 279 VVQKLEGHTDPV--ISVA---SHPT 298
+L H V IS A +HPT
Sbjct: 268 CKAELREHEHVVECISWAPESAHPT 292
Score = 251 (93.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 68/248 (27%), Positives = 119/248 (47%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYC-- 226
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S+S+D+T+R+W V T C L H + V
Sbjct: 227 ------VKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 120 CVNFNPQSN--------------------MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
C+++ P+S ++SG+ D+T+++WDV G CL L H +
Sbjct: 281 CISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNW 340
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
V V + G IV+ + D RIWD C KTL E+ V+ + F +++ G+
Sbjct: 341 VRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHF-VTSLDFHKTAPYVVTGS 399
Query: 220 LDNTLRLW 227
+D T+++W
Sbjct: 400 VDQTVKVW 407
Score = 246 (91.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 62/198 (31%), Positives = 98/198 (49%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXX--X 57
S D++++ + T +T GH + V+ + DG L+ASSS D+
Sbjct: 211 SRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKA 270
Query: 58 XXXXXXXXLQKFTGHEQGVSDLVFS---SDSR-------FLVSASDDKTIRLWDVPTATC 107
++ + + + S+++ FL+S S DKTI++WDV C
Sbjct: 271 ELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMC 330
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L TL+GH N+V V +P IVS A D+T+RIWD K +C K L AH VT++DF++
Sbjct: 331 LMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHK 390
Query: 168 DGTMIVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 391 TAPYVVTGSVDQTVKVWE 408
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L GH+ V ++ +++VS +DDKT+R+WD C KTL H ++V ++F+
Sbjct: 331 LMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHK 390
Query: 126 QSNMIVSGAFDETVRIWDVK 145
+ +V+G+ D+TV++W+ +
Sbjct: 391 TAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 83/273 (30%), Positives = 129/273 (47%)
Query: 1 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
M S + S +P L GH A+ V+FS G L+AS S DK
Sbjct: 40 MDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTV 99
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC 120
F H V + FSSD + LV+ASDDKTI++W V L +L H N+V C
Sbjct: 100 --------FKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRC 151
Query: 121 VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGL 180
F+P +I S + D+TV++WD + +C+ H V+F+ GT I + D
Sbjct: 152 ARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKT 211
Query: 181 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240
++WD ++ V+ + F P+G +++ + D+TL++ + G++L T G
Sbjct: 212 VKVWDVRMNRLLQHY-QVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHG 270
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
H C++ FS T G + SG D V +W+
Sbjct: 271 HQGPATCVA--FSRT-GDFFASGGSDEQVMVWK 300
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 85/304 (27%), Positives = 143/304 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + GH AI+SV FS + + LAS S D GH+
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYC--------LVGHK 62
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
V + FS + S S DKT+ LW VP+ T+ HT V V+F+ +V+
Sbjct: 63 DAVMCVQFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVT 121
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D+T+++W V K L L H + V F+ DG +I ++S D ++WD ++ C+
Sbjct: 122 ASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECI 181
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ + + V+F P+G I D T+++W+ ++L+ Y HT + ++S
Sbjct: 182 HSFCE-HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAA---VNSLS 237
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G Y+++ S DS + + +L +++ L GH P VA T + ASG +D
Sbjct: 238 FHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGG--SDEQ 295
Query: 313 VKIW 316
V +W
Sbjct: 296 VMVW 299
Score = 130 (50.8 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
++ V FS N K + G++D+ L++W+ GH ++ C+ FS +G + S
Sbjct: 23 ITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQ--FS-PSGHLVAS 79
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVA-SHPTENIIASGALDNDRTVKIWTQEKE 321
GS D V LW + + HT V SV S ++++ + +D+T+K+WT ++
Sbjct: 80 GSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTAS---DDKTIKVWTVHRQ 136
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 87/303 (28%), Positives = 146/303 (48%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L + GH AI+SV FS +G+ LA+ S D ++ GH+
Sbjct: 10 LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAF--------RYVGHKD 61
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSG 133
++ + FS L SAS D+TIRLW +P + HT V V+F+ + S
Sbjct: 62 VITSVQFSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLASA 120
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D+++++W++ + L L H+ V F+ DG +IV+ S D +IWD + C+
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
D +FV F+PNG I D+T+++W+ K+L+ Y H+ C+S F
Sbjct: 181 NFSDFVGF-ANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS--FH 237
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313
+G Y+++ S D + + +L +++ L+GHT PV +V+ + SG D V
Sbjct: 238 -PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQ--V 294
Query: 314 KIW 316
+W
Sbjct: 295 LLW 297
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 83/266 (31%), Positives = 131/266 (49%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
L S RP GH I+SV+FS G LLAS+S D+
Sbjct: 44 LWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSS------- 96
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+F H V + FS+D +FL SAS+DK+I++W++ L +L HT++V C F+P
Sbjct: 97 -EFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPD 155
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+IVS + D+T++IWD +C+ V FN +GT I ++ D +IWD
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDI 215
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
++ + V+ V F P+G +++ + D TL++ + G+++ T GHT +
Sbjct: 216 RVNKLLQHY-QVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF 274
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLW 272
+S FS G+ SG D+ V LW
Sbjct: 275 TVS--FS-KGGELFTSGGADAQVLLW 297
Score = 126 (49.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 234 ILKTY-TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
+L+ Y GH K I+S NGK + +GS D+ + LW L+ + + GH D + S
Sbjct: 9 VLERYFKGH---KAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITS 65
Query: 293 VASHPTENIIASGALDNDRTVKIWTQEK 320
V P N++AS + DRT+++W +K
Sbjct: 66 VQFSPLGNLLASAS--RDRTIRLWIPDK 91
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 348 (127.6 bits), Expect = 3.4e-31, P = 3.4e-31
Identities = 82/253 (32%), Positives = 136/253 (53%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH GV S R++VS S D+T+++W + L TL GHT+ V C+ +++
Sbjct: 294 GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSIL 351
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
V+G+ D T+R+WDV++G+ L L H V V F DGT +V+ YD +IW+A TG
Sbjct: 352 VTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGR 409
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST--GK-ILKTYTGHTNSKYC 247
C++TL N S + F + G+LD ++R+W+++ G+ + GHT+
Sbjct: 410 CIRTLTGHNNRVYSLL-FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS---- 464
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
++S + G +VS + DS V +W++ V L GH + S+ N++A+ +
Sbjct: 465 LTSGMQL-RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG-RNMVATSS- 521
Query: 308 DNDRTVKIWTQEK 320
+D TVK+W E+
Sbjct: 522 -DDGTVKLWDIER 533
Score = 309 (113.8 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 77/249 (30%), Positives = 125/249 (50%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GHE V + D LV+ SDD T+++W + + TL+GHT V+ + I
Sbjct: 253 GHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYI 311
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VSG+ D TV++W G L L H+ V + G+++VT S D R+WD +G
Sbjct: 312 VSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGR 369
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ TL + V V+F +G ++ G D T+++WN TG+ ++T TGH N Y S
Sbjct: 370 HLATL-HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVY--SL 424
Query: 251 TFSVTNGKYIVSGSEDSCVYLWEL---QSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
F + + SGS D+ + +W+ + ++ V L+GHT ++ NI+ S
Sbjct: 425 LFE-SERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--LTSGMQLRGNILVS--C 479
Query: 308 DNDRTVKIW 316
+ D V++W
Sbjct: 480 NADSHVRVW 488
Score = 259 (96.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 80/306 (26%), Positives = 137/306 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH + + + S GR + S S D+ L GH V
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSL--------LHTLQGHTSTVR 342
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ + LV+ S D T+R+WDV + L TL GH V CV F+ +VSG +D
Sbjct: 343 CMAMAGS--ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDF 398
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST--GHCMKTL 195
TV+IW+ TG+C++ L H++ V ++ F + +++ + S D R+WD + G L
Sbjct: 399 TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 196 IDDENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254
+ S ++ N ILV D+ +R+W+ G + +GH ++ I+S
Sbjct: 459 LQGHTSLTSGMQLRGN---ILVSCNADSHVRVWDIHEGTCVHMLSGHRSA---ITS-LQW 511
Query: 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLE-----GHTDPVISVASHPTENIIASGALDN 309
+ + S+D V LW+++ +++ L G+ + + S T A G+ +N
Sbjct: 512 FGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWRLCSTSTMLACAVGSRNN 571
Query: 310 DRTVKI 315
K+
Sbjct: 572 TEETKV 577
Score = 249 (92.7 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 62/233 (26%), Positives = 115/233 (49%)
Query: 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF-CVNFNPQSNMIVSGAFDETVRIWD 143
SR+L + DK + W+ L GH ++V C+ + +++V+G+ D T+++W
Sbjct: 228 SRYLRA---DKIEKNWNANPIMGSAVLRGHEDHVITCMQIH--DDVLVTGSDDNTLKVWC 282
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPV 203
+ G+ + L H+ V ++ G IV+ S D ++W G + TL V
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTL-QGHTSTV 341
Query: 204 SFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263
+ + G ++ G+ D TLR+W+ +G+ L T GH + C+ F +G +VSG
Sbjct: 342 RCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ--F---DGTTVVSG 394
Query: 264 SEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
D V +W + + ++ L GH + V S+ +I+ SG+LD ++++W
Sbjct: 395 GYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDT--SIRVW 445
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH + S+ F + ++ S S D LQ GH
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLD--TSIRVWDFTRPEGQECVALLQ---GHTSLT 466
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + LVS + D +R+WD+ TC+ L GH + + + + + NM+ + + D
Sbjct: 467 SGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDD 523
Query: 137 ETVRIWDVKTGKCLKVL 153
TV++WD++ G ++ L
Sbjct: 524 GTVKLWDIERGALIRDL 540
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 348 (127.6 bits), Expect = 3.4e-31, P = 3.4e-31
Identities = 82/253 (32%), Positives = 136/253 (53%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH GV S R++VS S D+T+++W + L TL GHT+ V C+ +++
Sbjct: 294 GHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSIL 351
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
V+G+ D T+R+WDV++G+ L L H V V F DGT +V+ YD +IW+A TG
Sbjct: 352 VTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGR 409
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST--GK-ILKTYTGHTNSKYC 247
C++TL N S + F + G+LD ++R+W+++ G+ + GHT+
Sbjct: 410 CIRTLTGHNNRVYSLL-FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS---- 464
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
++S + G +VS + DS V +W++ V L GH + S+ N++A+ +
Sbjct: 465 LTSGMQL-RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG-RNMVATSS- 521
Query: 308 DNDRTVKIWTQEK 320
+D TVK+W E+
Sbjct: 522 -DDGTVKLWDIER 533
Score = 309 (113.8 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 77/249 (30%), Positives = 125/249 (50%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GHE V + D LV+ SDD T+++W + + TL+GHT V+ + I
Sbjct: 253 GHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYI 311
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VSG+ D TV++W G L L H+ V + G+++VT S D R+WD +G
Sbjct: 312 VSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGR 369
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ TL + V V+F +G ++ G D T+++WN TG+ ++T TGH N Y S
Sbjct: 370 HLATL-HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVY--SL 424
Query: 251 TFSVTNGKYIVSGSEDSCVYLWEL---QSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
F + + SGS D+ + +W+ + ++ V L+GHT ++ NI+ S
Sbjct: 425 LFE-SERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--LTSGMQLRGNILVS--C 479
Query: 308 DNDRTVKIW 316
+ D V++W
Sbjct: 480 NADSHVRVW 488
Score = 259 (96.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 80/306 (26%), Positives = 137/306 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH + + + S GR + S S D+ L GH V
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSL--------LHTLQGHTSTVR 342
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ + LV+ S D T+R+WDV + L TL GH V CV F+ +VSG +D
Sbjct: 343 CMAMAGS--ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDF 398
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST--GHCMKTL 195
TV+IW+ TG+C++ L H++ V ++ F + +++ + S D R+WD + G L
Sbjct: 399 TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL 458
Query: 196 IDDENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254
+ S ++ N ILV D+ +R+W+ G + +GH ++ I+S
Sbjct: 459 LQGHTSLTSGMQLRGN---ILVSCNADSHVRVWDIHEGTCVHMLSGHRSA---ITS-LQW 511
Query: 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLE-----GHTDPVISVASHPTENIIASGALDN 309
+ + S+D V LW+++ +++ L G+ + + S T A G+ +N
Sbjct: 512 FGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWRLCSTSTMLACAVGSRNN 571
Query: 310 DRTVKI 315
K+
Sbjct: 572 TEETKV 577
Score = 249 (92.7 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 62/233 (26%), Positives = 115/233 (49%)
Query: 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF-CVNFNPQSNMIVSGAFDETVRIWD 143
SR+L + DK + W+ L GH ++V C+ + +++V+G+ D T+++W
Sbjct: 228 SRYLRA---DKIEKNWNANPIMGSAVLRGHEDHVITCMQIH--DDVLVTGSDDNTLKVWC 282
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPV 203
+ G+ + L H+ V ++ G IV+ S D ++W G + TL V
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTL-QGHTSTV 341
Query: 204 SFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263
+ + G ++ G+ D TLR+W+ +G+ L T GH + C+ F +G +VSG
Sbjct: 342 RCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ--F---DGTTVVSG 394
Query: 264 SEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
D V +W + + ++ L GH + V S+ +I+ SG+LD ++++W
Sbjct: 395 GYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDT--SIRVW 445
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH + S+ F + ++ S S D LQ GH
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLD--TSIRVWDFTRPEGQECVALLQ---GHTSLT 466
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + + LVS + D +R+WD+ TC+ L GH + + + + + NM+ + + D
Sbjct: 467 SGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDD 523
Query: 137 ETVRIWDVKTGKCLKVL 153
TV++WD++ G ++ L
Sbjct: 524 GTVKLWDIERGALIRDL 540
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 85/302 (28%), Positives = 143/302 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L ++ GH AI+S FS + + +A++S D ++ GH+
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAY--------RYVGHKD 61
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V+ L FS L SAS D+T+RLW + HT V V+F+ ++V+ +
Sbjct: 62 VVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTAS 121
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D+++++W + + L L H+ V F+ DG +IV+ S D +IWD + C+
Sbjct: 122 EDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254
D +FV F+PNG I D+ +++W+ K+L+ Y H+ C+S F
Sbjct: 182 FSDSVGF-ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLS--FHP 238
Query: 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314
G +V+ S D V + +L +++ L+GHT PV +V+ ++ SG D V
Sbjct: 239 L-GNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQ--VL 295
Query: 315 IW 316
IW
Sbjct: 296 IW 297
Score = 322 (118.4 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 77/266 (28%), Positives = 132/266 (49%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
L S +P+ GH ++S++FS G LLAS+S D+
Sbjct: 44 LWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSS------- 96
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+F H V + FS+D + LV+AS+DK+I++W + L +L HT++V C F+P
Sbjct: 97 -EFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPD 155
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+IVS + D+T++IWD +C+ VDFN +GT I ++ D +IWD
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDI 215
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
++ + V+ + F P G ++ + D T+++ + G+++ T GHT +
Sbjct: 216 RMNKLLQHY-QVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVF 274
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLW 272
+S FS +G+ + SG D+ V +W
Sbjct: 275 TVS--FS-KDGELLTSGGADAQVLIW 297
Score = 188 (71.2 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 53/193 (27%), Positives = 90/193 (46%)
Query: 2 SSDQSLE---SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXX 58
S D+S++ FR L +L H + KFS DGRL+ S S DK
Sbjct: 121 SEDKSIKVWSMFRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC- 178
Query: 59 XXXXXXXLQKFTGHEQGVSDLV-FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNY 117
+ F+ G ++ V F+ + + SA D +++WD+ L+ H+
Sbjct: 179 -------VNNFSD-SVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG 230
Query: 118 VFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY 177
V C++F+P N +V+ + D TV++ D+ G+ + L H+ PV V F++DG ++ +
Sbjct: 231 VNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGA 290
Query: 178 DGLCRIWDASTGH 190
D IW + H
Sbjct: 291 DAQVLIWRTNFIH 303
Score = 37 (18.1 bits), Expect = 4.0e-31, Sum P(2) = 4.0e-31
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 273 ELQSRKVVQKLEGHTDPVISVAS 295
E+ ++ V L+ + PV+ V S
Sbjct: 343 EINPKREVMDLQSSSPPVVDVLS 365
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 345 (126.5 bits), Expect = 5.3e-31, P = 5.3e-31
Identities = 87/298 (29%), Positives = 138/298 (46%)
Query: 21 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV 80
G R ++ FS DG++LA+ S + H++ +D+V
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLS-------GVTKLWEMPQVTNTIAVLKDHKERATDVV 305
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140
FS L +AS D+T +LW T L+T GH + + V F+P + + ++D+T R
Sbjct: 306 FSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWR 364
Query: 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN 200
+WD+ TG L + HS V + F +DG + + D L R+WD TG + +
Sbjct: 365 LWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI-LVFQGHI 423
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST-FSVTNGKY 259
PV V FSPNG + G DN R+W+ K L H N +S + G +
Sbjct: 424 KPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHAN---LVSQVKYEPQEGYF 480
Query: 260 IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317
+ + S D V +W + +V+ L GH V S+ + IA+ + +DRT+K+WT
Sbjct: 481 LATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIAT--VSHDRTIKLWT 536
Score = 270 (100.1 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 72/255 (28%), Positives = 114/255 (44%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L H + V FS LA++SAD+ LQ F GH ++
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTL---------LQTFEGHLDRLAR 344
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ F ++L + S DKT RLWD+ T L GH+ V+ + F + S D
Sbjct: 345 VAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSL 404
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
R+WD++TG+ + V H PV +V+F+ +G + + D CRIWD + +
Sbjct: 405 ARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAH 464
Query: 199 ENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNG 257
N VS VK+ P G F+ + D + +W+ ++K+ GH SK ++S +
Sbjct: 465 ANL-VSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGH-ESK--VASLDITADS 520
Query: 258 KYIVSGSEDSCVYLW 272
I + S D + LW
Sbjct: 521 SCIATVSHDRTIKLW 535
Score = 267 (99.0 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 68/231 (29%), Positives = 109/231 (47%)
Query: 2 SSDQSLESFRPY-TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
S+D++ + ++ TL QT GHL ++ V F G+ L ++S DK
Sbjct: 317 SADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELL- 375
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC 120
LQ+ GH + V + F D S D R+WD+ T + GH VF
Sbjct: 376 -----LQE--GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFS 428
Query: 121 VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN-RDGTMIVTSSYDG 179
VNF+P + SG D RIWD++ K L ++PAH++ V+ V + ++G + T+SYD
Sbjct: 429 VNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDM 488
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
IW +K+L E+ V+ + + + I + D T++LW S
Sbjct: 489 KVNIWSGRDFSLVKSLAGHESK-VASLDITADSSCIATVSHDRTIKLWTSS 538
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 350 (128.3 bits), Expect = 5.5e-31, P = 5.5e-31
Identities = 78/240 (32%), Positives = 131/240 (54%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
++D + SDD R+ D TA+ LK L GH+ V+ +F+P N ++S + D TVR+
Sbjct: 490 AADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRL 549
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN- 200
W ++T CL H+ PV F+ G V+ +D + R+W +T H I +
Sbjct: 550 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHL 607
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V+ +F PN +I G+ D T+RLW+ G ++ +TGH + ++ FS NG+++
Sbjct: 608 ADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLA--FS-PNGRFL 664
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
+G+ D V LW++ +V +L+GHTD + ++ I+ASG++DN TV++W K
Sbjct: 665 ATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDN--TVRLWDAVK 722
Score = 280 (103.6 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 64/210 (30%), Positives = 95/210 (45%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + FS D L S S D L + GH V D
Sbjct: 519 LYGHSGPVYGTSFSPDRNYLLSCSED--------GTVRLWSLQTFTCLVGYKGHNYPVWD 570
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
FS + VS D+ RLW L+ GH V C F+P SN I +G+ D T
Sbjct: 571 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRT 630
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
VR+WDV G C+++ H P+ ++ F+ +G + T + DG +WD G M +
Sbjct: 631 VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHG-LMVGELKG 689
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ ++FS +G+ + G++DNT+RLW+
Sbjct: 690 HTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 265 (98.3 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 74/240 (30%), Positives = 109/240 (45%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F QG++ + + DS +V D T+R+W V T L++ V +
Sbjct: 446 FLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSV-TPKKLRS----------VKAAADLS 494
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+I + D RI D KT LK+L HS PV F+ D +++ S DG R+W T
Sbjct: 495 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQT 554
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C+ N PV +FSP G + + G D RLW + L+ + GH C
Sbjct: 555 FTCLVGY-KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTC- 612
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ F N YI +GS D V LW++ + V+ GH P+ S+A P +A+GA D
Sbjct: 613 -TRFH-PNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATD 670
Score = 237 (88.5 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ F GH V+ F +S ++ + S D+T+RLWDV C++ GH + + F+P
Sbjct: 600 LRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 659
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ +GA D V +WD+ G + L H+D + A+ F+RDG ++ + S D R+WD
Sbjct: 660 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Query: 186 ASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGT 219
A ++T DD + N + +L+GT
Sbjct: 720 AVKAFEDLET--DDFTTATGHINLPENSQDLLLGT 752
Score = 215 (80.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 65/202 (32%), Positives = 89/202 (44%)
Query: 107 CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN 166
C T + + V+ S+MIV G D TVR+W V T K L+ + A +D ++ +D
Sbjct: 442 CFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSV-TPKKLRSVKAAAD-LSLIDKE 499
Query: 167 RDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRL 226
D D L RI D T +K L P V FSP+ ++L + D T+RL
Sbjct: 500 SD---------DVLERIMDEKTASELKILYGHSGP-VYGTSFSPDRNYLLSCSEDGTVRL 549
Query: 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH 286
W+ T L Y GH Y + T G Y VSG D LW + ++ GH
Sbjct: 550 WSLQTFTCLVGYKGHN---YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 606
Query: 287 TDPVISVASHPTENIIASGALD 308
V HP N IA+G+ D
Sbjct: 607 LADVTCTRFHPNSNYIATGSAD 628
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 354 (129.7 bits), Expect = 5.7e-31, P = 5.7e-31
Identities = 78/246 (31%), Positives = 133/246 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V + S +R +VS SDD T+++W CL+TL+GHT V+ + N+I
Sbjct: 992 GHDDHVITCLQFSGNR-IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS--GNII 1048
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T+++WD+ +G C+ L H+ V + + G+ +V+ S D R+WD G
Sbjct: 1049 ISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGS 1106
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ L+ V V++ +GK I+ G D +++W+ + L T GHTN Y +
Sbjct: 1107 CLHVLVG-HLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQ- 1162
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G ++VSGS D+ + +W++++ L GH ++ +NI+ SG D+
Sbjct: 1163 -F---DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQS--LTSGMELRQNILVSGNADS- 1215
Query: 311 RTVKIW 316
TVK+W
Sbjct: 1216 -TVKVW 1220
Score = 324 (119.1 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 90/305 (29%), Positives = 155/305 (50%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH + S + S G ++ S S D+ LQ GH V
Sbjct: 1029 RTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVHT-----LQ---GHTSTV 1078
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ +VS S D T+R+WD+ +CL L+GH V CV ++ +IVSGA+D
Sbjct: 1079 RCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYD 1134
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
V+IW + +CL L H++ V ++ F DG +V+ S D R+WD TG+C TL+
Sbjct: 1135 YMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLM 1192
Query: 197 DDENPPVSFVKFSPNGKFILV-GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT 255
++ S ++ N ILV G D+T+++W+ +TG+ L+T +G +K+ + T
Sbjct: 1193 GHQSL-TSGMELRQN---ILVSGNADSTVKVWDITTGQCLQTLSGP--NKHHSAVTCLQF 1246
Query: 256 NGKYIVSGSEDSCVYLWELQSRKVVQKL----EGHTDPVI-SVASHPTENIIASGALDND 310
N +++V+ S+D V LW++++ ++ L G + V+ + ++ T+ I A G+ +
Sbjct: 1247 NSRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGT 1306
Query: 311 RTVKI 315
K+
Sbjct: 1307 EETKL 1311
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 88/297 (29%), Positives = 142/297 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH I + +F +G LL SS D+ + +GH V +
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCEN-------VMAMSGHSGAVME 103
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDE 137
F+ D + + S DKT+ WD+ T + GH N+V V + + ++ SG+ D
Sbjct: 104 AHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDR 163
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
T++IWD + L + VTAV F G +++ D +IWD + L
Sbjct: 164 TIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHL-R 221
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWN---YSTG-KILKTYTGHTNS--KYCISST 251
+ ++ + SP G FIL +DNTLR+W+ Y+ G + +K + GH ++ K +
Sbjct: 222 GHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCA 281
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S + K I SGS D VY+W++ +R+++ KL GH V +V P E +I SG+ D
Sbjct: 282 WSPGSDK-ITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSD 337
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 74/264 (28%), Positives = 118/264 (44%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
++GH A+ F+ DG + + S DK ++F GH V+
Sbjct: 94 MSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQ--------RRFKGHGNFVNS 145
Query: 79 LVFSS-DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
+ S + L S SDD+TI++WD TL V V F ++SG D
Sbjct: 146 VQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDN 204
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA---STGH-CMK 193
V+IWD++ L L HSD +T + + +G I+T++ D R+WD + G C+K
Sbjct: 205 EVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVK 264
Query: 194 TLIDDE-NPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ N + ++ +SP I G+ D + +W+ +T +IL GH S +
Sbjct: 265 VFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVD- 323
Query: 251 TFSVTNGKYIVSGSEDSCVYLWEL 274
FS I+SGS D +YL E+
Sbjct: 324 -FSPKE-PLILSGSSDKTLYLGEI 345
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 60/210 (28%), Positives = 105/210 (50%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDFNRD 168
L GH +F F+P+ +++S FD + IW V C V+ HS V F D
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYED-CENVMAMSGHSGAVMEAHFTPD 109
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV-GTLDNTLRLW 227
G+ I T S D WD +TG + N V+ V+ S G+ +L G+ D T+++W
Sbjct: 110 GSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNF-VNSVQGSRRGQQLLCSGSDDRTIKIW 168
Query: 228 NYSTGKILKTYTGHT-NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH 286
+ K + HT S + +++ G+ ++SG D+ V +W+++ + V+ L GH
Sbjct: 169 DAR-----KKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGH 223
Query: 287 TDPVISVASHPTENIIASGALDNDRTVKIW 316
+D + ++ P + I + A+DN T+++W
Sbjct: 224 SDTITGMSLSPEGDFILTNAMDN--TLRVW 251
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 29/117 (24%), Positives = 59/117 (50%)
Query: 207 KFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE 265
+F P G+ +L D + +W Y + + +GH+ + + +G +I + S
Sbjct: 62 EFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGA---VMEAHFTPDGSHIFTCST 118
Query: 266 DSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRTVKIWTQEKE 321
D + W++ + + ++ +GH + V SV S + ++ SG+ +DRT+KIW K+
Sbjct: 119 DKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGS--DDRTIKIWDARKK 173
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 34/148 (22%), Positives = 66/148 (44%)
Query: 1 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
+ ++ + R + L GH I+ + S +G + +++ D
Sbjct: 202 IDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGER 261
Query: 61 XXXXXLQKFTGH----EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTN 116
++ F GH E+ + +S S + S S D+ + +WDV T L L GH
Sbjct: 262 C----VKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNG 317
Query: 117 YVFCVNFNPQSNMIVSGAFDETVRIWDV 144
V V+F+P+ +I+SG+ D+T+ + ++
Sbjct: 318 SVNAVDFSPKEPLILSGSSDKTLYLGEI 345
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 81/245 (33%), Positives = 134/245 (54%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
+ ++ GH + DL DS S DK I++WDV T + L GH + + +N
Sbjct: 49 IHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNE 108
Query: 126 QSNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
S+++ SG+FD VR+WD ++ ++VL D V+++D +IVT S DG R
Sbjct: 109 DSSILASGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSSIDIAEH--LIVTGSTDGTLRT 166
Query: 184 WDASTGHCMKTLIDDE-NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+D G TL D + P++ VK S + F L+ +L++++ L + TGKILK+Y G
Sbjct: 167 YDIRKG----TLSSDYFSHPITSVKTSKSASFSLISSLNSSIHLLDQETGKILKSYIGLK 222
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS-VASHPTEN- 300
N +Y + S+F+ + + SGSED VYLW+L++ + P+++ ++ HPT +
Sbjct: 223 NMEYRVRSSFNQSE-TIVFSGSEDGKVYLWDLENETQITSTSVVGTPIVTDISCHPTMDD 281
Query: 301 -IIAS 304
IIA+
Sbjct: 282 FIIAT 286
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 61/254 (24%), Positives = 128/254 (50%)
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
++ ++ + ++ +++++A +++ +RLW+V + C+ GH + + ++ S S
Sbjct: 14 KEPINVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFAS 73
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA-STGHC 191
D+ +++WDV TGK + L H + + +N D +++ + S+D R+WD S
Sbjct: 74 CGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFS 133
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH--TNSKYCIS 249
++ D VS + + + I+ G+ D TLR ++ G + Y H T+ K S
Sbjct: 134 PIQVLADAKDSVSSIDIAEH--LIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKTSKS 191
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS--HPTENIIASGAL 307
++FS ++S S +S ++L + ++ K+++ G + V S + +E I+ SG+
Sbjct: 192 ASFS------LIS-SLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGS- 243
Query: 308 DNDRTVKIWTQEKE 321
D V +W E E
Sbjct: 244 -EDGKVYLWDLENE 256
Score = 130 (50.8 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 44/214 (20%), Positives = 87/214 (40%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GHL I++++++ D +LAS S D +Q + VS
Sbjct: 94 LGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSP------IQVLADAKDSVSS 147
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ + +V+ S D T+R +D+ T H + V + ++ + + + +
Sbjct: 148 IDIAE--HLIVTGSTDGTLRTYDIRKGTLSSDYFSHP--ITSVKTSKSASFSLISSLNSS 203
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAV--DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
+ + D +TGK LK + V FN+ T++ + S DG +WD + +
Sbjct: 204 IHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENETQITSTS 263
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
P V+ + P ++ T+ L ++ Y+
Sbjct: 264 VVGTPIVTDISCHPTMDDFIIATVHGDLFIYQYN 297
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 85/286 (29%), Positives = 137/286 (47%)
Query: 9 SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK 68
+ +P + GH A++ V+FS LLASSS DK
Sbjct: 46 NMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVL-------- 97
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F H V + FS+D + L++ASDD++I+LW V + TL H N+V C F+P
Sbjct: 98 FRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQ 157
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
++VS + D TV++WD + + + + VDF+ T I T+S D R+WD T
Sbjct: 158 LMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRT 217
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
H + + V+ + F P+G +L + D+TL++ + G++L T GH S C+
Sbjct: 218 -HTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCV 276
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWE-----LQSRKVVQKLEGHTDP 289
S FS + ++ +GS D V +W + +V+Q+ H P
Sbjct: 277 S--FSRSGDQFASAGS-DQQVMVWRTNFDSVDYSRVLQQKRDHRTP 319
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 86/304 (28%), Positives = 149/304 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + GH AI+S+ FS G+ +AS S D +FTGH+
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAY--------RFTGHK 60
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVS 132
V+ + FS + L S+S DKT+RLW VP+ L HT V V F+ +++
Sbjct: 61 DAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLT 119
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D+++++W V K + L H++ V F+ DG ++V+ S D ++WDAS+ +
Sbjct: 120 ASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLI 179
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
T + S+V F P+ I + DNT+R+W+ T +L+ Y H+ + +S F
Sbjct: 180 HTFCEPGGYS-SYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALS--F 236
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
+G ++++ S DS + + +L +++ L GH V+ + + AS +D+
Sbjct: 237 H-PSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAG--SDQQ 293
Query: 313 VKIW 316
V +W
Sbjct: 294 VMVW 297
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 345 (126.5 bits), Expect = 8.9e-31, P = 8.9e-31
Identities = 93/315 (29%), Positives = 151/315 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L TL H + VKFS++G+ LA+ +
Sbjct: 306 LVHTLE-HPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEES---PDPSRDL 361
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V + FS D ++LV+ ++D+ I+LWD+ T GH ++ ++F+ IVSG+
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T R+WDV+TG+C+ L + VTA+ + + I S D + R+W S G ++
Sbjct: 422 GDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVER 479
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY----STGK-------ILK-TYTGHT 242
L + V + FSP+ +L G+LD T+++W S G I K TYTGHT
Sbjct: 480 L-EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHT 538
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENII 302
+ + +S S + ++ +SGS+D + W+LQ+ + +GH + VISV P
Sbjct: 539 D--FVLSVAVS-PDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQF 595
Query: 303 ASGALDNDRTVKIWT 317
ASG+ D +IW+
Sbjct: 596 ASGS--GDLRARIWS 608
Score = 286 (105.7 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 75/261 (28%), Positives = 124/261 (47%)
Query: 26 ISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVFSSDS 85
+ ++ FS DG+ L + + D+ F+GHEQ + L FS +
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYV--------FSGHEQDIYSLDFSHNG 414
Query: 86 RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145
RF+VS S D+T RLWDV T C+ L N V + +P I G+ D+ +R+W V
Sbjct: 415 RFIVSGSGDRTARLWDVETGQCILKL-EIENGVTAIAISPNDQFIAVGSLDQIIRVWSV- 472
Query: 146 TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST------------GHCMK 193
+G ++ L H + V ++ F+ D +++++ S D ++W+ G C
Sbjct: 473 SGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKA 532
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
T + +S V SP+ ++ L G+ D +++ W+ TG+ T GH NS IS FS
Sbjct: 533 TYTGHTDFVLS-VAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNS--VISVCFS 589
Query: 254 VTNGKYIVSGSEDSCVYLWEL 274
+G+ SGS D +W +
Sbjct: 590 -PDGRQFASGSGDLRARIWSI 609
Score = 177 (67.4 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 43/135 (31%), Positives = 61/135 (45%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXX--XLQK--F 69
TL + L GH ++ S+ FS D +L S S DK + K +
Sbjct: 475 TLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATY 534
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V + S DSR+ +S S D++++ WD+ T T GH N V V F+P
Sbjct: 535 TGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQ 594
Query: 130 IVSGAFDETVRIWDV 144
SG+ D RIW +
Sbjct: 595 FASGSGDLRARIWSI 609
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 344 (126.2 bits), Expect = 9.5e-31, P = 9.5e-31
Identities = 90/309 (29%), Positives = 149/309 (48%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P Q L H + ++FSH+G+ LASSS D+ G
Sbjct: 263 PSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHT-----LVG 317
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMI 130
H + V +++S D R +++ ++ IR WDV + C+ G + + C + P I
Sbjct: 318 HHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISC-GWYPDGQGI 376
Query: 131 VSGAFDETVRIWDV--KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
++G D ++ +WD+ + +C K + V+ + DG +V+ D + ++D
Sbjct: 377 IAGMTDRSICMWDLDGREKECWK--GQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREA 434
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG-KILKTYTGHTNSKYC 247
++ LI++E+ SF S + K+ILV L+ +RLWN KI+ Y GH S++
Sbjct: 435 --TVERLIEEEDMITSF-SLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFI 491
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
I S F +I SGSEDS VY+W + K++ +L GH V V+ PT + + A
Sbjct: 492 IRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASAS 551
Query: 308 DNDRTVKIW 316
D D T++IW
Sbjct: 552 D-DGTIRIW 559
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 46/210 (21%), Positives = 90/210 (42%)
Query: 84 DSRFLVSASDDKTIRLWDVP--TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
D + +++ D++I +WD+ C K T V + +VS D + +
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGREKECWKGQ--RTQKVSDIAMTDDGKWLVSVCKDSVISL 429
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENP 201
+D + ++ L D +T+ + D I+ + + R+W+ + +
Sbjct: 430 FDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKR 487
Query: 202 PVSFVKFSPNG---KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258
++ G FI G+ D+ + +W+ STGK++ GH + C+S +S TN
Sbjct: 488 SRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVS--WSPTNLH 545
Query: 259 YIVSGSEDSCVYLWEL-------QSRKVVQ 281
+ S S+D + +W L Q +K+VQ
Sbjct: 546 MLASASDDGTIRIWGLDRINQQNQKKKLVQ 575
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 347 (127.2 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 76/236 (32%), Positives = 129/236 (54%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
++D + SDD R+ D T++ K L GH+ V+ V+F+P N ++S + D T+R+
Sbjct: 466 AADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRL 525
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN- 200
W ++T CL H+ PV F+ G V+ +D + R+W +T H I +
Sbjct: 526 WSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHL 583
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V+ +F PN ++ G+ D T+RLW+ G ++ +TGH + ++ FS NGK++
Sbjct: 584 ADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLA--FS-PNGKFL 640
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D V LW++ ++ +L+GHT + ++ IIASG++DN TV++W
Sbjct: 641 ASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDN--TVRLW 694
Score = 340 (124.7 bits), Expect = 6.1e-30, P = 6.1e-30
Identities = 75/226 (33%), Positives = 114/226 (50%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V + FS D +L+S+S+D TIRLW + T TCL GH V+ F+P
Sbjct: 497 GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYF 556
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VSG D R+W + L++ H VT F+ + + T S D R+WD G+
Sbjct: 557 VSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGN 616
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C++ + P+ + FSPNGKF+ G+ D + LW+ G ++ GHT + Y +
Sbjct: 617 CVR-IFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALK- 674
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296
FS +G+ I SGS D+ V LW++ + + +E TD + H
Sbjct: 675 -FS-RDGEIIASGSIDNTVRLWDVM--RAIDDVE--TDDFTAATGH 714
Score = 296 (109.3 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 67/213 (31%), Positives = 100/213 (46%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQG 75
++ L+GH + V FS D L SSS D L + GH
Sbjct: 492 SKILHGHSGPVYGVSFSPDRNYLLSSSED--------GTIRLWSLQTFTCLVGYKGHNYP 543
Query: 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF 135
V D FS + VS D+ RLW L+ GH V C F+P SN + +G+
Sbjct: 544 VWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSS 603
Query: 136 DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
D TVR+WDV G C+++ H P+ ++ F+ +G + + S DG +WD G M
Sbjct: 604 DRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHG-LMIAE 662
Query: 196 IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ + +KFS +G+ I G++DNT+RLW+
Sbjct: 663 LKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 273 (101.2 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 74/240 (30%), Positives = 107/240 (44%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F QG++ + F+ DS + D T+R+W V K V N
Sbjct: 422 FLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRK-----------VKSAADLN 470
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+I + D RI D KT K+L HS PV V F+ D +++SS DG R+W T
Sbjct: 471 LIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQT 530
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C+ N PV +FSP G + + G D RLW + L+ + GH C
Sbjct: 531 FTCLVGY-KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTC- 588
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ F N Y+ +GS D V LW++ + V+ GH P+ S+A P +ASG+ D
Sbjct: 589 -TRFH-PNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTD 646
Score = 223 (83.6 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 68/215 (31%), Positives = 94/215 (43%)
Query: 95 KTIRLW-DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153
K IRL + + C T + + V+F S++I G D TVR+W V K KV
Sbjct: 405 KRIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVK 464
Query: 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK 213
+A D N +I S D L RI D T K ++ + PV V FSP+
Sbjct: 465 -------SAADLN----LIDKESDDVLERIMDEKTSSESK-ILHGHSGPVYGVSFSPDRN 512
Query: 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
++L + D T+RLW+ T L Y GH Y + T G Y VSG D LW
Sbjct: 513 YLLSSSEDGTIRLWSLQTFTCLVGYKGHN---YPVWDTQFSPFGYYFVSGGHDRVARLWA 569
Query: 274 LQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ ++ GH V HP N +A+G+ D
Sbjct: 570 TDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSD 604
Score = 173 (66.0 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 21 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV 80
GHL ++ +F + +A+ S+D+ ++ FTGH+ + L
Sbjct: 581 GHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNC--------VRIFTGHKGPIHSLA 632
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140
FS + +FL S S D + LWD+ + L GHT ++ + F+ +I SG+ D TVR
Sbjct: 633 FSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVR 692
Query: 141 IWDV 144
+WDV
Sbjct: 693 LWDV 696
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 338 (124.0 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 88/320 (27%), Positives = 151/320 (47%)
Query: 5 QSLESFRPYTLTQTLN-GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXX 63
Q +E P LT T+ G +FS DG+ LASSS D
Sbjct: 194 QDVEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQY 253
Query: 64 XXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
+ F H+ V + FS DS L S S D I++W + T C++ H+ V ++F
Sbjct: 254 QADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSF 313
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + ++S +FD+T RI +K+GK LK H+ V F DG+ I+T+S D ++
Sbjct: 314 SRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKV 373
Query: 184 WDASTGHCMKTL-----IDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKT 237
WD+ T C++T + + V+ + P N + I+V +++ + G+++K+
Sbjct: 374 WDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQ-GQVVKS 432
Query: 238 YT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296
++ G+ +++ S T G +I ED +Y + QS + + H VI + H
Sbjct: 433 FSSGNREGGDFVAACVS-TKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHH 491
Query: 297 PTENIIASGALDNDRTVKIW 316
P N++A+ D T+K+W
Sbjct: 492 PHRNLLAT--YSEDCTMKLW 509
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 78/266 (29%), Positives = 131/266 (49%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
L +F+P+ GH ++SV+FS G LLAS+S D+
Sbjct: 44 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK--------F 95
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+F H V + FS+D +FL +AS+DK+I++W + L +L HT++V C F+P
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD 155
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+IVS + D+T++IWD +C+ VDFN GT I ++ D ++WD
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV 215
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
++ + V+ + F P+ +++ + D TL++ + G+++ T GHT +
Sbjct: 216 RVNKLLQHY-QVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVF 274
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLW 272
+S FS G+ SG D+ V LW
Sbjct: 275 TVS--FS-KGGELFASGGADTQVLLW 297
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 84/302 (27%), Positives = 142/302 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L + GH AI+S+ S +G+ LA++S D ++ GH+
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAY--------RYVGHKD 61
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V+ + FS L SAS D+T+RLW HT V V+F+ + + +
Sbjct: 62 VVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATAS 121
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D+++++W + + L L H+ V F+ DG +IV+ S D +IWD + C+
Sbjct: 122 EDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254
D +FV F+P+G I D T+++W+ K+L+ Y H+ CIS F
Sbjct: 182 FSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS--FHP 238
Query: 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314
++ Y+V+ S D + + +L +++ L+GHT PV +V+ + ASG D V
Sbjct: 239 SDN-YLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQ--VL 295
Query: 315 IW 316
+W
Sbjct: 296 LW 297
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
++ + SPNGK + + D L LWN+ Y GH K ++S +G + S
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGH---KDVVTSVQFSPHGNLLAS 77
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
S D V LW R + + HT PV SV +A+ + D+++K+W+ ++
Sbjct: 78 ASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATAS--EDKSIKVWSMYRQ 134
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 234 ILKTY-TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292
+L+ Y GH K I+S NGK + + S D+ + LW + + GH D V S
Sbjct: 9 VLERYFKGH---KAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 293 VASHPTENIIASGALDNDRTVKIWTQEK 320
V P N++AS + DRTV++W +K
Sbjct: 66 VQFSPHGNLLASAS--RDRTVRLWIPDK 91
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/273 (29%), Positives = 136/273 (49%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
L S +P+ GH ++S++FS G LLAS+S DK
Sbjct: 44 LWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSS------- 96
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+F H V + FS+D +FLV+AS+DK+I++W + L +L HT++V C F+P
Sbjct: 97 -EFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD 155
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+IVS + D+T++IWD + +C+ VDF+ +GT I ++ D RIWD
Sbjct: 156 GRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDI 215
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
++ + V+ + F P+G ++ + D T+++ + G+++ T GHT +
Sbjct: 216 RMNRLLQHY-QVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVF 274
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV 279
+S FS +G+ SG D+ V +W +V
Sbjct: 275 TVS--FS-KDGELFTSGGADAQVLVWRTSFNQV 304
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 86/302 (28%), Positives = 142/302 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L + GH AI+S FS + + +A++S D ++ GH+
Sbjct: 10 LERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAY--------RYVGHKD 61
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V+ L FS L SAS DKT+RLW + HT V V+F+ +V+ +
Sbjct: 62 VVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTAS 121
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D+++++W + + L L H+ V F+ DG +IV+ S D +IWD ++ C+
Sbjct: 122 EDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNN 181
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254
D +FV FSPNG I D+ +R+W+ ++L+ Y H+ C+S F
Sbjct: 182 FSDSVGF-ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLS--FH- 237
Query: 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314
+G +V+ S D V + +L +++ L+GHT PV +V+ + SG D V
Sbjct: 238 PSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQ--VL 295
Query: 315 IW 316
+W
Sbjct: 296 VW 297
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 33/119 (27%), Positives = 52/119 (43%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
++ FSPN K I + D L LW+ Y GH + S FS G + S
Sbjct: 21 ITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKD--VVTSLQFS-PQGNLLAS 77
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
S D V LW L + + + HT PV SV + + + D+++K+W+ ++
Sbjct: 78 ASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTAS--EDKSIKVWSMYRQ 134
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 92/310 (29%), Positives = 152/310 (49%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P +TL+ A+ +V+F+ DG + +DK L+ ++G
Sbjct: 14 PQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--------LRTYSG 65
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H V D S D+ L S DKT+ LWDV T ++ GH V V FN ++ +I+
Sbjct: 66 HGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVIL 125
Query: 132 SGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
SG+ D +VR WD ++ K ++ L D +++V + D I+ S DG R +D G
Sbjct: 126 SGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVS-DHE-ILAGSVDGRVRRYDLRMG 183
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ P++ FS +G+ L+ +LD+TLRL + TG++L Y GH N +Y +
Sbjct: 184 QVSSDYVGS---PITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLD 240
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
S + ++VS SED V+ W+L + L ++ V S+A HPTE + + A+
Sbjct: 241 CCLSERD-THVVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPTEPCLLT-AMGG 298
Query: 310 DRTVKIWTQE 319
+++ W +E
Sbjct: 299 --SIQYWREE 306
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 88/305 (28%), Positives = 143/305 (46%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQG 75
T L GH I + +FS DG LAS+ D+ GH+
Sbjct: 29 TMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAV-------LKGHKGA 81
Query: 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS-NMIVSGA 134
+ ++ F++DS LVSA DKT+R+WD+ T +C++ HT+ V V+ N + MI S +
Sbjct: 82 IMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSAS 141
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D TV + D+++ + K TAV FN ++ D ++WD ++
Sbjct: 142 DDGTVMVHDMRSKEAAKKFICKYQQ-TAVTFNDAADNVICGGIDNQIKVWDMLRND-VRY 199
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS----TGKILKTYTG--HTNSKYCI 248
++ ++ + S NG F+L ++D +L W+ +++ Y G H K +
Sbjct: 200 VLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLL 259
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S + YI +GS D VY+W +SR V KL GH V A HPT+ I+ S
Sbjct: 260 KCGWSPRDN-YITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAG-- 316
Query: 309 NDRTV 313
+D+T+
Sbjct: 317 SDKTI 321
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 78/258 (30%), Positives = 131/258 (50%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC--LKTLIGHTNYVFCVNFNPQSN 128
GH + FSSD FL SA D+ I LW+V C L GH + V FN S+
Sbjct: 34 GHGGEIYTSQFSSDGSFLASAGYDQQIFLWNV-FGECENFAVLKGHKGAIMEVKFNADSS 92
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDAS 187
+VS D+TVR+WD++TG C++ +H+D V +VD NR G MI ++S DG + D
Sbjct: 93 HLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMR 152
Query: 188 TGHCMKTLIDD-ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
+ K I + V+F + N ++ G +DN +++W+ + +GH ++
Sbjct: 153 SKEAAKKFICKYQQTAVTFNDAADN---VICGGIDNQIKVWDMLRNDVRYVLSGHRDT-- 207
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQ----SRKVVQKLEG--HT--DPVISVASHPT 298
I+S NG +++S S D + W+++ ++++V + +G H ++ P
Sbjct: 208 -ITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPR 266
Query: 299 ENIIASGALDNDRTVKIW 316
+N I +G+ D R V +W
Sbjct: 267 DNYITAGSAD--RFVYVW 282
>TAIR|locus:2040731 [details] [associations]
symbol:AT2G37670 "AT2G37670" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AC004684 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 IPI:IPI00535445 PIR:T02533 RefSeq:NP_181303.1
UniGene:At.50121 ProteinModelPortal:O80935 SMR:O80935
EnsemblPlants:AT2G37670.1 GeneID:818344 KEGG:ath:AT2G37670
TAIR:At2g37670 HOGENOM:HOG000239143 InParanoid:O80935 OMA:GWIKVRQ
PhylomeDB:O80935 ProtClustDB:CLSN2683085 ArrayExpress:O80935
Genevestigator:O80935 Uniprot:O80935
Length = 903
Score = 307 (113.1 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 76/213 (35%), Positives = 120/213 (56%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-QSNM 129
GH + DL +S S+ L+S+S DKT+RLWD+ T TCLK L H +YV C+ F+P N
Sbjct: 504 GHLDAILDLSWSK-SQLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVDENY 561
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+SG+ D +RIW ++ ++ H + VTA + DG + S+ G+CR +D
Sbjct: 562 FLSGSLDAKIRIWSIQDRHVVEWSDLH-EMVTAACYTPDGQGALIGSHKGICRAYDTEDC 620
Query: 190 HCMKT-LIDDENPPVSFVK-------FSP-NGKFILVGTLDNTLRLWNYSTGKILKTYTG 240
+T ID ++ S K FSP N +LV + D+ +R+ + S +++ + G
Sbjct: 621 KLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSADSRIRILDGS--EVIHKFKG 678
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
N+ +S+++S +GKYI+ SEDS VYLW+
Sbjct: 679 FRNTCSQLSASYS-QDGKYIICASEDSQVYLWK 710
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/189 (22%), Positives = 81/189 (42%)
Query: 114 HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPV--TAVDFNRDGTM 171
H V+ + F+ ++ + SG D + +W+V+ + + + P+ + D + +
Sbjct: 403 HEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGNEIT 462
Query: 172 IVTSSYDGLCRIWDASTG-----HCMKTLIDDENPPVSFVK--------FS-PNGKFILV 217
+V G H +T+ + PV +K S + +L
Sbjct: 463 VVEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSKSQLLLS 522
Query: 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR 277
++D T+RLW+ T LK + H + CI FS + Y +SGS D+ + +W +Q R
Sbjct: 523 SSMDKTVRLWDIETKTCLKLFA-HNDYVTCIQ--FSPVDENYFLSGSLDAKIRIWSIQDR 579
Query: 278 KVVQKLEGH 286
VV+ + H
Sbjct: 580 HVVEWSDLH 588
Score = 62 (26.9 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADK 45
+ Q + H A+ ++KFS D LAS AD+
Sbjct: 396 MCQEIQAHEGAVWTIKFSQDAHYLASGGADR 426
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 85/297 (28%), Positives = 140/297 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH + KF +G LAS+ D+ GH V +
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT-------LKGHSGAVME 114
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L +++D L SAS DKT+ +WD T +K L GHT++V C ++ +G+ D
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 174
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD++ ++ ++ V AV FN I++ D ++WD T+
Sbjct: 175 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTG--HTNSKYCISST 251
+ V+ + S G ++L +DNT+R+W+ + +K + G H K + +
Sbjct: 234 HADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCS 292
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S +G I +GS D VY+W+ SR+++ KL GH + VA HP E II S + D
Sbjct: 293 WS-PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 71/266 (26%), Positives = 128/266 (48%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH A+ + ++ DG +L S+S DK +++ GH V+
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER--------VKRLKGHTSFVN 155
Query: 78 DLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ LV + SDD T++LWD+ ++T +T V V FN S+ I+SG D
Sbjct: 156 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 214
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCM 192
+++WD++ K + H+D VT + + +G+ +++++ D R+WD A C+
Sbjct: 215 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 193 KTLIDD-ENPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
K + N + ++ +SP+G I G+ D + +W+ ++ +IL GH S I+
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS---IN 331
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQ 275
+ I+S S D +Y+ E+Q
Sbjct: 332 EVAFHPDEPIIISASSDKRLYMGEIQ 357
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRD 168
L GH V+C F+P + + S FD + +W+V G C L HS V + +N D
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 120
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
G+M+ ++S D +WD+ TG +K L + S + + G+ D T++LW+
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
++T+ N+ ++ TF+ T+ + I+SG D+ + +W+L+ K+ + GH D
Sbjct: 181 IRKKAAIQTFQ---NTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 236
Query: 289 PVISVASHPTENIIASGALDNDRTVKIW 316
V ++ + + S A+DN TV++W
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDN--TVRVW 262
Score = 194 (73.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 43/169 (25%), Positives = 88/169 (52%)
Query: 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKF 208
+ +L H V F+ +G+ + ++ +D L +W+ G C + + V + +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDS 267
+ +G + + D T+ +W+ TG+ +K GHT+ ++S + G +V +GS+D
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDG 174
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
V LW+++ + +Q + +T V++V + T + I SG +DND +K+W
Sbjct: 175 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDND--IKVW 220
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFS 253
L+ V KF PNG + D + LWN Y T GH+ + +
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA---VMELHY 117
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRT 312
T+G + S S D V +W+ ++ + V++L+GHT V S + ++ +G+ +D T
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS--DDGT 175
Query: 313 VKIWTQEKE 321
VK+W K+
Sbjct: 176 VKLWDIRKK 184
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 85/297 (28%), Positives = 140/297 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH + KF +G LAS+ D+ GH V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT-------LKGHSGAVME 115
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L +++D L SAS DKT+ +WD T +K L GHT++V C ++ +G+ D
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD++ ++ ++ V AV FN I++ D ++WD T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTG--HTNSKYCISST 251
+ V+ + S G ++L +DNT+R+W+ + +K + G H K + +
Sbjct: 235 HADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCS 293
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S +G I +GS D VY+W+ SR+++ KL GH + VA HP E II S + D
Sbjct: 294 WS-PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 71/266 (26%), Positives = 128/266 (48%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH A+ + ++ DG +L S+S DK +++ GH V+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER--------VKRLKGHTSFVN 156
Query: 78 DLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ LV + SDD T++LWD+ ++T +T V V FN S+ I+SG D
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 215
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCM 192
+++WD++ K + H+D VT + + +G+ +++++ D R+WD A C+
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 193 KTLIDD-ENPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
K + N + ++ +SP+G I G+ D + +W+ ++ +IL GH S I+
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS---IN 332
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQ 275
+ I+S S D +Y+ E+Q
Sbjct: 333 EVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRD 168
L GH V+C F+P + + S FD + +W+V G C L HS V + +N D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 121
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
G+M+ ++S D +WD+ TG +K L + S + + G+ D T++LW+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
++T+ N+ ++ TF+ T+ + I+SG D+ + +W+L+ K+ + GH D
Sbjct: 182 IRKKAAIQTFQ---NTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 289 PVISVASHPTENIIASGALDNDRTVKIW 316
V ++ + + S A+DN TV++W
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDN--TVRVW 263
Score = 194 (73.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 43/169 (25%), Positives = 88/169 (52%)
Query: 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKF 208
+ +L H V F+ +G+ + ++ +D L +W+ G C + + V + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDS 267
+ +G + + D T+ +W+ TG+ +K GHT+ ++S + G +V +GS+D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDG 175
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
V LW+++ + +Q + +T V++V + T + I SG +DND +K+W
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDND--IKVW 221
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFS 253
L+ V KF PNG + D + LWN Y T GH+ + +
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA---VMELHY 118
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRT 312
T+G + S S D V +W+ ++ + V++L+GHT V S + ++ +G+ +D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS--DDGT 176
Query: 313 VKIWTQEKE 321
VK+W K+
Sbjct: 177 VKLWDIRKK 185
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 85/297 (28%), Positives = 140/297 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH + KF +G LAS+ D+ GH V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT-------LKGHSGAVME 115
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L +++D L SAS DKT+ +WD T +K L GHT++V C ++ +G+ D
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD++ ++ ++ V AV FN I++ D ++WD T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTG--HTNSKYCISST 251
+ V+ + S G ++L +DNT+R+W+ + +K + G H K + +
Sbjct: 235 HADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCS 293
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S +G I +GS D VY+W+ SR+++ KL GH + VA HP E II S + D
Sbjct: 294 WS-PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 71/266 (26%), Positives = 128/266 (48%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH A+ + ++ DG +L S+S DK +++ GH V+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER--------VKRLKGHTSFVN 156
Query: 78 DLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ LV + SDD T++LWD+ ++T +T V V FN S+ I+SG D
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 215
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCM 192
+++WD++ K + H+D VT + + +G+ +++++ D R+WD A C+
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 193 KTLIDD-ENPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
K + N + ++ +SP+G I G+ D + +W+ ++ +IL GH S I+
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS---IN 332
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQ 275
+ I+S S D +Y+ E+Q
Sbjct: 333 EVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRD 168
L GH V+C F+P + + S FD + +W+V G C L HS V + +N D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 121
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
G+M+ ++S D +WD+ TG +K L + S + + G+ D T++LW+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
++T+ N+ ++ TF+ T+ + I+SG D+ + +W+L+ K+ + GH D
Sbjct: 182 IRKKAAIQTFQ---NTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 289 PVISVASHPTENIIASGALDNDRTVKIW 316
V ++ + + S A+DN TV++W
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDN--TVRVW 263
Score = 194 (73.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 43/169 (25%), Positives = 88/169 (52%)
Query: 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKF 208
+ +L H V F+ +G+ + ++ +D L +W+ G C + + V + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDS 267
+ +G + + D T+ +W+ TG+ +K GHT+ ++S + G +V +GS+D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDG 175
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
V LW+++ + +Q + +T V++V + T + I SG +DND +K+W
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDND--IKVW 221
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFS 253
L+ V KF PNG + D + LWN Y T GH+ + +
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA---VMELHY 118
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRT 312
T+G + S S D V +W+ ++ + V++L+GHT V S + ++ +G+ +D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS--DDGT 176
Query: 313 VKIWTQEKE 321
VK+W K+
Sbjct: 177 VKLWDIRKK 185
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 86/297 (28%), Positives = 140/297 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH + KF +G LAS+ D+ GH V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT-------LKGHSGAVME 115
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L +++D L SAS DKT+ +WD T +K L GHT++V C ++ +G+ D
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD++ ++ ++ V AV FN I++ D ++WD T+
Sbjct: 176 TVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTG--HTNSKYCISST 251
+ V+ + S G ++L +DNT+R+W+ + +K + G H K + +
Sbjct: 235 HADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCS 293
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S +G I +GS D VY+W+ SR+V+ KL GH + VA HP E II S + D
Sbjct: 294 WS-PDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 70/266 (26%), Positives = 128/266 (48%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH A+ + ++ DG +L S+S DK +++ GH V+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER--------VKRLKGHTSFVN 156
Query: 78 DLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ LV + SDD T++LWD+ ++T +T V V FN S+ I+SG D
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGID 215
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCM 192
+++WD++ K + H+D VT + + +G+ +++++ D R+WD A C+
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 193 KTLIDD-ENPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
K + N + ++ +SP+G I G+ D + +W+ ++ ++L GH S I+
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGS---IN 332
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQ 275
+ I+S S D +Y+ E+Q
Sbjct: 333 EVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRD 168
L GH V+C F+P + + S FD + +W+V G C L HS V + +N D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 121
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
G+M+ ++S D +WD+ TG +K L + S + + G+ D T++LW+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
++T+ N+ ++ TF+ T+ + I+SG D+ + +W+L+ K+ + GH D
Sbjct: 182 IRKKAAVQTFQ---NTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 289 PVISVASHPTENIIASGALDNDRTVKIW 316
V ++ + + S A+DN TV++W
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDN--TVRVW 263
Score = 195 (73.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 44/169 (26%), Positives = 88/169 (52%)
Query: 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKF 208
+ +L H V F+ +G+ + ++ +D L +W+ G C + + V + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDS 267
+ +G + + D T+ +W+ TG+ +K GHT+ ++S + G +V +GS+D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDG 175
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
V LW+++ + VQ + +T V++V + T + I SG +DND +K+W
Sbjct: 176 TVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDND--IKVW 221
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFS 253
L+ V KF PNG + D + LWN Y T GH+ + +
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA---VMELHY 118
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRT 312
T+G + S S D V +W+ ++ + V++L+GHT V S + ++ +G+ +D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS--DDGT 176
Query: 313 VKIWTQEKE 321
VK+W K+
Sbjct: 177 VKLWDIRKK 185
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 84/294 (28%), Positives = 139/294 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH + KF +G LAS+ D+ GH V +
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT-------LKGHSGAVME 114
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L +++D L SAS DKT+ +WD T +K L GHT++V C ++ +G+ D
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 174
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD++ ++ ++ V AV FN I++ D ++WD T+
Sbjct: 175 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTG--HTNSKYCISST 251
+ V+ + S G ++L +DNT+R+W+ + +K + G H K + +
Sbjct: 234 HADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCS 292
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305
+S +G I +GS D VY+W+ SR+++ KL GH + VA HP E II +G
Sbjct: 293 WS-PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
Score = 266 (98.7 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRD 168
L GH V+C F+P + + S FD + +W+V G C L HS V + +N D
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 120
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
G+M+ ++S D +WD+ TG +K L + S + + G+ D T++LW+
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
++T+ N+ ++ TF+ T+ + I+SG D+ + +W+L+ K+ + GH D
Sbjct: 181 IRKKAAIQTFQ---NTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 236
Query: 289 PVISVASHPTENIIASGALDNDRTVKIW 316
V ++ + + S A+DN TV++W
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDN--TVRVW 262
Score = 259 (96.2 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 63/235 (26%), Positives = 114/235 (48%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH A+ + ++ DG +L S+S DK +++ GH V+
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER--------VKRLKGHTSFVN 155
Query: 78 DLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ LV + SDD T++LWD+ ++T +T V V FN S+ I+SG D
Sbjct: 156 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 214
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCM 192
+++WD++ K + H+D VT + + +G+ +++++ D R+WD A C+
Sbjct: 215 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 193 KTLIDD-ENPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
K + N + ++ +SP+G I G+ D + +W+ ++ +IL GH S
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 329
Score = 194 (73.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 43/169 (25%), Positives = 88/169 (52%)
Query: 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKF 208
+ +L H V F+ +G+ + ++ +D L +W+ G C + + V + +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDS 267
+ +G + + D T+ +W+ TG+ +K GHT+ ++S + G +V +GS+D
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDG 174
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
V LW+++ + +Q + +T V++V + T + I SG +DND +K+W
Sbjct: 175 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDND--IKVW 220
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFS 253
L+ V KF PNG + D + LWN Y T GH+ + +
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA---VMELHY 117
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRT 312
T+G + S S D V +W+ ++ + V++L+GHT V S + ++ +G+ +D T
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS--DDGT 175
Query: 313 VKIWTQEKE 321
VK+W K+
Sbjct: 176 VKLWDIRKK 184
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 93/310 (30%), Positives = 151/310 (48%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P +TL+ A+ +V+F+ DG + +DK L+ ++G
Sbjct: 14 PQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--------LRTYSG 65
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H V D S D+ L S DK + LWDV + ++ GH V V FN ++ +I+
Sbjct: 66 HGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVIL 125
Query: 132 SGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
SG+ D +VR WD ++ K ++ L D +++V + D ++ S DG R +D G
Sbjct: 126 SGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVS-DHE-VLAGSVDGRVRRYDLRMG 183
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ P++ FS +G+ LV +LD+TLRL + TG++L YTGH N +Y +
Sbjct: 184 QLFSDYVGS---PITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLD 240
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
S + ++VS SED V+ W+L +V L V S+A HPTE + + A+
Sbjct: 241 CCLSERD-THVVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYHPTEPCLLT-AMGG 298
Query: 310 DRTVKIWTQE 319
+V+ W +E
Sbjct: 299 --SVQCWREE 306
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 84/297 (28%), Positives = 140/297 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH + KF +G LAS+ D+ GH V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT-------LKGHSGAVME 115
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L +++D L SAS DKT+ +WD T +K L GHT++V C ++ +G+ D
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD++ ++ ++ V AV FN I++ D ++WD T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTG--HTNSKYCISST 251
+ V+ + S G ++L +DNT+R+W+ + ++ + G H K + +
Sbjct: 235 HADS-VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCS 293
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S +G I +GS D VY+W+ SR+++ KL GH + VA HP E II S + D
Sbjct: 294 WS-PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 70/266 (26%), Positives = 128/266 (48%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH A+ + ++ DG +L S+S DK +++ GH V+
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER--------VKRLKGHTSFVN 156
Query: 78 DLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ LV + SDD T++LWD+ ++T +T V V FN S+ I+SG D
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGID 215
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCM 192
+++WD++ K + H+D VT + + +G+ +++++ D R+WD A C+
Sbjct: 216 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 193 KTLIDD-ENPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ + N + ++ +SP+G I G+ D + +W+ ++ +IL GH S I+
Sbjct: 276 RIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS---IN 332
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQ 275
+ I+S S D +Y+ E+Q
Sbjct: 333 EVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRD 168
L GH V+C F+P + + S FD + +W+V G C L HS V + +N D
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 121
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
G+M+ ++S D +WD+ TG +K L + S + + G+ D T++LW+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
++T+ N+ ++ TF+ T+ + I+SG D+ + +W+L+ K+ + GH D
Sbjct: 182 IRKKAAIQTFQ---NTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
Query: 289 PVISVASHPTENIIASGALDNDRTVKIW 316
V ++ + + S A+DN TV++W
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDN--TVRVW 263
Score = 194 (73.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 43/169 (25%), Positives = 88/169 (52%)
Query: 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKF 208
+ +L H V F+ +G+ + ++ +D L +W+ G C + + V + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDS 267
+ +G + + D T+ +W+ TG+ +K GHT+ ++S + G +V +GS+D
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDG 175
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
V LW+++ + +Q + +T V++V + T + I SG +DND +K+W
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDND--IKVW 221
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFS 253
L+ V KF PNG + D + LWN Y T GH+ + +
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA---VMELHY 118
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRT 312
T+G + S S D V +W+ ++ + V++L+GHT V S + ++ +G+ +D T
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS--DDGT 176
Query: 313 VKIWTQEKE 321
VK+W K+
Sbjct: 177 VKLWDIRKK 185
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 86/299 (28%), Positives = 143/299 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH + KF +G LASS D+ GH V +
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYAT-------LKGHSGAVME 104
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV---FCVNFNPQSNMIVSGAF 135
L +++D L SAS DKT+ +WD T +K L GHT++V F PQ + +G+
Sbjct: 105 LHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQ--LACTGSD 162
Query: 136 DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
D TV++WD++ + ++ V +V FN I++ D ++WD + ++
Sbjct: 163 DGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSM 221
Query: 196 IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTG--HTNSKYCIS 249
V+ + S +G ++L ++DN++R+W+ + +K + G H K +
Sbjct: 222 -QGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLR 280
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
++S +G I +GS D VY+W+ +R++V KL GH V VA HP E I+ SG+ D
Sbjct: 281 CSWSA-DGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSD 338
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 71/266 (26%), Positives = 125/266 (46%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH A+ + ++ DG LL S+S DK +++ GH V+
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGER--------VKRLKGHTSFVN 145
Query: 78 DLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ L + SDD T++LWD+ + T +T V V FN S+ I+SG D
Sbjct: 146 SCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGID 204
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCM 192
+++WD++ K + + H D VT + + DG+ ++++S D R+WD A C+
Sbjct: 205 NDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCV 264
Query: 193 KTLIDD-ENPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
K + N + ++ +S +G I G+ D + +W+ +T +I+ GH S ++
Sbjct: 265 KIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGS---VN 321
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQ 275
++SGS D +Y+ E+Q
Sbjct: 322 EVAFHPEEPIVLSGSSDKRLYIGEIQ 347
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 64/237 (27%), Positives = 119/237 (50%)
Query: 88 LVSASDDKTIRLWDVPTATCLKT----LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
LV+A+ + + P ++ L+ L GH V+C F+P + S +D + +W+
Sbjct: 25 LVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWN 84
Query: 144 VKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENP 201
V G C L HS V + +N DG+++ ++S D +WD+ TG +K L +
Sbjct: 85 VY-GDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSF 143
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT--NSKYCISSTFSVTNGKY 259
S + G+ D T++LW+ I K + HT N+ +S TF+ T+ +
Sbjct: 144 VNSCFPARRGPQLACTGSDDGTVKLWD-----IRKKASVHTFQNTYQVLSVTFNDTSDQ- 197
Query: 260 IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
I+SG D+ + +W+L+ K++ ++GH D V ++ + + S ++DN +V++W
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDN--SVRVW 252
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 35/129 (27%), Positives = 60/129 (46%)
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFS 253
L+ V KF PNG + D + +WN Y + T GH+ + +
Sbjct: 51 LLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGA---VMELHY 107
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRT 312
T+G + S S D V +W+ ++ + V++L+GHT V S + + +G+ +D T
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGS--DDGT 165
Query: 313 VKIWTQEKE 321
VK+W K+
Sbjct: 166 VKLWDIRKK 174
Score = 113 (44.8 bits), Expect = 0.00067, P = 0.00067
Identities = 31/145 (21%), Positives = 62/145 (42%)
Query: 1 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
+ +D + R L ++ GH +++ + S DG L S+S D
Sbjct: 203 IDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKER 262
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC 120
E+ + +S+D + + S D+ + +WD T + L GH V
Sbjct: 263 CVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNE 322
Query: 121 VNFNPQSNMIVSGAFDETVRIWDVK 145
V F+P+ +++SG+ D+ + I +++
Sbjct: 323 VAFHPEEPIVLSGSSDKRLYIGEIQ 347
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 91/310 (29%), Positives = 151/310 (48%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P +TL+ A+ +V+F+ DG + +DK L+ ++G
Sbjct: 14 PRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--------LRTYSG 65
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H V D S D+ L S DKT+ LWDV T ++ GH V V FN ++ +I+
Sbjct: 66 HGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVIL 125
Query: 132 SGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
SG+ D +VR WD ++ K ++ L D +++V + D I+ S DG R +D G
Sbjct: 126 SGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVS-DHE-ILAGSVDGRVRRYDLRMG 183
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ P++ FS +G+ L+ +LD+TLRL + TG++L Y GH N KY +
Sbjct: 184 QVTSDYVGS---PITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLD 240
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
S + ++VS SED V+ W+L + L ++ V S+A HP + + + A+
Sbjct: 241 CCLSERD-THVVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYHPADPCLLT-AMGG 298
Query: 310 DRTVKIWTQE 319
+++ W +E
Sbjct: 299 --SIQYWREE 306
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 90/310 (29%), Positives = 150/310 (48%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P +TL+ A+ +V+F+ DG + +DK L+ ++G
Sbjct: 14 PQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--------LRTYSG 65
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H V D S D+ L S DK + LWDV + ++ GH V V FN ++ +I+
Sbjct: 66 HGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVIL 125
Query: 132 SGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
SG+ D T+R WD ++ K ++ L D +++V + D ++ S DG R +D G
Sbjct: 126 SGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSVKVS-DHE-VLAGSVDGRVRRYDLRMG 183
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ P++ + FS +G+ LV +LD+TLRL + TG++L YTGH N +Y +
Sbjct: 184 QLFSDYVGS---PITCICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLD 240
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
S + ++VS SED V+ W+L + L V S+ HPTE + + A+
Sbjct: 241 CCLSERD-THVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHPTEPCLLT-AMGG 298
Query: 310 DRTVKIWTQE 319
+++ W +E
Sbjct: 299 --SIQCWREE 306
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 328 (120.5 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 77/235 (32%), Positives = 129/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 270
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V TG+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 271 VNTGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 329 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 381
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 382 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 432
Score = 266 (98.7 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 67/208 (32%), Positives = 109/208 (52%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV T L TLI H V + FN + M
Sbjct: 241 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGM 296
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 297 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 354
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 355 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 411
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWEL 274
CI F + K IVSG+ D + +W+L
Sbjct: 412 CIR--F---DNKRIVSGAYDGKIKVWDL 434
Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 60/181 (33%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 318 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 367
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 368 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 423
Query: 134 AFDETVRIWDV--------KTGK-CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ G CL+ L HS V + F D IV+SS+D IW
Sbjct: 424 AYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 481
Query: 185 D 185
D
Sbjct: 482 D 482
Score = 197 (74.4 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 283 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 338
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 339 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 396
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 397 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLV 453
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWELQSRKVVQ 281
+ V ++ IVS S D + +W+ + Q
Sbjct: 454 EHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 490
Score = 142 (55.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 51/177 (28%), Positives = 83/177 (46%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T +TLNGH R I+ +++ D RL+ S S+D
Sbjct: 344 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGAC-- 399
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--------PTAT-CLKT 110
L+ GHE+ V + F D++ +VS + D I++WD+ P T CL+T
Sbjct: 400 ------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRT 451
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L+ H+ VF + F+ IVS + D+T+ IWD + P S T +R
Sbjct: 452 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYISR 506
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 331 (121.6 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 69/226 (30%), Positives = 115/226 (50%)
Query: 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + LW + C+ +L GHT+ V V N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+IV+G+ ++R+WD++ K L+ L H + ++DF+ G + + S D ++W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ + V ++FSP+GK++ D+T++LW+ + GK++ + GHT
Sbjct: 133 DIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV 290
+ F N + SGS D + W+L+ +VV +EG PV
Sbjct: 192 VNVVE--FH-PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Score = 317 (116.6 bits), Expect = 8.6e-28, P = 8.6e-28
Identities = 67/218 (30%), Positives = 114/218 (52%)
Query: 104 TATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTA 162
TA L+ ++ H + V + S ++ +G D V +W + C+ L H+ PV +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 163 VDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN 222
V N +IV S G R+WD ++TL+ + + + F P G+F+ G+ D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK-ANICSLDFHPYGEFVASGSQDT 127
Query: 223 TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282
++LW+ + Y GH+ + C+ FS +GK++ S ++D V LW+L + K++ +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLR--FS-PDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
GHT PV V HP E ++ASG+ +DRT++ W EK
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGS--SDRTIRFWDLEK 220
Score = 228 (85.3 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 51/188 (27%), Positives = 83/188 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH + SV+ + L+ + S L+ GH+ +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQS--------GSIRVWDLEAAKILRTLMGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWD+ C+ GH+ V C+ F+P + S A D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + P H+ PV V+F+ + ++ + S D R WD + + I+
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV-SCIE 228
Query: 198 DENPPVSF 205
E PV +
Sbjct: 229 GEPGPVRY 236
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 45/146 (30%), Positives = 69/146 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + ++ GH Q
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQD--------TNIKLWDIRRKGCVFRYRGHSQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GHT V V F+P ++ SG+
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPV 160
D T+R WD++ + + + PV
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPV 234
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 328 (120.5 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 78/247 (31%), Positives = 136/247 (55%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D + +VS D TI++WD C+KTL+GHT V C+ ++ + +I+
Sbjct: 209 NSKGVYCLQYD-DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK--VII 264
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH- 190
SG+ D TVR+WDV TG+ + L H + V + FN +G M+VT S D +WD ++
Sbjct: 265 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMTSPSE 322
Query: 191 -CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 323 ITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 380
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ T+ I+ SGA D
Sbjct: 381 Y-----RDRLVVSGSSDNSIRLWDIECGACLRVLEGHEE-LVRCIRFDTKRIV-SGAYDG 433
Query: 310 DRTVKIW 316
+K+W
Sbjct: 434 K--IKVW 438
Score = 251 (93.4 bits), Expect = 9.4e-21, P = 9.4e-21
Identities = 64/207 (30%), Positives = 106/207 (51%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V L D + ++S S D T+R+WDV T + TLI H V + FN + M+
Sbjct: 248 GHTGSV--LCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN--NGMM 303
Query: 131 VSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W S
Sbjct: 304 VTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTS 361
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
T ++TL + ++ +++ + ++ G+ DN++RLW+ G L+ GH C
Sbjct: 362 TCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRC 418
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWEL 274
I F K IVSG+ D + +W+L
Sbjct: 419 IR--FDT---KRIVSGAYDGKIKVWDL 440
Score = 251 (93.4 bits), Expect = 9.4e-21, P = 9.4e-21
Identities = 69/255 (27%), Positives = 126/255 (49%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
SSD ++ + T + TL H A+ ++F++ ++ + S D+
Sbjct: 267 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMTSPSEIT 324
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
+ GH V+ + F D +++VSAS D+TI++W T ++TL GH +
Sbjct: 325 LR-----RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA 377
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
C+ + + ++VSG+ D ++R+WD++ G CL+VL H + V + F D IV+ +YDG
Sbjct: 378 CLQY--RDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDG 433
Query: 180 LCRIWD---------ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-DNTLRLWNY 229
++WD AS C+ TL++ V ++F +F +V + D+T+ +W++
Sbjct: 434 KIKVWDLVAALDPRAASNTLCLNTLVEHTGR-VFRLQFD---EFQIVSSSHDDTILIWDF 489
Query: 230 STGKILKTYTGHTNS 244
+ TG T S
Sbjct: 490 LNFTPNENKTGRTPS 504
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/154 (29%), Positives = 81/154 (52%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
DG IV+ D +IWD + C+KTL+ S + + K I+ G+ D+T+R+W
Sbjct: 220 DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTG---SVLCLQYDDKVIISGSSDSTVRVW 275
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG+++ T H + + F+ NG +V+ S+D + +W++ S + + L
Sbjct: 276 DVNTGEMVNTLIHHCEA--VLHLRFN--NGM-MVTCSKDRSIAVWDMTSPSEITLRRVLV 330
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 331 GHR-AAVNVVDFDEKYIVSASG----DRTIKVWS 359
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 65/187 (34%), Positives = 107/187 (57%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH ++ + F +VSAS+D TI++WD + +TL GHTN V ++F+ N+
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNL 162
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ S + D T+++WD +T C+K L H V+ V F G +++SS D ++W+A+TG
Sbjct: 163 LASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATG 222
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+C+KTL+ E+ V + S +G I + D T++ WN G+ L TY H++ C++
Sbjct: 223 YCIKTLVGHEDW-VRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLA 281
Query: 250 STFSVTN 256
FS N
Sbjct: 282 --FSTAN 286
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 74/246 (30%), Positives = 118/246 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V D+ F L S S D TI+LWD T C+KTL GH + V CV F P + +
Sbjct: 146 GHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQL 205
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+S + D+T+++W+ TG C+K L H D V + + DG+ I + S D + W+ G
Sbjct: 206 ISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGE 265
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ T + + V + FS N + + G +L T G + K
Sbjct: 266 CLATYREHSHV-VECLAFSTA----------NIIDI----PGSLLSTPEGKSKVKQGPGG 310
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
G Y+ +GS D + +WEL + + + GH + V +V HP + S + +D
Sbjct: 311 NLVGQCG-YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLS--VGDD 367
Query: 311 RTVKIW 316
+T+++W
Sbjct: 368 KTIRVW 373
Score = 284 (105.0 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 65/205 (31%), Positives = 96/205 (46%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH I+SVKF L+ S+S D + GH V D
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFE--------RTLKGHTNAVQD 153
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ F L S S D TI+LWD T C+KTL GH + V CV F P + ++S + D+T
Sbjct: 154 IDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKT 213
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
+++W+ TG C+K L H D V + + DG+ I + S D + W+ G C+ T +
Sbjct: 214 IKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREH 273
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNT 223
+ V + FS + G+L +T
Sbjct: 274 SHV-VECLAFSTANIIDIPGSLLST 297
Score = 279 (103.3 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 83/278 (29%), Positives = 134/278 (48%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ Y +TL+GH +S V+F+ G L SSS DK
Sbjct: 167 SADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYC-- 224
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ GHE V + S D + S S+D+TI+ W++ CL T H++ V
Sbjct: 225 ------IKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVE 278
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
C+ F+ + + + G+ T GK KV + + G + T S D
Sbjct: 279 CLAFSTANIIDIPGSLLSTPE------GKS-KVKQGPGGNLVG----QCG-YLATGSRDK 326
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFIL-VGTLDNTLRLWNYSTGKILKTY 238
+IW+ +TG C+ T I +N V V+F P GKF+L VG D T+R+W+ + G+ +KT
Sbjct: 327 TIKIWELATGRCLATYIGHDNW-VRAVRFHPCGKFLLSVGD-DKTIRVWDIAQGRCIKTI 384
Query: 239 T-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275
HT+ C+ F + N +I +G D + +W+LQ
Sbjct: 385 NEAHTHFISCLD--FCLHN-PHIATGGVDDVIKVWKLQ 419
Score = 276 (102.2 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 60/193 (31%), Positives = 105/193 (54%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170
L GH N + V F+P +++VS + D T+++WD ++G+ + L H++ V +DF++ G
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 171 MIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
++ + S D ++WD T C+KTL D N VS V+F+P+G ++ + D T+++W
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHN--VSCVRFTPSGDQLISSSRDKTIKVWEA 219
Query: 230 STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDP 289
+TG +KT GH + + T S +G I S S D + W + + + H+
Sbjct: 220 ATGYCIKTLVGHED--WVRKITVS-EDGSCIASCSNDQTIKTWNIVKGECLATYREHSH- 275
Query: 290 VISVASHPTENII 302
V+ + T NII
Sbjct: 276 VVECLAFSTANII 288
Score = 273 (101.2 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 69/248 (27%), Positives = 127/248 (51%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ VS + F+ L+S+S DKTI++W+ T C+KTL+GH ++V + + + I
Sbjct: 188 GHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCI 247
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S + D+T++ W++ G+CL HS V + F+ + + S + G
Sbjct: 248 ASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGS------LLSTPEG- 300
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
K+ + + P + V G ++ G+ D T+++W +TG+ L TY GH N + +
Sbjct: 301 --KSKVK-QGPGGNLV--GQCG-YLATGSRDKTIKIWELATGRCLATYIGHDN--WVRAV 352
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL-EGHTDPVISVASHPTENI-IASGALD 308
F GK+++S +D + +W++ + ++ + E HT IS N IA+G +D
Sbjct: 353 RFHPC-GKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTH-FISCLDFCLHNPHIATGGVD 410
Query: 309 NDRTVKIW 316
+ +K+W
Sbjct: 411 D--VIKVW 416
Score = 217 (81.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 50/167 (29%), Positives = 82/167 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D +++ F +TL GH A+ + F G LLAS SAD
Sbjct: 125 SEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSAD--------LTIKLWD 176
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ GH+ VS + F+ L+S+S DKTI++W+ T C+KTL+GH ++V
Sbjct: 177 FQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVR 236
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN 166
+ + + I S + D+T++ W++ G+CL HS V + F+
Sbjct: 237 KITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 208 (78.3 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 47/165 (28%), Positives = 83/165 (50%)
Query: 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN 211
+L H + + +V F+ +++V++S D ++WD +G +TL N V + F
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNA-VQDIDFDKT 159
Query: 212 GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
G + + D T++LW++ T +KT GH ++ C+ T S G ++S S D + +
Sbjct: 160 GNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS---GDQLISSSRDKTIKV 216
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
WE + ++ L GH D V + + IAS ND+T+K W
Sbjct: 217 WEAATGYCIKTLVGHEDWVRKITVSEDGSCIAS--CSNDQTIKTW 259
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 91/310 (29%), Positives = 150/310 (48%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P +TL+ A+ +V+F+ DG + +DK L+ ++G
Sbjct: 14 PQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--------LRTYSG 65
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H V D S D+ L S DK + LWDV + ++ GH V V FN ++ +I+
Sbjct: 66 HGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVIL 125
Query: 132 SGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
SG+ D ++R WD ++ + ++ L D +++V + D +++ S DG R +D G
Sbjct: 126 SGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKVS-DHE-VLSGSVDGRVRRYDLRMG 183
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ P++ FS +G+ LV +LD+TLRL + TG++L YTGH N +Y +
Sbjct: 184 QLFSDYVGS---PITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLD 240
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
S + ++VS SED VY W+L + L V S+A HPTE + + A+
Sbjct: 241 CCLSERD-THVVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYHPTEPCLLT-AMGG 298
Query: 310 DRTVKIWTQE 319
+V W +E
Sbjct: 299 --SVHCWREE 306
>TAIR|locus:2090146 [details] [associations]
symbol:AT3G15470 "AT3G15470" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB022218 EMBL:AC024081 HOGENOM:HOG000239143
EMBL:AF372960 EMBL:AY081717 IPI:IPI00541904 RefSeq:NP_566515.1
UniGene:At.11977 UniGene:At.48664 ProteinModelPortal:Q9LDG7
SMR:Q9LDG7 STRING:Q9LDG7 PaxDb:Q9LDG7 PRIDE:Q9LDG7
EnsemblPlants:AT3G15470.1 GeneID:820786 KEGG:ath:AT3G15470
TAIR:At3g15470 InParanoid:Q9LDG7 OMA:GMASTEN PhylomeDB:Q9LDG7
ProtClustDB:CLSN2917135 Genevestigator:Q9LDG7 Uniprot:Q9LDG7
Length = 883
Score = 296 (109.3 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 74/218 (33%), Positives = 121/218 (55%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-QS 127
F GH V DL +S S+ L+S+S DKT+RLW++ + TCLK + H++YV C+ FNP
Sbjct: 509 FQGHVDDVLDLAWSK-SQHLLSSSMDKTVRLWNLSSQTCLK-VFSHSDYVTCIQFNPVDD 566
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+SG+ D VR+W + + + H + VT+ + DG ++ SY G CR++ AS
Sbjct: 567 RYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYSAS 625
Query: 188 TGHCM-KTLIDDENPP-------VSFVKFSPNGKF-ILVGTLDNTLRLWNYSTGKILKTY 238
K+ I+ +N ++ +F P +LV + D+ +R+ + T + K
Sbjct: 626 DNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVD-GTDLVNKL- 683
Query: 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
G N+ IS++ + +GKY+VS SEDS VY+W+ +S
Sbjct: 684 KGFRNTSSQISASITA-DGKYVVSASEDSHVYIWKYES 720
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 48/198 (24%), Positives = 85/198 (42%)
Query: 114 HTNYVFCVNFNPQSNMIVSGAFDETVRIWDV----KTGKCLK------VLPAHSDPV-TA 162
H ++ + F+ + S D + IW V K G+ L +L + P T
Sbjct: 412 HNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPEPTT 471
Query: 163 VDFNRDGTMIVTSSYDGLCRIW--DASTGHCMKTLIDDENPPVSFVKFS-PNGKFILVGT 219
+ R G ++ L I+ D+ G K + + + + +L +
Sbjct: 472 MSPRRRGRTSISRKSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSS 531
Query: 220 LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV 279
+D T+RLWN S+ LK ++ H++ CI F+ + +Y +SGS D+ V +W + R+V
Sbjct: 532 MDKTVRLWNLSSQTCLKVFS-HSDYVTCIQ--FNPVDDRYFISGSLDAKVRVWSIPDRQV 588
Query: 280 VQKLEGHTDPVISVASHP 297
V + H + V S P
Sbjct: 589 VDWYDLH-EMVTSACYTP 605
Score = 66 (28.3 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASSSAD 44
TQ + H +I S+KFS DG+ LAS+ D
Sbjct: 406 TQEIQAHNGSIWSIKFSLDGKYLASAGED 434
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 334 (122.6 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 80/271 (29%), Positives = 136/271 (50%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV-------PTA-----------TCLKT 110
F + +S L FS D R + D I++W + P TC KT
Sbjct: 462 FQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTC-KT 520
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170
L+GH+ V+ +F+P + ++SG+ D+TVR+W + T L H+ PV V F+ G
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
T+S+D R+W + ++ N V V F PNG ++ G+ D T R+W+ S
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLND-VDCVSFHPNGCYVFTGSSDKTCRMWDVS 639
Query: 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV 290
TG ++ + GHT + S +G+++ +GSED + +W++ + K ++++ GH
Sbjct: 640 TGDSVRLFLGHTAP---VISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNA 696
Query: 291 ISVASHPTE-NIIASGALDNDRTVKIWTQEK 320
I S+ E N++ SG D+ TV++W +K
Sbjct: 697 IYSLSYSKEGNVLISGGADH--TVRVWDLKK 725
Score = 301 (111.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 66/212 (31%), Positives = 102/212 (48%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH + S FS D + L S S DK L + GH V
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTA--------LVSYKGHNHPV 570
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
D+ FS + +AS D+T RLW L+ GH N V CV+F+P + +G+ D
Sbjct: 571 WDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSD 630
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
+T R+WDV TG +++ H+ PV ++ DG + T S DG+ +WD TG +K +
Sbjct: 631 KTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMR 690
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ + +S G ++ G D+T+R+W+
Sbjct: 691 GHGKNAIYSLSYSKEGNVLISGGADHTVRVWD 722
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D+++ S +T + GH + V FS G A++S D+
Sbjct: 544 SEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYP-- 601
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L+ F GH V + F + ++ + S DKT R+WDV T ++ +GHT V
Sbjct: 602 ------LRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVI 655
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS-DPVTAVDFNRDGTMIVTSSYD 178
+ P + +G+ D + +WD+ TGK LK + H + + ++ ++++G ++++ D
Sbjct: 656 SIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGAD 715
Query: 179 GLCRIWD 185
R+WD
Sbjct: 716 HTVRVWD 722
Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 60/228 (26%), Positives = 93/228 (40%)
Query: 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK------CLKVLPAHSD 158
+ C+ T + C++F+ + +G D ++IW + L D
Sbjct: 456 SVCMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDED 515
Query: 159 PVTAVDFNRDGTMIVTS-SYDG---LCRIWDASTG------HCMKTLIDDENPPVSFVKF 208
P GT+ TS S D L D + H N PV V F
Sbjct: 516 PTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSF 575
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSC 268
SP G + + D T RLW+ L+ + GH N C+S F NG Y+ +GS D
Sbjct: 576 SPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVS--FH-PNGCYVFTGSSDKT 632
Query: 269 VYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+W++ + V+ GHT PVIS+A P +++G+ D + +W
Sbjct: 633 CRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGS--EDGIINVW 678
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 330 (121.2 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 70/213 (32%), Positives = 115/213 (53%)
Query: 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163
TAT K L+GH V+ F P S+ ++S + D ++R WD+++ + H+ PV +
Sbjct: 328 TATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDL 387
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
D + ++SYD R+W + ++ + V VKF PN ++ G+ D T
Sbjct: 388 DISPHSLFFASASYDHTARLWSFDRTYPLR-IYAGHLAGVDCVKFHPNSNYLATGSTDKT 446
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283
+RLW+ G ++ +TGH C++ FS NG+Y+VS ED + LW+L S + + L
Sbjct: 447 VRLWSAQQGNSVRLFTGHCGPVRCLA--FS-PNGQYLVSAGEDQLLKLWDLASGTLYKDL 503
Query: 284 EGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHTD + SV ++IAS ++DN +V+IW
Sbjct: 504 HGHTDDITSVTFSLDSSVIASASMDN--SVRIW 534
Score = 286 (105.7 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 67/223 (30%), Positives = 111/223 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V F DS L+S S+D +IR WD+ + T GH V+ ++ +P S
Sbjct: 337 GHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFF 396
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S ++D T R+W L++ H V V F+ + + T S D R+W A G+
Sbjct: 397 ASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 456
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
++ L PV + FSPNG++++ D L+LW+ ++G + K GHT+ S
Sbjct: 457 SVR-LFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDD--ITSV 513
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV 293
TFS+ + I S S D+ V +W+++S+ +G + ++ V
Sbjct: 514 TFSL-DSSVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGV 555
Score = 273 (101.2 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 67/221 (30%), Positives = 101/221 (45%)
Query: 8 ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQ 67
E R T + L GH + S +F D L S S D
Sbjct: 324 EEDRTATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVL------- 376
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
+ GH V DL S S F SAS D T RLW L+ GH V CV F+P S
Sbjct: 377 -YQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNS 435
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
N + +G+ D+TVR+W + G +++ H PV + F+ +G +V++ D L ++WD +
Sbjct: 436 NYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLA 495
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+G K L ++ V FS + I ++DN++R+W+
Sbjct: 496 SGTLYKDL-HGHTDDITSVTFSLDSSVIASASMDNSVRIWD 535
Score = 238 (88.8 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 56/184 (30%), Positives = 86/184 (46%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
LESF T T GH + + S AS+S D L
Sbjct: 368 LESF---TNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYP--------L 416
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+ + GH GV + F +S +L + S DKT+RLW ++ GH V C+ F+P
Sbjct: 417 RIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPN 476
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+VS D+ +++WD+ +G K L H+D +T+V F+ D ++I ++S D RIWD
Sbjct: 477 GQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDI 536
Query: 187 STGH 190
+ H
Sbjct: 537 KSKH 540
Score = 124 (48.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F EQ ++ S D++ L + ++ +I+LW + + K +++ +N
Sbjct: 264 FYNTEQLLNTAEASPDNKLLATGLNNSSIKLWSLTSKFKSKPHQIDVSHIHLIN----DT 319
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+ V DE R T KVL H PV + F D + +++ S D R WD +
Sbjct: 320 LEV----DEEDR-----TATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLES 370
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
L PV + SP+ F + D+T RLW++ L+ Y GH C+
Sbjct: 371 -FTNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCV 429
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
PV +F P+ +L + D ++R W+ + Y GH Y + + +
Sbjct: 341 PVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHA---YPVWDLDISPHSLFFA 397
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
S S D LW ++ GH V V HP N +A+G+ D+TV++W+ ++
Sbjct: 398 SASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGS--TDKTVRLWSAQQ 454
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 85/297 (28%), Positives = 138/297 (46%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L+GH + KF G LAS+ D+ GH V +
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYAT-------LKGHSGAVME 141
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L +++D L SAS DKT+ +WD T +K L GHT++V C ++ +G+ D
Sbjct: 142 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 201
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD++ ++ ++ V AV FN I++ D ++WD T+
Sbjct: 202 TVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 260
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTG--HTNSKYCISST 251
+ V+ + S G ++L +DNT+R+W+ + +K + G H K + +
Sbjct: 261 HADS-VTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCS 319
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+S +G I GS D VY+W+ SR+++ KL GH V +A HP E II S + D
Sbjct: 320 WS-PDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 71/266 (26%), Positives = 127/266 (47%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH A+ + ++ DG +L S+S DK +++ GH V+
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGER--------VKRLKGHTSFVN 182
Query: 78 DLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
+ LV + SDD T++LWD+ ++T +T V V FN S+ I+SG D
Sbjct: 183 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGID 241
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCM 192
+++WD++ K + H+D VT + + +G+ +++++ D RIWD A C+
Sbjct: 242 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCV 301
Query: 193 KTLIDD-ENPPVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
K + N + ++ +SP+G I G+ D + +W+ ++ +IL GH S ++
Sbjct: 302 KIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGS---VN 358
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQ 275
I+S S D +Y+ E+Q
Sbjct: 359 ELAFHPEEPIILSASSDKRLYMGEIQ 384
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 61/208 (29%), Positives = 106/208 (50%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRD 168
L GH V+C F+P N + S FD + +W+V G C L HS V + +N D
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHYNTD 147
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
G+M+ ++S D +WD+ TG +K L + S + + G+ D T++LW+
Sbjct: 148 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
++T+ N+ ++ TF+ T+ + I+SG D+ + +W+L+ K+ + GH D
Sbjct: 208 IRKKAAVQTFQ---NTYQVLAVTFNDTSDQ-IISGGIDNDIKVWDLRQNKLTYTMRGHAD 263
Query: 289 PVISVASHPTENIIASGALDNDRTVKIW 316
V ++ + + S A+DN TV+IW
Sbjct: 264 SVTGLSLSSEGSYLLSNAMDN--TVRIW 289
Score = 189 (71.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 44/169 (26%), Positives = 86/169 (50%)
Query: 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKF 208
+ +L H V F+ G + ++ +D L +W+ G C + + V + +
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 144
Query: 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDS 267
+ +G + + D T+ +W+ TG+ +K GHT+ ++S + G +V +GS+D
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF---VNSCYPARRGPQLVCTGSDDG 201
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
V LW+++ + VQ + +T V++V + T + I SG +DND +K+W
Sbjct: 202 TVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDND--IKVW 247
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKILKTYTGHTNSKYCISSTFS 253
L+ V KF P G + D + LWN Y T GH+ + +
Sbjct: 88 LLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGA---VMELHY 144
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRT 312
T+G + S S D V +W+ ++ + V++L+GHT V S + ++ +G+ +D T
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS--DDGT 202
Query: 313 VKIWTQEKE 321
VK+W K+
Sbjct: 203 VKLWDIRKK 211
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 92/327 (28%), Positives = 155/327 (47%)
Query: 1 MSSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
+S S+E + L + G R I+ V+FS++G AS S
Sbjct: 150 LSGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGS--------WGGQVKVWNS 201
Query: 61 XXXXXLQKFTGHEQGVSDL-------VFSSDSRFLVSASD--DKTIRLWDVPTATCLKTL 111
+Q F GH VS L + +DS L A+ D T+ LW +T L L
Sbjct: 202 DNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRL 261
Query: 112 IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171
GH V V F+P + +VS +FD T R+WDV TG L + HS+ + ++ DG++
Sbjct: 262 EGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSL 321
Query: 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231
+ + D + RIWD +G + L D+ + + +SPNG + + D+T+++W+
Sbjct: 322 VSSGGNDAIGRIWDLRSGKSIMVL-DEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRK 380
Query: 232 GKILKTYTGHTNSKYCISSTFSVTNG--KYIVSGSEDSCVYLWELQSRKVVQKLEGHTDP 289
+ T H++ +S + +G ++I + D CV LW + +++ + GH +
Sbjct: 381 VSLAHTIPAHSS---LVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEK 437
Query: 290 VISVASHPTENIIASGALDNDRTVKIW 316
V+SV + + I+SG DRT+K+W
Sbjct: 438 VMSVDGYG-DRFISSGY---DRTIKLW 460
Score = 203 (76.5 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 56/225 (24%), Positives = 104/225 (46%)
Query: 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164
A + + IG + V F+ N SG++ V++W+ +++ H+D V+ +D
Sbjct: 162 AELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLD 221
Query: 165 F---------NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFI 215
+ + + + T + D +W AS + L + V V F P+G ++
Sbjct: 222 WYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRL-EGHLARVGRVAFHPSGDYL 280
Query: 216 LVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275
+ + D T RLW+ TG L GH+ + I+ +G + SG D+ +W+L+
Sbjct: 281 VSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQ---PDGSLVSSGGNDAIGRIWDLR 337
Query: 276 SRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
S K + L+ H ++++A P +A+ + D+ TVKIW K
Sbjct: 338 SGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADD--TVKIWDLRK 380
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 326 (119.8 bits), Expect = 4.0e-29, P = 4.0e-29
Identities = 81/237 (34%), Positives = 127/237 (53%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D +VS S D+T+ +WDV + L L GH+ V C++F + N++VSG+ D T+ IWD
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW--DASTGH--CMKTLIDDE 199
+ + LKV H+D V V + + I++SS D R+W DA++ CM L
Sbjct: 290 WQNRRPLKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRLDATSPAEACMHVL-RGH 346
Query: 200 NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259
V+ V++S I+ + D TLR W+ +TG ++ H C NGK+
Sbjct: 347 LASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY-----NGKF 401
Query: 260 IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
IVSGS D + ++E S K+++ L+GH D + +V + E I++ G D TV+IW
Sbjct: 402 IVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFND-EKIVSGGY---DGTVRIW 454
Score = 282 (104.3 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 73/215 (33%), Positives = 107/215 (49%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L K GH V L F LVS S D TI +WD LK GHT+ V V +
Sbjct: 254 LYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVS- 312
Query: 126 QSNMIVSGAFDETVRIWDVKTGK----CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
N I+S + D T R+W + C+ VL H V +V ++ +IVT+S D
Sbjct: 313 -ENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTL 371
Query: 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
R WD +TGHC++ +I ++ ++ NGKFI+ G+ D T+R++ S+GK+L+ GH
Sbjct: 372 RTWDITTGHCIR-IIHAHQRGIACAQY--NGKFIVSGSSDLTIRIFEASSGKLLRMLQGH 428
Query: 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
+ + T + K IVSG D V +W +
Sbjct: 429 ED----LIRTVRFNDEK-IVSGGYDGTVRIWNFNT 458
Score = 261 (96.9 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 56/164 (34%), Positives = 93/164 (56%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V+ + +SS + +V+AS D+T+R WD+ T C++ + H + C +N I
Sbjct: 345 GHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYN--GKFI 402
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG- 189
VSG+ D T+RI++ +GK L++L H D + V FN + IV+ YDG RIW+ +TG
Sbjct: 403 VSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDE--KIVSGGYDGTVRIWNFNTGE 460
Query: 190 -HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
HC+ L + N V ++F + + I+ T + + +WN+ G
Sbjct: 461 QHCV--LHNSRNSRVFGLQF--DHRRIIACTHSSEILVWNFDDG 500
Score = 255 (94.8 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 56/172 (32%), Positives = 98/172 (56%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV----PTATCLKTLIGHTNYVFCV 121
L+ + GH V +V S + +++S+S D T R+W + P C+ L GH V V
Sbjct: 296 LKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV 353
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
++ ++ +IV+ + D T+R WD+ TG C++++ AH + +N G IV+ S D
Sbjct: 354 QYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYN--GKFIVSGSSDLTI 411
Query: 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233
RI++AS+G ++ L E+ + V+F N + I+ G D T+R+WN++TG+
Sbjct: 412 RIFEASSGKLLRMLQGHEDL-IRTVRF--NDEKIVSGGYDGTVRIWNFNTGE 460
Score = 172 (65.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 47/172 (27%), Positives = 86/172 (50%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GHL +++SV++S L+ ++S+D+ ++ H++G++
Sbjct: 343 LRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHC--------IRIIHAHQRGIAC 394
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
++ +F+VS S D TIR+++ + L+ L GH + + V FN + IVSG +D T
Sbjct: 395 AQYNG--KFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK--IVSGGYDGT 450
Query: 139 VRIWDVKTGKCLKVLP-AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
VRIW+ TG+ VL + + V + F D I+ ++ +W+ G
Sbjct: 451 VRIWNFNTGEQHCVLHNSRNSRVFGLQF--DHRRIIACTHSSEILVWNFDDG 500
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 83/274 (30%), Positives = 136/274 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T ++L GH +AI+ V S DG S S D ++ F GH
Sbjct: 63 TAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGET--------IRSFIGHT 114
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG--HTNYVFCVNFNPQSN--M 129
V + FS D+R +VSAS DKTI+LW+ A C T+ HT+++ CV F+P N +
Sbjct: 115 SDVFSVSFSPDNRQIVSASRDKTIKLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAI 173
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
IVS +D+ V++W++K K L H+ + V + DG++ + DG+ ++WD G
Sbjct: 174 IVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEG 233
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK---- 245
+ +L + ++ + FSP ++ T D +R+WN + I+ SK
Sbjct: 234 KHLYSL--ETGSTINSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEIYPVKQSKIGVP 290
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV 279
+C S T+S NG+ + GS D +Y++E++ V
Sbjct: 291 WCTSLTWSA-NGQLLYCGSTDGNIYVYEVKKHSV 323
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 75/270 (27%), Positives = 131/270 (48%)
Query: 21 GHLRAISSVKFSHDGRL--LASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
GH ++SV D +L + S+S DK + TGH Q ++D
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAK-KSLTGHSQAIND 77
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ SSD F +S S D ++RLWD+ +++ IGHT+ VF V+F+P + IVS + D+T
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 139 VRIWDVKTGKCLKVLP--AHSDPVTAVDFNR--DGTMIVTSSYDGLCRIWDASTGHCMKT 194
+++W+ +C + H+D +T V F+ + +IV+ +D L ++W+ K
Sbjct: 138 IKLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN 196
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY-TGHTNSKYCISSTFS 253
L + ++ V SP+G G D +LW+ GK L + TG T + C S
Sbjct: 197 L-EGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPC-- 253
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283
Y + + D + +W L+S+ ++ ++
Sbjct: 254 ----DYWLCAATDRFIRIWNLESKLIISEI 279
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 71/265 (26%), Positives = 135/265 (50%)
Query: 71 GHEQGVSDLVFSSDSRF--LVSASDDKTIRLWDVPT-------ATCLKTLIGHTNYVFCV 121
GH V+ + +D + +VSAS DK + +W++ T T K+L GH+ + V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+ + +SG++D +VR+WD+ G+ ++ H+ V +V F+ D IV++S D
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 182 RIWDASTGHCMKTLIDDENPP-VSFVKFSPN-GKFILVGT-LDNTLRLWNYSTGKILKTY 238
++W+ + C T+ D ++ ++ V+FSP+ + I+V D +++WN + K
Sbjct: 139 KLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNL 197
Query: 239 TGHTNSKYCISSTFSVT-NGKYIVSGSEDSCVYLWELQSRKVVQKLE-GHTDPVISVASH 296
GHT + +T +++ +G SG +D LW+++ K + LE G T + S+
Sbjct: 198 EGHTG----VLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST--INSLCFS 251
Query: 297 PTENIIASGALDNDRTVKIWTQEKE 321
P + + + DR ++IW E +
Sbjct: 252 PCDYWLCAAT---DRFIRIWNLESK 273
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 83/274 (30%), Positives = 136/274 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T ++L GH +AI+ V S DG S S D ++ F GH
Sbjct: 63 TAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGET--------IRSFIGHT 114
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG--HTNYVFCVNFNPQSN--M 129
V + FS D+R +VSAS DKTI+LW+ A C T+ HT+++ CV F+P N +
Sbjct: 115 SDVFSVSFSPDNRQIVSASRDKTIKLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAI 173
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
IVS +D+ V++W++K K L H+ + V + DG++ + DG+ ++WD G
Sbjct: 174 IVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEG 233
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK---- 245
+ +L + ++ + FSP ++ T D +R+WN + I+ SK
Sbjct: 234 KHLYSL--ETGSTINSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEIYPVKQSKIGVP 290
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV 279
+C S T+S NG+ + GS D +Y++E++ V
Sbjct: 291 WCTSLTWSA-NGQLLYCGSTDGNIYVYEVKKHSV 323
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 75/270 (27%), Positives = 131/270 (48%)
Query: 21 GHLRAISSVKFSHDGRL--LASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
GH ++SV D +L + S+S DK + TGH Q ++D
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAK-KSLTGHSQAIND 77
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ SSD F +S S D ++RLWD+ +++ IGHT+ VF V+F+P + IVS + D+T
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 139 VRIWDVKTGKCLKVLP--AHSDPVTAVDFNR--DGTMIVTSSYDGLCRIWDASTGHCMKT 194
+++W+ +C + H+D +T V F+ + +IV+ +D L ++W+ K
Sbjct: 138 IKLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN 196
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY-TGHTNSKYCISSTFS 253
L + ++ V SP+G G D +LW+ GK L + TG T + C S
Sbjct: 197 L-EGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPC-- 253
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283
Y + + D + +W L+S+ ++ ++
Sbjct: 254 ----DYWLCAATDRFIRIWNLESKLIISEI 279
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 71/265 (26%), Positives = 135/265 (50%)
Query: 71 GHEQGVSDLVFSSDSRF--LVSASDDKTIRLWDVPT-------ATCLKTLIGHTNYVFCV 121
GH V+ + +D + +VSAS DK + +W++ T T K+L GH+ + V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+ + +SG++D +VR+WD+ G+ ++ H+ V +V F+ D IV++S D
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 182 RIWDASTGHCMKTLIDDENPP-VSFVKFSPN-GKFILVGT-LDNTLRLWNYSTGKILKTY 238
++W+ + C T+ D ++ ++ V+FSP+ + I+V D +++WN + K
Sbjct: 139 KLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNL 197
Query: 239 TGHTNSKYCISSTFSVT-NGKYIVSGSEDSCVYLWELQSRKVVQKLE-GHTDPVISVASH 296
GHT + +T +++ +G SG +D LW+++ K + LE G T + S+
Sbjct: 198 EGHTG----VLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST--INSLCFS 251
Query: 297 PTENIIASGALDNDRTVKIWTQEKE 321
P + + + DR ++IW E +
Sbjct: 252 PCDYWLCAAT---DRFIRIWNLESK 273
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 328 (120.5 bits), Expect = 4.8e-29, P = 4.8e-29
Identities = 77/235 (32%), Positives = 129/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 333
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V TG+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 334 VNTGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 392 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 444
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 445 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 495
Score = 266 (98.7 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 67/208 (32%), Positives = 109/208 (52%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV T L TLI H V + FN + M
Sbjct: 304 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGM 359
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 360 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 417
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 418 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 474
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWEL 274
CI F + K IVSG+ D + +W+L
Sbjct: 475 CIR--F---DNKRIVSGAYDGKIKVWDL 497
Score = 222 (83.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 60/181 (33%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 381 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 430
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 431 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 486
Query: 134 AFDETVRIWDV--------KTGK-CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ G CL+ L HS V + F D IV+SS+D IW
Sbjct: 487 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 544
Query: 185 D 185
D
Sbjct: 545 D 545
Score = 197 (74.4 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 346 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 401
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 402 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 459
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 460 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 516
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWELQSRKVVQ 281
+ V ++ IVS S D + +W+ + Q
Sbjct: 517 EHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 553
Score = 142 (55.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 51/177 (28%), Positives = 83/177 (46%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T +TLNGH R I+ +++ D RL+ S S+D
Sbjct: 407 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGAC-- 462
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--------PTAT-CLKT 110
L+ GHE+ V + F D++ +VS + D I++WD+ P T CL+T
Sbjct: 463 ------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 514
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L+ H+ VF + F+ IVS + D+T+ IWD + P S T +R
Sbjct: 515 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYISR 569
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 324 (119.1 bits), Expect = 5.4e-29, P = 5.4e-29
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 190 NSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIV 245
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 246 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 303
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 304 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 361
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 362 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 414
Query: 310 DRTVKIW 316
+K+W
Sbjct: 415 K--IKVW 419
Score = 270 (100.1 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 224 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 280
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 281 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 337
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 338 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 394
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 395 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 423
Score = 224 (83.9 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 305 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 354
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 355 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 410
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 411 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 468
Query: 185 D 185
D
Sbjct: 469 D 469
Score = 200 (75.5 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 225 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 274
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 275 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 330
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 331 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 388
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 389 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 445
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 446 VFRLQFDEFQIISSSHDDTILIWD 469
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 44/154 (28%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD S+ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 200 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 256
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 257 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 311
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 312 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 340
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 327 (120.2 bits), Expect = 5.9e-29, P = 5.9e-29
Identities = 77/235 (32%), Positives = 129/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 328
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V TG+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 329 VNTGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 387 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 439
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 440 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 490
Score = 266 (98.7 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 67/208 (32%), Positives = 109/208 (52%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV T L TLI H V + FN + M
Sbjct: 299 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGM 354
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 355 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 412
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 413 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 469
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWEL 274
CI F + K IVSG+ D + +W+L
Sbjct: 470 CIR--F---DNKRIVSGAYDGKIKVWDL 492
Score = 222 (83.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 60/181 (33%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 376 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 425
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 426 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 481
Query: 134 AFDETVRIWDV--------KTGK-CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ G CL+ L HS V + F D IV+SS+D IW
Sbjct: 482 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 539
Query: 185 D 185
D
Sbjct: 540 D 540
Score = 197 (74.4 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 341 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 396
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 397 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 454
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 455 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 511
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWELQSRKVVQ 281
+ V ++ IVS S D + +W+ + Q
Sbjct: 512 EHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 548
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 51/177 (28%), Positives = 83/177 (46%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T +TLNGH R I+ +++ D RL+ S S+D
Sbjct: 402 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGAC-- 457
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--------PTAT-CLKT 110
L+ GHE+ V + F D++ +VS + D I++WD+ P T CL+T
Sbjct: 458 ------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 509
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L+ H+ VF + F+ IVS + D+T+ IWD + P S T +R
Sbjct: 510 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYISR 564
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 330 (121.2 bits), Expect = 6.1e-29, P = 6.1e-29
Identities = 76/240 (31%), Positives = 124/240 (51%)
Query: 83 SDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
+DS R L S D +R+ D + ++L+GHT V+ F P+ N+++S + D T+R+
Sbjct: 417 ADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRL 476
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENP 201
W + T C+ H PV V F G V+ SYD R+W + ++ + +
Sbjct: 477 WSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSD 536
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS-TFSVTNGKYI 260
V V+F PN ++ G+ D T+RLW+ TG+ ++ TGH S +SS FS G+Y+
Sbjct: 537 -VDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGS---VSSLAFSAC-GRYL 591
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
SGS D + +W+L + +V L HT V ++ ++A+ LDN+ T +W K
Sbjct: 592 ASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLT--LWDFHK 649
Score = 287 (106.1 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 68/224 (30%), Positives = 109/224 (48%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+T++L GH + F+ + LL S S D + GH
Sbjct: 442 VTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVT--------YRGHVY 493
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V D+ F+ + VS S DKT RLW + L+ +GH + V CV F+P SN + +G+
Sbjct: 494 PVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGS 553
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D TVR+WD TG+ ++++ H V+++ F+ G + + S D IWD S G + T
Sbjct: 554 SDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTT 613
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238
L+ + V+ + FS +G + LDN L LW++ K+ + Y
Sbjct: 614 LLRHTST-VTTITFSRDGTVLAAAGLDNNLTLWDFH--KVTEDY 654
Score = 239 (89.2 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 66/237 (27%), Positives = 113/237 (47%)
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
QGV+ S DS L D ++R+W + A L+TL + + +
Sbjct: 378 QGVTCAEISDDSTMLACGFGDSSVRIWSLTPAK-LRTL---------KDADSLRELDKES 427
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
A D VR+ D ++G+ + L H+ PV F + ++++ S D R+W T C+
Sbjct: 428 A-DINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVV 486
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
T P V V+F+P+G + + + D T RLW + + L+ + GH + C+ F
Sbjct: 487 TYRGHVYP-VWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQ--FH 543
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
N Y+ +GS D V LW+ + + V+ + GH V S+A +ASG++D++
Sbjct: 544 -PNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHN 599
Score = 227 (85.0 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 51/186 (27%), Positives = 84/186 (45%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D ++ S ++ T GH+ + V+F+ G S S DK
Sbjct: 469 SEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQA-- 526
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L+ F GH V + F +S ++ + S D+T+RLWD T ++ + GH V
Sbjct: 527 ------LRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVS 580
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+ + SG+ D + IWD+ G + L H+ VT + F+RDGT++ + D
Sbjct: 581 SLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDN 640
Query: 180 LCRIWD 185
+WD
Sbjct: 641 NLTLWD 646
Score = 196 (74.1 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 60/207 (28%), Positives = 90/207 (43%)
Query: 102 VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT 161
+P+A L H V C + S M+ G D +VRIW + K L+ L +D +
Sbjct: 365 LPSAVFYTVLNSHQG-VTCAEISDDSTMLACGFGDSSVRIWSLTPAK-LRTLK-DADSLR 421
Query: 162 AVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD 221
+D S D R+ D +G ++L+ P V F+P +L + D
Sbjct: 422 ELD---------KESADINVRMLDDRSGEVTRSLMGHTGP-VYRCAFAPEMNLLLSCSED 471
Query: 222 NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ 281
+T+RLW+ T + TY GH Y + +G Y VS S D LW S + ++
Sbjct: 472 STIRLWSLLTWSCVVTYRGHV---YPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALR 528
Query: 282 KLEGHTDPVISVASHPTENIIASGALD 308
GH V V HP N +A+G+ D
Sbjct: 529 VFVGHLSDVDCVQFHPNSNYVATGSSD 555
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 328 (120.5 bits), Expect = 6.2e-29, P = 6.2e-29
Identities = 77/235 (32%), Positives = 129/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V TG+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 480
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 531
Score = 266 (98.7 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 67/208 (32%), Positives = 109/208 (52%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV T L TLI H V + FN + M
Sbjct: 340 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 453
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 454 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 510
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWEL 274
CI F + K IVSG+ D + +W+L
Sbjct: 511 CIR--F---DNKRIVSGAYDGKIKVWDL 533
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 60/181 (33%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 417 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 466
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 467 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 522
Query: 134 AFDETVRIWDV--------KTGK-CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ G CL+ L HS V + F D IV+SS+D IW
Sbjct: 523 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 580
Query: 185 D 185
D
Sbjct: 581 D 581
Score = 197 (74.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 382 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 437
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 495
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 496 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWELQSRKVVQ 281
+ V ++ IVS S D + +W+ + Q
Sbjct: 553 EHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 589
Score = 142 (55.0 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 51/177 (28%), Positives = 83/177 (46%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T +TLNGH R I+ +++ D RL+ S S+D
Sbjct: 443 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGAC-- 498
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--------PTAT-CLKT 110
L+ GHE+ V + F D++ +VS + D I++WD+ P T CL+T
Sbjct: 499 ------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 550
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L+ H+ VF + F+ IVS + D+T+ IWD + P S T +R
Sbjct: 551 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYISR 605
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 331 (121.6 bits), Expect = 6.5e-29, P = 6.5e-29
Identities = 76/267 (28%), Positives = 136/267 (50%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV---PTATCLKT-----------LIGH 114
F ++ + F+ DS + + D I+LW + P + LK LIGH
Sbjct: 457 FHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGH 516
Query: 115 TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174
+ V+ V+F+P + ++S + D+TVR+W + T L H+ PV V F+ G VT
Sbjct: 517 SGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVT 576
Query: 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI 234
+S+D R+W + ++ N V V+F PN ++ G+ D T R+W+ TG
Sbjct: 577 ASHDQTARLWATDHIYPLRIFAGHIND-VDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNC 635
Query: 235 LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI-SV 293
++ + GHTNS C++ + +G+++ SG ED + +W++ S + ++ + GH + S+
Sbjct: 636 VRVFLGHTNSVNCLAVS---PDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSL 692
Query: 294 ASHPTENIIASGALDNDRTVKIWTQEK 320
A ++ SG DN +V++W +K
Sbjct: 693 AFSRDGTVLVSGCADN--SVRVWDVKK 717
Score = 323 (118.8 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 70/218 (32%), Positives = 109/218 (50%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
+P T+ L GH + V FS D + L S S DK L +
Sbjct: 505 KPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTA--------LVSYK 556
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH Q V D+ FS + V+AS D+T RLW L+ GH N V CV F+P SN +
Sbjct: 557 GHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYV 616
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+G+ D+T R+WDV TG C++V H++ V + + DG + + DG+ +WD +G
Sbjct: 617 FTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGR 676
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+K++ + + FS +G ++ G DN++R+W+
Sbjct: 677 RLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 57/187 (30%), Positives = 94/187 (50%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D+++ S YT + GH + + VKFS G ++S D+
Sbjct: 536 SEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYP-- 593
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L+ F GH V + F +S ++ + S DKT R+WDV T C++ +GHTN V
Sbjct: 594 ------LRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVN 647
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVTSSYD 178
C+ +P + SG D + +WD+ +G+ LK + H+ + ++ F+RDGT++V+ D
Sbjct: 648 CLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCAD 707
Query: 179 GLCRIWD 185
R+WD
Sbjct: 708 NSVRVWD 714
Score = 243 (90.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 71/252 (28%), Positives = 115/252 (45%)
Query: 86 RFLVSASDDKT-IRLWDVPTA---TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
+ ++ D ++ I+L + + C+ T N + C+ FN S ++ +G D +++
Sbjct: 428 KMIIQVEDSRSKIKLGAIQASLPSVCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKL 487
Query: 142 WDVKTGKCLK-VL------P--------AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
W + GK LK VL P HS PV V F+ D +++ S D R+W
Sbjct: 488 WSLD-GKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSL 546
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI--LKTYTGHTNS 244
T + + PV VKFSP G + + + D T RLW +T I L+ + GH N
Sbjct: 547 DTYTALVSY-KGHTQPVWDVKFSPLGHYFVTASHDQTARLW--ATDHIYPLRIFAGHIND 603
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
C+ F N Y+ +GS D +W++ + V+ GHT+ V +A P +AS
Sbjct: 604 VDCVE--FH-PNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLAS 660
Query: 305 GALDNDRTVKIW 316
G D + +W
Sbjct: 661 GG--EDGIICVW 670
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 327 (120.2 bits), Expect = 6.5e-29, P = 6.5e-29
Identities = 90/316 (28%), Positives = 147/316 (46%)
Query: 10 FRPYTLTQTLNGHLRAISSVK-FSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK 68
F P T +GH + ISS++ F LL S S D ++
Sbjct: 272 FLPKAHIHTWSGHNKGISSIRWFPKTAHLLLSGSMD-------CRVKLWEVYGERRCIRT 324
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F+GH Q + D+ +++ +SAS D+ I+LWD T + FCV F+P ++
Sbjct: 325 FSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTR-KMPFCVKFHPDNS 383
Query: 129 ---MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ V+G D+ + WD ++G ++ H V+ + F D VT+S D RIW+
Sbjct: 384 KQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWE 443
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN-YSTGKI--LKTYTGHT 242
MK + D + V +PNGK++ +LDN + +++ + K+ KT+TGH
Sbjct: 444 WDIPVDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHM 503
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE--N 300
S Y FS + Y+VSG D Y+W+ ++ K+ +K + H IS HP E
Sbjct: 504 VSGYACQLDFS-PDMSYLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASK 562
Query: 301 IIASGALDNDRTVKIW 316
++ +G D +K W
Sbjct: 563 VVTAGW---DGQIKYW 575
Score = 127 (49.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 39/170 (22%), Positives = 70/170 (41%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF-CVNFN 124
+Q++ H VS + F D+R V+ SDDK++R+W+ +K + T + V
Sbjct: 408 VQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMKYIADPTMHSMPAVTLA 467
Query: 125 PQSNMIVSGAFDETVRIWDV----KTGKCLKVLPAH--SDPVTAVDFNRDGTMIVTSSYD 178
P + + D + I+ K + K H S +DF+ D + +V+ D
Sbjct: 468 PNGKWMACQSLDNKIVIFSALNRFKMNR-KKTFTGHMVSGYACQLDFSPDMSYLVSGDGD 526
Query: 179 GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
G C IWD T K + +S + ++ D ++ W+
Sbjct: 527 GKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKVVTAGWDGQIKYWD 576
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 327 (120.2 bits), Expect = 7.9e-29, P = 7.9e-29
Identities = 77/235 (32%), Positives = 129/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V TG+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 480
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 531
Score = 266 (98.7 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 67/208 (32%), Positives = 109/208 (52%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV T L TLI H V + FN + M
Sbjct: 340 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 453
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 454 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 510
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWEL 274
CI F + K IVSG+ D + +W+L
Sbjct: 511 CIR--F---DNKRIVSGAYDGKIKVWDL 533
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 60/181 (33%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 417 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 466
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 467 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 522
Query: 134 AFDETVRIWDV--------KTGK-CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ G CL+ L HS V + F D IV+SS+D IW
Sbjct: 523 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 580
Query: 185 D 185
D
Sbjct: 581 D 581
Score = 197 (74.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 382 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 437
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 495
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 496 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWELQSRKVVQ 281
+ V ++ IVS S D + +W+ + Q
Sbjct: 553 EHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 589
Score = 142 (55.0 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 51/177 (28%), Positives = 83/177 (46%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T +TLNGH R I+ +++ D RL+ S S+D
Sbjct: 443 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGAC-- 498
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--------PTAT-CLKT 110
L+ GHE+ V + F D++ +VS + D I++WD+ P T CL+T
Sbjct: 499 ------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 550
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L+ H+ VF + F+ IVS + D+T+ IWD + P S T +R
Sbjct: 551 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYISR 605
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 323 (118.8 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 76/235 (32%), Positives = 128/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 270
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V G+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 271 VNAGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 329 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 381
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 382 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 432
Score = 262 (97.3 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 66/210 (31%), Positives = 109/210 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV L TLI H V + FN + M
Sbjct: 241 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGM 296
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 297 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 354
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 355 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 411
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+L +
Sbjct: 412 CIR--F---DNKRIVSGAYDGKIKVWDLMA 436
Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 59/181 (32%), Positives = 88/181 (48%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 318 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 367
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 368 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 423
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ CL+ L HS V + F D IV+SS+D IW
Sbjct: 424 AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 481
Query: 185 D 185
D
Sbjct: 482 D 482
Score = 197 (74.4 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 55/209 (26%), Positives = 103/209 (49%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 283 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 338
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 339 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 396
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 397 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 453
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWE 273
+ V ++ IVS S D + +W+
Sbjct: 454 EHSGRVFRLQFDEFQIVSSSHDDTILIWD 482
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 51/177 (28%), Positives = 82/177 (46%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T +TLNGH R I+ +++ D RL+ S S+D
Sbjct: 344 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGAC-- 399
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--------PTAT-CLKT 110
L+ GHE+ V + F D++ +VS + D I++WD+ P T CL+T
Sbjct: 400 ------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 451
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L+ H+ VF + F+ IVS + D+T+ IWD P S T +R
Sbjct: 452 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWDFLNDPATHAEPPRSPSRTYTYISR 506
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 324 (119.1 bits), Expect = 8.9e-29, P = 8.9e-29
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 224 NSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIV 279
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 280 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 337
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 338 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 395
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 396 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 448
Query: 310 DRTVKIW 316
+K+W
Sbjct: 449 K--IKVW 453
Score = 270 (100.1 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 258 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 314
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 315 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 371
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 372 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 429 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 457
Score = 224 (83.9 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 339 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 388
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 389 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 444
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 445 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 502
Query: 185 D 185
D
Sbjct: 503 D 503
Score = 200 (75.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 259 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 308
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 309 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 364
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 365 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 422
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 423 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 479
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 480 VFRLQFDEFQIISSSHDDTILIWD 503
Score = 152 (58.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 44/154 (28%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD S+ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 234 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 290
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 291 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 345
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 346 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 374
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 328 (120.5 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 79/237 (33%), Positives = 126/237 (53%)
Query: 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF 135
+ + FS D +FL + ++D+ IR+WD+ + L GH ++ +++ P + +VSG+
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 505
Query: 136 DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTGHCMKT 194
D TVRIWD++TG+C L D VT V + DG I S D R+WD+ TG ++
Sbjct: 506 DRTVRIWDLRTGQCSLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER 564
Query: 195 LIDDENPP-------VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
L D EN V V F+ +G+ ++ G+LD +++LWN K+ + NS C
Sbjct: 565 L-DSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN-KSDSKTPNSGTC 622
Query: 248 ----------ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294
+ S + N +YI+SGS+D V W+ +S + L+GH + VISVA
Sbjct: 623 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA 679
Score = 286 (105.7 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 75/223 (33%), Positives = 114/223 (51%)
Query: 117 YVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS 176
Y+ V F+P + +GA D +RIWD++ K + +L H + ++D+ G +V+ S
Sbjct: 445 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS 504
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKIL 235
D RIWD TG C TL ++ V+ V SP +GK+I G+LD +R+W+ TG ++
Sbjct: 505 GDRTVRIWDLRTGQCSLTLSIEDG--VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 562
Query: 236 KTY-------TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS--RKVVQKLE-- 284
+ TGH +S Y + T +G+ +VSGS D V LW LQ+ K K
Sbjct: 563 ERLDSENESGTGHKDSVYSVVFT---RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS 619
Query: 285 --------GHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
GH D V+SVA+ + I SG+ DR V W ++
Sbjct: 620 GTCEVTYIGHKDFVLSVATTQNDEYILSGS--KDRGVLFWDKK 660
Score = 268 (99.4 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 77/274 (28%), Positives = 126/274 (45%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD--L 79
H + VKFS+DG LA+ +K H +++
Sbjct: 343 HTSVVCCVKFSNDGEYLATG-CNKTTQVYRVSDGSLVARLSDDSAAN--NHRNSITENNT 399
Query: 80 VFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTN---------YVFCVNFNPQSNMI 130
S+D+ + + + TI + +A L + + N Y+ V F+P +
Sbjct: 400 TTSTDNNTMTTTTTT-TITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFL 458
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+GA D +RIWD++ K + +L H + ++D+ G +V+ S D RIWD TG
Sbjct: 459 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 518
Query: 191 CMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTY-------TGHT 242
C TL ++ V+ V SP +GK+I G+LD +R+W+ TG +++ TGH
Sbjct: 519 CSLTLSIEDG--VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK 576
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
+S Y + T +G+ +VSGS D V LW LQ+
Sbjct: 577 DSVYSVVFT---RDGQSVVSGSLDRSVKLWNLQN 607
Score = 191 (72.3 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 63/206 (30%), Positives = 93/206 (45%)
Query: 26 ISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVFSSDS 85
I SV FS DG+ LA+ + D+ LQ GHEQ + L +
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMI-----LQ---GHEQDIYSLDYFPSG 497
Query: 86 RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDV 144
LVS S D+T+R+WD+ T C TL + V V +P I +G+ D VR+WD
Sbjct: 498 DKLVSGSGDRTVRIWDLRTGQCSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDS 556
Query: 145 KTGKCLKVLPA-------HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
+TG ++ L + H D V +V F RDG +V+ S D ++W+ + K+
Sbjct: 557 ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN-NKSDSK 615
Query: 198 DENPPVSFVKFSPNGKFIL-VGTLDN 222
N V + + F+L V T N
Sbjct: 616 TPNSGTCEVTYIGHKDFVLSVATTQN 641
Score = 179 (68.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 58/224 (25%), Positives = 103/224 (45%)
Query: 112 IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA------HSDPVTA--V 163
+ HT+ V CV F+ + +G ++T +++ V G + L H + +T
Sbjct: 341 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANNHRNSITENNT 399
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL--IDDENPPVS--FVK---FSPNGKFIL 216
+ D + T++ + S K + ++ + P S +++ FSP+GKF+
Sbjct: 400 TTSTDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLA 459
Query: 217 VGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
G D +R+W+ KI+ GH Y + +G +VSGS D V +W+L++
Sbjct: 460 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY---FPSGDKLVSGSGDRTVRIWDLRT 516
Query: 277 RKVVQKLEGHTDPVISVASHPTEN-IIASGALDNDRTVKIWTQE 319
+ L D V +VA P + IA+G+LD R V++W E
Sbjct: 517 GQCSLTLSIE-DGVTTVAVSPGDGKYIAAGSLD--RAVRVWDSE 557
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/240 (24%), Positives = 93/240 (38%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ L GH + I S+ + G L S S D+ E
Sbjct: 477 IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI---------ED 527
Query: 75 GVSDLVFS-SDSRFLVSASDDKTIRLWDVPTATCLKTL-------IGHTNYVFCVNFNPQ 126
GV+ + S D +++ + S D+ +R+WD T ++ L GH + V+ V F
Sbjct: 528 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 587
Query: 127 SNMIVSGAFDETVRIW---------DVKT---GKCLKVLPAHSDPVTAVDFNRDGTMIVT 174
+VSG+ D +V++W D KT G C H D V +V ++ I++
Sbjct: 588 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS 647
Query: 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFV--KFSPNG---KFILVGTLDNTLRLWNY 229
S D WD +G+ + L N +S SP G G+ D R+W Y
Sbjct: 648 GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARIWKY 707
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/239 (24%), Positives = 98/239 (41%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSA----------SDDKTI-RLWDVPTATCLKTLIGH 114
L K H V + FS+D +L + SD + RL D A + I
Sbjct: 337 LHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANNHRNSITE 396
Query: 115 TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-----VTAVDFNRDG 169
N + N + + T + K ++ L S P + +V F+ DG
Sbjct: 397 NNTTTSTDNNTMTTTTTT-TITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDG 455
Query: 170 TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
+ T + D L RIWD + L E S F P+G ++ G+ D T+R+W+
Sbjct: 456 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF-PSGDKLVSGSGDRTVRIWDL 514
Query: 230 STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
TG+ T + + S +GKYI +GS D V +W+ ++ +V++L+ +
Sbjct: 515 RTGQCSLTLSIEDG---VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE 570
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 324 (119.1 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 239 NSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDER--VIV 294
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 295 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 352
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 410
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 411 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 463
Query: 310 DRTVKIW 316
+K+W
Sbjct: 464 K--IKVW 468
Score = 270 (100.1 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 273 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 329
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 330 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 386
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 387 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 444 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 472
Score = 224 (83.9 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 354 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 403
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 404 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 459
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 460 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 517
Query: 185 D 185
D
Sbjct: 518 D 518
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 274 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 323
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 324 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 379
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 380 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 437
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 438 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 494
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 495 VFRLQFDEFQIISSSHDDTILIWD 518
Score = 152 (58.6 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 44/154 (28%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD S+ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 305
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 306 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 360
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 361 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 389
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 91/310 (29%), Positives = 150/310 (48%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P +TL+ A+ +V+F+ DG + +DK L+ ++G
Sbjct: 14 PQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTL--------LRTYSG 65
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H V D S D+ L S DK + LWDV + ++ GH V V FN ++ +I+
Sbjct: 66 HGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVIL 125
Query: 132 SGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
SG+ D ++R WD ++ + ++ L D V++V + D I+ S DG R +D G
Sbjct: 126 SGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKVS-DHE-ILAGSVDGRVRRYDLRMG 183
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ P++ FS +G+ LV +LD+TLRL + TG++L Y GH N +Y +
Sbjct: 184 QLFSDYVGS---PITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLD 240
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
S + ++VS SED V+ W+L + L + V S+A HPTE + + A+
Sbjct: 241 CCLSERD-THVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHPTEPCLLT-AMGG 298
Query: 310 DRTVKIWTQE 319
+V+ W +E
Sbjct: 299 --SVQCWREE 306
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 329 (120.9 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 62/150 (41%), Positives = 95/150 (63%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
L S SDD+T+RLWD T + +TL GH+ +V V F+P ++ SG+FD+TVR+WD TG
Sbjct: 710 LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATG 769
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
+ L HS+ V +V F+ DG ++ + S+D R+WD +TG +TL + V V
Sbjct: 770 SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTL-RGHSDTVRSVA 828
Query: 208 FSPNGKFILVGTLDNTLRLWNYSTGKILKT 237
FSP+G+ + G+ D T+RLW+ +TG + +T
Sbjct: 829 FSPDGRLLASGSFDKTVRLWDPATGTLQQT 858
Score = 316 (116.3 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 67/164 (40%), Positives = 97/164 (59%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
Q GH V + FS D R L S S DKT+RLWD T + +TL GH+N+V V F+P
Sbjct: 731 QTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPD 790
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
++ SG+FD+TVR+WD TG + L HSD V +V F+ DG ++ + S+D R+WD
Sbjct: 791 GRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDP 850
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFIL--VGTLDNTLRLWN 228
+TG +TLI V+ ++FS +G +I +G+L+ R N
Sbjct: 851 ATGTLQQTLIIKGT--VTELQFSQDGSYISTNLGSLNIQSRCGN 892
Score = 286 (105.7 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 66/176 (37%), Positives = 102/176 (57%)
Query: 108 LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L+TL GH+N V+ V + SG+ DETVR+WD TG + L HS V +V F+
Sbjct: 696 LQTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSP 747
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
DG ++ + S+D R+WD +TG +TL N V V FSP+G+ + G+ D T+RLW
Sbjct: 748 DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNW-VRSVAFSPDGRLLASGSFDKTVRLW 806
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283
+ +TG + +T GH+++ ++ FS +G+ + SGS D V LW+ + + Q L
Sbjct: 807 DPATGSLQQTLRGHSDTVRSVA--FS-PDGRLLASGSFDKTVRLWDPATGTLQQTL 859
Score = 284 (105.0 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 70/176 (39%), Positives = 93/176 (52%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D+++ + P T L QTL GH + SV FS DGRLLAS S DK
Sbjct: 714 SDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQ- 772
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
Q GH V + FS D R L S S DKT+RLWD T + +TL GH++ V
Sbjct: 773 -------QTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVR 825
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS 175
V F+P ++ SG+FD+TVR+WD TG + L VT + F++DG+ I T+
Sbjct: 826 SVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT-VTELQFSQDGSYISTN 880
Score = 272 (100.8 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 73/208 (35%), Positives = 112/208 (53%)
Query: 118 VFCVN--FNPQSNMIVSGAFDETVRIW-------DVKTGKCLKVLPAHSDPVTAVDFNRD 168
++C F PQ+ +I S F E + W + K G L+ L HS+ V AV
Sbjct: 656 IYCAGLVFAPQTALIRSN-FSEDLPSWICQLPKVNEKWGAELQTLEGHSNSVWAV----- 709
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ + S D R+WD +TG +TL + + V V FSP+G+ + G+ D T+RLW+
Sbjct: 710 ---LASGSDDETVRLWDPATGSLQQTL-EGHSGWVLSVAFSPDGRLLASGSFDKTVRLWD 765
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
+TG + +T GH+N + S FS +G+ + SGS D V LW+ + + Q L GH+D
Sbjct: 766 PATGSLQQTLRGHSN--WVRSVAFS-PDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSD 822
Query: 289 PVISVASHPTENIIASGALDNDRTVKIW 316
V SVA P ++ASG+ D +TV++W
Sbjct: 823 TVRSVAFSPDGRLLASGSFD--KTVRLW 848
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 321 (118.1 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 207 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 262
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 263 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 320
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 321 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 378
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 379 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 431
Query: 310 DRTVKIW 316
+K+W
Sbjct: 432 K--IKVW 436
Score = 270 (100.1 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 241 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 297
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 298 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 354
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 355 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 411
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 412 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 440
Score = 224 (83.9 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 322 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 371
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 372 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 427
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 428 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 485
Query: 185 D 185
D
Sbjct: 486 D 486
Score = 200 (75.5 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 242 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 291
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 292 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 347
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 348 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 405
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 406 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 462
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 463 VFRLQFDEFQIISSSHDDTILIWD 486
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD ++ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 273
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 274 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 328
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 329 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 357
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 321 (118.1 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 207 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 262
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 263 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 320
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 321 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 378
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 379 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 431
Query: 310 DRTVKIW 316
+K+W
Sbjct: 432 K--IKVW 436
Score = 270 (100.1 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 241 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 297
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 298 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 354
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 355 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 411
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 412 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 440
Score = 224 (83.9 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 322 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 371
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 372 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 427
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 428 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 485
Query: 185 D 185
D
Sbjct: 486 D 486
Score = 200 (75.5 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 242 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 291
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 292 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 347
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 348 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 405
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 406 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 462
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 463 VFRLQFDEFQIISSSHDDTILIWD 486
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD ++ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 273
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 274 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 328
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 329 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 357
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 325 (119.5 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 72/257 (28%), Positives = 129/257 (50%)
Query: 66 LQKFTGHEQGVSDLVFS-SDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + +W V C+ +L GHT + + +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+ +IV+G+ ++R+WD++ K L+ L H + ++DF+ G+ + + S D ++W
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ V ++FSP+GK++ D+T++LW+ + GK++ +TGH+
Sbjct: 133 DVRRKGCIFKY-KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP 191
Query: 245 KYCISSTFSVTNGKYIV-SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
+ F + +Y++ SGS D + W+L+ VV +E PV + +P +
Sbjct: 192 VNVVE--FHPS--EYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 247
Query: 304 SGALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 248 GGFQDSLR-VYGWEPER 263
Score = 253 (94.1 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 61/212 (28%), Positives = 96/212 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH I S++ S L+ + S L+ GH+ +
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQS--------GSIRVWDLEAAKILRTLLGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWDV C+ HT V C+ F+P + S A D
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + HS PV V+F+ ++ + S D R WD H + + I+
Sbjct: 170 TVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVV-SCIE 228
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
+E PV + F+P+G L G ++LR++ +
Sbjct: 229 EEATPVRCILFNPDG-CCLYGGFQDSLRVYGW 259
Score = 211 (79.3 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 52/182 (28%), Positives = 82/182 (45%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + K+ H Q
Sbjct: 97 ILRTLLGHKANICSLDFHPYGSFVASGSLD--------TDIKLWDVRRKGCIFKYKSHTQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GH+ V V F+P ++ SG+
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGS 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D T+R WD++ + + + PV + FN DG + D L R++ C
Sbjct: 209 SDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERCFDV 267
Query: 195 LI 196
++
Sbjct: 268 VV 269
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 325 (119.5 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 78/247 (31%), Positives = 132/247 (53%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D +VS D TI++WD +C + L GHT V C+ ++ + +I+
Sbjct: 221 NSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYD--NRVII 276
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH- 190
SG+ D TVR+WDV+TG+C+K L H + V + F +G M VT S D +WD +
Sbjct: 277 SGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF-ANGIM-VTCSKDRSIAVWDMVSPRD 334
Query: 191 -CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + ++I+ + D T+++W+ T + ++T GH C+
Sbjct: 335 ITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ 392
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
G+ +VSGS D+ + LW++ S ++ LEGH + V + E I SGA D
Sbjct: 393 Y-----RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD--EKRIVSGAYDG 445
Query: 310 DRTVKIW 316
+K+W
Sbjct: 446 K--IKVW 450
Score = 273 (101.2 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 67/210 (31%), Positives = 113/210 (53%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V L D+R ++S S D T+R+WDV T C+KTLI H V + F + +
Sbjct: 259 SGHTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF--ANGI 314
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + + +VL H V VDF D IV++S D ++W
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSM 372
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
T ++TL ++ +++ G+ ++ G+ DNT+RLW+ +G L+ GH
Sbjct: 373 DTLEFVRTLAGHRRG-IACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR 429
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 430 CIR--F---DEKRIVSGAYDGKIKVWDLQA 454
Score = 218 (81.8 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 59/184 (32%), Positives = 89/184 (48%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
R T+ + L GH A++ V F D R + S+S D+ ++
Sbjct: 333 RDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEF--------VRTLA 382
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH +G++ L + R +VS S D TIRLWD+ + CL+ L GH V C+ F+ + I
Sbjct: 383 GHRRGIACLQYRG--RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--I 438
Query: 131 VSGAFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
VSGA+D +++WD++ CL L H+ V + F D IV+SS+D
Sbjct: 439 VSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTI 496
Query: 182 RIWD 185
IWD
Sbjct: 497 LIWD 500
Score = 136 (52.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D IV+ D +IWD C + ++ V +++ + + I+ G+ D T+R+W
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSR-ILSGHTGSVLCLQY--DNRVIISGSSDATVRVW 287
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ TG+ +KT H + + F+ NG +V+ S+D + +W++ S + + + L
Sbjct: 288 DVETGECIKTLIHHCEA--VLHLRFA--NG-IMVTCSKDRSIAVWDMVSPRDITIRRVLV 342
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWTQE 319
GH ++V I+ ASG DRT+K+W+ +
Sbjct: 343 GHR-AAVNVVDFDDRYIVSASG----DRTIKVWSMD 373
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 325 (119.5 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 78/247 (31%), Positives = 132/247 (53%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D +VS D TI++WD +C + L GHT V C+ ++ + +I+
Sbjct: 221 NSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYD--NRVII 276
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH- 190
SG+ D TVR+WDV+TG+C+K L H + V + F +G M VT S D +WD +
Sbjct: 277 SGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF-ANGIM-VTCSKDRSIAVWDMVSPRD 334
Query: 191 -CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + ++I+ + D T+++W+ T + ++T GH C+
Sbjct: 335 ITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ 392
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
G+ +VSGS D+ + LW++ S ++ LEGH + V + E I SGA D
Sbjct: 393 Y-----RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD--EKRIVSGAYDG 445
Query: 310 DRTVKIW 316
+K+W
Sbjct: 446 K--IKVW 450
Score = 273 (101.2 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 67/210 (31%), Positives = 113/210 (53%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH V L D+R ++S S D T+R+WDV T C+KTLI H V + F + +
Sbjct: 259 SGHTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRF--ANGI 314
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + + +VL H V VDF D IV++S D ++W
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSM 372
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
T ++TL ++ +++ G+ ++ G+ DNT+RLW+ +G L+ GH
Sbjct: 373 DTLEFVRTLAGHRRG-IACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR 429
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 430 CIR--F---DEKRIVSGAYDGKIKVWDLQA 454
Score = 218 (81.8 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 59/184 (32%), Positives = 89/184 (48%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
R T+ + L GH A++ V F D R + S+S D+ ++
Sbjct: 333 RDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEF--------VRTLA 382
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH +G++ L + R +VS S D TIRLWD+ + CL+ L GH V C+ F+ + I
Sbjct: 383 GHRRGIACLQYRG--RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--I 438
Query: 131 VSGAFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
VSGA+D +++WD++ CL L H+ V + F D IV+SS+D
Sbjct: 439 VSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTI 496
Query: 182 RIWD 185
IWD
Sbjct: 497 LIWD 500
Score = 136 (52.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D IV+ D +IWD C + ++ V +++ + + I+ G+ D T+R+W
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSR-ILSGHTGSVLCLQY--DNRVIISGSSDATVRVW 287
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ TG+ +KT H + + F+ NG +V+ S+D + +W++ S + + + L
Sbjct: 288 DVETGECIKTLIHHCEA--VLHLRFA--NG-IMVTCSKDRSIAVWDMVSPRDITIRRVLV 342
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWTQE 319
GH ++V I+ ASG DRT+K+W+ +
Sbjct: 343 GHR-AAVNVVDFDDRYIVSASG----DRTIKVWSMD 373
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 309 (113.8 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 74/234 (31%), Positives = 124/234 (52%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
L S S + +L + KT +GH+ V+ +F+P S ++S + D T R+W ++T
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETM 711
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN-PPVSFV 206
L H+ PV V F+ G T+S+D R+W +T H I + + V
Sbjct: 712 SNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLW--TTNHISPLRIFTGHLSDCNTV 769
Query: 207 KFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266
+F PN ++ G+ D + RLW TGK ++ + GH Y ++ FS +G+ + + ED
Sbjct: 770 RFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVA--FS-PDGRLLATAGED 826
Query: 267 SCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
+ V LW+L + K V+K++GHT V S+ +I+ASG+ +D TV++W +K
Sbjct: 827 TSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGS--SDCTVRLWDVKK 878
Score = 281 (104.0 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 67/227 (29%), Positives = 108/227 (47%)
Query: 2 SSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXX 61
SS L+ + + +T GH + FS D + L S S D
Sbjct: 658 SSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSED--------TTARLWSME 709
Query: 62 XXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCV 121
L + GH V D+ FS + +AS D+T RLW + L+ GH + V
Sbjct: 710 TMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTV 769
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
F+P N + +G+ D++ R+W+++TGKC+++ H P+ V F+ DG ++ T+ D
Sbjct: 770 RFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSV 829
Query: 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+WD STG +K + D V + FS +G + G+ D T+RLW+
Sbjct: 830 ILWDLSTGKKVKKM-DGHTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
Score = 216 (81.1 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 57/192 (29%), Positives = 89/192 (46%)
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+N + SG+ + ++ + K HS PV F+ D +++ S D R+W
Sbjct: 649 NNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSM 708
Query: 187 STGHCMKTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
T M L+ N PV V FSP G + + D T RLW + L+ +TGH +
Sbjct: 709 ET---MSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSD 765
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
C + F N Y+ +GS D LWE+Q+ K V+ GH P+ +VA P ++A+
Sbjct: 766 --CNTVRFH-PNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLAT 822
Query: 305 GALDNDRTVKIW 316
D +V +W
Sbjct: 823 AG--EDTSVILW 832
Score = 174 (66.3 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 40/125 (32%), Positives = 65/125 (52%)
Query: 21 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV 80
GHL ++V+F + LA+ S DK ++ F GH + +
Sbjct: 761 GHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKC--------VRIFMGHRAPIYTVA 812
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140
FS D R L +A +D ++ LWD+ T +K + GHT V+ ++F+ +++ SG+ D TVR
Sbjct: 813 FSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVR 872
Query: 141 IWDVK 145
+WDVK
Sbjct: 873 LWDVK 877
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 36/106 (33%), Positives = 47/106 (44%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D+S + T + GH I +V FS DGRLLA++ D
Sbjct: 782 SNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGED--------TSVILWD 833
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA 105
++K GH + V L FS D L S S D T+RLWDV A
Sbjct: 834 LSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKA 879
Score = 49 (22.3 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 107 CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK 148
C T+ + + + + ++ G D +V+IW++K K
Sbjct: 550 CFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIWNLKEMK 591
Score = 46 (21.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 6/29 (20%), Positives = 17/29 (58%)
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDV 102
QG++ S D++ + D ++++W++
Sbjct: 559 QGLNTTDISKDAQLVAGGFSDSSVKIWNL 587
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 59/171 (34%), Positives = 83/171 (48%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ VS + + +VSAS DKTI++W+V T C+KT GH +V V N +I
Sbjct: 22 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 81
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S + D+TVR+W V T +C L H V + + + SSY + + GH
Sbjct: 82 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE------SSYSSISEATGSEVGH 135
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
+N V V F GKFIL D TLR+W+Y + +KT H
Sbjct: 136 --------DNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 177
Score = 216 (81.1 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 43/123 (34%), Positives = 69/123 (56%)
Query: 92 SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK 151
S D TI+LWD C++T+ GH + V V P + IVS + D+T+++W+V+TG C+K
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN 211
H + V V N+DGT+I + S D R+W +T C L + E+ V + ++P
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-VECISWAPE 119
Query: 212 GKF 214
+
Sbjct: 120 SSY 122
Score = 181 (68.8 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 47/162 (29%), Positives = 82/162 (50%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V C+++ P
Sbjct: 59 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 118
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+S+ + E TG +V H + V V F+ G I++ + D R+WD
Sbjct: 119 ESSY---SSISEA-------TGS--EV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWD 164
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
CMKTL E+ V+ + F +++ G++D T+++W
Sbjct: 165 YKNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 174 (66.3 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 27/75 (36%), Positives = 51/75 (68%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+ + +
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 131 VSGAFDETVRIWDVK 145
V+G+ D+TV++W+ +
Sbjct: 194 VTGSVDQTVKVWECR 208
Score = 159 (61.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 112 IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171
+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 133 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 192
Query: 172 IVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 193 VVTGSVDQTVKVWE 206
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/96 (33%), Positives = 55/96 (57%)
Query: 221 DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV 280
D T++LW++ + ++T GH ++ +SS + NG +IVS S D + +WE+Q+ V
Sbjct: 3 DMTIKLWDFQGFECIRTMHGHDHN---VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV 59
Query: 281 QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+ GH + V V + +IAS ND+TV++W
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIAS--CSNDQTVRVW 93
Score = 149 (57.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 136 DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
D T+++WD + +C++ + H V++V +G IV++S D ++W+ TG+C+KT
Sbjct: 3 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 62
Query: 196 IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 63 TGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 115
Score = 135 (52.6 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D +++ F+ + +T++GH +SSV +G + S+S DK
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC-- 58
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
++ FTGH + V + + D + S S+D+T+R+W V T C L H + V
Sbjct: 59 ------VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 112
Query: 120 CVNFNPQSN 128
C+++ P+S+
Sbjct: 113 CISWAPESS 121
Score = 116 (45.9 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 206 VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE 265
V F GKFIL D TLR+W+Y + +KT H + + S F T Y+V+GS
Sbjct: 142 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVTGSV 198
Query: 266 DSCVYLWE 273
D V +WE
Sbjct: 199 DQTVKVWE 206
Score = 102 (41.0 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH N + + GK+I+S ++D + +W+ ++++ ++ L H V S+ H T
Sbjct: 134 GHDN---WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 190
Query: 300 NIIASGALDNDRTVKIW 316
+ +G++D +TVK+W
Sbjct: 191 PYVVTGSVD--QTVKVW 205
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 321 (118.1 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 226 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 281
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 282 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 339
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 340 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 397
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 398 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 450
Query: 310 DRTVKIW 316
+K+W
Sbjct: 451 K--IKVW 455
Score = 270 (100.1 bits), Expect = 8.8e-23, P = 8.8e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 260 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 316
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 317 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 373
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 374 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 430
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 431 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 459
Score = 224 (83.9 bits), Expect = 9.1e-18, P = 9.1e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 341 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 390
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 391 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 446
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 447 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 504
Query: 185 D 185
D
Sbjct: 505 D 505
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 261 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 310
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 311 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 366
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 367 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 424
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 425 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 481
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 482 VFRLQFDEFQIISSSHDDTILIWD 505
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD ++ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 236 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 292
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 293 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 347
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 348 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 376
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 321 (118.1 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 227 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 282
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 283 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 340
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 341 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 398
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 399 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 451
Query: 310 DRTVKIW 316
+K+W
Sbjct: 452 K--IKVW 456
Score = 270 (100.1 bits), Expect = 8.9e-23, P = 8.9e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 261 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 317
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 318 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 374
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 375 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 431
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 432 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 460
Score = 224 (83.9 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 342 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 391
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 392 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 447
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 448 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 505
Query: 185 D 185
D
Sbjct: 506 D 506
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 262 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 311
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 312 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 367
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 368 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 425
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 426 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 482
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 483 VFRLQFDEFQIISSSHDDTILIWD 506
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD ++ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 237 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 293
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 294 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 348
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 349 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 377
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 323 (118.8 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 76/235 (32%), Positives = 128/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V G+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 480
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 531
Score = 262 (97.3 bits), Expect = 9.5e-22, P = 9.5e-22
Identities = 66/210 (31%), Positives = 109/210 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV L TLI H V + FN + M
Sbjct: 340 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 453
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 454 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 510
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+L +
Sbjct: 511 CIR--F---DNKRIVSGAYDGKIKVWDLMA 535
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 59/181 (32%), Positives = 88/181 (48%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 417 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 466
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 467 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 522
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ CL+ L HS V + F D IV+SS+D IW
Sbjct: 523 AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 580
Query: 185 D 185
D
Sbjct: 581 D 581
Score = 197 (74.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 55/209 (26%), Positives = 103/209 (49%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 382 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 437
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 495
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 496 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 552
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWE 273
+ V ++ IVS S D + +W+
Sbjct: 553 EHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T +TLNGH R I+ +++ D RL+ S S+D
Sbjct: 443 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGAC-- 498
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--------PTAT-CLKT 110
L+ GHE+ V + F D++ +VS + D I++WD+ P T CL+T
Sbjct: 499 ------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 550
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159
L+ H+ VF + F+ IVS + D+T+ IWD L AH++P
Sbjct: 551 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWDF-----LNDPAAHAEP 592
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 323 (118.8 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 76/235 (32%), Positives = 128/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V G+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 480
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 531
Score = 262 (97.3 bits), Expect = 9.5e-22, P = 9.5e-22
Identities = 66/210 (31%), Positives = 109/210 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV L TLI H V + FN + M
Sbjct: 340 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 453
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 454 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 510
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+L +
Sbjct: 511 CIR--F---DNKRIVSGAYDGKIKVWDLMA 535
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 59/181 (32%), Positives = 88/181 (48%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 417 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 466
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 467 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 522
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ CL+ L HS V + F D IV+SS+D IW
Sbjct: 523 AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 580
Query: 185 D 185
D
Sbjct: 581 D 581
Score = 197 (74.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 55/209 (26%), Positives = 103/209 (49%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 382 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 437
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 495
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 496 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 552
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWE 273
+ V ++ IVS S D + +W+
Sbjct: 553 EHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/177 (28%), Positives = 82/177 (46%)
Query: 2 SSDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D++++ + T +TLNGH R I+ +++ D RL+ S S+D
Sbjct: 443 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGAC-- 498
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--------PTAT-CLKT 110
L+ GHE+ V + F D++ +VS + D I++WD+ P T CL+T
Sbjct: 499 ------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 550
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167
L+ H+ VF + F+ IVS + D+T+ IWD P S T +R
Sbjct: 551 LVEHSGRVFRLQFD--EFQIVSSSHDDTILIWDFLNDPATHAEPPRSPSRTYTYISR 605
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 320 (117.7 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 78/247 (31%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 212 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 267
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD AS T
Sbjct: 268 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASPTD 325
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 326 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 383
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 384 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 436
Query: 310 DRTVKIW 316
+K+W
Sbjct: 437 K--IKVW 441
Score = 268 (99.4 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 246 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 302
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 303 -NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 359
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 360 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 416
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 417 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 445
Score = 224 (83.9 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 327 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 376
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 377 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 432
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 433 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 490
Query: 185 D 185
D
Sbjct: 491 D 491
Score = 198 (74.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 62/264 (23%), Positives = 119/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 247 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 296
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ PT T + L+GH V V+F+ + IVS
Sbjct: 297 LHLRFSNG--LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSA 352
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 353 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 410
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 411 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 467
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 468 VFRLQFDEFQIISSSHDDTILIWD 491
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD ++ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 222 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 278
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 279 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASPTDITLRRVLV 333
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 334 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 362
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 321 (118.1 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 239 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 294
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 295 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 352
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 410
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 411 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 463
Query: 310 DRTVKIW 316
+K+W
Sbjct: 464 K--IKVW 468
Score = 270 (100.1 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 273 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 329
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 330 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 386
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 387 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 444 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 472
Score = 224 (83.9 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 354 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 403
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 404 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 459
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 460 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 517
Query: 185 D 185
D
Sbjct: 518 D 518
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 274 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 323
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 324 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 379
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 380 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 437
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 438 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 494
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 495 VFRLQFDEFQIISSSHDDTILIWD 518
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD ++ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 305
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 306 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 360
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 361 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 389
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 321 (118.1 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 76/247 (30%), Positives = 135/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 239 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 294
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV TG+ L L H++ V + F+ +G M VT S D +WD ++T
Sbjct: 295 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASATD 352
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 353 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 410
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 411 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 463
Query: 310 DRTVKIW 316
+K+W
Sbjct: 464 K--IKVW 468
Score = 270 (100.1 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV T L TLI H V + F+
Sbjct: 273 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS- 329
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 330 -NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 386
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 387 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 444 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 472
Score = 224 (83.9 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 354 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 403
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 404 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 459
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 460 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 517
Query: 185 D 185
D
Sbjct: 518 D 518
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/264 (23%), Positives = 120/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 274 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEV--------LNTLIHHNEAV 323
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ +AT + + L+GH V V+F+ + IVS
Sbjct: 324 LHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSA 379
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 380 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 437
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 438 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 494
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 495 VFRLQFDEFQIISSSHDDTILIWD 518
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD ++ C+K L S + + + I+ G+ D+T+R+W
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 305
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 306 DVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASATDITLRRVLV 360
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 361 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 389
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 322 (118.4 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 76/235 (32%), Positives = 128/235 (54%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D + +VS D TI++WD T C + L GHT V C+ ++ + +I++G+ D TVR+WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVRVWD 369
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TGHCMKTLIDDENP 201
V G+ L L H + V + FN +G M+VT S D +WD AS T ++ ++
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
V+ V F + K+I+ + D T+++WN ST + ++T GH C+ + +V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-----RDRLVV 480
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D +K+W
Sbjct: 481 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVW 531
Score = 261 (96.9 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 66/208 (31%), Positives = 108/208 (51%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
TGH V L D R +++ S D T+R+WDV L TLI H V + FN + M
Sbjct: 340 TGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 130 IVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+V+ + D ++ +WD+ + + +VL H V VDF D IV++S D ++W+
Sbjct: 396 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 453
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 454 STCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 510
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWEL 274
CI F + K IVSG+ D + +W+L
Sbjct: 511 CIR--F---DNKRIVSGAYDGKIKVWDL 533
Score = 222 (83.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 60/181 (33%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 417 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--------VRTLNGHK 466
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 467 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 522
Query: 134 AFDETVRIWDV--------KTGK-CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD+ G CL+ L HS V + F D IV+SS+D IW
Sbjct: 523 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 580
Query: 185 D 185
D
Sbjct: 581 D 581
Score = 197 (74.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSN 128
H + V L F++ +V+ S D++I +WD+ PT T + L+GH V V+F+ +
Sbjct: 382 HCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-- 437
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
IVS + D T+++W+ T + ++ L H + + + RD ++V+ S D R+WD
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIEC 495
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
G C++ L E V ++F + K I+ G D +++W+ + G + +
Sbjct: 496 GACLRVLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552
Query: 249 SSTFSVTNGKY----IVSGSEDSCVYLWELQSRKVVQ 281
+ V ++ IVS S D + +W+ + Q
Sbjct: 553 EHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 589
>TAIR|locus:2181733 [details] [associations]
symbol:AT5G02430 "AT5G02430" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AL162971 HOGENOM:HOG000239143
ProtClustDB:CLSN2683085 IPI:IPI00534660 PIR:T48264
RefSeq:NP_195863.1 UniGene:At.54687 ProteinModelPortal:Q9LZ59
SMR:Q9LZ59 PaxDb:Q9LZ59 PRIDE:Q9LZ59 EnsemblPlants:AT5G02430.1
GeneID:831780 KEGG:ath:AT5G02430 TAIR:At5g02430 InParanoid:Q9LZ59
OMA:RRENANS PhylomeDB:Q9LZ59 Genevestigator:Q9LZ59 Uniprot:Q9LZ59
Length = 905
Score = 296 (109.3 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 74/214 (34%), Positives = 123/214 (57%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-QS 127
FTGH V DL +S S+ L+S+S DKT+RLWD+ T +CLK L H +YV CV FNP
Sbjct: 515 FTGHLDDVLDLSWSR-SQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLDE 572
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+ +SG+ D +RIW++ + ++ + VTAV + DG S +G CR++ A
Sbjct: 573 DYFISGSLDAKIRIWNISNRQVVEWNDL-KEMVTAVCYTPDGQAAFVGSINGHCRLYSAE 631
Query: 188 TGHCMKT-LIDDENPP------VSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTYT 239
+T ID +N ++ +FSP N +LV + D+ +R+ + + ++++ +
Sbjct: 632 DCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSADSRIRVLDGT--ELVQKFR 689
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
G N ++++++V + K+IV SEDS VY+W+
Sbjct: 690 GFKNMNSQMTASYTV-DAKHIVCASEDSQVYVWK 722
Score = 196 (74.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 58/215 (26%), Positives = 106/215 (49%)
Query: 113 GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-DGTM 171
GH + V ++++ +S +++S + D+TVR+WD++T CLK+ AH+D VT V FN D
Sbjct: 517 GHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDIETQSCLKLF-AHNDYVTCVQFNPLDEDY 574
Query: 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231
++ S D RIW+ S ++ +D V+ V ++P+G+ VG+++ RL++
Sbjct: 575 FISGSLDAKIRIWNISNRQVVEW--NDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSAED 632
Query: 232 GKILKTYT------GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
K+ +T +K + FS N ++ S DS + + L ++VQK G
Sbjct: 633 CKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSADSRIRV--LDGTELVQKFRG 690
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
+ + + T + D V +W E+
Sbjct: 691 FKNMNSQMTASYTVDAKHIVCASEDSQVYVWKHEE 725
Score = 76 (31.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102
Q+ H+ G+ + FS DS L SA +D I +W+V
Sbjct: 405 QEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEV 440
Score = 56 (24.8 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 3 SDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSAD 44
S +S + + Q + H I ++KFS D LLAS+ D
Sbjct: 391 SGKSHKDLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGED 432
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 319 (117.4 bits), Expect = 4.3e-28, P = 4.3e-28
Identities = 89/308 (28%), Positives = 143/308 (46%)
Query: 18 TLNGHLRAISSVKFSH-DGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
T GH + IS ++F G LL S S D L+ F GH + +
Sbjct: 261 TWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSL-------LRTFQGHARPI 313
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF--NPQS-NMIVSG 133
DL FS D R +S S DKTI+LWD CL CV F +P N ++G
Sbjct: 314 RDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCF-NSDRLTNCVKFQVDPDKPNEFLAG 372
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
D+ + +D+++ ++ H + ++ F +G VT+S D R W+ T +K
Sbjct: 373 TADKRILQFDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIK 432
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN----YSTGKILKTYTGHTNSKYCIS 249
+ D + V PNGK I +LDN + +++ Y K K + G++ S Y +
Sbjct: 433 FVADIAMHSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNK-KKVFKGYSCSGYSLE 491
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENI-IASGALD 308
FS +G+++ SG W+ ++ K++ KL H+ PV S+A HP E +A+ ++
Sbjct: 492 VGFS-PDGRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIV 550
Query: 309 NDRTVKIW 316
D ++K W
Sbjct: 551 -DGSIKYW 557
Score = 135 (52.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 60/273 (21%), Positives = 99/273 (36%)
Query: 8 ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQ 67
E + +L +T GH R I + FS DGR S+S DK L
Sbjct: 295 EVYHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLT 354
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
+ V + FL +D K I +D+ + ++ H + + F
Sbjct: 355 NCVKFQ--VDP---DKPNEFLAGTAD-KRILQFDIRSPDIVQAYDHHLGGINSITFLENG 408
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKV---LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
V+ + D ++R W+ T +K + HS P A+ N G I S D ++
Sbjct: 409 KRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPRVALRPN--GKSIACQSLDNCIYVY 466
Query: 185 DASTGHCM---KTLIDDENPPVSF-VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240
A + K S V FSP+G+F+ G W++ T K++
Sbjct: 467 SAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVFSGDSSGNACFWDWKTCKLMAKLPA 526
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
H+ ++ T+ K S D + W+
Sbjct: 527 HSGPVQSMAFHPQETS-KVATSSIVDGSIKYWD 558
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 91/320 (28%), Positives = 148/320 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGR-LLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
L TL GH ++S+ + + +L S S DK ++ TGH
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQ---RRLTGHS 63
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
VSD S DS + +SAS DKTIRLWD+ C +GHT+ V V+ +P + +VSG
Sbjct: 64 HFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSG 123
Query: 134 AFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDASTG 189
+ D+T++IW++ G C + HSD V+ V F N D V++ +D ++WD T
Sbjct: 124 SRDKTIKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLET- 181
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++T VS V SP+G G D TL LW+ + L + N +
Sbjct: 182 FSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVF 241
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL--------EGHTDP-VISVASHPTEN 300
S +Y + + S + +++L++++ V +L + ++P IS+ P
Sbjct: 242 SP-----NRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQ 296
Query: 301 IIASGALDNDRTVKIWTQEK 320
+ SG DN +++W K
Sbjct: 297 TLFSGWTDN--LIRVWQVTK 314
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 319 (117.4 bits), Expect = 5.6e-28, P = 5.6e-28
Identities = 81/318 (25%), Positives = 143/318 (44%)
Query: 8 ESFRPYTLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
++F P L GH + ++++++ G LL S+ D +
Sbjct: 289 DTFVPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRC-------I 341
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
Q + GH Q V D+ FS+D R +S D+ RLWD T L + + +C+ FNP
Sbjct: 342 QTYMGHSQAVRDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFT-NGKIPYCIKFNPD 400
Query: 127 SN---MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ + G D+ + WD+K+ + ++ H V + F D VTSS D R+
Sbjct: 401 DDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRV 460
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN----YSTGKILKTYT 239
WD +K + D + V P GK+ +LDN + +++ + K K +
Sbjct: 461 WDWGIPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNK-KKRFL 519
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH S Y FS +GK+I SG + W+ ++ K+++ + H + I + P E
Sbjct: 520 GHNVSGYACQLGFS-PDGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAPLE 578
Query: 300 -NIIASGALDNDRTVKIW 316
+ +A+ + +N+ +K+W
Sbjct: 579 PSKVATCSWNNE--IKLW 594
Score = 125 (49.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 37/170 (21%), Positives = 77/170 (45%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF-CVNFN 124
+Q++ H V+ + F D+R V++SDDK++R+WD +K + + + V +
Sbjct: 427 VQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPVVIKYISDPSMHSMPAVALH 486
Query: 125 PQSNMIVSGAFDETVRIWDVKT----GKCLKVLPAH-SDPVTAVDFNRDGTMIVTSSYDG 179
P+ + + D + I+ + K + L + S + F+ DG I + G
Sbjct: 487 PKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGHNVSGYACQLGFSPDGKFIYSGDSTG 546
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWN 228
WD T +KT+ N + ++++P + + +N ++LW+
Sbjct: 547 KAFFWDWKTSKIIKTINAHNNVCIG-IEWAPLEPSKVATCSWNNEIKLWD 595
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 316 (116.3 bits), Expect = 5.6e-28, P = 5.6e-28
Identities = 71/260 (27%), Positives = 117/260 (45%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL +TL GH + ++ F L S + GH
Sbjct: 249 TLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHS 308
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V+ + + RFL + D + RLWD+ + GH+ V ++F+P ++ +G
Sbjct: 309 MRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTG 368
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
D R+WD++TG+C+ L H + +++F+ +G + T S D C++WD C+
Sbjct: 369 GLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIY 428
Query: 194 TLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
T+ +N VS VKF PN G ++L G DNT ++W + LKT GH + +
Sbjct: 429 TIPAHQNL-VSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLS- 486
Query: 253 SVTNGKYIVSGSEDSCVYLW 272
+G+ I + S D LW
Sbjct: 487 --PDGQLIATCSYDRTFKLW 504
Score = 315 (115.9 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 78/258 (30%), Positives = 133/258 (51%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM- 129
G ++ +S FS +S+ LV+AS +LW VP T ++TL GH V ++F+PQ+ +
Sbjct: 214 GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLT 273
Query: 130 -------IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ S A D +V++W + + + + + HS V V ++ G + T+ YD R
Sbjct: 274 LEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWR 333
Query: 183 IWDASTGHCMKTLIDDE--NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240
+WD + ++ E + V + F P+G G LD+ R+W+ TG+ + G
Sbjct: 334 LWDLEV---QEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEG 390
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE- 299
H Y I+ FS NG ++ +GS D+ +W+L+ R+ + + H + V SV P +
Sbjct: 391 HIKEIYSIN--FS-PNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDG 447
Query: 300 NIIASGALDNDRTVKIWT 317
+ + +GA DN T KIWT
Sbjct: 448 HYLLTGAYDN--TAKIWT 463
Score = 283 (104.7 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 67/249 (26%), Positives = 119/249 (47%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H Q L SD + S + D +++LW + + + + GH+ V V ++P +
Sbjct: 267 HPQATLTLE-ESDVN-MASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLG 324
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
+ +D + R+WD++ + + HS V + F+ DG++ T D R+WD TG C
Sbjct: 325 TTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRC 384
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
+ L + + + FSPNG + G+ DN ++W+ + + T H N +SS
Sbjct: 385 VMFL-EGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQN---LVSSV 440
Query: 252 -FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F +G Y+++G+ D+ +W ++ L GH V+ V P +IA+ + D
Sbjct: 441 KFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYD-- 498
Query: 311 RTVKIWTQE 319
RT K+W E
Sbjct: 499 RTFKLWMSE 507
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 320 (117.7 bits), Expect = 6.2e-28, P = 6.2e-28
Identities = 71/257 (27%), Positives = 127/257 (49%)
Query: 66 LQKFTGHEQGVSDLVFS-SDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + +W V C+ +L GHT + + +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+ +IV+G+ ++R+WD++ K L+ L H + ++DF+ G+ + + S D ++W
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ V ++FSP+GK++ D+T++LW+ + GK++ +TGH
Sbjct: 133 DVRRKGCIFKY-KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 191
Query: 245 KYCISSTFSVTNGKYIV-SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
+ S+ +Y++ SGS + W+L+ VV +E PV + +P +
Sbjct: 192 VNVVEFHPSI---EYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 248
Query: 304 SGALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 249 GGFQDSLR-VYGWEPER 264
Score = 233 (87.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 59/213 (27%), Positives = 94/213 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH I S++ S L+ + S L+ GH+ +
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQS--------GSIRVWDLEAAKILRTLLGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWDV C+ HT V C+ F+P + S A D
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC-RIWDASTGHCMKTLI 196
TV++WD+ GK + H PV V+F+ ++ S + R WD H + + I
Sbjct: 170 TVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV-SCI 228
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
++E PV + F+P+G L G ++LR++ +
Sbjct: 229 EEEATPVRCILFNPDG-CCLYGGFQDSLRVYGW 260
Score = 191 (72.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 51/183 (27%), Positives = 80/183 (43%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + K+ H Q
Sbjct: 97 ILRTLLGHKANICSLDFHPYGSFVASGSLD--------TDIKLWDVRRKGCIFKYKSHTQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSG 133
V L FS D ++L SA+DD T++LWD+ + GH V V F+P ++ SG
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASG 208
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ T+R WD++ + + + PV + FN DG + D L R++ C
Sbjct: 209 SSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERCFD 267
Query: 194 TLI 196
++
Sbjct: 268 VVV 270
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 320 (117.7 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 80/246 (32%), Positives = 120/246 (48%)
Query: 2 SSDQSL--ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
SSDQS+ R YTL L GH + S FS G + SSSAD
Sbjct: 398 SSDQSIGPNGRRSYTL---LLGHSGPVYSATFSPPGDFVLSSSAD--------TTIRLWS 446
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L + GH V D FS + S S D+T R+W + L+ + GH + V
Sbjct: 447 TKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVD 506
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
CV ++P N I +G+ D+TVR+WDV+TG+C+++ H V ++ + DG + + DG
Sbjct: 507 CVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDG 566
Query: 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY-STGKILKTY 238
+WD ST C+ L+ N V + +S G + G+ D T++LW+ S+ K+ K
Sbjct: 567 TIMMWDLSTARCITPLMG-HNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAE 625
Query: 239 TGHTNS 244
+ NS
Sbjct: 626 EKNGNS 631
Score = 302 (111.4 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 72/233 (30%), Positives = 114/233 (48%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V FS F++S+S D TIRLW L GH V+ F+P +
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S + D T RIW + + L+++ H V V ++ + I T S D R+WD TG
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGE 535
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C++ I + +S SP+G+++ G D T+ +W+ ST + + GH NS C+ S
Sbjct: 536 CVRIFIGHRSMVLSLA-MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGH-NS--CVWS 591
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE---GHTDPVISVASHPTEN 300
G + SGS D V LW++ S + K E G+++ + S+ + PT++
Sbjct: 592 LSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKS 644
Score = 287 (106.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 61/206 (29%), Positives = 107/206 (51%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170
L+GH+ V+ F+P + ++S + D T+R+W K L H+ PV F+ G
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
+ S+D RIW ++ + + V V++ PN +I G+ D T+RLW+
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSD-VDCVQWHPNCNYIATGSSDKTVRLWDVQ 532
Query: 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV 290
TG+ ++ + GH + +S S +G+Y+ SG ED + +W+L + + + L GH V
Sbjct: 533 TGECVRIFIGHRSM--VLSLAMS-PDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCV 589
Query: 291 ISVASHPTENIIASGALDNDRTVKIW 316
S++ +++ASG+ D TVK+W
Sbjct: 590 WSLSYSGEGSLLASGSADC--TVKLW 613
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 49/178 (27%), Positives = 87/178 (48%)
Query: 6 SLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXX 65
S++ +P + + GHL + V++ + +A+ S+DK
Sbjct: 488 SMDRIQPLRI---MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGEC-------- 536
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
++ F GH V L S D R++ S +D TI +WD+ TA C+ L+GH + V+ ++++
Sbjct: 537 VRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSG 596
Query: 126 QSNMIVSGAFDETVRIWDV-----------KTG-----KCLKVLPAHSDPVTAVDFNR 167
+ +++ SG+ D TV++WDV K G + L+ P S PV A+ F+R
Sbjct: 597 EGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFSR 654
Score = 44 (20.5 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102
F G++ S D + D +I++WD+
Sbjct: 348 FVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDM 381
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 316 (116.3 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 75/247 (30%), Positives = 134/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 224 NSKGVYCLQYDDDK--IISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDER--VIV 279
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTG 189
+G+ D TVR+WDV +G+ L L H++ V + F +G M VT S D +WD ++T
Sbjct: 280 TGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC-NGLM-VTCSKDRSIAVWDMASATD 337
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 338 ISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 395
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 396 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 448
Query: 310 DRTVKIW 316
+K+W
Sbjct: 449 K--IKVW 453
Score = 263 (97.6 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 67/214 (31%), Positives = 111/214 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV + L TLI H V + F
Sbjct: 258 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC- 314
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 315 -NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 371
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 372 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 429 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 457
Score = 220 (82.5 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 57/181 (31%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 339 SLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 388
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 389 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 444
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 445 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 502
Query: 185 D 185
D
Sbjct: 503 D 503
Score = 142 (55.0 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 42/154 (27%), Positives = 77/154 (50%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD + C+K L S + + + I+ G+ D+T+R+W
Sbjct: 234 DDDKIISGLRDNSIKIWDKQSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 290
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ S+G++L T H + + F NG +V+ S+D + +W++ S + + L
Sbjct: 291 DVSSGEVLNTLIHHNEA--VLHLRFC--NG-LMVTCSKDRSIAVWDMASATDISLRRVLV 345
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 346 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 374
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 84/295 (28%), Positives = 143/295 (48%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
+ F + + T++ A+ +V+++ DG S +DK L
Sbjct: 1 MPEFENFNVKTTIDCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLL--------L 52
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+ + GH V+D S DS ++VSAS DK+I WDV T ++ L H V CV FN
Sbjct: 53 KTYGGHADEVTDAAGSCDSSYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNED 112
Query: 127 SNMIVSGAFDETVRIWDVKTGKC--LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
S++ +SG D V WD++T + ++V+ D +T V N + I +S DG R +
Sbjct: 113 SSIAISGGRDNAVMCWDIRTRRLDPVQVMKEARDCITTVATNEN--RIYAASLDGCVRTY 170
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D G + D P++++ + + + ++ G D+ +RL + TG +L Y GH
Sbjct: 171 DIRVG---ELTCDKIGEPITYLAQTRDEQCLVAGCQDSVVRLLDCETGGLLSEYRGHRGD 227
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE--GHTDPVISVASHP 297
Y I ++N IV+GS D ++++L KV+Q++ + V S+A+HP
Sbjct: 228 DYHIECGI-LSNDAQIVTGSSDGDAFVYDLLDGKVLQRIRISDNGGVVHSLATHP 281
Score = 161 (61.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
+KT ID + V V+++ +G + L D ++LWN ++G +LKTY GH + ++
Sbjct: 9 VKTTIDCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADE---VTDA 65
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311
+ YIVS S D + W++ + V++L H V V + +I SG DN
Sbjct: 66 AGSCDSSYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDN-- 123
Query: 312 TVKIW 316
V W
Sbjct: 124 AVMCW 128
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 265 (98.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D T LWD+ T T GHT V ++ P
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ + VSGA D + ++WDV+ G C + H + A+ F +G T S D CR++D
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ T D ++ V FS +G+ +L G D +W+ GH N
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---DDGMAVATGSWDSFLKIW 339
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 60/229 (26%), Positives = 107/229 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + +DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + L H+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T V + +P+ + + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I++ NG +GS+D+ L++L++ + + H + + + S
Sbjct: 229 -INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Score = 221 (82.9 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D FTGH
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTT--------FTGHTG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L + D+R VS + D + +LWDV C +T GH + + + F P N +G+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L +H + +T+V F++ G +++ D C +WDA
Sbjct: 246 DDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ L++WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 195 (73.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 51/211 (24%), Positives = 97/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+TGHT + S + + VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFTGHTGD---VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + ++ P N A+G+ +D T +++
Sbjct: 225 HESDINAICFFPNGNAFATGS--DDATCRLF 253
Score = 61 (26.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQD 76
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 265 (98.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D T LWD+ T T GHT V ++ P
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ + VSGA D + ++WDV+ G C + H + A+ F +G T S D CR++D
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ T D ++ V FS +G+ +L G D +W+ GH N
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---DDGMAVATGSWDSFLKIW 339
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 60/229 (26%), Positives = 107/229 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + +DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + L H+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T V + +P+ + + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I++ NG +GS+D+ L++L++ + + H + + + S
Sbjct: 229 -INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Score = 221 (82.9 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D FTGH
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTT--------FTGHTG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L + D+R VS + D + +LWDV C +T GH + + + F P N +G+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L +H + +T+V F++ G +++ D C +WDA
Sbjct: 246 DDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ L++WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 195 (73.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 51/211 (24%), Positives = 97/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+TGHT + S + + VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFTGHTGD---VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + ++ P N A+G+ +D T +++
Sbjct: 225 HESDINAICFFPNGNAFATGS--DDATCRLF 253
Score = 61 (26.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQD 76
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 265 (98.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D T LWD+ T T GHT V ++ P
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ + VSGA D + ++WDV+ G C + H + A+ F +G T S D CR++D
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ T D ++ V FS +G+ +L G D +W+ GH N
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---DDGMAVATGSWDSFLKIW 339
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 60/229 (26%), Positives = 107/229 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + +DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + L H+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T V + +P+ + + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I++ NG +GS+D+ L++L++ + + H + + + S
Sbjct: 229 -INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Score = 221 (82.9 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D FTGH
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTT--------FTGHTG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L + D+R VS + D + +LWDV C +T GH + + + F P N +G+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L +H + +T+V F++ G +++ D C +WDA
Sbjct: 246 DDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ L++WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 195 (73.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 51/211 (24%), Positives = 97/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+TGHT + S + + VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFTGHTGD---VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + ++ P N A+G+ +D T +++
Sbjct: 225 HESDINAICFFPNGNAFATGS--DDATCRLF 253
Score = 61 (26.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQD 76
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 265 (98.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D T LWD+ T T GHT V ++ P
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ + VSGA D + ++WDV+ G C + H + A+ F +G T S D CR++D
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ T D ++ V FS +G+ +L G D +W+ GH N
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---DDGMAVATGSWDSFLKIW 339
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 60/229 (26%), Positives = 107/229 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + +DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + L H+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T V + +P+ + + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I++ NG +GS+D+ L++L++ + + H + + + S
Sbjct: 229 -INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Score = 221 (82.9 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D FTGH
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTT--------FTGHTG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L + D+R VS + D + +LWDV C +T GH + + + F P N +G+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L +H + +T+V F++ G +++ D C +WDA
Sbjct: 246 DDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ L++WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 195 (73.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 51/211 (24%), Positives = 97/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+TGHT + S + + VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFTGHTGD---VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + ++ P N A+G+ +D T +++
Sbjct: 225 HESDINAICFFPNGNAFATGS--DDATCRLF 253
Score = 61 (26.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQD 76
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 265 (98.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D T LWD+ T T GHT V ++ P
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ + VSGA D + ++WDV+ G C + H + A+ F +G T S D CR++D
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ T D ++ V FS +G+ +L G D +W+ GH N
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---DDGMAVATGSWDSFLKIW 339
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 60/229 (26%), Positives = 107/229 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + +DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + L H+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T V + +P+ + + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I++ NG +GS+D+ L++L++ + + H + + + S
Sbjct: 229 -INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Score = 221 (82.9 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D FTGH
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTT--------FTGHTG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L + D+R VS + D + +LWDV C +T GH + + + F P N +G+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L +H + +T+V F++ G +++ D C +WDA
Sbjct: 246 DDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ L++WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 195 (73.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 51/211 (24%), Positives = 97/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+TGHT + S + + VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFTGHTGD---VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + ++ P N A+G+ +D T +++
Sbjct: 225 HESDINAICFFPNGNAFATGS--DDATCRLF 253
Score = 61 (26.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQD 76
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 315 (115.9 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 78/247 (31%), Positives = 134/247 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD T CLK L GHT V C+ ++ + +IV
Sbjct: 224 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDER--VIV 279
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-TG 189
+G+ D TVR+WDV +G+ L L H++ V + F +G M VT S D +WD AS T
Sbjct: 280 TGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC-NGLM-VTCSKDRSIAVWDMASPTD 337
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 338 ISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 395
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 396 Y-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYDG 448
Query: 310 DRTVKIW 316
+K+W
Sbjct: 449 K--IKVW 453
Score = 259 (96.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 67/214 (31%), Positives = 111/214 (51%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ TGH V L D R +V+ S D T+R+WDV + L TLI H V + F
Sbjct: 258 LKILTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC- 314
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D +
Sbjct: 315 -NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 371
Query: 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242
+W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 372 VWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 429 ELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 457
Score = 220 (82.5 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 57/181 (31%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
+L + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 339 SLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 388
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 389 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 444
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 445 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 502
Query: 185 D 185
D
Sbjct: 503 D 503
Score = 141 (54.7 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 42/154 (27%), Positives = 77/154 (50%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
D I++ D +IWD T C+K L S + + + I+ G+ D+T+R+W
Sbjct: 234 DDEKIISGLRDNSIKIWDKQTLECLKILTGHTG---SVLCLQYDERVIVTGSSDSTVRVW 290
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKLE 284
+ ++G++L T H + + F NG +V+ S+D + +W++ S + + L
Sbjct: 291 DVNSGEVLNTLIHHNEA--VLHLRFC--NG-LMVTCSKDRSIAVWDMASPTDISLRRVLV 345
Query: 285 GHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 346 GHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 374
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 314 (115.6 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 86/322 (26%), Positives = 147/322 (45%)
Query: 4 DQSLESFRPYTLTQTLN-GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXX 62
D E F P L++ + G + +FS DG+ L + S D
Sbjct: 195 DVEEEKF-PTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLK 253
Query: 63 XXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCV 121
F + V + FS D+ L + + D I++W + + CL+ H+ V C+
Sbjct: 254 YQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCL 313
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+F+ S+ I+S +FD+T+RI +K+GK LK HS V F +DG I+++S DG
Sbjct: 314 SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTV 373
Query: 182 RIWDASTGHC---MKTLIDDENPPV---SFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL 235
+IW+ T C K+L + S + N + +V NT+ + N G+I+
Sbjct: 374 KIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIV 432
Query: 236 KTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294
++++ G + S G++I ED +Y + + K+ + L H VI +A
Sbjct: 433 RSFSSGKREGGDFVCCALS-PRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIA 491
Query: 295 SHPTENIIASGALDNDRTVKIW 316
HP +N+IA+ D +K+W
Sbjct: 492 HHPHQNLIAT--YSEDGLLKLW 511
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDDE----NPPVSFVKFSPNG 212
V F+ DG +VT S DG +W+ +TG K L D + V + FS +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT 276
Query: 213 KFILVGTLDNTLRLWNYSTGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
+ + G D +++W +G+ L+ + H+ C+S FS + + I+S S D + +
Sbjct: 277 EMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLS--FSKDSSQ-ILSASFDQTIRI 333
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
L+S K +++ GH+ V + I S + +D TVKIW +
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISAS--SDGTVKIWNMK 379
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 314 (115.6 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 86/322 (26%), Positives = 147/322 (45%)
Query: 4 DQSLESFRPYTLTQTLN-GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXX 62
D E F P L++ + G + +FS DG+ L + S D
Sbjct: 195 DVEEEKF-PTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLK 253
Query: 63 XXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCV 121
F + V + FS D+ L + + D I++W + + CL+ H+ V C+
Sbjct: 254 YQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCL 313
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+F+ S+ I+S +FD+T+RI +K+GK LK HS V F +DG I+++S DG
Sbjct: 314 SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTV 373
Query: 182 RIWDASTGHC---MKTLIDDENPPV---SFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL 235
+IW+ T C K+L + S + N + +V NT+ + N G+I+
Sbjct: 374 KIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIV 432
Query: 236 KTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294
++++ G + S G++I ED +Y + + K+ + L H VI +A
Sbjct: 433 RSFSSGKREGGDFVCCALS-PRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIA 491
Query: 295 SHPTENIIASGALDNDRTVKIW 316
HP +N+IA+ D +K+W
Sbjct: 492 HHPHQNLIAT--YSEDGLLKLW 511
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDDE----NPPVSFVKFSPNG 212
V F+ DG +VT S DG +W+ +TG K L D + V + FS +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT 276
Query: 213 KFILVGTLDNTLRLWNYSTGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
+ + G D +++W +G+ L+ + H+ C+S FS + + I+S S D + +
Sbjct: 277 EMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLS--FSKDSSQ-ILSASFDQTIRI 333
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
L+S K +++ GH+ V + I S + +D TVKIW +
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISAS--SDGTVKIWNMK 379
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 314 (115.6 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 86/322 (26%), Positives = 147/322 (45%)
Query: 4 DQSLESFRPYTLTQTLN-GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXX 62
D E F P L++ + G + +FS DG+ L + S D
Sbjct: 195 DVEEEKF-PTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLK 253
Query: 63 XXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCV 121
F + V + FS D+ L + + D I++W + + CL+ H+ V C+
Sbjct: 254 YQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCL 313
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+F+ S+ I+S +FD+T+RI +K+GK LK HS V F +DG I+++S DG
Sbjct: 314 SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTV 373
Query: 182 RIWDASTGHC---MKTLIDDENPPV---SFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL 235
+IW+ T C K+L + S + N + +V NT+ + N G+I+
Sbjct: 374 KIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIV 432
Query: 236 KTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294
++++ G + S G++I ED +Y + + K+ + L H VI +A
Sbjct: 433 RSFSSGKREGGDFVCCALS-PRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIA 491
Query: 295 SHPTENIIASGALDNDRTVKIW 316
HP +N+IA+ D +K+W
Sbjct: 492 HHPHQNLIAT--YSEDGLLKLW 511
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDDE----NPPVSFVKFSPNG 212
V F+ DG +VT S DG +W+ +TG K L D + V + FS +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT 276
Query: 213 KFILVGTLDNTLRLWNYSTGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
+ + G D +++W +G+ L+ + H+ C+S FS + + I+S S D + +
Sbjct: 277 EMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLS--FSKDSSQ-ILSASFDQTIRI 333
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
L+S K +++ GH+ V + I S + +D TVKIW +
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISAS--SDGTVKIWNMK 379
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 314 (115.6 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 86/322 (26%), Positives = 147/322 (45%)
Query: 4 DQSLESFRPYTLTQTLN-GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXX 62
D E F P L++ + G + +FS DG+ L + S D
Sbjct: 195 DVEEEKF-PTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLK 253
Query: 63 XXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCV 121
F + V + FS D+ L + + D I++W + + CL+ H+ V C+
Sbjct: 254 YQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCL 313
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+F+ S+ I+S +FD+T+RI +K+GK LK HS V F +DG I+++S DG
Sbjct: 314 SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTV 373
Query: 182 RIWDASTGHC---MKTLIDDENPPV---SFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL 235
+IW+ T C K+L + S + N + +V NT+ + N G+I+
Sbjct: 374 KIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIV 432
Query: 236 KTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294
++++ G + S G++I ED +Y + + K+ + L H VI +A
Sbjct: 433 RSFSSGKREGGDFVCCALS-PRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIA 491
Query: 295 SHPTENIIASGALDNDRTVKIW 316
HP +N+IA+ D +K+W
Sbjct: 492 HHPHQNLIAT--YSEDGLLKLW 511
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDDE----NPPVSFVKFSPNG 212
V F+ DG +VT S DG +W+ +TG K L D + V + FS +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT 276
Query: 213 KFILVGTLDNTLRLWNYSTGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
+ + G D +++W +G+ L+ + H+ C+S FS + + I+S S D + +
Sbjct: 277 EMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLS--FSKDSSQ-ILSASFDQTIRI 333
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
L+S K +++ GH+ V + I S + +D TVKIW +
Sbjct: 334 HGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISAS--SDGTVKIWNMK 379
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 314 (115.6 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 85/322 (26%), Positives = 147/322 (45%)
Query: 4 DQSLESFRPYTLTQTLN-GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXX 62
D E F P L++ + G + +FS DG+ L + S D
Sbjct: 195 DVEEEKF-PTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLK 253
Query: 63 XXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCV 121
F + V + FS D+ L + + D I++W + + CL+ H+ V C+
Sbjct: 254 YQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCL 313
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+F+ S+ I+S +FD+T+RI +K+GK LK HS V F +DG I+++S DG
Sbjct: 314 SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTV 373
Query: 182 RIWDASTGHC---MKTLIDDENPPV---SFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL 235
++W+ T C K+L + S + N + +V NT+ + N G+I+
Sbjct: 374 KVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIV 432
Query: 236 KTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294
++++ G + S G++I ED +Y + + K+ + L H VI +A
Sbjct: 433 RSFSSGKREGGDFVCCALS-PRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIA 491
Query: 295 SHPTENIIASGALDNDRTVKIW 316
HP +N+IA+ D +K+W
Sbjct: 492 HHPHQNLIAT--YSEDGLLKLW 511
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 260 (96.6 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 62/208 (29%), Positives = 99/208 (47%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F DS+ +V++S D T LWD+ TA T GH+ V ++ +P
Sbjct: 137 RELPGHTGYLSCCRFLDDSQ-IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
VSGA D + ++WD++ G C + H + AV F +G T S D CR++D
Sbjct: 196 MRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP--PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
+ L +N ++ V FS +G+ +L G D +W+ G GH N
Sbjct: 256 RADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNR 314
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 315 VSCLGVT---DDGMAVATGSWDSFLRIW 339
Score = 230 (86.0 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 66/253 (26%), Positives = 119/253 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + LP H+ ++ F D + IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRF-LDDSQIVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
T T + V + SP+ + + G D + +LW+ G +++TGH +
Sbjct: 172 ETAQ-QTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD---PVISVASHPTENIIA 303
I++ NG +GS+D+ L++L++ + + L H + + SVA + ++
Sbjct: 229 -INAVSFFPNGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSKSGRLLL 286
Query: 304 SGALDNDRTVKIW 316
+G +D +W
Sbjct: 287 AGY--DDFNCNVW 297
Score = 221 (82.9 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 58/217 (26%), Positives = 102/217 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D FTGH
Sbjct: 135 VSRELPGHTGYLSCCRFLDDSQIV-TSSGDTTCALWDIETAQQTTT--------FTGHSG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L S D R VS + D + +LWD+ C ++ GH + + V+F P +G+
Sbjct: 186 DVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L +L +H + +T+V F++ G +++ D C +WD G
Sbjct: 246 DDATCRLFDLRADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ LR+WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 178 (67.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/211 (23%), Positives = 97/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQ-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ T + T+TGH+ +S + + + VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETAQQTTTFTGHSGDVMSLSLSPDM---RTFVSGACDASSKLWDIRDGMCRQSFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + +V+ P A+G+ +D T +++
Sbjct: 225 HVSDINAVSFFPNGYAFATGS--DDATCRLF 253
Score = 65 (27.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + +D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQD 76
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 59/171 (34%), Positives = 83/171 (48%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ VS + + +VSAS DKTI++W+V T C+KT GH +V V N +I
Sbjct: 19 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 78
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S + D+TVR+W V T +C L H V + + + SSY + + GH
Sbjct: 79 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE------SSYSSISEATGSEVGH 132
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
+N V V F GKFIL D TLR+W+Y + +KT H
Sbjct: 133 --------DNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 174
Score = 209 (78.6 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 41/119 (34%), Positives = 67/119 (56%)
Query: 96 TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA 155
TI+LWD C++T+ GH + V V P + IVS + D+T+++W+V+TG C+K
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 156 HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKF 214
H + V V N+DGT+I + S D R+W +T C L + E+ V + ++P +
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-VECISWAPESSY 119
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 60/221 (27%), Positives = 104/221 (47%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
L F+ + +T++GH +SSV +G + S+S DK +
Sbjct: 5 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC--------V 56
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
+ FTGH + V + + D + S S+D+T+R+W V T C L H + V C+++ P+
Sbjct: 57 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 116
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
S+ + E TG +V H + V V F+ G I++ + D R+WD
Sbjct: 117 SSY---SSISEA-------TGS--EV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 162
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
CMKTL E+ V+ + F +++ G++D T+++W
Sbjct: 163 KNKRCMKTLNAHEHF-VTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 174 (66.3 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 27/75 (36%), Positives = 51/75 (68%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH+ V ++F S +F++S +DDKT+R+WD C+KTL H ++V ++F+ + +
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 131 VSGAFDETVRIWDVK 145
V+G+ D+TV++W+ +
Sbjct: 191 VTGSVDQTVKVWECR 205
Score = 159 (61.0 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 112 IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171
+GH N+V V F+ I+S A D+T+R+WD K +C+K L AH VT++DF++
Sbjct: 130 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 189
Query: 172 IVTSSYDGLCRIWD 185
+VT S D ++W+
Sbjct: 190 VVTGSVDQTVKVWE 203
Score = 146 (56.5 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 223 TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282
T++LW++ + ++T GH ++ +SS + NG +IVS S D + +WE+Q+ V+
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHN---VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 58
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GH + V V + +IAS ND+TV++W
Sbjct: 59 FTGHREWVRMVRPNQDGTLIAS--CSNDQTVRVW 90
Score = 145 (56.1 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 31/112 (27%), Positives = 58/112 (51%)
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
T+++WD + +C++ + H V++V +G IV++S D ++W+ TG+C+KT
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
V V+ + +G I + D T+R+W +T + H + CIS
Sbjct: 62 HREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 112
Score = 116 (45.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 206 VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE 265
V F GKFIL D TLR+W+Y + +KT H + + S F T Y+V+GS
Sbjct: 139 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKT-APYVVTGSV 195
Query: 266 DSCVYLWE 273
D V +WE
Sbjct: 196 DQTVKVWE 203
Score = 102 (41.0 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
GH N + + GK+I+S ++D + +W+ ++++ ++ L H V S+ H T
Sbjct: 131 GHDN---WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 187
Query: 300 NIIASGALDNDRTVKIW 316
+ +G++D +TVK+W
Sbjct: 188 PYVVTGSVD--QTVKVW 202
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 74/251 (29%), Positives = 133/251 (52%)
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL-IGHTNYVFCVNFNPQ 126
K GH GV + SSD + + S+S D T+ LWD + L G + ++ V F+P
Sbjct: 80 KLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVD-LWTVQFSPC 138
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT-AVDFNRDGTMIVTSSYDGLCRIWD 185
+ ++SG D + ++ V+TGK + L A + T ++ ++ DG I + + DG+ I+D
Sbjct: 139 NKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFD 198
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ G ++TL + PV + FSPN + +L + D ++L++ + ++ T +GH +
Sbjct: 199 VAAGKVVQTL-EGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWV 257
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305
C++ FS +GK+ S S D+ V +W+ RK + HTD V V P + +AS
Sbjct: 258 LCVA--FS-EDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASA 314
Query: 306 ALDNDRTVKIW 316
+ D+++ I+
Sbjct: 315 S--EDKSLNIY 323
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 60/184 (32%), Positives = 101/184 (54%)
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKV---LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+ +V+G D+ V++WD++ LK+ L H+ V +V + DG I +SS D +W
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
DA +G K L+ + V+FSP K+++ G D + +++ TGK +T N
Sbjct: 113 DARSGD-KKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQ-NG 170
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
KY +S +S +GKYI SG+ D + ++++ + KVVQ LEGH PV S+ P ++ +
Sbjct: 171 KYTLSIAYS-PDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLT 229
Query: 305 GALD 308
+ D
Sbjct: 230 ASDD 233
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 71/267 (26%), Positives = 125/267 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
L L GH + SV S DG+ +ASSS D + +T
Sbjct: 77 LRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWT---- 132
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTN-YVFCVNFNPQSNMIVSG 133
+ FS +++++S +D I ++ V T +TL Y + ++P I SG
Sbjct: 133 ----VQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASG 188
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
A D + I+DV GK ++ L H+ PV ++ F+ + +++T+S DG +++D + +
Sbjct: 189 AIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVG 248
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
TL + V V FS +GK + DN++++W+ S K L T+ HT+ + + +S
Sbjct: 249 TLSGHASW-VLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVR--YS 305
Query: 254 VTNGKYIVSGSEDSCVYLWELQSRKVV 280
N K + S SED + ++ +V
Sbjct: 306 PGNDK-VASASEDKSLNIYYCPPNAIV 331
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 68/240 (28%), Positives = 117/240 (48%)
Query: 87 FLVSASDDKTIRLWDVPTATCLKT---LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
FLV+ D +++WD+ LK L GH V V + I S + D T+ +WD
Sbjct: 54 FLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWD 113
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPV 203
++G +L + V F+ +++ DG ++ TG +TL D +N
Sbjct: 114 ARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTL-DAQNGKY 172
Query: 204 SF-VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
+ + +SP+GK+I G +D + +++ + GK+++T GH S FS N + +++
Sbjct: 173 TLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVR--SLCFS-PNSQLLLT 229
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW-TQEKE 321
S+D + L+++ VV L GH V+ VA AS + DN +VKIW T E++
Sbjct: 230 ASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDN--SVKIWDTSERK 287
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 167 RDGTMIVTSSYDGLCRIWDASTGHCMKTL--IDDENPPVSFVKFSPNGKFILVGTLDNTL 224
R +VT D L ++WD + +K + V V S +G+ I +LD+T+
Sbjct: 50 RPKDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTM 109
Query: 225 RLWNYSTG--KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282
LW+ +G K L ++ G + + + FS N KY++SG D + ++ +++ K Q
Sbjct: 110 CLWDARSGDKKHLLSF-GPVDL-WTVQ--FSPCN-KYVISGLNDGKISMYSVETGKAEQT 164
Query: 283 LEGHTDP-VISVASHPTENIIASGALDNDRTV 313
L+ +S+A P IASGA+D T+
Sbjct: 165 LDAQNGKYTLSIAYSPDGKYIASGAIDGIITI 196
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 266 (98.7 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 60/207 (28%), Positives = 99/207 (47%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D + LWD+ T + + +GHT V ++ PQ
Sbjct: 137 RELPGHGGYLSCCRFLDDNQ-IVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
VSGA D + ++WD++ G C + P H + AV F +G T S D CR++D
Sbjct: 196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDI 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ D ++ V FS +G+ +L G D +W+ + GH N
Sbjct: 256 RADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T NG + +GS DS + +W
Sbjct: 316 SCLGVT---ENGMAVATGSWDSFLRVW 339
Score = 216 (81.1 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 65/257 (25%), Positives = 120/257 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + +DSR LVSAS D + +WD T + + +++V + P + +
Sbjct: 53 GHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + LP H ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRF-LDDNQIVTSSGDMSCGLWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG + + + V + +P K + G D + +LW+ G +T+ GH +
Sbjct: 172 ETGLQVTSFLGHTGD-VMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDIN 230
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD---PVISVASHPTENIIA 303
+ TF NG+ +GS+D+ L+++++ + + + H + + SVA + ++
Sbjct: 231 AV--TF-FPNGQAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSKSGRLLL 286
Query: 304 SGALDNDRTVKIWTQEK 320
+G +D +W K
Sbjct: 287 AGY--DDFNCNVWDTMK 301
Score = 200 (75.5 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 57/221 (25%), Positives = 95/221 (42%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQ--KFT 70
Y L +T G++R +S H G L D LQ F
Sbjct: 124 YNL-KTREGNVR-VSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFL 181
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V L + + VS + D + +LWD+ C +T GH + + V F P
Sbjct: 182 GHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAF 241
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+G+ D T R++D++ + L + +H + +T+V F++ G +++ D C +WD
Sbjct: 242 ATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTM 300
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + NG + G+ D+ LR+WN
Sbjct: 301 KAERSGILAGHDNR-VSCLGVTENGMAVATGSWDSFLRVWN 340
Score = 170 (64.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 48/211 (22%), Positives = 94/211 (44%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S +VS + D + +WD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G+ + D +C I++ T G+ + + +S +F + + I+ + D +
Sbjct: 109 GSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQ-IVTSSGDMSCG 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG + ++ GHT +S K VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGLQVTSFLGHTGDVMALSLA---PQCKTFVSGACDASAKLWDIREGVCKQTFPG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + +V P A+G+ +D T +++
Sbjct: 225 HESDINAVTFFPNGQAFATGS--DDATCRLF 253
Score = 57 (25.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + +D R L S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGNDSRNLVSASQD 76
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 82/287 (28%), Positives = 131/287 (45%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVF 81
H ++ FS DGR L ++S D L + GH V F
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDD--------GCVYVWGTKSGRLLWRLAGHRGPVKSCCF 76
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
S D R + S+S D +IRLWDV + CL L GH V V+F+P S + SG +D+ +
Sbjct: 77 SPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD--ASTGHCMKTLIDDE 199
W+V++G+ + +L H D + + DF+ + T S+D IWD AST ++
Sbjct: 137 WEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196
Query: 200 NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259
+S + +S +G + G+ D T+ +W +T + GHT + S FS K
Sbjct: 197 TGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTI--WVNSLAFSPDELK- 252
Query: 260 IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
+ S V +W+ + K ++ L+G D + P ++ SGA
Sbjct: 253 LASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 69/250 (27%), Positives = 123/250 (49%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH + S FS DGRL+ASSS+D L GH++ V
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKC--------LHVLKGHQRSVET 115
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ FS DS+ L S DK +W+V + + L+GH + + +F+P S+ + +G++D T
Sbjct: 116 VSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDST 175
Query: 139 VRIWDVKTGKCLKV---LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
V IWD++ + L H+ ++ + ++ G ++ + S+D +W +T + +
Sbjct: 176 VHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNN-LPLQ 233
Query: 196 IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY-CISSTFSV 254
+ V+ + FSP+ + T+++W+ TGK L+T G + + CI F+
Sbjct: 234 LKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACI---FT- 289
Query: 255 TNGKYIVSGS 264
+GK +VSG+
Sbjct: 290 PDGKLLVSGA 299
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 54/161 (33%), Positives = 81/161 (50%)
Query: 156 HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFI 215
H V F+ DG ++T+S DG +W +G + L P V FSP+G+ I
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGP-VKSCCFSPDGRLI 83
Query: 216 LVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275
+ D+++RLW+ + K L GH S +S FS + K + SG D +WE+Q
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVS--FS-PDSKQLASGGWDKRAIVWEVQ 140
Query: 276 SRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
S + V L GH D + S PT + +A+G+ D+ TV IW
Sbjct: 141 SGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDS--TVHIW 179
Score = 135 (52.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 43/128 (33%), Positives = 55/128 (42%)
Query: 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXL 66
L + P L GH IS + +S G LLAS S DK L
Sbjct: 181 LRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLP-------L 232
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
Q GH V+ L FS D L SA +T+++WD T CL+TL G + F P
Sbjct: 233 Q-LKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPD 291
Query: 127 SNMIVSGA 134
++VSGA
Sbjct: 292 GKLLVSGA 299
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 230 STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDP 289
+ G++ + Y H C S FS +G+ +++ S+D CVY+W +S +++ +L GH P
Sbjct: 15 AVGRV-RFYGQHHGEVNC--SAFS-PDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGP 70
Query: 290 VISVASHPTENIIASGALDNDRTVKIW 316
V S P +IAS + +D ++++W
Sbjct: 71 VKSCCFSPDGRLIASSS--SDHSIRLW 95
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 79/277 (28%), Positives = 130/277 (46%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
++L GH ++ V F G+LLAS SAD ++ GH+ V
Sbjct: 144 RSLKGHTDSVQDVAFDAQGKLLASCSAD-------LSIKLWDFQQSYECIKTMHGHDHNV 196
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
S + F +++SAS D+TI++W+V T C+KT GH +V V + + ++ + + D
Sbjct: 197 SSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSND 256
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF----------------NR----DGTMIVTSS 176
+T+R+W + C L H V + + N+ G + + S
Sbjct: 257 QTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGS 316
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D RIWD S G C+ TL +N V + F P GK+++ + D T+R+W+ + +K
Sbjct: 317 RDKTIRIWDVSVGLCLLTLSGHDNW-VRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK 375
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
T H + +C S F + Y++SGS D V +WE
Sbjct: 376 TLYAHQH--FCTSIDFHKAH-PYVISGSVDQTVKVWE 409
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 82/317 (25%), Positives = 140/317 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH +I+ V F L+ S+S D + GH V
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYE--------RSLKGHTDSVQ 154
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTA-TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
D+ F + + L S S D +I+LWD + C+KT+ GH + V V F P + ++S + D
Sbjct: 155 DVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRD 214
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
T+++W+V TG C+K H + V V + +G++ T S D R+W ++ C L
Sbjct: 215 RTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELR 274
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL------KTYT-GHTNSKYCIS 249
D E+ V + ++P + + G L KT + C+
Sbjct: 275 DHEHT-VECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLL 333
Query: 250 STFSVTN----------GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
+ N GKY+VS S+D + +W+L++++ ++ L H S+ H
Sbjct: 334 TLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAH 393
Query: 300 NIIASGALDNDRTVKIW 316
+ SG++D +TVK+W
Sbjct: 394 PYVISGSVD--QTVKVW 408
Score = 231 (86.4 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 66/249 (26%), Positives = 114/249 (45%)
Query: 2 SSDQSLESF---RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXX 58
S+D S++ + + Y +T++GH +SSV F G + S+S D+
Sbjct: 169 SADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYC- 227
Query: 59 XXXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV 118
++ +TGH + V + + + S+D+TIR+W + C L H + V
Sbjct: 228 -------VKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTV 280
Query: 119 FCVNFNP--------------------QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD 158
C+ + P Q + SG+ D+T+RIWDV G CL L H +
Sbjct: 281 ECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDN 340
Query: 159 PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218
V + F+ G +V++S D R+WD CMKTL ++ S + F +++ G
Sbjct: 341 WVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTS-IDFHKAHPYVISG 399
Query: 219 TLDNTLRLW 227
++D T+++W
Sbjct: 400 SVDQTVKVW 408
Score = 188 (71.2 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 30 KFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVFSSDSRFLV 89
K H G LAS S DK L +GH+ V L F ++LV
Sbjct: 304 KGHHQGPFLASGSRDKTIRIWDVSVGLC--------LLTLSGHDNWVRGLAFHPGGKYLV 355
Query: 90 SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145
SASDDKTIR+WD+ C+KTL H ++ ++F+ ++SG+ D+TV++W+ +
Sbjct: 356 SASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 311 (114.5 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 78/248 (31%), Positives = 135/248 (54%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ +GV L + D ++S D +I++WD + CLK L GHT V C+ ++ + +IV
Sbjct: 219 NSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 274
Query: 132 SGAFDETV-RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD-AS-T 188
+G+ D TV R+WDV TG+ L L H++ V + F+ +G M VT S D +WD AS T
Sbjct: 275 TGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGLM-VTCSKDRSIAVWDMASPT 332
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
++ ++ V+ V F + K+I+ + D T+++W+ ST + ++T GH C+
Sbjct: 333 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 390
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ +VSGS D+ + LW+++ ++ LEGH + ++ + I+ SGA D
Sbjct: 391 QY-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIRFDNKRIV-SGAYD 443
Query: 309 NDRTVKIW 316
+K+W
Sbjct: 444 GK--IKVW 449
Score = 259 (96.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 68/215 (31%), Positives = 112/215 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTI-RLWDVPTATCLKTLIGHTNYVFCVNFN 124
L+ TGH V L D R +V+ S D T+ R+WDV T L TLI H V + F+
Sbjct: 253 LKVLTGHTGSV--LCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS 310
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+ ++V+ + D ++ +WD+ + + +VL H V VDF D IV++S D
Sbjct: 311 --NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTI 366
Query: 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
++W ST ++TL + ++ +++ + ++ G+ DNT+RLW+ G L+ GH
Sbjct: 367 KVWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 423
Query: 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
CI F + K IVSG+ D + +W+LQ+
Sbjct: 424 EELVRCIR--F---DNKRIVSGAYDGKIKVWDLQA 453
Score = 224 (83.9 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
TL + L GH A++ V F D + + S+S D+ ++ GH+
Sbjct: 335 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEF--------VRTLNGHK 384
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+G++ L + R +VS S D TIRLWD+ CL+ L GH V C+ F+ + IVSG
Sbjct: 385 RGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSG 440
Query: 134 AFDETVRIWDVKTGK---------CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
A+D +++WD++ CL+ L HS V + F D I++SS+D IW
Sbjct: 441 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIW 498
Query: 185 D 185
D
Sbjct: 499 D 499
Score = 200 (75.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 62/264 (23%), Positives = 119/264 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+ L GH ++ +++ D R++ + S+D L H + V
Sbjct: 254 KVLTGHTGSVLCLQY--DERVIVTGSSDSTVSRVWDVNTGEV-------LNTLIHHNEAV 304
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDV--PT-ATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
L FS+ +V+ S D++I +WD+ PT T + L+GH V V+F+ + IVS
Sbjct: 305 LHLRFSNG--LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSA 360
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D T+++W T + ++ L H + + + RD ++V+ S D R+WD G C++
Sbjct: 361 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RD-RLVVSGSSDNTIRLWDIECGACLR 418
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253
L E V ++F + K I+ G D +++W+ + + + +
Sbjct: 419 VLEGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR 475
Query: 254 VTNGKY----IVSGSEDSCVYLWE 273
V ++ I+S S D + +W+
Sbjct: 476 VFRLQFDEFQIISSSHDDTILIWD 499
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 43/155 (27%), Positives = 79/155 (50%)
Query: 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTL-RL 226
D I++ D +IWD ++ C+K L S + + + I+ G+ D+T+ R+
Sbjct: 229 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDERVIVTGSSDSTVSRV 285
Query: 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV---QKL 283
W+ +TG++L T H + + FS NG +V+ S+D + +W++ S + + L
Sbjct: 286 WDVNTGEVLNTLIHHNEA--VLHLRFS--NG-LMVTCSKDRSIAVWDMASPTDITLRRVL 340
Query: 284 EGHTDPVISVASHPTENII-ASGALDNDRTVKIWT 317
GH ++V + I+ ASG DRT+K+W+
Sbjct: 341 VGHR-AAVNVVDFDDKYIVSASG----DRTIKVWS 370
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 313 (115.2 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 87/296 (29%), Positives = 140/296 (47%)
Query: 23 LRAISSVKFSHDGRLL--ASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV 80
L + F H +LL A SAD K H+ VS +
Sbjct: 268 LTTVCFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARKLKAGPHKADVSKIR 327
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140
+ D L +DD+ D + + +KTL GH+ V+ F ++ ++S + D TVR
Sbjct: 328 LACD--VLEEEADDE-----DA-SGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVR 379
Query: 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN 200
WD+K+ + H+ PV VD + T+S+D R+W + + ++ L
Sbjct: 380 YWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLR-LYAGHL 438
Query: 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260
V VKF PN +I G+ D T+RLW+ G ++ +TGH ++ FS NGKY+
Sbjct: 439 SDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGP--VLTLAFS-PNGKYL 495
Query: 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
S ED + LW+L S + + L GHTD + S++ +++AS ++DN TV++W
Sbjct: 496 ASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDN--TVRVW 549
Score = 278 (102.9 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 67/237 (28%), Positives = 112/237 (47%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
++ GH V F +D+ L+S S+D T+R WD+ + T GH V+ V+ +P
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSP 406
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
S + + D T R+W L++ H V V F+ + I T S D R+W
Sbjct: 407 CSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWS 466
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
G ++ L PV + FSPNGK++ D L+LW+ ++G + K GHT++
Sbjct: 467 TRQGASVR-LFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDT- 524
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENII 302
ISS + + S S D+ V +W++++ +G + +I + T NI+
Sbjct: 525 --ISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNIL 579
Score = 257 (95.5 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 60/212 (28%), Positives = 97/212 (45%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+TL GH + F D L S S D + GH V
Sbjct: 348 KTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVL--------YRGHAYPV 399
Query: 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136
D+ S S + +AS D+T RLW L+ GH + V CV F+P SN I +G+ D
Sbjct: 400 WDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTD 459
Query: 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196
+TVR+W + G +++ H PV + F+ +G + ++ D ++WD ++G K L
Sbjct: 460 KTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDL- 518
Query: 197 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+S + FS + + ++DNT+R+W+
Sbjct: 519 RGHTDTISSLSFSQDSSLVASASMDNTVRVWD 550
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00055
Identities = 40/145 (27%), Positives = 64/145 (44%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S+D+++ S R + GH + ++ FS +G+ LAS+ D+
Sbjct: 457 STDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGL-- 514
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV-------PTATCLKTLI 112
+ GH +S L FS DS + SAS D T+R+WD+ PT C LI
Sbjct: 515 ------FKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELI 568
Query: 113 GH----TNYVFCVNFNPQSNMIVSG 133
G T+ + V F + ++V+G
Sbjct: 569 GQYTGSTSNILNVQFMACNLLLVTG 593
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 81/255 (31%), Positives = 136/255 (53%)
Query: 71 GHEQGVSDLVFSSDSR-FLVSASDDKTIRLWDV-PT-AT----CLKTLIGHTNYVFCVNF 123
GH V+ + S ++ ++S+S DKT+ +W + PT AT ++L GH+++V V
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ +SG++D T+R+WD+ G ++ H+ V +V F+ D I++ S D ++
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKV 138
Query: 184 WDASTGHCMKTLIDDENPP--VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
W+ + G C TL E VS ++FSPN I+ G+ DN +++W+ + K T T H
Sbjct: 139 WN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDH 197
Query: 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENI 301
T Y + T S +G SG +D+ LWEL S K + KLE + + ++A P +
Sbjct: 198 TG--YVNTVTIS-PDGSLCASGGKDTFACLWELSSGKPLYKLEAR-NTINALAFSPNKYW 253
Query: 302 IASGALDNDRTVKIW 316
+ S A D D+ + IW
Sbjct: 254 L-SAATD-DKII-IW 265
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 82/275 (29%), Positives = 131/275 (47%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGR-LLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y +L GH ++S+ S + + SSS DK K G
Sbjct: 11 YLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLK--G 68
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H V D+V S D +F +S S D T+RLWD+ + GHT V V F+ + I+
Sbjct: 69 HSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQII 128
Query: 132 SGAFDETVRIWDVKTGKCLKVL--P-AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
SG+ D T+++W+ G+C L P AH D V+ + F+ + IV+ S+D +IWD +
Sbjct: 129 SGSRDATIKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKS 187
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C TL D V+ V SP+G G D LW S+GK L Y ++ I
Sbjct: 188 FKCNHTLTDHTGY-VNTVTISPDGSLCASGGKDTFACLWELSSGKPL--YK--LEARNTI 242
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283
++ + + KY +S + D + +W+L +++V+ ++
Sbjct: 243 NA-LAFSPNKYWLSAATDDKIIIWDLLTKQVLAEI 276
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 69/218 (31%), Positives = 109/218 (50%)
Query: 103 PTATCLK--TLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDV------KTGKCLKVL 153
P T L+ +L+GH +V + +P++ + I+S + D+TV +W + GK + L
Sbjct: 7 PQVTYLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSL 66
Query: 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK 213
HS V V + DG ++ S+D R+WD + G + L V V FS + +
Sbjct: 67 KGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTR-LFKGHTQDVMSVAFSSDNR 125
Query: 214 FILVGTLDNTLRLWNYSTGKILKTYTG---HTNSKYCISSTFSVTNGKYIVSGSEDSCVY 270
I+ G+ D T+++WN + G+ T G H + CI FS N IVSGS D+ V
Sbjct: 126 QIISGSRDATIKVWN-TLGECKFTLEGPEAHQDWVSCIR--FS-PNTPTIVSGSWDNKVK 181
Query: 271 LWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+W+++S K L HT V +V P ++ ASG D
Sbjct: 182 IWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKD 219
Score = 187 (70.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQG 75
T+ GH + + SV FS D R + S S D L+ H+
Sbjct: 105 TRLFKGHTQDVMSVAFSSDNRQIISGSRD------ATIKVWNTLGECKFTLEGPEAHQDW 158
Query: 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF 135
VS + FS ++ +VS S D +++WD+ + C TL HT YV V +P ++ SG
Sbjct: 159 VSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGK 218
Query: 136 DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
D +W++ +GK L L A + + A+ F+ + + ++ D + IWD T + +
Sbjct: 219 DTFACLWELSSGKPLYKLEARNT-INALAFSPNKYWLSAATDDKII-IWDLLTKQVLAEI 276
Query: 196 IDD 198
+ +
Sbjct: 277 VPE 279
Score = 181 (68.8 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 56/173 (32%), Positives = 86/173 (49%)
Query: 153 LPAHSDPVTAVDFNRDGT-MIVTSSYDGLCRIW-----DA-STGHCMKTLIDDENPPVSF 205
L H+ VT++ + + I++SS D +W DA S G ++L + V
Sbjct: 17 LVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSL-KGHSHFVQD 75
Query: 206 VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE 265
V S +G+F L G+ DNTLRLW+ + G + + GHT +S FS N + I+SGS
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQD--VMSVAFSSDN-RQIISGSR 132
Query: 266 DSCVYLWEL--QSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
D+ + +W + + ++ E H D V + P I SG+ DN VKIW
Sbjct: 133 DATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNK--VKIW 183
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 259 (96.2 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 59/207 (28%), Positives = 96/207 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D T LWD+ T T GHT V ++ P
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ + VSGA D + ++WDV+ G C + H + A+ F +G T S D CR++D
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ D ++ V FS +G+ +L G D +W+ GH N
Sbjct: 256 RADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---DDGMAVATGSWDSFLKIW 339
Score = 232 (86.7 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 65/252 (25%), Positives = 118/252 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + +DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + L H+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T +S + +P+ + + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQQTTTFAGHTGDVMS-LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRK--VVQKLEGHTDPVISVASHPTENIIAS 304
I++ NG +GS+D+ L++L++ + +V + + SVA + ++ +
Sbjct: 229 -INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLA 287
Query: 305 GALDNDRTVKIW 316
G +D +W
Sbjct: 288 GY--DDFNCNVW 297
Score = 218 (81.8 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 57/217 (26%), Positives = 101/217 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D F GH
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTT--------FAGHTG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L + D+R VS + D + +LWDV C +T GH + + + F P N +G+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L V +H + +T+V F++ G +++ D C +WDA
Sbjct: 246 DDATCRLFDLRADQELMVY-SHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ L++WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 190 (71.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 50/211 (23%), Positives = 96/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+ GHT + S + + VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFAGHTGD---VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + ++ P N A+G+ +D T +++
Sbjct: 225 HESDINAICFFPNGNAFATGS--DDATCRLF 253
Score = 61 (26.5 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQD 76
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 311 (114.5 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 82/324 (25%), Positives = 146/324 (45%)
Query: 2 SSDQSLESFRPYTLTQTLNGHLRAISSVK-FSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
S+D + + P GH + +S+++ F G LL S S D
Sbjct: 266 SADIPDKCYLPKKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMD-------CKIKLWEVY 318
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC 120
++ F GH + V D+ F++ +SA+ D+ I+LWD T C+ +C
Sbjct: 319 NERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTNR-KVPYC 377
Query: 121 VNFNP---QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY 177
V FNP + N++V+G D+ + WD+++G+ ++ H V + F + V++S
Sbjct: 378 VKFNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSD 437
Query: 178 DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL-- 235
D R+W+ K + + + V SPNGK++ ++DN + ++ L
Sbjct: 438 DKSLRVWEWDIPADFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK 497
Query: 236 -KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294
K + GH + Y FS + Y+VSG D + +W+ ++ K+ +++ H IS
Sbjct: 498 KKIFKGHMVAGYACQVDFS-PDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISAL 556
Query: 295 SHP--TENIIASGALDNDRTVKIW 316
HP T +I G D +K+W
Sbjct: 557 WHPHETSKVITCGW---DGQIKLW 577
Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 61/276 (22%), Positives = 113/276 (40%)
Query: 8 ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQ 67
E + +T GH +A+ V F++ G S++ D+ +
Sbjct: 316 EVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQC--------IS 367
Query: 68 KFTGHEQGVSDLVFSSDS---RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
+FT + + F+ D LV+ DK I WD+ + ++ H V + F
Sbjct: 368 RFTNRKVPYC-VKFNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFV 426
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVL--PA-HSDPVTAVDFNRDGTMIVTSSYDGLC 181
++ VS + D+++R+W+ K + P+ HS P AV + +G + S D
Sbjct: 427 DENRRFVSTSDDKSLRVWEWDIPADFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQI 484
Query: 182 RIWDASTGHCM-KTLIDDENPPVSF---VKFSPNGKFILVGTLDNTLRLWNYSTGKILKT 237
I+ A + K I + + V FSP+ +++ G D L +W++ T K+
Sbjct: 485 LIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHR 544
Query: 238 YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
H K CIS+ + +++ D + LW+
Sbjct: 545 IKAH--DKVCISALWHPHETSKVITCGWDGQIKLWD 578
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 44/191 (23%), Positives = 78/191 (40%)
Query: 3 SDQSLESF--RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
SD+ + + R + Q + HL A++++ F + R S+S DK
Sbjct: 395 SDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKY 454
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGH--T 115
+ + S + ++L S D I ++ L K GH
Sbjct: 455 IAEPSMHSMPA-------VTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVA 507
Query: 116 NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVT 174
Y V+F+P + +VSG D + IWD KT K + AH ++A+ + + ++T
Sbjct: 508 GYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETSKVIT 567
Query: 175 SSYDGLCRIWD 185
+DG ++WD
Sbjct: 568 CGWDGQIKLWD 578
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 82/279 (29%), Positives = 138/279 (49%)
Query: 15 LTQTLNGHLRAISSVKF--SHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXX-LQKFTG 71
LT TL GH ++ + +D + SSS DK ++ TG
Sbjct: 8 LTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTG 67
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H VSD+V SSD +F +S S DKT+RLWD+ + I HT V V F+ + IV
Sbjct: 68 HNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIV 127
Query: 132 SGAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF---NRDGTMIVTSSYDGLCRIWDA 186
SG+ D+++++W+ +C + H+D V+ V F NRD +IV++ +D + ++W+
Sbjct: 128 SGSRDKSIKLWNT-LAQCKYTITDDCHTDWVSTVRFSPSNRD-PVIVSAGWDKVVKVWNL 185
Query: 187 STGHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
G+C +KT V+ V SP+G G D LW+ + GK L T G+
Sbjct: 186 --GNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND--- 240
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE 284
+ + S + +Y + + S + +W+L+ +K +++L+
Sbjct: 241 --VINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELK 277
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 75/263 (28%), Positives = 128/263 (48%)
Query: 71 GHEQGVSDLVF--SSDSRFLVSASDDKTIRLWDV---------PTATCLKTLIGHTNYVF 119
GH V+ + +D ++S+S DKTI +WDV P +++L GH ++V
Sbjct: 14 GHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVS 73
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V + +SG++D+T+R+WD+ G + +H+ V +V F+ D IV+ S D
Sbjct: 74 DVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDK 133
Query: 180 LCRIWDASTGHCMKTLIDDENPP-VSFVKFSPNGK--FILVGTLDNTLRLWNYSTGKILK 236
++W+ + C T+ DD + VS V+FSP+ + I+ D +++WN ++
Sbjct: 134 SIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKT 192
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296
+ GHT Y + T S +G SG +D LW+L K + L G+ VI+ S
Sbjct: 193 NHIGHTG--YVNTVTVS-PDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND--VINAMSF 247
Query: 297 PTENIIASGALDNDRTVKIWTQE 319
A+ + ++KIW E
Sbjct: 248 SPNRYWLCAAVGS--SIKIWDLE 268
Score = 199 (75.1 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 59/219 (26%), Positives = 106/219 (48%)
Query: 110 TLIGHTNYVFCVNFNPQSNM--IVSGAFDETVRIWDVKT---------GKCLKVLPAHSD 158
TL GHT +V + +++ ++S + D+T+ +WDV + G+ ++ L H+
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNH 70
Query: 159 PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218
V+ V + DG ++ S+D R+WD + G + I +S V FS + + I+ G
Sbjct: 71 FVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLS-VAFSADNRQIVSG 129
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN-GKYIVSGSEDSCVYLWELQSR 277
+ D +++LWN + + T T ++ + + FS +N IVS D V +W L +
Sbjct: 130 SRDKSIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNC 188
Query: 278 KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
++ GHT V +V P ++ ASG D +W
Sbjct: 189 RLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQ--AMLW 225
Score = 180 (68.4 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 61/228 (26%), Positives = 99/228 (43%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQG 75
T+ H + + SV FS D R + S S DK H
Sbjct: 104 TRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDC-------HTDW 156
Query: 76 VSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNMIV 131
VS + FS +R +VSA DK +++W++ C LKT IGHT YV V +P ++
Sbjct: 157 VSTVRFSPSNRDPVIVSAGWDKVVKVWNL--GNCRLKTNHIGHTGYVNTVTVSPDGSLCA 214
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
SG D +WD+ GK L LP + D + A+ F+ + + + + +IWD
Sbjct: 215 SGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLCAAVGSSI-KIWDLEDKKE 272
Query: 192 MKTLIDD---------ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
++ L + +P + +S +G+ + G DN +R++ S
Sbjct: 273 IEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQVS 320
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 82/279 (29%), Positives = 138/279 (49%)
Query: 15 LTQTLNGHLRAISSVKF--SHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXX-LQKFTG 71
LT TL GH ++ + +D + SSS DK ++ TG
Sbjct: 8 LTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTG 67
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H VSD+V SSD +F +S S DKT+RLWD+ + I HT V V F+ + IV
Sbjct: 68 HNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIV 127
Query: 132 SGAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF---NRDGTMIVTSSYDGLCRIWDA 186
SG+ D+++++W+ +C + H+D V+ V F NRD +IV++ +D + ++W+
Sbjct: 128 SGSRDKSIKLWNT-LAQCKYTITDDCHTDWVSTVRFSPSNRD-PVIVSAGWDKVVKVWNL 185
Query: 187 STGHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
G+C +KT V+ V SP+G G D LW+ + GK L T G+
Sbjct: 186 --GNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND--- 240
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE 284
+ + S + +Y + + S + +W+L+ +K +++L+
Sbjct: 241 --VINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELK 277
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 75/263 (28%), Positives = 128/263 (48%)
Query: 71 GHEQGVSDLVF--SSDSRFLVSASDDKTIRLWDV---------PTATCLKTLIGHTNYVF 119
GH V+ + +D ++S+S DKTI +WDV P +++L GH ++V
Sbjct: 14 GHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVS 73
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
V + +SG++D+T+R+WD+ G + +H+ V +V F+ D IV+ S D
Sbjct: 74 DVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDK 133
Query: 180 LCRIWDASTGHCMKTLIDDENPP-VSFVKFSPNGK--FILVGTLDNTLRLWNYSTGKILK 236
++W+ + C T+ DD + VS V+FSP+ + I+ D +++WN ++
Sbjct: 134 SIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKT 192
Query: 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296
+ GHT Y + T S +G SG +D LW+L K + L G+ VI+ S
Sbjct: 193 NHIGHTG--YVNTVTVS-PDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND--VINAMSF 247
Query: 297 PTENIIASGALDNDRTVKIWTQE 319
A+ + ++KIW E
Sbjct: 248 SPNRYWLCAAVGS--SIKIWDLE 268
Score = 199 (75.1 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 59/219 (26%), Positives = 106/219 (48%)
Query: 110 TLIGHTNYVFCVNFNPQSNM--IVSGAFDETVRIWDVKT---------GKCLKVLPAHSD 158
TL GHT +V + +++ ++S + D+T+ +WDV + G+ ++ L H+
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNH 70
Query: 159 PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218
V+ V + DG ++ S+D R+WD + G + I +S V FS + + I+ G
Sbjct: 71 FVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLS-VAFSADNRQIVSG 129
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN-GKYIVSGSEDSCVYLWELQSR 277
+ D +++LWN + + T T ++ + + FS +N IVS D V +W L +
Sbjct: 130 SRDKSIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNC 188
Query: 278 KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
++ GHT V +V P ++ ASG D +W
Sbjct: 189 RLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQ--AMLW 225
Score = 180 (68.4 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 61/228 (26%), Positives = 99/228 (43%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQG 75
T+ H + + SV FS D R + S S DK H
Sbjct: 104 TRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDC-------HTDW 156
Query: 76 VSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNMIV 131
VS + FS +R +VSA DK +++W++ C LKT IGHT YV V +P ++
Sbjct: 157 VSTVRFSPSNRDPVIVSAGWDKVVKVWNL--GNCRLKTNHIGHTGYVNTVTVSPDGSLCA 214
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
SG D +WD+ GK L LP + D + A+ F+ + + + + +IWD
Sbjct: 215 SGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLCAAVGSSI-KIWDLEDKKE 272
Query: 192 MKTLIDD---------ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
++ L + +P + +S +G+ + G DN +R++ S
Sbjct: 273 IEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQVS 320
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 258 (95.9 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 58/207 (28%), Positives = 96/207 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D T LWD+ T T GHT V ++ P
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ + VSGA D + ++WD++ G C + H + A+ F +G T S D CR++D
Sbjct: 196 TRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ D ++ V FS +G+ +L G D +W+ GH N
Sbjct: 256 RADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---DDGMAVATGSWDSFLKIW 339
Score = 231 (86.4 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 65/252 (25%), Positives = 117/252 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + +DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+ +KT G + + L H+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T +S + +P+ + + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQQTTTFAGHTGDVMS-LSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRK--VVQKLEGHTDPVISVASHPTENIIAS 304
I++ NG +GS+D+ L++L++ + +V + + SVA + ++ +
Sbjct: 229 -INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLA 287
Query: 305 GALDNDRTVKIW 316
G +D +W
Sbjct: 288 GY--DDFNCNVW 297
Score = 213 (80.0 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 55/217 (25%), Positives = 100/217 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D F GH
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTT--------FAGHTG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L + D+R VS + D + +LWD+ C +T GH + + + F P N +G+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L V +H + +T+V F++ G +++ D C +WD
Sbjct: 246 DDATCRLFDLRADQELMVY-SHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ L++WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 190 (71.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 50/211 (23%), Positives = 95/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I+ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+ GHT + S + + VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFAGHTGD---VMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + ++ P N A+G+ +D T +++
Sbjct: 225 HESDINAICFFPNGNAFATGS--DDATCRLF 253
Score = 61 (26.5 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQD 76
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 315 (115.9 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 70/252 (27%), Positives = 126/252 (50%)
Query: 66 LQKFTGHEQGVSDL-VFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+F H V+ L + SR L++ DD + LW + T +L GHT+ V V FN
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFN 67
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+ ++++GA +++WD++ K ++ H +AV+F+ G + + S D R+W
Sbjct: 68 SEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVW 127
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C++T +S ++FSP+G++++ G LDN +++W+ + GK+L + H
Sbjct: 128 DTRKKGCIQTY-KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP 186
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
I S + +GS D V W+L++ +++ V ++A HP +
Sbjct: 187 ---IRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFC 243
Query: 305 GALDNDRTVKIW 316
G LD+ V W
Sbjct: 244 G-LDDGLKVYSW 254
Score = 262 (97.3 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 73/268 (27%), Positives = 117/268 (43%)
Query: 6 SLESFRPYTLTQTLNGHLRAISSVKF-SHDGRLLASSSADKXXXXXXXXXXXXXXXXXXX 64
+L S T +L GH + SV F S + +LA +S+
Sbjct: 41 NLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSG---------VIKLWDLEESK 91
Query: 65 XLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
++ FTGH S + F FL S S D +R+WD C++T GHT + + F+
Sbjct: 92 MVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 151
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
P +VSG D V++WD+ GK L H P+ ++DF+ ++ T S D + W
Sbjct: 152 PDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFW 211
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D T + T E V + F P+G+ + G LD+ L++ YS ++ G +
Sbjct: 212 DLETFELIGTT-RPEATGVRAIAFHPDGQTLFCG-LDDGLKV--YSWEPVI-CRDG-VDM 265
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLW 272
+ F + GK+I + V +W
Sbjct: 266 GWSTLGDFCINEGKFIGCSYYRNSVGIW 293
Score = 208 (78.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 74/309 (23%), Positives = 136/309 (44%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ + GH S+V+F G LAS S+D +Q + GH +
Sbjct: 92 MVRAFTGHRSNCSAVEFHPFGEFLASGSSD--------TNLRVWDTRKKGCIQTYKGHTR 143
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
G+S + FS D R++VS D +++WD+ L H + ++F+P ++ +G+
Sbjct: 144 GISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGS 203
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D TV+ WD++T + + + V A+ F+ DG + DGL +++ C +
Sbjct: 204 ADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGL-KVYSWEPVIC-RD 261
Query: 195 LIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY-CISSTF 252
+D + F N GKFI N++ +W + L+ Y + K C+ F
Sbjct: 262 GVDMGWSTLG--DFCINEGKFIGCSYYRNSVGIWVSDISE-LEPYGAVSEDKNECMVKRF 318
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312
SV N + GS + ++R++ T ++VA +P ++ A+ L++ +
Sbjct: 319 SVLNDQSERMGSGPRGSVSPDYETREIKNIYVDSTGGNLNVAQNPG-SLKATLPLESGK- 376
Query: 313 VKIWTQEKE 321
V EK+
Sbjct: 377 VATMVSEKQ 385
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 256 (95.2 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 73/256 (28%), Positives = 124/256 (48%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + +S+DS+ LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G K + L AH+ ++ F D + IVTSS D C +WD
Sbjct: 113 ACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNS-IVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG KT+ + SP+ K + G D T +LW+ G +T++GH +
Sbjct: 172 ETGQ-QKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRK--VVQKLEGHTDPVISVASHPTENIIAS 304
I++ NG+ I +GS+D+ L++L++ + +V E + SVA + ++ +
Sbjct: 229 -INAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLLA 287
Query: 305 GALDNDRTVKIWTQEK 320
G +D IW K
Sbjct: 288 GY--DDFNCNIWDSLK 301
Score = 245 (91.3 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
D +V++S D T LWD+ T +GHT + +P + +SGA D T ++WD
Sbjct: 153 DDNSIVTSSGDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWD 212
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENP-- 201
V+ G C + H + A+ F +G I T S D CR++D + + E+
Sbjct: 213 VREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQEL-IVYSHESIIC 271
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
++ V FS +G+ +L G D +W+ + + +GH N C+ T +G +
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVT---ADGMAVA 328
Query: 262 SGSEDSCVYLW 272
+GS DS + +W
Sbjct: 329 TGSWDSFLKIW 339
Score = 216 (81.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 59/221 (26%), Positives = 100/221 (45%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK--FT 70
Y L +T G+++ +S +H G L D QK F
Sbjct: 124 YNL-KTREGNVK-VSRELSAHTGYLSCCRFLDDNSIVTSSGDTTCALWDIETGQQKTVFL 181
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH L S D + +S + D T +LWDV TC +T GH + + + F P I
Sbjct: 182 GHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAI 241
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+G+ D T R++D++ + L ++ +H +T+V F+R G +++ D C IWD+
Sbjct: 242 CTGSDDATCRLFDLRADQEL-IVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSL 300
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ L +N VS + + +G + G+ D+ L++WN
Sbjct: 301 KAERVGILSGHDNR-VSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 189 (71.6 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 49/211 (23%), Positives = 96/211 (45%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ ++++ S ++VS + D + +WD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F + I+ + D T
Sbjct: 109 GNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNS-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ + GHT C+S S + K +SG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQKTVFLGHTGD--CMSLAVS-PDFKLFISGACDATAKLWDVREGTCRQTFSG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + ++ P I +G+ +D T +++
Sbjct: 225 HESDINAICFFPNGEAICTGS--DDATCRLF 253
Score = 117 (46.2 bits), Expect = 0.00023, P = 0.00023
Identities = 34/136 (25%), Positives = 58/136 (42%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
R T QT +GH I+++ F +G + + S D L ++
Sbjct: 214 REGTCRQTFSGHESDINAICFFPNGEAICTGSDD--------ATCRLFDLRADQELIVYS 265
Query: 71 GHEQ---GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
HE G++ + FS R L++ DD +WD A + L GH N V C+
Sbjct: 266 -HESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTADG 324
Query: 128 NMIVSGAFDETVRIWD 143
+ +G++D ++IW+
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 62 (26.9 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ +S D +LL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWSTDSKLLVSASQD 76
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 309 (113.8 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 68/213 (31%), Positives = 112/213 (52%)
Query: 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163
T T +K L GH V+ F S+ ++S + D ++R WD+ + + H+ PV V
Sbjct: 331 TGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV 390
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
D + + S+D R+W + ++ + V VKF PN ++ G+ D T
Sbjct: 391 DISPFSLYFASGSHDRTARLWSFDRTYPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283
+RLW+ G ++ +TGH +S +FS NGKY+ S ED + LW+L S + ++L
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGP--VLSLSFS-PNGKYLASAGEDQRLKLWDLASGTLFKEL 506
Query: 284 EGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHTD + S+A P +IAS ++DN +V++W
Sbjct: 507 RGHTDSITSLAFSPDSGLIASASMDN--SVRVW 537
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 72/233 (30%), Positives = 115/233 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V F +DS L+S S+D +IR WD+ + T GH V+ V+ +P S
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYF 399
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
SG+ D T R+W L++ H V V F+ + + T S D R+W A G+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
++ L PV + FSPNGK++ D L+LW+ ++G + K GHT+S S
Sbjct: 460 SVR-LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDS--ITSL 516
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
FS +G I S S D+ V +W+++S +G + ++ V + N+++
Sbjct: 517 AFSPDSG-LIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLS 568
Score = 263 (97.6 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 70/261 (26%), Positives = 118/261 (45%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T + L GH + S +F D L S S D + GH
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--------YQGHA 384
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V D+ S S + S S D+T RLW L+ GH V CV F+P SN + +G
Sbjct: 385 YPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 444
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D+TVR+W + G +++ H PV ++ F+ +G + ++ D ++WD ++G K
Sbjct: 445 STDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFK 504
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY-----------STGKILKTYTGHT 242
L ++ + FSP+ I ++DN++R+W+ S+G+++ YTG
Sbjct: 505 EL-RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQM 563
Query: 243 NSKYCISSTFSVTNGKYIVSG 263
++ +S F N +V+G
Sbjct: 564 SN--VLSVQFMACN-LLLVTG 581
Score = 236 (88.1 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 71/249 (28%), Positives = 110/249 (44%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F EQ ++ SSDS+ L + D+ I+LW + + K L ++V +
Sbjct: 264 FYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRS----KKLKSEPHHV-----DTSRI 314
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+ +E D TG +K+L H PV + F D + +++ S D R WD
Sbjct: 315 RLACDTLEEEENEED-NTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-- 371
Query: 189 GHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
G T++ + PV V SP + G+ D T RLW++ L+ Y GH C
Sbjct: 372 GSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 431
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
+ F N Y+ +GS D V LW Q V+ GH PV+S++ P +AS
Sbjct: 432 VK--FH-PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAG- 487
Query: 308 DNDRTVKIW 316
D+ +K+W
Sbjct: 488 -EDQRLKLW 495
Score = 145 (56.1 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 49/218 (22%), Positives = 86/218 (39%)
Query: 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163
T C + + S ++ +G + +++W +++ K LK P H D + +
Sbjct: 257 TTICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSKK-LKSEPHHVD-TSRI 314
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
D + D GHC PV +F + +L + D +
Sbjct: 315 RLACDTLEEEENEEDNTGTEMKILRGHC---------GPVYSTRFLADSSGLLSCSEDMS 365
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCIS-STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282
+R W+ + Y GH + + S FS+ Y SGS D LW ++
Sbjct: 366 IRYWDLGSFTNTVLYQGHAYPVWDVDISPFSL----YFASGSHDRTARLWSFDRTYPLRI 421
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
GH V V HP N +A+G+ D+TV++W+ ++
Sbjct: 422 YAGHLADVDCVKFHPNSNYLATGS--TDKTVRLWSAQQ 457
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 309 (113.8 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 79/238 (33%), Positives = 125/238 (52%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH GV+ L F D L+S S DKTIR+W+ T+ C+ L GHT+ V C+ F+ S ++
Sbjct: 311 GHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLL 366
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VSG+ D TV++W GK + L H+ PV +V RD ++++ S D +IW T
Sbjct: 367 VSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT 425
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ T PV + + + F +LD T++ W+ K + T GH + I++
Sbjct: 426 CLHTF-SAHIGPVQSLALADSRLFSC--SLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAA 482
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
+ ++SG+ D V +WE + + V L+ H++PV SVA E + SG+ D
Sbjct: 483 -----DHLRLISGAHDGVVKVWE--ACECVHTLKNHSEPVTSVALGDCE--VVSGSED 531
Score = 308 (113.5 bits), Expect = 9.5e-27, P = 9.5e-27
Identities = 77/247 (31%), Positives = 132/247 (53%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH GV L + L S S D TIRLW++ T + L GH++ V C+ F+ Q +
Sbjct: 270 SGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD-QCKL 326
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
I SG+ D+T+RIW+ +T +C+ +L H+D V + F D T++V+ S D ++W S G
Sbjct: 327 I-SGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGG 383
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ + PV+ V+ + +L G+ D+T+++W+ T L T++ H +
Sbjct: 384 K--RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGP---VQ 438
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
S ++ + + + S S D + W+++ +K V L GH + V +A+ I SGA +
Sbjct: 439 S-LALADSR-LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLI--SGA--H 492
Query: 310 DRTVKIW 316
D VK+W
Sbjct: 493 DGVVKVW 499
Score = 258 (95.9 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 62/211 (29%), Positives = 114/211 (54%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170
L GH++ V C+ N++ SG++D T+R+W++ T + + +L HS VT + F D
Sbjct: 269 LSGHSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQC 324
Query: 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
+++ S D RIW+ T C+ +++ V + F + ++ G+ D T++LW++S
Sbjct: 325 KLISGSMDKTIRIWNYRTSECI-SILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFS 381
Query: 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV 290
GK + T GHT ++S + + ++SGS+DS + +W L++ + H PV
Sbjct: 382 GGKRI-TLRGHTGP---VNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPV 437
Query: 291 ISVASHPTENIIASGALDNDRTVKIWTQEKE 321
S+A ++ + S +LD T+K W EK+
Sbjct: 438 QSLAL--ADSRLFSCSLDG--TIKQWDIEKK 464
Score = 205 (77.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 61/203 (30%), Positives = 91/203 (44%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V L F DS LVS S D T++LW + TL GHT V V ++
Sbjct: 351 GHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLV 407
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+SG+ D T++IW ++T CL AH PV ++ D + + S DG + WD
Sbjct: 408 LSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL-ADSRLF-SCSLDGTIKQWDIEKKK 465
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C+ TL + + + ++ G D +++W + + T H+
Sbjct: 466 CVHTLFGHIE---GVWEIAADHLRLISGAHDGVVKVWEAC--ECVHTLKNHSEP------ 514
Query: 251 TFSVTNGKY-IVSGSEDSCVYLW 272
SV G +VSGSED +YLW
Sbjct: 515 VTSVALGDCEVVSGSEDGKIYLW 537
Score = 172 (65.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 52/167 (31%), Positives = 74/167 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
TL GH ++SV+ D L+ S S D L F+ H V
Sbjct: 387 TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTC--------LHTFSAHIGPVQ 438
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L + DSR L S S D TI+ WD+ C+ TL GH V+ ++SGA D
Sbjct: 439 SLALA-DSR-LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVW--EIAADHLRLISGAHDG 494
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
V++W+ +C+ L HS+PVT+V +V+ S DG +W
Sbjct: 495 VVKVWEAC--ECVHTLKNHSEPVTSVALG--DCEVVSGSEDGKIYLW 537
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 234 (87.4 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 57/177 (32%), Positives = 84/177 (47%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASS-SADKXXXXXXXXXXXXX--XXXXXXXLQKFTGH 72
T L GH +S + + L S+ SA+ L +GH
Sbjct: 241 TMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGH 300
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
Q V + F RFL SAS+D + RLWDV T L GH+ VF V+FN +++ S
Sbjct: 301 TQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLAS 360
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSD----PVTAVDFNRDGTMIVTSSYDGLCRIWD 185
D RIWD++TG+ + +L H D P+ A+D+ DG ++++S DG + WD
Sbjct: 361 AGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWD 417
Score = 208 (78.3 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 50/168 (29%), Positives = 85/168 (50%)
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
S++S L + + + LW + T L TL GHT V V+F+P + S + D + R+
Sbjct: 268 SAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRL 327
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDD 198
WDV+ L + HS V AV FN DG+++ ++ D + RIWD TG + L +D
Sbjct: 328 WDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDG 387
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT--YTGHTNS 244
P+ + + +G +L + D ++ W+ K+ +T HT++
Sbjct: 388 HIKPIYALDWGSDGHRVLSASADGWIKCWDVR--KVQRTGGVGAHTSA 433
Score = 146 (56.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 6 SLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXX 65
+L S T TL+GH + + V F GR LAS+S D
Sbjct: 284 NLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASED------TSWRLWDVEKRTELL 337
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNY----VFCV 121
LQ+ GH +GV + F+ D L SA D R+WD+ T + L GH + ++ +
Sbjct: 338 LQE--GHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYAL 395
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT 161
++ + ++S + D ++ WDV+ + + AH+ V+
Sbjct: 396 DWGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTSAVS 435
Score = 134 (52.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 37/153 (24%), Positives = 68/153 (44%)
Query: 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231
+ T +G +W S + TL V V F P+G+F+ + D + RLW+
Sbjct: 274 LATGGAEGQVNLWSLSQDTPLATL-SGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEK 332
Query: 232 GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD--- 288
L GH+ + +S F+ +G + S +DS +W+L++ + + L+GH D
Sbjct: 333 RTELLLQEGHSRGVFAVS--FN-GDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHI 389
Query: 289 -PVISVASHPTENIIASGALDNDRTVKIWTQEK 320
P+ ++ + + S + D +K W K
Sbjct: 390 KPIYALDWGSDGHRVLSASADG--WIKCWDVRK 420
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN--SKYCI--SSTFSVTN-- 256
+S + SPNG+ + G ++L++ GHTN S C +T +N
Sbjct: 209 ISITRISPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVS 268
Query: 257 --GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314
+ +G + V LW L + L GHT V V HP+ +AS + D + +
Sbjct: 269 AESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASAS--EDTSWR 326
Query: 315 IWTQEK 320
+W EK
Sbjct: 327 LWDVEK 332
Score = 98 (39.6 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 256 NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKI 315
+G ++VS D V ++ +VQ L GHT PV SV I SG +DRTVK+
Sbjct: 465 SGTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGG--HDRTVKL 522
Query: 316 W 316
W
Sbjct: 523 W 523
Score = 89 (36.4 bits), Expect = 6.8e-26, Sum P(2) = 6.8e-26
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 167 RDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRL 226
+ GT +V+S +D I+ A +++L PV+ V S +G++I+ G D T++L
Sbjct: 464 KSGTFLVSSGFDHKVNIYSADDWALVQSL-SGHTGPVASVDVSRDGRWIVSGGHDRTVKL 522
Query: 227 WNYSTGK 233
W + G+
Sbjct: 523 WGRNDGE 529
Score = 77 (32.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 211 NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVY 270
+G F++ D+ + +++ ++++ +GHT ++S +G++IVSG D V
Sbjct: 465 SGTFLVSSGFDHKVNIYSADDWALVQSLSGHTGP---VASVDVSRDGRWIVSGGHDRTVK 521
Query: 271 LW 272
LW
Sbjct: 522 LW 523
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 306 (112.8 bits), Expect = 7.9e-27, P = 7.9e-27
Identities = 88/318 (27%), Positives = 143/318 (44%)
Query: 5 QSLESFRPYTLTQTLNGHLRAI-SSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXX 63
+ +E P + +++ ++ S FS D L S S D
Sbjct: 195 EQIEERYPTMMARSIKFSTKSYPESAVFSPDANYLVSGSKDGFIEVWNYMNGKLRKDLKY 254
Query: 64 XXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVN 122
+ V + FS DS L + S D I++W V T CL+ HT V V
Sbjct: 255 QAQDNLMMMDAAVRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVR 314
Query: 123 FNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
F+ ++ I+SG D VR+ +K+GKCLK + HS +T V ++ +G I++ S DG R
Sbjct: 315 FSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIR 374
Query: 183 IWDASTGHCMKTL-IDDENPPVSFVKFSPNGK--FILVGTLDNTLRLWNYSTGKILKTYT 239
+W +G C+ T + E+ P+ V P ++V NTL + N S G++++T T
Sbjct: 375 VWHGKSGECLSTFRVGSEDYPILNVIPIPKSDPPQMIVCNRSNTLYVVNIS-GQVVRTMT 433
Query: 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299
K + G++ + +ED +Y + + S + L I +A HP +
Sbjct: 434 SGKREKGDFINCILSPKGEWAYAIAEDGVMYCFMVLSGTLETTLPVTERLPIGLAHHPHQ 493
Query: 300 NIIASGALDNDRTVKIWT 317
N+IAS A D +K+WT
Sbjct: 494 NLIASYA--EDGLLKLWT 509
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 306 (112.8 bits), Expect = 8.1e-27, P = 8.1e-27
Identities = 86/322 (26%), Positives = 143/322 (44%)
Query: 4 DQSLESFRPYTLTQTLN-GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXX 62
D E F P L + + G + +FS DG+ L + S D
Sbjct: 195 DVEEERF-PTQLARHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLK 253
Query: 63 XXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCV 121
F + V + FS D+ L + + D I++W + + CL+ H+ V C+
Sbjct: 254 YQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCL 313
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+F+ S I+S +FD+T+RI +K+GKCLK HS V DG +++S DG
Sbjct: 314 SFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTV 373
Query: 182 RIWDASTGHCMKTLID-----DENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKIL 235
++W+ T C T + V+ V P N + +V NT+ + N G+I+
Sbjct: 374 KVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSNTVVIMNMQ-GQIV 432
Query: 236 KTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294
++++ G + T S G++I ED +Y + + K+ + L H VI +A
Sbjct: 433 RSFSSGKREGGDFVCCTLS-PRGEWIYCVGEDYVLYCFSTVTGKLERTLTVHEKDVIGIA 491
Query: 295 SHPTENIIASGALDNDRTVKIW 316
HP +N+I G D +K+W
Sbjct: 492 HHPHQNLI--GTYSEDGLLKLW 511
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 46/168 (27%), Positives = 78/168 (46%)
Query: 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDDE----NPPVSFVKFSPNG 212
V F+ DG +VT S DG +W+ +TG K L D + V + FS +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDT 276
Query: 213 KFILVGTLDNTLRLWNYSTGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
+ + G D +++W +G+ L+ Y H+ C+S FS + I+S S D + +
Sbjct: 277 EMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLS--FS-KDSTQILSASFDQTIRI 333
Query: 272 WELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319
L+S K +++ GH+ V P + S + +D TVK+W +
Sbjct: 334 HGLKSGKCLKEFRGHSSFVNEATLTPDGHHAISAS--SDGTVKVWNMK 379
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 307 (113.1 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 78/264 (29%), Positives = 117/264 (44%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH-E 73
L QTL GH + V G + + TGH
Sbjct: 295 LKQTLRGHASYVGGVAL-RPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMP 353
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
VS + F RFL +A D + RLWD+ T + GH V C++++ +++V+G
Sbjct: 354 HRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTG 413
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
D R+WD++TG+C+ L H V VDF+ +G I T S D C+IWD +
Sbjct: 414 GLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVY 473
Query: 194 TLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
T+ N +S VK+ G F++ + D+T ++W+ T + LKT GH N + S
Sbjct: 474 TIPAHTNL-ISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNK---VISVD 529
Query: 253 SVTNGKYIVSGSEDSCVYLWELQS 276
N +YI + S D LW S
Sbjct: 530 IAPNSQYIATTSFDRTFKLWSPDS 553
Score = 306 (112.8 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 90/324 (27%), Positives = 145/324 (44%)
Query: 5 QSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXX 64
+ L+S P +Q G R +SS FS D LL +SS
Sbjct: 246 KKLQSLAPLC-SQV--GDTRPVSSAAFSEDSSLLLTSS--------WSGLCKLWSVPDCE 294
Query: 65 XLQKFTGHEQGVSDLVF----SSDSRFLV---SASDDKTIRLWDVPTATCLKTLIGHTNY 117
Q GH V + +D +V S D ++LW + + GH +
Sbjct: 295 LKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPH 354
Query: 118 -VFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS 176
V V F+P + + +D + R+WD++ + H+ PV + ++ DG+++VT
Sbjct: 355 RVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGG 414
Query: 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236
D R+WD TG C+ L + V V FSPNG I G+ DNT ++W+ + +
Sbjct: 415 LDAFGRVWDLRTGRCIMFL-EGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVY 473
Query: 237 TYTGHTNSKYCISST-FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
T HTN IS + G ++V+ S DS +W ++ + ++ L+GH + VISV
Sbjct: 474 TIPAHTN---LISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDI 530
Query: 296 HPTENIIASGALDNDRTVKIWTQE 319
P IA+ + D RT K+W+ +
Sbjct: 531 APNSQYIATTSFD--RTFKLWSPD 552
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 85/302 (28%), Positives = 144/302 (47%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L GH I S KF+ G LAS +DK GH+ + +
Sbjct: 58 LIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSV-------LKGHKGTILE 110
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-FCVNFNPQSNMIVSGAFDE 137
L +S+DS + +A DK+I +WD +K + H+ V C ++ SG+ D
Sbjct: 111 LHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDR 170
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
+ RI+D ++ K L H PVT+V F+ ++T D + R+WD +
Sbjct: 171 SARIFDTRS-KGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLA 229
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWN---YST-GKILKTYTGHTNS--KYCISST 251
++ S +G ++L ++DN+ ++W+ Y+ + +KT+ G N+ K I S+
Sbjct: 230 SHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSS 289
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311
+S+ +G+ I GS D VY+W+ ++++ L GH+ V V HP E IIAS +D+
Sbjct: 290 WSI-DGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIAS--CSSDK 346
Query: 312 TV 313
T+
Sbjct: 347 TI 348
Score = 210 (79.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 61/215 (28%), Positives = 104/215 (48%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK--TLIGHTNYVFCVNF 123
+ + GH+ + F+S L S DK I LW+V C+ L GH + +++
Sbjct: 55 IMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNV-YGECINYSVLKGHKGTILELHW 113
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS-SYDGLCR 182
+ SN I + D+++ +WD G+ +K + HS V + R G +V S S D R
Sbjct: 114 STDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSAR 173
Query: 183 IWDA-STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI-LKTYTG 240
I+D S G T + PV+ V FS ++ G +DN +R+W+ + L T
Sbjct: 174 IFDTRSKG---STHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLAS 230
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275
H ++ I+ST +G Y++S S D+ +W+++
Sbjct: 231 HQDT---ITSTSVSKDGAYLLSNSMDNSCKIWDIR 262
Score = 205 (77.2 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 54/196 (27%), Positives = 100/196 (51%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+ S SDD++ R++D + L H V V F+ S+ +++G D +R+WD++
Sbjct: 163 VASGSDDRSARIFDTRSKGSTH-LFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQ 221
Query: 148 KC-LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD----ASTGHCMKTLIDDENP- 201
+ L L +H D +T+ ++DG ++++S D C+IWD A +KT +N
Sbjct: 222 EDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNF 281
Query: 202 PVSFVK--FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259
+ +K +S +G+ I G+ D + +W+ +T ++ GH+ + + TF N
Sbjct: 282 EKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEV--TFH-PNEPI 338
Query: 260 IVSGSEDSCVYLWELQ 275
I S S D +YL E++
Sbjct: 339 IASCSSDKTIYLGEIK 354
>TAIR|locus:2153443 [details] [associations]
symbol:AT5G54200 "AT5G54200" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB013387 HOGENOM:HOG000239143 IPI:IPI00537060
RefSeq:NP_200231.1 UniGene:At.27971 ProteinModelPortal:Q9FK21
SMR:Q9FK21 PRIDE:Q9FK21 EnsemblPlants:AT5G54200.1 GeneID:835508
KEGG:ath:AT5G54200 TAIR:At5g54200 InParanoid:Q9FK21 OMA:KERRSTD
PhylomeDB:Q9FK21 ProtClustDB:CLSN2916439 Genevestigator:Q9FK21
Uniprot:Q9FK21
Length = 825
Score = 271 (100.5 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 71/218 (32%), Positives = 116/218 (53%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-QS 127
F GH V DL +S S+ L+S+S DKT+RLWD+ + TCLK + H++YV C+ FNP
Sbjct: 464 FVGHLDDVLDLSWSK-SQHLLSSSMDKTVRLWDLSSKTCLK-VFSHSDYVTCIQFNPVDD 521
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
N +SG+ D VRIW + + + H + VTA + DG + SY G C +++
Sbjct: 522 NYFISGSLDAKVRIWSIPDHQVVDWNDLH-EMVTAACYTPDGQGALVGSYKGTCCLYNTH 580
Query: 188 TGHCMKTL-IDDEN-------PPVSFVKF-SPNGKFILVGTLDNTLRLWNYSTGKILKTY 238
+ I+ +N ++ +F + + +LV + D+ R+ ++ +
Sbjct: 581 DNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRV--VDGVDLVHKF 638
Query: 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
G N+ IS++ + +NGK++VS SEDS VY+W S
Sbjct: 639 KGFRNTNSQISASLT-SNGKFLVSASEDSNVYVWNYDS 675
Score = 180 (68.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 52/218 (23%), Positives = 104/218 (47%)
Query: 110 TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-D 168
+ +GH + V ++++ +S ++S + D+TVR+WD+ + CLKV +HSD VT + FN D
Sbjct: 463 SFVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVD 520
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
++ S D RIW + +D + V+ ++P+G+ LVG+ T L+N
Sbjct: 521 DNYFISGSLDAKVRIWSIPDHQVVDW--NDLHEMVTAACYTPDGQGALVGSYKGTCCLYN 578
Query: 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV-----VQKL 283
K+ + + ++ + +T +++ S + V + ++R V V K
Sbjct: 579 THDNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRVVDGVDLVHKF 638
Query: 284 EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321
+G + +++ T N + D V +W + +
Sbjct: 639 KGFRNTNSQISASLTSNGKFLVSASEDSNVYVWNYDSD 676
Score = 72 (30.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102
Q+ H+ + + FS D R+L SA +D I++W V
Sbjct: 357 QEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
Score = 66 (28.3 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 16 TQTLNGHLRAISSVKFSHDGRLLASSSAD 44
+Q + H +I S+KFS DGR LAS+ D
Sbjct: 356 SQEIQAHKGSIWSIKFSLDGRYLASAGED 384
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 271 (100.5 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 63/207 (30%), Positives = 104/207 (50%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ H +S F +D R +V++S D T LWDV T + H V V+ +P
Sbjct: 144 RELNSHTGYLSCCRFLND-RQIVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPD 202
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
N +SGA D T ++WD+++GKC++ H + AV + +G T S D CR++D
Sbjct: 203 KNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDI 262
Query: 187 STGH-CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
M+ D+ ++ V FS +G+F+ G D T +W+ G+ + + TGH N
Sbjct: 263 RADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGNRV 322
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T+G + +GS DS + +W
Sbjct: 323 SCLGVP---TDGMALCTGSWDSLLKIW 346
Score = 229 (85.7 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 59/216 (27%), Positives = 110/216 (50%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + ++ D+ LVSAS D + +WD T + + +++V ++P +N +
Sbjct: 60 GHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTANFV 119
Query: 131 VSGAFDETVRIWDVKTG----KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++++ + + L +H+ ++ F D IVTSS D C +WD
Sbjct: 120 ACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLND-RQIVTSSGDMTCILWDV 178
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
G + T D N V V SP+ + + G D T +LW+ +GK ++T+TGH
Sbjct: 179 ENGTKI-TEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEAD-- 235
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQS-RKVVQ 281
I++ NG +GS+D+ L+++++ R+++Q
Sbjct: 236 -INAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQ 270
Score = 190 (71.9 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 52/220 (23%), Positives = 97/220 (44%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
+P + + LN H +S +F +D R + +SS D + +F+
Sbjct: 138 QPIRVCRELNSHTGYLSCCRFLND-RQIVTSSGDMTCILWDVENGTK--------ITEFS 188
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
H V + S D + +S + D T +LWD+ + C++T GH + V + P
Sbjct: 189 DHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSF 248
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+G+ D + R++D++ + L H + +T+V F+ G + D C +WD
Sbjct: 249 GTGSDDASCRLFDIRADRELMQY-THDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTL 307
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
G + +L N VS + +G + G+ D+ L++W
Sbjct: 308 KGERVLSLTGHGNR-VSCLGVPTDGMALCTGSWDSLLKIW 346
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/173 (26%), Positives = 76/173 (43%)
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
K + L H + A+ + D +V++S DG +WD T + + I + V
Sbjct: 53 KVRRNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHA-IPLRSSWVMTCA 111
Query: 208 FSPNGKFILVGTLDNTLRLWNYSTG----KILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263
+SP F+ G LDN ++N + ++ + HT C N + IV+
Sbjct: 112 YSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCR----FLNDRQIVTS 167
Query: 264 SEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
S D LW++++ + + H V+SV+ P +N SGA D T K+W
Sbjct: 168 SGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACD--ATAKLW 218
Score = 153 (58.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/210 (20%), Positives = 91/210 (43%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+ L GH ++ +++ + +VS + D + +WD T + +P S V ++
Sbjct: 56 RNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPT 115
Query: 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP--NGKFILVGTLDNTLRL 226
+ D +C I++ + + + N ++ N + I+ + D T L
Sbjct: 116 ANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTSSGDMTCIL 175
Query: 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH 286
W+ G + ++ H +S + + Y +SG+ D+ LW+L+S K VQ GH
Sbjct: 176 WDVENGTKITEFSDHNGDVMSVSVS---PDKNYFISGACDATAKLWDLRSGKCVQTFTGH 232
Query: 287 TDPVISVASHPTENIIASGALDNDRTVKIW 316
+ +V P N ++ G +D + +++
Sbjct: 233 EADINAVQYFP--NGLSFGTGSDDASCRLF 260
Score = 44 (20.5 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+ L GHL I ++ ++ D L S+S D
Sbjct: 56 RNLKGHLAKIYAMHWAEDNVHLVSASQD 83
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 308 (113.5 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 70/257 (27%), Positives = 125/257 (48%)
Query: 66 LQKFTGHEQGVSDLVFS-SDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + +W V C+ +L GHT + + +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+ +IV+G+ ++R+WD++ K L+ L H + ++DF+ G+ + + S D ++W
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ V ++FSP+GK++ D+T++LW+ + GK++ +TGH
Sbjct: 133 DVRRKGCIFKY-KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH--- 188
Query: 245 KYCISSTFSVTNGKYIVSGSE-DSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
Y + +Y ++GS + W+L+ VV +E PV + +P +
Sbjct: 189 -YGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 247
Query: 304 SGALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 248 GGFQDSLR-VYGWEPER 263
Score = 233 (87.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 59/212 (27%), Positives = 92/212 (43%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH I S++ S L+ + S L+ GH+ +
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQS--------GSIRVWDLEAAKILRTLLGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWDV C+ HT V C+ F+P + S A D
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID 197
TV++WD+ GK + H PV V+F+ + S R WD H + + I+
Sbjct: 170 TVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVV-SCIE 228
Query: 198 DENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229
+E PV + F+P+G L G ++LR++ +
Sbjct: 229 EEATPVRCILFNPDG-CCLYGGFQDSLRVYGW 259
Score = 186 (70.5 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 49/182 (26%), Positives = 76/182 (41%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + K+ H Q
Sbjct: 97 ILRTLLGHKANICSLDFHPYGSFVASGSLD--------TDIKLWDVRRKGCIFKYKSHTQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GH V V F+P +
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSP 208
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
T+R WD++ + + + PV + FN DG + D L R++ C
Sbjct: 209 VHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERCFDV 267
Query: 195 LI 196
++
Sbjct: 268 VV 269
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 276 (102.2 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 75/249 (30%), Positives = 125/249 (50%)
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
+GH ++ + + + ++ S+S DKTIR+WD CL L GH V ++ + + ++
Sbjct: 266 SGHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTE-HV 323
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
+ SGA+D T D K + A + G +V++S D +WD
Sbjct: 324 LRSGAYDHT----DFKPKSFSDERRKAKERYEAC-LKQSGERLVSASDDLQLILWDPQKS 378
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY-CI 248
T + V+ FSP+G+ I + D+++RLW+ TGK L T GH + Y C
Sbjct: 379 TKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCA 438
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
ST S + +VS S+D+ + +W+++S+K+ L GH D V +V P +ASG D
Sbjct: 439 WSTDS----RLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGAD 494
Query: 309 NDRTVKIWT 317
+ V+IW+
Sbjct: 495 --KAVRIWS 501
Score = 251 (93.4 bits), Expect = 9.0e-21, P = 9.0e-21
Identities = 64/223 (28%), Positives = 111/223 (49%)
Query: 107 CLKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165
C ++ GH + F+P S+ +V+G+ D T R+WD T + + H++ V+ V +
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAW 185
Query: 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP------NGKFILV-G 218
D ++I T S D R WD G + + P+ + + P +G ++L G
Sbjct: 186 APDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASG 245
Query: 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ DNT+R+WN +L T +GHT C+ + N +I S S D + +W+ + K
Sbjct: 246 SKDNTVRIWNVKLRTLLFTLSGHTAPITCVR--WGGQN--WIYSSSYDKTIRIWDAKDGK 301
Query: 279 VVQKLEGHTDPVISVASHPTENIIASGALDN-DRTVKIWTQEK 320
+ L+GH V + S TE+++ SGA D+ D K ++ E+
Sbjct: 302 CLHILKGHAARVNHL-SLSTEHVLRSGAYDHTDFKPKSFSDER 343
Score = 243 (90.6 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 63/200 (31%), Positives = 99/200 (49%)
Query: 71 GHEQGVSDLVFS-SDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM 129
GH+ + FS S S LV+ S D T RLWD T T + T+ GHTN+V CV + P +++
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASI 191
Query: 130 IVSGAFDETVRIWDVKTGKCL-KVLPAHSDPVTAVDFNR------DGTMIVTS-SYDGLC 181
I +G+ D T+R WD K G + L H+ P+ A+ + G ++ S S D
Sbjct: 192 IATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTV 251
Query: 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
RIW+ + TL P++ V++ +I + D T+R+W+ GK L GH
Sbjct: 252 RIWNVKLRTLLFTL-SGHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAKDGKCLHILKGH 309
Query: 242 TN--SKYCISSTFSVTNGKY 259
+ +S+ + +G Y
Sbjct: 310 AARVNHLSLSTEHVLRSGAY 329
Score = 222 (83.2 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 45/119 (37%), Positives = 68/119 (57%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
+ K GH++ V+ FS D R + +AS D ++RLWD T L TL GH V+ ++
Sbjct: 382 ITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWST 441
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
S ++VS + D T+++WDV++ K LP H D V AVD++ DG + + D RIW
Sbjct: 442 DSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 218 (81.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 49/143 (34%), Positives = 76/143 (53%)
Query: 88 LVSASDDKTIRLWDVPTATC-LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT 146
LVSASDD + LWD +T + + GH V +F+P I + +FD +VR+WD KT
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKT 420
Query: 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFV 206
GK L L H V ++ D ++V+SS D ++WD + MK + V V
Sbjct: 421 GKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKK-MKFDLPGHEDQVFAV 479
Query: 207 KFSPNGKFILVGTLDNTLRLWNY 229
+SP+G+ + G D +R+W++
Sbjct: 480 DWSPDGQRVASGGADKAVRIWSH 502
Score = 184 (69.8 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 44/135 (32%), Positives = 67/135 (49%)
Query: 8 ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQ 67
+S +P T ++GH + ++ FS DGR +A++S D L
Sbjct: 377 KSTKPIT---KMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKF--------LA 425
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
GH V +S+DSR LVS+S D T+++WDV + L GH + VF V+++P
Sbjct: 426 TLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDG 485
Query: 128 NMIVSGAFDETVRIW 142
+ SG D+ VRIW
Sbjct: 486 QRVASGGADKAVRIW 500
Score = 184 (69.8 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 51/175 (29%), Positives = 85/175 (48%)
Query: 148 KCLKVLPAHSDPVTAVDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFV 206
+C + H + + F+ + +VT S D R+WD T + T+ N VS V
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNW-VSCV 183
Query: 207 KFSPNGKFILVGTLDNTLRLWNYSTGK-ILKTYTGHTNS--KYCISST-FSVTNGKYIV- 261
++P+ I G++DNT+R W+ G I HT C + +G Y++
Sbjct: 184 AWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLA 243
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
SGS+D+ V +W ++ R ++ L GHT P+ V +N I S + D +T++IW
Sbjct: 244 SGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVR-WGGQNWIYSSSYD--KTIRIW 295
Score = 49 (22.3 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSAD 44
T+ GH +S V ++ D ++A+ S D
Sbjct: 172 TMKGHTNWVSCVAWAPDASIIATGSMD 198
Score = 45 (20.9 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADK 45
TL TL+GH I+ V++ + SSS DK
Sbjct: 260 TLLFTLSGHTAPITCVRWGGQNWIY-SSSYDK 290
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 200 (75.5 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 42/117 (35%), Positives = 64/117 (54%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF-NPQSNM 129
GH + V+ + F+ D +VS DD+T+R+WDV CL TL GH+ VF NF N +
Sbjct: 45 GHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHSTNVFATNFLNNDNRK 104
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF-NRDGTMIVTSSYDGLCRIWD 185
++SG D +R +D++ KC V HS V + + ++SS DG R++D
Sbjct: 105 VISGGNDADIRYYDIENQKCT-VYKHHSKKVLKLSVCPTQPQVFLSSSSDGSVRLFD 160
Score = 167 (63.8 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 45/126 (35%), Positives = 62/126 (49%)
Query: 106 TCLKT-LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164
T KT L GH V +NFN ++IVSG DETVRIWDV KCL L HS V A +
Sbjct: 37 TLEKTELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHSTNVFATN 96
Query: 165 F-NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG-KFILVGTLDN 222
F N D +++ D R +D C T+ + V + P + L + D
Sbjct: 97 FLNNDNRKVISGGNDADIRYYDIENQKC--TVYKHHSKKVLKLSVCPTQPQVFLSSSSDG 154
Query: 223 TLRLWN 228
++RL++
Sbjct: 155 SVRLFD 160
Score = 165 (63.1 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 236 KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
+ Y+GH + + S F N +YIVSGS+DS +++W+ +S K+V+ LEGH V SV
Sbjct: 771 QVYSGHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVRILEGHDSHVNSVVC 830
Query: 296 HPTENIIASGALDNDRTVKIWTQEKE 321
HP E IA+ +D + +W KE
Sbjct: 831 HPNEPCIATSGIDP--YICLWEPTKE 854
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 28/117 (23%), Positives = 62/117 (52%)
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
KT + N V+ + F+ +G I+ G D T+R+W+ K L T GH+ + + ++ F
Sbjct: 40 KTELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHSTNVF--ATNF 97
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE-NIIASGALD 308
+ + ++SG D+ + ++++++K + H+ V+ ++ PT+ + S + D
Sbjct: 98 LNNDNRKVISGGNDADIRYYDIENQKCTV-YKHHSKKVLKLSVCPTQPQVFLSSSSD 153
Score = 122 (48.0 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 1 MSSDQSLESFRPYTLTQT-LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
+ + S ++ TL +T L+GH ++S+ F+ DG L+ S D+
Sbjct: 24 LKDEFSKSNYAIETLEKTELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKC-- 81
Query: 60 XXXXXXLQKFTGHEQGVSDLVF-SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV 118
L GH V F ++D+R ++S +D IR +D+ C H+ V
Sbjct: 82 ------LTTLYGHSTNVFATNFLNNDNRKVISGGNDADIRYYDIENQKCT-VYKHHSKKV 134
Query: 119 FCVNFNP-QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDG 169
++ P Q + +S + D +VR++DV+ LK P+ N DG
Sbjct: 135 LKLSVCPTQPQVFLSSSSDGSVRLFDVR----LKYKDTEIQPIQTAPSNNDG 182
Score = 117 (46.2 bits), Expect = 0.00092, P = 0.00092
Identities = 34/124 (27%), Positives = 58/124 (46%)
Query: 153 LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN- 211
L H++ V +++FN DG++IV+ D RIWD C+ TL + V F N
Sbjct: 43 LHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYG-HSTNVFATNFLNND 101
Query: 212 GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271
+ ++ G D +R ++ K Y H SK + + T + +S S D V L
Sbjct: 102 NRKVISGGNDADIRYYDIENQKCT-VYKHH--SKKVLKLSVCPTQPQVFLSSSSDGSVRL 158
Query: 272 WELQ 275
++++
Sbjct: 159 FDVR 162
Score = 84 (34.6 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 208 FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
+ PN ++I+ G+ D+ L +W+ + KI++ GH + ++S N I + D
Sbjct: 788 YGPNSEYIVSGSDDSKLFIWDKESAKIVRILEGHDSH---VNSVVCHPNEPCIATSGIDP 844
Query: 268 CVYLWE 273
+ LWE
Sbjct: 845 YICLWE 850
Score = 58 (25.5 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 160 VTAVDFNR-DGTMIVTSSYDGLCRIWDAST--GHCMKTLIDD-ENPPVSFVK-------- 207
+ +V+++ DG +T+S DG R++D H ++ ++ N V F
Sbjct: 272 IFSVEYHPFDGYSFITASSDGTVRLFDQRMIPNHSSESFVNIYRNIEVPFPSEDEATGCA 331
Query: 208 FSPNGKFILVGTLDNTLRLW----NYSTGKILKTYTGHTN 243
FS NG I+V L++ + L+ NYS L + ++N
Sbjct: 332 FSKNGNEIVVTYLNDNIYLYDLKKNYSKEYSLDYFKDYSN 371
Score = 57 (25.1 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 160 VTAVDF-NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218
+ +V+F + IV+ S D IWD + ++ +++ + V+ V PN I
Sbjct: 782 IKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVR-ILEGHDSHVNSVVCHPNEPCIATS 840
Query: 219 TLDNTLRLW 227
+D + LW
Sbjct: 841 GIDPYICLW 849
Score = 42 (19.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 84 DSRFLVSASDDKTIRLWD 101
D ++AS D T+RL+D
Sbjct: 281 DGYSFITASSDGTVRLFD 298
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 254 (94.5 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 58/208 (27%), Positives = 100/208 (48%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ + H +S F D+ +V++S D T LWD+ T +GHT + +P
Sbjct: 137 RELSAHTGYLSCCRFLDDNN-IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ +SGA D + ++WDV+ G C + H + A+ F +G I T S D CR++D
Sbjct: 196 FKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDL 255
Query: 187 STGHCMKTLIDDENP--PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
+ T DE+ ++ V FS +G+ + G D +W+ G+ + +GH N
Sbjct: 256 RADQEL-TAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNR 314
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 315 VSCLGVT---ADGMAVATGSWDSFLKVW 339
Score = 245 (91.3 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 73/259 (28%), Positives = 124/259 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + +++DS+ LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+ +K+ G K + L AH+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG KT+ + SP+ K + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI-----SVASHPTENI 301
I++ NG+ I +GS+D+ L++L++ Q+L ++D I SVA + +
Sbjct: 229 -INAICFFPNGEAICTGSDDASCRLFDLRAD---QELTAYSDESIICGITSVAFSLSGRL 284
Query: 302 IASGALDNDRTVKIWTQEK 320
+ +G +D IW K
Sbjct: 285 LFAGY--DDFNCNIWDSMK 301
Score = 203 (76.5 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 48/165 (29%), Positives = 82/165 (49%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F GH L S D + +S + D + +LWDV TC +T GH + + + F P
Sbjct: 180 FVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-----VTAVDFNRDGTMIVTSSYDGLCRI 183
I +G+ D + R++D++ + L A+SD +T+V F+ G ++ D C I
Sbjct: 240 AICTGSDDASCRLFDLRADQ---ELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNI 296
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
WD+ G + L +N VS + + +G + G+ D+ L++WN
Sbjct: 297 WDSMKGERVGILSGHDNR-VSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 179 (68.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 47/203 (23%), Positives = 89/203 (43%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + +WD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I+ + G+ + + +S +F + I+ + D T
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ + GHT C+S S + K +SG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQKTVFVGHTGD--CMSLAVS-PDFKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALD 308
H + ++ P I +G+ D
Sbjct: 225 HESDINAICFFPNGEAICTGSDD 247
Score = 144 (55.7 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC----VN 122
Q FTGHE ++ + F + + + SDD + RL+D+ L + + C V
Sbjct: 220 QTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDES--IICGITSVA 277
Query: 123 FNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
F+ ++ +G D IWD G+ + +L H + V+ + DG + T S+D +
Sbjct: 278 FSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLK 337
Query: 183 IWD 185
+W+
Sbjct: 338 VWN 340
Score = 59 (25.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ ++ D +LL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQD 76
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 254 (94.5 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 58/208 (27%), Positives = 100/208 (48%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ + H +S F D+ +V++S D T LWD+ T +GHT + +P
Sbjct: 137 RELSAHTGYLSCCRFLDDNN-IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ +SGA D + ++WDV+ G C + H + A+ F +G I T S D CR++D
Sbjct: 196 FKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDL 255
Query: 187 STGHCMKTLIDDENP--PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
+ T DE+ ++ V FS +G+ + G D +W+ G+ + +GH N
Sbjct: 256 RADQEL-TAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNR 314
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 315 VSCLGVT---ADGMAVATGSWDSFLKVW 339
Score = 245 (91.3 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 73/259 (28%), Positives = 124/259 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + +++DS+ LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+ +K+ G K + L AH+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG KT+ + SP+ K + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI-----SVASHPTENI 301
I++ NG+ I +GS+D+ L++L++ Q+L ++D I SVA + +
Sbjct: 229 -INAICFFPNGEAICTGSDDASCRLFDLRAD---QELTAYSDESIICGITSVAFSLSGRL 284
Query: 302 IASGALDNDRTVKIWTQEK 320
+ +G +D IW K
Sbjct: 285 LFAGY--DDFNCNIWDSMK 301
Score = 203 (76.5 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 48/165 (29%), Positives = 82/165 (49%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F GH L S D + +S + D + +LWDV TC +T GH + + + F P
Sbjct: 180 FVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-----VTAVDFNRDGTMIVTSSYDGLCRI 183
I +G+ D + R++D++ + L A+SD +T+V F+ G ++ D C I
Sbjct: 240 AICTGSDDASCRLFDLRADQ---ELTAYSDESIICGITSVAFSLSGRLLFAGYDDFNCNI 296
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
WD+ G + L +N VS + + +G + G+ D+ L++WN
Sbjct: 297 WDSMKGERVGILSGHDNR-VSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 179 (68.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 47/203 (23%), Positives = 89/203 (43%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + +WD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I+ + G+ + + +S +F + I+ + D T
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ + GHT C+S S + K +SG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQKTVFVGHTGD--CMSLAVS-PDFKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALD 308
H + ++ P I +G+ D
Sbjct: 225 HESDINAICFFPNGEAICTGSDD 247
Score = 144 (55.7 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC----VN 122
Q FTGHE ++ + F + + + SDD + RL+D+ L + + C V
Sbjct: 220 QTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDES--IICGITSVA 277
Query: 123 FNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
F+ ++ +G D IWD G+ + +L H + V+ + DG + T S+D +
Sbjct: 278 FSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLK 337
Query: 183 IWD 185
+W+
Sbjct: 338 VWN 340
Score = 59 (25.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ ++ D +LL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQD 76
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 86/310 (27%), Positives = 154/310 (49%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P + L+G I+++ + DG+ LA ++AD + F
Sbjct: 50 PSVAVENLSGFQGIITALNITPDGKYLAVATADNQITLIDLANQEVVYSQRSP-VNNF-- 106
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+DL S+D ++L A+D+ + + V ++TL+GHT+ V V F+P IV
Sbjct: 107 -----ADLAISADGQWLAIAADNN-VDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIV 160
Query: 132 S-GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY--DGLCRIWDAST 188
S D T+RIW+ +G ++ L + P T+V F DG+ +T + D + WDA+T
Sbjct: 161 SVSGGDRTIRIWERASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANT 220
Query: 189 GHCMKTLIDDENPP-VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+ T + P ++ + +P+G+ LVG + N ++ WN + K L + G +
Sbjct: 221 FELLGT--SPQQPGFINGLAVTPDGRK-LVGAVRNFVKAWNLADAKELFSVRGPSLE--- 274
Query: 248 ISSTFSVT-NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
+T +V+ N +++ + +++ + +++L + K V L GH V+S+A P N + SGA
Sbjct: 275 -INTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGA 333
Query: 307 LDNDRTVKIW 316
D+TVKIW
Sbjct: 334 --EDKTVKIW 341
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 56/216 (25%), Positives = 101/216 (46%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASD-DKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
++ GH VS + FS D +VS S D+TIR+W+ + ++TL + V F
Sbjct: 137 VETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTLADNLGPTTSVVFT 196
Query: 125 PQSNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
P + ++GA D T++ WD T + L P + + DG +V + +
Sbjct: 197 PDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLV-GAVRNFVK 255
Query: 183 IWDASTGHCMKTLIDDENPP--VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240
W+ + K L P ++ + SPN +++ + T+ +++ + GK + T G
Sbjct: 256 AWNLADA---KELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRG 312
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276
H + +S FS +G + SG+ED V +W+L +
Sbjct: 313 HQG--WVLSLAFS-PDGNTLYSGAEDKTVKIWDLSA 345
Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 54/217 (24%), Positives = 94/217 (43%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLAS-SSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQG 75
+TL GH +S V FS DG + S S D+ +Q +
Sbjct: 138 ETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNL--------IQTLADNLGP 189
Query: 76 VSDLVFSSD-SRFLVSA-SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+ +VF+ D S+F+ A D+TI+ WD T L T ++ + P +V G
Sbjct: 190 TTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLV-G 248
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
A V+ W++ K L + S + + + + + T++ +G I+D + G +
Sbjct: 249 AVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVT 308
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
TL + +S FSP+G + G D T+++W+ S
Sbjct: 309 TLRGHQGWVLSLA-FSPDGNTLYSGAEDKTVKIWDLS 344
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 247 (92.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 59/208 (28%), Positives = 96/208 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D + ++++S D T LWD+ T T GH+ V ++ +P
Sbjct: 137 RELPGHTGYLSCCRFLDDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
VSGA D + ++WD++ G C + H + AV F G T S D CR++D
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP--PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
+ L +N ++ V FS +G+ +L G D +W+ G GH N
Sbjct: 256 RADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNR 314
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 315 VSCLGVT---DDGMAVATGSWDSFLRIW 339
Score = 234 (87.4 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 67/253 (26%), Positives = 120/253 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + LP H+ ++ F DG I+TSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDG-QIITSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T + V + SP+ K + G D + +LW+ G +++TGH +
Sbjct: 172 ETGQ-QTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD---PVISVASHPTENIIA 303
I++ +G +GS+D+ L++L++ + + L H + + SVA + ++
Sbjct: 229 -INAVSFFPSGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSKSGRLLL 286
Query: 304 SGALDNDRTVKIW 316
+G +D +W
Sbjct: 287 AGY--DDFNCSVW 297
Score = 224 (83.9 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 59/217 (27%), Positives = 104/217 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F DG+++ +SS D FTGH
Sbjct: 135 VSRELPGHTGYLSCCRFLDDGQII-TSSGDTTCALWDIETGQQTTT--------FTGHSG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L S D + VS + D + +LWD+ C ++ GH + + V+F P +G+
Sbjct: 186 DVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L +L +H + +T+V F++ G +++ D C +WDA G
Sbjct: 246 DDATCRLFDLRADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ LR+WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 194 (73.4 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 52/211 (24%), Positives = 100/211 (47%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F +G+ I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQ-IITSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+TGH+ +S + + K VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFTGHSGDVMSLSLSPDL---KTFVSGACDASSKLWDIRDGMCRQSFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + +V+ P+ A+G+ +D T +++
Sbjct: 225 HISDINAVSFFPSGYAFATGS--DDATCRLF 253
Score = 65 (27.9 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + +D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQD 76
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 84/276 (30%), Positives = 138/276 (50%)
Query: 15 LTQTLNGHLRAISSVKFSHDG-RLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
L TL GH ++S+ S + +L SSS DK L+ GH
Sbjct: 7 LKGTLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLK---GHS 63
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
VSD V SSD + +SAS DKT+RLW++ T T + +GHTN V V+F+ + IVSG
Sbjct: 64 HIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSG 123
Query: 134 AFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDASTG 189
+ D ++++W+ G C + HS+ V+ V F N +IV+S +D L ++W+ S+
Sbjct: 124 SRDRSIKLWNT-LGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSS- 181
Query: 190 HC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
C ++T ++ V SP+G G D T LW+ + K L Y+ + N +
Sbjct: 182 -CKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHL--YSLNANDEIH- 237
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE 284
+ FS +Y + + S + +++L+ + V +L+
Sbjct: 238 ALVFSPN--RYWLCAATASSIIIFDLEKKSKVDELK 271
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 68/237 (28%), Positives = 123/237 (51%)
Query: 71 GHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPT-ATCL----KTLIGHTNYVF-CVNF 123
GH V+ L S ++ L+S+S DKT+ +W++ T ++L GH++ V CV
Sbjct: 13 GHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCV-I 71
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ +S ++D+T+R+W++ TG + H++ V +V F+ D IV+ S D ++
Sbjct: 72 SSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKL 131
Query: 184 WDASTGHCMKTLIDDENPP-VSFVKFSPNGKF-ILVGT-LDNTLRLWNYSTGKILKTYTG 240
W+ + G C T+ + + VS V+FSPN + ++V + D +++W S+ K+ + G
Sbjct: 132 WN-TLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIG 190
Query: 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297
HT Y + T S +G SG +D LW+L K + L + D + ++ P
Sbjct: 191 HTG--YINTVTIS-PDGSLCASGGKDGTTMLWDLNESKHLYSLNAN-DEIHALVFSP 243
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 110 TLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDV---KT--GKCLKVLPAHSDPVTAV 163
TL GH +V + + ++ NM++S + D+T+ IW++ +T G + L HS V+
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG +++S+D R+W+ +TG + + N +S V FS + + I+ G+ D +
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLS-VSFSADNRQIVSGSRDRS 128
Query: 224 LRLWNYSTGKILKTYT--GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ 281
++LWN + G T T GH+ C+ + + N IVS D V +WEL S K+
Sbjct: 129 IKLWN-TLGDCKYTITEKGHSEWVSCVRFSPNPQN-PVIVSSGWDKLVKVWELSSCKLQT 186
Query: 282 KLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D T +W
Sbjct: 187 DHIGHTGYINTVTISPDGSLCASGGKDG--TTMLW 219
Score = 172 (65.6 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 56/224 (25%), Positives = 97/224 (43%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + SV FS D R + S S D+ +K GH
Sbjct: 96 TTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTIT-----EK--GHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ VS + FS + + +VS+ DK +++W++ + IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCA 208
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
SG D T +WD+ K L L A+ D + A+ F+ + + ++ + I+D
Sbjct: 209 SGGKDGTTMLWDLNESKHLYSLNAN-DEIHALVFSPNRYWLCAATASSII-IFDLEKKSK 266
Query: 192 MKTLIDD--------ENPPVSFVKFSPNGKFILVGTLDNTLRLW 227
+ L + P + +S +G+ + G DN +R W
Sbjct: 267 VDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTDNIIRAW 310
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 38/131 (29%), Positives = 65/131 (49%)
Query: 192 MKTLIDDENPPVSFVKFS-PNGKFILVGTLDNTLRLWNY-----STGKILKTYTGHTNSK 245
+K ++ N V+ + S N +L + D TL +WN S G ++ GH+
Sbjct: 7 LKGTLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHS--- 63
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305
+ +S ++G Y +S S D + LWEL + ++ GHT+ V+SV+ I SG
Sbjct: 64 HIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSG 123
Query: 306 ALDNDRTVKIW 316
+ DR++K+W
Sbjct: 124 S--RDRSIKLW 132
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 304 (112.1 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 77/248 (31%), Positives = 126/248 (50%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V L S D +S S D T+R+WD+ T TC L+GH V C+ + +++
Sbjct: 330 GHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVH--GDIV 386
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VSG++D T R+W + G+ L+ L H + A+ F DG I T S D RIWD +TG
Sbjct: 387 VSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQ 444
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C ++ V ++ S G ++ G D ++R+W+ + + H NS ++S
Sbjct: 445 C-HAILQGHTSLVGQLQMS--GDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNS---VTS 498
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
N + IVSG D V +W L++ +++++L +D V V + +I S +
Sbjct: 499 -LQFDNNR-IVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSR--SG 554
Query: 311 RTV-KIWT 317
RTV ++W+
Sbjct: 555 RTVMEVWS 562
Score = 275 (101.9 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 70/251 (27%), Positives = 129/251 (51%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
Q+ +QGV + + +++V++ D+ I ++D KTL GH V+ + P
Sbjct: 246 QRHISPDQGVVTSLHLTP-KYIVASLDNAKIHVYDT-NGENQKTLEGHVMGVWAMV--PW 301
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
N++VSG D VR+W++ TG+ + +L H+ V + + T I + S D RIWD
Sbjct: 302 DNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAI-SGSRDTTLRIWDL 360
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG C L+ + S + +G ++ G+ D T R+W+ S G+ L+ +GH + Y
Sbjct: 361 RTGTCRSVLVGHQ---ASVRCLAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIY 417
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
I+ F +G+ I +GS D+ V +W+ + + L+GHT ++ + ++ G+
Sbjct: 418 AIA--F---DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTS-LVGQLQMSGDTLVTGGS 471
Query: 307 LDNDRTVKIWT 317
D +V++W+
Sbjct: 472 ---DGSVRVWS 479
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 303 (111.7 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 73/245 (29%), Positives = 122/245 (49%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H VS + + D ++ DD+ D T +K L GH V+ F S+ ++
Sbjct: 307 HRVDVSRIHLACD---ILEEEDDE-----DDDVGTEMKVLRGHCGPVYSTRFLADSSGLL 358
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
S + D ++R WD+ + + H+ PV VD + + S+D R+W +
Sbjct: 359 SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYP 418
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
++ + V VKF PN ++ G+ D T+RLW+ G ++ +TGH +S
Sbjct: 419 LR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGP--VLSLA 475
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311
FS NGKY+ S ED + LW+L S + ++L GHTD + S+ P ++IAS ++DN
Sbjct: 476 FS-PNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDN-- 532
Query: 312 TVKIW 316
+V++W
Sbjct: 533 SVRVW 537
Score = 298 (110.0 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 70/233 (30%), Positives = 115/233 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V F +DS L+S S+D +IR WD+ + T GH V+ V+ +P S
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYF 399
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
SG+ D T R+W L++ H V V F+ + + T S D R+W A G+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
++ L PV + FSPNGK++ D L+LW+ ++G + K GHT++ S
Sbjct: 460 SVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDN--ITSL 516
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
TFS + I S S D+ V +W++++ +G + ++ V + N+++
Sbjct: 517 TFS-PDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLS 568
Score = 259 (96.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 60/215 (27%), Positives = 99/215 (46%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T + L GH + S +F D L S S D + GH
Sbjct: 333 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--------YQGHA 384
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V D+ S S + S S D+T RLW L+ GH V CV F+P SN + +G
Sbjct: 385 YPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 444
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D+TVR+W + G +++ H PV ++ F+ +G + ++ D ++WD ++G K
Sbjct: 445 STDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFK 504
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L ++ + FSP+ I ++DN++R+W+
Sbjct: 505 EL-RGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 226 (84.6 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 52/192 (27%), Positives = 86/192 (44%)
Query: 2 SSDQSLESFRPYTLTQTL--NGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D S+ + + T T+ GH + V S AS S D+
Sbjct: 361 SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYP-- 418
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L+ + GH V + F +S +L + S DKT+RLW ++ GH V
Sbjct: 419 ------LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL 472
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+P + S D+ +++WD+ +G K L H+D +T++ F+ D ++I ++S D
Sbjct: 473 SLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDN 532
Query: 180 LCRIWDASTGHC 191
R+WD HC
Sbjct: 533 SVRVWDIRNTHC 544
Score = 225 (84.3 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 72/249 (28%), Positives = 109/249 (43%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F EQ ++ S +S+ L + D+ I+LW + + K L + V + +
Sbjct: 264 FYNTEQLLNTAEISPESKLLAAGFDNSCIKLWSLRS----KKLKPEPHRVDVSRIHLACD 319
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
I+ DE D G +KVL H PV + F D + +++ S D R WD
Sbjct: 320 -ILEEEDDE-----DDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-- 371
Query: 189 GHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
G T++ + PV V SP + G+ D T RLW++ L+ Y GH C
Sbjct: 372 GSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 431
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
+ F N Y+ +GS D V LW Q V+ GH PV+S+A P +AS
Sbjct: 432 VK--FH-PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAG- 487
Query: 308 DNDRTVKIW 316
D+ +K+W
Sbjct: 488 -EDQRLKLW 495
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/218 (23%), Positives = 91/218 (41%)
Query: 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163
T C + +P+S ++ +G + +++W +++ K LK P H V+ +
Sbjct: 257 TTICFYAFYNTEQLLNTAEISPESKLLAAGFDNSCIKLWSLRSKK-LKPEP-HRVDVSRI 314
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
D I+ D D G MK L P S +F + +L + D +
Sbjct: 315 HLACD---ILEEEDDE-----DDDVGTEMKVLRGHCGPVYS-TRFLADSSGLLSCSEDMS 365
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCIS-STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282
+R W+ + Y GH + + S +S+ Y SGS D LW ++
Sbjct: 366 IRYWDLGSFTNTVLYQGHAYPVWDVDISPYSL----YFASGSHDRTARLWSFDRTYPLRI 421
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
GH V V HP N +A+G+ D+TV++W+ ++
Sbjct: 422 YAGHLADVDCVKFHPNSNYLATGS--TDKTVRLWSAQQ 457
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 246 (91.7 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 59/208 (28%), Positives = 96/208 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D + ++++S D T LWD+ T T GH+ V ++ +P
Sbjct: 137 RELPGHTGYLSCCRFLDDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
VSGA D + ++WD++ G C + H + AV F G T S D CR++D
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDL 255
Query: 187 STGHCMKTLIDDENP--PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
+ L +N ++ V FS +G+ +L G D +W+ G GH N
Sbjct: 256 RADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNR 314
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 315 VSCLGVT---DDGMAVATGSWDSFLRIW 339
Score = 234 (87.4 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 67/253 (26%), Positives = 120/253 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + + DSR LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++KT G + + LP H+ ++ F DG I+TSS D C +WD
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDG-QIITSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG T + V + SP+ K + G D + +LW+ G +++TGH +
Sbjct: 172 ETGQ-QTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD---PVISVASHPTENIIA 303
I++ +G +GS+D+ L++L++ + + L H + + SVA + ++
Sbjct: 229 -INAVSFFPSGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSKSGRLLL 286
Query: 304 SGALDNDRTVKIW 316
+G +D +W
Sbjct: 287 AGY--DDFNCSVW 297
Score = 224 (83.9 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 59/217 (27%), Positives = 104/217 (47%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F DG+++ +SS D FTGH
Sbjct: 135 VSRELPGHTGYLSCCRFLDDGQII-TSSGDTTCALWDIETGQQTTT--------FTGHSG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L S D + VS + D + +LWD+ C ++ GH + + V+F P +G+
Sbjct: 186 DVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L +L +H + +T+V F++ G +++ D C +WDA G
Sbjct: 246 DDATCRLFDLRADQEL-LLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGR 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ LR+WN
Sbjct: 305 SGVLAGHDNR-VSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 194 (73.4 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 52/211 (24%), Positives = 100/211 (47%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + IWD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ T G+ + + +S +F +G+ I+ + D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQ-IITSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ T+TGH+ +S + + K VSG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQTTTFTGHSGDVMSLSLSPDL---KTFVSGACDASSKLWDIRDGMCRQSFTG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + +V+ P+ A+G+ +D T +++
Sbjct: 225 HISDINAVSFFPSGYAFATGS--DDATCRLF 253
Score = 65 (27.9 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ + +D RLL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQD 76
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 300 (110.7 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 69/231 (29%), Positives = 117/231 (50%)
Query: 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147
+VS S D T+ LW + + + L H V V F+P + + + FD T R++D+ T
Sbjct: 269 VVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTK 328
Query: 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207
K L HS V V F+ DG++ +T +D R+WD TG C+ L D + V+
Sbjct: 329 KELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFL-DGHTKEIHSVE 387
Query: 208 FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267
+ PNG ++ G+ DN++++W+ + T HT+ ++ + G+Y+VS S D
Sbjct: 388 WMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTS---VVTRVRADAAGQYLVSASFDC 444
Query: 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318
+ +W + +++L+GH ++ V P + S A D RT K+W Q
Sbjct: 445 TLKMWSTTGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFD--RTFKLWAQ 493
Score = 247 (92.0 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 68/247 (27%), Positives = 119/247 (48%)
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-------QSNM-IVS 132
FS+DS +V+A ++ +W IGH++ C F+P S++ +VS
Sbjct: 212 FSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVS 271
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
++D TV +W + + L H V+ V F+ +G + T+ +D R++D +T
Sbjct: 272 CSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTT---K 328
Query: 193 KTLIDDE--NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
K L+ E + V+ V F P+G L G D R+W+ TG+ + GHT I S
Sbjct: 329 KELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKE---IHS 385
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
+ NG +++GS D+ + +W+L+ R+ + HT V V + + S + D
Sbjct: 386 VEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDC- 444
Query: 311 RTVKIWT 317
T+K+W+
Sbjct: 445 -TLKMWS 450
Score = 234 (87.4 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 53/201 (26%), Positives = 101/201 (50%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H Q VS + F + L +A D T R++D+ T L GH+ V V F+P ++ +
Sbjct: 295 HPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVAL 354
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
+G D R+WD++TG+C+ L H+ + +V++ +G ++T S D ++WD
Sbjct: 355 TGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRN 414
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
T+ V+ V+ G++++ + D TL++W+ + + L+ GH C+ +
Sbjct: 415 TYTM-PAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDIS 473
Query: 252 FSVTNGKYIVSGSEDSCVYLW 272
+G+++ S + D LW
Sbjct: 474 ---PDGQWMCSSAFDRTFKLW 491
Score = 227 (85.0 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 44/160 (27%), Positives = 84/160 (52%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + V+D+ F D ++ D R+WD+ T C+ L GHT + V + P +
Sbjct: 336 GHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEM 395
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
++G+ D ++++WD++ + +PAH+ VT V + G +V++S+D ++W ++TG
Sbjct: 396 ITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMW-STTGW 454
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230
+ + + V SP+G+++ D T +LW S
Sbjct: 455 QPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQS 494
Score = 180 (68.4 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 55/209 (26%), Positives = 99/209 (47%)
Query: 119 FCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDFN------RDGT 170
FC F+ S IV+ + +V +W K +C + + HS F+ D +
Sbjct: 209 FC-EFSADSEHIVTAGWSGSVAVW--KREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYS 265
Query: 171 M--IVTSSYDGLCRIWDASTGHCMKTLIDDENPP-VSFVKFSPNGKFILVGTLDNTLRLW 227
+V+ SYDG +W S + L +++P VS V F PNG + D+T R++
Sbjct: 266 SLNVVSCSYDGTVLLWSLSQESPIGEL--EQHPQRVSKVAFHPNGHHLATACFDSTWRMY 323
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287
+ +T K L GH+ S ++ +G ++G D +W++++ + + L+GHT
Sbjct: 324 DLTTKKELLYQEGHSKS---VADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHT 380
Query: 288 DPVISVASHPTENIIASGALDNDRTVKIW 316
+ SV P + +G+ DN ++K+W
Sbjct: 381 KEIHSVEWMPNGYEMITGSSDN--SMKVW 407
Score = 144 (55.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 40/184 (21%), Positives = 81/184 (44%)
Query: 9 SFRPYTLT---QTL--NGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXX 63
++R Y LT + L GH ++++ V F DG + + D
Sbjct: 319 TWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHD--------CYGRVWDMRTG 370
Query: 64 XXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF 123
+ GH + + + + + +++ S D ++++WD+ T+ HT+ V V
Sbjct: 371 RCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRA 430
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+ +VS +FD T+++W + L+ L H + VD + DG + +S++D ++
Sbjct: 431 DAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKL 490
Query: 184 WDAS 187
W S
Sbjct: 491 WAQS 494
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 34/126 (26%), Positives = 57/126 (45%)
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYST-GKILKTYTGHTNSKYCIS-STFSVTNGKY 259
PV+F +FS + + I+ ++ +W + +K + GH++ C + T Y
Sbjct: 206 PVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIK-FIGHSSQAGCARFHPGAFTQNDY 264
Query: 260 ----IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKI 315
+VS S D V LW L + +LE H V VA HP + +A+ D+ +
Sbjct: 265 SSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYD 324
Query: 316 WTQEKE 321
T +KE
Sbjct: 325 LTTKKE 330
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 262 (97.3 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 64/252 (25%), Positives = 129/252 (51%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F ++ V + F +R L RL+D+P T ++ L N V V+ N
Sbjct: 256 FYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGE 315
Query: 129 MIVSGAFD-ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+ G+ + +++ ++ + H D ++ ++ DG+ +VT+S DG ++WD +
Sbjct: 316 WLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDIT 375
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY- 246
+G C+ T ++ V+ V+F+ G+ + +LD T+R W+ + +T+TG ++
Sbjct: 376 SGFCLATF-EEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFN 434
Query: 247 CISSTFSVTNGKYIVSGSEDSC-VYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305
C++ S G+ + +GS D+ +++W +Q+ +++ L GH PV S S EN + +
Sbjct: 435 CLAVDPS---GEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPV-SCLSFSQENSVLAS 490
Query: 306 ALDNDRTVKIWT 317
A D+T++IW+
Sbjct: 491 A-SWDKTIRIWS 501
Score = 255 (94.8 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 55/197 (27%), Positives = 101/197 (51%)
Query: 113 GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172
GH + + ++P + +V+ + D +++WD+ +G CL H+ VTAV F + G ++
Sbjct: 343 GHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVM 402
Query: 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN-TLRLWNYST 231
+SS DG R WD +T E + + P+G+ + G+LDN + +W+ T
Sbjct: 403 FSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQT 462
Query: 232 GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR-KVVQKLEGHTDPV 290
G++L +GH C+S FS N + S S D + +W + R + V+ +E ++D V
Sbjct: 463 GQLLDALSGHEGPVSCLS--FSQENS-VLASASWDKTIRIWSIFGRSQQVEPIEVYSD-V 518
Query: 291 ISVASHPTENIIASGAL 307
++++ P +A L
Sbjct: 519 LALSMRPDGKEVAVSTL 535
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 55/223 (24%), Positives = 100/223 (44%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
Y L Q GH + +S+ +S DG + ++S D L F H
Sbjct: 337 YILKQ--QGHFDSTNSLAYSPDGSRVVTASED--------GKIKVWDITSGFCLATFEEH 386
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF-CVNFNPQSNMIV 131
V+ + F+ + + S+S D T+R WD+ +T G F C+ +P ++
Sbjct: 387 TSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVC 446
Query: 132 SGAFDE-TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+G+ D + +W V+TG+ L L H PV+ + F+++ +++ ++S+D RIW G
Sbjct: 447 AGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIF-GR 505
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233
+ + V + P+GK + V TL + ++N K
Sbjct: 506 SQQVEPIEVYSDVLALSMRPDGKEVAVSTLKGQISIFNIEDAK 548
Score = 200 (75.5 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 56/229 (24%), Positives = 94/229 (41%)
Query: 2 SSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXX 61
S + L +TL Q L+ +++V + G LA S+
Sbjct: 281 SGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSK-------LGQLLVYEWQ 333
Query: 62 XXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCV 121
+ K GH + L +S D +V+AS+D I++WD+ + CL T HT+ V V
Sbjct: 334 SESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAV 393
Query: 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD-PVTAVDFNRDGTMIVTSSYDGL 180
F + ++ S + D TVR WD+ + + + + G ++ S D
Sbjct: 394 QFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNF 453
Query: 181 -CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+W TG + L E P VS + FS + + D T+R+W+
Sbjct: 454 DIHVWSVQTGQLLDALSGHEGP-VSCLSFSQENSVLASASWDKTIRIWS 501
Score = 165 (63.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 66/286 (23%), Positives = 115/286 (40%)
Query: 27 SSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVFSSDSR 86
S+VKFS DGRL A +S + GH Q ++ L +S DSR
Sbjct: 100 SAVKFSPDGRLFALASGRFLQIWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSR 159
Query: 87 FLVSASDDKTIRLWDVPTAT---CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143
F+++ S D + ++W V + T GH +YV F+ I + + D V +W+
Sbjct: 160 FILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWE 219
Query: 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPV 203
T + P+ D + D ++ + + S Y W + H V
Sbjct: 220 F-TKR-----PSDDDDNESEDDDKQEEVDI-SKYS-----WRITKKHFFYA----NQAKV 263
Query: 204 SFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263
V F P + + VG RL++ +++ + N +S G+++ G
Sbjct: 264 KCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVN---QTGEWLAFG 320
Query: 264 SED-SCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
S + ++E QS + K +GH D S+A P + + + + D
Sbjct: 321 SSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASED 366
Score = 157 (60.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 57/208 (27%), Positives = 95/208 (45%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
T H ++++V+F+ G+++ SSS D + FTG E+
Sbjct: 382 TFEEHTSSVTAVQFAKRGQVMFSSSLD--------GTVRAWDLIRYRNFRTFTGTERIQF 433
Query: 78 DLVFSSDSRFLVSAS--DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF 135
+ + S +V A D+ I +W V T L L GH V C++F+ +++++ S ++
Sbjct: 434 NCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASW 493
Query: 136 DETVRIWDVKTGKCLKVLP--AHSDPVTAVDFNRDGTMIVTSSYDGLCRIW---DAS-TG 189
D+T+RIW + G+ +V P +SD V A+ DG + S+ G I+ DA G
Sbjct: 494 DKTIRIWSI-FGRSQQVEPIEVYSD-VLALSMRPDGKEVAVSTLKGQISIFNIEDAKQVG 551
Query: 190 H--CMKTLIDDE-NPPVSFVKFSPNGKF 214
+ C K +I N K S KF
Sbjct: 552 NIDCRKDIISGRFNQDRFTAKNSERSKF 579
Score = 79 (32.9 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 21/92 (22%), Positives = 35/92 (38%)
Query: 10 FRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKF 69
F P+ + GH + I+S+ +S D R + ++S D F
Sbjct: 133 FAPFVRHRVHAGHFQDITSLTWSQDSRFILTTSKDLSAKIWSVDSEEKNLAATT-----F 187
Query: 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101
GH V FS D + + S D + +W+
Sbjct: 188 NGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWE 219
Score = 48 (22.0 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 6 SLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSAD 44
S++S T NGH + FSHD + + S D
Sbjct: 174 SVDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKD 212
Score = 45 (20.9 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 206 VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGS 264
+ +S +G I+ G +N++ L++ +LK + N ++ T N K + +GS
Sbjct: 583 IHYSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVSRNM--ALNGTLEFLNSKKMTEAGS 640
Query: 265 ED 266
D
Sbjct: 641 LD 642
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 302 (111.4 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 72/245 (29%), Positives = 123/245 (50%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H+ VS + + D FL D+ D T +K L GH V+ F S+ ++
Sbjct: 303 HQVDVSRIHLACD--FLEEEDDE------DDNLGTEMKVLRGHCGPVYSTRFLADSSGLL 354
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
S + D ++R WD+ + + H+ PV +D + ++S+D R+W +
Sbjct: 355 SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYP 414
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
++ + V VKF PN ++ G+ D T+RLW+ G ++ +TGH +S
Sbjct: 415 LR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGP--VLSLA 471
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311
FS NGKY+ S ED + LW+L S + ++L GHTD + S+ P +++AS ++DN
Sbjct: 472 FS-PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDN-- 528
Query: 312 TVKIW 316
+V++W
Sbjct: 529 SVRVW 533
Score = 287 (106.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 67/233 (28%), Positives = 113/233 (48%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V F +DS L+S S+D +IR WD+ + T GH V+ ++ +P S
Sbjct: 336 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYF 395
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S + D T R+W L++ H V V F+ + + T S D R+W G+
Sbjct: 396 ASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 455
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
++ L PV + FSPNGK++ D L+LW+ ++G + K GHT++ S
Sbjct: 456 SVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSL 512
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
TFS + + S S D+ V +W+++S +G + ++ V + N+++
Sbjct: 513 TFS-PDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLS 564
Score = 266 (98.7 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 61/215 (28%), Positives = 100/215 (46%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T + L GH + S +F D L S S D + GH
Sbjct: 329 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--------YQGHA 380
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V DL S S + SAS D+T RLW L+ GH V CV F+P SN + +G
Sbjct: 381 YPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 440
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D+TVR+W + G +++ H PV ++ F+ +G + ++ D ++WD ++G K
Sbjct: 441 STDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYK 500
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L ++ + FSP+ + ++DN++R+W+
Sbjct: 501 EL-RGHTDNITSLTFSPDSSLVASASMDNSVRVWD 534
Score = 227 (85.0 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 50/192 (26%), Positives = 88/192 (45%)
Query: 2 SSDQSLESFRPYTLTQTL--NGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D S+ + + T T+ GH + + S AS+S D+
Sbjct: 357 SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYP-- 414
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L+ + GH V + F +S +L + S DKT+RLW ++ GH V
Sbjct: 415 ------LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVL 468
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+P + S D+ +++WD+ +G K L H+D +T++ F+ D +++ ++S D
Sbjct: 469 SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDN 528
Query: 180 LCRIWDASTGHC 191
R+WD + HC
Sbjct: 529 SVRVWDIRSSHC 540
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 71/249 (28%), Positives = 109/249 (43%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F EQ ++ S DS+ L + D+ I+LW + + K L + V S
Sbjct: 260 FYNTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRS----KKLKSEPHQV------DVSR 309
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
+ ++ F E D G +KVL H PV + F D + +++ S D R WD
Sbjct: 310 IHLACDFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-- 367
Query: 189 GHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
G T++ + PV + SP+ + + D T RLW++ L+ Y GH C
Sbjct: 368 GSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDC 427
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
+ F N Y+ +GS D V LW Q V+ GH PV+S+A P +AS
Sbjct: 428 VK--FH-PNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAG- 483
Query: 308 DNDRTVKIW 316
D+ +K+W
Sbjct: 484 -EDQRLKLW 491
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/197 (24%), Positives = 80/197 (40%)
Query: 124 NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183
+P S ++ +G + +++W +++ K LK P H V+ + D D L
Sbjct: 273 SPDSKLLAAGFDNSCIKLWSLRSKK-LKSEP-HQVDVSRIHLACDFLEEEDDEDDNLGTE 330
Query: 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243
GHC PV +F + +L + D ++R W+ + Y GH
Sbjct: 331 MKVLRGHC---------GPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHA- 380
Query: 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
Y + + Y S S D LW ++ GH V V HP N +A
Sbjct: 381 --YPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA 438
Query: 304 SGALDNDRTVKIW-TQE 319
+G+ D+TV++W TQ+
Sbjct: 439 TGS--TDKTVRLWSTQQ 453
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 301 (111.0 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 81/307 (26%), Positives = 142/307 (46%)
Query: 20 NGHLRAISSVK-FSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
+GH + +S+V+ F G +L S S D L+ F GH + V D
Sbjct: 286 SGHTKGVSAVRLFPLSGHMLLSCSMD-------CKIKLWEVYGDRRCLRTFIGHGKAVRD 338
Query: 79 LVFSS-DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP---QSNMIVSGA 134
+ F++ +RFL SA+ D+ I+LWD T C+ +CV FNP + N+ V+G
Sbjct: 339 ICFNNAGTRFL-SAAYDRYIKLWDTETGQCISRFTNR-KVPYCVKFNPDEDKQNLFVAGM 396
Query: 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194
D+ + WD+++G+ ++ H V + F + V++S D R+W+ K
Sbjct: 397 SDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKY 456
Query: 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL---KTYTGHTNSKYCISST 251
+ + + V SPNGK++ ++DN + ++ L K + GH + Y
Sbjct: 457 IAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVD 516
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP--TENIIASGALDN 309
FS + Y++SG D + +W+ ++ K+ +++ H I HP T +I G
Sbjct: 517 FS-PDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGW--- 572
Query: 310 DRTVKIW 316
D +K+W
Sbjct: 573 DGLIKLW 579
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 57/267 (21%), Positives = 109/267 (40%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+T GH +A+ + F++ G S++ D+ + +FT +
Sbjct: 327 RTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQC--------ISRFTNRKVPY 378
Query: 77 SDLVFSSDS---RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+ F+ D V+ DK I WD+ + ++ H V + F ++ VS
Sbjct: 379 C-VKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVST 437
Query: 134 AFDETVRIWDVKTGKCLKVL--PA-HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+ D+++R+W+ K + P+ HS P AV + +G + S D I+ A
Sbjct: 438 SDDKSLRVWEWDIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRF 495
Query: 191 CM-KTLIDDENPPVSF---VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
+ K I + + V FSP+ +++ G D L +W++ T K+ H K
Sbjct: 496 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAH--DKV 553
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWE 273
CI + + +++ D + LW+
Sbjct: 554 CIGAVWHPHETSKVITCGWDGLIKLWD 580
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/191 (23%), Positives = 78/191 (40%)
Query: 3 SDQSLESF--RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
SD+ + + R + Q + HL A++++ F + R S+S DK
Sbjct: 397 SDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKY 456
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGH--T 115
+ + S + ++L S D I ++ L K GH
Sbjct: 457 IAEPSMHSMPA-------VTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVA 509
Query: 116 NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVT 174
Y V+F+P + ++SG D + IWD KT K + AH + AV + + ++T
Sbjct: 510 GYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKVIT 569
Query: 175 SSYDGLCRIWD 185
+DGL ++WD
Sbjct: 570 CGWDGLIKLWD 580
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 302 (111.4 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 71/254 (27%), Positives = 119/254 (46%)
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
+ H V FS D+++L+S S+D + RLW V T T L GHT V+ V F P
Sbjct: 374 RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFG 433
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+ + + D+T ++W L+V H V V F+ + ++T S D CR+WD
Sbjct: 434 HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVH 493
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
GH ++ + + PV+ V +P+G + + + LW+ TG+ +KT GH + Y
Sbjct: 494 RGHSVR-VFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYS 552
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH-TDPVISVASHPTENII-ASG 305
+S FS +VSG D V W++ + T V++ S T +
Sbjct: 553 LS--FS-RESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGSVVTPFSAKTSTFNEVNW 609
Query: 306 ALDNDRTVKIWTQE 319
+ D+ V ++T++
Sbjct: 610 STSPDQMVALYTKQ 623
Score = 272 (100.8 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 77/264 (29%), Positives = 117/264 (44%)
Query: 19 LNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
L H + FS D + L S S D L + GH V D
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSED--------ASARLWSVDTKTALVAYKGHTGPVWD 426
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138
+ F + +AS D+T +LW L+ GH + V CV F+P S +++G+ D+T
Sbjct: 427 VAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKT 486
Query: 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
R+WDV G ++V H+ PVTAV DG + ++ +GL +WD TG +KT+
Sbjct: 487 CRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGH 546
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLW-----NYSTGKILKTYTGHTNSKYCI-SSTF 252
S + FS ++ G D T+R W NY+ + + TG + + +STF
Sbjct: 547 RGNIYS-LSFSRESTVLVSGGSDCTVRAWDVFKTNYNN-PVSSSLTGSVVTPFSAKTSTF 604
Query: 253 SVTNGKYIVSGSEDSCVYLWELQS 276
+ N S S D V L+ Q+
Sbjct: 605 NEVNW----STSPDQMVALYTKQT 624
Score = 264 (98.0 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 61/249 (24%), Positives = 115/249 (46%)
Query: 81 FSSDSRFLVSASDDKTIRLWDV-------PTATCLKT------LIGHTNYVFCVNFNPQS 127
FS DS + + IRLW + P +T ++ L+ H+ V+ F+P +
Sbjct: 332 FSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDN 391
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
++S + D + R+W V T L H+ PV V F G T+S+D ++W
Sbjct: 392 KYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD 451
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+ ++ + V V F PN ++L G+ D T RLW+ G ++ + GHT
Sbjct: 452 HIYPLRVFAGHLSD-VDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQP--- 507
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
+++ +G + S + ++LW++ + + ++ + GH + S++ ++ SG
Sbjct: 508 VTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGG- 566
Query: 308 DNDRTVKIW 316
+D TV+ W
Sbjct: 567 -SDCTVRAW 574
Score = 247 (92.0 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 71/247 (28%), Positives = 108/247 (43%)
Query: 89 VSASDDKTIRLWDVPTAT----CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144
V A D + RL P A+ C+ T N + C F+P S MI G + +R+W +
Sbjct: 294 VEAVKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSI 353
Query: 145 KTGKCLKVLP---------------AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
K K K LP +HS PV F+ D +++ S D R+W T
Sbjct: 354 KADK--KSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTK 411
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249
+ PV V F P G + + D T +LW+ L+ + GH + C+
Sbjct: 412 TAL-VAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCV- 469
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
TF N Y+++GS D LW++ V+ GHT PV +VA P + +AS D+
Sbjct: 470 -TFH-PNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASA--DS 525
Query: 310 DRTVKIW 316
+ + +W
Sbjct: 526 EGLIHLW 532
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 252 (93.8 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 57/207 (27%), Positives = 94/207 (45%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ GH +S F D++ +V++S D T LWD+ T GHT V ++ +P
Sbjct: 137 RELPGHTGYLSCCRFLDDNQ-IVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+SGA D + ++WD++ G C + P H + AV F G T S D CR++D
Sbjct: 196 FRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDI 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ D ++ V FS +G+ + G D +W+ + GH N
Sbjct: 256 RADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---EDGMAVCTGSWDSFLKIW 339
Score = 222 (83.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 65/259 (25%), Positives = 121/259 (46%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + ++SDSR LVSAS D + +WD T + + +++V + P + +
Sbjct: 53 GHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+ +KT G + + LP H+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF-LDDNQIVTSSGDMTCALWDI 171
Query: 187 STGH-CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
TG C T V + SP+ + + G D + +LW+ G +T+ GH +
Sbjct: 172 ETGQQC--TAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESD- 228
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD---PVISVASHPTENII 302
I++ +G +GS+D+ L+++++ + + + H + + SVA + ++
Sbjct: 229 --INAVAFFPSGNAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSVAFSKSGRLL 285
Query: 303 ASGALDNDRTVKIWTQEKE 321
+G +D +W ++
Sbjct: 286 FAGY--DDFNCNVWDSMRQ 302
Score = 211 (79.3 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 56/217 (25%), Positives = 100/217 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+++ L GH +S +F D +++ +SS D FTGH
Sbjct: 135 VSRELPGHTGYLSCCRFLDDNQIV-TSSGDMTCALWDIETGQQCTA--------FTGHTG 185
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L S D R +S + D + +LWD+ C +T GH + + V F P N +G+
Sbjct: 186 DVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGS 245
Query: 135 FDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
D T R++D++ + L + +H + +T+V F++ G ++ D C +WD+
Sbjct: 246 DDATCRLFDIRADQELAMY-SHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQER 304
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L +N VS + + +G + G+ D+ L++WN
Sbjct: 305 AGVLAGHDNR-VSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 188 (71.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 50/211 (23%), Positives = 98/211 (46%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S +VS + D + +WD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G+ + D +C I+ T G+ + + +S +F + + I+ + D T
Sbjct: 109 GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IVTSSGDMTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ +TGHT +S + + + +SG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQCTAFTGHTGDVMSLSLS---PDFRTFISGACDASAKLWDIRDGMCKQTFPG 224
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKIW 316
H + +VA P+ N A+G+ +D T +++
Sbjct: 225 HESDINAVAFFPSGNAFATGS--DDATCRLF 253
Score = 56 (24.8 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ ++ D R L S+S D
Sbjct: 49 RTLRGHLAKIYAMHWASDSRNLVSASQD 76
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 70/248 (28%), Positives = 130/248 (52%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV-PTATCLKTLIGHTNYVFCVNFNPQS 127
FTGH G++ L F D + ++S D T+ LW++ A C++ H+ V V ++P+
Sbjct: 14 FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR-FASHSAPVNGVAWSPKG 72
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
N++ S D TV+IW+ K AHS V +VDF+ G +++T+S D +IW +
Sbjct: 73 NLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVA 132
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+ + N V KFSPNGK + + D ++R+++ +G+ ++T+T +
Sbjct: 133 RRQFVSSFAQQNNW-VRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQ 191
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
++ N + G + ++++ +++Q H+ PV VA HP+ + + SG+
Sbjct: 192 LA-WHPWGNMLAVALGCNR--IKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGS- 247
Query: 308 DNDRTVKI 315
+DRT++I
Sbjct: 248 -DDRTIRI 254
Score = 250 (93.1 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 62/252 (24%), Positives = 120/252 (47%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVF 81
H ++ V +S G L+AS+ D+ +F H + V + F
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSG--------EFVAHSKAVRSVDF 110
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
S +++ASDDK+ ++W V + + N+V F+P ++ + + D++VRI
Sbjct: 111 DSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRI 170
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENP 201
+DV +G+C++ + ++ G M+ + +I+D S ++ + +
Sbjct: 171 YDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVV-HSA 229
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261
PV+ V F P+G F+L G+ D T+R+ + G+ + T TGHT++ ++ FS K+
Sbjct: 230 PVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVA--FSRDGDKFAT 287
Query: 262 SGSEDSCVYLWE 273
GS D + +W+
Sbjct: 288 GGS-DRQLLVWQ 298
Score = 197 (74.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 61/237 (25%), Positives = 104/237 (43%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVF 81
H +A+ SV F G L+ ++S DK + F V F
Sbjct: 101 HSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQF--------VSSFAQQNNWVRSAKF 152
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141
S + + + +ASDDK++R++DV + C++T + ++P NM+ ++I
Sbjct: 153 SPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKI 212
Query: 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENP 201
+DV + L++ HS PV V F+ G +++ S D RI D G + TL +
Sbjct: 213 FDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDA 272
Query: 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY-TGHTNSKYCISSTFSVTNG 257
V+ V FS +G G D L +W + L TY +K ++S+ ++G
Sbjct: 273 -VNAVAFSRDGDKFATGGSDRQLLVWQSN----LHTYDASQFEAKSALASSSCESSG 324
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 29/79 (36%), Positives = 39/79 (49%)
Query: 238 YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297
+TGH+ I+ +G I + S DS V LW L + H+ PV VA P
Sbjct: 14 FTGHSGG---ITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSP 70
Query: 298 TENIIASGALDNDRTVKIW 316
N++AS +DRTVKIW
Sbjct: 71 KGNLVASAG--HDRTVKIW 87
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 300 (110.7 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 72/245 (29%), Positives = 123/245 (50%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H+ VS + + D ++ DD+ D T +K L GH V+ F S+ ++
Sbjct: 325 HQVDVSRIHLACD---ILEEEDDE-----DDNAGTEMKILRGHCGPVYSTRFLADSSGLL 376
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
S + D ++R WD+ + + H+ PV +D + + S+D R+W +
Sbjct: 377 SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYP 436
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
++ + V VKF PN ++ G+ D T+RLW+ G ++ +TGH +S
Sbjct: 437 LR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGP--VLSLA 493
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311
FS NGKY+ S ED + LW+L S + ++L GHTD + S+ P ++IAS ++DN
Sbjct: 494 FS-PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN-- 550
Query: 312 TVKIW 316
+V++W
Sbjct: 551 SVRVW 555
Score = 292 (107.8 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 69/233 (29%), Positives = 115/233 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V F +DS L+S S+D +IR WD+ + T GH V+ ++ +P S
Sbjct: 358 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYF 417
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
SG+ D T R+W L++ H V V F+ + + T S D R+W A G+
Sbjct: 418 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 477
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
++ L PV + FSPNGK++ D L+LW+ ++G + K GHT++ S
Sbjct: 478 SVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSL 534
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
TFS + I S S D+ V +W++++ +G + ++ V + N+++
Sbjct: 535 TFS-PDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLS 586
Score = 265 (98.3 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 72/261 (27%), Positives = 119/261 (45%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T + L GH + S +F D L S S D + GH
Sbjct: 351 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--------YQGHA 402
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V DL S S + S S D+T RLW L+ GH V CV F+P SN + +G
Sbjct: 403 YPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 462
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D+TVR+W + G +++ H PV ++ F+ +G + ++ D ++WD ++G K
Sbjct: 463 STDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYK 522
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN----Y-------STGKILKTYTGHT 242
L ++ + FSP+ I ++DN++R+W+ Y S+G+++ YTG
Sbjct: 523 EL-RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQM 581
Query: 243 NSKYCISSTFSVTNGKYIVSG 263
++ +S F N +V+G
Sbjct: 582 SN--VLSVQFMACN-LLLVTG 599
Score = 229 (85.7 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 71/249 (28%), Positives = 109/249 (43%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F EQ ++ S DS+ L + D+ I+LW + + K L + V + +
Sbjct: 282 FYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRS----KKLKSEPHQVDVSRIHLACD 337
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
I+ DE D G +K+L H PV + F D + +++ S D R WD
Sbjct: 338 -ILEEEDDE-----DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-- 389
Query: 189 GHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
G T++ + PV + SP + G+ D T RLW++ L+ Y GH C
Sbjct: 390 GSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 449
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
+ F N Y+ +GS D V LW Q V+ GH PV+S+A P +AS
Sbjct: 450 VK--FH-PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAG- 505
Query: 308 DNDRTVKIW 316
D+ +K+W
Sbjct: 506 -EDQRLKLW 513
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/218 (23%), Positives = 92/218 (42%)
Query: 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163
T C + +P S ++ +G + +++W +++ K LK P H V+ +
Sbjct: 275 TTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKK-LKSEP-HQVDVSRI 332
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
D I+ D D + G MK ++ PV +F + +L + D +
Sbjct: 333 HLACD---ILEEEDDE-----DDNAGTEMK-ILRGHCGPVYSTRFLADSSGLLSCSEDMS 383
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCIS-STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282
+R W+ + Y GH + + S +S+ Y SGS D LW ++
Sbjct: 384 IRYWDLGSFTNTVLYQGHAYPVWDLDISPYSL----YFASGSHDRTARLWSFDRTYPLRI 439
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
GH V V HP N +A+G+ D+TV++W+ ++
Sbjct: 440 YAGHLADVDCVKFHPNSNYLATGS--TDKTVRLWSAQQ 475
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 299 (110.3 bits), Expect = 7.6e-26, P = 7.6e-26
Identities = 84/316 (26%), Positives = 144/316 (45%)
Query: 12 PYTLTQTLNGHLRAISSVKF-SHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
P L T +GH + +S+++F G LL S+ D ++ +
Sbjct: 271 PKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMD-------CKVKIWDVYNSGKCMRTYM 323
Query: 71 GHEQGVSDLVFSSD-SRFLVSASDDKTIRLWDVPTATCLKTL-IGHTNYVFCVNFNP--- 125
GH + V D+ FS+D S+FL +A DK I+ WD T + T G YV V NP
Sbjct: 324 GHAKAVRDICFSNDGSKFL-TAGYDKNIKYWDTETGQVISTFSTGKIPYV--VKLNPDDD 380
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ N++++G D+ + WD+ TG+ + H V + F + VTSS D R+W+
Sbjct: 381 KQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN----YSTGKILKTYTGH 241
+K + + + + PNG ++ +LDN + +++ + K K + GH
Sbjct: 441 FGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGH 499
Query: 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENI 301
+ Y FS +G++++SG + + W+ +S KV + L+ H I HP E
Sbjct: 500 IVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQS 558
Query: 302 -IASGALDNDRTVKIW 316
+A+ D +K W
Sbjct: 559 KVATCGWDG--LIKYW 572
Score = 116 (45.9 bits), Expect = 0.00067, P = 0.00067
Identities = 39/177 (22%), Positives = 69/177 (38%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+TQ + HL A++++ F + R +SS DK H
Sbjct: 404 VTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP-------HMH 456
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGH--TNYVFCVNFNPQSNM 129
+ + + +L + S D I ++ L K GH Y VNF+P
Sbjct: 457 SMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 516
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWD 185
++SG + WD K+ K + L H+ +++ + + + T +DGL + WD
Sbjct: 517 VMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 260 (96.6 bits), Expect = 8.1e-26, Sum P(2) = 8.1e-26
Identities = 62/248 (25%), Positives = 119/248 (47%)
Query: 73 EQGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+ G+ + + +L AS + +W+ + + + GH + + + ++P IV
Sbjct: 300 QNGIDFVSINKSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIV 359
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
+ A D +++WD+++G C+ H+ VTA F + G ++ T+S DG R WD
Sbjct: 360 TAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRN 419
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDN-TLRLWNYSTGKILKTYTGHTNSKYCISS 250
+T S + P+G+ + G+LD+ + +W+ TG++L +GH +S+
Sbjct: 420 FRTFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGP---VSA 476
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSR-KVVQKLEGHTDPVISVASHPTENIIASGALDN 309
+G +VSGS D +W + +R + + L+ D V+SVA P + +A LD
Sbjct: 477 VAFAPDGGLLVSGSWDKTARIWSVFNRTQTSEPLQLQAD-VLSVAVRPDSSQLAVSTLDG 535
Query: 310 DRTVKIWT 317
+ W+
Sbjct: 536 Q--ISFWS 541
Score = 219 (82.2 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
K GH ++ L +S D + +V+A+DD +++WD+ + C+ T HT+ V F +
Sbjct: 338 KQQGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKG 397
Query: 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSD-PVTAVDFNRDGTMIVTSSYDGL-CRIWD 185
N++ + + D ++R WD+ + + A + + + + G ++ S D IW
Sbjct: 398 NVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWS 457
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
TG + L E P VS V F+P+G ++ G+ D T R+W+ +T T
Sbjct: 458 VQTGQLLDQLSGHEGP-VSAVAFAPDGGLLVSGSWDKTARIWSVFN----RTQTSEPLQL 512
Query: 246 YCISSTFSVT-NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD 288
+ +V + + + D + W + + V ++G D
Sbjct: 513 QADVLSVAVRPDSSQLAVSTLDGQISFWSVTEAQQVSGVDGRRD 556
Score = 218 (81.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 60/218 (27%), Positives = 98/218 (44%)
Query: 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
Y L Q GH +++++ +S DG+ + +++ D + FT H
Sbjct: 335 YILKQ--QGHFDSMNALAYSPDGKRIVTAADD--------GKLKVWDIESGFCIVTFTEH 384
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF-CVNFNPQSNMIV 131
GV+ F+ L +AS D +IR WD+ +T T F C+ +P ++
Sbjct: 385 TSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVA 444
Query: 132 SGAFDE-TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+G+ D V IW V+TG+ L L H PV+AV F DG ++V+ S+D RIW
Sbjct: 445 AGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWSVFNRT 504
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ + +S V P+ + V TLD + W+
Sbjct: 505 QTSEPLQLQADVLS-VAVRPDSSQLAVSTLDGQISFWS 541
Score = 154 (59.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 44/201 (21%), Positives = 94/201 (46%)
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT-SSYD 178
C F+ +SN++V+G + ++++ + L + + V N+ G + +S
Sbjct: 263 CAAFHAESNLLVAGFSNGIFGLYEMPDFNLIHTLSISQNGIDFVSINKSGEWLAFGASKL 322
Query: 179 GLCRIWD-ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT 237
G +W+ S + +K ++ + +SP+GK I+ D L++W+ +G + T
Sbjct: 323 GQLLVWEWQSESYILKQ--QGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVT 380
Query: 238 YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS-VASH 296
+T HT+ +++ G + + S D + W+L + + T S +A
Sbjct: 381 FTEHTSG---VTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVD 437
Query: 297 PTENIIASGALDNDRTVKIWT 317
P+ ++A+G+LD+ V IW+
Sbjct: 438 PSGEVVAAGSLDSF-DVHIWS 457
Score = 73 (30.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 23/73 (31%), Positives = 31/73 (42%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK--TLIGHTNYVFCVNFNPQSNM 129
H V + +S DSRF +SAS D T R+W + L GH V F+
Sbjct: 151 HFDEVRHIEWSRDSRFFLSASKDLTARIWSLNQEEGFTPTVLSGHRQGVVGAWFSMDQET 210
Query: 130 IVSGAFDETVRIW 142
I + + D V W
Sbjct: 211 IYTVSKDGAVFDW 223
Score = 70 (29.7 bits), Expect = 8.1e-26, Sum P(2) = 8.1e-26
Identities = 23/99 (23%), Positives = 35/99 (35%)
Query: 2 SSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXX 61
+ D LE F P+ + H + +++S D R S+S D
Sbjct: 132 TGDDGLE-FAPFVRHHSHAAHFDEVRHIEWSRDSRFFLSASKDLTARIWSLNQEEGFTPT 190
Query: 62 XXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100
+GH QGV FS D + + S D + W
Sbjct: 191 V------LSGHRQGVVGAWFSMDQETIYTVSKDGAVFDW 223
Score = 48 (22.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 206 VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGS 264
+++S +G ++ G + L++ +T +LK +T N +S T N K + +G
Sbjct: 581 IQYSMDGSCLIAGGNSKYMCLYSTTTMVLLKKFTVSVNLS--LSGTQEFLNSKQLTEAGP 638
Query: 265 ED 266
++
Sbjct: 639 QE 640
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 299 (110.3 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 72/245 (29%), Positives = 122/245 (49%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
H+ VS + + D ++ DD+ D T +K L GH V+ F S+ ++
Sbjct: 307 HQVDVSRIHLACD---ILEEEDDE-----DDNAGTEMKILRGHCGPVYSTRFLADSSGLL 358
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
S + D ++R WD+ + + H+ PV +D + + S+D R+W +
Sbjct: 359 SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYP 418
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
++ + V VKF PN ++ G+ D T+RLW+ G ++ +TGH +S
Sbjct: 419 LR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGP--VLSLA 475
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311
FS NGKY+ S ED + LW+L S + ++L GHTD + S+ P +IAS ++DN
Sbjct: 476 FS-PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDN-- 532
Query: 312 TVKIW 316
+V++W
Sbjct: 533 SVRVW 537
Score = 297 (109.6 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 70/233 (30%), Positives = 116/233 (49%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V F +DS L+S S+D +IR WD+ + T GH V+ ++ +P S
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYF 399
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
SG+ D T R+W L++ H V V F+ + + T S D R+W A G+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
++ L PV + FSPNGK++ D L+LW+ ++G + K GHT++ S
Sbjct: 460 SVR-LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSL 516
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
TFS +G I S S D+ V +W++++ +G + ++ V + N+++
Sbjct: 517 TFSPDSG-LIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLS 568
Score = 258 (95.9 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 61/215 (28%), Positives = 99/215 (46%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T + L GH + S +F D L S S D + GH
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--------YQGHA 384
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V DL S S + S S D+T RLW L+ GH V CV F+P SN + +G
Sbjct: 385 YPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATG 444
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D+TVR+W + G +++ H PV ++ F+ +G + ++ D ++WD ++G K
Sbjct: 445 STDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYK 504
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L ++ + FSP+ I ++DN++R+W+
Sbjct: 505 EL-RGHTDNITSLTFSPDSGLIASASMDNSVRVWD 538
Score = 229 (85.7 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 71/249 (28%), Positives = 109/249 (43%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F EQ ++ S DS+ L + D+ I+LW + + K L + V + +
Sbjct: 264 FYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRS----KKLKSEPHQVDVSRIHLACD 319
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
I+ DE D G +K+L H PV + F D + +++ S D R WD
Sbjct: 320 -ILEEEDDE-----DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL-- 371
Query: 189 GHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
G T++ + PV + SP + G+ D T RLW++ L+ Y GH C
Sbjct: 372 GSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDC 431
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
+ F N Y+ +GS D V LW Q V+ GH PV+S+A P +AS
Sbjct: 432 VK--FH-PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAG- 487
Query: 308 DNDRTVKIW 316
D+ +K+W
Sbjct: 488 -EDQRLKLW 495
Score = 214 (80.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 38/126 (30%), Positives = 66/126 (52%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
L+ + GH V + F +S +L + S DKT+RLW ++ GH V + F+P
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSP 478
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
+ S D+ +++WD+ +G K L H+D +T++ F+ D +I ++S D R+WD
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWD 538
Query: 186 ASTGHC 191
+C
Sbjct: 539 IRNTYC 544
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/218 (23%), Positives = 92/218 (42%)
Query: 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163
T C + +P S ++ +G + +++W +++ K LK P H V+ +
Sbjct: 257 TTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKK-LKSEP-HQVDVSRI 314
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
D I+ D D + G MK ++ PV +F + +L + D +
Sbjct: 315 HLACD---ILEEEDDE-----DDNAGTEMK-ILRGHCGPVYSTRFLADSSGLLSCSEDMS 365
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCIS-STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282
+R W+ + Y GH + + S +S+ Y SGS D LW ++
Sbjct: 366 IRYWDLGSFTNTVLYQGHAYPVWDLDISPYSL----YFASGSHDRTARLWSFDRTYPLRI 421
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320
GH V V HP N +A+G+ D+TV++W+ ++
Sbjct: 422 YAGHLADVDCVKFHPNSNYLATGS--TDKTVRLWSAQQ 457
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 62/206 (30%), Positives = 106/206 (51%)
Query: 104 TATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTA 162
TA L+ ++ H + V + S ++ +G D V +W + C+ L H+ PV +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 163 VDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN 222
V N +IV S G R+WD ++TL+ + + + F P G+F+ G+ D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHK-ANICSLDFHPYGEFVASGSQDT 127
Query: 223 TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282
++LW+ + Y GH+ + C+ FS +GK++ S ++D V LW+L + K++ +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLR--FS-PDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 283 LEGHTDPVISVASHPTENIIASGALD 308
GHT PV V HP E ++ASG+ D
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 61/202 (30%), Positives = 102/202 (50%)
Query: 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + LW + C+ +L GHT+ V V N
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+IV+G+ ++R+WD++ K L+ L H + ++DF+ G + + S D ++W
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ + V ++FSP+GK++ D+T++LW+ + GK++ + GHT
Sbjct: 133 DIRRKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 191
Query: 245 KYCISSTFSVTNGKYIVSGSED 266
+ F N + SGS D
Sbjct: 192 VNVVE--FH-PNEYLLASGSSD 210
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 44/161 (27%), Positives = 72/161 (44%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
+L GH + SV+ + L+ + S L+ GH+ +
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQS--------GSIRVWDLEAAKILRTLMGHKANIC 109
Query: 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137
L F F+ S S D I+LWD+ C+ GH+ V C+ F+P + S A D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH 169
Query: 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD 178
TV++WD+ GK + P H+ PV V+F+ + ++ + S D
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 48/173 (27%), Positives = 90/173 (52%)
Query: 145 KTGKCLKVLPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPV 203
KT L+ + AH+ V+++ + G ++ T D +W + +C+ +L +P V
Sbjct: 8 KTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-V 66
Query: 204 SFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263
V+ + + I+ G+ ++R+W+ KIL+T GH + C S F G+++ SG
Sbjct: 67 ESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH-KANIC-SLDFH-PYGEFVASG 123
Query: 264 SEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
S+D+ + LW+++ + V + GH+ V + P +AS A +D TVK+W
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLW 174
Score = 154 (59.3 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 39/122 (31%), Positives = 57/122 (46%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + ++ GH Q
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQD--------TNIKLWDIRRKGCVFRYRGHSQ 148
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA 134
V L FS D ++L SA+DD T++LWD+ + GHT V V F+P ++ SG+
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 135 FD 136
D
Sbjct: 209 SD 210
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 305 (112.4 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 83/314 (26%), Positives = 147/314 (46%)
Query: 22 HLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVF 81
H A+ FS DG+ +AS ADK L HE V F
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK--------LLDIKAHEDEVLCCAF 665
Query: 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN--MIVSGAFDETV 139
SSD ++ + S DK +++WD T + T H+ V C +F +SN ++ +G+ D +
Sbjct: 666 SSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFL 725
Query: 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---- 195
++WD+ +C + H++ VT F+ D ++ + S DG ++WD + + K++
Sbjct: 726 KLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKR 785
Query: 196 --IDDENPP------VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS-KY 246
+ E+PP V +S +G I+V + L L +++G + + +TGH ++ +Y
Sbjct: 786 FFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHSTIQY 845
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306
C FS + +++ S+ CV LW + SR V GH V V P + + +
Sbjct: 846 C---DFSPYDHLAVIALSQ-YCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTAS 901
Query: 307 LDNDRTVKIWTQEK 320
+D+T+++W K
Sbjct: 902 --DDQTIRVWETRK 913
Score = 205 (77.2 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 68/234 (29%), Positives = 104/234 (44%)
Query: 21 GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLV 80
GH +A+ ++F+ DG+ L SSS D LQ H++ V D
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF------LQ---AHQETVKDFR 1051
Query: 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140
DSR L+S S D T+++W+V T + H V + + S + D+T +
Sbjct: 1052 LLRDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAK 1110
Query: 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG---H-CMKTLI 196
IW + L L H+ V F+ DG ++ T +G RIW+ S G H C I
Sbjct: 1111 IWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISI 1170
Query: 197 DDENPP----VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT-YTGHTNSK 245
++ V+ V FSP+ K ++ + L+ WN TG+ +T YT TN K
Sbjct: 1171 EEGTATHGGWVTDVCFSPDRKMLV--SAGGYLKWWNVVTGESSQTFYTNGTNLK 1222
Score = 200 (75.5 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 51/178 (28%), Positives = 90/178 (50%)
Query: 142 W-DVKTGKCLK--VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD 198
W + KT K L V+ H+D V F++DG I + D +++ A TG + +
Sbjct: 597 WINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAH 656
Query: 199 ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258
E+ V FS + +I ++D +++W+ TGK++ TY H+ C T + +N
Sbjct: 657 EDE-VLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFT-NKSNHL 714
Query: 259 YIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
+ +GS DS + LW+L ++ + GHT+ V P + ++AS + D T+K+W
Sbjct: 715 LLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADG--TLKLW 770
Score = 199 (75.1 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 74/330 (22%), Positives = 142/330 (43%)
Query: 3 SDQSLESFRPYTLTQTLN--GHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
+D++L+ F+ T + L+ H + FS D +A+ S DK
Sbjct: 635 ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKL--- 691
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSA--SDDKTIRLWDVPTATCLKTLIGHTNYV 118
+ + H + V+ F++ S L+ A S+D ++LWD+ C T+ GHTN V
Sbjct: 692 -----VHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSV 746
Query: 119 FCVNFNPQSNMIVSGAFDETVRIWDVKTG---KCLKV----LPAHSDP------VTAVDF 165
F+P ++ S + D T+++WDV++ K + V L + P V +
Sbjct: 747 THCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSW 806
Query: 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
+ DG I+ ++ + + + D T + + + + + FSP ++ +
Sbjct: 807 SADGDRIIVAAKNKVLLL-DIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVE 865
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LWN + + GH + + + FS +G ++ S+D + +WE +RKV +
Sbjct: 866 LWNIDSRVKVADCRGHLSWVHGVM--FS-PDGSSFLTASDDQTIRVWE--TRKVCKNSAI 920
Query: 286 HTDPVISVASHPTENIIASGALDNDRTVKI 315
I V E ++ A+DN R +++
Sbjct: 921 VLKQEIDVVFQENEMMVL--AVDNIRGLQL 948
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 44/208 (21%), Positives = 92/208 (44%)
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
E VS S ++ ++ I++ ++P + IGH V + F ++S
Sbjct: 961 EAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLIS 1020
Query: 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192
+ D +++W+ +T + + L AH + V RD ++ + S+DG ++W+ TG
Sbjct: 1021 SSEDSVIQVWNWQTEEYV-FLQAHQETVKDFRLLRDSRLL-SWSFDGTVKVWNVITGRIE 1078
Query: 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252
+ + +S S KF D T ++W++ L GH + C S F
Sbjct: 1079 RDFTCHQGTVLSCAISSDATKFSSTSA-DKTAKIWSFELPSPLHELKGHNSCVRC--SAF 1135
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVV 280
S+ +G + +G ++ + +W + +++
Sbjct: 1136 SL-DGILLATGDDNGEIRIWNVSDGQLL 1162
Score = 158 (60.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 71/314 (22%), Positives = 125/314 (39%)
Query: 18 TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVS 77
T+ GH +++ +FS D LLAS SAD F E
Sbjct: 738 TMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKRF--FLSSEDPPE 795
Query: 78 DLV-------FSSDSRFLVSASDDKTIRLWDVPTATCLKTL-IGHTNYVFCVNFNPQSNM 129
D+ +S+D ++ A+ +K + L D+ T+ L + GH + + +F+P ++
Sbjct: 796 DVEVIVKCCSWSADGDRIIVAAKNKVLLL-DIHTSGLLTEIHTGHHSTIQYCDFSPYDHL 854
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG 189
V V +W++ + + H V V F+ DG+ +T+S D R+W+
Sbjct: 855 AVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRKV 914
Query: 190 HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT--LRLWNYSTGKILKTYTGHTNSKYC 247
C + I + + V F N +L +DN L+L TG+I Y C
Sbjct: 915 -CKNSAIVLKQE-IDVV-FQENEMMVLA--VDNIRGLQLIAGKTGQI--DYLPEAQVSCC 967
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307
S +Y+ G E+ + + EL + +V GH V + + S +
Sbjct: 968 CLSPHL----EYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSS- 1022
Query: 308 DNDRTVKIWTQEKE 321
D +++W + E
Sbjct: 1023 -EDSVIQVWNWQTE 1035
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 43/199 (21%), Positives = 87/199 (43%)
Query: 118 VFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY 177
V C +P + G + ++I ++ + H V + F DG +++SS
Sbjct: 964 VSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSE 1023
Query: 178 DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT 237
D + ++W+ T + + V + + + +L + D T+++WN TG+I +
Sbjct: 1024 DSVIQVWNWQTEEYV--FLQAHQETVKDFRLLRDSR-LLSWSFDGTVKVWNVITGRIERD 1080
Query: 238 YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297
+T H + +S S K+ S S D +W + + +L+GH V A
Sbjct: 1081 FTCHQGT--VLSCAISSDATKFS-STSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSL 1137
Query: 298 TENIIASGALDNDRTVKIW 316
++A+G D++ ++IW
Sbjct: 1138 DGILLATG--DDNGEIRIW 1154
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/249 (21%), Positives = 107/249 (42%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V ++FS D ++ASDD+TIR+W+ C + I + V F M+
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWET-RKVCKNSAIVLKQEIDVV-FQENEMMV 937
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
++ +++ KTG+ + LP V+ + + +G +I +
Sbjct: 938 LAVDNIRGLQLIAGKTGQ-IDYLPEAQ--VSCCCLSPHLEYVAFGDEEGAIKIIELPNNR 994
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
+ I + V ++F+ +GK ++ + D+ +++WN+ T + + K
Sbjct: 995 VFSSGIGHKKA-VRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQETVK----- 1048
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310
F + ++S S D V +W + + ++ + H V+S A +S + D
Sbjct: 1049 DFRLLRDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSAD-- 1106
Query: 311 RTVKIWTQE 319
+T KIW+ E
Sbjct: 1107 KTAKIWSFE 1115
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 293 (108.2 bits), Expect = 9.1e-26, P = 9.1e-26
Identities = 77/306 (25%), Positives = 138/306 (45%)
Query: 20 NGHLRAISSVK-FSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
+GH + +S+V+ F G LL S S D L+ F GH + V D
Sbjct: 150 SGHTKGVSAVRLFPLSGHLLLSCSMD-------CKIKLWEVYGDRRCLRTFIGHSKAVRD 202
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP---QSNMIVSGAF 135
+ F++ +SA+ D+ ++LWD T C+ +CV FNP + N+ V+G
Sbjct: 203 ICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNR-KVPYCVKFNPDEDKQNLFVAGMS 261
Query: 136 DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
D+ + WD+++G+ ++ H V + F + V++S D R+W+ K +
Sbjct: 262 DKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYI 321
Query: 196 IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL---KTYTGHTNSKYCISSTF 252
+ + V SPNGK++ ++DN + ++ L K + GH + Y F
Sbjct: 322 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 381
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP--TENIIASGALDND 310
S + Y++SG + + +W+ ++ K+ + + H I HP T +I G D
Sbjct: 382 S-PDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW---D 437
Query: 311 RTVKIW 316
+K+W
Sbjct: 438 GLIKLW 443
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 56/267 (20%), Positives = 109/267 (40%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+T GH +A+ + F+ G S++ D+ + +FT +
Sbjct: 191 RTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQC--------ISRFTNRKVPY 242
Query: 77 SDLVFSSDS---RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+ F+ D V+ DK I WD+ + ++ H V + F ++ VS
Sbjct: 243 C-VKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVST 301
Query: 134 AFDETVRIWDVKTGKCLKVL--PA-HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+ D+++R+W+ K + P+ HS P AV + +G + S D I+ A
Sbjct: 302 SDDKSLRVWEWDIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRF 359
Query: 191 CM-KTLIDDENPPVSF---VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
+ K I + + V FSP+ +++ G + L +W++ T K+ + H K
Sbjct: 360 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAH--DKV 417
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWE 273
CI + + +++ D + LW+
Sbjct: 418 CIGAVWHPHETSKVITCGWDGLIKLWD 444
Score = 123 (48.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 44/191 (23%), Positives = 77/191 (40%)
Query: 3 SDQSLESF--RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
SD+ + + R + Q + HL A++++ F + R S+S DK
Sbjct: 261 SDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKY 320
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGH--T 115
+ + S + ++L S D I ++ L K GH
Sbjct: 321 IAEPSMHSMPA-------VTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVA 373
Query: 116 NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVT 174
Y V+F+P + ++SG + + IWD KT K AH + AV + + ++T
Sbjct: 374 GYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVIT 433
Query: 175 SSYDGLCRIWD 185
+DGL ++WD
Sbjct: 434 CGWDGLIKLWD 444
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 298 (110.0 bits), Expect = 9.1e-26, P = 9.1e-26
Identities = 65/216 (30%), Positives = 113/216 (52%)
Query: 101 DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPV 160
D T +K L GH V+ F S+ ++S + D ++R WD+++ + H+ PV
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPV 387
Query: 161 TAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL 220
+D + ++S+D R+W + ++ + V VKF PN ++ G+
Sbjct: 388 WDLDISPCSLYFASASHDRTARLWSFDRTYPLR-IYAGHLLDVDCVKFHPNSNYLATGST 446
Query: 221 DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV 280
D T+RLW+ G ++ +TGH ++ FS NGKY+ S ED + LW+L S +
Sbjct: 447 DKTVRLWSTQQGNSVRLFTGHRGPVLALA--FS-PNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 281 QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
++L GHTD + S+ P ++IAS ++DN +V++W
Sbjct: 504 KELRGHTDNITSLTFSPDSSLIASASMDN--SVRVW 537
Score = 274 (101.5 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 67/223 (30%), Positives = 108/223 (48%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH V F SDS L+S S+D +IR WD+ + T GH V+ ++ +P S
Sbjct: 340 GHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYF 399
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
S + D T R+W L++ H V V F+ + + T S D R+W G+
Sbjct: 400 ASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 459
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
++ L PV + FSPNGK++ D L+LW+ ++G + K GHT++ S
Sbjct: 460 SVR-LFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSL 516
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV 293
TFS + I S S D+ V +W++++ +G + ++ V
Sbjct: 517 TFS-PDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELVGV 558
Score = 267 (99.0 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 63/215 (29%), Positives = 100/215 (46%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T + L GH + S +F D L S S D + GH
Sbjct: 333 TEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVL--------YQGHA 384
Query: 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
V DL S S + SAS D+T RLW L+ GH V CV F+P SN + +G
Sbjct: 385 YPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATG 444
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ D+TVR+W + G +++ H PV A+ F+ +G + ++ D ++WD ++G K
Sbjct: 445 STDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYK 504
Query: 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
L ++ + FSP+ I ++DN++R+W+
Sbjct: 505 EL-RGHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 224 (83.9 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 51/192 (26%), Positives = 86/192 (44%)
Query: 2 SSDQSLE--SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXX 59
S D S+ R +T T GH + + S AS+S D+
Sbjct: 361 SEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYP-- 418
Query: 60 XXXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF 119
L+ + GH V + F +S +L + S DKT+RLW ++ GH V
Sbjct: 419 ------LRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVL 472
Query: 120 CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179
+ F+P + S D+ +++WD+ +G K L H+D +T++ F+ D ++I ++S D
Sbjct: 473 ALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN 532
Query: 180 LCRIWDASTGHC 191
R+WD +C
Sbjct: 533 SVRVWDIRNTYC 544
Score = 207 (77.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 65/248 (26%), Positives = 104/248 (41%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F EQ ++ S +S+ L + D+ ++LW + + K L + V +
Sbjct: 264 FYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRS----KKLKSEPHLVDVSRIRLACD 319
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188
++ DE D G +K+L H PV + F D + +++ S D R WD +
Sbjct: 320 IL-----DEEEEE-DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRS 373
Query: 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248
L PV + SP + + D T RLW++ L+ Y GH C+
Sbjct: 374 -FTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCV 432
Query: 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
F N Y+ +GS D V LW Q V+ GH PV+++A P +AS
Sbjct: 433 K--FH-PNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAG-- 487
Query: 309 NDRTVKIW 316
D+ +K+W
Sbjct: 488 EDQRLKLW 495
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 57/231 (24%), Positives = 95/231 (41%)
Query: 94 DKTIRLWDVP---TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL 150
D R+ D P T C + +P S ++ +G + V++W +++ K L
Sbjct: 244 DSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSKK-L 302
Query: 151 KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP 210
K P H V+ + D I+ + D S G MK ++ PV +F
Sbjct: 303 KSEP-HLVDVSRIRLACD---ILDEEEEE-----DDSAGTEMK-ILRGHCGPVYSTRFLS 352
Query: 211 NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS-STFSVTNGKYIVSGSEDSCV 269
+ +L + D ++R W+ + Y GH + + S S+ Y S S D
Sbjct: 353 DSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSL----YFASASHDRTA 408
Query: 270 YLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW-TQE 319
LW ++ GH V V HP N +A+G+ D+TV++W TQ+
Sbjct: 409 RLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGS--TDKTVRLWSTQQ 457
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 293 (108.2 bits), Expect = 9.7e-26, P = 9.7e-26
Identities = 77/306 (25%), Positives = 138/306 (45%)
Query: 20 NGHLRAISSVK-FSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSD 78
+GH + +S+V+ F G LL S S D L+ F GH + V D
Sbjct: 153 SGHTKGVSAVRLFPLSGHLLLSCSMD-------CKIKLWEVYGDRRCLRTFIGHSKAVRD 205
Query: 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP---QSNMIVSGAF 135
+ F++ +SA+ D+ ++LWD T C+ +CV FNP + N+ V+G
Sbjct: 206 ICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNR-KVPYCVKFNPDEDKQNLFVAGMS 264
Query: 136 DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195
D+ + WD+++G+ ++ H V + F + V++S D R+W+ K +
Sbjct: 265 DKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYI 324
Query: 196 IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL---KTYTGHTNSKYCISSTF 252
+ + V SPNGK++ ++DN + ++ L K + GH + Y F
Sbjct: 325 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 384
Query: 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP--TENIIASGALDND 310
S + Y++SG + + +W+ ++ K+ + + H I HP T +I G D
Sbjct: 385 S-PDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGW---D 440
Query: 311 RTVKIW 316
+K+W
Sbjct: 441 GLIKLW 446
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 56/267 (20%), Positives = 109/267 (40%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGV 76
+T GH +A+ + F+ G S++ D+ + +FT +
Sbjct: 194 RTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQC--------ISRFTNRKVPY 245
Query: 77 SDLVFSSDS---RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133
+ F+ D V+ DK I WD+ + ++ H V + F ++ VS
Sbjct: 246 C-VKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVST 304
Query: 134 AFDETVRIWDVKTGKCLKVL--PA-HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
+ D+++R+W+ K + P+ HS P AV + +G + S D I+ A
Sbjct: 305 SDDKSLRVWEWDIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRF 362
Query: 191 CM-KTLIDDENPPVSF---VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
+ K I + + V FSP+ +++ G + L +W++ T K+ + H K
Sbjct: 363 RLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAH--DKV 420
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWE 273
CI + + +++ D + LW+
Sbjct: 421 CIGAVWHPHETSKVITCGWDGLIKLWD 447
Score = 123 (48.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 44/191 (23%), Positives = 77/191 (40%)
Query: 3 SDQSLESF--RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXX 60
SD+ + + R + Q + HL A++++ F + R S+S DK
Sbjct: 264 SDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKY 323
Query: 61 XXXXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL---KTLIGH--T 115
+ + S + ++L S D I ++ L K GH
Sbjct: 324 IAEPSMHSMPA-------VTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVA 376
Query: 116 NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVT 174
Y V+F+P + ++SG + + IWD KT K AH + AV + + ++T
Sbjct: 377 GYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVIT 436
Query: 175 SSYDGLCRIWD 185
+DGL ++WD
Sbjct: 437 CGWDGLIKLWD 447
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 246 (91.7 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 56/207 (27%), Positives = 98/207 (47%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ + H +S F D+ +V++S D T LWD+ T +GHT + +P
Sbjct: 137 RELSAHTGYLSCCRFLDDNN-IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
+ +SGA D + ++WDV+ G C + H + A+ F +G I T S D CR++D
Sbjct: 196 FKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ T + ++ V FS +G+ + G D +W+ + + T +GH N
Sbjct: 256 RADQELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---ADGMAVATGSWDSFLKIW 339
Score = 239 (89.2 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 69/256 (26%), Positives = 121/256 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + +++DS+ LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+ +K+ G K + L AH+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG KT+ + SP+ K + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL--EGHTDPVISVASHPTENIIAS 304
I++ NG+ I +GS+D+ L++L++ + + E + SVA + ++ +
Sbjct: 229 -INAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIICGITSVAFSLSGRLLFA 287
Query: 305 GALDNDRTVKIWTQEK 320
G +D +W K
Sbjct: 288 GY--DDFNCNVWDSMK 301
Score = 197 (74.4 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 45/162 (27%), Positives = 79/162 (48%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F GH L S D + +S + D + +LWDV TC +T GH + + + F P
Sbjct: 180 FVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSD--PVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
I +G+ D + R++D++ + L S +T+V F+ G ++ D C +WD+
Sbjct: 240 AICTGSDDASCRLFDLRADQELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDS 299
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ TL +N VS + + +G + G+ D+ L++WN
Sbjct: 300 MKCERVGTLSGHDNR-VSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 179 (68.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 47/203 (23%), Positives = 89/203 (43%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + +WD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I+ + G+ + + +S +F + I+ + D T
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ + GHT C+S S + K +SG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQKTVFVGHTGD--CMSLAVS-PDFKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALD 308
H + ++ P I +G+ D
Sbjct: 225 HESDINAICFFPNGEAICTGSDD 247
Score = 143 (55.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC----VN 122
Q FTGHE ++ + F + + + SDD + RL+D+ L T H + + C V
Sbjct: 220 QTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTY-SHES-IICGITSVA 277
Query: 123 FNPQSNMIVSGAFDETVRIWDVKTGKCLKV--LPAHSDPVTAVDFNRDGTMIVTSSYDGL 180
F+ ++ +G D +WD + KC +V L H + V+ + DG + T S+D
Sbjct: 278 FSLSGRLLFAGYDDFNCNVWD--SMKCERVGTLSGHDNRVSCLGVTADGMAVATGSWDSF 335
Query: 181 CRIWD 185
+IW+
Sbjct: 336 LKIWN 340
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 34/136 (25%), Positives = 56/136 (41%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
R T QT GH I+++ F +G + + S D L ++
Sbjct: 214 REGTCRQTFTGHESDINAICFFPNGEAICTGSDD--------ASCRLFDLRADQELTTYS 265
Query: 71 GHEQ---GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
HE G++ + FS R L + DD +WD + TL GH N V C+
Sbjct: 266 -HESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSCLGVTADG 324
Query: 128 NMIVSGAFDETVRIWD 143
+ +G++D ++IW+
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 59 (25.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ ++ D +LL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQD 76
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 294 (108.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 90/312 (28%), Positives = 149/312 (47%)
Query: 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
P Q L H + V+FS+ G+ LA++S+D L+
Sbjct: 213 PSETVQILVAHKNEVWFVQFSNSGKYLATASSD--CTAIIWKVLDDNKVELKHTLES--- 267
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVN---FNPQSN 128
H+ VS + +S D L++ + + ++LWDV T L+ G+ N F V+ + P S
Sbjct: 268 HQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGV-LRHTFGNNNTGFTVSSCAWFPDST 326
Query: 129 MIVSGAFDET--VRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVTSSYDGLCRIWD 185
+V G+ D + +WD G +K P V + DG ++T D RI +
Sbjct: 327 RLVCGSSDPERGIVMWDTD-GNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILN 385
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS-TGKILKTYTGHTNS 244
T ++ +I +E P ++ + S +GKF +V + LW+ + K ++GH S
Sbjct: 386 LETK--VERVISEEQP-ITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQS 442
Query: 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304
KY I S F + +I SGSEDS VY+W L++ K ++ L GH+ V V+ +P + +
Sbjct: 443 KYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLA 502
Query: 305 GALDNDRTVKIW 316
A D D+T++IW
Sbjct: 503 SASD-DQTIRIW 513
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 293 (108.2 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 63/254 (24%), Positives = 128/254 (50%)
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
HE G +VF +S L + D+ +++WD + T +K+L G + + + ++
Sbjct: 224 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 283
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM-IVTSSYDGLCRIWDASTGH 190
+ + +WDV +G+ L H+D V AVD ++ + +V+++YD ++WD G+
Sbjct: 284 AATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGY 343
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250
C T++ N + + S +G + G +D LRLW+ TGK+L GH+++ ++S
Sbjct: 344 CTNTVLFTSN--CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSA---VTS 398
Query: 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH----PTENIIASGA 306
NG I++ D+ +++ ++ ++ L + + S S P ++ +A+G+
Sbjct: 399 VSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGS 458
Query: 307 LDNDRTVKIWTQEK 320
D +V +W+ K
Sbjct: 459 ADG--SVHVWSLSK 470
Score = 273 (101.2 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 79/322 (24%), Positives = 139/322 (43%)
Query: 3 SDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXX 62
+D +ES P T ++ H S+ F ++ L + D+
Sbjct: 205 TDHFVESTIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTL----- 259
Query: 63 XXXLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVN 122
++ G + D+ + D++ +++A+ + +WDV + TL GHT+ V V+
Sbjct: 260 ---IKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVD 316
Query: 123 FNP-QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181
+ S +VS A+D T+++WD+ G C + S+ A+ + DG + + DG
Sbjct: 317 VSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSN-CNAICLSIDGLTVFSGHMDGNL 375
Query: 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241
R+WD TG + + + V+ V S NG IL DN +++ T +I T
Sbjct: 376 RLWDIQTGKLLSE-VAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRAS 434
Query: 242 TN------SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
N S+ CIS + Y+ +GS D V++W L +V L+ T P++ +
Sbjct: 435 GNRLASNWSRSCISP-----DDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSW 489
Query: 296 HPTENIIASGALDNDRTVKIWT 317
+AS D + V WT
Sbjct: 490 SGIGKPLASA--DKNGYVCTWT 509
Score = 199 (75.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 57/232 (24%), Positives = 103/232 (44%)
Query: 88 LVSASDDKTIRLWD--VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145
+V ++D T + +P+ TC + H + F S + +G D V++WD
Sbjct: 197 IVRRNEDGTDHFVESTIPS-TCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTN 255
Query: 146 TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID--DENPPV 203
+G +K L + + D ++ ++ +WD S+G TL D+ V
Sbjct: 256 SGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAV 315
Query: 204 SFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT--YTGHTNSKYCISSTFSVTNGKYIV 261
KFS + ++ D T++LW+ G T +T + N+ C+S +G +
Sbjct: 316 DVSKFS--SRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNA-ICLS-----IDGLTVF 367
Query: 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313
SG D + LW++Q+ K++ ++ GH+ V SV+ N I + DN V
Sbjct: 368 SGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNV 419
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 9 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 65
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 66 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 125
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 126 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 183
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 184 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 237
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 238 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 282
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 55 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 106
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 107 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 165
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 166 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 225
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 226 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 281
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 282 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 315
Score = 220 (82.5 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 72
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 73 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 131
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 132 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 190
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 191 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 222
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 99 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 151
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 152 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 209
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 210 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 267
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 268 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 318
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 83/288 (28%), Positives = 138/288 (47%)
Query: 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + ++ S+S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L ++W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 81/275 (29%), Positives = 133/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V++W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 220 (82.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 110 TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V + PQ +MI+S + D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/231 (27%), Positives = 103/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK +++W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 296 (109.3 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 70/257 (27%), Positives = 124/257 (48%)
Query: 66 LQKFTGHEQGVSDLVFS-SDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124
LQ+ H VS LV S R L + DD + +W V L GHT + + +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRH-DLLTGHTTPIESLQIS 71
Query: 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184
+ +IV+G+ ++R+WD++ K L+ L H + ++DF+ G+ + + S D ++W
Sbjct: 72 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW 131
Query: 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244
D C+ V ++FSP+GK++ D+T++LW+ + GK++ +TGH
Sbjct: 132 DVRRKGCIFKY-KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 190
Query: 245 KYCISSTFSVTNGKYIV-SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303
+ S+ +Y++ SGS + W+L+ VV +E PV + +P +
Sbjct: 191 VNVVEFHPSI---EYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 247
Query: 304 SGALDNDRTVKIWTQEK 320
G D+ R V W E+
Sbjct: 248 GGFQDSLR-VYGWEPER 263
Score = 191 (72.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 51/183 (27%), Positives = 80/183 (43%)
Query: 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQ 74
+ +TL GH I S+ F G +AS S D + K+ H Q
Sbjct: 96 ILRTLLGHKANICSLDFHPYGSFVASGSLD--------TDIKLWDVRRKGCIFKYKSHTQ 147
Query: 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSG 133
V L FS D ++L SA+DD T++LWD+ + GH V V F+P ++ SG
Sbjct: 148 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASG 207
Query: 134 AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193
+ T+R WD++ + + + PV + FN DG + D L R++ C
Sbjct: 208 SSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERCFD 266
Query: 194 TLI 196
++
Sbjct: 267 VVV 269
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 227 (85.0 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 54/176 (30%), Positives = 92/176 (52%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + F ++ ++VSASDD+TIR+W+ + TC+ L GH +YV C +F+P+ +++
Sbjct: 91 GHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
Query: 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190
VS + D+TVR+WD+ K PA D + N D + G+ DA
Sbjct: 151 VSASLDQTVRVWDIGALKKKSASPA-DDLMRFSQMNSD-------LFGGV----DA---- 194
Query: 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI--LKTYTGHTNS 244
+K +++ + V++ F P I+ G D ++LW + K + T GH N+
Sbjct: 195 IVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN 250
Score = 217 (81.4 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP 125
+ +F HE V + F + VS DD I++W+ T CL TL+GH +Y+ V F+
Sbjct: 44 IDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHH 103
Query: 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185
++ IVS + D+T+RIW+ ++ C+ VL H+ V F+ ++V++S D R+WD
Sbjct: 104 ENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 211 (79.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 54/163 (33%), Positives = 85/163 (52%)
Query: 157 SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID--DENP-PVSFVKFSPNGK 213
S+ V + F+ I+ S + G+ ++WD G TLID DE+ PV V F +
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMG----TLIDRFDEHEGPVRGVHFHNSQP 64
Query: 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273
+ G D +++WNY T + L T GH + Y + F N +IVS S+D + +W
Sbjct: 65 LFVSGGDDYKIKVWNYKTHRCLFTLLGHLD--YIRTVQFHHEN-PWIVSASDDQTIRIWN 121
Query: 274 LQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
QSR + L GH V+ + HP E+++ S +LD +TV++W
Sbjct: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLD--QTVRVW 162
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 40/164 (24%), Positives = 80/164 (48%)
Query: 115 TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174
+N V ++F+P+ I++ +++WD + G + H PV V F+ + V+
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVS 68
Query: 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI 234
D ++W+ T C+ TL+ + + V+F +I+ + D T+R+WN+ +
Sbjct: 69 GGDDYKIKVWNYKTHRCLFTLLGHLDY-IRTVQFHHENPWIVSASDDQTIRIWNWQSRTC 127
Query: 235 LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278
+ TGH + Y + ++F +VS S D V +W++ + K
Sbjct: 128 ISVLTGHNH--YVMCASFHPKED-LVVSASLDQTVRVWDIGALK 168
Score = 131 (51.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC--LKTLIGHTNYVFCVNFNPQSN 128
GH++GV+ F +VS +DD+ ++LW + + TL GH N V V F+ + +
Sbjct: 202 GHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQD 261
Query: 129 MIVSGAFDETVRIWDV--KTG 147
+IVS + D+++R+WD +TG
Sbjct: 262 IIVSNSEDKSIRVWDATKRTG 282
Score = 127 (49.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI--LKTYTGHTNSKYCIS 249
+K +++ + V++ F P I+ G D ++LW + K + T GH N+ +S
Sbjct: 196 VKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN---VS 252
Query: 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309
S IVS SED + +W+ R +Q D +A HP N++A+G +
Sbjct: 253 SVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAG---H 309
Query: 310 DRTVKIWTQEKE 321
D + ++ E+E
Sbjct: 310 DNGMIVFKLERE 321
Score = 119 (46.9 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV--LPAHSDPVTAVDFNRD 168
L GH V +F+P +IVSGA D V++W + K +V L H + V++V F+
Sbjct: 200 LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259
Query: 169 GTMIVTSSYDGLCRIWDAS 187
+IV++S D R+WDA+
Sbjct: 260 QDIIVSNSEDKSIRVWDAT 278
Score = 90 (36.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 26/94 (27%), Positives = 42/94 (44%)
Query: 9 SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQK 68
+++ + TL GHL I +V+F H+ + S+S D+ +
Sbjct: 79 NYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTC--------ISV 130
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102
TGH V F +VSAS D+T+R+WD+
Sbjct: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 42 (19.8 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287
N+ L TG+ + +S + K V G + +YL +++ R + + GH
Sbjct: 701 NFERLSFLYLITGNLDK---LSKLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHL 757
Query: 288 DPVISVAS-HPTENIIASGALD 308
AS H +I A++
Sbjct: 758 PLAYITASVHGLTDIAERLAIE 779
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 84/288 (29%), Positives = 135/288 (46%)
Query: 14 TLTQTLNGHLRAISSVK-FSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGH 72
TL TL GH ++ + + RL S DK L+ GH
Sbjct: 6 TLRGTLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALR---GH 62
Query: 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS 132
VSD+V SSD +F +S S D T+RLWD+ T T + +GHT V V F+ + IVS
Sbjct: 63 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVS 122
Query: 133 GAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDAST 188
G+ D+T+++W+ G C + +HS+ V+ V F N +IV+ +D L +W+ +
Sbjct: 123 GSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLA- 180
Query: 189 GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247
+C +KT ++ V SP+G G D LW+ + GK L T G
Sbjct: 181 -NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----- 234
Query: 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295
I + + +Y + + + +W+L+ + +V +L+ VIS +S
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK---QEVISTSS 279
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 81/275 (29%), Positives = 132/275 (48%)
Query: 13 YTLTQ-TLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTG 71
Y + Q L GH +S V S DG+ S S D ++F G
Sbjct: 52 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--------RRFVG 103
Query: 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSN- 128
H + V + FSSD+R +VS S DKTI+LW+ C T+ H+ +V CV F+P S+
Sbjct: 104 HTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 129 -MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187
+IVS +D+ V +W++ K H+ + V + DG++ + DG +WD +
Sbjct: 163 PIIVSCGWDKLVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222
Query: 188 TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI----LKTYTGHTN 243
G + TL D ++ + FSPN ++ L ++++W+ GKI LK T+
Sbjct: 223 EGKHLYTL--DGGDIINALCFSPN-RYWLCAATGPSIKIWDLE-GKIIVDELKQEVISTS 278
Query: 244 SK----YCISSTFSVTNGKYIVSGSEDSCVYLWEL 274
SK C S +S +G+ + +G D+ V +W++
Sbjct: 279 SKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQV 312
Score = 200 (75.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 59/214 (27%), Positives = 102/214 (47%)
Query: 110 TLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIW-----DVKTGKCLKVLPAHSDPVTAV 163
TL GH +V ++ + ++ + +S D+T+ +W + G + L HS V+ V
Sbjct: 10 TLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223
+ DG ++ S+DG R+WD +TG + + +S V FS + + I+ G+ D T
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLS-VAFSSDNRQIVSGSRDKT 128
Query: 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQK 282
++LWN + G T ++S++ FS + IVS D V +W L + K+
Sbjct: 129 IKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTN 187
Query: 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316
GHT + +V P ++ ASG D +W
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQ--AMLW 219
Score = 192 (72.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 64/231 (27%), Positives = 102/231 (44%)
Query: 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHE 73
T T+ GH + + SV FS D R + S S DK +Q H
Sbjct: 96 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT------VQD-ESHS 148
Query: 74 QGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATC-LKTL-IGHTNYVFCVNFNPQSNM 129
+ VS + FS +S +VS DK + +W++ A C LKT IGHT Y+ V +P ++
Sbjct: 149 EWVSCVRFSPNSSNPIIVSCGWDKLVNVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 130 IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-- 187
SG D +WD+ GK L L D + A+ F+ + + ++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSI-KIWDLEGK 264
Query: 188 ------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232
+ T E P + + +S +G+ + G DN +R+W + G
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 315
>WB|WBGene00018014 [details] [associations]
symbol:F33G12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0019915 HSSP:P16649
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 KO:K13124
OMA:CKQGAVR EMBL:FO080686 RefSeq:NP_494926.1
ProteinModelPortal:Q19986 SMR:Q19986 IntAct:Q19986 STRING:Q19986
EnsemblMetazoa:F33G12.2 GeneID:173867 KEGG:cel:CELE_F33G12.2
UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2 InParanoid:Q19986
NextBio:881457 Uniprot:Q19986
Length = 305
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 80/300 (26%), Positives = 148/300 (49%)
Query: 25 AISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVFSSD 84
A+ +V+++ DG + +DK L+ ++G V D SSD
Sbjct: 18 AVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSL--------LKTYSGTGNEVLDAASSSD 69
Query: 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144
+ + + D+ ++DV T L+ H V V FN +S+++ SG+ D T++ +D
Sbjct: 70 NSQIAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDC 129
Query: 145 KTG--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP 202
++ K +++ +D + ++D N G IV S DG R++ G+ + D
Sbjct: 130 RSRSEKPIQIFNESTDGILSIDVN--GHEIVAGSADGNYRVYSIRDGNMTVDYMGDS--- 184
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
V+ V F+P+ +L G + +RL + S+GK+L +Y GH N++Y + + + +++ S
Sbjct: 185 VNSVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRV-LQSIEHVAS 243
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVI-SVASHPTENIIASGALDNDRTVKIWTQEKE 321
GSED VY++ L +V KLE H VI S+ +HP + + + A + + +W E +
Sbjct: 244 GSEDGFVYVYSLLDSHIVSKLE-HPSKVIHSLTAHPKKERLMTAA---GQMIYLWVAEDD 299
Score = 201 (75.8 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 58/239 (24%), Positives = 110/239 (46%)
Query: 73 EQGVSDLV-FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+QG V ++ D + V+ DKT++LW+ ++ LKT G N V + ++ I
Sbjct: 15 KQGAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIA 74
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
+G D ++DV+TGK L+ H V AV FN + +++ + S D + +D +
Sbjct: 75 AGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRSE 134
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
I +E+ + NG I+ G+ D R+++ G + Y G + ++S
Sbjct: 135 KPIQIFNESTD-GILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMGDS-----VNSV 188
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENI--IASGALD 308
+ +++G V L + S K++ +GH + + ++I +ASG+ D
Sbjct: 189 SFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEHVASGSED 247
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 28/113 (24%), Positives = 61/113 (53%)
Query: 196 IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT 255
ID + V V+++ +G + + D T++LWN +LKTY+G N + + S
Sbjct: 12 IDCKQGAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNE--VLDAASSSD 69
Query: 256 NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
N + G++ +C ++++++ K +++ H V +VA + +++ SG++D
Sbjct: 70 NSQIAAGGADRACT-VFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMD 121
>UNIPROTKB|Q19986 [details] [associations]
symbol:F33G12.2 "Protein F33G12.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0019915 HSSP:P16649 GeneTree:ENSGT00700000104496
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR EMBL:FO080686
RefSeq:NP_494926.1 ProteinModelPortal:Q19986 SMR:Q19986
IntAct:Q19986 STRING:Q19986 EnsemblMetazoa:F33G12.2 GeneID:173867
KEGG:cel:CELE_F33G12.2 UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2
InParanoid:Q19986 NextBio:881457 Uniprot:Q19986
Length = 305
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 80/300 (26%), Positives = 148/300 (49%)
Query: 25 AISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFTGHEQGVSDLVFSSD 84
A+ +V+++ DG + +DK L+ ++G V D SSD
Sbjct: 18 AVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSL--------LKTYSGTGNEVLDAASSSD 69
Query: 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144
+ + + D+ ++DV T L+ H V V FN +S+++ SG+ D T++ +D
Sbjct: 70 NSQIAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDC 129
Query: 145 KTG--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP 202
++ K +++ +D + ++D N G IV S DG R++ G+ + D
Sbjct: 130 RSRSEKPIQIFNESTDGILSIDVN--GHEIVAGSADGNYRVYSIRDGNMTVDYMGDS--- 184
Query: 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262
V+ V F+P+ +L G + +RL + S+GK+L +Y GH N++Y + + + +++ S
Sbjct: 185 VNSVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRV-LQSIEHVAS 243
Query: 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVI-SVASHPTENIIASGALDNDRTVKIWTQEKE 321
GSED VY++ L +V KLE H VI S+ +HP + + + A + + +W E +
Sbjct: 244 GSEDGFVYVYSLLDSHIVSKLE-HPSKVIHSLTAHPKKERLMTAA---GQMIYLWVAEDD 299
Score = 201 (75.8 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 58/239 (24%), Positives = 110/239 (46%)
Query: 73 EQGVSDLV-FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV 131
+QG V ++ D + V+ DKT++LW+ ++ LKT G N V + ++ I
Sbjct: 15 KQGAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIA 74
Query: 132 SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191
+G D ++DV+TGK L+ H V AV FN + +++ + S D + +D +
Sbjct: 75 AGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDCRSRSE 134
Query: 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251
I +E+ + NG I+ G+ D R+++ G + Y G + ++S
Sbjct: 135 KPIQIFNESTD-GILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMGDS-----VNSV 188
Query: 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENI--IASGALD 308
+ +++G V L + S K++ +GH + + ++I +ASG+ D
Sbjct: 189 SFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEHVASGSED 247
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 28/113 (24%), Positives = 61/113 (53%)
Query: 196 IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT 255
ID + V V+++ +G + + D T++LWN +LKTY+G N + + S
Sbjct: 12 IDCKQGAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNE--VLDAASSSD 69
Query: 256 NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308
N + G++ +C ++++++ K +++ H V +VA + +++ SG++D
Sbjct: 70 NSQIAAGGADRACT-VFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMD 121
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 242 (90.2 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 55/207 (26%), Positives = 97/207 (46%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ 126
++ + H +S F D+ +V++S D T LWD+ T +GHT + +P
Sbjct: 137 RELSAHTGYLSCCRFLDDNN-IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD 195
Query: 127 SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
N+ +SGA D + ++WDV+ G C + H + A+ F +G I T S D CR++D
Sbjct: 196 FNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDL 255
Query: 187 STGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245
+ + ++ V FS +G+ + G D +W+ + + +GH N
Sbjct: 256 RADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRV 315
Query: 246 YCISSTFSVTNGKYIVSGSEDSCVYLW 272
C+ T +G + +GS DS + +W
Sbjct: 316 SCLGVT---ADGMAVATGSWDSFLKIW 339
Score = 233 (87.1 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 68/256 (26%), Positives = 121/256 (47%)
Query: 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI 130
GH + + +++DS+ LVSAS D + +WD T + + +++V + P N +
Sbjct: 53 GHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 131 VSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186
G D I+++K+ G K + L AH+ ++ F D IVTSS D C +WD
Sbjct: 113 ACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDTTCALWDI 171
Query: 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246
TG KT+ + SP+ + G D + +LW+ G +T+TGH +
Sbjct: 172 ETGQ-QKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESD-- 228
Query: 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRK--VVQKLEGHTDPVISVASHPTENIIAS 304
I++ NG+ I +GS+D+ L++L++ + + E + SVA + ++ +
Sbjct: 229 -INAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFA 287
Query: 305 GALDNDRTVKIWTQEK 320
G +D +W K
Sbjct: 288 GY--DDFNCNVWDSMK 301
Score = 192 (72.6 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 44/163 (26%), Positives = 79/163 (48%)
Query: 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN 128
F GH L S D +S + D + +LWDV TC +T GH + + + F P
Sbjct: 180 FVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSD---PVTAVDFNRDGTMIVTSSYDGLCRIWD 185
I +G+ D + R++D++ + L + +H +T+V F+ G ++ D C +WD
Sbjct: 240 AICTGSDDASCRLFDLRADQEL-ICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
Query: 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228
+ + L +N VS + + +G + G+ D+ L++WN
Sbjct: 299 SMKSERVGILSGHDNR-VSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 173 (66.0 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 47/203 (23%), Positives = 89/203 (43%)
Query: 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168
+TL GH ++ +++ S ++VS + D + +WD T + +P S V +
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 169 GTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225
G + D +C I++ + G+ + + +S +F + I+ + D T
Sbjct: 109 GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTSSGDTTCA 167
Query: 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285
LW+ TG+ + GHT C+S S +I SG+ D+ LW+++ Q G
Sbjct: 168 LWDIETGQQKTVFVGHTGD--CMSLAVSPDFNLFI-SGACDASAKLWDVREGTCRQTFTG 224
Query: 286 HTDPVISVASHPTENIIASGALD 308
H + ++ P I +G+ D
Sbjct: 225 HESDINAICFFPNGEAICTGSDD 247
Score = 141 (54.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC----VN 122
Q FTGHE ++ + F + + + SDD + RL+D+ L H + + C V
Sbjct: 220 QTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQEL-ICFSHES-IICGITSVA 277
Query: 123 FNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182
F+ ++ +G D +WD + + +L H + V+ + DG + T S+D +
Sbjct: 278 FSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLK 337
Query: 183 IWD 185
IW+
Sbjct: 338 IWN 340
Score = 112 (44.5 bits), Expect = 0.00084, P = 0.00084
Identities = 34/136 (25%), Positives = 56/136 (41%)
Query: 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKXXXXXXXXXXXXXXXXXXXXLQKFT 70
R T QT GH I+++ F +G + + S D L F+
Sbjct: 214 REGTCRQTFTGHESDINAICFFPNGEAICTGSDD--------ASCRLFDLRADQELICFS 265
Query: 71 GHEQ---GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127
HE G++ + FS R L + DD +WD + + L GH N V C+
Sbjct: 266 -HESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADG 324
Query: 128 NMIVSGAFDETVRIWD 143
+ +G++D ++IW+
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 59 (25.8 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 17 QTLNGHLRAISSVKFSHDGRLLASSSAD 44
+TL GHL I ++ ++ D +LL S+S D
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQD 76
WARNING: HSPs involving 1836 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 321 301 0.00096 115 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2086
No. of states in DFA: 602 (64 KB)
Total size of DFA: 224 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.64u 0.10s 24.74t Elapsed: 00:00:01
Total cpu time: 24.78u 0.10s 24.88t Elapsed: 00:00:01
Start: Fri May 10 09:04:33 2013 End: Fri May 10 09:04:34 2013
WARNINGS ISSUED: 2