Query 020798
Match_columns 321
No_of_seqs 351 out of 2051
Neff 11.4
Searched_HMMs 46136
Date Fri Mar 29 05:14:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020798.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020798hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271 Notchless-like WD40 re 100.0 4.1E-54 9E-59 334.6 28.2 289 15-317 107-479 (480)
2 KOG0272 U4/U6 small nuclear ri 100.0 3.9E-53 8.5E-58 332.8 20.1 297 8-317 160-458 (459)
3 KOG0286 G-protein beta subunit 100.0 2.9E-48 6.2E-53 292.2 33.3 291 14-317 46-343 (343)
4 KOG0266 WD40 repeat-containing 100.0 2.5E-45 5.5E-50 315.4 35.9 304 11-320 146-455 (456)
5 KOG0272 U4/U6 small nuclear ri 100.0 2.5E-46 5.5E-51 294.5 20.0 260 2-273 194-458 (459)
6 KOG0293 WD40 repeat-containing 100.0 3.5E-45 7.6E-50 287.5 23.6 298 12-319 213-513 (519)
7 KOG0279 G protein beta subunit 100.0 3.4E-43 7.3E-48 263.2 32.4 294 15-320 7-314 (315)
8 KOG0316 Conserved WD40 repeat- 100.0 1.5E-43 3.3E-48 259.2 26.2 292 12-320 6-300 (307)
9 KOG0271 Notchless-like WD40 re 100.0 4.4E-44 9.5E-49 278.9 24.2 251 66-320 108-440 (480)
10 KOG0315 G-protein beta subunit 100.0 1.3E-42 2.7E-47 256.3 28.5 270 36-320 11-289 (311)
11 KOG0284 Polyadenylation factor 100.0 1E-44 2.2E-49 284.3 18.4 285 21-319 94-380 (464)
12 KOG0282 mRNA splicing factor [ 100.0 1.1E-44 2.3E-49 289.9 17.9 299 8-317 199-503 (503)
13 KOG0265 U5 snRNP-specific prot 100.0 2.6E-42 5.6E-47 261.0 28.2 287 17-315 41-334 (338)
14 KOG0295 WD40 repeat-containing 100.0 1.2E-42 2.6E-47 269.1 25.8 291 13-317 98-404 (406)
15 KOG0285 Pleiotropic regulator 100.0 1.8E-42 4E-47 267.7 26.5 299 5-319 133-439 (460)
16 KOG0273 Beta-transducin family 100.0 1.7E-41 3.6E-46 270.8 27.8 301 13-319 169-482 (524)
17 cd00200 WD40 WD40 domain, foun 100.0 4.6E-40 1E-44 268.8 36.7 287 17-317 3-289 (289)
18 KOG0645 WD40 repeat protein [G 100.0 2.4E-40 5.2E-45 247.0 31.0 289 14-319 5-311 (312)
19 KOG0318 WD40 repeat stress pro 100.0 6.4E-40 1.4E-44 265.1 32.7 297 11-321 178-562 (603)
20 KOG0286 G-protein beta subunit 100.0 3.2E-40 6.9E-45 248.9 28.5 251 17-273 91-343 (343)
21 KOG0263 Transcription initiati 100.0 1.7E-41 3.6E-46 286.5 24.1 273 23-320 378-650 (707)
22 KOG0273 Beta-transducin family 100.0 5.7E-40 1.2E-44 262.1 31.0 280 23-319 235-523 (524)
23 KOG0315 G-protein beta subunit 100.0 9.5E-40 2.1E-44 241.1 29.0 283 3-296 18-309 (311)
24 KOG0296 Angio-associated migra 100.0 1.1E-39 2.5E-44 252.7 30.7 291 14-319 55-398 (399)
25 KOG0279 G protein beta subunit 100.0 5.9E-40 1.3E-44 245.9 26.5 248 15-275 55-313 (315)
26 PLN00181 protein SPA1-RELATED; 100.0 1.7E-38 3.8E-43 292.1 40.2 292 19-318 479-792 (793)
27 KOG0275 Conserved WD40 repeat- 100.0 2.8E-41 6.1E-46 258.6 17.3 308 6-317 195-507 (508)
28 KOG0291 WD40-repeat-containing 100.0 2.7E-38 6E-43 265.7 33.0 288 19-320 261-551 (893)
29 KOG0291 WD40-repeat-containing 100.0 9.4E-38 2E-42 262.5 35.4 299 9-318 131-507 (893)
30 KOG0643 Translation initiation 100.0 1.1E-38 2.4E-43 237.8 24.8 288 18-320 5-318 (327)
31 KOG0319 WD40-repeat-containing 100.0 7.4E-39 1.6E-43 268.4 24.5 303 1-318 299-618 (775)
32 KOG0278 Serine/threonine kinas 100.0 9.4E-39 2E-43 236.1 17.6 285 17-319 8-297 (334)
33 KOG1446 Histone H3 (Lys4) meth 100.0 7.2E-36 1.6E-40 227.9 32.8 294 8-319 2-303 (311)
34 KOG0263 Transcription initiati 100.0 7.1E-38 1.5E-42 264.6 24.0 211 13-232 441-651 (707)
35 KOG0283 WD40 repeat-containing 100.0 5.2E-37 1.1E-41 261.3 27.2 259 14-276 257-577 (712)
36 KOG0292 Vesicle coat complex C 100.0 7.4E-37 1.6E-41 261.2 27.7 288 20-321 6-323 (1202)
37 KOG0295 WD40 repeat-containing 100.0 9E-38 1.9E-42 242.1 20.0 253 65-320 100-365 (406)
38 KOG0640 mRNA cleavage stimulat 100.0 4.9E-37 1.1E-41 233.8 23.1 300 17-319 106-426 (430)
39 KOG0318 WD40 repeat stress pro 100.0 1.4E-35 3.1E-40 240.1 32.8 298 10-320 46-351 (603)
40 KOG0281 Beta-TrCP (transducin 100.0 1.8E-38 4E-43 245.0 15.1 271 22-320 196-478 (499)
41 KOG1407 WD40 repeat protein [F 100.0 1.2E-35 2.7E-40 220.8 28.2 300 6-319 4-311 (313)
42 KOG0313 Microtubule binding pr 100.0 3E-36 6.4E-41 234.9 24.6 280 21-319 103-418 (423)
43 KOG0319 WD40-repeat-containing 100.0 3E-36 6.5E-41 252.9 25.7 299 16-320 185-578 (775)
44 KOG0276 Vesicle coat complex C 100.0 3.8E-36 8.2E-41 248.1 24.7 281 14-306 4-288 (794)
45 KOG0265 U5 snRNP-specific prot 100.0 1.1E-35 2.4E-40 225.1 25.2 250 63-319 37-296 (338)
46 KOG0266 WD40 repeat-containing 100.0 3.2E-35 6.9E-40 253.0 30.5 244 72-319 158-409 (456)
47 KOG0772 Uncharacterized conser 100.0 1.3E-35 2.9E-40 239.8 26.1 308 6-319 150-487 (641)
48 KOG0284 Polyadenylation factor 100.0 2.9E-37 6.3E-42 242.6 15.5 247 15-274 130-379 (464)
49 KOG0306 WD40-repeat-containing 100.0 4.6E-35 9.9E-40 246.3 27.5 287 17-320 367-665 (888)
50 KOG0276 Vesicle coat complex C 100.0 2E-35 4.4E-40 243.8 23.5 249 67-318 7-256 (794)
51 KOG0316 Conserved WD40 repeat- 100.0 4.7E-35 1E-39 214.8 21.8 247 65-321 9-259 (307)
52 KOG0288 WD40 repeat protein Ti 100.0 7.7E-36 1.7E-40 234.9 18.8 294 11-317 163-459 (459)
53 KOG0285 Pleiotropic regulator 100.0 3.5E-35 7.7E-40 227.5 21.9 247 66-320 144-390 (460)
54 cd00200 WD40 WD40 domain, foun 100.0 2.4E-33 5.3E-38 229.0 32.5 247 67-319 3-249 (289)
55 PTZ00421 coronin; Provisional 100.0 3.3E-33 7.2E-38 239.8 34.3 277 21-299 18-315 (493)
56 KOG0310 Conserved WD40 repeat- 100.0 5.5E-34 1.2E-38 228.9 26.4 292 6-316 10-306 (487)
57 KOG0281 Beta-TrCP (transducin 100.0 3.7E-36 8.1E-41 232.3 12.8 232 72-320 196-429 (499)
58 KOG0973 Histone transcription 100.0 1.9E-33 4E-38 245.7 28.2 298 21-320 11-356 (942)
59 KOG0294 WD40 repeat-containing 100.0 5.4E-33 1.2E-37 212.0 26.1 272 37-320 3-282 (362)
60 KOG0645 WD40 repeat protein [G 100.0 3.6E-32 7.9E-37 203.4 28.6 243 66-319 7-261 (312)
61 KOG0274 Cdc4 and related F-box 100.0 1E-32 2.2E-37 237.2 29.3 274 22-320 207-483 (537)
62 KOG0299 U3 snoRNP-associated p 100.0 9E-33 2E-37 220.5 26.2 286 17-306 136-444 (479)
63 PLN00181 protein SPA1-RELATED; 100.0 4.6E-32 9.9E-37 249.8 34.8 264 44-319 457-738 (793)
64 PTZ00420 coronin; Provisional 100.0 1.5E-31 3.2E-36 230.8 34.4 248 41-300 50-319 (568)
65 KOG0289 mRNA splicing factor [ 100.0 3.2E-32 6.9E-37 215.9 27.3 283 23-318 219-505 (506)
66 KOG0296 Angio-associated migra 100.0 1.8E-32 3.9E-37 212.9 25.1 247 15-275 98-398 (399)
67 KOG0283 WD40 repeat-containing 100.0 6.6E-33 1.4E-37 236.5 24.2 247 67-319 260-576 (712)
68 KOG0277 Peroxisomal targeting 100.0 6.7E-33 1.4E-37 205.6 20.5 279 27-318 12-308 (311)
69 KOG0282 mRNA splicing factor [ 100.0 4.4E-34 9.6E-39 229.2 15.2 251 62-319 203-462 (503)
70 KOG0301 Phospholipase A2-activ 100.0 4E-32 8.7E-37 226.8 26.7 286 11-320 2-289 (745)
71 KOG0277 Peroxisomal targeting 100.0 4.7E-33 1E-37 206.4 18.6 243 23-274 60-308 (311)
72 KOG0647 mRNA export protein (c 100.0 2.5E-31 5.5E-36 201.8 27.7 274 22-305 26-311 (347)
73 KOG0292 Vesicle coat complex C 100.0 2.2E-31 4.8E-36 228.0 30.3 295 12-317 40-395 (1202)
74 KOG0641 WD40 repeat protein [G 100.0 5.1E-30 1.1E-34 187.6 33.1 292 22-319 31-349 (350)
75 PTZ00421 coronin; Provisional 100.0 3E-31 6.6E-36 227.7 31.0 221 18-239 70-299 (493)
76 KOG0305 Anaphase promoting com 100.0 1.4E-31 3.1E-36 222.5 27.0 273 28-318 182-460 (484)
77 KOG0306 WD40-repeat-containing 100.0 2.2E-31 4.7E-36 224.3 28.3 279 23-319 65-484 (888)
78 KOG0278 Serine/threonine kinas 100.0 1.7E-32 3.6E-37 203.1 16.8 252 12-279 48-301 (334)
79 KOG0294 WD40 repeat-containing 100.0 1.8E-30 3.9E-35 198.3 26.9 260 19-295 39-305 (362)
80 KOG0300 WD40 repeat-containing 100.0 2.4E-31 5.1E-36 203.7 21.8 292 13-319 138-476 (481)
81 KOG1407 WD40 repeat protein [F 100.0 3.8E-31 8.2E-36 197.0 22.0 243 67-317 14-259 (313)
82 KOG0293 WD40 repeat-containing 100.0 1.4E-31 3.1E-36 211.1 20.8 253 62-321 213-472 (519)
83 KOG0268 Sof1-like rRNA process 100.0 2.9E-32 6.2E-37 211.7 15.6 284 15-319 58-345 (433)
84 PTZ00420 coronin; Provisional 100.0 1.2E-29 2.5E-34 219.1 33.3 226 91-320 50-294 (568)
85 KOG0305 Anaphase promoting com 100.0 1.4E-30 3.1E-35 216.5 26.3 241 22-277 216-463 (484)
86 KOG1446 Histone H3 (Lys4) meth 100.0 1.9E-29 4.1E-34 193.0 29.9 248 68-320 9-263 (311)
87 KOG0308 Conserved WD40 repeat- 100.0 2.7E-31 5.9E-36 220.4 20.6 289 22-319 20-327 (735)
88 KOG0313 Microtubule binding pr 100.0 2.3E-30 4.9E-35 202.2 24.4 253 13-275 134-418 (423)
89 KOG1408 WD40 repeat protein [F 100.0 9.5E-31 2.1E-35 219.6 21.9 281 37-319 394-713 (1080)
90 KOG1036 Mitotic spindle checkp 100.0 3.1E-29 6.7E-34 191.0 28.1 270 23-306 13-293 (323)
91 KOG2096 WD40 repeat protein [G 100.0 7.5E-30 1.6E-34 195.3 24.3 291 17-317 80-400 (420)
92 KOG0289 mRNA splicing factor [ 100.0 1.6E-29 3.4E-34 200.7 25.0 251 13-274 251-505 (506)
93 KOG0274 Cdc4 and related F-box 100.0 1.6E-29 3.4E-34 217.6 27.0 260 5-285 228-492 (537)
94 KOG0310 Conserved WD40 repeat- 100.0 1.1E-29 2.3E-34 204.4 23.5 241 19-273 64-307 (487)
95 KOG0643 Translation initiation 100.0 5.6E-29 1.2E-33 186.1 25.6 233 68-306 5-250 (327)
96 KOG0275 Conserved WD40 repeat- 100.0 1.5E-30 3.2E-35 199.9 16.9 244 71-318 211-466 (508)
97 KOG0647 mRNA export protein (c 100.0 4.7E-29 1E-33 189.5 23.3 240 72-319 26-281 (347)
98 KOG0639 Transducin-like enhanc 100.0 1.5E-29 3.3E-34 204.5 21.8 282 21-317 417-702 (705)
99 KOG1273 WD40 repeat protein [G 100.0 1.8E-28 3.8E-33 187.6 23.6 292 12-319 14-322 (405)
100 KOG0264 Nucleosome remodeling 100.0 1.1E-28 2.3E-33 197.1 22.6 254 20-275 121-404 (422)
101 KOG0973 Histone transcription 100.0 1.6E-28 3.4E-33 215.1 24.2 261 15-278 61-358 (942)
102 KOG0288 WD40 repeat protein Ti 100.0 4.7E-29 1E-33 196.8 18.9 247 13-272 209-458 (459)
103 KOG0641 WD40 repeat protein [G 100.0 5.8E-27 1.3E-31 171.6 28.0 256 12-275 78-349 (350)
104 KOG4283 Transcription-coupled 100.0 8.4E-28 1.8E-32 182.3 24.2 292 20-318 40-364 (397)
105 KOG2055 WD40 repeat protein [G 100.0 6.9E-28 1.5E-32 192.8 24.7 285 23-319 213-512 (514)
106 KOG0640 mRNA cleavage stimulat 100.0 1.5E-28 3.2E-33 187.7 19.6 249 67-318 106-382 (430)
107 KOG0264 Nucleosome remodeling 100.0 2.5E-28 5.5E-33 195.0 21.7 246 71-319 122-404 (422)
108 KOG0299 U3 snoRNP-associated p 100.0 4.8E-28 1E-32 193.6 22.5 247 66-320 135-411 (479)
109 KOG1274 WD40 repeat protein [G 100.0 4.9E-27 1.1E-31 202.3 29.6 270 20-303 10-286 (933)
110 KOG0267 Microtubule severing p 100.0 5.1E-30 1.1E-34 215.3 11.1 237 67-307 22-258 (825)
111 KOG0308 Conserved WD40 repeat- 100.0 1.1E-28 2.3E-33 205.1 17.8 236 78-318 29-284 (735)
112 TIGR03866 PQQ_ABC_repeats PQQ- 100.0 8.9E-26 1.9E-30 186.4 35.3 270 35-320 1-280 (300)
113 KOG1539 WD repeat protein [Gen 100.0 6.2E-27 1.3E-31 199.7 28.7 298 13-317 234-646 (910)
114 KOG1036 Mitotic spindle checkp 100.0 5.5E-27 1.2E-31 178.8 25.2 238 73-320 13-263 (323)
115 KOG1332 Vesicle coat complex C 100.0 8.1E-28 1.7E-32 177.7 17.2 248 70-319 8-286 (299)
116 KOG2048 WD40 repeat protein [G 100.0 7.8E-26 1.7E-30 189.0 29.4 276 19-308 21-310 (691)
117 KOG0646 WD40 repeat protein [G 100.0 7.4E-27 1.6E-31 187.2 22.4 229 73-304 81-336 (476)
118 KOG0300 WD40 repeat-containing 100.0 4E-27 8.7E-32 180.6 19.2 272 2-277 167-478 (481)
119 KOG0268 Sof1-like rRNA process 100.0 4.2E-28 9.1E-33 188.6 13.8 241 66-319 59-302 (433)
120 KOG0321 WD40 repeat-containing 100.0 7.7E-27 1.7E-31 193.7 22.1 288 28-320 54-392 (720)
121 KOG1332 Vesicle coat complex C 100.0 3.4E-27 7.3E-32 174.4 17.3 250 18-275 6-286 (299)
122 KOG0301 Phospholipase A2-activ 100.0 2.6E-26 5.7E-31 192.3 24.2 236 17-275 51-288 (745)
123 KOG4328 WD40 protein [Function 100.0 4.1E-26 8.9E-31 182.6 24.2 298 17-320 180-496 (498)
124 KOG0772 Uncharacterized conser 100.0 6.8E-27 1.5E-31 189.7 18.9 251 67-318 161-444 (641)
125 KOG0269 WD40 repeat-containing 100.0 6.8E-27 1.5E-31 198.0 19.4 297 8-313 26-334 (839)
126 KOG1063 RNA polymerase II elon 100.0 1E-25 2.2E-30 188.7 26.0 304 12-320 180-649 (764)
127 KOG1539 WD repeat protein [Gen 100.0 1.9E-25 4.1E-30 190.8 27.7 298 7-318 186-605 (910)
128 KOG0639 Transducin-like enhanc 100.0 6E-27 1.3E-31 189.6 17.4 238 24-274 466-703 (705)
129 KOG0269 WD40 repeat-containing 99.9 4.5E-27 9.8E-32 199.0 16.0 243 25-274 89-339 (839)
130 KOG2048 WD40 repeat protein [G 99.9 7.4E-25 1.6E-29 183.2 27.6 242 73-318 25-274 (691)
131 KOG2445 Nuclear pore complex c 99.9 1.5E-24 3.3E-29 165.5 27.0 246 70-318 10-317 (361)
132 KOG1009 Chromatin assembly com 99.9 3.6E-25 7.7E-30 174.8 23.5 304 12-319 3-372 (434)
133 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1.7E-23 3.7E-28 172.7 34.3 266 15-297 23-300 (300)
134 KOG0646 WD40 repeat protein [G 99.9 7.9E-25 1.7E-29 175.6 22.7 228 86-319 51-307 (476)
135 KOG1408 WD40 repeat protein [F 99.9 1.3E-24 2.8E-29 183.1 24.8 286 26-318 327-670 (1080)
136 KOG2919 Guanine nucleotide-bin 99.9 1.4E-24 3.1E-29 166.8 22.9 278 26-306 52-359 (406)
137 KOG0267 Microtubule severing p 99.9 6.2E-27 1.4E-31 196.9 10.9 239 17-267 22-260 (825)
138 KOG2106 Uncharacterized conser 99.9 2.6E-23 5.6E-28 168.7 30.7 299 13-319 277-626 (626)
139 KOG1274 WD40 repeat protein [G 99.9 2.5E-24 5.5E-29 185.7 26.2 244 70-319 10-262 (933)
140 KOG4378 Nuclear protein COP1 [ 99.9 9.7E-25 2.1E-29 176.6 21.1 265 25-299 36-305 (673)
141 KOG1063 RNA polymerase II elon 99.9 2E-24 4.4E-29 181.0 22.9 299 15-319 353-763 (764)
142 KOG2106 Uncharacterized conser 99.9 8.7E-23 1.9E-27 165.7 31.1 278 22-317 199-519 (626)
143 KOG0650 WD40 repeat nucleolar 99.9 1.5E-24 3.2E-29 179.1 21.3 287 14-317 391-733 (733)
144 KOG2445 Nuclear pore complex c 99.9 1.8E-23 3.9E-28 159.7 25.2 248 20-276 10-319 (361)
145 KOG1273 WD40 repeat protein [G 99.9 2.5E-24 5.4E-29 165.0 20.5 237 76-318 26-279 (405)
146 KOG2055 WD40 repeat protein [G 99.9 3.3E-24 7.1E-29 172.0 20.5 239 73-315 213-463 (514)
147 KOG0270 WD40 repeat-containing 99.9 2.3E-24 5E-29 172.0 18.3 243 34-279 191-453 (463)
148 KOG0302 Ribosome Assembly prot 99.9 6.6E-24 1.4E-28 166.2 19.9 218 12-231 140-379 (440)
149 KOG0302 Ribosome Assembly prot 99.9 2.9E-23 6.3E-28 162.7 20.5 242 70-316 148-435 (440)
150 KOG1034 Transcriptional repres 99.9 8.3E-23 1.8E-27 157.5 22.6 297 11-318 25-382 (385)
151 KOG0270 WD40 repeat-containing 99.9 1.5E-23 3.2E-28 167.4 18.7 230 84-319 191-449 (463)
152 KOG1538 Uncharacterized conser 99.9 6.8E-23 1.5E-27 171.7 23.4 273 25-318 14-292 (1081)
153 KOG0307 Vesicle coat complex C 99.9 3.1E-24 6.8E-29 189.3 14.6 251 24-278 65-330 (1049)
154 KOG0642 Cell-cycle nuclear pro 99.9 6.5E-24 1.4E-28 174.2 14.9 271 13-287 284-573 (577)
155 KOG0303 Actin-binding protein 99.9 4.2E-22 9.2E-27 157.1 24.3 230 68-300 76-322 (472)
156 KOG1445 Tumor-specific antigen 99.9 8.7E-23 1.9E-27 170.2 21.3 127 17-145 73-200 (1012)
157 KOG0307 Vesicle coat complex C 99.9 6.4E-24 1.4E-28 187.4 15.4 285 28-319 11-327 (1049)
158 KOG2096 WD40 repeat protein [G 99.9 4.8E-22 1E-26 152.8 22.9 245 66-319 79-360 (420)
159 KOG0642 Cell-cycle nuclear pro 99.9 1.1E-23 2.4E-28 172.9 14.8 288 29-319 234-561 (577)
160 KOG0649 WD40 repeat protein [G 99.9 3.2E-21 6.8E-26 143.1 25.6 270 24-304 11-302 (325)
161 KOG1334 WD40 repeat protein [G 99.9 2.2E-23 4.8E-28 168.4 14.7 296 14-318 133-465 (559)
162 COG2319 FOG: WD40 repeat [Gene 99.9 6.5E-20 1.4E-24 158.3 37.4 291 18-320 60-360 (466)
163 KOG4227 WD40 repeat protein [G 99.9 1.1E-21 2.4E-26 154.9 23.6 295 19-319 52-387 (609)
164 KOG0650 WD40 repeat nucleolar 99.9 2.1E-22 4.6E-27 166.6 20.2 241 67-316 394-677 (733)
165 COG2319 FOG: WD40 repeat [Gene 99.9 1.9E-19 4E-24 155.4 38.1 290 14-319 146-442 (466)
166 KOG0303 Actin-binding protein 99.9 1.8E-21 3.9E-26 153.6 20.2 213 19-233 77-297 (472)
167 KOG4283 Transcription-coupled 99.9 4.6E-21 9.9E-26 146.0 20.9 243 18-274 96-364 (397)
168 KOG4328 WD40 protein [Function 99.9 1.1E-21 2.5E-26 157.3 18.4 247 69-320 182-451 (498)
169 KOG4378 Nuclear protein COP1 [ 99.9 1.8E-21 4E-26 157.8 18.7 267 41-319 8-280 (673)
170 KOG0321 WD40 repeat-containing 99.9 3.7E-21 7.9E-26 160.3 19.5 253 17-277 94-393 (720)
171 KOG1538 Uncharacterized conser 99.9 2.9E-21 6.3E-26 162.1 18.9 242 14-275 44-293 (1081)
172 KOG0322 G-protein beta subunit 99.9 2.3E-21 5E-26 145.3 15.9 290 12-318 3-322 (323)
173 KOG1007 WD repeat protein TSSC 99.9 1.7E-20 3.8E-25 142.4 20.5 254 17-274 57-360 (370)
174 PRK11028 6-phosphogluconolacto 99.9 1.5E-18 3.3E-23 144.9 32.4 270 39-319 6-304 (330)
175 KOG1445 Tumor-specific antigen 99.9 1.1E-20 2.3E-25 157.9 18.7 260 34-298 590-870 (1012)
176 KOG1188 WD40 repeat protein [G 99.9 1.9E-20 4.1E-25 145.2 18.6 272 36-318 41-345 (376)
177 KOG1963 WD40 repeat protein [G 99.9 4.5E-19 9.8E-24 153.1 28.7 291 21-320 203-539 (792)
178 KOG1517 Guanine nucleotide bin 99.9 1.5E-19 3.3E-24 158.8 23.5 293 20-321 1061-1383(1387)
179 KOG1034 Transcriptional repres 99.9 1.8E-20 4E-25 144.6 15.2 244 21-275 87-383 (385)
180 KOG0644 Uncharacterized conser 99.9 4.8E-21 1E-25 164.3 11.8 279 17-318 184-467 (1113)
181 KOG2919 Guanine nucleotide-bin 99.9 6.3E-19 1.4E-23 136.0 22.0 239 76-320 52-328 (406)
182 KOG1009 Chromatin assembly com 99.8 4.3E-19 9.4E-24 140.7 20.4 262 14-279 56-376 (434)
183 KOG1240 Protein kinase contain 99.8 1.4E-18 3E-23 155.0 25.3 261 14-275 1039-1334(1431)
184 KOG1007 WD repeat protein TSSC 99.8 2E-18 4.4E-23 131.3 22.4 245 68-318 58-360 (370)
185 KOG1524 WD40 repeat-containing 99.8 3.8E-19 8.2E-24 145.9 18.4 187 16-227 97-283 (737)
186 KOG0644 Uncharacterized conser 99.8 5.7E-21 1.2E-25 163.8 7.3 241 66-319 183-426 (1113)
187 KOG1523 Actin-related protein 99.8 3.7E-18 8.1E-23 131.6 21.6 207 21-233 8-239 (361)
188 KOG0771 Prolactin regulatory e 99.8 1.5E-18 3.2E-23 138.4 19.7 189 119-309 148-346 (398)
189 PRK01742 tolB translocation pr 99.8 3.3E-18 7.2E-23 147.3 22.7 234 44-299 183-427 (429)
190 KOG0649 WD40 repeat protein [G 99.8 3.4E-17 7.3E-22 121.9 24.6 241 18-273 57-314 (325)
191 PRK11028 6-phosphogluconolacto 99.8 8.6E-17 1.9E-21 134.4 29.2 241 23-275 34-304 (330)
192 KOG0771 Prolactin regulatory e 99.8 1.3E-18 2.9E-23 138.7 15.6 195 27-230 148-354 (398)
193 KOG2110 Uncharacterized conser 99.8 2.3E-16 5E-21 124.0 26.8 235 74-320 6-249 (391)
194 KOG1963 WD40 repeat protein [G 99.8 8.9E-17 1.9E-21 139.2 26.3 300 16-319 50-438 (792)
195 KOG1587 Cytoplasmic dynein int 99.8 9.2E-17 2E-21 138.2 25.7 263 45-319 222-516 (555)
196 KOG0290 Conserved WD40 repeat- 99.8 2.6E-17 5.7E-22 125.4 18.9 242 75-320 46-319 (364)
197 KOG1524 WD40 repeat-containing 99.8 2.4E-17 5.2E-22 135.5 19.7 269 20-313 11-280 (737)
198 KOG1310 WD40 repeat protein [G 99.8 2.2E-18 4.8E-23 141.8 13.4 211 14-232 41-305 (758)
199 KOG1517 Guanine nucleotide bin 99.8 7.5E-17 1.6E-21 142.2 23.3 244 75-321 1066-1335(1387)
200 KOG0290 Conserved WD40 repeat- 99.8 1.6E-17 3.6E-22 126.5 16.0 205 21-231 94-319 (364)
201 KOG1587 Cytoplasmic dynein int 99.8 1.7E-16 3.8E-21 136.5 23.7 247 23-276 242-517 (555)
202 KOG1272 WD40-repeat-containing 99.8 1.2E-18 2.6E-23 140.5 9.8 264 25-307 131-399 (545)
203 PF02239 Cytochrom_D1: Cytochr 99.8 1.5E-14 3.2E-19 121.1 32.7 275 36-319 6-347 (369)
204 KOG4227 WD40 repeat protein [G 99.8 1.4E-16 3.1E-21 126.3 19.1 248 66-318 49-321 (609)
205 KOG1310 WD40 repeat protein [G 99.8 2.7E-17 5.9E-22 135.5 15.2 216 65-280 42-308 (758)
206 PRK01742 tolB translocation pr 99.8 1.6E-16 3.4E-21 136.9 20.7 210 17-243 197-416 (429)
207 KOG1523 Actin-related protein 99.8 3.9E-16 8.3E-21 120.6 19.5 232 73-308 10-269 (361)
208 KOG2139 WD40 repeat protein [G 99.8 1.2E-15 2.5E-20 119.9 22.4 186 23-219 98-299 (445)
209 PRK03629 tolB translocation pr 99.7 5.4E-15 1.2E-19 127.2 28.5 220 69-298 194-428 (429)
210 KOG2110 Uncharacterized conser 99.7 1.6E-14 3.5E-19 113.8 27.5 237 23-276 5-249 (391)
211 KOG1188 WD40 repeat protein [G 99.7 1.2E-16 2.7E-21 124.3 15.6 192 86-280 41-247 (376)
212 KOG1272 WD40-repeat-containing 99.7 1.2E-17 2.7E-22 134.7 10.0 232 74-318 130-361 (545)
213 KOG3881 Uncharacterized conser 99.7 2.2E-15 4.7E-20 119.4 22.2 268 23-299 55-343 (412)
214 KOG4497 Uncharacterized conser 99.7 2.2E-15 4.8E-20 117.0 21.6 275 29-319 14-391 (447)
215 KOG1354 Serine/threonine prote 99.7 3.2E-15 6.9E-20 116.8 21.3 286 23-317 25-432 (433)
216 KOG2111 Uncharacterized conser 99.7 1.7E-14 3.7E-19 111.5 24.9 233 76-319 8-256 (346)
217 KOG2321 WD40 repeat protein [G 99.7 1.2E-14 2.6E-19 120.7 22.6 270 21-306 49-332 (703)
218 PRK02889 tolB translocation pr 99.7 2.3E-14 5E-19 123.4 25.6 220 69-298 191-425 (427)
219 KOG1240 Protein kinase contain 99.7 2.1E-14 4.6E-19 128.8 25.2 253 65-319 1040-1334(1431)
220 PRK04922 tolB translocation pr 99.7 1.7E-14 3.6E-19 124.7 24.1 220 68-297 198-432 (433)
221 PRK03629 tolB translocation pr 99.7 3.3E-14 7.1E-19 122.4 25.5 209 19-242 194-417 (429)
222 KOG2139 WD40 repeat protein [G 99.7 1E-13 2.2E-18 109.2 25.0 252 22-275 139-431 (445)
223 KOG3881 Uncharacterized conser 99.7 1.5E-14 3.2E-19 114.8 20.3 240 73-320 55-321 (412)
224 PF08662 eIF2A: Eukaryotic tra 99.7 2.2E-14 4.9E-19 109.3 20.7 154 77-237 9-185 (194)
225 PRK05137 tolB translocation pr 99.7 2.1E-13 4.6E-18 118.0 28.9 221 67-298 195-433 (435)
226 KOG2394 WD40 protein DMR-N9 [G 99.7 2.5E-15 5.4E-20 123.7 14.8 144 23-166 219-383 (636)
227 KOG0322 G-protein beta subunit 99.7 3.2E-15 7E-20 112.6 13.4 239 21-274 54-322 (323)
228 PF08662 eIF2A: Eukaryotic tra 99.7 5.9E-14 1.3E-18 107.0 20.2 149 28-188 10-180 (194)
229 PRK02889 tolB translocation pr 99.6 7.9E-14 1.7E-18 120.1 22.9 206 18-238 190-410 (427)
230 PRK05137 tolB translocation pr 99.6 6.1E-13 1.3E-17 115.2 28.3 215 95-319 182-412 (435)
231 KOG1334 WD40 repeat protein [G 99.6 4.1E-15 8.9E-20 121.1 13.7 252 67-320 136-425 (559)
232 PRK04922 tolB translocation pr 99.6 1.5E-13 3.2E-18 118.8 24.4 200 18-231 198-412 (433)
233 KOG2394 WD40 protein DMR-N9 [G 99.6 1.3E-13 2.8E-18 113.8 21.9 197 83-297 183-384 (636)
234 PF10282 Lactonase: Lactonase, 99.6 1.6E-11 3.5E-16 102.9 34.5 243 75-319 38-322 (345)
235 KOG2111 Uncharacterized conser 99.6 6.9E-12 1.5E-16 97.4 27.9 235 26-276 8-257 (346)
236 COG2706 3-carboxymuconate cycl 99.6 4.7E-11 1E-15 94.7 31.9 271 44-321 15-323 (346)
237 KOG4497 Uncharacterized conser 99.6 3.1E-13 6.7E-18 105.3 18.5 266 19-308 87-423 (447)
238 TIGR02800 propeller_TolB tol-p 99.6 6E-12 1.3E-16 108.9 28.0 219 67-295 183-416 (417)
239 PRK00178 tolB translocation pr 99.6 6.8E-12 1.5E-16 108.8 28.1 221 68-298 193-428 (430)
240 PF10282 Lactonase: Lactonase, 99.6 1.9E-10 4.1E-15 96.5 33.8 250 24-280 37-329 (345)
241 PRK04792 tolB translocation pr 99.6 1.1E-11 2.4E-16 107.3 26.8 220 69-298 213-447 (448)
242 TIGR02800 propeller_TolB tol-p 99.5 5.9E-12 1.3E-16 108.9 24.9 197 18-228 184-395 (417)
243 KOG4547 WD40 repeat-containing 99.5 3.4E-12 7.3E-17 106.7 21.3 191 125-321 3-222 (541)
244 KOG0974 WD-repeat protein WDR6 99.5 4.6E-13 9.9E-18 118.6 16.9 192 29-231 93-289 (967)
245 PRK00178 tolB translocation pr 99.5 1.7E-11 3.6E-16 106.4 26.2 198 19-230 194-406 (430)
246 KOG1409 Uncharacterized conser 99.5 1.2E-12 2.6E-17 102.6 16.8 213 14-232 15-272 (404)
247 KOG2041 WD40 repeat protein [G 99.5 1.5E-11 3.2E-16 105.5 23.3 288 23-319 14-337 (1189)
248 PRK01029 tolB translocation pr 99.5 2.3E-11 5E-16 104.5 25.0 208 19-237 180-410 (428)
249 PRK04792 tolB translocation pr 99.5 2.5E-11 5.4E-16 105.1 24.5 205 20-239 214-433 (448)
250 KOG2321 WD40 repeat protein [G 99.5 5.6E-12 1.2E-16 105.2 18.9 247 14-276 83-344 (703)
251 PF02239 Cytochrom_D1: Cytochr 99.5 5.1E-11 1.1E-15 99.9 24.4 189 128-320 6-203 (369)
252 PRK01029 tolB translocation pr 99.5 1.6E-10 3.6E-15 99.3 26.0 223 70-299 181-426 (428)
253 KOG4190 Uncharacterized conser 99.4 1.3E-12 2.7E-17 108.9 11.8 287 16-315 728-1032(1034)
254 KOG2315 Predicted translation 99.4 1.4E-10 3E-15 96.8 23.4 274 23-319 34-390 (566)
255 KOG0974 WD-repeat protein WDR6 99.4 8.6E-12 1.9E-16 110.7 17.3 192 79-276 93-289 (967)
256 KOG2314 Translation initiation 99.4 1.2E-10 2.6E-15 97.1 22.8 263 27-307 214-557 (698)
257 KOG0280 Uncharacterized conser 99.4 8.2E-11 1.8E-15 90.6 20.2 265 44-317 45-331 (339)
258 KOG4547 WD40 repeat-containing 99.4 6.1E-10 1.3E-14 93.5 26.0 191 83-276 3-221 (541)
259 KOG1064 RAVE (regulator of V-A 99.4 1E-12 2.2E-17 122.4 10.4 195 74-284 2209-2407(2439)
260 TIGR02658 TTQ_MADH_Hv methylam 99.4 9.9E-09 2.2E-13 84.5 32.6 232 81-320 53-331 (352)
261 COG2706 3-carboxymuconate cycl 99.4 8.8E-09 1.9E-13 82.0 30.4 251 21-276 37-322 (346)
262 KOG4190 Uncharacterized conser 99.4 1.8E-12 3.8E-17 108.0 8.9 213 66-284 728-957 (1034)
263 COG4946 Uncharacterized protei 99.4 3.6E-09 7.9E-14 87.0 27.1 173 31-217 327-505 (668)
264 KOG0309 Conserved WD40 repeat- 99.4 1.5E-11 3.3E-16 105.6 13.8 286 23-319 24-339 (1081)
265 KOG1064 RAVE (regulator of V-A 99.4 5.1E-12 1.1E-16 117.8 11.7 199 20-240 2205-2408(2439)
266 PF04762 IKI3: IKI3 family; I 99.4 8.4E-09 1.8E-13 96.0 32.4 284 23-318 75-455 (928)
267 TIGR02658 TTQ_MADH_Hv methylam 99.4 1.5E-08 3.2E-13 83.5 30.2 243 31-284 53-339 (352)
268 PLN02919 haloacid dehalogenase 99.4 5.4E-09 1.2E-13 99.0 31.2 240 77-320 571-889 (1057)
269 TIGR03300 assembly_YfgL outer 99.3 7.4E-09 1.6E-13 88.4 28.8 261 34-319 64-338 (377)
270 KOG1354 Serine/threonine prote 99.3 1.7E-10 3.8E-15 90.7 16.7 241 74-318 26-358 (433)
271 TIGR03300 assembly_YfgL outer 99.3 4.3E-09 9.3E-14 89.8 27.1 258 34-316 104-376 (377)
272 PF04762 IKI3: IKI3 family; I 99.3 2E-08 4.4E-13 93.5 32.7 291 23-318 120-518 (928)
273 KOG0280 Uncharacterized conser 99.3 6.1E-10 1.3E-14 85.9 18.9 205 24-232 70-286 (339)
274 KOG1409 Uncharacterized conser 99.3 3E-10 6.6E-15 89.4 17.4 249 63-320 14-271 (404)
275 PLN02919 haloacid dehalogenase 99.3 8.6E-09 1.9E-13 97.7 30.4 250 27-279 571-892 (1057)
276 COG5354 Uncharacterized protei 99.3 4E-09 8.7E-14 87.3 23.7 265 24-306 72-418 (561)
277 KOG2041 WD40 repeat protein [G 99.3 5.7E-11 1.2E-15 102.0 13.0 234 74-310 15-281 (1189)
278 KOG2315 Predicted translation 99.3 5.6E-09 1.2E-13 87.4 22.2 248 27-298 129-411 (566)
279 PF08450 SGL: SMP-30/Gluconola 99.2 1.3E-07 2.8E-12 75.7 29.5 218 78-304 4-243 (246)
280 KOG3914 WD repeat protein WDR4 99.2 1.7E-10 3.8E-15 92.4 12.0 162 26-194 65-230 (390)
281 PRK04043 tolB translocation pr 99.2 4.6E-08 9.9E-13 83.8 26.7 190 25-230 189-400 (419)
282 COG5170 CDC55 Serine/threonine 99.2 4.9E-09 1.1E-13 81.8 18.2 215 22-241 25-321 (460)
283 PF13360 PQQ_2: PQQ-like domai 99.2 5.7E-08 1.2E-12 77.4 24.0 216 94-320 2-231 (238)
284 KOG3914 WD repeat protein WDR4 99.2 6.4E-10 1.4E-14 89.3 12.2 162 76-239 65-232 (390)
285 PRK04043 tolB translocation pr 99.2 1.1E-07 2.4E-12 81.5 26.1 192 75-277 189-402 (419)
286 PF07433 DUF1513: Protein of u 99.1 2.7E-07 5.9E-12 73.6 26.0 205 28-240 9-257 (305)
287 KOG1912 WD40 repeat protein [G 99.1 6.6E-08 1.4E-12 84.3 23.6 210 12-230 44-304 (1062)
288 KOG4714 Nucleoporin [Nuclear s 99.1 2.9E-09 6.2E-14 80.9 13.5 204 26-231 39-255 (319)
289 KOG2314 Translation initiation 99.1 3.8E-08 8.3E-13 82.5 20.9 235 77-319 214-478 (698)
290 KOG0309 Conserved WD40 repeat- 99.1 1.4E-09 2.9E-14 94.0 12.4 244 25-276 69-340 (1081)
291 KOG4532 WD40-like repeat conta 99.1 6.2E-08 1.3E-12 74.2 19.9 202 28-238 72-290 (344)
292 PF15492 Nbas_N: Neuroblastoma 99.1 4.1E-07 8.9E-12 70.6 24.5 240 29-287 3-271 (282)
293 KOG0882 Cyclophilin-related pe 99.1 5.5E-09 1.2E-13 85.3 14.7 253 21-282 7-312 (558)
294 COG5354 Uncharacterized protei 99.1 2.9E-07 6.2E-12 76.6 24.0 238 72-318 31-305 (561)
295 COG4946 Uncharacterized protei 99.1 2.2E-07 4.8E-12 76.8 23.1 149 84-237 331-484 (668)
296 PF15492 Nbas_N: Neuroblastoma 99.1 1.1E-06 2.3E-11 68.3 24.9 220 79-318 3-258 (282)
297 PF08450 SGL: SMP-30/Gluconola 99.1 2.3E-06 5.1E-11 68.4 28.4 198 28-241 4-223 (246)
298 KOG1832 HIV-1 Vpr-binding prot 99.0 2E-10 4.2E-15 101.0 4.8 219 65-303 1093-1317(1516)
299 KOG1912 WD40 repeat protein [G 99.0 1.3E-07 2.8E-12 82.6 20.9 239 26-276 18-305 (1062)
300 KOG1645 RING-finger-containing 99.0 9.6E-08 2.1E-12 77.2 18.4 291 22-319 134-461 (463)
301 KOG4532 WD40-like repeat conta 99.0 3.7E-07 7.9E-12 70.1 20.1 217 86-307 85-322 (344)
302 PRK11138 outer membrane biogen 99.0 1.2E-06 2.7E-11 75.1 26.2 259 35-317 120-392 (394)
303 PF07433 DUF1513: Protein of u 99.0 5.8E-06 1.3E-10 66.2 27.1 224 77-306 8-275 (305)
304 KOG4714 Nucleoporin [Nuclear s 99.0 9E-09 1.9E-13 78.3 10.7 160 22-188 88-255 (319)
305 KOG2695 WD40 repeat protein [G 99.0 3.4E-09 7.4E-14 83.7 8.7 161 131-296 228-401 (425)
306 KOG1275 PAB-dependent poly(A) 99.0 2.5E-08 5.5E-13 88.3 14.7 149 75-228 179-340 (1118)
307 PF13360 PQQ_2: PQQ-like domai 98.9 9.5E-07 2.1E-11 70.3 21.6 190 84-282 35-237 (238)
308 PF00400 WD40: WD domain, G-be 98.9 4.8E-09 1E-13 57.5 5.6 38 14-51 2-39 (39)
309 KOG0882 Cyclophilin-related pe 98.9 6E-08 1.3E-12 79.4 13.8 229 2-238 27-313 (558)
310 PRK11138 outer membrane biogen 98.9 3.7E-06 8.1E-11 72.2 25.6 239 34-283 68-320 (394)
311 PF00400 WD40: WD domain, G-be 98.9 7.7E-09 1.7E-13 56.7 5.8 39 277-317 1-39 (39)
312 KOG2114 Vacuolar assembly/sort 98.8 2.2E-06 4.7E-11 76.0 22.2 201 29-239 29-252 (933)
313 KOG2066 Vacuolar assembly/sort 98.8 8.4E-07 1.8E-11 77.9 19.3 186 74-276 40-234 (846)
314 COG5170 CDC55 Serine/threonine 98.8 9.1E-08 2E-12 74.9 12.0 202 115-320 26-310 (460)
315 KOG2695 WD40 repeat protein [G 98.8 2.1E-08 4.5E-13 79.3 8.6 149 89-240 228-386 (425)
316 KOG1832 HIV-1 Vpr-binding prot 98.8 3.5E-09 7.6E-14 93.4 4.0 195 107-319 1093-1291(1516)
317 KOG1275 PAB-dependent poly(A) 98.7 5.1E-07 1.1E-11 80.3 15.2 181 85-273 147-340 (1118)
318 KOG1645 RING-finger-containing 98.7 2.8E-06 6E-11 69.0 15.8 244 17-275 187-461 (463)
319 KOG2114 Vacuolar assembly/sort 98.6 1.4E-05 3E-10 71.2 20.7 205 80-289 30-258 (933)
320 PF08596 Lgl_C: Lethal giant l 98.6 9.1E-05 2E-09 62.9 25.0 240 75-317 3-336 (395)
321 KOG1920 IkappaB kinase complex 98.6 4.1E-05 9E-10 70.7 24.1 198 24-232 69-324 (1265)
322 KOG1920 IkappaB kinase complex 98.6 3.4E-05 7.3E-10 71.3 23.0 234 74-320 69-323 (1265)
323 PF00930 DPPIV_N: Dipeptidyl p 98.6 5.2E-05 1.1E-09 64.1 21.8 264 32-307 1-347 (353)
324 KOG3621 WD40 repeat-containing 98.5 0.00019 4.2E-09 62.8 24.0 138 22-166 32-179 (726)
325 PF11768 DUF3312: Protein of u 98.5 3.4E-06 7.4E-11 72.0 13.1 114 76-191 208-333 (545)
326 KOG2066 Vacuolar assembly/sort 98.5 1E-05 2.3E-10 71.3 16.1 180 116-319 40-233 (846)
327 PF08596 Lgl_C: Lethal giant l 98.4 0.00018 3.9E-09 61.1 21.8 215 25-241 3-301 (395)
328 COG3391 Uncharacterized conser 98.4 0.00084 1.8E-08 57.3 29.5 218 76-298 76-309 (381)
329 KOG1008 Uncharacterized conser 98.4 1.1E-07 2.4E-12 81.4 2.1 200 23-230 56-275 (783)
330 KOG3617 WD40 and TPR repeat-co 98.4 3.3E-06 7.3E-11 74.9 10.8 108 78-187 20-131 (1416)
331 PF06977 SdiA-regulated: SdiA- 98.4 0.00056 1.2E-08 54.1 23.2 201 16-227 14-247 (248)
332 PF06433 Me-amine-dh_H: Methyl 98.4 0.00076 1.6E-08 55.0 24.0 249 29-286 41-331 (342)
333 PRK02888 nitrous-oxide reducta 98.4 0.00018 3.9E-09 63.4 20.6 213 80-305 199-449 (635)
334 PF06977 SdiA-regulated: SdiA- 98.4 0.00066 1.4E-08 53.7 23.2 193 111-305 17-239 (248)
335 PF00930 DPPIV_N: Dipeptidyl p 98.3 0.00065 1.4E-08 57.5 22.7 233 82-317 1-311 (353)
336 PF04053 Coatomer_WDAD: Coatom 98.3 0.00061 1.3E-08 58.8 22.1 219 22-275 31-262 (443)
337 KOG3617 WD40 and TPR repeat-co 98.3 0.00021 4.5E-09 64.1 18.8 108 28-145 20-131 (1416)
338 cd00216 PQQ_DH Dehydrogenases 98.3 0.0028 6E-08 56.1 28.6 223 86-319 111-424 (488)
339 cd00216 PQQ_DH Dehydrogenases 98.2 0.0029 6.4E-08 56.0 27.7 186 93-285 173-434 (488)
340 PF11768 DUF3312: Protein of u 98.2 8.8E-06 1.9E-10 69.6 9.3 74 72-147 258-331 (545)
341 PRK02888 nitrous-oxide reducta 98.2 0.0023 4.9E-08 56.7 23.2 222 84-320 140-405 (635)
342 PF06433 Me-amine-dh_H: Methyl 98.2 0.0025 5.4E-08 52.1 23.7 238 77-320 39-321 (342)
343 COG3391 Uncharacterized conser 98.2 0.0036 7.8E-08 53.5 25.6 225 75-306 32-271 (381)
344 PF04053 Coatomer_WDAD: Coatom 98.1 0.0002 4.3E-09 61.7 15.8 143 156-319 31-173 (443)
345 COG0823 TolB Periplasmic compo 98.1 0.0024 5.1E-08 55.0 22.0 161 74-238 193-366 (425)
346 KOG1008 Uncharacterized conser 98.1 7.6E-07 1.7E-11 76.4 0.9 164 19-187 98-275 (783)
347 KOG4649 PQQ (pyrrolo-quinoline 98.1 0.0024 5.1E-08 49.6 25.1 99 84-182 62-160 (354)
348 PF14583 Pectate_lyase22: Olig 98.1 0.004 8.6E-08 52.0 27.1 275 30-318 42-380 (386)
349 COG0823 TolB Periplasmic compo 98.1 0.00074 1.6E-08 58.0 18.2 189 109-305 186-387 (425)
350 KOG4649 PQQ (pyrrolo-quinoline 98.1 0.0031 6.7E-08 49.0 21.8 142 85-229 23-164 (354)
351 KOG3621 WD40 repeat-containing 98.0 0.00015 3.2E-09 63.4 13.1 115 74-188 34-155 (726)
352 KOG2444 WD40 repeat protein [G 98.0 1.3E-05 2.8E-10 60.5 5.0 144 172-320 33-178 (238)
353 KOG4640 Anaphase-promoting com 98.0 7.6E-05 1.6E-09 64.4 9.9 94 116-210 21-115 (665)
354 COG3490 Uncharacterized protei 97.9 0.0061 1.3E-07 48.1 19.4 187 80-273 120-346 (366)
355 PF00780 CNH: CNH domain; Int 97.9 0.0081 1.7E-07 48.9 26.8 228 33-286 5-266 (275)
356 PF02897 Peptidase_S9_N: Proly 97.9 0.012 2.7E-07 51.0 30.8 242 75-320 125-405 (414)
357 PF04841 Vps16_N: Vps16, N-ter 97.9 0.012 2.6E-07 50.7 24.2 240 24-292 81-331 (410)
358 PF14583 Pectate_lyase22: Olig 97.9 0.011 2.4E-07 49.4 22.4 224 80-308 42-303 (386)
359 PF02897 Peptidase_S9_N: Proly 97.8 0.017 3.6E-07 50.2 26.1 242 25-279 125-408 (414)
360 PRK13616 lipoprotein LpqB; Pro 97.8 0.0033 7.1E-08 56.5 18.1 148 24-185 350-523 (591)
361 COG3386 Gluconolactonase [Carb 97.8 0.013 2.8E-07 48.2 23.9 216 80-305 31-274 (307)
362 smart00320 WD40 WD40 repeats. 97.8 7.7E-05 1.7E-09 39.7 5.2 37 15-51 4-40 (40)
363 KOG1897 Damage-specific DNA bi 97.8 0.03 6.4E-07 51.8 27.2 280 23-315 583-894 (1096)
364 KOG4640 Anaphase-promoting com 97.8 0.00019 4.1E-09 62.1 9.3 94 73-167 20-115 (665)
365 PF08553 VID27: VID27 cytoplas 97.8 0.0015 3.2E-08 59.8 15.5 143 84-229 492-646 (794)
366 PF08553 VID27: VID27 cytoplas 97.8 0.00091 2E-08 61.2 14.1 135 176-318 501-646 (794)
367 PRK13616 lipoprotein LpqB; Pro 97.8 0.016 3.4E-07 52.3 21.7 147 74-228 350-523 (591)
368 KOG4441 Proteins containing BT 97.7 0.013 2.8E-07 52.7 20.7 227 84-319 284-546 (571)
369 smart00320 WD40 WD40 repeats. 97.7 0.00022 4.7E-09 37.8 6.0 38 148-185 3-40 (40)
370 COG3204 Uncharacterized protei 97.7 0.018 3.9E-07 45.9 18.9 193 17-217 79-300 (316)
371 PHA02713 hypothetical protein; 97.7 0.014 2.9E-07 52.7 19.8 212 96-319 273-533 (557)
372 PF14783 BBS2_Mid: Ciliary BBS 97.6 0.0047 1E-07 41.6 12.2 100 26-140 2-109 (111)
373 PF03178 CPSF_A: CPSF A subuni 97.6 0.021 4.5E-07 47.8 19.3 131 95-230 62-202 (321)
374 PF14655 RAB3GAP2_N: Rab3 GTPa 97.6 0.039 8.5E-07 47.2 24.6 81 203-283 310-406 (415)
375 KOG2079 Vacuolar assembly/sort 97.5 0.00087 1.9E-08 61.8 9.8 105 168-274 98-202 (1206)
376 PF14783 BBS2_Mid: Ciliary BBS 97.5 0.013 2.7E-07 39.6 14.5 91 128-225 16-109 (111)
377 KOG1897 Damage-specific DNA bi 97.4 0.1 2.2E-06 48.5 26.4 284 23-320 530-857 (1096)
378 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.4 0.087 1.9E-06 47.2 30.2 162 121-286 239-501 (527)
379 KOG2395 Protein involved in va 97.4 0.009 1.9E-07 51.2 13.6 143 83-229 343-499 (644)
380 COG3204 Uncharacterized protei 97.4 0.052 1.1E-06 43.3 19.7 192 112-304 82-300 (316)
381 PF00780 CNH: CNH domain; Int 97.3 0.068 1.5E-06 43.5 25.6 220 83-320 5-256 (275)
382 PHA02713 hypothetical protein; 97.3 0.031 6.7E-07 50.4 17.1 185 84-278 303-536 (557)
383 PF03178 CPSF_A: CPSF A subuni 97.3 0.084 1.8E-06 44.1 25.3 174 96-275 3-202 (321)
384 KOG4441 Proteins containing BT 97.3 0.12 2.6E-06 46.8 20.3 229 32-277 282-548 (571)
385 PF04841 Vps16_N: Vps16, N-ter 97.2 0.12 2.7E-06 44.6 27.1 194 29-239 34-255 (410)
386 KOG2395 Protein involved in va 97.2 0.0062 1.3E-07 52.2 10.7 137 168-306 344-490 (644)
387 COG3490 Uncharacterized protei 97.1 0.096 2.1E-06 41.7 20.2 199 78-282 72-317 (366)
388 TIGR03074 PQQ_membr_DH membran 97.1 0.27 5.9E-06 45.9 24.9 198 85-283 194-485 (764)
389 COG3386 Gluconolactonase [Carb 97.0 0.14 3E-06 42.3 23.7 200 29-242 30-254 (307)
390 PF12894 Apc4_WD40: Anaphase-p 97.0 0.003 6.6E-08 35.5 4.9 30 23-52 11-40 (47)
391 PF05096 Glu_cyclase_2: Glutam 97.0 0.14 3E-06 40.8 24.3 183 117-305 46-249 (264)
392 KOG2079 Vacuolar assembly/sort 96.9 0.0062 1.3E-07 56.5 8.9 100 84-185 98-201 (1206)
393 KOG2444 WD40 repeat protein [G 96.9 0.007 1.5E-07 46.2 7.6 104 35-145 70-177 (238)
394 KOG3630 Nuclear pore complex, 96.8 0.025 5.5E-07 53.0 12.1 188 28-217 46-260 (1405)
395 PHA03098 kelch-like protein; P 96.8 0.22 4.8E-06 44.9 18.1 187 126-320 294-512 (534)
396 PRK10115 protease 2; Provision 96.7 0.52 1.1E-05 43.9 29.7 111 74-186 127-254 (686)
397 PF12894 Apc4_WD40: Anaphase-p 96.7 0.0083 1.8E-07 33.7 5.2 29 74-102 12-40 (47)
398 KOG4499 Ca2+-binding protein R 96.7 0.081 1.8E-06 40.8 11.8 91 77-167 161-263 (310)
399 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.6 0.48 1E-05 42.6 22.9 193 85-280 69-338 (527)
400 PHA03098 kelch-like protein; P 96.6 0.35 7.6E-06 43.7 17.8 187 84-278 294-514 (534)
401 PF14870 PSII_BNR: Photosynthe 96.6 0.33 7.1E-06 39.9 20.7 152 72-227 143-301 (302)
402 PHA02790 Kelch-like protein; P 96.3 0.7 1.5E-05 41.1 19.0 183 84-277 271-472 (480)
403 PF05096 Glu_cyclase_2: Glutam 96.3 0.41 8.8E-06 38.2 22.7 159 76-239 47-212 (264)
404 PF05694 SBP56: 56kDa selenium 96.3 0.59 1.3E-05 40.0 19.0 195 34-232 86-344 (461)
405 COG1520 FOG: WD40-like repeat 96.2 0.65 1.4E-05 39.7 22.4 198 84-286 68-279 (370)
406 PHA02790 Kelch-like protein; P 96.2 0.83 1.8E-05 40.6 18.4 183 127-320 272-471 (480)
407 PF15390 DUF4613: Domain of un 96.2 0.44 9.5E-06 42.1 14.8 148 74-229 20-185 (671)
408 TIGR02604 Piru_Ver_Nterm putat 96.0 0.75 1.6E-05 39.3 15.9 145 24-176 14-202 (367)
409 TIGR03118 PEPCTERM_chp_1 conse 96.0 0.65 1.4E-05 37.7 24.4 221 76-297 25-307 (336)
410 KOG1916 Nuclear protein, conta 96.0 0.011 2.3E-07 54.1 4.6 170 19-192 128-328 (1283)
411 TIGR02604 Piru_Ver_Nterm putat 95.9 0.89 1.9E-05 38.8 15.8 142 159-305 15-201 (367)
412 KOG3630 Nuclear pore complex, 95.6 0.11 2.5E-06 49.0 9.6 149 25-174 102-260 (1405)
413 COG5167 VID27 Protein involved 95.5 0.67 1.4E-05 40.3 13.2 143 83-230 477-632 (776)
414 COG3823 Glutamine cyclotransfe 95.3 0.95 2.1E-05 34.5 14.0 174 127-305 56-247 (262)
415 COG4590 ABC-type uncharacteriz 95.3 0.53 1.2E-05 40.2 11.7 160 153-320 216-387 (733)
416 TIGR03074 PQQ_membr_DH membran 95.3 2.7 5.8E-05 39.6 24.3 153 85-238 260-485 (764)
417 PF12234 Rav1p_C: RAVE protein 95.2 1.2 2.6E-05 40.5 14.5 107 78-186 34-155 (631)
418 TIGR03118 PEPCTERM_chp_1 conse 95.2 1.4 3.1E-05 35.8 23.2 219 24-244 23-293 (336)
419 PF10647 Gmad1: Lipoprotein Lp 95.1 1.4 2.9E-05 35.5 19.8 144 25-179 25-187 (253)
420 PF10168 Nup88: Nuclear pore c 95.1 2.9 6.3E-05 39.1 19.2 83 23-106 84-182 (717)
421 PF10313 DUF2415: Uncharacteri 95.0 0.16 3.5E-06 27.7 5.4 32 158-189 1-35 (43)
422 PF10647 Gmad1: Lipoprotein Lp 94.9 1.6 3.4E-05 35.1 18.9 145 75-222 25-187 (253)
423 PF12234 Rav1p_C: RAVE protein 94.9 2.9 6.3E-05 38.1 16.4 71 159-229 31-103 (631)
424 KOG4499 Ca2+-binding protein R 94.9 1.4 3E-05 34.4 18.7 211 86-306 28-274 (310)
425 PRK10115 protease 2; Provision 94.4 4.3 9.4E-05 38.0 30.4 195 24-230 127-346 (686)
426 PF10168 Nup88: Nuclear pore c 94.4 4.4 9.5E-05 37.9 21.8 73 74-147 85-181 (717)
427 PF14655 RAB3GAP2_N: Rab3 GTPa 94.4 1.1 2.3E-05 38.7 11.8 82 158-239 308-407 (415)
428 PF10313 DUF2415: Uncharacteri 94.4 0.21 4.6E-06 27.2 4.9 30 117-146 2-34 (43)
429 PF07569 Hira: TUP1-like enhan 94.2 0.44 9.5E-06 37.3 8.5 62 255-319 20-95 (219)
430 PF07995 GSDH: Glucose / Sorbo 94.2 3 6.4E-05 35.1 21.1 108 25-136 3-134 (331)
431 PF15390 DUF4613: Domain of un 94.2 1.3 2.8E-05 39.3 11.7 119 22-144 55-185 (671)
432 PF14870 PSII_BNR: Photosynthe 94.2 2.7 5.9E-05 34.6 27.3 277 23-316 16-301 (302)
433 TIGR03548 mutarot_permut cycli 94.1 3.1 6.7E-05 34.8 22.2 108 126-234 72-198 (323)
434 PF08728 CRT10: CRT10; InterP 93.5 6.3 0.00014 36.5 16.3 150 35-186 49-245 (717)
435 PF05694 SBP56: 56kDa selenium 93.5 4.6 9.9E-05 34.9 20.8 192 127-319 87-342 (461)
436 COG4257 Vgb Streptogramin lyas 93.4 3.4 7.3E-05 33.2 21.2 197 74-275 62-262 (353)
437 KOG1916 Nuclear protein, conta 93.1 0.23 5.1E-06 45.9 5.8 130 95-228 111-263 (1283)
438 PF07569 Hira: TUP1-like enhan 93.0 1.3 2.7E-05 34.7 9.2 67 165-232 18-97 (219)
439 KOG2247 WD40 repeat-containing 93.0 0.015 3.2E-07 49.6 -1.6 147 21-180 32-181 (615)
440 PLN02193 nitrile-specifier pro 92.9 6.5 0.00014 35.0 20.9 149 127-278 229-413 (470)
441 PF13449 Phytase-like: Esteras 92.8 5.2 0.00011 33.6 17.4 112 22-134 18-165 (326)
442 PF14727 PHTB1_N: PTHB1 N-term 92.8 6 0.00013 34.3 30.3 148 34-186 36-203 (418)
443 COG4590 ABC-type uncharacteriz 92.7 0.92 2E-05 38.9 8.3 159 72-234 219-390 (733)
444 PF07250 Glyoxal_oxid_N: Glyox 91.9 3.8 8.3E-05 32.6 10.5 139 98-239 49-206 (243)
445 PF07250 Glyoxal_oxid_N: Glyox 91.6 5.8 0.00013 31.5 12.2 144 140-285 49-207 (243)
446 COG5167 VID27 Protein involved 91.6 5.4 0.00012 35.0 11.6 135 168-306 478-622 (776)
447 PLN00033 photosystem II stabil 91.0 9.6 0.00021 33.0 17.6 154 73-227 238-396 (398)
448 PF14781 BBS2_N: Ciliary BBSom 90.7 4.5 9.8E-05 28.6 11.9 106 207-318 5-124 (136)
449 PF08728 CRT10: CRT10; InterP 90.7 1.3 2.9E-05 40.7 7.7 119 25-144 102-245 (717)
450 PLN02153 epithiospecifier prot 90.5 9.7 0.00021 32.1 24.1 63 84-148 32-112 (341)
451 PF12657 TFIIIC_delta: Transcr 90.3 3.7 8.1E-05 30.7 8.9 30 75-104 87-122 (173)
452 KOG2377 Uncharacterized conser 90.2 12 0.00025 32.6 18.2 152 78-232 27-187 (657)
453 TIGR03547 muta_rot_YjhT mutatr 90.0 11 0.00024 31.9 22.4 42 268-310 291-333 (346)
454 PF07995 GSDH: Glucose / Sorbo 89.8 11 0.00024 31.7 26.3 230 76-314 4-330 (331)
455 PRK14131 N-acetylneuraminic ac 89.7 12 0.00027 32.1 20.5 13 296-308 341-353 (376)
456 PF07676 PD40: WD40-like Beta 89.4 1.9 4.2E-05 22.8 5.0 28 73-100 8-38 (39)
457 PF11715 Nup160: Nucleoporin N 89.4 2.2 4.8E-05 38.7 8.3 79 33-111 156-256 (547)
458 TIGR03606 non_repeat_PQQ dehyd 89.2 15 0.00032 32.4 18.1 53 117-169 31-90 (454)
459 PRK13684 Ycf48-like protein; P 89.2 13 0.00027 31.4 29.7 156 157-320 172-332 (334)
460 KOG2377 Uncharacterized conser 89.1 14 0.00031 32.1 19.7 152 29-188 28-186 (657)
461 KOG4460 Nuclear pore complex, 88.9 10 0.00022 33.5 11.1 26 117-142 105-130 (741)
462 PF11715 Nup160: Nucleoporin N 88.4 4.2 9.1E-05 37.0 9.4 72 83-154 156-257 (547)
463 KOG1983 Tomosyn and related SN 88.4 13 0.00029 36.4 12.9 31 23-53 35-65 (993)
464 PF12657 TFIIIC_delta: Transcr 88.0 5.2 0.00011 30.0 8.3 30 158-187 86-121 (173)
465 PF14781 BBS2_N: Ciliary BBSom 88.0 7.6 0.00017 27.5 12.8 117 163-283 4-133 (136)
466 TIGR02276 beta_rpt_yvtn 40-res 87.9 2.8 6E-05 22.4 6.4 32 125-156 1-33 (42)
467 KOG2063 Vacuolar assembly/sort 87.6 28 0.0006 33.5 15.8 76 30-107 21-100 (877)
468 PF03088 Str_synth: Strictosid 87.5 2.7 5.9E-05 27.4 5.5 43 262-305 32-74 (89)
469 COG3823 Glutamine cyclotransfe 87.0 12 0.00026 28.8 13.3 152 84-239 55-213 (262)
470 TIGR03606 non_repeat_PQQ dehyd 87.0 21 0.00045 31.5 14.2 113 21-136 27-166 (454)
471 PF13449 Phytase-like: Esteras 87.0 17 0.00037 30.5 17.4 103 116-219 20-165 (326)
472 PF07676 PD40: WD40-like Beta 86.7 3.2 7E-05 21.9 5.4 32 285-316 6-38 (39)
473 KOG4460 Nuclear pore complex, 86.3 24 0.00051 31.4 13.4 27 75-101 105-131 (741)
474 PRK13684 Ycf48-like protein; P 86.2 19 0.00042 30.3 26.1 152 115-273 172-329 (334)
475 KOG2247 WD40 repeat-containing 85.6 0.12 2.7E-06 44.3 -1.8 145 76-224 37-182 (615)
476 TIGR03548 mutarot_permut cycli 85.3 21 0.00045 29.9 21.0 105 84-190 72-197 (323)
477 KOG2280 Vacuolar assembly/sort 84.6 34 0.00075 31.9 19.2 162 74-239 84-255 (829)
478 PF14761 HPS3_N: Hermansky-Pud 84.5 17 0.00037 28.2 15.8 100 86-188 29-164 (215)
479 smart00564 PQQ beta-propeller 84.3 3 6.6E-05 20.9 3.9 25 259-283 8-32 (33)
480 PLN02153 epithiospecifier prot 84.0 25 0.00054 29.7 22.4 24 84-107 85-113 (341)
481 KOG2280 Vacuolar assembly/sort 83.3 39 0.00085 31.5 16.5 50 137-188 64-113 (829)
482 PLN02193 nitrile-specifier pro 83.0 34 0.00074 30.5 19.6 138 168-308 228-387 (470)
483 KOG1900 Nuclear pore complex, 82.8 48 0.001 33.1 13.2 150 77-231 82-273 (1311)
484 TIGR02276 beta_rpt_yvtn 40-res 82.6 5.5 0.00012 21.2 6.0 30 256-285 2-32 (42)
485 PF12768 Rax2: Cortical protei 82.6 25 0.00055 28.8 12.1 94 94-188 15-124 (281)
486 PF14727 PHTB1_N: PTHB1 N-term 82.3 33 0.00072 29.9 17.8 143 169-317 37-202 (418)
487 PF02333 Phytase: Phytase; In 82.0 32 0.00069 29.5 20.7 187 125-320 66-291 (381)
488 COG5276 Uncharacterized conser 80.5 31 0.00066 28.3 25.6 190 28-231 91-286 (370)
489 PF10395 Utp8: Utp8 family; I 80.3 50 0.0011 30.7 22.5 243 28-283 32-313 (670)
490 PF03088 Str_synth: Strictosid 80.1 14 0.0003 24.2 7.6 41 92-133 34-74 (89)
491 PF01011 PQQ: PQQ enzyme repea 79.3 7.2 0.00016 20.5 4.2 26 260-285 3-28 (38)
492 PF14761 HPS3_N: Hermansky-Pud 79.0 17 0.00037 28.2 7.6 48 258-306 29-78 (215)
493 KOG3616 Selective LIM binding 78.7 6.6 0.00014 36.3 6.1 67 158-228 15-81 (1636)
494 PF05935 Arylsulfotrans: Aryls 78.2 51 0.0011 29.5 18.0 186 83-273 113-365 (477)
495 KOG1983 Tomosyn and related SN 78.0 76 0.0017 31.5 14.2 30 75-104 37-66 (993)
496 TIGR02171 Fb_sc_TIGR02171 Fibr 76.8 32 0.0007 33.0 10.0 81 137-217 329-415 (912)
497 PF14779 BBS1: Ciliary BBSome 74.5 34 0.00075 27.5 8.4 59 213-272 196-255 (257)
498 COG5276 Uncharacterized conser 74.2 48 0.001 27.3 21.9 147 33-188 136-286 (370)
499 KOG1896 mRNA cleavage and poly 73.7 1E+02 0.0022 30.8 13.4 145 36-186 1047-1212(1366)
500 TIGR02171 Fb_sc_TIGR02171 Fibr 73.3 39 0.00084 32.5 9.6 79 94-172 328-413 (912)
No 1
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.1e-54 Score=334.64 Aligned_cols=289 Identities=33% Similarity=0.650 Sum_probs=256.2
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
....+.||.++|.|++|+|+|..|++|+.|.++++||+.. ..|....++|..-|.+++|+|||+.||+|+.|
T Consensus 107 CssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~T--------eTp~~t~KgH~~WVlcvawsPDgk~iASG~~d 178 (480)
T KOG0271|consen 107 CSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDT--------ETPLFTCKGHKNWVLCVAWSPDGKKIASGSKD 178 (480)
T ss_pred eccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCC--------CCcceeecCCccEEEEEEECCCcchhhccccC
Confidence 4466899999999999999999999999999999998754 35678899999999999999999999999999
Q ss_pred CcEEEEecCCcce-eeeeecCcccEEEEEECC-----CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 95 KTIRLWDVPTATC-LKTLIGHTNYVFCVNFNP-----QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 95 ~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
|+|++||..++++ ...+.+|...|.+++|.| ..++|++++.||.+++||+..+.++..+.+|..+|+++.|--+
T Consensus 179 g~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~ 258 (480)
T KOG0271|consen 179 GSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE 258 (480)
T ss_pred CeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC
Confidence 9999999988865 457899999999999975 5678999999999999999999999999999999999999654
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeee-----------------------------------------------------
Q 020798 169 GTMIVTSSYDGLCRIWDASTGHCMKTL----------------------------------------------------- 195 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~~~~~~----------------------------------------------------- 195 (321)
| ++++++.|++|++|+...|.+.+.+
T Consensus 259 g-liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~e 337 (480)
T KOG0271|consen 259 G-LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGE 337 (480)
T ss_pred c-eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcc
Confidence 4 8899999999999987553321110
Q ss_pred -------------------------ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEe
Q 020798 196 -------------------------IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250 (321)
Q Consensus 196 -------------------------~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 250 (321)
...|..-|+.+.|+||++++++++.|..|++||.++|+.+.++.+|...+|.+..
T Consensus 338 rlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvaw 417 (480)
T KOG0271|consen 338 RLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAW 417 (480)
T ss_pred eeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEe
Confidence 0123344778999999999999999999999999999999999999998887654
Q ss_pred EEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
. .|.++|++|+.|.++++||+++.++...+.||.++|.++.|+|||..+++|+ .|+.++||.
T Consensus 418 s---aDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sgg--kdkv~~lw~ 479 (480)
T KOG0271|consen 418 S---ADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGG--KDKVLRLWR 479 (480)
T ss_pred c---cCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCC--CceEEEeec
Confidence 3 5789999999999999999999999999999999999999999999999998 558999996
No 2
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.9e-53 Score=332.82 Aligned_cols=297 Identities=32% Similarity=0.542 Sum_probs=268.9
Q ss_pred ccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC--C
Q 020798 8 ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD--S 85 (321)
Q Consensus 8 ~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~--~ 85 (321)
+...+-.+...--|-.++|..+.|++|++.|+||+.+|.+++|... ....++.+.+|...|.++.|+|. +
T Consensus 160 k~~~~~~l~~SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~--------~~~~~~~l~gH~~~v~~~~fhP~~~~ 231 (459)
T KOG0272|consen 160 KHLQSLELVCSQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVP--------QCNLLQTLRGHTSRVGAAVFHPVDSD 231 (459)
T ss_pred HHhhhhhhhhhhccCCCcceeeEeecCCCeEEEeecCCceeEeecC--------CcceeEEEeccccceeeEEEccCCCc
Confidence 3333444444445778999999999999999999999999999653 33567889999999999999996 5
Q ss_pred CEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEE
Q 020798 86 RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 165 (321)
..+++|+.||++++|++.+.+++..+.+|...|..++|+|+|++|++++.|.+-++||++++.......+|...|.+++|
T Consensus 232 ~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf 311 (459)
T KOG0272|consen 232 LNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAF 311 (459)
T ss_pred cceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEe
Confidence 68999999999999999998889999999999999999999999999999999999999999888888999999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
+|||.++++|+.|..-+|||++++.++..+.. |...|..++|+|+|..|++|+.|++++|||++..+.+..+.+|.+.+
T Consensus 312 ~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlV 390 (459)
T KOG0272|consen 312 QPDGSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLV 390 (459)
T ss_pred cCCCceeeccCccchhheeecccCcEEEEecc-cccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchh
Confidence 99999999999999999999999999887654 77789999999999999999999999999999999999999998876
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
..+ .|.+..|.+|++++.|+++++|...+..+++.+.||.+.|.++.++|++..++++|.| ++||+|.
T Consensus 391 S~V--k~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~D--RT~KLW~ 458 (459)
T KOG0272|consen 391 SQV--KYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFD--RTIKLWR 458 (459)
T ss_pred hhe--EecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccC--ceeeecc
Confidence 554 3444579999999999999999999999999999999999999999999999999976 7999996
No 3
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=2.9e-48 Score=292.17 Aligned_cols=291 Identities=26% Similarity=0.494 Sum_probs=257.3
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
..+++|+||.+.|.++.|++|.++|+++|.||.+.+||....+ ....++-...-|..++|+|.|+++|+|+.
T Consensus 46 ~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~Ttn--------K~haipl~s~WVMtCA~sPSg~~VAcGGL 117 (343)
T KOG0286|consen 46 RTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTN--------KVHAIPLPSSWVMTCAYSPSGNFVACGGL 117 (343)
T ss_pred eeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEccccc--------ceeEEecCceeEEEEEECCCCCeEEecCc
Confidence 4568899999999999999999999999999999999865422 22333444567889999999999999999
Q ss_pred CCcEEEEecCCc------ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc
Q 020798 94 DKTIRLWDVPTA------TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167 (321)
Q Consensus 94 d~~i~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~ 167 (321)
|+...||++.+. +..+.+.+|.+++.|+.|-+ .+.|++++.|.++-+||+++++.+..+.+|.+.|.++++.|
T Consensus 118 dN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p 196 (343)
T KOG0286|consen 118 DNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSP 196 (343)
T ss_pred CceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCC
Confidence 999999999754 33456889999999999988 46789999999999999999999999999999999999999
Q ss_pred -CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCcee
Q 020798 168 -DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY 246 (321)
Q Consensus 168 -~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 246 (321)
+++.|++|+-|+..++||++.+.+.+.+. .++..|+.+.|.|+|.-+++|+.|++.++||++..+.+..|... ....
T Consensus 197 ~~~ntFvSg~cD~~aklWD~R~~~c~qtF~-ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~-~~~~ 274 (343)
T KOG0286|consen 197 SDGNTFVSGGCDKSAKLWDVRSGQCVQTFE-GHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHD-SIIC 274 (343)
T ss_pred CCCCeEEecccccceeeeeccCcceeEeec-ccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccC-cccC
Confidence 89999999999999999999998887764 56788999999999999999999999999999999999888743 3333
Q ss_pred EEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 247 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
.+....+...|++|.+|..|..+.|||.-.++.+..+.+|.++|.++..+|||.-+++||+| ..+|||.
T Consensus 275 gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWD--s~lriW~ 343 (343)
T KOG0286|consen 275 GITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWD--STLRIWA 343 (343)
T ss_pred CceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchh--HheeecC
Confidence 44555555789999999999999999999999999999999999999999999999999998 5899994
No 4
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=2.5e-45 Score=315.43 Aligned_cols=304 Identities=47% Similarity=0.865 Sum_probs=270.6
Q ss_pred CcceeeeeccCC-cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE
Q 020798 11 RPYTLTQTLNGH-LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV 89 (321)
Q Consensus 11 ~~~~~~~~~~~h-~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~ 89 (321)
..+.+.+.+.+| ...|.++.|+|+|+.+++++.++.+++|....... ..+..+.+|...|++++|+|++++++
T Consensus 146 ~~~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~------~~~~~l~~h~~~v~~~~fs~d~~~l~ 219 (456)
T KOG0266|consen 146 RVFSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS------NLLRELSGHTRGVSDVAFSPDGSYLL 219 (456)
T ss_pred ccceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc------hhhccccccccceeeeEECCCCcEEE
Confidence 334455666555 88999999999999999999999999998743321 23455689999999999999999999
Q ss_pred EEeCCCcEEEEec-CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 90 SASDDKTIRLWDV-PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 90 ~~~~d~~i~iwd~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
+++.|++|+|||+ ..+..++.+.+|...|++++|+|+++.+++|+.|++|++||++++++...+..|.+.|++++|+++
T Consensus 220 s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d 299 (456)
T KOG0266|consen 220 SGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPD 299 (456)
T ss_pred EecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCC
Confidence 9999999999999 555888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCc--eeeeeccCCCC-CeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 169 GTMIVTSSYDGLCRIWDASTGH--CMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
++.+++++.|+.|++||+.++. +...+...... ++..+.|+|++.+++++..|+.+++||+..++.+..+.+|....
T Consensus 300 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~ 379 (456)
T KOG0266|consen 300 GNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLV 379 (456)
T ss_pred CCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcc
Confidence 9999999999999999999988 44555444444 68999999999999999999999999999999999999988765
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCC-CCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH-TDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.|+......+.+.++++|+.|+.|++|+..++..+..+.+| ...+..++++|..+++++++.+.|+.|++|..+.
T Consensus 380 ~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~~ 455 (456)
T KOG0266|consen 380 RCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYDF 455 (456)
T ss_pred eeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCCC
Confidence 56655555678999999999999999999999989999999 8899999999999999999988899999998764
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.5e-46 Score=294.50 Aligned_cols=260 Identities=32% Similarity=0.561 Sum_probs=233.7
Q ss_pred CCccccccCCcc--eeeeeccCCcccEEEEEECCC--CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEE
Q 020798 2 SSDQSLESFRPY--TLTQTLNGHLRAISSVKFSHD--GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVS 77 (321)
Q Consensus 2 ~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~s~~--g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 77 (321)
|+++..+-+... .+.+.|.||...|.++.|+|. +..+|+|+.||++++|++.. ..+++.+.+|...|.
T Consensus 194 swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~--------e~~l~~l~gH~~RVs 265 (459)
T KOG0272|consen 194 SWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ--------ETPLQDLEGHLARVS 265 (459)
T ss_pred ecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCC--------Ccchhhhhcchhhhe
Confidence 344445444433 467889999999999999997 56899999999999997653 367899999999999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCC
Q 020798 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS 157 (321)
Q Consensus 78 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 157 (321)
.++|+|+|++|++++-|.+-++||+.++..+....||+..|++++|.|||..+++|+.|..-+|||+++++++..+.+|.
T Consensus 266 ~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~ 345 (459)
T KOG0272|consen 266 RVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHI 345 (459)
T ss_pred eeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccc
Confidence 99999999999999999999999999999888889999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEE
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILK 236 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~~~ 236 (321)
.+|.+++|+|+|-.+++|+.|++++|||++.-.++..+ ..|..-|+.+.|+| .|.+|++++.|++++||...+..+++
T Consensus 346 k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~i-pAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~k 424 (459)
T KOG0272|consen 346 KEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTI-PAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLK 424 (459)
T ss_pred cceeeEeECCCceEEeecCCCCcEEEeeecccccceec-ccccchhhheEecccCCeEEEEcccCcceeeecCCCcccch
Confidence 99999999999999999999999999999987765554 45667799999998 78999999999999999999999999
Q ss_pred EEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEE
Q 020798 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd 273 (321)
++.+|.+.+.++.. .++++++++++.|+++++|.
T Consensus 425 sLaGHe~kV~s~Di---s~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 425 SLAGHEGKVISLDI---SPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred hhcCCccceEEEEe---ccCCceEEEeccCceeeecc
Confidence 99999988665443 47899999999999999995
No 6
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.5e-45 Score=287.50 Aligned_cols=298 Identities=29% Similarity=0.497 Sum_probs=256.8
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
|.+-.+.+..|..+|..+.|||+|+|||+++.|.+..+|.+..- .......++.+|..+|.-+.||||.++|+++
T Consensus 213 p~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d-----~~~kl~~tlvgh~~~V~yi~wSPDdryLlaC 287 (519)
T KOG0293|consen 213 PSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYD-----VHFKLKKTLVGHSQPVSYIMWSPDDRYLLAC 287 (519)
T ss_pred CchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecC-----cceeeeeeeecccCceEEEEECCCCCeEEec
Confidence 55566788999999999999999999999999999999987532 1134567788999999999999999999999
Q ss_pred eCCCcEEEEecCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC-CCCCeeEEEEccCC
Q 020798 92 SDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA-HSDPVTAVDFNRDG 169 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~v~~~~~~~~~ 169 (321)
+.|..+.+||+.++.+...+. ++...+.+++|.|||..+++|+.|+.|..||+.... ...... ....|.+++..+||
T Consensus 288 g~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dg 366 (519)
T KOG0293|consen 288 GFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDG 366 (519)
T ss_pred CchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCC
Confidence 999999999999998655442 345778999999999999999999999999986443 333332 23568999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
+.+++.+.|..+++++..+......+ ....+++++.++.+++++++.-.+..+++||+...+.++.+.+|....+.+.
T Consensus 367 k~vl~v~~d~~i~l~~~e~~~dr~li--se~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIr 444 (519)
T KOG0293|consen 367 KYVLLVTVDKKIRLYNREARVDRGLI--SEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIR 444 (519)
T ss_pred cEEEEEecccceeeechhhhhhhccc--cccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEE
Confidence 99999999999999998765433222 3456799999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCC-ceEEEEeecCCccEEEcccc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE-NIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~~~d~~~~i~iw~~~ 319 (321)
++|-..+..++++|++|+.|+||+..+++++..+.||...|++|+|+|.. .++|+|| +||+|+||...
T Consensus 445 SCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASas--DDgtIRIWg~~ 513 (519)
T KOG0293|consen 445 SCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASAS--DDGTIRIWGPS 513 (519)
T ss_pred eccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccC--CCCeEEEecCC
Confidence 99988888999999999999999999999999999999999999999986 5688887 46999999875
No 7
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-43 Score=263.23 Aligned_cols=294 Identities=29% Similarity=0.522 Sum_probs=243.3
Q ss_pred eeeeccCCcccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 15 LTQTLNGHLRAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
+..+|++|.+.|+.++..+.+ +.+++++.|..+.+|++..- +.....+++.+++|+..|..+..+++|++.++++.
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~d---d~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSD---DIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccC---ccccCceeeeeeccceEecceEEccCCceEEeccc
Confidence 556789999999999999874 68899999999999998764 34455678899999999999999999999999999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC--CCCeeEEEEccC--C
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH--SDPVTAVDFNRD--G 169 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~--~~~v~~~~~~~~--~ 169 (321)
|+.+++||+.+++....+.+|...|.+++++||++++++|+.|.+|++|++... +..++..+ .+-|.++.|+|+ .
T Consensus 84 D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 84 DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESN 162 (315)
T ss_pred cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCC
Confidence 999999999999999999999999999999999999999999999999998744 44444433 678999999998 5
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
..+++++.|+++++||+++.+....+. .+...++.++++|||..+++|+.||.+.+||++.++.+..+... .. +.
T Consensus 163 p~Ivs~s~DktvKvWnl~~~~l~~~~~-gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~-~~---v~ 237 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRNCQLRTTFI-GHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAF-DI---VN 237 (315)
T ss_pred cEEEEccCCceEEEEccCCcchhhccc-cccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCC-Ce---Ee
Confidence 689999999999999999877555543 56677999999999999999999999999999999988777533 22 33
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC----C-----CCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG----H-----TDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----h-----~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.+.+.|+.-.|+ +..+-.|+|||+.++..+..++- . .-.-.+++|+++|..|.+|- .|+.|++|...+
T Consensus 238 sl~fspnrywL~-~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~--td~~irv~qv~~ 314 (315)
T KOG0279|consen 238 SLCFSPNRYWLC-AATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGY--TDNVIRVWQVAK 314 (315)
T ss_pred eEEecCCceeEe-eccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeee--cCCcEEEEEeec
Confidence 444446554444 44556699999999887665432 1 11236789999999999986 568999997643
No 8
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.5e-43 Score=259.19 Aligned_cols=292 Identities=30% Similarity=0.535 Sum_probs=259.4
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
|....+.+..|.++|.+++|+-||+|.++|+.|+++++|+. .....+.++.+|...|.+++.+.|...|++|
T Consensus 6 ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp--------~rg~liktYsghG~EVlD~~~s~Dnskf~s~ 77 (307)
T KOG0316|consen 6 PTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNP--------LRGALIKTYSGHGHEVLDAALSSDNSKFASC 77 (307)
T ss_pred cchhceeecccccceEEEEEccCCCEEEEcCCCceEEeecc--------cccceeeeecCCCceeeeccccccccccccC
Confidence 44456778999999999999999999999999999999953 3345678899999999999999999999999
Q ss_pred eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC--EEEEEEeCCCCCeeEEEEccCC
Q 020798 92 SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG--KCLKVLPAHSDPVTAVDFNRDG 169 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~--~~~~~~~~~~~~v~~~~~~~~~ 169 (321)
+.|..+.+||+.+++..+.+.+|.+.|+.+.|+.+...+++|+.|..+++||.++. ++++.+....+.|.++... +
T Consensus 78 GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~ 155 (307)
T KOG0316|consen 78 GGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--E 155 (307)
T ss_pred CCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--c
Confidence 99999999999999999999999999999999999999999999999999998754 5777777777889888875 4
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
..+++|+.||+++.||++.+...... ...+|+++.|+++++..++++.|+++++.|-.+|++++.+.+|.+..+.+.
T Consensus 156 heIvaGS~DGtvRtydiR~G~l~sDy---~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykld 232 (307)
T KOG0316|consen 156 HEIVAGSVDGTVRTYDIRKGTLSSDY---FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLD 232 (307)
T ss_pred cEEEeeccCCcEEEEEeecceeehhh---cCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeee
Confidence 57899999999999999998765443 356799999999999999999999999999999999999999999999888
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCC-eEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDP-VISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+++. .....+++|++||.|++||+....++.++..|... |.+++++|...-|.++. +..+.+|..+.
T Consensus 233 c~l~-qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~---~~~~~~~~~~~ 300 (307)
T KOG0316|consen 233 CCLN-QSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITAT---GHGDLFWYQEN 300 (307)
T ss_pred eeec-ccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEec---CCceeceeehh
Confidence 7776 45678999999999999999999999999988877 89999999988777764 35688887653
No 9
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.4e-44 Score=278.87 Aligned_cols=251 Identities=33% Similarity=0.620 Sum_probs=217.1
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
...+.+|...|.++.|+|+|+.|++|+.|.++++||+.+.++....++|...|.|++|+|||+.|++|+.||.|++||.+
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpk 187 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPK 187 (480)
T ss_pred ccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEE-EEEeCCCCCeeEEEEcc-----CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 146 TGKCL-KVLPAHSDPVTAVDFNR-----DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 146 ~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
+++++ ..+..|...|++++|.| ..++|++++.||.++|||+..+.++..+ ..|..+|+++.|--+| +|++++
T Consensus 188 tg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l-sgHT~~VTCvrwGG~g-liySgS 265 (480)
T KOG0271|consen 188 TGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL-SGHTASVTCVRWGGEG-LIYSGS 265 (480)
T ss_pred CCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe-ccCccceEEEEEcCCc-eEEecC
Confidence 88754 57889999999999976 4568999999999999999988877665 4677889999997555 788999
Q ss_pred cCCeEEEEeCCCCcEEEEEeccCCce------------------------------------------------------
Q 020798 220 LDNTLRLWNYSTGKILKTYTGHTNSK------------------------------------------------------ 245 (321)
Q Consensus 220 ~d~~i~i~d~~~~~~~~~~~~~~~~~------------------------------------------------------ 245 (321)
.|++|++|+...|+..+.+.+|..-+
T Consensus 266 ~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd 345 (480)
T KOG0271|consen 266 QDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDD 345 (480)
T ss_pred CCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCC
Confidence 99999999987765544444331100
Q ss_pred ----------------------eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEE
Q 020798 246 ----------------------YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303 (321)
Q Consensus 246 ----------------------~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 303 (321)
..+.-..+.||++++|+++-|..|++|+.++++.+..++||-.+|..++|+.|.++|+
T Consensus 346 ~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlV 425 (480)
T KOG0271|consen 346 FTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLV 425 (480)
T ss_pred ceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEE
Confidence 0112233457999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCccEEEccccc
Q 020798 304 SGALDNDRTVKIWTQEK 320 (321)
Q Consensus 304 s~~~d~~~~i~iw~~~~ 320 (321)
+||. |.++|+|+.+.
T Consensus 426 S~Sk--DsTLKvw~V~t 440 (480)
T KOG0271|consen 426 SGSK--DSTLKVWDVRT 440 (480)
T ss_pred EcCC--CceEEEEEeee
Confidence 9995 47999999864
No 10
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=1.3e-42 Score=256.28 Aligned_cols=270 Identities=22% Similarity=0.423 Sum_probs=232.4
Q ss_pred CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc--eeeeeec
Q 020798 36 RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT--CLKTLIG 113 (321)
Q Consensus 36 ~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~ 113 (321)
-+|+++|.|-+|++|.... .....+++-.+..|+.+.+.|+++.|++++. -.|++||+.++. ++.++.+
T Consensus 11 viLvsA~YDhTIRfWqa~t--------G~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~ 81 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALT--------GICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEG 81 (311)
T ss_pred eEEEeccCcceeeeeehhc--------CeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEec
Confidence 4789999999999996543 3455566666778999999999999998875 469999998764 5778899
Q ss_pred CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceee
Q 020798 114 HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193 (321)
Q Consensus 114 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 193 (321)
|...|..+.|..+|+.+++|+.||++++||++...+.+.+ .|..+|+++..+|+...|++|..+|.|++||+....+..
T Consensus 82 h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~ 160 (311)
T KOG0315|consen 82 HTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTH 160 (311)
T ss_pred cCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccc
Confidence 9999999999999999999999999999999986665555 467999999999999999999999999999999988888
Q ss_pred eeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC------cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC
Q 020798 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG------KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267 (321)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 267 (321)
.+..+....+..+...|+|.+++.+...|+..+|++.+. +++..++.|.+. +..+..+|++++||+++.|.
T Consensus 161 ~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~---il~C~lSPd~k~lat~ssdk 237 (311)
T KOG0315|consen 161 ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGH---ILRCLLSPDVKYLATCSSDK 237 (311)
T ss_pred ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccce---EEEEEECCCCcEEEeecCCc
Confidence 887777788999999999999999999999999998654 345566666553 23344568999999999999
Q ss_pred eEEEEEcccc-eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 268 CVYLWELQSR-KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 268 ~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+++||+.... +....+++|...+++++||.|+.||++|+. |..+++|+++.
T Consensus 238 tv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTass--d~~~rlW~~~~ 289 (311)
T KOG0315|consen 238 TVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASS--DHTARLWDLSA 289 (311)
T ss_pred eEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCC--CCceeeccccc
Confidence 9999999887 667788999999999999999999999995 48999999864
No 11
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1e-44 Score=284.31 Aligned_cols=285 Identities=27% Similarity=0.506 Sum_probs=247.1
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
.-..+|..++|.|+|+.|++|+..|.+.+|...... ....+..|+..|+++.|++++.++++|..+|.|++|
T Consensus 94 Kvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fn--------FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyW 165 (464)
T KOG0284|consen 94 KVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFN--------FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYW 165 (464)
T ss_pred ccccceeeEEEcCCCceeEeecccccEEEecCceee--------HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEec
Confidence 345689999999999999999999999999653321 123456899999999999999999999999999999
Q ss_pred ecCCcceeeeeec-CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC
Q 020798 101 DVPTATCLKTLIG-HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179 (321)
Q Consensus 101 d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 179 (321)
+..-+. ++.+.+ |.+.|.+++|+|+...|++|+.||+|++||....+....+.+|.-.|.+++|+|...++++++.|.
T Consensus 166 qpnmnn-Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDn 244 (464)
T KOG0284|consen 166 QPNMNN-VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDN 244 (464)
T ss_pred ccchhh-hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCc
Confidence 976554 344444 458999999999999999999999999999998888888899999999999999999999999999
Q ss_pred eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeE
Q 020798 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259 (321)
Q Consensus 180 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (321)
.|++||.+++.++.++. .+...|..+.|+|++++|++++.|..+++||+++.+.+..+.+|.....++. +.+-...+
T Consensus 245 lVKlWDprSg~cl~tlh-~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~--WhP~~~~l 321 (464)
T KOG0284|consen 245 LVKLWDPRSGSCLATLH-GHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLT--WHPLNESL 321 (464)
T ss_pred eeEeecCCCcchhhhhh-hccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeec--cccccccc
Confidence 99999999999988764 4567799999999999999999999999999999999999999988766553 44556788
Q ss_pred EEEeCCCCeEEEEEcccceEEEEe-cCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 260 IVSGSEDSCVYLWELQSRKVVQKL-EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
|.+|+.||.|..|.+...+.+..+ .+|...|++++|||-|-+|++|+ +|.++++|...
T Consensus 322 ftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgs--nd~t~rfw~r~ 380 (464)
T KOG0284|consen 322 FTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGS--NDRTVRFWTRN 380 (464)
T ss_pred eeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecC--CCcceeeeccC
Confidence 999999999999999855554444 56999999999999999999998 56899999753
No 12
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=1.1e-44 Score=289.89 Aligned_cols=299 Identities=28% Similarity=0.557 Sum_probs=263.5
Q ss_pred ccCCcceeeeeccCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC
Q 020798 8 ESFRPYTLTQTLNGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR 86 (321)
Q Consensus 8 ~~~~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~ 86 (321)
+-+.|-.....+.||..+|+++.|.| .+.+|++++.|+.|++|++.. ....++++.+|..+|.+++|+++|.
T Consensus 199 rc~~Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~-------~~~~lrtf~gH~k~Vrd~~~s~~g~ 271 (503)
T KOG0282|consen 199 RCYLPKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD-------DRRCLRTFKGHRKPVRDASFNNCGT 271 (503)
T ss_pred eeeccHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEec-------CcceehhhhcchhhhhhhhccccCC
Confidence 44557778889999999999999999 899999999999999998754 2456889999999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEE
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 165 (321)
.+++++-|+.+++||++++++...+. ....+.|+.|+|++ +.|++|+.|+.|+.||+++++.++.+..|-+.|..+.|
T Consensus 272 ~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F 350 (503)
T KOG0282|consen 272 SFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITF 350 (503)
T ss_pred eeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEE
Confidence 99999999999999999999887764 35567899999998 88999999999999999999999999999999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC---cEEEEEeccC
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG---KILKTYTGHT 242 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~ 242 (321)
-++++.+++.+.|+++++|+.+.+..++.+.........++..+|+++++++-+.|+.|.+|.+... ...+.+.+|.
T Consensus 351 ~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~ 430 (503)
T KOG0282|consen 351 VDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHS 430 (503)
T ss_pred ccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhccee
Confidence 9999999999999999999998876666555444555678899999999999999999999986532 2345677887
Q ss_pred CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCC-ceEEEEeecCCccEEEcc
Q 020798 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE-NIIASGALDNDRTVKIWT 317 (321)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~~~d~~~~i~iw~ 317 (321)
...+.+.+.|+ +||++|++|+.||.+.+||.++.+++..+++|.+++..+.|||.. ..+|+++.| |.|++|+
T Consensus 431 vaGys~~v~fS-pDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~--G~Ikiwd 503 (503)
T KOG0282|consen 431 VAGYSCQVDFS-PDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWD--GLIKIWD 503 (503)
T ss_pred ccCceeeEEEc-CCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccC--ceeEecC
Confidence 77777766665 799999999999999999999999999999999999999999986 678888875 8999996
No 13
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=2.6e-42 Score=260.98 Aligned_cols=287 Identities=29% Similarity=0.524 Sum_probs=245.8
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
..+.||.+.|+.+.|+|+|..||+|+.|..|.+|.+.+- .+....+++|++.|..+.|.++++.+++++.|.+
T Consensus 41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gd-------ceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGD-------CENFWVLKGHSGAVMELHGMRDGSHILSCGTDKT 113 (338)
T ss_pred hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccc-------ccceeeeccccceeEeeeeccCCCEEEEecCCce
Confidence 446899999999999999999999999999999985431 2234556799999999999999999999999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
++.||++++++.+.+++|...+..+..+.-|. .+.+++.|+++++||+++..++++++. .-+++++.|..++..+++|
T Consensus 114 v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-kyqltAv~f~d~s~qv~sg 192 (338)
T KOG0265|consen 114 VRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN-KYQLTAVGFKDTSDQVISG 192 (338)
T ss_pred EEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc-ceeEEEEEecccccceeec
Confidence 99999999999999999999999888554454 466788999999999999888877643 5578999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC----CcEEEEEeccCCc--eeEEE
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----GKILKTYTGHTNS--KYCIS 249 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~--~~~~~ 249 (321)
+-|+.|++||++.+.....+ ..+..+|+.+..+|+|.++.+-+.|+++++||++. .+.+..+.++... ...+.
T Consensus 193 gIdn~ikvWd~r~~d~~~~l-sGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~ 271 (338)
T KOG0265|consen 193 GIDNDIKVWDLRKNDGLYTL-SGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLK 271 (338)
T ss_pred cccCceeeeccccCcceEEe-ecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcce
Confidence 99999999999988766655 45667899999999999999999999999999874 3447777765422 22233
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEE
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKI 315 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~i 315 (321)
+.+.+++..+.+|+.|+.+++||....+.+.++.||.+.|+++.|+|.+.+|.+++.| ++|++
T Consensus 272 -cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sd--k~i~l 334 (338)
T KOG0265|consen 272 -CSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSD--KTIYL 334 (338)
T ss_pred -eeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccC--ceeEe
Confidence 3345789999999999999999999999999999999999999999999999999965 67765
No 14
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-42 Score=269.08 Aligned_cols=291 Identities=33% Similarity=0.608 Sum_probs=262.3
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
+.+.+.+.+|..+|+.+-|+|+-..++++++|+++++||.... +....+++|..++.+++|+..|++|++++
T Consensus 98 p~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg--------~~e~~LrGHt~sv~di~~~a~Gk~l~tcS 169 (406)
T KOG0295|consen 98 PNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETG--------ELERSLRGHTDSVFDISFDASGKYLATCS 169 (406)
T ss_pred CCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccch--------hhhhhhhccccceeEEEEecCccEEEecC
Confidence 4678888999999999999999999999999999999987643 34677899999999999999999999999
Q ss_pred CCCcEEEEecCC-cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCE
Q 020798 93 DDKTIRLWDVPT-ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171 (321)
Q Consensus 93 ~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 171 (321)
.|-.+++||..+ .++++.+.+|...|.++.|-|.|+++++++.|.+|+.|++.++-++.++++|..-+..++.+.||.+
T Consensus 170 sDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti 249 (406)
T KOG0295|consen 170 SDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTI 249 (406)
T ss_pred CccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeE
Confidence 999999999987 5778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC---------------CCEEEEEecCCeEEEEeCCCCcEEE
Q 020798 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN---------------GKFILVGTLDNTLRLWNYSTGKILK 236 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---------------g~~l~~~~~d~~i~i~d~~~~~~~~ 236 (321)
+++++.|.++++|-+.+.++...+ ..++.++.+++|.|. ++++++++.|++|++||+.++..+.
T Consensus 250 ~As~s~dqtl~vW~~~t~~~k~~l-R~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~ 328 (406)
T KOG0295|consen 250 IASCSNDQTLRVWVVATKQCKAEL-REHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLF 328 (406)
T ss_pred EEecCCCceEEEEEeccchhhhhh-hccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEE
Confidence 999999999999999887654433 456667888888653 3589999999999999999999999
Q ss_pred EEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
++.+|.+-+.. ....|.|+||+++..|+++++||++++++.+.+..|...|+++.|+.+..++++|+.| ..+++|
T Consensus 329 tL~ghdnwVr~---~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVd--qt~Kvw 403 (406)
T KOG0295|consen 329 TLVGHDNWVRG---VAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVD--QTVKVW 403 (406)
T ss_pred EEecccceeee---eEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEecccc--ceeeee
Confidence 99999876443 3445789999999999999999999999999999999999999999999999999976 689998
Q ss_pred c
Q 020798 317 T 317 (321)
Q Consensus 317 ~ 317 (321)
-
T Consensus 404 E 404 (406)
T KOG0295|consen 404 E 404 (406)
T ss_pred e
Confidence 4
No 15
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=1.8e-42 Score=267.73 Aligned_cols=299 Identities=26% Similarity=0.526 Sum_probs=261.5
Q ss_pred cccccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC
Q 020798 5 QSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD 84 (321)
Q Consensus 5 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~ 84 (321)
..++..-|+++.+.++||.+.|.|+++.|..+.|++|+.|++++|||+.. ......+++|-..|..+++++-
T Consensus 133 ~rPeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlat--------g~LkltltGhi~~vr~vavS~r 204 (460)
T KOG0285|consen 133 PRPEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLAT--------GQLKLTLTGHIETVRGVAVSKR 204 (460)
T ss_pred CCccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEccc--------CeEEEeecchhheeeeeeeccc
Confidence 34566678999999999999999999999999999999999999999864 3356778999999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
..|+++++.|+.|+-||++.++.++.+.+|-..|.|++.+|.-..|++|+.|.++++||+++...+..+.+|..+|.++.
T Consensus 205 HpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~ 284 (460)
T KOG0285|consen 205 HPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVM 284 (460)
T ss_pred CceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 244 (321)
+.|....+++|+.|++|++||++.++.+..+. .+...+.+++.+|....+++++.|. |+-|++..+..+..+.+|..-
T Consensus 285 ~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt-~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsgh~~i 362 (460)
T KOG0285|consen 285 CQPTDPQVITGSHDSTVRLWDLRAGKTMITLT-HHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSGHNAI 362 (460)
T ss_pred eecCCCceEEecCCceEEEeeeccCceeEeee-cccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhccccccce
Confidence 99988899999999999999999998777664 5667799999999999888888775 999999999988888887664
Q ss_pred eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec-----C---CCCCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE-----G---HTDPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-----~---h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
...+.. ....++++|+.+|.+.+||.+++-..+... | -...|.+.+|...|..|++|.. |.+|++|
T Consensus 363 intl~~----nsD~v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~ea--dKtIk~~ 436 (460)
T KOG0285|consen 363 INTLSV----NSDGVLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEA--DKTIKMY 436 (460)
T ss_pred eeeeee----ccCceEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccC--CcceEEE
Confidence 443332 345688999999999999998875443331 1 1346889999999999999974 5799999
Q ss_pred ccc
Q 020798 317 TQE 319 (321)
Q Consensus 317 ~~~ 319 (321)
..+
T Consensus 437 keD 439 (460)
T KOG0285|consen 437 KED 439 (460)
T ss_pred ecc
Confidence 764
No 16
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.7e-41 Score=270.82 Aligned_cols=301 Identities=28% Similarity=0.432 Sum_probs=250.9
Q ss_pred ceeeeeccCCcccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccc--cc----cccccEEEEEECCCC
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQK--FT----GHEQGVSDLVFSSDS 85 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~--~~----~h~~~i~~~~~~~~~ 85 (321)
....+.+. |..+|.+.+|+|-.. .+++++.|-..++|++................ +. .....|++++|+.+|
T Consensus 169 ~~~~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G 247 (524)
T KOG0273|consen 169 SSKAKVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDG 247 (524)
T ss_pred ccceeecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCC
Confidence 34445555 999999999999777 89999999999999886521111110000000 01 123679999999999
Q ss_pred CEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEE
Q 020798 86 RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 165 (321)
..|++|+.||.+++|+.... .+.++..|.++|+++.|+.+|++|++++.|+++.+||..+++..+.+..|..+..++.|
T Consensus 248 ~~LatG~~~G~~riw~~~G~-l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW 326 (524)
T KOG0273|consen 248 TLLATGSEDGEARIWNKDGN-LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDW 326 (524)
T ss_pred CeEEEeecCcEEEEEecCch-hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEE
Confidence 99999999999999997654 46778889999999999999999999999999999999999999999999998888999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
..+ ..|++++.|+.|+++.+....+..++.. |...|..+.|+|.|.+|++++.|++++||+.........+..|...+
T Consensus 327 ~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~G-H~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei 404 (524)
T KOG0273|consen 327 QSN-DEFATSSTDGCIHVCKVGEDRPVKTFIG-HHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEI 404 (524)
T ss_pred ecC-ceEeecCCCceEEEEEecCCCcceeeec-ccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccce
Confidence 754 4689999999999999987777777765 77789999999999999999999999999998888888888888766
Q ss_pred eEEEeEE------EecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 246 YCISSTF------SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 246 ~~~~~~~------~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+.+...- .+..+..+++++.|++|++||+..+.+++.+..|..+|.+|+|+|+++++|+|+.| |.|.||+.+
T Consensus 405 ~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~d--g~V~iws~~ 482 (524)
T KOG0273|consen 405 YTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLD--GCVHIWSTK 482 (524)
T ss_pred eeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCC--CeeEecccc
Confidence 5543321 11235689999999999999999999999999999999999999999999999965 789999875
No 17
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=4.6e-40 Score=268.84 Aligned_cols=287 Identities=43% Similarity=0.758 Sum_probs=249.4
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
+.+++|..+|++++|+|++++|++++.|+.+.+|++... .....+..|...+..+.|+|+++++++++.++.
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 74 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETG--------ELLRTLKGHTGPVRDVAASADGTYLASGSSDKT 74 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCC--------CcEEEEecCCcceeEEEECCCCCEEEEEcCCCe
Confidence 457799999999999999999999999999999987542 234556778888999999999999999999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS 176 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 176 (321)
|++|++.+++....+..|...+.++.|+|+++++++++.++.+++||+++++....+..|...+.+++|+|++.++++++
T Consensus 75 i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 154 (289)
T cd00200 75 IRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS 154 (289)
T ss_pred EEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc
Confidence 99999998877788888998999999999988888888899999999998888888888999999999999988888888
Q ss_pred CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC
Q 020798 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 177 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
.++.+++||+++++....+. .+...+..+.|+|+++.+++++.++.+++||++.++.+..+..+......+ ...++
T Consensus 155 ~~~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~---~~~~~ 230 (289)
T cd00200 155 QDGTIKLWDLRTGKCVATLT-GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSV---AFSPD 230 (289)
T ss_pred CCCcEEEEEccccccceeEe-cCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEE---EEcCC
Confidence 89999999998776655543 445578899999999999999999999999999988888876666544333 33456
Q ss_pred CeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 257 GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
+.++++++.||.|++||+.+++.+..+..|..+|.+++|+|++.+|++++. |+.|++|+
T Consensus 231 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~iw~ 289 (289)
T cd00200 231 GYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSA--DGTIRIWD 289 (289)
T ss_pred CcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecC--CCeEEecC
Confidence 888888888999999999988888888899999999999999999999984 57999996
No 18
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=2.4e-40 Score=246.98 Aligned_cols=289 Identities=29% Similarity=0.478 Sum_probs=233.5
Q ss_pred eeeeeccCCcccEEEEEECCC-CCEEEEecCCceEEEeeccccCCCCCCCCCccccc-ccccccEEEEEECCCCCEEEEE
Q 020798 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKF-TGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
.+.+.+++|++.+..++|+|- |.+||+|+.|+.|++|+...... ......+ .+|+..|++++|+|.|++|++|
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s-----~~ck~vld~~hkrsVRsvAwsp~g~~La~a 79 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDS-----WTCKTVLDDGHKRSVRSVAWSPHGRYLASA 79 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCc-----EEEEEeccccchheeeeeeecCCCcEEEEe
Confidence 356778999999999999998 99999999999999998764111 1111112 3799999999999999999999
Q ss_pred eCCCcEEEEecCC--cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC---EEEEEEeCCCCCeeEEEEc
Q 020798 92 SDDKTIRLWDVPT--ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG---KCLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 92 ~~d~~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~v~~~~~~ 166 (321)
+-|.++.||.-.. .+++..+.||.+.|.+++|+++|++||+|+.|+.+-+|.+..+ ++...++.|...|..+.|+
T Consensus 80 SFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WH 159 (312)
T KOG0645|consen 80 SFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWH 159 (312)
T ss_pred eccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEc
Confidence 9999999997653 4678889999999999999999999999999999999998744 4677889999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEeCCC---CceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC
Q 020798 167 RDGTMIVTSSYDGLCRIWDAST---GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN 243 (321)
Q Consensus 167 ~~~~~l~~~~~dg~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 243 (321)
|...+|+++++|++|++|+-.. -.+...+ ..+...+.+++|++.|..|++++.|++++||...+.- -..|..
T Consensus 160 Pt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl-~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~----~~~~sr 234 (312)
T KOG0645|consen 160 PTEDLLFSCSYDNTIKVYRDEDDDDWECVQTL-DGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL----SGMHSR 234 (312)
T ss_pred CCcceeEEeccCCeEEEEeecCCCCeeEEEEe-cCccceEEEEEecCCCceEEEecCCcceEeeeeccCc----chhccc
Confidence 9999999999999999997652 2345554 4555689999999999999999999999999855221 011234
Q ss_pred ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc------eEE-EEecCCCCCeEEEEecCC-CceEEEEeecCCccEEE
Q 020798 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR------KVV-QKLEGHTDPVISVASHPT-ENIIASGALDNDRTVKI 315 (321)
Q Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~------~~~-~~~~~h~~~v~~~~~~p~-~~~l~s~~~d~~~~i~i 315 (321)
..+.+... ...|++++.|+.|++|.-... +++ +.-..|...|++++|+|. .++|++|| +||.|++
T Consensus 235 ~~Y~v~W~-----~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~--DDG~v~~ 307 (312)
T KOG0645|consen 235 ALYDVPWD-----NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGG--DDGIVNF 307 (312)
T ss_pred ceEeeeec-----ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecC--CCceEEE
Confidence 44433321 457999999999999987542 112 234568899999999995 68899988 4599999
Q ss_pred cccc
Q 020798 316 WTQE 319 (321)
Q Consensus 316 w~~~ 319 (321)
|.++
T Consensus 308 W~l~ 311 (312)
T KOG0645|consen 308 WELE 311 (312)
T ss_pred EEec
Confidence 9876
No 19
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=6.4e-40 Score=265.15 Aligned_cols=297 Identities=24% Similarity=0.444 Sum_probs=237.9
Q ss_pred CcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccc---ccccccEEEEEECCCCCE
Q 020798 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKF---TGHEQGVSDLVFSSDSRF 87 (321)
Q Consensus 11 ~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~---~~h~~~i~~~~~~~~~~~ 87 (321)
.|+++..++..|.+-|.|++|+|||+++|+++.||.+.+||=... +.+..+ .+|+++|.+++|+||++.
T Consensus 178 PPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktg--------e~vg~l~~~~aHkGsIfalsWsPDs~~ 249 (603)
T KOG0318|consen 178 PPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTG--------EKVGELEDSDAHKGSIFALSWSPDSTQ 249 (603)
T ss_pred CCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCc--------cEEEEecCCCCccccEEEEEECCCCce
Confidence 488889999999999999999999999999999999999975432 233333 489999999999999999
Q ss_pred EEEEeCCCcEEEEecCCccee-------------------------------------------eeeecCcccEEEEEEC
Q 020798 88 LVSASDDKTIRLWDVPTATCL-------------------------------------------KTLIGHTNYVFCVNFN 124 (321)
Q Consensus 88 l~~~~~d~~i~iwd~~~~~~~-------------------------------------------~~~~~~~~~v~~~~~~ 124 (321)
+++++.|.+++|||+.+.+++ +.+.+|...|+++..+
T Consensus 250 ~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~ 329 (603)
T KOG0318|consen 250 FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVS 329 (603)
T ss_pred EEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEc
Confidence 999999999999998665432 1245899999999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCEEEEEE-eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCcee-----------
Q 020798 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVL-PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM----------- 192 (321)
Q Consensus 125 ~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~----------- 192 (321)
|++.+|++|+.||.|.-|+..++..-... ..|...|..++-+..+ .+++++.|.++++.++......
T Consensus 330 ~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~-~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP 408 (603)
T KOG0318|consen 330 PDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESG-ELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQP 408 (603)
T ss_pred CCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCC-cEEEEecCCeEEEEecccCcccccceeecCCCc
Confidence 99999999999999999999888755443 5788899999877544 5778999999999876321100
Q ss_pred ee-------------------ecc--------CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEE--EEeccCC
Q 020798 193 KT-------------------LID--------DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK--TYTGHTN 243 (321)
Q Consensus 193 ~~-------------------~~~--------~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~ 243 (321)
+. ++. .......+++++|+++.+++|+.|+.++||.+....+.. ....|..
T Consensus 409 ~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a 488 (603)
T KOG0318|consen 409 KGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRA 488 (603)
T ss_pred eeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccC
Confidence 00 000 011234578999999999999999999999998755432 3445655
Q ss_pred ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEE-ecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccccC
Q 020798 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK-LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~~ 321 (321)
...+ ....||+.+||+|...+.+.+||+.+++.... +.=|...|++++|+|+..++|+||.|. .|.||++++.
T Consensus 489 ~iT~---vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt--~Viiysv~kP 562 (603)
T KOG0318|consen 489 AITD---VAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDT--NVIIYSVKKP 562 (603)
T ss_pred CceE---EEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccc--eEEEEEccCh
Confidence 5444 44568999999999999999999998876433 333999999999999999999999984 6999999863
No 20
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=3.2e-40 Score=248.85 Aligned_cols=251 Identities=25% Similarity=0.479 Sum_probs=222.3
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
+.+..-...|..++|+|.|+++|.|+-|+...||++...+.. ......+.+.+|.+.+.++.|.+|+ .|+|++.|.+
T Consensus 91 haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~--g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~T 167 (343)
T KOG0286|consen 91 HAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAE--GNVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMT 167 (343)
T ss_pred eEEecCceeEEEEEECCCCCeEEecCcCceeEEEeccccccc--ccceeeeeecCccceeEEEEEcCCC-ceEecCCCce
Confidence 334445667999999999999999999999999998743221 1223456789999999999999865 6889999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
..+||+++++....+.+|.+.|.+++++| +++.|++|+.|+..++||++.+.+.+.|++|+..|.++.|.|+|.-|++|
T Consensus 168 CalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatG 247 (343)
T KOG0286|consen 168 CALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATG 247 (343)
T ss_pred EEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeec
Confidence 99999999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeeecc-CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 176 SYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
+.|+++++||++..+.+..+.. ....++++++|+..|++|++|..|.++.+||.-.++.+..+.+|.+.+.|+.. .
T Consensus 248 SDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~---s 324 (343)
T KOG0286|consen 248 SDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGV---S 324 (343)
T ss_pred CCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEE---C
Confidence 9999999999998776655533 23457899999999999999999999999999999999999999988766654 4
Q ss_pred cCCeEEEEeCCCCeEEEEE
Q 020798 255 TNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd 273 (321)
|||..+++|+.|.++|||.
T Consensus 325 ~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 325 PDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCCcEEEecchhHheeecC
Confidence 8999999999999999994
No 21
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.7e-41 Score=286.48 Aligned_cols=273 Identities=29% Similarity=0.568 Sum_probs=235.4
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...++|..|++|+++||.|-.|..|++|.+... .+..++.- . +...+=+.+.|-.+.+.|.
T Consensus 378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~---------kl~~lk~~-------~---~l~~~d~~sad~~~~~~D~ 438 (707)
T KOG0263|consen 378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPK---------KLKKLKDA-------S---DLSNIDTESADVDVDMLDD 438 (707)
T ss_pred CCcceeEeecCCcchhhccccccEEEEEecchh---------hhccccch-------h---hhccccccccchhhhhccc
Confidence 357999999999999999999999999977521 12222211 1 1112334555656777777
Q ss_pred CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEE
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 182 (321)
.+....+.+.+|.++|..+.|+|+.++|++|+.|+++|+|.+.+..+...+.+|..||+.+.|+|.|-+|++++.|++.+
T Consensus 439 ~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tAr 518 (707)
T KOG0263|consen 439 DSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTAR 518 (707)
T ss_pred cCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceee
Confidence 77777778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEE
Q 020798 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262 (321)
Q Consensus 183 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (321)
+|.....++.+. ...+...+.++.|+|+..|+++|+.|.++++||+.+|..++.|.+|..++.++. ..++|++|++
T Consensus 519 LWs~d~~~PlRi-faghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~---~Sp~Gr~LaS 594 (707)
T KOG0263|consen 519 LWSTDHNKPLRI-FAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALA---FSPCGRYLAS 594 (707)
T ss_pred eeecccCCchhh-hcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEE---EcCCCceEee
Confidence 999887665544 456777899999999999999999999999999999999999999998865543 3479999999
Q ss_pred eCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
|+.||.|.+||+.+++++..+.+|.+.|.++.|+.+|..||+||.| .+|++||..+
T Consensus 595 g~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~D--nsV~lWD~~~ 650 (707)
T KOG0263|consen 595 GDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGAD--NSVRLWDLTK 650 (707)
T ss_pred cccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCC--CeEEEEEchh
Confidence 9999999999999999999999999999999999999999999965 6899999865
No 22
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=5.7e-40 Score=262.09 Aligned_cols=280 Identities=23% Similarity=0.451 Sum_probs=245.0
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...|++++|+.+|+.||+|+.||.+++|+.. ...+..+..|+++|.++.|+..|.+|++++.|+++.+||.
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~---------G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~ 305 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKD---------GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDA 305 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEecC---------chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEec
Confidence 4689999999999999999999999999754 3456778899999999999999999999999999999999
Q ss_pred CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEE
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 182 (321)
.+++....+.-|..+...+.|-.+ ..|++++.|+.|+++.+...+++.++.+|.++|.++.|+|.+.+|++++.|++++
T Consensus 306 ~~g~~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~Tlk 384 (524)
T KOG0273|consen 306 HTGTVKQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLK 384 (524)
T ss_pred cCceEEEeeeeccCCccceEEecC-ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeE
Confidence 999888888888887667777654 5789999999999999998899999999999999999999999999999999999
Q ss_pred EEeCCCCceeeeeccCCCCCeEEEEEccCC---------CEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEE
Q 020798 183 IWDASTGHCMKTLIDDENPPVSFVKFSPNG---------KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253 (321)
Q Consensus 183 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
+|......+...+. .|...|..+.|+|+| ..+++++.|+++++||+..+.++..+..|+.+++.+.+
T Consensus 385 iWs~~~~~~~~~l~-~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvaf--- 460 (524)
T KOG0273|consen 385 IWSMGQSNSVHDLQ-AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAF--- 460 (524)
T ss_pred eeecCCCcchhhhh-hhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEe---
Confidence 99977665555443 455567788898865 46889999999999999999999999999999887654
Q ss_pred ecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.++|+++|+|+.||.|.+|+.+++++++.+.+ .+.|..|.|+.+|+.|..+.. |+.+.+-|+.
T Consensus 461 S~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~s--d~~vcvldlr 523 (524)
T KOG0273|consen 461 SPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGACAS--DGSVCVLDLR 523 (524)
T ss_pred cCCCcEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEEEec--CCCceEEEec
Confidence 48999999999999999999999999998876 456999999999998887764 5778887764
No 23
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=9.5e-40 Score=241.09 Aligned_cols=283 Identities=24% Similarity=0.531 Sum_probs=234.0
Q ss_pred CccccccCCcce--eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEE
Q 020798 3 SDQSLESFRPYT--LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLV 80 (321)
Q Consensus 3 ~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 80 (321)
-|++|+.+..-+ ..++++.-...|..+...||++.||+++ ...|++||+.. ..+.|+..+.+|...|..+.
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S------~np~Pv~t~e~h~kNVtaVg 90 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNS------NNPNPVATFEGHTKNVTAVG 90 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccC------CCCCceeEEeccCCceEEEE
Confidence 356666666443 4455554566899999999999999987 56899999864 34458899999999999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE-EeCCCCC
Q 020798 81 FSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV-LPAHSDP 159 (321)
Q Consensus 81 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~ 159 (321)
|..+|+++++|+.||+++|||++...+.+. ..|.++|.++..+|+-..|++|..+|.|++||+....+... ++....+
T Consensus 91 F~~dgrWMyTgseDgt~kIWdlR~~~~qR~-~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~ 169 (311)
T KOG0315|consen 91 FQCDGRWMYTGSEDGTVKIWDLRSLSCQRN-YQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTS 169 (311)
T ss_pred EeecCeEEEecCCCceEEEEeccCcccchh-ccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcc
Confidence 999999999999999999999999766554 45789999999999999999999999999999988765543 4556678
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceee-----eeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC-c
Q 020798 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-----TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG-K 233 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~-~ 233 (321)
+.++...|+|.+++.+...|.+++|++.+..... ..+..+...+..+.++|++++|++++.|.+++||+..+. +
T Consensus 170 i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~k 249 (311)
T KOG0315|consen 170 IQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFK 249 (311)
T ss_pred eeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCcee
Confidence 9999999999999999999999999986543221 123345667888999999999999999999999999887 5
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEec
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 296 (321)
....+++|+.- ...+.|+ .|++||++|+.|+.+++|++..++.+..+.+|..+..+++.+
T Consensus 250 le~~l~gh~rW--vWdc~FS-~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 250 LELVLTGHQRW--VWDCAFS-ADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred eEEEeecCCce--EEeeeec-cCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 56667777643 3444444 689999999999999999999999999999999888887764
No 24
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.1e-39 Score=252.69 Aligned_cols=291 Identities=19% Similarity=0.362 Sum_probs=241.8
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
.-...+.+|...|.+++.+|+.++++||+.|....+|+.... .....+++|+..|.++.|+.+|.+||||..
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~g--------e~~~eltgHKDSVt~~~FshdgtlLATGdm 126 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTG--------EFAGELTGHKDSVTCCSFSHDGTLLATGDM 126 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCC--------cceeEecCCCCceEEEEEccCceEEEecCC
Confidence 345778999999999999999999999999999999987542 245678899999999999999999999999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
+|.|+||...++.....+...-+.+.-+.|+|.+..|++|+.||.+.+|.+.++...+.+.+|..++++-.|.|+|+.++
T Consensus 127 sG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~ 206 (399)
T KOG0296|consen 127 SGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRIL 206 (399)
T ss_pred CccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEE
Confidence 99999999999987777765667788899999999999999999999999998888889999999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeeeeccCCCC----------------------------------------------------
Q 020798 174 TSSYDGLCRIWDASTGHCMKTLIDDENP---------------------------------------------------- 201 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~---------------------------------------------------- 201 (321)
++..||+|++|++.++++...+......
T Consensus 207 tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~ 286 (399)
T KOG0296|consen 207 TGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELD 286 (399)
T ss_pred EEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhh
Confidence 9999999999999988766554311000
Q ss_pred -CeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEE
Q 020798 202 -PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 202 -~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
.+..+.++..=.+.++|+.||+|.|||+...++..... |...+ +...|. + ..+|++++.+|.|+.||.+++++.
T Consensus 287 esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V--~~l~w~-~-t~~l~t~c~~g~v~~wDaRtG~l~ 361 (399)
T KOG0296|consen 287 ESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGV--TKLKWL-N-TDYLLTACANGKVRQWDARTGQLK 361 (399)
T ss_pred hhhhhcccccccchhhcccccceEEEEecccchhheecc-CCCce--EEEEEc-C-cchheeeccCceEEeeeccccceE
Confidence 01112222233456888899999999998776655543 44443 333333 2 678999999999999999999999
Q ss_pred EEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 281 QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 281 ~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
..+.||..+|.+++++|++++++|+|.| ++.+++...
T Consensus 362 ~~y~GH~~~Il~f~ls~~~~~vvT~s~D--~~a~VF~v~ 398 (399)
T KOG0296|consen 362 FTYTGHQMGILDFALSPQKRLVVTVSDD--NTALVFEVP 398 (399)
T ss_pred EEEecCchheeEEEEcCCCcEEEEecCC--CeEEEEecC
Confidence 9999999999999999999999999954 678887653
No 25
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-40 Score=245.88 Aligned_cols=248 Identities=29% Similarity=0.566 Sum_probs=213.3
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
..+.++||...|..+..++||++.++++.|+.+++||+.. ..+.+.|.+|...|.+++|++|.+.+++|+.|
T Consensus 55 ~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~--------g~~t~~f~GH~~dVlsva~s~dn~qivSGSrD 126 (315)
T KOG0279|consen 55 PVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLAT--------GESTRRFVGHTKDVLSVAFSTDNRQIVSGSRD 126 (315)
T ss_pred eeeeeeccceEecceEEccCCceEEeccccceEEEEEecC--------CcEEEEEEecCCceEEEEecCCCceeecCCCc
Confidence 5678899999999999999999999999999999999864 24678899999999999999999999999999
Q ss_pred CcEEEEecCCcceeeeeec--CcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC
Q 020798 95 KTIRLWDVPTATCLKTLIG--HTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
.+|++|+...... .++.. +.+.|.|+.|+|+ ...|++++.|+++++||+++-+....+.+|...++.++++|||.
T Consensus 127 kTiklwnt~g~ck-~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGs 205 (315)
T KOG0279|consen 127 KTIKLWNTLGVCK-YTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGS 205 (315)
T ss_pred ceeeeeeecccEE-EEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCC
Confidence 9999999866543 33332 3788999999998 56899999999999999999998889999999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc-------CC
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH-------TN 243 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~ 243 (321)
+.++|+.||.+.+||++.++.+..+ ++...|..++|+|+.-+|+.+. +..|+|||+.++..+..+... ..
T Consensus 206 lcasGgkdg~~~LwdL~~~k~lysl--~a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~ 282 (315)
T KOG0279|consen 206 LCASGGKDGEAMLWDLNEGKNLYSL--EAFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAG 282 (315)
T ss_pred EEecCCCCceEEEEEccCCceeEec--cCCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccccccccccccC
Confidence 9999999999999999998876554 4567799999999987776655 445999999998877766432 12
Q ss_pred ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
...|++..++ .+|..|++|-.|+.|++|.+.
T Consensus 283 ~~~clslaws-~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 283 DPICLSLAWS-ADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred CcEEEEEEEc-CCCcEEEeeecCCcEEEEEee
Confidence 4567765554 689999999999999999975
No 26
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1.7e-38 Score=292.15 Aligned_cols=292 Identities=20% Similarity=0.381 Sum_probs=233.3
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeCCCcE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTI 97 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i 97 (321)
+..|...|.+++|+|+|++||+|+.|+.|++|++............+...+. +...+.+++|++. +++|++++.||.|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVV 557 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeE
Confidence 3458999999999999999999999999999987542211111111222333 3457899999874 7899999999999
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEc-cCCCEEEEE
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN-RDGTMIVTS 175 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~ 175 (321)
++||+.+++.+..+.+|...|++++|+| ++.+|++|+.|+.|++||++++..+..+..+ ..+.++.|+ +++..+++|
T Consensus 558 ~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latg 636 (793)
T PLN00181 558 QVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFG 636 (793)
T ss_pred EEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEE
Confidence 9999999988888999999999999997 6889999999999999999998888777654 578899995 568899999
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC------CcEEEEEeccCCceeEEE
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST------GKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~~~ 249 (321)
+.|+.|++||+++..........+...+..+.|. ++.++++++.|+.|++||++. .+.+..+.+|.....++.
T Consensus 637 s~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~ 715 (793)
T PLN00181 637 SADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVG 715 (793)
T ss_pred eCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEE
Confidence 9999999999987653222234566789999997 678999999999999999874 356778888876554433
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEE-------------ecCCCCCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK-------------LEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-------------~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
..+++.+|++|+.|+.|++|+......+.. ...|...|.+++|+|++.+|++|+. +|.|+||
T Consensus 716 ---~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~--dG~I~i~ 790 (793)
T PLN00181 716 ---LSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANS--TGNIKIL 790 (793)
T ss_pred ---EcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecC--CCcEEEE
Confidence 346789999999999999999865533211 1234567999999999999999984 5899999
Q ss_pred cc
Q 020798 317 TQ 318 (321)
Q Consensus 317 ~~ 318 (321)
++
T Consensus 791 ~~ 792 (793)
T PLN00181 791 EM 792 (793)
T ss_pred ec
Confidence 86
No 27
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=2.8e-41 Score=258.62 Aligned_cols=308 Identities=29% Similarity=0.520 Sum_probs=257.1
Q ss_pred ccccCCcceeeeecc-CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC
Q 020798 6 SLESFRPYTLTQTLN-GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD 84 (321)
Q Consensus 6 ~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~ 84 (321)
+.+..-|..+.+..+ |.+.-+.|..|||||+||++|+.||.+.+|+.................+--+.+.|.|+.|+.|
T Consensus 195 ~~Ee~~Pt~l~r~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRD 274 (508)
T KOG0275|consen 195 QEEERYPTQLARSIKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRD 274 (508)
T ss_pred hHhhhchHHhhhheecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeeccc
Confidence 444555666655544 5566788999999999999999999999998765433222223333455568899999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 163 (321)
...|++|+.||.|++|.+.++.|++.+. +|+..|.|+.|+.|+..+++++.|.++++.-+++|++++.+.+|...|+..
T Consensus 275 sEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a 354 (508)
T KOG0275|consen 275 SEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEA 354 (508)
T ss_pred HHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccce
Confidence 9999999999999999999999998885 899999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC-CCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD-ENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 164 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
.|.++|..+++++.||++++|+..+.+|..++... ...+++.+..-| +-..++++...+++.|.++. |+.++++...
T Consensus 355 ~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSG 433 (508)
T KOG0275|consen 355 TFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSG 433 (508)
T ss_pred EEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccC
Confidence 99999999999999999999999999888776432 345677766666 44678888888999999975 6777877543
Q ss_pred CC-ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 242 TN-SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 242 ~~-~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
.. ....+.++ ..|.|.++.+.++|+.++.|.+.++++...+.-|...|..++.||..+.||+=+ +||.+++|.
T Consensus 434 kREgGdFi~~~-lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYs--EDgllKLWk 507 (508)
T KOG0275|consen 434 KREGGDFINAI-LSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYS--EDGLLKLWK 507 (508)
T ss_pred CccCCceEEEE-ecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhc--ccchhhhcC
Confidence 22 22234333 347899999999999999999999999999999999999999999999999877 568999996
No 28
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.7e-38 Score=265.68 Aligned_cols=288 Identities=24% Similarity=0.483 Sum_probs=250.5
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC-CcE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD-KTI 97 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d-~~i 97 (321)
+......|++.+|++.-+.|++|-..|...+|.+.+. ..+..+.--...|..++|+..|.+|+.|+.. |++
T Consensus 261 ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f--------~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQL 332 (893)
T KOG0291|consen 261 LNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDF--------NLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQL 332 (893)
T ss_pred ecccccceeeeeccCCceEEEEEecCCeeEEEecCCc--------eEEEEeecccceeeEEEecccCCEEEEcCCccceE
Confidence 4444578999999999999999999999999976432 2344444445779999999999999988654 899
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY 177 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 177 (321)
-+|+..+...+...++|...+.+++++|||.++++|+.||.|++||.+++-|..++..|...|+.+.|+..++.+++.+-
T Consensus 333 lVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSL 412 (893)
T KOG0291|consen 333 LVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSL 412 (893)
T ss_pred EEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeec
Confidence 99999998888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC-eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC
Q 020798 178 DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN-TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 178 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
||+|+.||+...++.+++..+......+++.+|.|..+.+|+.|. .|.+|++++|+++..+.+|.+++.++.. .+.
T Consensus 413 DGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f---~~~ 489 (893)
T KOG0291|consen 413 DGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSF---SPD 489 (893)
T ss_pred CCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEE---ccc
Confidence 999999999988888888766666678899999999998888775 7999999999999999999998766543 467
Q ss_pred CeEEEEeCCCCeEEEEEcccce-EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 257 GKYIVSGSEDSCVYLWELQSRK-VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+..|++|+.|.+||+||+-... .+..+. +...+++++|+|+|+.||++..| |.|.+||.+.
T Consensus 490 ~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTld--gqItf~d~~~ 551 (893)
T KOG0291|consen 490 GSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELAVATLD--GQITFFDIKE 551 (893)
T ss_pred cCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEEEEEec--ceEEEEEhhh
Confidence 9999999999999999996552 333343 56689999999999999999875 7999999863
No 29
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=9.4e-38 Score=262.48 Aligned_cols=299 Identities=26% Similarity=0.532 Sum_probs=251.0
Q ss_pred cCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEE
Q 020798 9 SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFL 88 (321)
Q Consensus 9 ~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l 88 (321)
.+-|+.+.+.+.||...|.++.|+.|.++|++|+.|..+++|++..... .....+.+|++.|-..-|..+...+
T Consensus 131 ~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~------~~~~~l~gHkd~VvacfF~~~~~~l 204 (893)
T KOG0291|consen 131 EFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKN------LFTYALNGHKDYVVACFFGANSLDL 204 (893)
T ss_pred ccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccc------cceEeccCCCcceEEEEeccCcceE
Confidence 5778999999999999999999999999999999999999998875432 2345678999999999999999899
Q ss_pred EEEeCCCcEEEEecCC-----------------------cce--------------------------------------
Q 020798 89 VSASDDKTIRLWDVPT-----------------------ATC-------------------------------------- 107 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~-----------------------~~~-------------------------------------- 107 (321)
++.+.||.+.+|.... ++.
T Consensus 205 ~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgF 284 (893)
T KOG0291|consen 205 YTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGF 284 (893)
T ss_pred EEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEe
Confidence 9999999999997640 000
Q ss_pred ---------------eeeeecCcccEEEEEECCCCCEEEEeeCC-CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCE
Q 020798 108 ---------------LKTLIGHTNYVFCVNFNPQSNMIVSGAFD-ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171 (321)
Q Consensus 108 ---------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 171 (321)
++.+.-....|..++|+..|.+|+.|+.. |.+-+|+.++...+...++|...+++++++|||.+
T Consensus 285 ssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~ 364 (893)
T KOG0291|consen 285 SSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQL 364 (893)
T ss_pred cCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcE
Confidence 00000011234556667778888776543 78888888888878888899999999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeE
Q 020798 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 251 (321)
+++|+.||.|++||...+.|..++ ..|...++.+.|+..|+.+++++-||+|+.||+...+..+++...... ..++.
T Consensus 365 iaTG~eDgKVKvWn~~SgfC~vTF-teHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~--Qfscv 441 (893)
T KOG0291|consen 365 IATGAEDGKVKVWNTQSGFCFVTF-TEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPI--QFSCV 441 (893)
T ss_pred EEeccCCCcEEEEeccCceEEEEe-ccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCce--eeeEE
Confidence 999999999999999999998886 467788999999999999999999999999999999888888765432 23444
Q ss_pred EEecCCeEEEEeCCCC-eEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 252 FSVTNGKYIVSGSEDS-CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 252 ~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
...+.|..+.+|+.|. .|.||++++|+++..+.||.+||.+++|+|++..||+||+| .+|++||.
T Consensus 442 avD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWD--kTVRiW~i 507 (893)
T KOG0291|consen 442 AVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWD--KTVRIWDI 507 (893)
T ss_pred EEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEecccc--ceEEEEEe
Confidence 5557799999999887 59999999999999999999999999999999999999987 68999986
No 30
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=237.77 Aligned_cols=288 Identities=25% Similarity=0.394 Sum_probs=237.2
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcE
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
.|+||.++++.+.|+.+|.+|.+|+.|....+|- ..+.+.+-++.+|.+.|.++..+.+.+++++|+.|.++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~--------s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~ 76 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWY--------SLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTA 76 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEE--------ecCCceeeeecCCCceEEEEEecCCcceeeecccccee
Confidence 4789999999999999999999999999999993 23455677899999999999999999999999999999
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECCCCCEEEEee-----CCCcEEEEecC-------CCEEEEEEeCCCCCeeEEEE
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA-----FDETVRIWDVK-------TGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~dg~i~~wd~~-------~~~~~~~~~~~~~~v~~~~~ 165 (321)
++||+++++++..+. ....|..+.|+++|++++.+. ..+.|.++|++ ..++...++.+...++.+-|
T Consensus 77 kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W 155 (327)
T KOG0643|consen 77 KLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW 155 (327)
T ss_pred EEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence 999999999887765 567899999999999887654 34679999987 34567778888999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
.|-++.+++|..+|.|..||+++++........+...|+.+.++++..++++++.|.+-++||..+.+.++++.... ++
T Consensus 156 g~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~-Pv 234 (327)
T KOG0643|consen 156 GPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTER-PV 234 (327)
T ss_pred cccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecc-cc
Confidence 99999999999999999999999877666666677789999999999999999999999999999999999986532 22
Q ss_pred eEEEeEEEecCCeEEEEe-CCCC-------------eEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCc
Q 020798 246 YCISSTFSVTNGKYIVSG-SEDS-------------CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~-~~dg-------------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~ 311 (321)
.+ ....|...+++.| +++. .-++|++-..+.+.++++|-+||++++|||+|...++|++ ||
T Consensus 235 N~---aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGE--DG 309 (327)
T KOG0643|consen 235 NT---AAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGE--DG 309 (327)
T ss_pred cc---eecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCC--Cc
Confidence 22 2222333444433 3332 1233444444567788999999999999999999999995 58
Q ss_pred cEEEccccc
Q 020798 312 TVKIWTQEK 320 (321)
Q Consensus 312 ~i~iw~~~~ 320 (321)
.|++...++
T Consensus 310 ~VR~h~Fd~ 318 (327)
T KOG0643|consen 310 YVRLHHFDS 318 (327)
T ss_pred eEEEEEecc
Confidence 888876553
No 31
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=7.4e-39 Score=268.41 Aligned_cols=303 Identities=26% Similarity=0.445 Sum_probs=257.2
Q ss_pred CCCccccccC--CcceeeeeccCCcccEEEEEE-CCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEE
Q 020798 1 MSSDQSLESF--RPYTLTQTLNGHLRAISSVKF-SHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVS 77 (321)
Q Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~-s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 77 (321)
++++|.|..+ +.-++.+.+-|-.+.|..++| .|+.++||++++.+.+++|++.+.. -+.+.+|+..|.
T Consensus 299 vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~---------c~ii~GH~e~vl 369 (775)
T KOG0319|consen 299 VTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSY---------CQIIPGHTEAVL 369 (775)
T ss_pred EEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCc---------eEEEeCchhhee
Confidence 3567777777 555677778888999999997 5888999999999999999765422 236789999999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCcc----eeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEE--
Q 020798 78 DLVFSSDSRFLVSASDDKTIRLWDVPTAT----CLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCL-- 150 (321)
Q Consensus 78 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~-- 150 (321)
++....+|-+|++|+.|.++++|.++.+. ++....+|.+.|.+++++..+ .+|++++.|+++++|++...+..
T Consensus 370 SL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~ 449 (775)
T KOG0319|consen 370 SLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAF 449 (775)
T ss_pred eeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccc
Confidence 99977788899999999999999885443 344567899999999997654 57899999999999998762211
Q ss_pred -------EEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCe
Q 020798 151 -------KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223 (321)
Q Consensus 151 -------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~ 223 (321)
.....|...|++++++|+..++++|++|.+.++|+++....... +.+|...+.++.|+|..+.+++++.|++
T Consensus 450 ~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~v-LsGH~RGvw~V~Fs~~dq~laT~SgD~T 528 (775)
T KOG0319|consen 450 PIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGV-LSGHTRGVWCVSFSKNDQLLATCSGDKT 528 (775)
T ss_pred cceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEE-eeCCccceEEEEeccccceeEeccCCce
Confidence 12346899999999999999999999999999999996655444 4577888999999999999999999999
Q ss_pred EEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEE
Q 020798 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 303 (321)
|+||.+.+...++++.+|...+... .|. .+|..|++++.||-+++|++.+..++..+..|.+.|++++.+|...+++
T Consensus 529 vKIW~is~fSClkT~eGH~~aVlra--~F~-~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~ 605 (775)
T KOG0319|consen 529 VKIWSISTFSCLKTFEGHTSAVLRA--SFI-RNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFV 605 (775)
T ss_pred EEEEEeccceeeeeecCccceeEee--eee-eCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeE
Confidence 9999999999999999998775443 333 5799999999999999999999999999999999999999999999999
Q ss_pred EEeecCCccEEEccc
Q 020798 304 SGALDNDRTVKIWTQ 318 (321)
Q Consensus 304 s~~~d~~~~i~iw~~ 318 (321)
||+ +||.|.+|.-
T Consensus 606 tgg--~Dg~i~~wkD 618 (775)
T KOG0319|consen 606 TGG--GDGRIIFWKD 618 (775)
T ss_pred ecC--CCeEEEEeec
Confidence 998 5689999964
No 32
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=9.4e-39 Score=236.11 Aligned_cols=285 Identities=26% Similarity=0.470 Sum_probs=242.3
Q ss_pred eeccCCcccEEEEEECC---CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 17 QTLNGHLRAISSVKFSH---DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~---~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
....||.++|-.++||| +|-+|++++.|+.-.+- .......+-++.+|++.|.+...+.+....++++.
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr--------~g~tgdwigtfeghkgavw~~~l~~na~~aasaaa 79 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLR--------NGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAA 79 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhc--------cCCCCCcEEeeeccCcceeeeecCchhhhhhhhcc
Confidence 34579999999999985 88899999999876543 12234457789999999999999998888899999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-EEEEEeCCCCCeeEEEEccCCCEE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-CLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
|-+-++||.-++..+.++. |.-.|..++|+.|.++|++|+.+..+++||++..+ +...+..|...|..+-|....+.+
T Consensus 80 dftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~i 158 (334)
T KOG0278|consen 80 DFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCI 158 (334)
T ss_pred cchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceE
Confidence 9999999999998777764 88889999999999999999999999999997654 456678899999999999988899
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+++..|++||+||.+++..++.+.. ..+++++.++++|++|.++ ..+.|.+||..+-.+++.+..... +....
T Consensus 159 LSSadd~tVRLWD~rTgt~v~sL~~--~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~n----V~SAS 231 (334)
T KOG0278|consen 159 LSSADDKTVRLWDHRTGTEVQSLEF--NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPCN----VESAS 231 (334)
T ss_pred EeeccCCceEEEEeccCcEEEEEec--CCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCccc----ccccc
Confidence 9999999999999999998888754 4568899999999987664 456799999999888888754322 33333
Q ss_pred EecCCeEEEEeCCCCeEEEEEcccceEEEEe-cCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKL-EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
..|+...+++|+.|..++.||..+++.+..+ ++|.+||.++.|+|+|...|+||+ ||+|+||...
T Consensus 232 L~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSE--DGTirlWQt~ 297 (334)
T KOG0278|consen 232 LHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSE--DGTIRLWQTT 297 (334)
T ss_pred ccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCC--CceEEEEEec
Confidence 3466788999999999999999999988875 899999999999999999999995 5899999864
No 33
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.2e-36 Score=227.94 Aligned_cols=294 Identities=28% Similarity=0.494 Sum_probs=241.7
Q ss_pred ccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCE
Q 020798 8 ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRF 87 (321)
Q Consensus 8 ~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~ 87 (321)
.+++|.+..+ .-...|+++.|+++|..|++++.|..+++||.... ..+..+..++-++..+.|......
T Consensus 2 ~s~~~ak~f~---~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g--------~~~~ti~skkyG~~~~~Fth~~~~ 70 (311)
T KOG1446|consen 2 RSFRPAKVFR---ETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSG--------KQVKTINSKKYGVDLACFTHHSNT 70 (311)
T ss_pred cccccccccc---cCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCC--------ceeeEeecccccccEEEEecCCce
Confidence 3455554333 34568999999999999999999999999987542 334556666778888899877666
Q ss_pred EEEEeC--CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEE
Q 020798 88 LVSASD--DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 88 l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 165 (321)
++.++. |.+|+..++.+++.++.+.||...|..++.+|-++.+++++.|++|++||++..++.-.+.....+ .++|
T Consensus 71 ~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~Af 148 (311)
T KOG1446|consen 71 VIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAF 148 (311)
T ss_pred EEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeE
Confidence 766665 889999999999999999999999999999999999999999999999999988877766554444 4789
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCC--ceeeee--ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTG--HCMKTL--IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~--~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
.|+|-+++++.....|++||++.- .+...+ ........+.+.|+|+|++++.++..+.+++.|.-+|..+..+.++
T Consensus 149 Dp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~ 228 (311)
T KOG1446|consen 149 DPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGY 228 (311)
T ss_pred CCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeec
Confidence 999999999988889999999853 122222 2233456788999999999999999999999999999999998876
Q ss_pred CCce-eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC-CCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 242 TNSK-YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG-HTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 242 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.... ..+.+.+ .||++++++|+.||+|.+|+++++..+..+.+ +..++.++.|+|...++|+++ ..+-+|-.+
T Consensus 229 ~~~~~~~~~a~f-tPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~----s~l~fw~p~ 303 (311)
T KOG1446|consen 229 PNAGNLPLSATF-TPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS----SNLVFWLPD 303 (311)
T ss_pred cCCCCcceeEEE-CCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC----ceEEEEecc
Confidence 6543 2344444 47999999999999999999999999999988 689999999999999999975 468888654
No 34
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=7.1e-38 Score=264.64 Aligned_cols=211 Identities=35% Similarity=0.619 Sum_probs=195.9
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
....++|-||.++|...+|+|+.++|++||+|+++++|.+... ..+-.+.+|..+|.++.|+|-|-++|+++
T Consensus 441 ~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~--------s~~V~y~GH~~PVwdV~F~P~GyYFatas 512 (707)
T KOG0263|consen 441 SGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTW--------SCLVIYKGHLAPVWDVQFAPRGYYFATAS 512 (707)
T ss_pred CceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccc--------eeEEEecCCCcceeeEEecCCceEEEecC
Confidence 3456779999999999999999999999999999999988642 34556789999999999999999999999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
.|++.++|......+++.+.+|-+.+.|+.|+|+.+++++|+.|.++++||+.+|..++.+.+|.++|++++|+|+|++|
T Consensus 513 ~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~L 592 (707)
T KOG0263|consen 513 HDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYL 592 (707)
T ss_pred CCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~ 232 (321)
++|+.||.|.+||+.++..+..+..+ ...+..+.|+.+|..|++++.|++|++||+...
T Consensus 593 aSg~ed~~I~iWDl~~~~~v~~l~~H-t~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 593 ASGDEDGLIKIWDLANGSLVKQLKGH-TGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred eecccCCcEEEEEcCCCcchhhhhcc-cCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 99999999999999999887776654 778999999999999999999999999998653
No 35
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.2e-37 Score=261.33 Aligned_cols=259 Identities=33% Similarity=0.602 Sum_probs=213.5
Q ss_pred eeeeecc-CCcccEEEEEECCCCCEEEEecCCceEEEeeccccC----------------------------C-------
Q 020798 14 TLTQTLN-GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSIS----------------------------N------- 57 (321)
Q Consensus 14 ~~~~~~~-~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~----------------------------~------- 57 (321)
...+.+. +|.+.|.++.|||||+|||+|+.|+.|+||.+..-+ .
T Consensus 257 ~~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~ 336 (712)
T KOG0283|consen 257 TVVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRT 336 (712)
T ss_pred EEeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccc
Confidence 3446667 999999999999999999999999999999876500 0
Q ss_pred -----------------CCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEE
Q 020798 58 -----------------SDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFC 120 (321)
Q Consensus 58 -----------------~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 120 (321)
.-.....|++.+.||.+.|.+|.|+.+ ++|++++.|.+|++|++...+|++.+. |.+.|+|
T Consensus 337 s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 337 SSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTC 414 (712)
T ss_pred cccccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEE
Confidence 000112456778999999999999976 489999999999999999999988765 9999999
Q ss_pred EEECC-CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec---
Q 020798 121 VNFNP-QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI--- 196 (321)
Q Consensus 121 ~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--- 196 (321)
++|+| |.++|++|+-|+.|++|++...+...-... ..-|++++|.|+|+..+.|+.+|.+++|+....+......
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl-~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~ 493 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDL-RDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRL 493 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhh-hhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEee
Confidence 99999 678999999999999999987765554444 4789999999999999999999999999998765543221
Q ss_pred ----cCCCCCeEEEEEccCCC-EEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEE
Q 020798 197 ----DDENPPVSFVKFSPNGK-FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271 (321)
Q Consensus 197 ----~~~~~~~~~~~~~~~g~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~v 271 (321)
......|+.+.|.|... .+++.+.|..|+|||.++.+++..|++.......+.+.|.. ||++|++++.|..|++
T Consensus 494 ~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~-Dgk~IVs~seDs~VYi 572 (712)
T KOG0283|consen 494 HNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSS-DGKHIVSASEDSWVYI 572 (712)
T ss_pred ccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEcc-CCCEEEEeecCceEEE
Confidence 11123689999987543 57778999999999999999999999887776667777765 9999999999999999
Q ss_pred EEccc
Q 020798 272 WELQS 276 (321)
Q Consensus 272 wd~~~ 276 (321)
|++..
T Consensus 573 W~~~~ 577 (712)
T KOG0283|consen 573 WKNDS 577 (712)
T ss_pred EeCCC
Confidence 99844
No 36
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.4e-37 Score=261.25 Aligned_cols=288 Identities=27% Similarity=0.508 Sum_probs=249.9
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRL 99 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~i 99 (321)
+.-...|..++|+|....++++--.|.|.+||.. -...+..|..|+++|+.+.|+|++.++++|++|-.|++
T Consensus 6 EskSsRvKglsFHP~rPwILtslHsG~IQlWDYR--------M~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkV 77 (1202)
T KOG0292|consen 6 ESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYR--------MGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKV 77 (1202)
T ss_pred hcccccccceecCCCCCEEEEeecCceeeeehhh--------hhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEE
Confidence 3445678889999999999999999999999763 23457788999999999999999999999999999999
Q ss_pred EecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC
Q 020798 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179 (321)
Q Consensus 100 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 179 (321)
|+....+++.++.+|-++|..+.|++.--++++++.|.+|++|+.++++++..+.+|...|++..|+|....+++++-|.
T Consensus 78 WnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQ 157 (1202)
T KOG0292|consen 78 WNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQ 157 (1202)
T ss_pred EecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCc----------------------------eeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 020798 180 LCRIWDASTGH----------------------------CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 180 ~i~~~d~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~ 231 (321)
+||+||+..-+ .++.+..+|...|+.++|+|.-..+++|+.|..|++|.+..
T Consensus 158 TVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne 237 (1202)
T KOG0292|consen 158 TVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 237 (1202)
T ss_pred eEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc
Confidence 99999974210 12234456777899999999999999999999999999876
Q ss_pred CcE--EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecC
Q 020798 232 GKI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 232 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
.+. +.+..+|.+.+.+ ..+.+...++++.++|++|||||+..+..++.++...++-+.++-||..+++|.|.
T Consensus 238 tKaWEvDtcrgH~nnVss---vlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgH--- 311 (1202)
T KOG0292|consen 238 TKAWEVDTCRGHYNNVSS---VLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGH--- 311 (1202)
T ss_pred ccceeehhhhcccCCcce---EEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeec---
Confidence 553 4456678777554 34457788999999999999999999999999887778899999999999999985
Q ss_pred CccEEEcccccC
Q 020798 310 DRTVKIWTQEKE 321 (321)
Q Consensus 310 ~~~i~iw~~~~~ 321 (321)
|+-+.+|.++.|
T Consensus 312 DsGm~VFkleRE 323 (1202)
T KOG0292|consen 312 DSGMIVFKLERE 323 (1202)
T ss_pred CCceEEEEEccc
Confidence 344667766643
No 37
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=9e-38 Score=242.11 Aligned_cols=253 Identities=30% Similarity=0.527 Sum_probs=224.6
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
..+.+.+|..+|..+.|+|+-..+++++.|.+|++||..++++...+++|...+..+.|+..|+++++++.|-.+++||.
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~ 179 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDF 179 (406)
T ss_pred chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeH
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCe
Q 020798 145 KT-GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223 (321)
Q Consensus 145 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~ 223 (321)
.+ .++++.+..|+..|.+++|-|.|.++++++.|.+|+.|++.++.++..+.. +..-+..++.+.||..+++++.|.+
T Consensus 180 ~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~-h~ewvr~v~v~~DGti~As~s~dqt 258 (406)
T KOG0295|consen 180 DTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPG-HSEWVRMVRVNQDGTIIASCSNDQT 258 (406)
T ss_pred HHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccC-chHhEEEEEecCCeeEEEecCCCce
Confidence 76 456677788999999999999999999999999999999999999988754 4457888999999999999999999
Q ss_pred EEEEeCCCCcEEEEEeccCCceeEEEeEEEe------------cCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeE
Q 020798 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSV------------TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~ 291 (321)
+++|-+.+++....+..|..++-|+...... ..++++.+++.|++|++||+.++.++.++.+|.+.|.
T Consensus 259 l~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr 338 (406)
T KOG0295|consen 259 LRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVR 338 (406)
T ss_pred EEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceee
Confidence 9999999987666677777666665443110 1246999999999999999999999999999999999
Q ss_pred EEEecCCCceEEEEeecCCccEEEccccc
Q 020798 292 SVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 292 ~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+++|+|.|++|+++. +|+++++||++.
T Consensus 339 ~~af~p~Gkyi~Sca--DDktlrvwdl~~ 365 (406)
T KOG0295|consen 339 GVAFSPGGKYILSCA--DDKTLRVWDLKN 365 (406)
T ss_pred eeEEcCCCeEEEEEe--cCCcEEEEEecc
Confidence 999999999999997 468999999875
No 38
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=100.00 E-value=4.9e-37 Score=233.79 Aligned_cols=300 Identities=26% Similarity=0.502 Sum_probs=241.4
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCC---------CCCC-CcccccccccccEEEEEECCCCC
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSD---------STPP-SPLQKFTGHEQGVSDLVFSSDSR 86 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~---------~~~~-~~~~~~~~h~~~i~~~~~~~~~~ 86 (321)
..+..|+.++.+.+|||||.++|+|+.|..|++.|++++.... .... ..++++-.|...|+++.|+|...
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 4567899999999999999999999999999999998543211 1111 23567778999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCcceeeee--ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE---eCCCCCee
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKTL--IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL---PAHSDPVT 161 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~---~~~~~~v~ 161 (321)
.|++|+.|++|+++|+.+....+.+ ......+.++.|+|.|.+|+.|....++++||+++.++...- ..|.+.|+
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~ 265 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAIT 265 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccccccee
Confidence 9999999999999999765433322 224567999999999999999999999999999988765432 46888999
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCC-CCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 020798 162 AVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN-PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 240 (321)
++.+++.+++.++++.||.|++||--+++|+..+...|+ ..|.+..|..+|+++++.+.|..+++|.+.+++.+..+.+
T Consensus 266 ~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtG 345 (430)
T KOG0640|consen 266 QVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTG 345 (430)
T ss_pred EEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEec
Confidence 999999999999999999999999988999888766554 5688899999999999999999999999999999999976
Q ss_pred cCCce---eEEEeEEEecCCeEEEEe-CCCCeEEEEEcccceEEEEe-cCCCCCeEEEEecCCCceEEEEeecCCccEEE
Q 020798 241 HTNSK---YCISSTFSVTNGKYIVSG-SEDSCVYLWELQSRKVVQKL-EGHTDPVISVASHPTENIIASGALDNDRTVKI 315 (321)
Q Consensus 241 ~~~~~---~~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~i 315 (321)
..... ......|. ....+++.- -..+.+.-||.++...+..+ -+|.++++.+..+|.+.-+.++|. |-++++
T Consensus 346 Ag~tgrq~~rtqAvFN-htEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsd--D~raRF 422 (430)
T KOG0640|consen 346 AGTTGRQKHRTQAVFN-HTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSD--DFRARF 422 (430)
T ss_pred CCcccchhhhhhhhhc-CccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecc--cceeee
Confidence 52111 11112233 334555443 34567899999887554433 479999999999999999999984 578999
Q ss_pred cccc
Q 020798 316 WTQE 319 (321)
Q Consensus 316 w~~~ 319 (321)
|.-.
T Consensus 423 Wyrr 426 (430)
T KOG0640|consen 423 WYRR 426 (430)
T ss_pred eeec
Confidence 9643
No 39
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=1.4e-35 Score=240.10 Aligned_cols=298 Identities=19% Similarity=0.357 Sum_probs=248.4
Q ss_pred CCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE
Q 020798 10 FRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV 89 (321)
Q Consensus 10 ~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~ 89 (321)
++.......+.+|..+++...|||.|.|+|+|...|.|+||+....+. ....+++.-.++|.+|+|+.++++|+
T Consensus 46 i~~~~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~h------iLKnef~v~aG~I~Di~Wd~ds~RI~ 119 (603)
T KOG0318|consen 46 IDNPASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEH------ILKNEFQVLAGPIKDISWDFDSKRIA 119 (603)
T ss_pred CCCccceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcce------eeeeeeeecccccccceeCCCCcEEE
Confidence 334445677889999999999999999999999999999998754211 11223444568899999999999988
Q ss_pred EEeCC----CcEEEEecCCcceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 90 SASDD----KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 90 ~~~~d----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
+.+.. |.+.+|| ++...-.+.+|+..+.+++|-|..- ++++|+.|+.|.+|+-..-+-...+..|..-|.++.
T Consensus 120 avGEGrerfg~~F~~D--SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VR 197 (603)
T KOG0318|consen 120 AVGEGRERFGHVFLWD--SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVR 197 (603)
T ss_pred EEecCccceeEEEEec--CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEE
Confidence 76543 2455565 5666778899999999999998654 599999999999998766666667788999999999
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeec--cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 242 (321)
|+|||++|++++.||.+.+||-.+++.+..+. ..|...|..++|+||++.+++++.|.+++|||+.+.++++++....
T Consensus 198 ysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~ 277 (603)
T KOG0318|consen 198 YSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGS 277 (603)
T ss_pred ECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCC
Confidence 99999999999999999999999998877764 2466789999999999999999999999999999999999886543
Q ss_pred C-ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 243 N-SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 243 ~-~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
. ....+.+.|. ...|++-+.+|.|.+++......++.+.||...|++++.+|++.+|.+|+.| |.|.-|+...
T Consensus 278 ~v~dqqvG~lWq---kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyD--G~I~~W~~~~ 351 (603)
T KOG0318|consen 278 TVEDQQVGCLWQ---KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYD--GHINSWDSGS 351 (603)
T ss_pred chhceEEEEEEe---CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccC--ceEEEEecCC
Confidence 2 2344555553 5578899999999999999999999999999999999999999999999965 8999999754
No 40
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=1.8e-38 Score=245.04 Aligned_cols=271 Identities=30% Similarity=0.524 Sum_probs=229.1
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
...+|+|+.+. ...+++|..|++|++||... ...+..+.||++.|.|+.|. .+.+++|+.|.+|++||
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~--------~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWD 263 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNS--------LECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWD 263 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEecccc--------HHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEe
Confidence 45789999985 56799999999999998754 34567889999999999985 56899999999999999
Q ss_pred cCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE---EEEEEeCCCCCeeEEEEccCCCEEEEEeCC
Q 020798 102 VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK---CLKVLPAHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
+.++++++.+.+|.+.|..+.|+ ++++++++.|.++.+||+.+.. +...+.+|...|..+.|+ .+++++++.|
T Consensus 264 v~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgD 339 (499)
T KOG0281|consen 264 VNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGD 339 (499)
T ss_pred ccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCC
Confidence 99999999999999999999997 4699999999999999997654 334567899999999986 4599999999
Q ss_pred CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe
Q 020798 179 GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (321)
.+|++|+..++++++.+. .+...|.++.+ .|+++++|++|.+|++||+..|..++.+++|...+.|+.+ |.+
T Consensus 340 RTikvW~~st~efvRtl~-gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF-----d~k 411 (499)
T KOG0281|consen 340 RTIKVWSTSTCEFVRTLN-GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-----DNK 411 (499)
T ss_pred ceEEEEeccceeeehhhh-cccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee-----cCc
Confidence 999999999999887764 55666766655 7889999999999999999999999999999988777653 578
Q ss_pred EEEEeCCCCeEEEEEcccceE---------EEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 259 YIVSGSEDSCVYLWELQSRKV---------VQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 259 ~l~~~~~dg~i~vwd~~~~~~---------~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.+++|+.||+|+|||+..... +..+..|.+.|..+.| |...+++++ .|.+|.|||...
T Consensus 412 rIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsss--HddtILiWdFl~ 478 (499)
T KOG0281|consen 412 RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSS--HDDTILIWDFLN 478 (499)
T ss_pred eeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEecc--CCCeEEEEEcCC
Confidence 899999999999999976532 3344568899999999 466777777 457899999753
No 41
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=1.2e-35 Score=220.79 Aligned_cols=300 Identities=23% Similarity=0.392 Sum_probs=245.3
Q ss_pred ccccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-
Q 020798 6 SLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD- 84 (321)
Q Consensus 6 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~- 84 (321)
.+..++.+. .+.+.+|...|.+++|+-+|..|++|+.|+++.+|.+..... .......+|.+.|-.++|+|.
T Consensus 4 t~~~~~~l~-~r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~------~~~~~~~gh~~svdql~w~~~~ 76 (313)
T KOG1407|consen 4 TLPKFKSLK-RRELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRF------RKELVYRGHTDSVDQLCWDPKH 76 (313)
T ss_pred cccchhhhh-hHHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhh------hhhhcccCCCcchhhheeCCCC
Confidence 334444333 377889999999999999999999999999999998875421 223345789999999999985
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
...|++++.|..|++||++.+++...+....+. ..+.|+|+|++++.++.|..|...|.++.+.+...+ ....+.-+.
T Consensus 77 ~d~~atas~dk~ir~wd~r~~k~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~ 154 (313)
T KOG1407|consen 77 PDLFATASGDKTIRIWDIRSGKCTARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEIS 154 (313)
T ss_pred CcceEEecCCceEEEEEeccCcEEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeee
Confidence 568999999999999999999988777654444 457899999999999999999999999887666543 234567788
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 244 (321)
|+.++.+|+.....|.|.+.....-+.+..+ ..|.....++.|+|+|+++++|+.|..+.+||+...-.++.+..+.-+
T Consensus 155 w~~~nd~Fflt~GlG~v~ILsypsLkpv~si-~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwp 233 (313)
T KOG1407|consen 155 WNNSNDLFFLTNGLGCVEILSYPSLKPVQSI-KAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWP 233 (313)
T ss_pred ecCCCCEEEEecCCceEEEEecccccccccc-ccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCc
Confidence 9888888888888899999888776666665 355666788999999999999999999999999887777888766555
Q ss_pred eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCc-------cEEEcc
Q 020798 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR-------TVKIWT 317 (321)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~-------~i~iw~ 317 (321)
+..+ .+..+|++||+|++|..|-|=++++|..+.+++ +.++...|+|||...+||-++.|.|+ .|||+-
T Consensus 234 VRTl---SFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG 309 (313)
T KOG1407|consen 234 VRTL---SFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFG 309 (313)
T ss_pred eEEE---EeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecCCCCccccccceeEEec
Confidence 4433 344789999999999999999999999998886 67889999999999999999877654 788886
Q ss_pred cc
Q 020798 318 QE 319 (321)
Q Consensus 318 ~~ 319 (321)
+.
T Consensus 310 ~~ 311 (313)
T KOG1407|consen 310 LS 311 (313)
T ss_pred CC
Confidence 54
No 42
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=3e-36 Score=234.91 Aligned_cols=280 Identities=32% Similarity=0.516 Sum_probs=233.7
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC---CCEEEEEeCCCcE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD---SRFLVSASDDKTI 97 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~---~~~l~~~~~d~~i 97 (321)
-|..-|+++... ++.+++|++||.+++|+..+ .....+.+|.++|.+++|.-. ...|++++.|.++
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G---------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl 171 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG---------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTL 171 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecCC---------ceEEEEecCCcceeeeEEEecCCccceEEEecCCceE
Confidence 488889888877 78999999999999998764 345678899999998887532 3469999999999
Q ss_pred EEEecCCcce----eeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC-------------------------CCE
Q 020798 98 RLWDVPTATC----LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK-------------------------TGK 148 (321)
Q Consensus 98 ~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~-------------------------~~~ 148 (321)
++|.++.+.. ++...||...|-++...+++..+++|+.|.+|++|+.. .+.
T Consensus 172 ~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~ 251 (423)
T KOG0313|consen 172 RLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRT 251 (423)
T ss_pred EEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccC
Confidence 9998876643 33446999999999999999999999999999999831 112
Q ss_pred EEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
++..+.+|..+|.++.|++ ...+++++.|.+|+.||+.++.+...+.. +....++.++|..++|++|+.|..|++||
T Consensus 252 P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~--~ksl~~i~~~~~~~Ll~~gssdr~irl~D 328 (423)
T KOG0313|consen 252 PLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT--NKSLNCISYSPLSKLLASGSSDRHIRLWD 328 (423)
T ss_pred ceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec--CcceeEeecccccceeeecCCCCceeecC
Confidence 4456788999999999998 66899999999999999999987776643 45688999999999999999999999999
Q ss_pred CCCCc---EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce-EEEEecCCCCCeEEEEecCCCceEEE
Q 020798 229 YSTGK---ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK-VVQKLEGHTDPVISVASHPTENIIAS 304 (321)
Q Consensus 229 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~s 304 (321)
.+++. ...++.+|.+-+. +..+++.+..+|++|+.|+++++||+++.+ .+..+.+|.+.|.++.|+ ++..+++
T Consensus 329 PR~~~gs~v~~s~~gH~nwVs--svkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvS 405 (423)
T KOG0313|consen 329 PRTGDGSVVSQSLIGHKNWVS--SVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVS 405 (423)
T ss_pred CCCCCCceeEEeeecchhhhh--heecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEe
Confidence 98753 4567888877443 345666677889999999999999999987 899999999999999997 6679999
Q ss_pred EeecCCccEEEcccc
Q 020798 305 GALDNDRTVKIWTQE 319 (321)
Q Consensus 305 ~~~d~~~~i~iw~~~ 319 (321)
||.| ..|+|+...
T Consensus 406 GGaD--~~l~i~~~~ 418 (423)
T KOG0313|consen 406 GGAD--NKLRIFKGS 418 (423)
T ss_pred ccCc--ceEEEeccc
Confidence 9965 679988653
No 43
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3e-36 Score=252.86 Aligned_cols=299 Identities=23% Similarity=0.475 Sum_probs=246.7
Q ss_pred eeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCC-----------------------------------
Q 020798 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDS----------------------------------- 60 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~----------------------------------- 60 (321)
...+++|...|++++|++|+..+++++.|..+.+||+........
T Consensus 185 l~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~ 264 (775)
T KOG0319|consen 185 LHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQY 264 (775)
T ss_pred HHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEE
Confidence 456789999999999999999999999999999998744320000
Q ss_pred -------------CC-C--------------------------------CcccccccccccEEEEEEC-CCCCEEEEEeC
Q 020798 61 -------------TP-P--------------------------------SPLQKFTGHEQGVSDLVFS-SDSRFLVSASD 93 (321)
Q Consensus 61 -------------~~-~--------------------------------~~~~~~~~h~~~i~~~~~~-~~~~~l~~~~~ 93 (321)
.+ . .+...+-|..+.|.+++|- |+.++|+.+++
T Consensus 265 ~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATN 344 (775)
T KOG0319|consen 265 WDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATN 344 (775)
T ss_pred EecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeC
Confidence 00 0 0011223445567888774 67789999999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE----EEEEEeCCCCCeeEEEEccCC
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK----CLKVLPAHSDPVTAVDFNRDG 169 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~v~~~~~~~~~ 169 (321)
.+.+++|+..+..+. .+.+|.+.|.++....+|.+|++|+.|.++++|.++++. ++....+|...|.+++++..+
T Consensus 345 s~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~ 423 (775)
T KOG0319|consen 345 SPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLG 423 (775)
T ss_pred CCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccC
Confidence 999999999888775 778999999999977778899999999999999884432 344557899999999997654
Q ss_pred -CEEEEEeCCCeEEEEeCCCCcee--------eeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 020798 170 -TMIVTSSYDGLCRIWDASTGHCM--------KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 170 -~~l~~~~~dg~i~~~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 240 (321)
.+|++++.|+++++|++...+.. +.....|...|++++++|+.+.+++|+.|.+.+||++.....+..+.+
T Consensus 424 asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG 503 (775)
T KOG0319|consen 424 ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG 503 (775)
T ss_pred ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC
Confidence 48899999999999999752211 112235677899999999999999999999999999999999999999
Q ss_pred cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
|....+++.+. +..+.+||++.|++|+||.+.+..+++++.||...|..+.|-.++..|++++ .||.||||+.++
T Consensus 504 H~RGvw~V~Fs---~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~--adGliKlWnikt 578 (775)
T KOG0319|consen 504 HTRGVWCVSFS---KNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAG--ADGLIKLWNIKT 578 (775)
T ss_pred CccceEEEEec---cccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEecc--CCCcEEEEeccc
Confidence 99998887654 6678999999999999999999999999999999999999999999999998 458999999875
No 44
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.8e-36 Score=248.10 Aligned_cols=281 Identities=23% Similarity=0.419 Sum_probs=246.6
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
++.+.+..|...|.++.|+|....++++-..|.+.||+.++. ..+..+.-.+-+|++..|-+..+++++|++
T Consensus 4 ~~krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetq--------tmVksfeV~~~PvRa~kfiaRknWiv~GsD 75 (794)
T KOG0276|consen 4 DFKRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQ--------TMVKSFEVSEVPVRAAKFIARKNWIVTGSD 75 (794)
T ss_pred hhhhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccc--------eeeeeeeecccchhhheeeeccceEEEecC
Confidence 345566779999999999999999999999999999987542 223445555678889999999999999999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccC-CCE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRD-GTM 171 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~ 171 (321)
|..|++|+..+.+.++.+.+|.+.|.+++.+|..-++++++.|-+|++||.+.+ .+.+++.+|..-|++++|+|. .+.
T Consensus 76 D~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~nt 155 (794)
T KOG0276|consen 76 DMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNT 155 (794)
T ss_pred CceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccc
Confidence 999999999999999999999999999999999999999999999999998765 577889999999999999995 568
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC--CEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG--KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
+++++-|++|++|.+.+..+..++. .|...|+++.+-+.| .+|++|+.|..++|||.++...++++.+|...+.
T Consensus 156 FaS~sLDrTVKVWslgs~~~nfTl~-gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs--- 231 (794)
T KOG0276|consen 156 FASASLDRTVKVWSLGSPHPNFTLE-GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVS--- 231 (794)
T ss_pred eeeeeccccEEEEEcCCCCCceeee-ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccce---
Confidence 9999999999999998887777764 677889999998754 6899999999999999999999999999988754
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
..++.|.-..+++|++||++|+|+..+-++...+.-..++|++++-.+..+.++.|.
T Consensus 232 ~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~ 288 (794)
T KOG0276|consen 232 FVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGF 288 (794)
T ss_pred EEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEec
Confidence 344557788999999999999999999888888877778999999999888888875
No 45
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=1.1e-35 Score=225.13 Aligned_cols=250 Identities=26% Similarity=0.497 Sum_probs=214.0
Q ss_pred CCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC-cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEE
Q 020798 63 PSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT-ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141 (321)
Q Consensus 63 ~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 141 (321)
..|+..+.+|++.|+.+.|+|+|..|++|+.|..|.+|++.. .+....+.+|+++|..+.|.+|++.+++++.|.+++.
T Consensus 37 ~ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~ 116 (338)
T KOG0265|consen 37 QAPIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRG 116 (338)
T ss_pred cchhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEE
Confidence 446677889999999999999999999999999999999643 3445567899999999999999999999999999999
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL 220 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 220 (321)
||.++|+.+..++.|..-+.++.-+.-|. ++.+++.|+++++||.++..+++.+. ....+..+.|..++..+.+|+-
T Consensus 117 wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~--~kyqltAv~f~d~s~qv~sggI 194 (338)
T KOG0265|consen 117 WDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE--NKYQLTAVGFKDTSDQVISGGI 194 (338)
T ss_pred EecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc--cceeEEEEEecccccceeeccc
Confidence 99999999999999999999888544454 56678899999999999877766552 3456889999999999999999
Q ss_pred CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc----ceEEEEecCCC----CCeEE
Q 020798 221 DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS----RKVVQKLEGHT----DPVIS 292 (321)
Q Consensus 221 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~h~----~~v~~ 292 (321)
|+.|++||++....+..+.+|..++.. .+..++|.++.+-+-|.++++||++. .+++..+.+|. .....
T Consensus 195 dn~ikvWd~r~~d~~~~lsGh~DtIt~---lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~ 271 (338)
T KOG0265|consen 195 DNDIKVWDLRKNDGLYTLSGHADTITG---LSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLK 271 (338)
T ss_pred cCceeeeccccCcceEEeecccCceee---EEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcce
Confidence 999999999999999999999887544 44457899999999999999999964 34566677653 24678
Q ss_pred EEecCCCceEEEEeecCCccEEEcccc
Q 020798 293 VASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 293 ~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
++|+|+++.+..|+.| +.+++||..
T Consensus 272 cswsp~~~~i~ags~d--r~vyvwd~~ 296 (338)
T KOG0265|consen 272 CSWSPNGTKITAGSAD--RFVYVWDTT 296 (338)
T ss_pred eeccCCCCcccccccc--ceEEEeecc
Confidence 8999999999999954 899999964
No 46
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=3.2e-35 Score=253.04 Aligned_cols=244 Identities=38% Similarity=0.651 Sum_probs=217.0
Q ss_pred ccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc--eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec-CCCE
Q 020798 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT--CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV-KTGK 148 (321)
Q Consensus 72 h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~-~~~~ 148 (321)
|...|.++.|+++|+++++++.++.+++|+....+ ....+.+|...|..++|+|++.++++++.|++|++||+ ..+.
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~ 237 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGR 237 (456)
T ss_pred ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCe
Confidence 37889999999999999999999999999997776 66777899999999999999999999999999999999 5558
Q ss_pred EEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
.++++.+|...|++++|+|+++.+++|+.|++|++||++++++...+. .+...+..++|++++++|++++.|+.|++||
T Consensus 238 ~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~-~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd 316 (456)
T KOG0266|consen 238 NLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLK-GHSDGISGLAFSPDGNLLVSASYDGTIRVWD 316 (456)
T ss_pred EEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeee-ccCCceEEEEECCCCCEEEEcCCCccEEEEE
Confidence 899999999999999999999999999999999999999988777664 5566899999999999999999999999999
Q ss_pred CCCCc--EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCC---eEEEEecCCCceEE
Q 020798 229 YSTGK--ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDP---VISVASHPTENIIA 303 (321)
Q Consensus 229 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~---v~~~~~~p~~~~l~ 303 (321)
+.++. ....+..+.... .+......+++.++++++.|+.+++||+..+..+..+.+|... +.+...++.+.++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (456)
T KOG0266|consen 317 LETGSKLCLKLLSGAENSA-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIY 395 (456)
T ss_pred CCCCceeeeecccCCCCCC-ceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEE
Confidence 99998 567777766654 5666666789999999999999999999999999999998774 44455678899999
Q ss_pred EEeecCCccEEEcccc
Q 020798 304 SGALDNDRTVKIWTQE 319 (321)
Q Consensus 304 s~~~d~~~~i~iw~~~ 319 (321)
+|+. |+.|++|+.+
T Consensus 396 sg~~--d~~v~~~~~~ 409 (456)
T KOG0266|consen 396 SGSE--DGSVYVWDSS 409 (456)
T ss_pred EEeC--CceEEEEeCC
Confidence 9995 5899999986
No 47
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=100.00 E-value=1.3e-35 Score=239.78 Aligned_cols=308 Identities=24% Similarity=0.409 Sum_probs=238.9
Q ss_pred ccccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC
Q 020798 6 SLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS 85 (321)
Q Consensus 6 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~ 85 (321)
.+....|+.....+++|...|+++++.|.|-.|++|+.|..|++||+.++...... ...++.... ..|+++.|++.|
T Consensus 150 ~~~~~IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~-fr~l~P~E~--h~i~sl~ys~Tg 226 (641)
T KOG0772|consen 150 SIIKLIPGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRS-FRQLQPCET--HQINSLQYSVTG 226 (641)
T ss_pred chhhcCCccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchh-hhccCcccc--cccceeeecCCC
Confidence 34455688888889999999999999999999999999999999999887643322 223333333 458999999999
Q ss_pred CEEEEEeCCCcEEEEecCCcceee------------eeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEE-EE
Q 020798 86 RFLVSASDDKTIRLWDVPTATCLK------------TLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKC-LK 151 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~~------------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~-~~ 151 (321)
..|++.+...+.+++|-...+... ..+||...++|.+|+|.. +.|++++.||++++||+...+. .+
T Consensus 227 ~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~q 306 (641)
T KOG0772|consen 227 DQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQ 306 (641)
T ss_pred CeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhhee
Confidence 999988888899999976554332 236899999999999976 4689999999999999976542 22
Q ss_pred EEe-----CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCc--eeeeeccCCCC--CeEEEEEccCCCEEEEEecCC
Q 020798 152 VLP-----AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH--CMKTLIDDENP--PVSFVKFSPNGKFILVGTLDN 222 (321)
Q Consensus 152 ~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~d~ 222 (321)
.++ ...-++++++|+|++..+++|..||.|.+|+..+.. ....+...|.. .|+++.|+++|++|++-+.|+
T Consensus 307 Vik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~ 386 (641)
T KOG0772|consen 307 VIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDD 386 (641)
T ss_pred EEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCC
Confidence 332 223468999999999999999999999999975432 22233344444 799999999999999999999
Q ss_pred eEEEEeCCCCc-EEEEEeccCCceeEEEeEEEecCCeEEEEeCC------CCeEEEEEcccceEEEEecCCCCCeEEEEe
Q 020798 223 TLRLWNYSTGK-ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE------DSCVYLWELQSRKVVQKLEGHTDPVISVAS 295 (321)
Q Consensus 223 ~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 295 (321)
++++||++..+ ++....+....-....++| +|+.+++++|++ .|.+.+||..+...++++.-....|..+.|
T Consensus 387 tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~F-SPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~W 465 (641)
T KOG0772|consen 387 TLKVWDLRQFKKPLNVRTGLPTPFPGTDCCF-SPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLW 465 (641)
T ss_pred ceeeeeccccccchhhhcCCCccCCCCcccc-CCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEee
Confidence 99999998753 4444443322222223344 478889998863 578999999999989888877889999999
Q ss_pred cCCCceEEEEeecCCccEEEcccc
Q 020798 296 HPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 296 ~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
||.-+.+..|+ +||.+++|--.
T Consensus 466 hpkLNQi~~gs--gdG~~~vyYdp 487 (641)
T KOG0772|consen 466 HPKLNQIFAGS--GDGTAHVYYDP 487 (641)
T ss_pred cchhhheeeec--CCCceEEEECc
Confidence 99998888887 45888887543
No 48
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=2.9e-37 Score=242.57 Aligned_cols=247 Identities=26% Similarity=0.476 Sum_probs=211.3
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccccc-ccEEEEEECCCCCEEEEEeC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHE-QGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~~~~~~~l~~~~~ 93 (321)
+...++.|..+|+++.|+++|.++++|+.+|.|++|+..- ..+..+..|. ..|++++|+|+...+++++.
T Consensus 130 FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm---------nnVk~~~ahh~eaIRdlafSpnDskF~t~Sd 200 (464)
T KOG0284|consen 130 FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM---------NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSD 200 (464)
T ss_pred HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch---------hhhHHhhHhhhhhhheeccCCCCceeEEecC
Confidence 4455789999999999999999999999999999996532 2234445554 89999999999999999999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
||+|+|||....+....+.+|.-.|.+++|+|....+++++.|..|++||.+++.++.++..|+..|..+.|+|++++|+
T Consensus 201 Dg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Ll 280 (464)
T KOG0284|consen 201 DGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLL 280 (464)
T ss_pred CCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeE
Confidence 99999999988888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEE-eccCCceeEEEeE
Q 020798 174 TSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTY-TGHTNSKYCISST 251 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~ 251 (321)
+++.|..++++|+++-+.+..+ ..+...+..+.|+| ...+|.+|+.||.|..|.+...+++..+ ..|...+ ...
T Consensus 281 t~skD~~~kv~DiR~mkEl~~~-r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~i---wsl 356 (464)
T KOG0284|consen 281 TGSKDQSCKVFDIRTMKELFTY-RGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEI---WSL 356 (464)
T ss_pred EccCCceEEEEehhHhHHHHHh-hcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccce---eee
Confidence 9999999999999965544443 34667789999999 4567788999999999998855555544 3454444 344
Q ss_pred EEecCCeEEEEeCCCCeEEEEEc
Q 020798 252 FSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
.+.|-|..|++|+.|.++++|.-
T Consensus 357 ~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 357 AYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred eccccceeEeecCCCcceeeecc
Confidence 45577999999999999999975
No 49
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=4.6e-35 Score=246.30 Aligned_cols=287 Identities=23% Similarity=0.460 Sum_probs=246.1
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
-.+.||...|.++++|.+...+++|+ .+.+++|+.... ..+++++ .+.+.+..|.|.++++++|...|.
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~--------kciRTi~--~~y~l~~~Fvpgd~~Iv~G~k~Ge 435 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTL--------KCIRTIT--CGYILASKFVPGDRYIVLGTKNGE 435 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCc--------ceeEEec--cccEEEEEecCCCceEEEeccCCc
Confidence 34579999999999999988888876 678999976532 3344444 347889999999999999999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC-----CEEEEEEe-------CCCCCeeEEE
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT-----GKCLKVLP-------AHSDPVTAVD 164 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~-----~~~~~~~~-------~~~~~v~~~~ 164 (321)
+.+||+.+...+..+.+|.+.++.++.+||+..+++|+.|.+|++||..- +...+.+. .-...|.+++
T Consensus 436 l~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~ 515 (888)
T KOG0306|consen 436 LQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVS 515 (888)
T ss_pred eEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEE
Confidence 99999999988888999999999999999999999999999999999631 21111111 1246789999
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 244 (321)
++||+++|+++--|+++++|-+.+-+....++ +|.-||.++.++||++.+++|+.|.+|++|-+.-|..-+++-+|+..
T Consensus 516 ~Spdgk~LaVsLLdnTVkVyflDtlKFflsLY-GHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDS 594 (888)
T KOG0306|consen 516 VSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLY-GHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDS 594 (888)
T ss_pred EcCCCcEEEEEeccCeEEEEEecceeeeeeec-ccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCc
Confidence 99999999999999999999998877666665 46678999999999999999999999999999999999999999888
Q ss_pred eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
++++.++ |....+.+++.|+.|+-||....+.+..+.+|...|++++.+|+|.+++++| .|.+|++|....
T Consensus 595 vm~V~F~---P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~s--hD~sIRlwE~td 665 (888)
T KOG0306|consen 595 VMSVQFL---PKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSS--HDKSIRLWERTD 665 (888)
T ss_pred eeEEEEc---ccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEecc--CCceeEeeeccC
Confidence 7766443 5778889999999999999999999999999999999999999999999999 457899998754
No 50
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-35 Score=243.84 Aligned_cols=249 Identities=27% Similarity=0.484 Sum_probs=227.6
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT 146 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 146 (321)
+.+..++..|.++.++|...+++++-.+|.|.|||.++...++++.-...+|.+..|-+..+++++|+.|..|++|+..+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEeccc
Confidence 44556889999999999999999999999999999999999999888888999999999999999999999999999999
Q ss_pred CEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEE
Q 020798 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLR 225 (321)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~ 225 (321)
++.+..+..|.+-|.+++.+|...++++++.|-+|++||-...-.....+.+|...|..++|+| |.+.+++++-|++|+
T Consensus 87 ~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVK 166 (794)
T KOG0276|consen 87 GEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVK 166 (794)
T ss_pred ceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEE
Confidence 9999999999999999999999999999999999999999876555555667778899999999 567899999999999
Q ss_pred EEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 226 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
+|.+....+..++.+|...+.|+.. +...|..+|++|+.|.+|+|||.++..++++++||.+.|..+.|+|.-.++++|
T Consensus 167 VWslgs~~~nfTl~gHekGVN~Vdy-y~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisg 245 (794)
T KOG0276|consen 167 VWSLGSPHPNFTLEGHEKGVNCVDY-YTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISG 245 (794)
T ss_pred EEEcCCCCCceeeeccccCcceEEe-ccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEe
Confidence 9999999999999999998888754 233456799999999999999999999999999999999999999999999999
Q ss_pred eecCCccEEEccc
Q 020798 306 ALDNDRTVKIWTQ 318 (321)
Q Consensus 306 ~~d~~~~i~iw~~ 318 (321)
|+ ||++|||+.
T Consensus 246 sE--DGTvriWhs 256 (794)
T KOG0276|consen 246 SE--DGTVRIWNS 256 (794)
T ss_pred cC--CccEEEecC
Confidence 95 589999985
No 51
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.7e-35 Score=214.76 Aligned_cols=247 Identities=24% Similarity=0.462 Sum_probs=213.4
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
.+..+..|+++|..+.|+-+|++.++++.|.+|++|+...+.+++++.+|...|..++.+.|+..|++|+.|..+.+||+
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence 34566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCC--ceeeeeccCCCCCeEEEEEccCCCEEEEEecCC
Q 020798 145 KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG--HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN 222 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~ 222 (321)
.+|+....+..|...|..+.|+.+...+++|+.|..+++||-++. ++++. +......+.++.. .+..|++|+.||
T Consensus 89 ~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQi-ldea~D~V~Si~v--~~heIvaGS~DG 165 (307)
T KOG0316|consen 89 NTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQI-LDEAKDGVSSIDV--AEHEIVAGSVDG 165 (307)
T ss_pred ccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccch-hhhhcCceeEEEe--cccEEEeeccCC
Confidence 999999999999999999999999999999999999999999764 33333 3334445666666 455799999999
Q ss_pred eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCe--EEEEecCCCc
Q 020798 223 TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV--ISVASHPTEN 300 (321)
Q Consensus 223 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~p~~~ 300 (321)
+++.||++.|.+...+.++. +.++. ..++++..++++-|+++++.|-.++++++.+++|.+.= ...+++....
T Consensus 166 tvRtydiR~G~l~sDy~g~p--it~vs---~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdt 240 (307)
T KOG0316|consen 166 TVRTYDIRKGTLSSDYFGHP--ITSVS---FSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDT 240 (307)
T ss_pred cEEEEEeecceeehhhcCCc--ceeEE---ecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccce
Confidence 99999999998887776653 33332 34789999999999999999999999999999997643 4566777788
Q ss_pred eEEEEeecCCccEEEcccccC
Q 020798 301 IIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~~~ 321 (321)
++++||+ ||.|++||+..+
T Consensus 241 hV~sgSE--DG~Vy~wdLvd~ 259 (307)
T KOG0316|consen 241 HVFSGSE--DGKVYFWDLVDE 259 (307)
T ss_pred eEEeccC--CceEEEEEeccc
Confidence 9999995 589999998653
No 52
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=100.00 E-value=7.7e-36 Score=234.91 Aligned_cols=294 Identities=23% Similarity=0.435 Sum_probs=244.5
Q ss_pred CcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE
Q 020798 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 11 ~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~ 90 (321)
.|-.....+..|.+.|..+.|-++...|++|+.|..|++|++.... ......+.+..++|.++.|.++++++++
T Consensus 163 lpS~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k------~~~~~tLaGs~g~it~~d~d~~~~~~iA 236 (459)
T KOG0288|consen 163 LPSRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK------SELISTLAGSLGNITSIDFDSDNKHVIA 236 (459)
T ss_pred cchhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccch------hhhhhhhhccCCCcceeeecCCCceEEe
Confidence 3444455678899999999999999999999999999999775422 2345667777889999999999999999
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
++.|+.+++|++...+...++.+|++.|+++.|......+++|+.|.+|+.||+....+.+++- ....+.++..+ ..
T Consensus 237 as~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~~ 313 (459)
T KOG0288|consen 237 ASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--IS 313 (459)
T ss_pred ecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEec--ce
Confidence 9999999999999999999999999999999998877779999999999999999887776543 34456666665 45
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce-eEEE
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK-YCIS 249 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~ 249 (321)
.++++..|+.|++||++++.+...+. ....++++..+++|..+.+++.|.++.+.|+++......+....... .-.+
T Consensus 314 ~~~SgH~DkkvRfwD~Rs~~~~~sv~--~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwt 391 (459)
T KOG0288|consen 314 DVISGHFDKKVRFWDIRSADKTRSVP--LGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWT 391 (459)
T ss_pred eeeecccccceEEEeccCCceeeEee--cCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccc
Confidence 68888999999999999988777663 34479999999999999999999999999999988877775432110 0022
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCC--CeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD--PVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
...++|++.|+++|+.||.|+||++.++++.+.+..... .|++++|+|.|..|++++ .++.+.+|.
T Consensus 392 rvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsad--k~~~v~lW~ 459 (459)
T KOG0288|consen 392 RVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSAD--KQKAVTLWT 459 (459)
T ss_pred eeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhccc--CCcceEecC
Confidence 333458999999999999999999999999988877544 499999999999999986 568899994
No 53
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=3.5e-35 Score=227.49 Aligned_cols=247 Identities=25% Similarity=0.467 Sum_probs=220.0
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
.+.+.+|.+-|.++++.|...+|++|+.|++++|||+.+++...++.+|...+..+++++-..++++++.|+.|+.||+.
T Consensus 144 ~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 144 YRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred hhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEech
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEE
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~ 225 (321)
..+.+..+.+|-..|.+++.+|.-+.+++|+.|.++++||+++...+..+ ..|..+|..+.+.|....+++++.|++|+
T Consensus 224 ~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l-~GH~~~V~~V~~~~~dpqvit~S~D~tvr 302 (460)
T KOG0285|consen 224 YNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVL-SGHTNPVASVMCQPTDPQVITGSHDSTVR 302 (460)
T ss_pred hhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEe-cCCCCcceeEEeecCCCceEEecCCceEE
Confidence 99999999999999999999999999999999999999999998776665 45677899999998888899999999999
Q ss_pred EEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 226 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
+||++.++....+..|...+.++. ..|....+|+++.| .|+-|++..+..+..+.+|..-|++++.+.|+ .+++|
T Consensus 303 lWDl~agkt~~tlt~hkksvral~---lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G 377 (460)
T KOG0285|consen 303 LWDLRAGKTMITLTHHKKSVRALC---LHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSG 377 (460)
T ss_pred EeeeccCceeEeeecccceeeEEe---cCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-eEEEc
Confidence 999999999888887776655543 34566778888776 48999999999999999999999999998776 55666
Q ss_pred eecCCccEEEccccc
Q 020798 306 ALDNDRTVKIWTQEK 320 (321)
Q Consensus 306 ~~d~~~~i~iw~~~~ 320 (321)
+ ++|.+.+||-+.
T Consensus 378 ~--dng~~~fwdwks 390 (460)
T KOG0285|consen 378 G--DNGSIMFWDWKS 390 (460)
T ss_pred C--CceEEEEEecCc
Confidence 6 469999999764
No 54
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2.4e-33 Score=229.03 Aligned_cols=247 Identities=37% Similarity=0.692 Sum_probs=215.3
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT 146 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 146 (321)
..+.+|...|.++.|+|++++|++++.||.+++|++.+++....+..|...+..+.|+|+++.+++++.++.|++||+.+
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~ 82 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLET 82 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCc
Confidence 45678999999999999999999999999999999998887778888999999999999999999999999999999998
Q ss_pred CEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEE
Q 020798 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRL 226 (321)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i 226 (321)
++....+..|...+.++.|+|++.++++++.++.+++||+++++....+. .+...+..+.++|++.++++++.++.|++
T Consensus 83 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 161 (289)
T cd00200 83 GECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLR-GHTDWVNSVAFSPDGTFVASSSQDGTIKL 161 (289)
T ss_pred ccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEec-cCCCcEEEEEEcCcCCEEEEEcCCCcEEE
Confidence 87788888888899999999998888888889999999999776665554 45567899999999998888888999999
Q ss_pred EeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 227 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
||+++++.+..+..+.....++ ...+++..+++++.++.|++||++.++.+..+..|..++.+++|+|++.++++++
T Consensus 162 ~d~~~~~~~~~~~~~~~~i~~~---~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 238 (289)
T cd00200 162 WDLRTGKCVATLTGHTGEVNSV---AFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGS 238 (289)
T ss_pred EEccccccceeEecCccccceE---EECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEc
Confidence 9999888888887665544433 3346777888888899999999999888888888999999999999988888876
Q ss_pred ecCCccEEEcccc
Q 020798 307 LDNDRTVKIWTQE 319 (321)
Q Consensus 307 ~d~~~~i~iw~~~ 319 (321)
.++.|++|+.+
T Consensus 239 --~~~~i~i~~~~ 249 (289)
T cd00200 239 --EDGTIRVWDLR 249 (289)
T ss_pred --CCCcEEEEEcC
Confidence 46899999986
No 55
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=3.3e-33 Score=239.82 Aligned_cols=277 Identities=22% Similarity=0.325 Sum_probs=212.7
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCC----C-CCCCCcccccccccccEEEEEECC-CCCEEEEEeCC
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNS----D-STPPSPLQKFTGHEQGVSDLVFSS-DSRFLVSASDD 94 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~----~-~~~~~~~~~~~~h~~~i~~~~~~~-~~~~l~~~~~d 94 (321)
.|...|.....++++..+++++.+.....|+....... . .........+.+|.+.|.+++|+| ++++|++|+.|
T Consensus 18 ~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~D 97 (493)
T PTZ00421 18 RHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASED 97 (493)
T ss_pred cceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCC
Confidence 35567777788889877888888888888875432110 0 000111224679999999999999 78899999999
Q ss_pred CcEEEEecCCc-------ceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEc
Q 020798 95 KTIRLWDVPTA-------TCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 95 ~~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~ 166 (321)
++|++||+.+. ..+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++....+..|...|.+++|+
T Consensus 98 gtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~s 177 (493)
T PTZ00421 98 GTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWN 177 (493)
T ss_pred CEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEE
Confidence 99999999764 2456778999999999999985 689999999999999999999888888999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe----cCCeEEEEeCCCCc-EEEEEecc
Q 020798 167 RDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT----LDNTLRLWNYSTGK-ILKTYTGH 241 (321)
Q Consensus 167 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~----~d~~i~i~d~~~~~-~~~~~~~~ 241 (321)
|++..|++++.|+.|++||+++++.+..+..........+.|.+++..+++++ .|+.|++||+++.. ++.....+
T Consensus 178 pdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d 257 (493)
T PTZ00421 178 LDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLD 257 (493)
T ss_pred CCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccC
Confidence 99999999999999999999998877665433333345677888887777654 47899999998754 33333322
Q ss_pred CCceeEEEeEEEecCCeEEEEeC-CCCeEEEEEcccceEEEEecC-CCCCeEEEEecCCC
Q 020798 242 TNSKYCISSTFSVTNGKYIVSGS-EDSCVYLWELQSRKVVQKLEG-HTDPVISVASHPTE 299 (321)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~ 299 (321)
... .+...++.+++.+|++|+ .|+.|++||+.+++++..... +..++.+++|.|..
T Consensus 258 ~~~--~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~ 315 (493)
T PTZ00421 258 QSS--ALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKW 315 (493)
T ss_pred CCC--ceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecccc
Confidence 222 233344557788888776 599999999999887765543 45678899998874
No 56
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.5e-34 Score=228.92 Aligned_cols=292 Identities=27% Similarity=0.459 Sum_probs=231.3
Q ss_pred ccccCCcceeeeeccCCcccEEEEEECCCCCE-EEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC
Q 020798 6 SLESFRPYTLTQTLNGHLRAISSVKFSHDGRL-LASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD 84 (321)
Q Consensus 6 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~-l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~ 84 (321)
.++.|+-++.....+.| ..|++++|||...+ +|+++ .-.+.+|+.... .....+...+..++++.|-.|
T Consensus 10 e~~~w~~~~~~~~~ke~-~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~--------~~~k~~srFk~~v~s~~fR~D 79 (487)
T KOG0310|consen 10 EIRYWRQETFPPVHKEH-NSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTR--------SVRKTFSRFKDVVYSVDFRSD 79 (487)
T ss_pred cchhhhhhccccccccc-CcceeEecCCCCCCceEEec-ccEEEEEecchh--------hhhhhHHhhccceeEEEeecC
Confidence 34555555544444434 78999999997654 45444 456777865432 234445556788999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 163 (321)
|++|++|...|.|++||+.+...+..+.+|..++..+.|+|+++. |++|+.|+.+++||+.+......+..|++.|.+.
T Consensus 80 G~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g 159 (487)
T KOG0310|consen 80 GRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCG 159 (487)
T ss_pred CeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEee
Confidence 999999999999999997776677888999999999999997664 6788889999999999888766889999999999
Q ss_pred EEccCCC-EEEEEeCCCeEEEEeCCCCc-eeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC-cEEEEEec
Q 020798 164 DFNRDGT-MIVTSSYDGLCRIWDASTGH-CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG-KILKTYTG 240 (321)
Q Consensus 164 ~~~~~~~-~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~-~~~~~~~~ 240 (321)
+|+|... .+++|++||.|++||++... .+.+ -.++.+|..+.+-|.|..+++++. +.+++||+.+| +.+..+..
T Consensus 160 ~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~e--lnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~ 236 (487)
T KOG0310|consen 160 DISPANDHIVVTGSYDGKVRLWDTRSLTSRVVE--LNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFN 236 (487)
T ss_pred ccccCCCeEEEecCCCceEEEEEeccCCceeEE--ecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhc
Confidence 9999755 78899999999999999763 3333 367788999999999999988764 57999999854 55555555
Q ss_pred cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
|...+.|+.. ..++..|++|+-||.|++||+.+-+.++.+. ..++|.+++.+|++..++.|.. ||.+.+=
T Consensus 237 H~KtVTcL~l---~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGms--nGlv~~r 306 (487)
T KOG0310|consen 237 HNKTVTCLRL---ASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMS--NGLVSIR 306 (487)
T ss_pred ccceEEEEEe---ecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecc--cceeeee
Confidence 7777666543 3478999999999999999998888888776 4689999999999999999873 5666543
No 57
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=3.7e-36 Score=232.31 Aligned_cols=232 Identities=33% Similarity=0.642 Sum_probs=203.1
Q ss_pred ccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE
Q 020798 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 72 h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 151 (321)
...+|+|+.+. ...+++|..|++|+|||..+..+.+.+.||++.|.|+.|. .+.+++|+.|.+|++||.++++++.
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLN 271 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhh
Confidence 35689999985 4468999999999999999999999999999999999886 4589999999999999999999999
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce--eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC--MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
++..|...|..+.|+ ..++++++.|.++.+||+..... ....+.++...++.+.|+ .+++++++.|.+|++|++
T Consensus 272 tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~ 347 (499)
T KOG0281|consen 272 TLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWST 347 (499)
T ss_pred HHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEec
Confidence 999999999999997 45899999999999999876532 233445677778888875 559999999999999999
Q ss_pred CCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecC
Q 020798 230 STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
.+++.++.+.+|...+.|+- -.++++++|++|.+|++||+..+.++..++||..=|.++.|. ...+++|+.|
T Consensus 348 st~efvRtl~gHkRGIAClQ-----Yr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYD- 419 (499)
T KOG0281|consen 348 STCEFVRTLNGHKRGIACLQ-----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYD- 419 (499)
T ss_pred cceeeehhhhcccccceehh-----ccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--Cceeeecccc-
Confidence 99999999999988755432 368999999999999999999999999999999999999995 6789999976
Q ss_pred CccEEEccccc
Q 020798 310 DRTVKIWTQEK 320 (321)
Q Consensus 310 ~~~i~iw~~~~ 320 (321)
|.|++||+..
T Consensus 420 -GkikvWdl~a 429 (499)
T KOG0281|consen 420 -GKIKVWDLQA 429 (499)
T ss_pred -ceEEEEeccc
Confidence 8999999853
No 58
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.9e-33 Score=245.67 Aligned_cols=298 Identities=23% Similarity=0.362 Sum_probs=240.4
Q ss_pred CCcccEEEEEECCCCCEEEEec--CCceEEEeeccccCCCCC----CCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 21 GHLRAISSVKFSHDGRLLASSS--ADKTLLTYSLSSISNSDS----TPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~--~d~~v~~~~~~~~~~~~~----~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
.+...|.++..+|+|..+|||+ .|+.+++|.......... .-+..+.....|.+.|.|+.|+|||++||+|++|
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence 3456799999999999999999 899999998765442111 1234456667899999999999999999999999
Q ss_pred CcEEEEecCC------------------cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC
Q 020798 95 KTIRLWDVPT------------------ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH 156 (321)
Q Consensus 95 ~~i~iwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 156 (321)
+.|.||.... .++...+.+|.+.|..++|+|++.+|++++.|++|.+|+.++.+.+..+..|
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H 170 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGH 170 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecc
Confidence 9999998762 1245567899999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCC-----CCeEEEEEccCCCEEEEEec----CCeEEEE
Q 020798 157 SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN-----PPVSFVKFSPNGKFILVGTL----DNTLRLW 227 (321)
Q Consensus 157 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~----d~~i~i~ 227 (321)
...|..+.|.|-|++|++-+.|+++++|++.+-...+.+....+ .....+.|+|||++|++... -..+.|.
T Consensus 171 ~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Ii 250 (942)
T KOG0973|consen 171 QSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAII 250 (942)
T ss_pred cccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEE
Confidence 99999999999999999999999999999776555554433222 23567899999999988642 2368899
Q ss_pred eCCCCcEEEEEeccCCceeEEEeEE---EecCC-----------eEEEEeCCCCeEEEEEcccceEEEEecC-CCCCeEE
Q 020798 228 NYSTGKILKTYTGHTNSKYCISSTF---SVTNG-----------KYIVSGSEDSCVYLWELQSRKVVQKLEG-HTDPVIS 292 (321)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----------~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~ 292 (321)
+-.+.+.-..+.+|..+..++.+.- -.+.. ..+|+|+.|++|.||.....+++..+.. ...+|.+
T Consensus 251 eR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~D 330 (942)
T KOG0973|consen 251 ERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVD 330 (942)
T ss_pred ecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceee
Confidence 8888888888899988766654321 11111 1688999999999999987777654433 3568999
Q ss_pred EEecCCCceEEEEeecCCccEEEccccc
Q 020798 293 VASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 293 ~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
++|+|||..|..+|.| |+|.+...+.
T Consensus 331 msWspdG~~LfacS~D--GtV~~i~Fee 356 (942)
T KOG0973|consen 331 MSWSPDGFSLFACSLD--GTVALIHFEE 356 (942)
T ss_pred eeEcCCCCeEEEEecC--CeEEEEEcch
Confidence 9999999999999976 7898887764
No 59
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.4e-33 Score=211.99 Aligned_cols=272 Identities=21% Similarity=0.422 Sum_probs=221.1
Q ss_pred EEEEecCCceEEEeeccccC----CCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeee
Q 020798 37 LLASSSADKTLLTYSLSSIS----NSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI 112 (321)
Q Consensus 37 ~l~~~~~d~~v~~~~~~~~~----~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 112 (321)
.|++|+++..|.-+++.-.. ........++..+..|.++|++++. +++++++|+.|-+|+|||+.+...+..+.
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll 80 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILL 80 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhccee
Confidence 36778888888777665433 1122233456778899999999998 47899999999999999999998888889
Q ss_pred cCcccEEEEEECCCCC--EEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCc
Q 020798 113 GHTNYVFCVNFNPQSN--MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190 (321)
Q Consensus 113 ~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 190 (321)
.|.+.|+++.|.++-. .|++|+.||.|.+|+...-.++..++.|...|+.++.+|.+++.++.+.|+.+++|++-.++
T Consensus 81 ~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr 160 (362)
T KOG0294|consen 81 SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGR 160 (362)
T ss_pred ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCc
Confidence 9999999999998764 89999999999999999999999999999999999999999999999999999999997776
Q ss_pred eeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEE
Q 020798 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVY 270 (321)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 270 (321)
......-.. ....+.|+|.|.+++.+..+ .|-+|.+.+.++...+... ....|+. ..++..|++|..|+.|+
T Consensus 161 ~a~v~~L~~--~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~-~r~l~~~----~l~~~~L~vG~d~~~i~ 232 (362)
T KOG0294|consen 161 VAFVLNLKN--KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENP-KRILCAT----FLDGSELLVGGDNEWIS 232 (362)
T ss_pred cceeeccCC--cceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcc-ccceeee----ecCCceEEEecCCceEE
Confidence 433332222 23458999999999887766 4999998877665554332 1222222 24688999999999999
Q ss_pred EEEcccceEEEEecCCCCCeEEEEe--cCCCceEEEEeecCCccEEEccccc
Q 020798 271 LWELQSRKVVQKLEGHTDPVISVAS--HPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 271 vwd~~~~~~~~~~~~h~~~v~~~~~--~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+||..+...+..+.+|..+|-++.+ .|++.+|+|+|. ||.|++||++-
T Consensus 233 ~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSS--DG~I~vWd~~~ 282 (362)
T KOG0294|consen 233 LKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASS--DGFIKVWDIDM 282 (362)
T ss_pred EeccCCCccceeeecchhheeeeEEEecCCceEEEEecc--CceEEEEEccc
Confidence 9999988889999999999999873 677889999994 58999999863
No 60
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=3.6e-32 Score=203.37 Aligned_cols=243 Identities=26% Similarity=0.516 Sum_probs=201.8
Q ss_pred ccccccccccEEEEEECCC-CCEEEEEeCCCcEEEEecCCc---ceeeee-ecCcccEEEEEECCCCCEEEEeeCCCcEE
Q 020798 66 LQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLWDVPTA---TCLKTL-IGHTNYVFCVNFNPQSNMIVSGAFDETVR 140 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 140 (321)
++.+.+|++.+..++|+|- |..||+++.|+.|++|+...+ .+...+ .+|+..|.+++|+|.|++|++++.|.++.
T Consensus 7 ~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~ 86 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVV 86 (312)
T ss_pred EEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEE
Confidence 4567899999999999998 889999999999999998743 332222 37999999999999999999999999999
Q ss_pred EEecCCC--EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCc--eeeeeccCCCCCeEEEEEccCCCEEE
Q 020798 141 IWDVKTG--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH--CMKTLIDDENPPVSFVKFSPNGKFIL 216 (321)
Q Consensus 141 ~wd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~l~ 216 (321)
+|.-..+ +++..+.+|+..|.+++|+++|++|++++.|..+-+|.+.... .....+.+|...|..+.|+|...+|+
T Consensus 87 Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~ 166 (312)
T KOG0645|consen 87 IWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLF 166 (312)
T ss_pred EeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeE
Confidence 9976543 6788999999999999999999999999999999999887433 23345567788899999999999999
Q ss_pred EEecCCeEEEEeCC---CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEE
Q 020798 217 VGTLDNTLRLWNYS---TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV 293 (321)
Q Consensus 217 ~~~~d~~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 293 (321)
+++.|++|++|+-. ....++++.+|...++++.+ .+.|..|++++.|++|+||...+.-. .-|..++..+
T Consensus 167 S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F---~~~G~rl~s~sdD~tv~Iw~~~~~~~----~~~sr~~Y~v 239 (312)
T KOG0645|consen 167 SCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAF---DNIGSRLVSCSDDGTVSIWRLYTDLS----GMHSRALYDV 239 (312)
T ss_pred EeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEe---cCCCceEEEecCCcceEeeeeccCcc----hhcccceEee
Confidence 99999999999865 33578889999887766543 36789999999999999999763211 2377899999
Q ss_pred EecCCCceEEEEeecCCccEEEcccc
Q 020798 294 ASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 294 ~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+|. ...||+++ +|+.|+++...
T Consensus 240 ~W~--~~~IaS~g--gD~~i~lf~~s 261 (312)
T KOG0645|consen 240 PWD--NGVIASGG--GDDAIRLFKES 261 (312)
T ss_pred eec--ccceEecc--CCCEEEEEEec
Confidence 998 56888888 56789988643
No 61
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=1e-32 Score=237.24 Aligned_cols=274 Identities=33% Similarity=0.626 Sum_probs=236.2
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccc-cccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQK-FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~-~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
|...+.+..|. ..++++++.++++.+|+.... ..+.. +.+|.++|.++++..-+.+|++|+.|.++++|
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~--------~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvW 276 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNG--------YLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVW 276 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccc--------eEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeE
Confidence 56778888888 668999999999999976432 23344 88999999999998878899999999999999
Q ss_pred ecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCe
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGL 180 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 180 (321)
|..++.+...+.+|.+.+.++...+ ..+++|+.|.+|++|++.++..+..+.+|..+|.++..+ +..+++|+.|++
T Consensus 277 d~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~ 352 (537)
T KOG0274|consen 277 DCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGT 352 (537)
T ss_pred ecCCCcEEEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCce
Confidence 9999999999999999999887754 568888999999999999999999998899999999987 789999999999
Q ss_pred EEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCceeEEEeEEEecCCeE
Q 020798 181 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG-KILKTYTGHTNSKYCISSTFSVTNGKY 259 (321)
Q Consensus 181 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (321)
|++||+.+++++..+.. |...|.++.+.+. ..++.|+.|+.|++||+.+. +.+..+.+|...+..+. ..+++
T Consensus 353 v~VW~~~~~~cl~sl~g-H~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~-----~~~~~ 425 (537)
T KOG0274|consen 353 VKVWDPRTGKCLKSLSG-HTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLL-----LRDNF 425 (537)
T ss_pred EEEEEhhhceeeeeecC-CcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccccccc-----cccce
Confidence 99999999999888765 6777888877654 78999999999999999999 88999988877553332 25788
Q ss_pred EEEeCCCCeEEEEEcccceEEEEecC-CCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 260 IVSGSEDSCVYLWELQSRKVVQKLEG-HTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
|++++.|+.|++||..+++++..+.+ |...|..+++. ...+++++ .++.+++||++.
T Consensus 426 Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~--~~~~~~l~dl~~ 483 (537)
T KOG0274|consen 426 LVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSS--DDGSVKLWDLRS 483 (537)
T ss_pred eEeccccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEe--cCCeeEEEeccc
Confidence 99999999999999999999999998 67889999887 34555555 468999999865
No 62
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=9e-33 Score=220.48 Aligned_cols=286 Identities=22% Similarity=0.393 Sum_probs=231.5
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCC--C-------CCCccccc-ccccccEEEEEECCCCC
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDS--T-------PPSPLQKF-TGHEQGVSDLVFSSDSR 86 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~--~-------~~~~~~~~-~~h~~~i~~~~~~~~~~ 86 (321)
+.+..|..+|.+++++|++++..+++.+++|.-|+......... . ...+...- ++|...+.+++.++||+
T Consensus 136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence 45678999999999999999999999999999998765442211 0 11122222 48999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEc
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~ 166 (321)
+|++|+.|..|.||+.++.+.++.+.+|.+.|.+++|-...+.+++++.|..+++|++.....+.++.+|.+.|.++...
T Consensus 216 ylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL 295 (479)
T KOG0299|consen 216 YLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDAL 295 (479)
T ss_pred EEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechh
Confidence 99999999999999999999999999999999999999888899999999999999999888888889999999999988
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC--c
Q 020798 167 RDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN--S 244 (321)
Q Consensus 167 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~ 244 (321)
..++.+.+|+.|.++++|++.. ..+.++..+...+.+++|-.+ ..+++|+.+|.|.+|++.+.+++......++ +
T Consensus 296 ~reR~vtVGgrDrT~rlwKi~e--esqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~ 372 (479)
T KOG0299|consen 296 SRERCVTVGGRDRTVRLWKIPE--ESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIP 372 (479)
T ss_pred cccceEEeccccceeEEEeccc--cceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccccccC
Confidence 8888777888999999999943 233444455667788887654 4688999999999999999888877643221 1
Q ss_pred e-------eEEEeEEEecCCeEEEEeCCCCeEEEEEcccc----eEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 245 K-------YCISSTFSVTNGKYIVSGSEDSCVYLWELQSR----KVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 245 ~-------~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
. .-++..+..+...++|+|+.+|+|++|.+..+ .++..+. ..+.|++++|+++|..+++|-
T Consensus 373 ~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagi 444 (479)
T KOG0299|consen 373 ELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGI 444 (479)
T ss_pred CccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEec
Confidence 1 12444555577889999999999999999776 3445554 567899999999999777663
No 63
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=4.6e-32 Score=249.78 Aligned_cols=264 Identities=20% Similarity=0.373 Sum_probs=210.4
Q ss_pred CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc----c----eeeeeecCc
Q 020798 44 DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA----T----CLKTLIGHT 115 (321)
Q Consensus 44 d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~----~~~~~~~~~ 115 (321)
+|.+++|+........ ......+..|...|.+++|+|++++|++|+.|+.|++|++... . ....+. +.
T Consensus 457 ~gl~~~~~~~~~~~~~---~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~ 532 (793)
T PLN00181 457 EGLCKYLSFSKLRVKA---DLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SR 532 (793)
T ss_pred hhhhhhhcccceEEEE---eeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-cc
Confidence 5556666554332110 0111234568999999999999999999999999999997532 1 112222 34
Q ss_pred ccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceee
Q 020798 116 NYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTGHCMK 193 (321)
Q Consensus 116 ~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~ 193 (321)
..+.+++|+|. +.+|++++.||.|++||+.+++.+..+..|...|++++|+| ++.+|++++.|+.|++||++++....
T Consensus 533 ~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~ 612 (793)
T PLN00181 533 SKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG 612 (793)
T ss_pred CceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE
Confidence 56889999874 68899999999999999999998888999999999999997 68899999999999999999887766
Q ss_pred eeccCCCCCeEEEEEc-cCCCEEEEEecCCeEEEEeCCCCc-EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEE
Q 020798 194 TLIDDENPPVSFVKFS-PNGKFILVGTLDNTLRLWNYSTGK-ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271 (321)
Q Consensus 194 ~~~~~~~~~~~~~~~~-~~g~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~v 271 (321)
.+.. ...+.++.|+ ++|.+|++|+.|+.|++||+++.+ .+..+.+|...+..+.+ .++.+|++++.|+.|++
T Consensus 613 ~~~~--~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f----~~~~~lvs~s~D~~iki 686 (793)
T PLN00181 613 TIKT--KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRF----VDSSTLVSSSTDNTLKL 686 (793)
T ss_pred EEec--CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEE----eCCCEEEEEECCCEEEE
Confidence 6542 3467788885 579999999999999999998765 46667778776555432 26788999999999999
Q ss_pred EEcccc------eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 272 WELQSR------KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 272 wd~~~~------~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
||+... ..+..+.+|...+..++|+|++.+||+|+. |+.|++|+..
T Consensus 687 Wd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~--D~~v~iw~~~ 738 (793)
T PLN00181 687 WDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE--TNEVFVYHKA 738 (793)
T ss_pred EeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeC--CCEEEEEECC
Confidence 999742 567889999999999999999999999994 5899999853
No 64
>PTZ00420 coronin; Provisional
Probab=100.00 E-value=1.5e-31 Score=230.80 Aligned_cols=248 Identities=19% Similarity=0.326 Sum_probs=191.5
Q ss_pred ecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeCCCcEEEEecCCcc--------eeeee
Q 020798 41 SSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLWDVPTAT--------CLKTL 111 (321)
Q Consensus 41 ~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~--------~~~~~ 111 (321)
|+.++.+++|+... ..++..+.+|.+.|.+++|+|+ +++|++|+.|+.|++||+.+.. ++..+
T Consensus 50 GG~~gvI~L~~~~r--------~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L 121 (568)
T PTZ00420 50 GGLIGAIRLENQMR--------KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCIL 121 (568)
T ss_pred CCceeEEEeeecCC--------CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEe
Confidence 56677888886542 2346678899999999999997 7899999999999999997542 23456
Q ss_pred ecCcccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCc
Q 020798 112 IGHTNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190 (321)
Q Consensus 112 ~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 190 (321)
.+|...|.+++|+|++.. |++++.|+.|++||+++++....+. |...|.+++|+|+|.+|++++.|+.+++||+++++
T Consensus 122 ~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~ 200 (568)
T PTZ00420 122 KGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQE 200 (568)
T ss_pred ecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCc
Confidence 789999999999999875 5789999999999999988776665 56789999999999999999999999999999988
Q ss_pred eeeeeccCCCCCe-----EEEEEccCCCEEEEEecCC----eEEEEeCCC-CcEEEEEeccCCceeEEEeEEEecCCeEE
Q 020798 191 CMKTLIDDENPPV-----SFVKFSPNGKFILVGTLDN----TLRLWNYST-GKILKTYTGHTNSKYCISSTFSVTNGKYI 260 (321)
Q Consensus 191 ~~~~~~~~~~~~~-----~~~~~~~~g~~l~~~~~d~----~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (321)
.+..+.. |...+ ....|++++.+|++++.|+ .|+|||+++ .+++..+..+.. ...+...+..+++.++
T Consensus 201 ~i~tl~g-H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~-~~~L~p~~D~~tg~l~ 278 (568)
T PTZ00420 201 IASSFHI-HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA-SAPLIPHYDESTGLIY 278 (568)
T ss_pred EEEEEec-ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC-ccceEEeeeCCCCCEE
Confidence 7766543 33322 2233568889999988764 799999985 555655533322 2233344455678999
Q ss_pred EEeCCCCeEEEEEcccceEEEEecC--CCCCeEEEEecCCCc
Q 020798 261 VSGSEDSCVYLWELQSRKVVQKLEG--HTDPVISVASHPTEN 300 (321)
Q Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~ 300 (321)
++|+.|+.|++|++..+.. ..+.. +..++.+++|.|+..
T Consensus 279 lsGkGD~tIr~~e~~~~~~-~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 279 LIGKGDGNCRYYQHSLGSI-RKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred EEEECCCeEEEEEccCCcE-EeecccccCCCccceEEccccc
Confidence 9999999999999977642 33322 567899999999853
No 65
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=100.00 E-value=3.2e-32 Score=215.94 Aligned_cols=283 Identities=22% Similarity=0.373 Sum_probs=239.2
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
..++.++...|..+.+++|+.|..+.++|.. ....+..++||...|..+.++|+...+++++.|..|++|..
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~--------s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~ 290 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKP--------SNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSV 290 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecc--------hhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecc
Confidence 4578888888888899999999999999753 34567889999999999999999999999999999999999
Q ss_pred CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC--CCCeeEEEEccCCCEEEEEeCCCe
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH--SDPVTAVDFNRDGTMIVTSSYDGL 180 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~ 180 (321)
....+......|.++|+.+..+|.|.+|++++.|++..+.|++++.++...... .-.+++.+|+|||..|.+|..||.
T Consensus 291 ~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~ 370 (506)
T KOG0289|consen 291 PLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGV 370 (506)
T ss_pred ccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCce
Confidence 888777778899999999999999999999999999999999999877665432 234789999999999999999999
Q ss_pred EEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEE
Q 020798 181 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260 (321)
Q Consensus 181 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (321)
+++||+.++.....+ ..|..+|..++|+.+|-||+++..|+.|++||+++.+..+++...... .+......+.|.+|
T Consensus 371 vkiwdlks~~~~a~F-pght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~--~v~s~~fD~SGt~L 447 (506)
T KOG0289|consen 371 VKIWDLKSQTNVAKF-PGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK--EVNSLSFDQSGTYL 447 (506)
T ss_pred EEEEEcCCccccccC-CCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccc--cceeEEEcCCCCeE
Confidence 999999988765555 457889999999999999999999999999999998887777654432 22233345679999
Q ss_pred EEeCCCCeEEEEEcc--cceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 261 VSGSEDSCVYLWELQ--SRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 261 ~~~~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+.++.|=.|++++-. +...+..+..|.+..+.+.|.....+++++|+| ..++++.+
T Consensus 448 ~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd--~~l~~~a~ 505 (506)
T KOG0289|consen 448 GIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMD--AILRLYAL 505 (506)
T ss_pred EeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccch--hheEEeec
Confidence 999888666666632 456677788888899999999999999999976 56877754
No 66
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.8e-32 Score=212.86 Aligned_cols=247 Identities=23% Similarity=0.422 Sum_probs=201.6
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
....+.||+..|+++.||+||.+||||+.+|.|++|...+.. ....+...-..|.-+.|+|.+..|++|+.|
T Consensus 98 ~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~--------~~~~~~~e~~dieWl~WHp~a~illAG~~D 169 (399)
T KOG0296|consen 98 FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGG--------EQWKLDQEVEDIEWLKWHPRAHILLAGSTD 169 (399)
T ss_pred ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCc--------eEEEeecccCceEEEEecccccEEEeecCC
Confidence 456688999999999999999999999999999999775432 122232334668889999999999999999
Q ss_pred CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC------C------------
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA------H------------ 156 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~------~------------ 156 (321)
|++-+|.+.+....+.+.+|+..+++-.|.|+|+.++++..||+|++|+++++++...+.. +
T Consensus 170 GsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~ 249 (399)
T KOG0296|consen 170 GSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLT 249 (399)
T ss_pred CcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeE
Confidence 9999999999877888999999999999999999999999999999999998876655431 0
Q ss_pred ---------------------------------CCCeeEEEEcc---CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCC
Q 020798 157 ---------------------------------SDPVTAVDFNR---DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN 200 (321)
Q Consensus 157 ---------------------------------~~~v~~~~~~~---~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 200 (321)
...+.++.+.| .-.+.++|+-||+|.+||+......... .+.
T Consensus 250 ~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c--~he 327 (399)
T KOG0296|consen 250 KGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC--EHE 327 (399)
T ss_pred eccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheec--cCC
Confidence 01122233333 3346778899999999999876544433 455
Q ss_pred CCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 201 PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 201 ~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
.+|..+.|.+ ..+|++++.+|.|+.||.++|+++..+.+|...+..+.. .++.+++++++.|++.+||+..
T Consensus 328 ~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~l---s~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 328 DGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFAL---SPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred CceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEE---cCCCcEEEEecCCCeEEEEecC
Confidence 6799999998 778999999999999999999999999999988765433 4789999999999999999864
No 67
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.6e-33 Score=236.45 Aligned_cols=247 Identities=27% Similarity=0.486 Sum_probs=198.3
Q ss_pred cccc-cccccEEEEEECCCCCEEEEEeCCCcEEEEecCC--------------------------------c--------
Q 020798 67 QKFT-GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT--------------------------------A-------- 105 (321)
Q Consensus 67 ~~~~-~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~--------------------------------~-------- 105 (321)
+.+. .|++.|.++.|++||+|||+||.|+.|+||.+.. .
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3455 8999999999999999999999999999998643 0
Q ss_pred --------------------ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEE
Q 020798 106 --------------------TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 106 --------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 165 (321)
+++..+.||.+.|..+.|+.+ ++|++++.|.++++|++...+++..| .|.+-|++++|
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F-~HndfVTcVaF 417 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVF-SHNDFVTCVAF 417 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEE-ecCCeeEEEEe
Confidence 011234689999999999975 68999999999999999999999887 48999999999
Q ss_pred cc-CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC-
Q 020798 166 NR-DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN- 243 (321)
Q Consensus 166 ~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~- 243 (321)
+| |.++|++|+-|+.++||++...+.+. +. +-..-|+.++|.|+|++.++|+.+|.+++|+....++.....-+..
T Consensus 418 nPvDDryFiSGSLD~KvRiWsI~d~~Vv~-W~-Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~ 495 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDGKVRLWSISDKKVVD-WN-DLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHN 495 (712)
T ss_pred cccCCCcEeecccccceEEeecCcCeeEe-eh-hhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeecc
Confidence 99 67799999999999999998765432 22 2335689999999999999999999999999988777665532211
Q ss_pred -----ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC--CCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 244 -----SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT--DPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 244 -----~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
........+.+.+...+++.+.|..|||||.+...++.+++|+. .......|+.||++|++|+. |..|+||
T Consensus 496 ~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~se--Ds~VYiW 573 (712)
T KOG0283|consen 496 KKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASE--DSWVYIW 573 (712)
T ss_pred CccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeec--CceEEEE
Confidence 11112233333344456677889999999999999999999864 35678899999999999994 5789999
Q ss_pred ccc
Q 020798 317 TQE 319 (321)
Q Consensus 317 ~~~ 319 (321)
+.+
T Consensus 574 ~~~ 576 (712)
T KOG0283|consen 574 KND 576 (712)
T ss_pred eCC
Confidence 974
No 68
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.7e-33 Score=205.56 Aligned_cols=279 Identities=22% Similarity=0.442 Sum_probs=215.2
Q ss_pred EEEEECC--CCCE-EEEec-----CCceEEEeeccccCCCCCCCCCcccccc--cccccEEEEEECCC-CCEEEEEeCCC
Q 020798 27 SSVKFSH--DGRL-LASSS-----ADKTLLTYSLSSISNSDSTPPSPLQKFT--GHEQGVSDLVFSSD-SRFLVSASDDK 95 (321)
Q Consensus 27 ~~~~~s~--~g~~-l~~~~-----~d~~v~~~~~~~~~~~~~~~~~~~~~~~--~h~~~i~~~~~~~~-~~~l~~~~~d~ 95 (321)
.++.||| ++++ +|++. ..|.+.|-++.+ ...++.+. .-.+++.+++|+++ .+.+++++.||
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~--------~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDG 83 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTD--------PKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDG 83 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCC--------CCCeEEEEeeecccceeEeeecCCCcceEEEEecCc
Confidence 4678998 3433 23322 256677765532 11122221 23578999999986 46788999999
Q ss_pred cEEEEecCCc-ceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC-CCEE
Q 020798 96 TIRLWDVPTA-TCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD-GTMI 172 (321)
Q Consensus 96 ~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 172 (321)
++++||+... .++..++.|...|.++.|++.. ..+++++.|++|++|+...++.+.++.+|...|....|+|. .+.+
T Consensus 84 SLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlf 163 (311)
T KOG0277|consen 84 SLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLF 163 (311)
T ss_pred eEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeE
Confidence 9999996443 4677788999999999999864 45788899999999999988999999999999999999995 6789
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCc-EEEEEeccCCceeEEEe
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGK-ILKTYTGHTNSKYCISS 250 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~ 250 (321)
++++.|+++++||++....... +..+...+.++.|+. +...+++|+.|+.|+.||+++-+ ++..+.+|.-.+..+
T Consensus 164 as~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkv-- 240 (311)
T KOG0277|consen 164 ASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKV-- 240 (311)
T ss_pred EEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEE--
Confidence 9999999999999986543333 334556788888887 56778899999999999998754 567777776554443
Q ss_pred EEEecCCeEEEEeCCCCeEEEEEcccc-eEEEEecCCCCCeEEEEecCC-CceEEEEeecCCccEEEccc
Q 020798 251 TFSVTNGKYIVSGSEDSCVYLWELQSR-KVVQKLEGHTDPVISVASHPT-ENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~p~-~~~l~s~~~d~~~~i~iw~~ 318 (321)
.+++.....||+++.|-++|+||...+ ..+.+.+.|+..|..+.|++- +.++|+.+.| +.++||+.
T Consensus 241 k~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWD--e~l~Vw~p 308 (311)
T KOG0277|consen 241 KFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWD--ELLYVWNP 308 (311)
T ss_pred ecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccc--cceeeecc
Confidence 344556778999999999999999754 455667789999999999875 5789999987 58999985
No 69
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=4.4e-34 Score=229.21 Aligned_cols=251 Identities=24% Similarity=0.460 Sum_probs=210.6
Q ss_pred CCCcccccccccccEEEEEECC-CCCEEEEEeCCCcEEEEecCC-cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcE
Q 020798 62 PPSPLQKFTGHEQGVSDLVFSS-DSRFLVSASDDKTIRLWDVPT-ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETV 139 (321)
Q Consensus 62 ~~~~~~~~~~h~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 139 (321)
|...+..+.+|..+|+++.|.| .+.+|++++.|+.|+||++.. +.+++++.+|..+|..++|+++|..|++++.|+.|
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~l 282 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFL 282 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceee
Confidence 3345567899999999999999 789999999999999999876 78999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEEeCCCCCeeEEEEccCC-CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE
Q 020798 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDG-TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 218 (321)
++||+++|++...+.. ...++++.|+|++ +.|++|+.|+.|+.||+++++.++.+ ..+-..+..+.|-++|+.++++
T Consensus 283 KlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeY-d~hLg~i~~i~F~~~g~rFiss 360 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEY-DRHLGAILDITFVDEGRRFISS 360 (503)
T ss_pred eeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHH-HhhhhheeeeEEccCCceEeee
Confidence 9999999999988864 4567899999998 78999999999999999999877665 3455678899999999999999
Q ss_pred ecCCeEEEEeCCCCcEEEEEeccC-CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce---EEEEecCCC--CCeEE
Q 020798 219 TLDNTLRLWNYSTGKILKTYTGHT-NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK---VVQKLEGHT--DPVIS 292 (321)
Q Consensus 219 ~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~h~--~~v~~ 292 (321)
+.|++++||+.+.+-++....... ....+ +...|++.++++-+-|..|.+|.+...- ..+.+++|. +--..
T Consensus 361 SDdks~riWe~~~~v~ik~i~~~~~hsmP~---~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~ 437 (503)
T KOG0282|consen 361 SDDKSVRIWENRIPVPIKNIADPEMHTMPC---LTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQ 437 (503)
T ss_pred ccCccEEEEEcCCCccchhhcchhhccCcc---eecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceee
Confidence 999999999998876665443221 11222 3335789999999999999999975432 234577885 34577
Q ss_pred EEecCCCceEEEEeecCCccEEEcccc
Q 020798 293 VASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 293 ~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+.|||||++|++|. .+|.+.+||-+
T Consensus 438 v~fSpDG~~l~SGd--sdG~v~~wdwk 462 (503)
T KOG0282|consen 438 VDFSPDGRTLCSGD--SDGKVNFWDWK 462 (503)
T ss_pred EEEcCCCCeEEeec--CCccEEEeech
Confidence 89999999999996 66899999964
No 70
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=100.00 E-value=4e-32 Score=226.77 Aligned_cols=286 Identities=26% Similarity=0.433 Sum_probs=237.7
Q ss_pred CcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEE-EEECC-CCCEE
Q 020798 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSD-LVFSS-DSRFL 88 (321)
Q Consensus 11 ~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~~~-~~~~l 88 (321)
..|++.+.+.||...|..++..+. ..++++|.||++++|+..... ......+.+|.+-|.. +++.+ ++-.+
T Consensus 2 ~~Y~ls~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~------~l~~~~~~~~~g~i~~~i~y~e~~~~~l 74 (745)
T KOG0301|consen 2 PQYKLSHELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQ------YLETHAFEGPKGFIANSICYAESDKGRL 74 (745)
T ss_pred CcceeEEEeccCccchheeEecCC-eEEeecCCCCceeeeeccCcc------cccceecccCcceeeccceeccccCcce
Confidence 458899999999999998887654 478999999999999764322 1223345667777776 77775 44468
Q ss_pred EEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 89 VSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
++|+.|..+.+|......++..+.+|...|.++....++. +++|++|.++++|.. +++...+++|..+|++++.-|+
T Consensus 75 ~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e 151 (745)
T KOG0301|consen 75 VVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPE 151 (745)
T ss_pred EeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCC
Confidence 9999999999999999999999999999999998887776 999999999999964 5667779999999999999998
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEE
Q 020798 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 248 (321)
+ .+++|+.|.+|++|.- ++..+.+ ..|...|..+++-+++. +++++.||.|++|++ +++.+..+.+|+..++++
T Consensus 152 ~-~~vTgsaDKtIklWk~--~~~l~tf-~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsi 225 (745)
T KOG0301|consen 152 N-TYVTGSADKTIKLWKG--GTLLKTF-SGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSI 225 (745)
T ss_pred C-cEEeccCcceeeeccC--Cchhhhh-ccchhheeeeEEecCCC-eEeecCCceEEEEec-cCceeeeeeccceEEEEE
Confidence 8 7899999999999975 3444444 45777899999988764 678999999999998 788899999999988888
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+. ..+++.++++++|+++++|+.. ++.+.+.-....|+++.+-++|++++.|| ||.|+||..++
T Consensus 226 s~---~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~S---DG~VrVfT~~k 289 (745)
T KOG0301|consen 226 SM---ALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGGS---DGRVRVFTVDK 289 (745)
T ss_pred Ee---cCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEecc---CceEEEEEecc
Confidence 73 2567889999999999999976 77777776777999999999998777664 69999999875
No 71
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-33 Score=206.38 Aligned_cols=243 Identities=25% Similarity=0.470 Sum_probs=201.3
Q ss_pred cccEEEEEECCC-CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeCCCcEEEE
Q 020798 23 LRAISSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLW 100 (321)
Q Consensus 23 ~~~v~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iw 100 (321)
...+..++|+++ .+.+++++.||.+++||+. .+..|+..++.|++.|.++.|++. ++.+++++.|++|++|
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~-------~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW 132 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLT-------MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLW 132 (311)
T ss_pred ccceeEeeecCCCcceEEEEecCceEEEeccC-------CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEee
Confidence 567889999985 4678899999999999843 455689999999999999999985 5677888999999999
Q ss_pred ecCCcceeeeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc-CCCEEEEEeCC
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-DGTMIVTSSYD 178 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 178 (321)
+...+..+.++.+|..-|....|+|. .+.+++++.|+.+++||++.......++.|...+.++.|+. +...+++++.|
T Consensus 133 ~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd 212 (311)
T KOG0277|consen 133 DPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVD 212 (311)
T ss_pred cCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCC
Confidence 99988889999999999999999995 68999999999999999986544445889999999999997 45678899999
Q ss_pred CeEEEEeCCCCceeeeeccCCCCCeEEEEEccC-CCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCceeEEEeEEEecC
Q 020798 179 GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTG-KILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
+.|+.||+++-+.....+..++..|..++|+|. ...|++++.|-+++|||...+ ..+..+..|+.-.. ...++..+
T Consensus 213 ~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~--g~Dws~~~ 290 (311)
T KOG0277|consen 213 NLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVC--GLDWSLFD 290 (311)
T ss_pred ceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEe--cccccccc
Confidence 999999999765544445678888999999996 456788999999999998754 34555555544332 33444557
Q ss_pred CeEEEEeCCCCeEEEEEc
Q 020798 257 GKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~ 274 (321)
+.++|+.+.|+.++||+-
T Consensus 291 ~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 291 PGQVASTGWDELLYVWNP 308 (311)
T ss_pred Cceeeecccccceeeecc
Confidence 889999999999999983
No 72
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.5e-31 Score=201.78 Aligned_cols=274 Identities=20% Similarity=0.312 Sum_probs=219.1
Q ss_pred CcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 22 HLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 22 h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
-.+.|.+++||| ...+++.+|.|++|++|++..-- ...+ .....|.++|.+++|+.||..+++|+.|+++++|
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-----~~~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-----QLVP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLW 99 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCC-----cccc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEE
Confidence 457899999999 45567799999999999987521 1112 3345688999999999999999999999999999
Q ss_pred ecCCcceeeeeecCcccEEEEEECCCCC--EEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCC
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQSN--MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
|+.+++ ...+..|.++|.++.|-+... .|++|++|.+|+.||.+...++.++... ..+.++.. ...+++++..+
T Consensus 100 DL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP-eRvYa~Dv--~~pm~vVata~ 175 (347)
T KOG0647|consen 100 DLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLP-ERVYAADV--LYPMAVVATAE 175 (347)
T ss_pred EccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeecc-ceeeehhc--cCceeEEEecC
Confidence 999996 566788999999999987665 7999999999999999998888877653 45555543 34578888899
Q ss_pred CeEEEEeCCCCce-eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC--cEEEEEeccCC------ceeEEE
Q 020798 179 GLCRIWDASTGHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG--KILKTYTGHTN------SKYCIS 249 (321)
Q Consensus 179 g~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~------~~~~~~ 249 (321)
..|.+|+++++.. .+.+.......+.+++..++....+.|+.+|.+-|..+..+ +.-..+..|.. .++.+.
T Consensus 176 r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVN 255 (347)
T KOG0647|consen 176 RHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVN 255 (347)
T ss_pred CcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEec
Confidence 9999999976532 23333334455778888888888899999999999988775 33445555542 266666
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
...+.|.-..|+|+++||++.+||-..+..++..+.|..+|++.+|+.+|.++|-+
T Consensus 256 si~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 256 SIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred ceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 66555667789999999999999998888888888899999999999999999876
No 73
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-31 Score=228.00 Aligned_cols=295 Identities=24% Similarity=0.453 Sum_probs=227.8
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
-.++...+.+|.++|..++|+|++.++++|+.|..|++|+... ...+.++.+|-+.|+.+.|++.-.+++++
T Consensus 40 M~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~--------rrclftL~GHlDYVRt~~FHheyPWIlSA 111 (1202)
T KOG0292|consen 40 MGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT--------RRCLFTLLGHLDYVRTVFFHHEYPWILSA 111 (1202)
T ss_pred hhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc--------ceehhhhccccceeEEeeccCCCceEEEc
Confidence 3445566789999999999999999999999999999997643 45677889999999999999999999999
Q ss_pred eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC--------C----------------
Q 020798 92 SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT--------G---------------- 147 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~--------~---------------- 147 (321)
|+|.+|+||+..+.+++..+.||.-+|.|..|+|....+++++-|.+||+||+.. +
T Consensus 112 SDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLf 191 (1202)
T KOG0292|consen 112 SDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLF 191 (1202)
T ss_pred cCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhc
Confidence 9999999999999999999999999999999999999999999999999999741 1
Q ss_pred -----EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce-eeeeccCCCCCeEEEEEccCCCEEEEEecC
Q 020798 148 -----KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 148 -----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d 221 (321)
-....+.+|...|.-++|+|.-.++++|+.|..|++|.....+. .......|...|+++-|+|....+++.+.|
T Consensus 192 g~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsED 271 (1202)
T KOG0292|consen 192 GQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSED 271 (1202)
T ss_pred CCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCC
Confidence 01134567888999999999999999999999999998764332 112233566789999999999999999999
Q ss_pred CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC--------------------------CeEEEEEcc
Q 020798 222 NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED--------------------------SCVYLWELQ 275 (321)
Q Consensus 222 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------------------------g~i~vwd~~ 275 (321)
++|+|||+...+.++.+......-++++. .|...++|+|-.. ..|+.+|+.
T Consensus 272 ksirVwDm~kRt~v~tfrrendRFW~laa---hP~lNLfAAgHDsGm~VFkleRErpa~~v~~n~LfYvkd~~i~~~d~~ 348 (1202)
T KOG0292|consen 272 KSIRVWDMTKRTSVQTFRRENDRFWILAA---HPELNLFAAGHDSGMIVFKLERERPAYAVNGNGLFYVKDRFIRSYDLR 348 (1202)
T ss_pred ccEEEEecccccceeeeeccCCeEEEEEe---cCCcceeeeecCCceEEEEEcccCceEEEcCCEEEEEccceEEeeecc
Confidence 99999999999888888654444444332 3455555544332 333334443
Q ss_pred cce--EEEEecCC---CCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 276 SRK--VVQKLEGH---TDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 276 ~~~--~~~~~~~h---~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
+.+ .+..++.. -.+..+++++|....+..++.-.++.-.++.
T Consensus 349 t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ 395 (1202)
T KOG0292|consen 349 TQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQ 395 (1202)
T ss_pred ccccceeEeccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEE
Confidence 322 12223322 2678899999997765555432345544443
No 74
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=5.1e-30 Score=187.58 Aligned_cols=292 Identities=24% Similarity=0.416 Sum_probs=228.9
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCC----CC--CCCC-cccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNS----DS--TPPS-PLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~----~~--~~~~-~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
....|.+++|+|.|.+.|+|++..++++-..-..... +. .|+. ....-+.|++.|+|.+|+|+|+++++|++|
T Consensus 31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd 110 (350)
T KOG0641|consen 31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND 110 (350)
T ss_pred chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence 4568999999999999999999999988644332211 00 1111 112234688999999999999999999999
Q ss_pred CcEEEEecCCccee-----eeeecCcccEEEEEECCC----CCEEEEee-CCCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 95 KTIRLWDVPTATCL-----KTLIGHTNYVFCVNFNPQ----SNMIVSGA-FDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 95 ~~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~----~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
..|++.-+...++. ..+.-|.+.|..++|-.+ +..|++++ .|..|++=|...++....+.+|.+.|.++
T Consensus 111 k~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal- 189 (350)
T KOG0641|consen 111 KTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL- 189 (350)
T ss_pred ceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE-
Confidence 99999766543321 245568899999999643 34566654 46677777888888888999999988776
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC------CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD------ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
++-++-.+++|+.|.+|++||++-..++..+-.. ....+..++..|.|++|++|..|....+||++.++.++.+
T Consensus 190 yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f 269 (350)
T KOG0641|consen 190 YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRF 269 (350)
T ss_pred EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeee
Confidence 3446789999999999999999988777665322 1246888999999999999999999999999999999999
Q ss_pred eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc----eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEE
Q 020798 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR----KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~ 314 (321)
..|...+.|+.+ .|...++++++.|..|++=|++.. -.+.....|.+.+..+.|+|..-.+++.|. |+++.
T Consensus 270 ~phsadir~vrf---sp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssa--dkt~t 344 (350)
T KOG0641|consen 270 HPHSADIRCVRF---SPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSA--DKTAT 344 (350)
T ss_pred CCCccceeEEEe---CCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccC--cceEE
Confidence 999887666543 477899999999999999998642 123445669999999999999988988884 58999
Q ss_pred Ecccc
Q 020798 315 IWTQE 319 (321)
Q Consensus 315 iw~~~ 319 (321)
+|.+.
T Consensus 345 lwa~~ 349 (350)
T KOG0641|consen 345 LWALN 349 (350)
T ss_pred EeccC
Confidence 99764
No 75
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=3e-31 Score=227.74 Aligned_cols=221 Identities=17% Similarity=0.335 Sum_probs=181.5
Q ss_pred eccCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCCC
Q 020798 18 TLNGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDDK 95 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~ 95 (321)
.+.||.+.|++++|+| ++++|++|+.|+.|++|++...... .....++..+.+|...|.+++|+|++ ++|++++.|+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~-~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg 148 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT-QNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM 148 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc-cccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC
Confidence 3679999999999999 8899999999999999998643211 11224566788999999999999985 6899999999
Q ss_pred cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCC-eeEEEEccCCCEEEE
Q 020798 96 TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVT 174 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~ 174 (321)
.|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|... ...+.|.+++..+++
T Consensus 149 tVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt 228 (493)
T PTZ00421 149 VVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIIT 228 (493)
T ss_pred EEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEE
Confidence 9999999999888888899999999999999999999999999999999999988888888764 346788888877776
Q ss_pred Ee----CCCeEEEEeCCCCceeee-eccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcEEEEEe
Q 020798 175 SS----YDGLCRIWDASTGHCMKT-LIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 175 ~~----~dg~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~~~~~~ 239 (321)
++ .|+.|++||+++...... ........+....|++++++|++++ .|+.|++||+.+++++....
T Consensus 229 ~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~ 299 (493)
T PTZ00421 229 LGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSS 299 (493)
T ss_pred EecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEee
Confidence 54 478999999986543222 2222334455667899999998887 59999999999988776543
No 76
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-31 Score=222.45 Aligned_cols=273 Identities=25% Similarity=0.426 Sum_probs=219.1
Q ss_pred EEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcce
Q 020798 28 SVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC 107 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 107 (321)
-+.|+ ..+.||+|. ...+.+|+-.... .......+...|+++.|+++|.+|++|..+|.|.|||....+.
T Consensus 182 lldWs-s~n~laVal-g~~vylW~~~s~~--------v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~ 251 (484)
T KOG0305|consen 182 LLDWS-SANVLAVAL-GQSVYLWSASSGS--------VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKK 251 (484)
T ss_pred Hhhcc-cCCeEEEEe-cceEEEEecCCCc--------eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccc
Confidence 35677 455677664 5678889654321 1122223378899999999999999999999999999999888
Q ss_pred eeeeec-CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE-EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEe
Q 020798 108 LKTLIG-HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV-LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185 (321)
Q Consensus 108 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d 185 (321)
+..+.+ |...|-+++|+ +..+.+|+.++.|..+|++..+.... +..|...|..+.|++++.++++|+.|+.+.+||
T Consensus 252 ~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd 329 (484)
T KOG0305|consen 252 TRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWD 329 (484)
T ss_pred cccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEecc
Confidence 888888 99999999998 57899999999999999988765444 788999999999999999999999999999999
Q ss_pred CCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEe--cCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEE
Q 020798 186 ASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGT--LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS 262 (321)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (321)
....+....+ ..|...|..++|+| ....||+|+ .|+.|++||..+++.+....... ..-...|.....+++.+
T Consensus 330 ~~~~~p~~~~-~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgs---QVcsL~Wsk~~kEi~st 405 (484)
T KOG0305|consen 330 GLSPEPKFTF-TEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGS---QVCSLIWSKKYKELLST 405 (484)
T ss_pred CCCccccEEE-eccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCC---ceeeEEEcCCCCEEEEe
Confidence 9666555544 46778899999999 456777764 69999999999998888764321 11223344443444443
Q ss_pred -eCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 263 -GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 263 -~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
|..++.|.||+..+.+.+..+.+|..+|..++++|||..+++|+.| .++++|+.
T Consensus 406 hG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~D--ETlrfw~~ 460 (484)
T KOG0305|consen 406 HGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAAD--ETLRFWNL 460 (484)
T ss_pred cCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEeccc--CcEEeccc
Confidence 4577899999999999999999999999999999999999999954 78999986
No 77
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.2e-31 Score=224.33 Aligned_cols=279 Identities=25% Similarity=0.444 Sum_probs=230.9
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...|+|++-+|+...||+|..||.|++|++... .+...+.+|+..|+++.|...|..|++|+.|+.|.+||+
T Consensus 65 k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~--------~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDl 136 (888)
T KOG0306|consen 65 KAEVTCLRSSDDILLLAVGYADGSVQIFSLESE--------EILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDL 136 (888)
T ss_pred cceEEEeeccCCcceEEEEecCceEEeeccCCC--------ceeeeecccccceEEEEEcccCceEeecCCCccEEEEEe
Confidence 358999999999999999999999999987532 456678899999999999999999999999999999999
Q ss_pred CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEE
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 182 (321)
-...-...+.+|.+.|+..-|....+++++.+.|+.|++||+.+..+..+.-.|.+.++.+++.+ +.+++++.|+.++
T Consensus 137 V~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~ 214 (888)
T KOG0306|consen 137 VGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE--KLLVTAGTDSELK 214 (888)
T ss_pred ccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec--ceEEEEecCCceE
Confidence 87777888999999999988888788999999999999999999999999999999999999987 6889999999999
Q ss_pred EEeCCC----------------C--------ceeee----------------------e---------------------
Q 020798 183 IWDAST----------------G--------HCMKT----------------------L--------------------- 195 (321)
Q Consensus 183 ~~d~~~----------------~--------~~~~~----------------------~--------------------- 195 (321)
+|++.. | +.+.. +
T Consensus 215 v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka 294 (888)
T KOG0306|consen 215 VWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKA 294 (888)
T ss_pred EEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhc
Confidence 998810 0 00000 0
Q ss_pred c--------------------------------------------------------------------------cCCCC
Q 020798 196 I--------------------------------------------------------------------------DDENP 201 (321)
Q Consensus 196 ~--------------------------------------------------------------------------~~~~~ 201 (321)
. ..|..
T Consensus 295 ~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~ 374 (888)
T KOG0306|consen 295 ETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRS 374 (888)
T ss_pred cccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchh
Confidence 0 00111
Q ss_pred CeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE
Q 020798 202 PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ 281 (321)
Q Consensus 202 ~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (321)
.|..++++.+...++ ++..+.+++|+..+.+.++++... +.+.+.|. |.+++++.|...|.+.+||+.+..++.
T Consensus 375 dVRsl~vS~d~~~~~-Sga~~SikiWn~~t~kciRTi~~~----y~l~~~Fv-pgd~~Iv~G~k~Gel~vfdlaS~~l~E 448 (888)
T KOG0306|consen 375 DVRSLCVSSDSILLA-SGAGESIKIWNRDTLKCIRTITCG----YILASKFV-PGDRYIVLGTKNGELQVFDLASASLVE 448 (888)
T ss_pred heeEEEeecCceeee-ecCCCcEEEEEccCcceeEEeccc----cEEEEEec-CCCceEEEeccCCceEEEEeehhhhhh
Confidence 133344554443333 344678999999999999998653 44555554 678999999999999999999999999
Q ss_pred EecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 282 KLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 282 ~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+++|.+.|++++.+||+..+++||. |.+|++||.+
T Consensus 449 ti~AHdgaIWsi~~~pD~~g~vT~sa--DktVkfWdf~ 484 (888)
T KOG0306|consen 449 TIRAHDGAIWSISLSPDNKGFVTGSA--DKTVKFWDFK 484 (888)
T ss_pred hhhccccceeeeeecCCCCceEEecC--CcEEEEEeEE
Confidence 99999999999999999999999995 5799999975
No 78
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-32 Score=203.10 Aligned_cols=252 Identities=28% Similarity=0.474 Sum_probs=214.7
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
..+-.-++.||+++|....++.+..+.|+++.|-+.++|+--.. ..+..+ .|+.-|..++|+.|.++|++|
T Consensus 48 tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tg--------delhsf-~hkhivk~~af~~ds~~lltg 118 (334)
T KOG0278|consen 48 TGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTG--------DELHSF-EHKHIVKAVAFSQDSNYLLTG 118 (334)
T ss_pred CCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhh--------hhhhhh-hhhheeeeEEecccchhhhcc
Confidence 34456788999999999999999999999999999999975332 223333 588899999999999999999
Q ss_pred eCCCcEEEEecCCcc-eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC
Q 020798 92 SDDKTIRLWDVPTAT-CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
+.+.-++|||+...+ +...+.+|++.|..+.|....+.|+++..|++||+||.+++..++.+.. +.+|+++.++++|+
T Consensus 119 g~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~-~s~VtSlEvs~dG~ 197 (334)
T KOG0278|consen 119 GQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF-NSPVTSLEVSQDGR 197 (334)
T ss_pred chHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec-CCCCcceeeccCCC
Confidence 999999999997653 4567889999999999999889999999999999999999999988864 67899999999997
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE-eccCCceeEEE
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY-TGHTNSKYCIS 249 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~ 249 (321)
++ +....+.|.+||..+...++... ....|.+..++|+...+++|+.|..++.||..++..+..+ .+|.+++.|+.
T Consensus 198 il-Tia~gssV~Fwdaksf~~lKs~k--~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVr 274 (334)
T KOG0278|consen 198 IL-TIAYGSSVKFWDAKSFGLLKSYK--MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVR 274 (334)
T ss_pred EE-EEecCceeEEeccccccceeecc--CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEE
Confidence 65 55566789999999877766653 3456888999999999999999999999999999999987 88888877765
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceE
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKV 279 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (321)
+ .|+|...++|++||+|++|.+..++.
T Consensus 275 F---SPdGE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 275 F---SPDGELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred E---CCCCceeeccCCCceEEEEEecCCCc
Confidence 3 48999999999999999999865543
No 79
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.8e-30 Score=198.28 Aligned_cols=260 Identities=22% Similarity=0.388 Sum_probs=209.4
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC--EEEEEeCCCc
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR--FLVSASDDKT 96 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~--~l~~~~~d~~ 96 (321)
+..|.+.++++|.+ |.++|+||.|.+|.+||+... ..+..+-.|.+.|+++.|.+.-. .|++|+.||.
T Consensus 39 ~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~--------~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~ 108 (362)
T KOG0294|consen 39 FSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKR--------KQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGH 108 (362)
T ss_pred ccccccceeEEEec--ceeEeccCCCCcEEEEeccch--------hhhcceeccccceEEEEecCCcchhheeeecCCCc
Confidence 46899999999975 899999999999999998642 23456678999999999998764 8999999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS 176 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 176 (321)
|.+|+.....++..+++|...|+.++.+|.++.-++.+.|+.+++|++-.|+.-...+. ....+.+.|+|.|.+|+.+.
T Consensus 109 i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L-~~~at~v~w~~~Gd~F~v~~ 187 (362)
T KOG0294|consen 109 IIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL-KNKATLVSWSPQGDHFVVSG 187 (362)
T ss_pred EEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeecc-CCcceeeEEcCCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999988875554443 23345699999999998887
Q ss_pred CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC
Q 020798 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 177 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
.++ |-+|.+.+......+... ..+.++.|. ++..+++|..|+.|++||..+..+...+.+|...+..+. .+..++
T Consensus 188 ~~~-i~i~q~d~A~v~~~i~~~--~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~-~~~~~~ 262 (362)
T KOG0294|consen 188 RNK-IDIYQLDNASVFREIENP--KRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIA-SYTNPE 262 (362)
T ss_pred ccE-EEEEecccHhHhhhhhcc--ccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhheeeeE-EEecCC
Confidence 764 778988876655544322 234455554 566889999999999999999899999999988776554 344567
Q ss_pred CeEEEEeCCCCeEEEEEcccc-----eEEEEecCCCCCeEEEEe
Q 020798 257 GKYIVSGSEDSCVYLWELQSR-----KVVQKLEGHTDPVISVAS 295 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~-----~~~~~~~~h~~~v~~~~~ 295 (321)
+.+|+++++||.|+|||++.. +++..+.. ..+++|+..
T Consensus 263 ~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~ 305 (362)
T KOG0294|consen 263 HEYLVTASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV 305 (362)
T ss_pred ceEEEEeccCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence 899999999999999999765 34444433 456666654
No 80
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.4e-31 Score=203.67 Aligned_cols=292 Identities=24% Similarity=0.422 Sum_probs=235.5
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
+++.+.|.||..+|..++-.....++.+++.|.+.++|.++. ...+..+.+|.+.|++++|++.+.++++++
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Es--------g~CL~~Y~GH~GSVNsikfh~s~~L~lTaS 209 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLES--------GACLATYTGHTGSVNSIKFHNSGLLLLTAS 209 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecc--------ccceeeecccccceeeEEeccccceEEEcc
Confidence 457788999999999999988888999999999999998754 356788999999999999999999999999
Q ss_pred CCCcEEEEec------CCc----------------------------------ceeeeeecCcccEEEEEECCCCCEEEE
Q 020798 93 DDKTIRLWDV------PTA----------------------------------TCLKTLIGHTNYVFCVNFNPQSNMIVS 132 (321)
Q Consensus 93 ~d~~i~iwd~------~~~----------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~ 132 (321)
.|++..||.. ..+ .++..+.+|.+.|.++.|-..+.++++
T Consensus 210 GD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vT 289 (481)
T KOG0300|consen 210 GDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVT 289 (481)
T ss_pred CCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeee
Confidence 9999999962 110 023356789999999999999999999
Q ss_pred eeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC
Q 020798 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG 212 (321)
Q Consensus 133 ~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g 212 (321)
+++|.+..+||+++++.+..+.+|....+.++-+|..+++++.+.|.+.++||.+..-.....+..+...++++.|..+.
T Consensus 290 aSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd 369 (481)
T KOG0300|consen 290 ASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD 369 (481)
T ss_pred eeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999985433344556777889999998776
Q ss_pred CEEEEEecCCeEEEEeCCCCc-EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE----EecCCC
Q 020798 213 KFILVGTLDNTLRLWNYSTGK-ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ----KLEGHT 287 (321)
Q Consensus 213 ~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~h~ 287 (321)
+ +++|+.|.+|++||+++.+ ++..+... .+...+.. ...+..++.--.+..|++||+...++.. .-.+|.
T Consensus 370 ~-vVSgSDDrTvKvWdLrNMRsplATIRtd-S~~NRvav---s~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHr 444 (481)
T KOG0300|consen 370 R-VVSGSDDRTVKVWDLRNMRSPLATIRTD-SPANRVAV---SKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHR 444 (481)
T ss_pred c-eeecCCCceEEEeeeccccCcceeeecC-CccceeEe---ecCCceEEeccCCceEEEEecCCCccccCCcccccccc
Confidence 4 7789999999999998754 45555432 22222322 2446688888889999999997654321 235798
Q ss_pred CCeEEEEecCCC--ceEEEEeecCCccEEEcccc
Q 020798 288 DPVISVASHPTE--NIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 288 ~~v~~~~~~p~~--~~l~s~~~d~~~~i~iw~~~ 319 (321)
.-|.+++|..+. .-|.++++| +++.=|++.
T Consensus 445 RMV~c~AW~eehp~cnLftcGFD--R~v~gW~in 476 (481)
T KOG0300|consen 445 RMVTCCAWLEEHPACNLFTCGFD--RMVAGWKIN 476 (481)
T ss_pred eeeeeeeccccCccccccccccc--ceeeeeEec
Confidence 899999996442 345566665 788888764
No 81
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=3.8e-31 Score=197.00 Aligned_cols=243 Identities=23% Similarity=0.416 Sum_probs=205.1
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceee--eeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEe
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK--TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWD 143 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd 143 (321)
+.+.+|.+.+.+++|+.+|..|++|+.|+++.+|+++..+... ...+|.+.|-.++|+|. ...|++++.|.+|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 5567899999999999999999999999999999998765433 34689988999999875 56899999999999999
Q ss_pred cCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCe
Q 020798 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~ 223 (321)
++.+++...+......+ -+.|+|+|+++++++.|..|.+.|.++.+.+.... ....+..+.|+-++.+++.....|.
T Consensus 94 ~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~--~~~e~ne~~w~~~nd~Fflt~GlG~ 170 (313)
T KOG1407|consen 94 IRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ--FKFEVNEISWNNSNDLFFLTNGLGC 170 (313)
T ss_pred eccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehhc--ccceeeeeeecCCCCEEEEecCCce
Confidence 99999988876554444 57899999999999999999999999877655432 2334667888888888888888899
Q ss_pred EEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEE
Q 020798 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 303 (321)
|.|......+++..++.|.....|+. + .|+|++||+|+.|..+.+||+...-++..+..+.-||+.++|+.+|++||
T Consensus 171 v~ILsypsLkpv~si~AH~snCicI~--f-~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lA 247 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAHPSNCICIE--F-DPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLA 247 (313)
T ss_pred EEEEeccccccccccccCCcceEEEE--E-CCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceee
Confidence 99999999999999999986655443 3 47999999999999999999998878888888999999999999999999
Q ss_pred EEeecCCccEEEcc
Q 020798 304 SGALDNDRTVKIWT 317 (321)
Q Consensus 304 s~~~d~~~~i~iw~ 317 (321)
+||+| ..|-|=+
T Consensus 248 SaSED--h~IDIA~ 259 (313)
T KOG1407|consen 248 SASED--HFIDIAE 259 (313)
T ss_pred ccCcc--ceEEeEe
Confidence 99965 5565543
No 82
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.4e-31 Score=211.12 Aligned_cols=253 Identities=28% Similarity=0.447 Sum_probs=205.7
Q ss_pred CCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc---ceeeeeecCcccEEEEEECCCCCEEEEeeCCCc
Q 020798 62 PPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA---TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138 (321)
Q Consensus 62 ~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 138 (321)
|....+.+..|.+.|.-+.||++|++||+++.|.+..+|.+... +..+++.+|..+|..+.|+||.++|++|+.+..
T Consensus 213 p~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~ 292 (519)
T KOG0293|consen 213 PSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEV 292 (519)
T ss_pred CchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHh
Confidence 34456678899999999999999999999999999999987543 346788999999999999999999999999999
Q ss_pred EEEEecCCCEEEEEEeC-CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEE
Q 020798 139 VRIWDVKTGKCLKVLPA-HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 139 i~~wd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
+.+||..+|.+...++. +...+.+++|.|||..+++|+.|+.+..||+.... ...+.....+.+..+++.+||+++++
T Consensus 293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dgk~vl~ 371 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDGKYVLL 371 (519)
T ss_pred eeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCCcEEEE
Confidence 99999999988777653 35778999999999999999999999999987543 33333334466889999999999999
Q ss_pred EecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCC--CeEEEEe
Q 020798 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD--PVISVAS 295 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~ 295 (321)
.+.|..|++|+..+.........+. + +.....+.+++++++.=.+..+++||++..+++.++.||.. .|..-+|
T Consensus 372 v~~d~~i~l~~~e~~~dr~lise~~-~---its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCF 447 (519)
T KOG0293|consen 372 VTVDKKIRLYNREARVDRGLISEEQ-P---ITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCF 447 (519)
T ss_pred EecccceeeechhhhhhhccccccC-c---eeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEecc
Confidence 9999999999987654443333332 2 22333347899999999999999999999999999999864 4555556
Q ss_pred cCC-CceEEEEeecCCccEEEcccccC
Q 020798 296 HPT-ENIIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 296 ~p~-~~~l~s~~~d~~~~i~iw~~~~~ 321 (321)
... ..++|+||+ |+.|+||+.+.+
T Consensus 448 gg~~~~fiaSGSE--D~kvyIWhr~sg 472 (519)
T KOG0293|consen 448 GGGNDKFIASGSE--DSKVYIWHRISG 472 (519)
T ss_pred CCCCcceEEecCC--CceEEEEEccCC
Confidence 544 488999995 478999997653
No 83
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.9e-32 Score=211.69 Aligned_cols=284 Identities=19% Similarity=0.344 Sum_probs=226.8
Q ss_pred eeeeccCCcccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 15 LTQTLNGHLRAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
+...|.||.++|.|++=+|.. ..+|+|+.||.|++|++... ..+..+..|.+.|..|++.. ..++++++
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR--------~~~~~f~AH~G~V~Gi~v~~--~~~~tvgd 127 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQR--------ECIRTFKAHEGLVRGICVTQ--TSFFTVGD 127 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhh--------hhhheeecccCceeeEEecc--cceEEecC
Confidence 356679999999999999987 78999999999999998642 34678889999999999987 56889999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC-EE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT-MI 172 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 172 (321)
|.+|+.|.+... +.+++.+ ...+..+..+..++.+++||. .|.+||.+...+++.+.-..+.+.++.|+|..+ .|
T Consensus 128 DKtvK~wk~~~~-p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsIL 203 (433)
T KOG0268|consen 128 DKTVKQWKIDGP-PLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSIL 203 (433)
T ss_pred CcceeeeeccCC-cceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchhe
Confidence 999999997663 4455443 345667777777888999885 589999988888888887778899999999766 56
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCceeEEEeE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG-KILKTYTGHTNSKYCISST 251 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~ 251 (321)
++|+.|+.|.+||++.+.+++.+.... ..+.++|+|.+-.++++.+|..++.||++.. .++..+.+|...+..+ .
T Consensus 204 as~~sDrsIvLyD~R~~~Pl~KVi~~m--RTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dV--d 279 (433)
T KOG0268|consen 204 ASCASDRSIVLYDLRQASPLKKVILTM--RTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDV--D 279 (433)
T ss_pred eeeccCCceEEEecccCCccceeeeec--cccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEe--c
Confidence 677799999999999988877664433 3467899997777888999999999999865 3566677776654333 3
Q ss_pred EEecCCeEEEEeCCCCeEEEEEcccceEEEEecC-CCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG-HTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
| .|.|+-+++|+.|.+||||.++.+.....+.. -.+.|.++.|+-|.+++++|| +|+.|++|...
T Consensus 280 f-sptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGS--dd~nvRlWka~ 345 (433)
T KOG0268|consen 280 F-SPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGS--DDGNVRLWKAK 345 (433)
T ss_pred c-CCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecC--CCcceeeeecc
Confidence 3 47899999999999999999976643222211 135799999999999999998 45889999864
No 84
>PTZ00420 coronin; Provisional
Probab=100.00 E-value=1.2e-29 Score=219.10 Aligned_cols=226 Identities=19% Similarity=0.323 Sum_probs=178.5
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCE--------EEEEEeCCCCCee
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGK--------CLKVLPAHSDPVT 161 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~--------~~~~~~~~~~~v~ 161 (321)
|+.++.+++|+......+..+.+|...|.+++|+|+ +++|++|+.|+.|++||+.++. +...+..|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 567889999998877778888999999999999997 7899999999999999997542 2345678999999
Q ss_pred EEEEccCCCE-EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 020798 162 AVDFNRDGTM-IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 162 ~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 240 (321)
+++|+|++.. +++++.|++|++||+++++....+. +...+.+++|+|+|.+|++++.|+.|+|||+++++.+..+.+
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~--~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~g 207 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN--MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHI 207 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe--cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 9999998875 5688999999999999887665543 345689999999999999999999999999999999999988
Q ss_pred cCCceeEEEeE--EEecCCeEEEEeCCC----CeEEEEEccc-ceEEEEe--cCCCCCeEEEEecCCCceEEEEeecCCc
Q 020798 241 HTNSKYCISST--FSVTNGKYIVSGSED----SCVYLWELQS-RKVVQKL--EGHTDPVISVASHPTENIIASGALDNDR 311 (321)
Q Consensus 241 ~~~~~~~~~~~--~~~~~~~~l~~~~~d----g~i~vwd~~~-~~~~~~~--~~h~~~v~~~~~~p~~~~l~s~~~d~~~ 311 (321)
|.+........ ...+++.+|++++.| +.|+|||++. .+.+..+ ..+.+.+......+++.++++|+ +|+
T Consensus 208 H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGk--GD~ 285 (568)
T PTZ00420 208 HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGK--GDG 285 (568)
T ss_pred ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEE--CCC
Confidence 87654322211 123567788877666 4799999985 4455443 33444455555566688999987 568
Q ss_pred cEEEccccc
Q 020798 312 TVKIWTQEK 320 (321)
Q Consensus 312 ~i~iw~~~~ 320 (321)
.|++|+...
T Consensus 286 tIr~~e~~~ 294 (568)
T PTZ00420 286 NCRYYQHSL 294 (568)
T ss_pred eEEEEEccC
Confidence 999999753
No 85
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-30 Score=216.46 Aligned_cols=241 Identities=26% Similarity=0.412 Sum_probs=208.1
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccc-ccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTG-HEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
+...|+++.|+++|++||+|..+|.+.+||..... .+..+.+ |...|-+++|. +..+.+|+.|+.|..+
T Consensus 216 ~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k--------~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~ 285 (484)
T KOG0305|consen 216 GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQK--------KTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNH 285 (484)
T ss_pred CCCceEEEEECCCCCEEEEeecCCeEEEEehhhcc--------ccccccCCcCceeEEEecc--CceEEEecCCCcEEEE
Confidence 47899999999999999999999999999976533 2344555 89999999998 5678999999999999
Q ss_pred ecCCcceeee-eecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC-CCEEEEEe--
Q 020798 101 DVPTATCLKT-LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD-GTMIVTSS-- 176 (321)
Q Consensus 101 d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~-- 176 (321)
|++..+.... +.+|...|..+.|++|++++++|+.|+.+.+||....++...+..|..+|.+++|+|- ..+||+|+
T Consensus 286 dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs 365 (484)
T KOG0305|consen 286 DVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGS 365 (484)
T ss_pred EEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCC
Confidence 9988765544 7889999999999999999999999999999999888888899999999999999995 45777764
Q ss_pred CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE--ecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG--TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 177 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
.|+.|++||..++..+..+. ....|..+.|++..+.|+++ ..++.|.||+..+.+.+..+.+|...+..+ ...
T Consensus 366 ~D~~i~fwn~~~g~~i~~vd--tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~l---a~S 440 (484)
T KOG0305|consen 366 ADRCIKFWNTNTGARIDSVD--TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYL---ALS 440 (484)
T ss_pred cccEEEEEEcCCCcEecccc--cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEE---EEC
Confidence 69999999999998777663 45679999999998877764 467799999999999999999998875443 345
Q ss_pred cCCeEEEEeCCCCeEEEEEcccc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQSR 277 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~ 277 (321)
|||..+++|+.|.++++|++...
T Consensus 441 Pdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 441 PDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCCCEEEEecccCcEEeccccCC
Confidence 89999999999999999998764
No 86
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-29 Score=192.96 Aligned_cols=248 Identities=22% Similarity=0.391 Sum_probs=203.0
Q ss_pred ccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC--CCcEEEEecC
Q 020798 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF--DETVRIWDVK 145 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~ 145 (321)
.+..-...|.++.|+++|.++++++.|.++++||..+++.++.+..+.-.+..++|....+.++.++. |.+|+..++.
T Consensus 9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~ 88 (311)
T KOG1446|consen 9 VFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH 88 (311)
T ss_pred ccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence 34445678999999999999999999999999999999999988877777888888777677666665 8899999999
Q ss_pred CCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEE
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~ 225 (321)
+.+.++.+++|...|.+++.+|-++.+++++.|++|++||++..++...+.... . ..++|+|.|-++|++...+.|+
T Consensus 89 dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-~--pi~AfDp~GLifA~~~~~~~Ik 165 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG-R--PIAAFDPEGLIFALANGSELIK 165 (311)
T ss_pred cCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC-C--cceeECCCCcEEEEecCCCeEE
Confidence 999999999999999999999999999999999999999999777655543222 2 3478999999999988888999
Q ss_pred EEeCCCC--cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCe---EEEEecCCCc
Q 020798 226 LWNYSTG--KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV---ISVASHPTEN 300 (321)
Q Consensus 226 i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v---~~~~~~p~~~ 300 (321)
+||++.- .+-..+.-.........-.-+.++|++|+.++..+.+++.|.-.|.++..+.++.+.- .+.+|.||++
T Consensus 166 LyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~ 245 (311)
T KOG1446|consen 166 LYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSK 245 (311)
T ss_pred EEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCc
Confidence 9999753 2333333222222223334445899999999999999999999999988888876543 6889999999
Q ss_pred eEEEEeecCCccEEEccccc
Q 020798 301 IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~~ 320 (321)
++.+|+ +||+|.+|+.+.
T Consensus 246 Fvl~gs--~dg~i~vw~~~t 263 (311)
T KOG1446|consen 246 FVLSGS--DDGTIHVWNLET 263 (311)
T ss_pred EEEEec--CCCcEEEEEcCC
Confidence 999997 569999999864
No 87
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.7e-31 Score=220.40 Aligned_cols=289 Identities=24% Similarity=0.492 Sum_probs=233.0
Q ss_pred CcccEE---EEEEC-CCCCEEEEecCCceEEEeeccccCCCCCCCCC-cccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 22 HLRAIS---SVKFS-HDGRLLASSSADKTLLTYSLSSISNSDSTPPS-PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 22 h~~~v~---~~~~s-~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
|...|. .+..+ |.++||.+||.||.|++|+...... .+.. .+..++.|.+-|+++....+++.|++++.|.+
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~---~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtT 96 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSN---EPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTT 96 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccC---CcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCce
Confidence 444555 45555 5778899999999999998765322 1122 36678889999999999999999999999999
Q ss_pred EEEEecCCc--ceeeeeecCcccEEEEEE-CCCCCEEEEeeCCCcEEEEecCCCEE--E--------EEEe-CCCCCeeE
Q 020798 97 IRLWDVPTA--TCLKTLIGHTNYVFCVNF-NPQSNMIVSGAFDETVRIWDVKTGKC--L--------KVLP-AHSDPVTA 162 (321)
Q Consensus 97 i~iwd~~~~--~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~~wd~~~~~~--~--------~~~~-~~~~~v~~ 162 (321)
|++|+.... -+...+..|..+|.|+++ .++...+++||.|+.|.+||+.++.. + ..+. ++..+|.+
T Consensus 97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYS 176 (735)
T KOG0308|consen 97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYS 176 (735)
T ss_pred EEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceee
Confidence 999998776 567788899999999999 77888899999999999999987732 1 1222 67788999
Q ss_pred EEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC
Q 020798 163 VDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242 (321)
Q Consensus 163 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 242 (321)
++.++.+..+++|+-.+.+++||.++.+.+..+. +|...|..+..++||..++++++||+|++||+...+.+.++..|.
T Consensus 177 LA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~ 255 (735)
T KOG0308|consen 177 LAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHK 255 (735)
T ss_pred eecCCcceEEEecCcccceEEeccccccceeeee-ccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEecc
Confidence 9999999999999999999999999988777765 677789999999999999999999999999999999999999998
Q ss_pred CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
..++.+. ..++-..+.+|+.||.|..=|+++......+.....+|..+..+.+.+-+=++. .|+.|+-|..+
T Consensus 256 e~VWaL~---~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtT--tds~I~rW~~~ 327 (735)
T KOG0308|consen 256 EGVWALQ---SSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTT--TDSSIKRWKLE 327 (735)
T ss_pred CceEEEe---eCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeee--ccccceecCCc
Confidence 8766543 347788999999999999999988644334444556777777764433322223 34678888765
No 88
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=2.3e-30 Score=202.19 Aligned_cols=253 Identities=28% Similarity=0.472 Sum_probs=205.9
Q ss_pred ceeeeeccCCcccEEEEEECCC---CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE
Q 020798 13 YTLTQTLNGHLRAISSVKFSHD---GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV 89 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~---g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~ 89 (321)
.....++.||.++|.+++|--. ...|++++.|.++++|........ ...+....||++.|-+++..++|..++
T Consensus 134 Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~----~~~~~~~~GHk~~V~sVsv~~sgtr~~ 209 (423)
T KOG0313|consen 134 GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENK----VKALKVCRGHKRSVDSVSVDSSGTRFC 209 (423)
T ss_pred CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhh----hhHHhHhcccccceeEEEecCCCCeEE
Confidence 3456778899999998888532 336999999999999977543322 223344569999999999999999999
Q ss_pred EEeCCCcEEEEecCC-------------------------cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 90 SASDDKTIRLWDVPT-------------------------ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 90 ~~~~d~~i~iwd~~~-------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
+|+.|..|++|+.+. ..++..+.+|.+.|.++.|++ ...++++++|.+|+.||+
T Consensus 210 SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDl 288 (423)
T KOG0313|consen 210 SGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDL 288 (423)
T ss_pred eecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEe
Confidence 999999999999321 123446789999999999998 678999999999999999
Q ss_pred CCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCC--ceeeeeccCCCCCeEEEEEccCCCE-EEEEecC
Q 020798 145 KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG--HCMKTLIDDENPPVSFVKFSPNGKF-ILVGTLD 221 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~~~d 221 (321)
.++.+...+.. .....+++++|..+++++|+.|..+++||.+++ ..+...+..|..-|..+.|+|...+ |++++.|
T Consensus 289 etg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D 367 (423)
T KOG0313|consen 289 ETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD 367 (423)
T ss_pred ecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecC
Confidence 99998877764 567899999999999999999999999999865 4455555677778999999996654 6778899
Q ss_pred CeEEEEeCCCCc-EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 222 NTLRLWNYSTGK-ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 222 ~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
+++++||+++.+ ++..+.+|...+.++. | .++..+++|+.|.+|+++.-.
T Consensus 368 ~t~klWDvRS~k~plydI~~h~DKvl~vd--W--~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 368 NTVKLWDVRSTKAPLYDIAGHNDKVLSVD--W--NEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred CeEEEEEeccCCCcceeeccCCceEEEEe--c--cCCceEEeccCcceEEEeccc
Confidence 999999999887 8888988876654443 3 368899999999999998753
No 89
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.98 E-value=9.5e-31 Score=219.64 Aligned_cols=281 Identities=18% Similarity=0.333 Sum_probs=221.3
Q ss_pred EEEEecCCceEEEeeccccCCCCC---C--------------CCC------------cccccccccccEEEEEECCCCCE
Q 020798 37 LLASSSADKTLLTYSLSSISNSDS---T--------------PPS------------PLQKFTGHEQGVSDLVFSSDSRF 87 (321)
Q Consensus 37 ~l~~~~~d~~v~~~~~~~~~~~~~---~--------------~~~------------~~~~~~~h~~~i~~~~~~~~~~~ 87 (321)
-+.||+.|++|++|++........ . +.. .....-....++++++.+|+|++
T Consensus 394 cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqh 473 (1080)
T KOG1408|consen 394 CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQH 473 (1080)
T ss_pred ceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcce
Confidence 488999999999999876211000 0 000 00011123457999999999999
Q ss_pred EEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCC---CCEEEEeeCCCcEEEEecCC-CEEEEEEeCCCCCeeEE
Q 020798 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ---SNMIVSGAFDETVRIWDVKT-GKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 88 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~v~~~ 163 (321)
||+|..-|++++|++...+....+.+|...|.|+.++.. .+.|++++.|..|++||... ..+++++..|...|+++
T Consensus 474 LAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsv 553 (1080)
T KOG1408|consen 474 LASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSV 553 (1080)
T ss_pred ecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEE
Confidence 999999999999999988888888999999999999853 46789999999999999854 35677889999999999
Q ss_pred EEccCC--CEEEEEeCCCeEEEEeCCC---Ccee-eeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEE
Q 020798 164 DFNRDG--TMIVTSSYDGLCRIWDAST---GHCM-KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT 237 (321)
Q Consensus 164 ~~~~~~--~~l~~~~~dg~i~~~d~~~---~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~ 237 (321)
.|...| ..+++++.|..|.+--.+. +... +.........+..++..|..+++++++.|..|+|||+.+++..+.
T Consensus 554 KFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~ 633 (1080)
T KOG1408|consen 554 KFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKS 633 (1080)
T ss_pred EEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeee
Confidence 998876 6789999998875432221 1111 111111223577899999999999999999999999999999999
Q ss_pred EeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 238 YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
|++.....-.+.-....|.|-|+|+.++|.++.++|+.+++++.++.||...|+.+.|.+|.++|++.+ +||.|.+|.
T Consensus 634 FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvs--gDgCIFvW~ 711 (1080)
T KOG1408|consen 634 FKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVS--GDGCIFVWK 711 (1080)
T ss_pred ecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeec--CCceEEEEE
Confidence 987554422233334457899999999999999999999999999999999999999999999999998 668999998
Q ss_pred cc
Q 020798 318 QE 319 (321)
Q Consensus 318 ~~ 319 (321)
+-
T Consensus 712 lp 713 (1080)
T KOG1408|consen 712 LP 713 (1080)
T ss_pred Cc
Confidence 63
No 90
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=3.1e-29 Score=191.01 Aligned_cols=270 Identities=20% Similarity=0.298 Sum_probs=214.1
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...|+++.|+|.++.|++++.||.+++|+.... .+...-.|..++.+++|.++ ..+++|+.||.|+.+|+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~---------~l~~~~~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dl 82 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN---------SLKLKFKHGAPLLDCAFADE-STIVTGGLDGQVRRYDL 82 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccch---------hhhhheecCCceeeeeccCC-ceEEEeccCceEEEEEe
Confidence 568999999999999999999999999987542 12223358899999999874 56889999999999999
Q ss_pred CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEE
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 182 (321)
.++.. ..+..|...+.|+.+++..+.+++|++|++|++||.+.......+.. ...|.++.. .++.|++|+.+..+.
T Consensus 83 n~~~~-~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v--~g~~LvVg~~~r~v~ 158 (323)
T KOG1036|consen 83 NTGNE-DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDV--SGNRLVVGTSDRKVL 158 (323)
T ss_pred cCCcc-eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEec--cCCEEEEeecCceEE
Confidence 98874 45667999999999999889999999999999999987554444433 346776665 477899999999999
Q ss_pred EEeCCCCceeee-eccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC----cEEEEEeccC------CceeEEEeE
Q 020798 183 IWDASTGHCMKT-LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG----KILKTYTGHT------NSKYCISST 251 (321)
Q Consensus 183 ~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~------~~~~~~~~~ 251 (321)
+||+++...... ........+.++++-|++.-+++++-||.+.+=.+... +....|+.|. .-.+++...
T Consensus 159 iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai 238 (323)
T KOG1036|consen 159 IYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAI 238 (323)
T ss_pred EEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEecee
Confidence 999997543322 12233456889999998888999999999877665544 3334455553 224556655
Q ss_pred EEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
.+.|-...||||+.||.|.+||+.+.+.+..+......|-+++|+-+|..||.|+
T Consensus 239 ~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 239 AFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred EeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEe
Confidence 5556667899999999999999999998888887778899999999999999986
No 91
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.98 E-value=7.5e-30 Score=195.33 Aligned_cols=291 Identities=20% Similarity=0.324 Sum_probs=209.9
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE-EeCCC
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS-ASDDK 95 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~-~~~d~ 95 (321)
..|+||.+.|++++|+.||++||+++.|+.|++|++.+....+-... .+.++ -+-.+.+.|+||-+-++. .-...
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~--R~nve--~dhpT~V~FapDc~s~vv~~~~g~ 155 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCI--RQNVE--YDHPTRVVFAPDCKSVVVSVKRGN 155 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHh--hcccc--CCCceEEEECCCcceEEEEEccCC
Confidence 45799999999999999999999999999999999987543222111 11111 123577899999775554 44555
Q ss_pred cEEEEecCCcce---e---------eeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEE
Q 020798 96 TIRLWDVPTATC---L---------KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 96 ~i~iwd~~~~~~---~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 163 (321)
++++|.+...+. . ..-..|.-.+..+-....+.+|++++.|..|.+|+++ |+.+..+......-+..
T Consensus 156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~a 234 (420)
T KOG2096|consen 156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDA 234 (420)
T ss_pred EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccce
Confidence 799998743321 0 1112355566677777778899999999999999998 88887777666666788
Q ss_pred EEccCCCEEEEEeCCCeEEEEeCC---CCc--eeee--eccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC-----
Q 020798 164 DFNRDGTMIVTSSYDGLCRIWDAS---TGH--CMKT--LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST----- 231 (321)
Q Consensus 164 ~~~~~~~~l~~~~~dg~i~~~d~~---~~~--~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~----- 231 (321)
+.+|+|+++++++-.-.+++|.+- .|. .+.+ .+..|...+..++|+++...+++.+.||++++||+.-
T Consensus 235 avSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~ 314 (420)
T KOG2096|consen 235 AVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAG 314 (420)
T ss_pred eeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecC
Confidence 999999999999998899999862 221 1111 1346778899999999999999999999999999742
Q ss_pred --CcEEEEEe--ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec-CCCCCeEEEEecCCCceEEEEe
Q 020798 232 --GKILKTYT--GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE-GHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 232 --~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
.+.++... .+......+. +...|+|+.||... ...+++|..+.++....++ .|...|.+++|+|+|+++|+++
T Consensus 315 qDpk~Lk~g~~pl~aag~~p~R-L~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG 392 (420)
T KOG2096|consen 315 QDPKILKEGSAPLHAAGSEPVR-LELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG 392 (420)
T ss_pred CCchHhhcCCcchhhcCCCceE-EEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec
Confidence 22333221 1111111122 22347888877643 4579999999887765554 4899999999999999999996
Q ss_pred ecCCccEEEcc
Q 020798 307 LDNDRTVKIWT 317 (321)
Q Consensus 307 ~d~~~~i~iw~ 317 (321)
|+.+++..
T Consensus 393 ---dr~vrv~~ 400 (420)
T KOG2096|consen 393 ---DRYVRVIR 400 (420)
T ss_pred ---ceeeeeec
Confidence 56777654
No 92
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.97 E-value=1.6e-29 Score=200.73 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=210.7
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
.++...|+||...|+.+.|+|+...+++++.|..|++|.... .........|..+|+.+..+|+|.||++++
T Consensus 251 ~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~--------~s~~~~~~~h~~~V~~ls~h~tgeYllsAs 322 (506)
T KOG0289|consen 251 NQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL--------SSEPTSSRPHEEPVTGLSLHPTGEYLLSAS 322 (506)
T ss_pred hhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccc--------ccCccccccccccceeeeeccCCcEEEEec
Confidence 456678999999999999999999999999999999997542 122344567999999999999999999999
Q ss_pred CCCcEEEEecCCcceeeeeecC--cccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC
Q 020798 93 DDKTIRLWDVPTATCLKTLIGH--TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
.|+.....|++++.++...... .-.+++.+|+|||..|.+|..||.+++||+.++.....|++|.++|..++|+.+|-
T Consensus 323 ~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY 402 (506)
T KOG0289|consen 323 NDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGY 402 (506)
T ss_pred CCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCce
Confidence 9999999999999876655432 23478999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC--CCcEEEEEeccCCceeEE
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS--TGKILKTYTGHTNSKYCI 248 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~~~~~ 248 (321)
+|+++..|+.|++||+|.-+..+.+.......+..+.|++.|.+|+.++.|=+|++++-. ....+..+..|.+...++
T Consensus 403 ~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v 482 (506)
T KOG0289|consen 403 WLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGV 482 (506)
T ss_pred EEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhccccccee
Confidence 999999999999999998887777766666678999999999999999877777777643 344566666665443333
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
.+....+++++++-|..++++.+
T Consensus 483 ---~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 483 ---RFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred ---eecccceEEeeccchhheEEeec
Confidence 33456889999999999888764
No 93
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.97 E-value=1.6e-29 Score=217.62 Aligned_cols=260 Identities=31% Similarity=0.582 Sum_probs=215.0
Q ss_pred cccccCCcce---eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEE
Q 020798 5 QSLESFRPYT---LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVF 81 (321)
Q Consensus 5 ~~~~~~~~~~---~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 81 (321)
+.|..++..+ +...+.||.+.|.+++|...+.+|++|+.|.++++||+.. ......+.+|...|.++..
T Consensus 228 ~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s--------g~C~~~l~gh~stv~~~~~ 299 (537)
T KOG0274|consen 228 STLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST--------GECTHSLQGHTSSVRCLTI 299 (537)
T ss_pred ceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC--------CcEEEEecCCCceEEEEEc
Confidence 4444444333 3344899999999999998889999999999999998653 3467788899999999887
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCee
Q 020798 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT 161 (321)
Q Consensus 82 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~ 161 (321)
.+ ..+++|+.|.+|++|++.++.++..+.+|.+.|.++..+ +..+++|+.|++|++||+.+++++..+.+|...|.
T Consensus 300 ~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~ 375 (537)
T KOG0274|consen 300 DP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVY 375 (537)
T ss_pred cC--ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEE
Confidence 54 467888999999999999999999999999999999998 78999999999999999999999999999999999
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCC-ceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 020798 162 AVDFNRDGTMIVTSSYDGLCRIWDASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 240 (321)
++.+.+. ..+++|+.|++|++||+++. +++..+. .+...+.. +...++.|++++.|+.|++||..+++.++.+.+
T Consensus 376 sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~-~h~~~v~~--l~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~ 451 (537)
T KOG0274|consen 376 SLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQ-GHTSLVSS--LLLRDNFLVSSSADGTIKLWDAEEGECLRTLEG 451 (537)
T ss_pred EEEecCc-ceEEeeeeccceEeecCCchhhhhhhhc-CCcccccc--cccccceeEeccccccEEEeecccCceeeeecc
Confidence 9988665 78999999999999999998 7776653 33333433 344678999999999999999999999999987
Q ss_pred -cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC
Q 020798 241 -HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 241 -~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
+...+..+. . ....+++++.||.+++||+++++.+..+-.
T Consensus 452 ~~~~~v~~l~---~--~~~~il~s~~~~~~~l~dl~~~~~~~~l~~ 492 (537)
T KOG0274|consen 452 RHVGGVSALA---L--GKEEILCSSDDGSVKLWDLRSGTLIRTLLS 492 (537)
T ss_pred CCcccEEEee---c--CcceEEEEecCCeeEEEecccCchhhhhhh
Confidence 444433322 1 146788899999999999999988776533
No 94
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.1e-29 Score=204.40 Aligned_cols=241 Identities=26% Similarity=0.483 Sum_probs=199.7
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCCCcE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTI 97 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i 97 (321)
+.--.+.|+++.|-.||++||.|...|.|++||... ...++.+.+|+.++..+.|+|.+ ..|++|++|+.+
T Consensus 64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~--------r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~ 135 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS--------RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVV 135 (487)
T ss_pred HHhhccceeEEEeecCCeEEEccCCcCcEEEecccc--------HHHHHHHhhccCceeEEEecccCCeEEEecCCCceE
Confidence 334567899999999999999999999999998532 23567889999999999999965 567788899999
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
++||+.+...+..+.+|+++|.|.+++|... .+++|+.||.|++||++.. ..+..+ .|..+|.++.+-|.|..++++
T Consensus 136 k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasA 214 (487)
T KOG0310|consen 136 KYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASA 214 (487)
T ss_pred EEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEc
Confidence 9999999987778899999999999999754 7899999999999999887 344444 689999999999999988887
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEec
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT 255 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
+. ..+++||+.+|.........|...|+++.+..++..|++++-|+.+++||+.+-+.+..+.-. +++.. +...+
T Consensus 215 gG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~-~pvLs---iavs~ 289 (487)
T KOG0310|consen 215 GG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYP-GPVLS---IAVSP 289 (487)
T ss_pred CC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecc-cceee---EEecC
Confidence 76 469999998665444444457888999999999999999999999999999888888887532 33322 33346
Q ss_pred CCeEEEEeCCCCeEEEEE
Q 020798 256 NGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 256 ~~~~l~~~~~dg~i~vwd 273 (321)
+++.++.|-+||.+.+=+
T Consensus 290 dd~t~viGmsnGlv~~rr 307 (487)
T KOG0310|consen 290 DDQTVVIGMSNGLVSIRR 307 (487)
T ss_pred CCceEEEecccceeeeeh
Confidence 888999999999887653
No 95
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=5.6e-29 Score=186.08 Aligned_cols=233 Identities=24% Similarity=0.482 Sum_probs=199.8
Q ss_pred ccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC
Q 020798 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 147 (321)
.+.+|+++++.+.|+.+|.+|++++.|....+|--.+++.+-++.+|.+.|+|++.+.+.+.+++|+.|.++++||+.+|
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG 84 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG 84 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence 36789999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCeeEEEEccCCCEEEEEe-----CCCeEEEEeCCC-------CceeeeeccCCCCCeEEEEEccCCCEE
Q 020798 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSS-----YDGLCRIWDAST-------GHCMKTLIDDENPPVSFVKFSPNGKFI 215 (321)
Q Consensus 148 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~dg~i~~~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~l 215 (321)
+++..++. ..+|..+.|+++|++++.+. ..+.|.++|++. .++...+... ...++.+.|.|-+++|
T Consensus 85 k~la~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~-~skit~a~Wg~l~~~i 162 (327)
T KOG0643|consen 85 KQLATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTP-DSKITSALWGPLGETI 162 (327)
T ss_pred cEEEEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCC-ccceeeeeecccCCEE
Confidence 99988874 67899999999999877664 456899999973 3334444333 3567889999999999
Q ss_pred EEEecCCeEEEEeCCCCc-EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEE
Q 020798 216 LVGTLDNTLRLWNYSTGK-ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294 (321)
Q Consensus 216 ~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 294 (321)
++|..||.|.+||+++++ .+.+...|... +.-....++..++++++.|.+-++||+.+.++++++.. ..||++.+
T Consensus 163 i~Ghe~G~is~~da~~g~~~v~s~~~h~~~---Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t-e~PvN~aa 238 (327)
T KOG0643|consen 163 IAGHEDGSISIYDARTGKELVDSDEEHSSK---INDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT-ERPVNTAA 238 (327)
T ss_pred EEecCCCcEEEEEcccCceeeechhhhccc---cccccccCCcceEEecccCccceeeeccceeeEEEeee-ccccccee
Confidence 999999999999999985 45555556553 33344457899999999999999999999999988875 56999999
Q ss_pred ecCCCceEEEEe
Q 020798 295 SHPTENIIASGA 306 (321)
Q Consensus 295 ~~p~~~~l~s~~ 306 (321)
++|..+.++.|+
T Consensus 239 isP~~d~VilgG 250 (327)
T KOG0643|consen 239 ISPLLDHVILGG 250 (327)
T ss_pred cccccceEEecC
Confidence 999999888876
No 96
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1.5e-30 Score=199.92 Aligned_cols=244 Identities=26% Similarity=0.471 Sum_probs=204.1
Q ss_pred cccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeee--------eecCcccEEEEEECCCCCEEEEeeCCCcEEEE
Q 020798 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKT--------LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIW 142 (321)
Q Consensus 71 ~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~w 142 (321)
+.+..+.|..|+|||++|++|+.||-|.+||.-+++..+. +.-+..+|.|+.|+.|...+++|+.||.|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 3455678899999999999999999999999988865432 33467889999999999999999999999999
Q ss_pred ecCCCEEEEEEe-CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC
Q 020798 143 DVKTGKCLKVLP-AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 143 d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d 221 (321)
.+++|.++..+. .|...|+++.|+.|+..+++++.|.++++.-+.+|++++.+. .+...++.+.|.++|..+++++.|
T Consensus 291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfr-GHsSyvn~a~ft~dG~~iisaSsD 369 (508)
T KOG0275|consen 291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFR-GHSSYVNEATFTDDGHHIISASSD 369 (508)
T ss_pred EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhc-CccccccceEEcCCCCeEEEecCC
Confidence 999999998886 899999999999999999999999999999999999888764 556778999999999999999999
Q ss_pred CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC---CCCCeEEEEecCC
Q 020798 222 NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG---HTDPVISVASHPT 298 (321)
Q Consensus 222 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~p~ 298 (321)
|++++|+.++.+.+.++..........+....+.+...++.+....+|++.+++ ++.+..+.. ..+.-.+.+.+|.
T Consensus 370 gtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpk 448 (508)
T KOG0275|consen 370 GTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPK 448 (508)
T ss_pred ccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCC
Confidence 999999999999888886544333333344456677888999999999999986 555555532 3355677788999
Q ss_pred CceEEEEeecCCccEEEccc
Q 020798 299 ENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 299 ~~~l~s~~~d~~~~i~iw~~ 318 (321)
|.++-+.++ |+.++.+..
T Consensus 449 GewiYcigE--D~vlYCF~~ 466 (508)
T KOG0275|consen 449 GEWIYCIGE--DGVLYCFSV 466 (508)
T ss_pred CcEEEEEcc--CcEEEEEEe
Confidence 999998874 577777654
No 97
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=4.7e-29 Score=189.50 Aligned_cols=240 Identities=22% Similarity=0.345 Sum_probs=182.3
Q ss_pred ccccEEEEEECC-CCCEEEEEeCCCcEEEEecCCc-ce-eeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE
Q 020798 72 HEQGVSDLVFSS-DSRFLVSASDDKTIRLWDVPTA-TC-LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK 148 (321)
Q Consensus 72 h~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~-~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 148 (321)
.++.|.+|+||| ...++++++.|++||+|++... .. -+....|.+++.+++|+.+|..+++|+.|+.+++||+.+++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ 105 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC
Confidence 357899999999 4556669999999999999763 32 24556789999999999999999999999999999999995
Q ss_pred EEEEEeCCCCCeeEEEEccCCC--EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEE
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGT--MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRL 226 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i 226 (321)
...+..|..+|..+.|-+... .|++|+.|.++++||.+....+.++.... .+. +.+--..+++++..++.|.+
T Consensus 106 -~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe--RvY--a~Dv~~pm~vVata~r~i~v 180 (347)
T KOG0647|consen 106 -VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE--RVY--AADVLYPMAVVATAERHIAV 180 (347)
T ss_pred -eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc--eee--ehhccCceeEEEecCCcEEE
Confidence 556778999999999987665 89999999999999999887776653322 222 33334557888999999999
Q ss_pred EeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc--eEEEEecCCC---------CCeEEEEe
Q 020798 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR--KVVQKLEGHT---------DPVISVAS 295 (321)
Q Consensus 227 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~h~---------~~v~~~~~ 295 (321)
|+++++......... ...+.+.+.....+.+..|.|+-+|.+.+..+..+ +.-..++.|. .+|++++|
T Consensus 181 ynL~n~~te~k~~~S-pLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~F 259 (347)
T KOG0647|consen 181 YNLENPPTEFKRIES-PLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAF 259 (347)
T ss_pred EEcCCCcchhhhhcC-cccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEe
Confidence 999776433221111 11222222333345666688999999999998775 3333445554 26889999
Q ss_pred cCCCceEEEEeecCCccEEEcccc
Q 020798 296 HPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 296 ~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+|....|+|+| +||++.+||.+
T Consensus 260 hP~hgtlvTaG--sDGtf~FWDkd 281 (347)
T KOG0647|consen 260 HPVHGTLVTAG--SDGTFSFWDKD 281 (347)
T ss_pred ecccceEEEec--CCceEEEecch
Confidence 99999999998 56999999975
No 98
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.97 E-value=1.5e-29 Score=204.48 Aligned_cols=282 Identities=19% Similarity=0.378 Sum_probs=224.1
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccc--ccccccEEEEEECCCCCEEEEEeCCCcEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKF--TGHEQGVSDLVFSSDSRFLVSASDDKTIR 98 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~--~~h~~~i~~~~~~~~~~~l~~~~~d~~i~ 98 (321)
.|.+-|-++++|...+.+.||+ .|.|++||+..... ..|+..+ ..-...|+++...|||+.|++|+.-.++.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~-----k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastls 490 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGN-----KSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLS 490 (705)
T ss_pred ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCC-----CCccccccccCcccceeeeEecCCCceEEeccccceee
Confidence 5777888899999999999987 68899999976421 1222222 23457899999999999999999999999
Q ss_pred EEecCCccee--eeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe
Q 020798 99 LWDVPTATCL--KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS 176 (321)
Q Consensus 99 iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 176 (321)
|||+...+.. ..+.........++.+||.+..++|..||.|.|||+.+...+..+++|.+.+.++.++++|..|-+|+
T Consensus 491 iWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGG 570 (705)
T KOG0639|consen 491 IWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGG 570 (705)
T ss_pred eeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCC
Confidence 9999766432 22333334567889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC
Q 020798 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 177 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
-|+++|.||++.++.+... .....|.++..+|++.++++|-.++.+.|......+ ...+..|.. |+...-+..-
T Consensus 571 lDntvRcWDlregrqlqqh--dF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-kyqlhlheS---cVLSlKFa~c 644 (705)
T KOG0639|consen 571 LDNTVRCWDLREGRQLQQH--DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-KYQLHLHES---CVLSLKFAYC 644 (705)
T ss_pred Cccceeehhhhhhhhhhhh--hhhhhheecccCCCccceeeecccCcEEEEecCCcc-ceeeccccc---EEEEEEeccc
Confidence 9999999999988655443 334568889999999999999999999998865443 222333332 3333334456
Q ss_pred CeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 257 GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
|+++++.+.|..+..|...-+..+...+. .++|+++.++-|.++++|||-| ....+|.
T Consensus 645 GkwfvStGkDnlLnawrtPyGasiFqskE-~SsVlsCDIS~ddkyIVTGSGd--kkATVYe 702 (705)
T KOG0639|consen 645 GKWFVSTGKDNLLNAWRTPYGASIFQSKE-SSSVLSCDISFDDKYIVTGSGD--KKATVYE 702 (705)
T ss_pred CceeeecCchhhhhhccCccccceeeccc-cCcceeeeeccCceEEEecCCC--cceEEEE
Confidence 99999999999999999988887776654 6789999999999999999955 4444443
No 99
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=1.8e-28 Score=187.56 Aligned_cols=292 Identities=26% Similarity=0.447 Sum_probs=215.8
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
|..+..+|.- .. -.|+.|++-|.+||+|..||.+.|||+.+. .+-+.+.+|..+|.+++||++|+.|+++
T Consensus 14 PEel~~tld~-~~-a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~--------~iar~lsaH~~pi~sl~WS~dgr~Llts 83 (405)
T KOG1273|consen 14 PEELTHTLDN-PL-AECCQFSRWGDYLAVGCANGRVVIYDFDTF--------RIARMLSAHVRPITSLCWSRDGRKLLTS 83 (405)
T ss_pred hHhhceeccC-Cc-cceEEeccCcceeeeeccCCcEEEEEcccc--------chhhhhhccccceeEEEecCCCCEeeee
Confidence 3444555532 22 778999999999999999999999998653 2456788999999999999999999999
Q ss_pred eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEeCCC-----CCeeEEEE
Q 020798 92 SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLPAHS-----DPVTAVDF 165 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-----~~v~~~~~ 165 (321)
+.|..|.+||+..+.+++.+. ..++|+.+.|+|.. +.++++-.+..-.+.++..+. ...++... .......|
T Consensus 84 S~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~-h~~Lp~d~d~dln~sas~~~f 161 (405)
T KOG1273|consen 84 SRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK-HSVLPKDDDGDLNSSASHGVF 161 (405)
T ss_pred cCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCc-eeeccCCCccccccccccccc
Confidence 999999999999999887765 57789999999964 344444344444555555432 11222111 11223358
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC-------cEE--E
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG-------KIL--K 236 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~-------~~~--~ 236 (321)
.+.|+++++|...|.+.++|..+.+++..+.......|..+.++..|+.|+.-+.|..|+.|+++.- ++. +
T Consensus 162 dr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~ 241 (405)
T KOG1273|consen 162 DRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEH 241 (405)
T ss_pred cCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhH
Confidence 8999999999999999999999988877665444456888999999999999999999999997631 111 1
Q ss_pred EEeccCCceeEEEeEEEecCCeEEEEeCC-CCeEEEEEcccceEEEEecCCC-CCeEEEEecCCCceEEEEeecCCccEE
Q 020798 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSE-DSCVYLWELQSRKVVQKLEGHT-DPVISVASHPTENIIASGALDNDRTVK 314 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~~~d~~~~i~ 314 (321)
.++.-.+...--.++|+ .+|.++++|+. ...++||+-..|.+++.+.|.. ....++.|+|....+++-. .|.|+
T Consensus 242 K~qDvVNk~~Wk~ccfs-~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si~---sg~v~ 317 (405)
T KOG1273|consen 242 KLQDVVNKLQWKKCCFS-GDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASIA---SGVVY 317 (405)
T ss_pred HHHHHHhhhhhhheeec-CCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeecc---CCceE
Confidence 11110011000122343 58999888764 3469999999999999999877 6789999999999988863 47899
Q ss_pred Ecccc
Q 020798 315 IWTQE 319 (321)
Q Consensus 315 iw~~~ 319 (321)
||...
T Consensus 318 iw~~~ 322 (405)
T KOG1273|consen 318 IWAVV 322 (405)
T ss_pred EEEee
Confidence 99874
No 100
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.97 E-value=1.1e-28 Score=197.10 Aligned_cols=254 Identities=23% Similarity=0.363 Sum_probs=201.5
Q ss_pred cCCcccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCC--CCCcccccccccccEEEEEECCCCC-EEEEEeCCC
Q 020798 20 NGHLRAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDST--PPSPLQKFTGHEQGVSDLVFSSDSR-FLVSASDDK 95 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~--~~~~~~~~~~h~~~i~~~~~~~~~~-~l~~~~~d~ 95 (321)
.-|.+.|..+++.|+. .++|+.+..+.+.|||..+....... ...|...+.+|++.-+.++|++... .|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 3599999999999976 47788899999999998875543322 3456678899999778899998643 788999999
Q ss_pred cEEEEecCCcc-------eeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecC--CCEEEEEEeCCCCCeeEEEE
Q 020798 96 TIRLWDVPTAT-------CLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVK--TGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 96 ~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~--~~~~~~~~~~~~~~v~~~~~ 165 (321)
.|.+||+.... ....+.+|...|..++|++-. ..|++++.|+.+.+||++ +.++....+.|..++.+++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 99999986432 234567999999999999854 568899999999999999 55666677899999999999
Q ss_pred ccCC-CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC-CEEEEEecCCeEEEEeCCCC-----------
Q 020798 166 NRDG-TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG-KFILVGTLDNTLRLWNYSTG----------- 232 (321)
Q Consensus 166 ~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~~----------- 232 (321)
+|-+ ..|++|+.|++|.+||+|+-......+..+...|..+.|+|.. ..|++++.|+.+.+||+..-
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d 360 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED 360 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence 9965 4678899999999999997654444456677889999999964 56778889999999998642
Q ss_pred ---cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 233 ---KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
+++....+|...+ ..+.+.+.....+++.+.|+.+.||++.
T Consensus 361 gppEllF~HgGH~~kV--~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 361 GPPELLFIHGGHTAKV--SDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCcceeEEecCccccc--ccccCCCCCCeEEEEecCCceEEEeecc
Confidence 2344455665543 3345555667789999999999999986
No 101
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.6e-28 Score=215.10 Aligned_cols=261 Identities=25% Similarity=0.392 Sum_probs=203.9
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccC----------CCCCCCCCcccccccccccEEEEEECCC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSIS----------NSDSTPPSPLQKFTGHEQGVSDLVFSSD 84 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~----------~~~~~~~~~~~~~~~h~~~i~~~~~~~~ 84 (321)
....+..|.+.|+|++|+|||++||+||.|+.+.+|...... ............+.+|+..|.++.|+|+
T Consensus 61 ~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~ 140 (942)
T KOG0973|consen 61 HLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD 140 (942)
T ss_pred hheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC
Confidence 345567899999999999999999999999999999887410 0011122345677899999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCC------C
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS------D 158 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~------~ 158 (321)
+.+|++++.|++|.|||..+.+.++.+.+|...|..+.|.|-|++|++-+.|++|++|++.+-...+.+..+. .
T Consensus 141 ~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T 220 (942)
T KOG0973|consen 141 DSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTT 220 (942)
T ss_pred ccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999977655555554432 3
Q ss_pred CeeEEEEccCCCEEEEEe----CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC-----CC------------EEEE
Q 020798 159 PVTAVDFNRDGTMIVTSS----YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN-----GK------------FILV 217 (321)
Q Consensus 159 ~v~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~------------~l~~ 217 (321)
.+..+.|+|||.+|++.. .-.++.+.+-.+-+.-..+. .|..++.+++|+|. .+ .+++
T Consensus 221 ~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~Lv-GH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Av 299 (942)
T KOG0973|consen 221 FFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLV-GHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAV 299 (942)
T ss_pred eeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeee-cCCCceEEEEeChHHhccccccCCccCCCcceEEEEE
Confidence 467899999999998764 23357777655544444444 45668999999972 11 5678
Q ss_pred EecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce
Q 020798 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
|+.|++|.||.....+++.....-.. ...+...| .+||..|++++.||+|.++.++..+
T Consensus 300 gSqDrSlSVW~T~~~RPl~vi~~lf~-~SI~DmsW-spdG~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 300 GSQDRSLSVWNTALPRPLFVIHNLFN-KSIVDMSW-SPDGFSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred ecCCccEEEEecCCCCchhhhhhhhc-CceeeeeE-cCCCCeEEEEecCCeEEEEEcchHH
Confidence 99999999999877776655432211 11233344 4789999999999999999987543
No 102
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.97 E-value=4.7e-29 Score=196.85 Aligned_cols=247 Identities=29% Similarity=0.478 Sum_probs=205.9
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
+.+..+|.|-.++|+++.|.++++.+++.+.|+.+++|++.. .....++.+|++.|+++.|......+++|+
T Consensus 209 ~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~--------~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs 280 (459)
T KOG0288|consen 209 SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDS--------LRLRHTLSGHTDKVTAAKFKLSHSRVVSGS 280 (459)
T ss_pred hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccc--------hhhhhhhcccccceeeehhhccccceeecc
Confidence 446677888899999999999999999999999999998754 345678899999999999998777799999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
.|.+|++||+.+..|.+++.. .+.+..+..+ ...++++-.|++|++||+++..+...++.+. .|+++..++++..+
T Consensus 281 ~DRtiK~WDl~k~~C~kt~l~-~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~l 356 (459)
T KOG0288|consen 281 ADRTIKLWDLQKAYCSKTVLP-GSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLEL 356 (459)
T ss_pred ccchhhhhhhhhhheeccccc-cccccceEec--ceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEE
Confidence 999999999999888776542 3345555555 4568899999999999999999999888766 89999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccC---CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDD---ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
++++.|.++.+.|+++......+... .....+.+.|+|++.|+++|+.||.|+||++.++++...+....... .+.
T Consensus 357 LsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~-aI~ 435 (459)
T KOG0288|consen 357 LSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNA-AIT 435 (459)
T ss_pred eeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCc-ceE
Confidence 99999999999999987655544221 12346788999999999999999999999999999988887655442 344
Q ss_pred eEEEecCCeEEEEeCCCCeEEEE
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLW 272 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vw 272 (321)
++.+.+.|..|++++.++.+.+|
T Consensus 436 s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 436 SLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EEEEcCCCchhhcccCCcceEec
Confidence 44445789999999999999998
No 103
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=5.8e-27 Score=171.63 Aligned_cols=256 Identities=25% Similarity=0.445 Sum_probs=198.3
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC----CCE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD----SRF 87 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~----~~~ 87 (321)
|.-+-+.-+.|.+.|+|.+|||+|++||+|++|..|++.-..... .....+..++.-|.+.|++++|..+ +..
T Consensus 78 p~v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt---~~~~g~dle~nmhdgtirdl~fld~~~s~~~i 154 (350)
T KOG0641|consen 78 PSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADT---CNATGHDLEFNMHDGTIRDLAFLDDPESGGAI 154 (350)
T ss_pred CeEEeeeccccCccEEEEEecCccCeEEecCCCceEEEEeccccc---ccccCcceeeeecCCceeeeEEecCCCcCceE
Confidence 344445557789999999999999999999999999987543221 1222344567789999999999643 346
Q ss_pred EEEEe-CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC--C-----CCC
Q 020798 88 LVSAS-DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA--H-----SDP 159 (321)
Q Consensus 88 l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--~-----~~~ 159 (321)
|++++ .|..|++=|...++....+.+|.+.|..+ ++-++-.+++|+.|.+|++||++-..++.++.. | ...
T Consensus 155 l~s~gagdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessa 233 (350)
T KOG0641|consen 155 LASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSA 233 (350)
T ss_pred EEecCCCcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccce
Confidence 66554 45567777888889899999999998876 566788999999999999999998887776532 2 357
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC----cEE
Q 020798 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG----KIL 235 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~----~~~ 235 (321)
|.+++..|.|++|++|-.|..+.+||++.++.++.+. .+...|.++.|+|...++++++.|..|++=|++.. -++
T Consensus 234 vaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~-phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~ 312 (350)
T KOG0641|consen 234 VAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH-PHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPI 312 (350)
T ss_pred eEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC-CCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCce
Confidence 8999999999999999999999999999998887764 56678999999999999999999999999998642 122
Q ss_pred EEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 236 KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
-....|... .+.+.|.+. .-.+++.+.|.++.+|-+.
T Consensus 313 ~vv~ehkdk--~i~~rwh~~-d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 313 MVVAEHKDK--AIQCRWHPQ-DFSFISSSADKTATLWALN 349 (350)
T ss_pred EEEEeccCc--eEEEEecCc-cceeeeccCcceEEEeccC
Confidence 223334332 344455544 4456778899999999763
No 104
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.97 E-value=8.4e-28 Score=182.35 Aligned_cols=292 Identities=22% Similarity=0.422 Sum_probs=219.5
Q ss_pred cCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCC-------cccccccccccEEEEEECC-CCCEEEE
Q 020798 20 NGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPS-------PLQKFTGHEQGVSDLVFSS-DSRFLVS 90 (321)
Q Consensus 20 ~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~i~~~~~~~-~~~~l~~ 90 (321)
.-|.+.|.++...| .|+|+++|+.||.+.+||++.....+..... ..+...+|+-+|.++.|-| |.-.+.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 35889999999987 6899999999999999999875532221111 1223457888999999988 5557888
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCC---CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ---SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~ 167 (321)
++-|.++++||..+.+....+. ..+.|.+-+++|- ...+++|..+-.|++.|+++|.....+.+|.+.|.++.|+|
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp 198 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSP 198 (397)
T ss_pred ccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEecc
Confidence 9999999999998877655443 4556777777774 34678888899999999999999999999999999999999
Q ss_pred CCCE-EEEEeCCCeEEEEeCCCC-ceeeee-------------ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC
Q 020798 168 DGTM-IVTSSYDGLCRIWDASTG-HCMKTL-------------IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 168 ~~~~-l~~~~~dg~i~~~d~~~~-~~~~~~-------------~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~ 232 (321)
..++ |++|+.||.|++||++.. .+...+ ...+...+..++|..+|.++++.+.|..+++|+..+|
T Consensus 199 ~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G 278 (397)
T KOG4283|consen 199 SSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESG 278 (397)
T ss_pred CceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccC
Confidence 8875 678999999999999754 232221 1123445788999999999999999999999999877
Q ss_pred cEE-EEEe--cc---CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 233 KIL-KTYT--GH---TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 233 ~~~-~~~~--~~---~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
+.. +.+- .+ ......+. ....+.++.. -.++.+.++++-++..+..+..|...|.+.++.|+=..+-+|.
T Consensus 279 ~ntl~~~g~~~~n~~~~~~~~~~---~~~s~vfv~~-p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~ 354 (397)
T KOG4283|consen 279 RNTLREFGPIIHNQTTSFAVHIQ---SMDSDVFVLF-PNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGD 354 (397)
T ss_pred cccccccccccccccccceEEEe---ecccceEEEE-ecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccc
Confidence 532 1111 11 11111111 1122333333 3348899999999999999999999999999999988888887
Q ss_pred ecCCccEEEccc
Q 020798 307 LDNDRTVKIWTQ 318 (321)
Q Consensus 307 ~d~~~~i~iw~~ 318 (321)
.| +.|..|..
T Consensus 355 ~d--~ni~~w~p 364 (397)
T KOG4283|consen 355 MN--GNIYMWSP 364 (397)
T ss_pred cC--Cccccccc
Confidence 54 77888864
No 105
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=6.9e-28 Score=192.82 Aligned_cols=285 Identities=18% Similarity=0.277 Sum_probs=228.8
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC-EEEEEeCCCcEEEEe
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR-FLVSASDDKTIRLWD 101 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd 101 (321)
.++|+++.|+|....|++++.|+.+++|.+.+..+ ..++.+.--.-+|.+..|.|+|. .+++++....++.||
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N------~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyD 286 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVN------PKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYD 286 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccC------hhheeeeeccCccceeeecCCCceEEEecccceEEEEee
Confidence 46899999999999999999999999999876432 23444444467899999999998 888999999999999
Q ss_pred cCCcceee--eeecCc-ccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCC
Q 020798 102 VPTATCLK--TLIGHT-NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 102 ~~~~~~~~--~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
+.+.+..+ ...++. ..+....++|++++|+..+..|.|.+....+++.+..++. .+.|..+.|+.+++.|++++.+
T Consensus 287 le~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~ 365 (514)
T KOG2055|consen 287 LETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGT 365 (514)
T ss_pred ccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCC
Confidence 98876432 333443 3466778899999999999999999999999888877764 5789999999999999999999
Q ss_pred CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC------CcEEEEEeccCCceeEEEeEE
Q 020798 179 GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST------GKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~~~~~~ 252 (321)
|.|.+||++...+..++.....-.-+.++.+++|.+|++|+..|.|.|||..+ .+++..+.. ....++...
T Consensus 366 GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dN---Ltt~Itsl~ 442 (514)
T KOG2055|consen 366 GEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDN---LTTAITSLQ 442 (514)
T ss_pred ceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhh---hheeeeeee
Confidence 99999999999888888765555557788899999999999999999999653 345554432 334466666
Q ss_pred EecCCeEEEEeC--CCCeEEEEEcccceEEEEecC---CCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 253 SVTNGKYIVSGS--EDSCVYLWELQSRKVVQKLEG---HTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 253 ~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+.++.+.||.++ .+..+|+-.+.+......+.. .-+.|+|++|+|.+-+||.|- ++|.|.+|.+.
T Consensus 443 Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGN--e~grv~l~kL~ 512 (514)
T KOG2055|consen 443 FNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGN--EAGRVHLFKLH 512 (514)
T ss_pred eCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeec--CCCceeeEeec
Confidence 678899988876 456899988877666554443 235689999999999999997 45899999875
No 106
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.97 E-value=1.5e-28 Score=187.69 Aligned_cols=249 Identities=23% Similarity=0.478 Sum_probs=194.2
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC------------c------ceeeeeecCcccEEEEEECCCCC
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT------------A------TCLKTLIGHTNYVFCVNFNPQSN 128 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~------------~------~~~~~~~~~~~~v~~~~~~~~~~ 128 (321)
..++.|+..+++.+|++||.++++|+.|.+|+|.|++. + ..++++..|.+.|.++.|+|...
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 44678999999999999999999999999999999851 1 23567788999999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCEEEEEE--eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec--cCCCCCeE
Q 020798 129 MIVSGAFDETVRIWDVKTGKCLKVL--PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI--DDENPPVS 204 (321)
Q Consensus 129 ~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~ 204 (321)
.|++++.|++|++||+......+.+ .....+|.++.|+|.|.+++.|..-.++++||+.+.++..... ..+...|+
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~ 265 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAIT 265 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccccccee
Confidence 9999999999999998754322211 1234689999999999999999999999999999988765432 23456799
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec-cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 205 FVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG-HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 205 ~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
++.+++.|++.++++.||.|++||--+++.+.++.. |.+.. +....+..+++++++.+.|..+++|++.+++.+..+
T Consensus 266 ~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gse--vcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~Y 343 (430)
T KOG0640|consen 266 QVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSE--VCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEY 343 (430)
T ss_pred EEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCce--eeeEEEccCCeEEeecCCcceeeeeeecCCceEEEE
Confidence 999999999999999999999999888888887754 43332 334444578999999999999999999999999887
Q ss_pred cCCC--C---CeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 284 EGHT--D---PVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 284 ~~h~--~---~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
.|.. + --+...|+..+.++..--+ ..+.+.-||.
T Consensus 344 tGAg~tgrq~~rtqAvFNhtEdyVl~pDE-as~slcsWda 382 (430)
T KOG0640|consen 344 TGAGTTGRQKHRTQAVFNHTEDYVLFPDE-ASNSLCSWDA 382 (430)
T ss_pred ecCCcccchhhhhhhhhcCccceEEcccc-ccCceeeccc
Confidence 6631 1 1234455555555554321 1234555554
No 107
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.97 E-value=2.5e-28 Score=194.95 Aligned_cols=246 Identities=21% Similarity=0.393 Sum_probs=196.3
Q ss_pred cccccEEEEEECCCCC-EEEEEeCCCcEEEEecCCcc----------eeeeeecCcccEEEEEECCCC-CEEEEeeCCCc
Q 020798 71 GHEQGVSDLVFSSDSR-FLVSASDDKTIRLWDVPTAT----------CLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDET 138 (321)
Q Consensus 71 ~h~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~----------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~ 138 (321)
.|.+.|+.+.+.|... .+++.+..+.+.|||..+.. +-..+.+|...-+.++|++.. ..+++++.|+.
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 4889999999999765 56677888999999975432 123678898888889999864 46899999999
Q ss_pred EEEEecCCCE-------EEEEEeCCCCCeeEEEEccCC-CEEEEEeCCCeEEEEeCCCC-ceeeeeccCCCCCeEEEEEc
Q 020798 139 VRIWDVKTGK-------CLKVLPAHSDPVTAVDFNRDG-TMIVTSSYDGLCRIWDASTG-HCMKTLIDDENPPVSFVKFS 209 (321)
Q Consensus 139 i~~wd~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~ 209 (321)
|.+||+.... ....+..|...|..++|++.. ..|++++.|+.+.+||+|++ .........+...+.+++|+
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn 281 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN 281 (422)
T ss_pred EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC
Confidence 9999986432 345678899999999999954 57889999999999999962 22333445677889999999
Q ss_pred cC-CCEEEEEecCCeEEEEeCCCCc-EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc----------
Q 020798 210 PN-GKFILVGTLDNTLRLWNYSTGK-ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR---------- 277 (321)
Q Consensus 210 ~~-g~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---------- 277 (321)
|- +..||+|+.|++|.+||+++.+ .+..+.+|...+.++ .|++.....||+.+.|+.+.|||+..-
T Consensus 282 p~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V--~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~ 359 (422)
T KOG0264|consen 282 PFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQV--EWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAE 359 (422)
T ss_pred CCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEE--EeCCCCCceeEecccCCcEEEEeccccccccChhhhc
Confidence 94 5667788899999999999754 677888888877655 466677889999999999999998531
Q ss_pred ----eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 278 ----KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 278 ----~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+++....||...|..+.|+|...++++.. .+|+.+.||.+.
T Consensus 360 dgppEllF~HgGH~~kV~DfsWnp~ePW~I~Sv-aeDN~LqIW~~s 404 (422)
T KOG0264|consen 360 DGPPELLFIHGGHTAKVSDFSWNPNEPWTIASV-AEDNILQIWQMA 404 (422)
T ss_pred cCCcceeEEecCcccccccccCCCCCCeEEEEe-cCCceEEEeecc
Confidence 34566788999999999999998866543 357899999874
No 108
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=4.8e-28 Score=193.60 Aligned_cols=247 Identities=26% Similarity=0.435 Sum_probs=202.6
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCccee----e-------------ee-ecCcccEEEEEECCCC
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL----K-------------TL-IGHTNYVFCVNFNPQS 127 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~----~-------------~~-~~~~~~v~~~~~~~~~ 127 (321)
...+..|..++.+++++|+.++.++++.+++|.-|++.+++.. . .- .+|...+.++++++|+
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 3456779999999999999999999999999999998766522 1 11 2788889999999999
Q ss_pred CEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEE
Q 020798 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207 (321)
Q Consensus 128 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 207 (321)
++|++|+.|..|.+|+.++.+.++.++.|.+.|.+++|-.....+++++.|..+++|++.....+.+++ .|+..|..+.
T Consensus 215 kylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetly-GHqd~v~~Id 293 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLY-GHQDGVLGID 293 (479)
T ss_pred cEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHh-CCccceeeec
Confidence 999999999999999999999999999999999999999888889999999999999998765555554 4556677777
Q ss_pred EccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec-CC
Q 020798 208 FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE-GH 286 (321)
Q Consensus 208 ~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~h 286 (321)
...-++.+.+|+.|+++++|++... ..-.+.++.+...|+.+ -+...+++|+.+|.|.+|++.+.+++.... .|
T Consensus 294 aL~reR~vtVGgrDrT~rlwKi~ee-sqlifrg~~~sidcv~~----In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AH 368 (479)
T KOG0299|consen 294 ALSRERCVTVGGRDRTVRLWKIPEE-SQLIFRGGEGSIDCVAF----INDEHFVSGSDNGSIALWSLLKKKPLFTSRLAH 368 (479)
T ss_pred hhcccceEEeccccceeEEEecccc-ceeeeeCCCCCeeeEEE----ecccceeeccCCceEEEeeecccCceeEeeccc
Confidence 7777888888889999999999543 33345566655555443 256789999999999999998877765432 12
Q ss_pred -----------CCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 287 -----------TDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 287 -----------~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
...|++|+..|..+++|+|| .+|.|++|..+.
T Consensus 369 gv~~~~~~~~~~~Witsla~i~~sdL~asGS--~~G~vrLW~i~~ 411 (479)
T KOG0299|consen 369 GVIPELDPVNGNFWITSLAVIPGSDLLASGS--WSGCVRLWKIED 411 (479)
T ss_pred cccCCccccccccceeeeEecccCceEEecC--CCCceEEEEecC
Confidence 12789999999999999999 458999998763
No 109
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=4.9e-27 Score=202.31 Aligned_cols=270 Identities=21% Similarity=0.339 Sum_probs=216.6
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRL 99 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~i 99 (321)
-+|..+-+.++|.|+|+.|.+|+.||.|++|+...-. ..+..+ ..+...|.+++. ++.+|++|+.++.|.+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~----e~P~ti---~~~g~~v~~ia~--~s~~f~~~s~~~tv~~ 80 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDE----EEPETI---DISGELVSSIAC--YSNHFLTGSEQNTVLR 80 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcc----cCCchh---hccCceeEEEee--cccceEEeeccceEEE
Confidence 4799999999999999999999999999999764321 111111 225566666665 4558999999999999
Q ss_pred EecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC
Q 020798 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179 (321)
Q Consensus 100 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 179 (321)
|.+..++.-..+....-++.+++++.+|++++.|+.|-.|++.++.+......+.+|..+|.++.|+|++++|++.+-||
T Consensus 81 y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG 160 (933)
T KOG1274|consen 81 YKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDG 160 (933)
T ss_pred eeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCc
Confidence 99998876555556677899999999999999999999999999998888889999999999999999999999999999
Q ss_pred eEEEEeCCCCceeeeecc-------CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 180 LCRIWDASTGHCMKTLID-------DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 180 ~i~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
.+++||+.++.+...+.. .....+..++|+|+|..+++...|+.|++|+.........+........ ++.+.
T Consensus 161 ~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~-~~~~~ 239 (933)
T KOG1274|consen 161 KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSK-FSDLQ 239 (933)
T ss_pred eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccc-eEEEE
Confidence 999999998765444321 1123467789999988888889999999999999988877765433322 44455
Q ss_pred EecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEE
Q 020798 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 303 (321)
+.|+|.|||+++.||.|.|||.++-.. +.....|.+++|.|+++-+-
T Consensus 240 wsPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it 286 (933)
T KOG1274|consen 240 WSPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAIT 286 (933)
T ss_pred EcCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCCCCCeeE
Confidence 568899999999999999999987221 23356899999999986543
No 110
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.1e-30 Score=215.27 Aligned_cols=237 Identities=27% Similarity=0.537 Sum_probs=211.5
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT 146 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 146 (321)
+.+..|...+.++..-..++.+++|+.|..+.+|.+.....+..+.+|...|.++.|+++...|++|+.+|+|++||+..
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDlee 101 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEE 101 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhh
Confidence 34557888888888877889999999999999999988877788999999999999999999999999999999999999
Q ss_pred CEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEE
Q 020798 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRL 226 (321)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i 226 (321)
.+.+.++.+|...+.++.|+|-+.+++.++.|+.+++||++...|...+.. +...+..+.|+|+|++++.++.|..++|
T Consensus 102 Ak~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s-~~~vv~~l~lsP~Gr~v~~g~ed~tvki 180 (825)
T KOG0267|consen 102 AKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKS-HTRVVDVLRLSPDGRWVASGGEDNTVKI 180 (825)
T ss_pred hhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecC-CcceeEEEeecCCCceeeccCCcceeee
Confidence 999999999999999999999999999999999999999997667666544 6667889999999999999999999999
Q ss_pred EeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 227 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
||+..|+....|..|......+. ..+..-+++.|+.|++|++||+++.+++...+.....|.+++|+|++..+.+|-
T Consensus 181 ~d~~agk~~~ef~~~e~~v~sle---~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~ 257 (825)
T KOG0267|consen 181 WDLTAGKLSKEFKSHEGKVQSLE---FHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGE 257 (825)
T ss_pred ecccccccccccccccccccccc---cCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCc
Confidence 99999999999998887665444 234566789999999999999999999988888888999999999999999885
Q ss_pred e
Q 020798 307 L 307 (321)
Q Consensus 307 ~ 307 (321)
.
T Consensus 258 q 258 (825)
T KOG0267|consen 258 Q 258 (825)
T ss_pred h
Confidence 3
No 111
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.1e-28 Score=205.11 Aligned_cols=236 Identities=22% Similarity=0.463 Sum_probs=199.3
Q ss_pred EEEEC-CCCCEEEEEeCCCcEEEEecCCcc------eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC--E
Q 020798 78 DLVFS-SDSRFLVSASDDKTIRLWDVPTAT------CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG--K 148 (321)
Q Consensus 78 ~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~--~ 148 (321)
.+..+ |.+++|++|+.||.|++|++.... ++.++..|...|..+....+++.|++++.|-+|++|+...+ -
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~ 108 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTF 108 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcch
Confidence 34444 467789999999999999975422 35677889999999999999999999999999999998876 4
Q ss_pred EEEEEeCCCCCeeEEEE-ccCCCEEEEEeCCCeEEEEeCCCCce--e--------eeeccCCCCCeEEEEEccCCCEEEE
Q 020798 149 CLKVLPAHSDPVTAVDF-NRDGTMIVTSSYDGLCRIWDASTGHC--M--------KTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~--~--------~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
++..+..|.+.|.++++ -++...+++|+-|+.|.+||+.++.. + .....+...++.+++.++.|..++.
T Consensus 109 c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivs 188 (735)
T KOG0308|consen 109 CMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVS 188 (735)
T ss_pred hHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEe
Confidence 67788899999999999 77888999999999999999987622 1 1122234456889999999999999
Q ss_pred EecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecC
Q 020798 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p 297 (321)
|+..+.|++||.++.+.+-.+.+|+..+.++ ...+||..++++++||+|++||+..++++..+..|...|+++..+|
T Consensus 189 Ggtek~lr~wDprt~~kimkLrGHTdNVr~l---l~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~ 265 (735)
T KOG0308|consen 189 GGTEKDLRLWDPRTCKKIMKLRGHTDNVRVL---LVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSP 265 (735)
T ss_pred cCcccceEEeccccccceeeeeccccceEEE---EEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCC
Confidence 9999999999999999999999998876554 3457999999999999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCccEEEccc
Q 020798 298 TENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 298 ~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+=..+.+|+. ||.|..=|+
T Consensus 266 sf~~vYsG~r--d~~i~~Tdl 284 (735)
T KOG0308|consen 266 SFTHVYSGGR--DGNIYRTDL 284 (735)
T ss_pred CcceEEecCC--CCcEEeccc
Confidence 9999999984 577766554
No 112
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.96 E-value=8.9e-26 Score=186.36 Aligned_cols=270 Identities=19% Similarity=0.273 Sum_probs=196.0
Q ss_pred CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEE-EEEeCCCcEEEEecCCcceeeeeec
Q 020798 35 GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFL-VSASDDKTIRLWDVPTATCLKTLIG 113 (321)
Q Consensus 35 g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~ 113 (321)
++.+++++.|+.+.+|++... ..+..+..+. .+..++|+|+++.+ ++++.++.|++||..+++....+..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~--------~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 71 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATL--------EVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPS 71 (300)
T ss_pred CcEEEEecCCCEEEEEECCCC--------ceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccC
Confidence 357889999999999987532 2334444443 46789999999876 5667889999999998877665554
Q ss_pred CcccEEEEEECCCCCEEEE-eeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC-eEEEEeCCCCce
Q 020798 114 HTNYVFCVNFNPQSNMIVS-GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG-LCRIWDASTGHC 191 (321)
Q Consensus 114 ~~~~v~~~~~~~~~~~l~~-~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~~d~~~~~~ 191 (321)
+.. +..++++|+++.+++ ++.++.+++||+++.+.+..++. ...+..++|+|++..++++..++ .+.+||.++++.
T Consensus 72 ~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~ 149 (300)
T TIGR03866 72 GPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEI 149 (300)
T ss_pred CCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeE
Confidence 433 467889999987755 45689999999998877766653 33467899999999998888765 567789887765
Q ss_pred eeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcEEEEEeccC-----CceeEEEeEEEecCCeEEE-EeC
Q 020798 192 MKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKILKTYTGHT-----NSKYCISSTFSVTNGKYIV-SGS 264 (321)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~-~~~ 264 (321)
....... .....+.|+|+|+++++++ .++.|++||+.+++.+..+..+. .........+ .+++++++ +.+
T Consensus 150 ~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-s~dg~~~~~~~~ 226 (300)
T TIGR03866 150 VDNVLVD--QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKL-TKDGKTAFVALG 226 (300)
T ss_pred EEEEEcC--CCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEE-CCCCCEEEEEcC
Confidence 5443322 2346789999999886554 58999999999988776654221 1111112223 46777644 445
Q ss_pred CCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 265 EDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 265 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.++.+.+||+++++.+..+. +...+.+++|+|++.+|++++. .++.|++||.+.
T Consensus 227 ~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~-~~~~i~v~d~~~ 280 (300)
T TIGR03866 227 PANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNG-VSNDVSVIDVAA 280 (300)
T ss_pred CCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcC-CCCeEEEEECCC
Confidence 67789999999888766543 3457899999999999988753 357899999864
No 113
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.96 E-value=6.2e-27 Score=199.69 Aligned_cols=298 Identities=21% Similarity=0.362 Sum_probs=231.6
Q ss_pred ceeeeeccCCcccEEEEEECCCCCE-EEEecCCceEEEeeccccCCCCC-------------------------------
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRL-LASSSADKTLLTYSLSSISNSDS------------------------------- 60 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~-l~~~~~d~~v~~~~~~~~~~~~~------------------------------- 60 (321)
..+...++.--+.|+.++|..||+. +|+|+..|.+.+||+++......
T Consensus 234 dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk 313 (910)
T KOG1539|consen 234 DKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLK 313 (910)
T ss_pred CcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCcee
Confidence 3344444433489999999999975 67777789999999976431100
Q ss_pred --------CCCCcccccccccccEEEEEEC-CCCCEEEEEeCCCcEEEEecCC---------------------------
Q 020798 61 --------TPPSPLQKFTGHEQGVSDLVFS-SDSRFLVSASDDKTIRLWDVPT--------------------------- 104 (321)
Q Consensus 61 --------~~~~~~~~~~~h~~~i~~~~~~-~~~~~l~~~~~d~~i~iwd~~~--------------------------- 104 (321)
..+..++.-.||..+..++.|. .+|.++.+++.|++++.+++..
T Consensus 314 ~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~ 393 (910)
T KOG1539|consen 314 VWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKL 393 (910)
T ss_pred EEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhh
Confidence 0011223335788899999998 6788999999998877776410
Q ss_pred --------------------------------------cceeeeeecCc------ccEEEEEECCCCCEEEEeeCCCcEE
Q 020798 105 --------------------------------------ATCLKTLIGHT------NYVFCVNFNPQSNMIVSGAFDETVR 140 (321)
Q Consensus 105 --------------------------------------~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~dg~i~ 140 (321)
.+.-.-...+. ..+.+++.++.|++.+.|...|.|-
T Consensus 394 k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id 473 (910)
T KOG1539|consen 394 KLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTID 473 (910)
T ss_pred cCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEE
Confidence 00000000122 4678899999999999999999999
Q ss_pred EEecCCCEEEEEE---eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEE
Q 020798 141 IWDVKTGKCLKVL---PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 141 ~wd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
+|++++|-....+ +.|..+|+.++....++.+++++.+|.+++||..+......+.. ...+..+..+.....+++
T Consensus 474 ~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l--~~~~~~iv~hr~s~l~a~ 551 (910)
T KOG1539|consen 474 RFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRL--GSSITGIVYHRVSDLLAI 551 (910)
T ss_pred EEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeecc--CCCcceeeeeehhhhhhh
Confidence 9999999887777 68999999999988888999999999999999987765555432 345667778887788899
Q ss_pred EecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecC
Q 020798 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p 297 (321)
+..|-.|+++|..+.+.++.+.+|.+.... ..+++||++|++++.|++||+||+.++.++..+. -..+.+++.|+|
T Consensus 552 ~~ddf~I~vvD~~t~kvvR~f~gh~nritd---~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SP 627 (910)
T KOG1539|consen 552 ALDDFSIRVVDVVTRKVVREFWGHGNRITD---MTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSP 627 (910)
T ss_pred hcCceeEEEEEchhhhhhHHhhccccceee---eEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECC
Confidence 999999999999999999999999886543 3345899999999999999999999999887664 356889999999
Q ss_pred CCceEEEEeecCCccEEEcc
Q 020798 298 TENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 298 ~~~~l~s~~~d~~~~i~iw~ 317 (321)
+|.+|||...|.. -|++|.
T Consensus 628 ngD~LAT~Hvd~~-gIylWs 646 (910)
T KOG1539|consen 628 NGDFLATVHVDQN-GIYLWS 646 (910)
T ss_pred CCCEEEEEEecCc-eEEEEE
Confidence 9999999998854 489996
No 114
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.5e-27 Score=178.81 Aligned_cols=238 Identities=25% Similarity=0.392 Sum_probs=183.7
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 152 (321)
+..|+++.|+|.+..|++++.||++++|++..... +....|..++.+++|.+ ...+++|+.||.|+.+|+.+++. ..
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l-~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~-~~ 89 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSL-KLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE-DQ 89 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhh-hhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCcc-ee
Confidence 57899999999999999999999999999988854 33445899999999987 46789999999999999988764 44
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~ 232 (321)
+..|..++.++.+.+....+++|+.|++|++||.+........ .....|.+ .+-.|+.|++|+.+..+.+||+++.
T Consensus 90 igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~--d~~kkVy~--~~v~g~~LvVg~~~r~v~iyDLRn~ 165 (323)
T KOG1036|consen 90 IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTF--DQGKKVYC--MDVSGNRLVVGTSDRKVLIYDLRNL 165 (323)
T ss_pred eccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccc--ccCceEEE--EeccCCEEEEeecCceEEEEEcccc
Confidence 5679999999999998889999999999999999974333332 22234544 4456788999999999999999986
Q ss_pred cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc----eEEEEecCCC---------CCeEEEEecCCC
Q 020798 233 KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR----KVVQKLEGHT---------DPVISVASHPTE 299 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~h~---------~~v~~~~~~p~~ 299 (321)
....+.. .....+.+.+....|++.-+++++-||.|.+=.+... +.-..++.|. .||++++|||-.
T Consensus 166 ~~~~q~r-eS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~ 244 (323)
T KOG1036|consen 166 DEPFQRR-ESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIH 244 (323)
T ss_pred cchhhhc-cccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecccc
Confidence 5443221 1223344444444567888899999999987555443 2223344553 389999999999
Q ss_pred ceEEEEeecCCccEEEccccc
Q 020798 300 NIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 300 ~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..||||+ +||.|.+||...
T Consensus 245 ~tfaTgG--sDG~V~~Wd~~~ 263 (323)
T KOG1036|consen 245 GTFATGG--SDGIVNIWDLFN 263 (323)
T ss_pred ceEEecC--CCceEEEccCcc
Confidence 9999998 569999999853
No 115
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=8.1e-28 Score=177.71 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=193.4
Q ss_pred ccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc---eeeeeecCcccEEEEEECC--CCCEEEEeeCCCcEEEEec
Q 020798 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT---CLKTLIGHTNYVFCVNFNP--QSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 70 ~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~ 144 (321)
+.|++-|.++...-.|+.|+|++.|+.|+|+..+.+. .+..+.+|.++++.++|.. -|++|++++.||.|.+|.-
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 5788889988888899999999999999999987653 5678899999999999975 6899999999999999998
Q ss_pred CCCE--EEEEEeCCCCCeeEEEEccC--CCEEEEEeCCCeEEEEeCCCC--ceeeeeccCCCCCeEEEEEccC---C---
Q 020798 145 KTGK--CLKVLPAHSDPVTAVDFNRD--GTMIVTSSYDGLCRIWDASTG--HCMKTLIDDENPPVSFVKFSPN---G--- 212 (321)
Q Consensus 145 ~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~---g--- 212 (321)
.+++ .......|...|++++|.|. |-.|++++.||.|.+.+.+.. -....+...|...++.+.|.|. |
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 7764 23345678999999999996 457889999999999987643 3344555667778999999986 4
Q ss_pred --------CEEEEEecCCeEEEEeCCCCc--EEEEEeccCCceeEEEeEEEe-cCCeEEEEeCCCCeEEEEEcccce---
Q 020798 213 --------KFILVGTLDNTLRLWNYSTGK--ILKTYTGHTNSKYCISSTFSV-TNGKYIVSGSEDSCVYLWELQSRK--- 278 (321)
Q Consensus 213 --------~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~--- 278 (321)
+.|++|+.|+.|+||+..+++ ..+.+.+|..-+.-+..+... .....||++++||+|.||......
T Consensus 168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~w 247 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPW 247 (299)
T ss_pred ccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcc
Confidence 568999999999999987753 334467776543333222111 124689999999999999875321
Q ss_pred EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 279 VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 279 ~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
....++.....+..++|++.|+.|+.++ +|..|.+|.-.
T Consensus 248 k~tll~~f~~~~w~vSWS~sGn~LaVs~--GdNkvtlwke~ 286 (299)
T KOG1332|consen 248 KKTLLEEFPDVVWRVSWSLSGNILAVSG--GDNKVTLWKEN 286 (299)
T ss_pred cccccccCCcceEEEEEeccccEEEEec--CCcEEEEEEeC
Confidence 1223444667899999999999999987 55789999753
No 116
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=7.8e-26 Score=188.96 Aligned_cols=276 Identities=21% Similarity=0.323 Sum_probs=220.2
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccc-cccEEEEEECCCCCEEEEEeCCCcE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGH-EQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
+.--..+|.++||+.+.+.||.+-.+|.|.+|.+... ......+.++ ++.|.+++|++. ..|++.+.+|+|
T Consensus 21 ~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~-------w~~~~vi~g~~drsIE~L~W~e~-~RLFS~g~sg~i 92 (691)
T KOG2048|consen 21 VDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNN-------WFLEPVIHGPEDRSIESLAWAEG-GRLFSSGLSGSI 92 (691)
T ss_pred EeeeccceEEEEEeccCCceeeeccCCcEEEEccCCC-------ceeeEEEecCCCCceeeEEEccC-CeEEeecCCceE
Confidence 3445789999999999999999999999999987542 1122233443 467999999955 458888999999
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE--EEeCCCCCeeEEEEccCCCEEEEE
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK--VLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
.-||+.+.+....+....+.|++++.+|.+..++.|+.||.++.++...++... .+....+.+.+++|+|++..++.|
T Consensus 93 ~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~G 172 (691)
T KOG2048|consen 93 TEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGG 172 (691)
T ss_pred EEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEec
Confidence 999999999888888888999999999999999999999988888887776544 334456889999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeeec------cC-CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEE
Q 020798 176 SYDGLCRIWDASTGHCMKTLI------DD-ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~------~~-~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 248 (321)
+.||.|++||..++....... .. ....+.++.+-.++ .|++|.+.|.|++||...+.+++.+..|...+.++
T Consensus 173 s~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~L 251 (691)
T KOG2048|consen 173 SIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLAL 251 (691)
T ss_pred ccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhhhhcceeEE
Confidence 999999999999887655211 11 22345666666555 68899999999999999999999999988887666
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEcccceE----EEEecCCCCCeEEEEecCCCceEEEEeec
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKV----VQKLEGHTDPVISVASHPTENIIASGALD 308 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~h~~~v~~~~~~p~~~~l~s~~~d 308 (321)
.. .+++.++.+++-|+.|.-|...+.+. ......|...|.+++..++ .+.+|+.|
T Consensus 252 av---~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d 310 (691)
T KOG2048|consen 252 AV---ADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRD 310 (691)
T ss_pred EE---cCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEeccee
Confidence 54 36678899999999998888765532 2334568889999998766 88888866
No 117
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=7.4e-27 Score=187.19 Aligned_cols=229 Identities=23% Similarity=0.414 Sum_probs=192.3
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC-------
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK------- 145 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~------- 145 (321)
.+.|.+++-+|+|.+|+.|+..|.|++|.+.++..+..+.+|-..|+|+.|+.|+..|++|+.||.|.+|++.
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~ 160 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADN 160 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccccc
Confidence 4679999999999999999899999999999999998899999999999999999999999999999999862
Q ss_pred --CCEEEEEEeCCCCCeeEEEEccCC--CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC
Q 020798 146 --TGKCLKVLPAHSDPVTAVDFNRDG--TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 146 --~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d 221 (321)
+.++...+..|.-+|+++...+.| .++++++.|.++++||+..+..+..+.. ...+.+++.+|.+..+++|+.+
T Consensus 161 ~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f--p~si~av~lDpae~~~yiGt~~ 238 (476)
T KOG0646|consen 161 DHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF--PSSIKAVALDPAERVVYIGTEE 238 (476)
T ss_pred CCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec--CCcceeEEEcccccEEEecCCc
Confidence 335667788899999999887753 4899999999999999999987777643 4568899999999999999999
Q ss_pred CeEEEEeCCCC----------------cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC
Q 020798 222 NTLRLWNYSTG----------------KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 222 ~~i~i~d~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
|.|.+.++... ..+..+.+|.+. ..+++.....||..|++|+.||.|+|||+.+.++++++..
T Consensus 239 G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~-~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~ 317 (476)
T KOG0646|consen 239 GKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENE-SAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQT 317 (476)
T ss_pred ceEEeeehhcCCcccccccccccccccceeeeeccccCC-cceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhh
Confidence 99998886432 234456667661 1244444457899999999999999999999998888776
Q ss_pred CCCCeEEEEecCCCceEEE
Q 020798 286 HTDPVISVASHPTENIIAS 304 (321)
Q Consensus 286 h~~~v~~~~~~p~~~~l~s 304 (321)
..++|+.+.+.|-.+-...
T Consensus 318 ~kgpVtnL~i~~~~~~~~l 336 (476)
T KOG0646|consen 318 SKGPVTNLQINPLERGIIL 336 (476)
T ss_pred hccccceeEeeccccceec
Confidence 6789999999877554443
No 118
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=4e-27 Score=180.59 Aligned_cols=272 Identities=27% Similarity=0.436 Sum_probs=209.6
Q ss_pred CCcccc--ccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeecc------cc---------C--------
Q 020798 2 SSDQSL--ESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLS------SI---------S-------- 56 (321)
Q Consensus 2 ~~~~~~--~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~------~~---------~-------- 56 (321)
|.|++. =+.........+.||.+.|.+++|++.+.++++++.|++..||... .. +
T Consensus 167 SADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~ 246 (481)
T KOG0300|consen 167 SADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEH 246 (481)
T ss_pred ccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccc
Confidence 445433 2333444567789999999999999999999999999999999511 00 0
Q ss_pred --------CCCC-CCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCC
Q 020798 57 --------NSDS-TPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS 127 (321)
Q Consensus 57 --------~~~~-~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 127 (321)
..+. ...-|+..+++|...|.+..|-..|+.+++++.|.+..+||++++..+..+.+|....+.++-+|.-
T Consensus 247 ~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQ 326 (481)
T KOG0300|consen 247 NRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQ 326 (481)
T ss_pred ccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcc
Confidence 0000 0112566788999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce-eeeeccCCCCCeEE
Q 020798 128 NMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC-MKTLIDDENPPVSF 205 (321)
Q Consensus 128 ~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~ 205 (321)
+.+++++.|.+.++||++.. ..+..|++|...|+++.|..+. .+++++.|.+|++||+++-.. +..+. ...+++.
T Consensus 327 rLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIR--tdS~~NR 403 (481)
T KOG0300|consen 327 RLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIR--TDSPANR 403 (481)
T ss_pred eEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceeecCCCceEEEeeeccccCcceeee--cCCccce
Confidence 99999999999999999843 3567889999999999998765 578999999999999986432 33332 2456788
Q ss_pred EEEccCCCEEEEEecCCeEEEEeCCCCcEEE----EEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc
Q 020798 206 VKFSPNGKFILVGTLDNTLRLWNYSTGKILK----TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR 277 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (321)
++.+..++.++.-..+..|++||+...++.+ .-++|...+.|....--.+ -.-|++++.|..+.=|.+...
T Consensus 404 vavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp-~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 404 VAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHP-ACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred eEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCc-ccccccccccceeeeeEeccc
Confidence 9999999999999989999999987554322 2245555444433222222 234778899999999998654
No 119
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=4.2e-28 Score=188.64 Aligned_cols=241 Identities=20% Similarity=0.363 Sum_probs=194.2
Q ss_pred ccccccccccEEEEEECCCC-CEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
+..+.+|.++|.+++=+|.. ..+++|+.||.|+|||+....+...+.+|.+.|..+++.. ..+++++.|.+|+.|-+
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~ 136 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI 136 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeec
Confidence 44568999999999999976 7899999999999999999999999999999999999987 67889999999999987
Q ss_pred CCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCE-EEEEecCCe
Q 020798 145 KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKF-ILVGTLDNT 223 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~~~d~~ 223 (321)
... +..++.+ ...+..+.-+..+..+++|+.+ |.+||..-..++..+.-. -..+.++.|+|.... |+++.+|+.
T Consensus 137 ~~~-p~~tilg-~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~R~~Pv~smswG-~Dti~svkfNpvETsILas~~sDrs 211 (433)
T KOG0268|consen 137 DGP-PLHTILG-KSVYLGIDHHRKNSVFATCGEQ--IDIWDEQRDNPVSSMSWG-ADSISSVKFNPVETSILASCASDRS 211 (433)
T ss_pred cCC-cceeeec-cccccccccccccccccccCce--eeecccccCCccceeecC-CCceeEEecCCCcchheeeeccCCc
Confidence 653 4444433 4556677777777788888765 889998655555554333 235788999997655 555669999
Q ss_pred EEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc-eEEEEecCCCCCeEEEEecCCCceE
Q 020798 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR-KVVQKLEGHTDPVISVASHPTENII 302 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l 302 (321)
|.+||++.+++++.......+ -..+|.+ ++..+++|++|..++.||++.. ..+....+|.++|.++.|+|.|..+
T Consensus 212 IvLyD~R~~~Pl~KVi~~mRT---N~IswnP-eafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Ef 287 (433)
T KOG0268|consen 212 IVLYDLRQASPLKKVILTMRT---NTICWNP-EAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEF 287 (433)
T ss_pred eEEEecccCCccceeeeeccc---cceecCc-cccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchh
Confidence 999999999888776433222 2234554 7888999999999999999875 4567788999999999999999999
Q ss_pred EEEeecCCccEEEcccc
Q 020798 303 ASGALDNDRTVKIWTQE 319 (321)
Q Consensus 303 ~s~~~d~~~~i~iw~~~ 319 (321)
++||.| .+|+||...
T Consensus 288 vsgsyD--ksIRIf~~~ 302 (433)
T KOG0268|consen 288 VSGSYD--KSIRIFPVN 302 (433)
T ss_pred cccccc--ceEEEeecC
Confidence 999986 789999865
No 120
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.96 E-value=7.7e-27 Score=193.74 Aligned_cols=288 Identities=24% Similarity=0.410 Sum_probs=211.0
Q ss_pred EEEECCC---CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 28 SVKFSHD---GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 28 ~~~~s~~---g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
+..|++. ..+||.+.+||.|.+++....... .....+..+..|...|.++.|.|-...|++++.|.+++.||+..
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr--~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~ 131 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFR--LEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKT 131 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcc--hhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecc
Confidence 3566642 357999999999999988765432 11222445668999999999999667889999999999999999
Q ss_pred cceeee--eecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCE--------------------E-------EEEEe
Q 020798 105 ATCLKT--LIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGK--------------------C-------LKVLP 154 (321)
Q Consensus 105 ~~~~~~--~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~--------------------~-------~~~~~ 154 (321)
.++... +.+|...+.+++|.|.+ ..|++|+.||.|.+||++-.. . +....
T Consensus 132 s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~k 211 (720)
T KOG0321|consen 132 SRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWK 211 (720)
T ss_pred ceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccc
Confidence 887655 78999999999999965 568899999999999985321 0 00111
Q ss_pred CCCCCeeE---EEEccCCCEEEEEeC-CCeEEEEeCCCCceeeeec--------cC--CCCCeEEEEEccCCCEEEEEec
Q 020798 155 AHSDPVTA---VDFNRDGTMIVTSSY-DGLCRIWDASTGHCMKTLI--------DD--ENPPVSFVKFSPNGKFILVGTL 220 (321)
Q Consensus 155 ~~~~~v~~---~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~--------~~--~~~~~~~~~~~~~g~~l~~~~~ 220 (321)
.+...|.+ +-+..|...|++++. |+.|+|||++......... .. ....+.++..+..|.+|++.+.
T Consensus 212 A~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt 291 (720)
T KOG0321|consen 212 AASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT 291 (720)
T ss_pred cccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEec
Confidence 22333443 444567778888877 9999999998764332110 00 1123566777778999999999
Q ss_pred CCeEEEEeCCCC--cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceE-EEEecCCCCCeEEEEecC
Q 020798 221 DNTLRLWNYSTG--KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV-VQKLEGHTDPVISVASHP 297 (321)
Q Consensus 221 d~~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~p 297 (321)
|+.|.+|++... .++..+.++......+.... .+++.++++|+.|...++|.+.+.+. ...+.+|...|++++|.|
T Consensus 292 D~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~l-Spd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~p 370 (720)
T KOG0321|consen 292 DNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSEL-SPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLP 370 (720)
T ss_pred CCcEEEEeccccCcCchhhccCcccceeeeeeec-CCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeecc
Confidence 999999998764 34555555544444343333 47899999999999999999987654 456789999999999988
Q ss_pred CCc-eEEEEeecCCccEEEccccc
Q 020798 298 TEN-IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 298 ~~~-~l~s~~~d~~~~i~iw~~~~ 320 (321)
... -+|+++ +|-+++||++.+
T Consensus 371 S~~t~v~TcS--dD~~~kiW~l~~ 392 (720)
T KOG0321|consen 371 SATTPVATCS--DDFRVKIWRLSN 392 (720)
T ss_pred ccCCCceeec--cCcceEEEeccC
Confidence 753 366666 357899999854
No 121
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.4e-27 Score=174.44 Aligned_cols=250 Identities=20% Similarity=0.312 Sum_probs=193.7
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--CCCEEEEEeCCC
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--DSRFLVSASDDK 95 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--~~~~l~~~~~d~ 95 (321)
..+.|.+.|..+...--|++||||+.|++|+|+.+... .+..++.++.+|.++|..++|.. .|.+||+++.||
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n-----~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDg 80 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNN-----GQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDG 80 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCC-----CCceeeeEecCCCCCeeEEeecccccCcEeeEeecCc
Confidence 44679999999998888999999999999999987642 22356788999999999999976 799999999999
Q ss_pred cEEEEecCCcce--eeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCC---EEEEEEeCCCCCeeEEEEccC
Q 020798 96 TIRLWDVPTATC--LKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTG---KCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 96 ~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~v~~~~~~~~ 168 (321)
.|.||.-..++- ......|...+++++|.|. |-.|++++.||.|.+.+.+.. ...+....|.-.|++++|.|.
T Consensus 81 kVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa 160 (299)
T KOG1332|consen 81 KVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPA 160 (299)
T ss_pred eEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCc
Confidence 999999877743 3345679999999999996 457899999999999988754 122345678889999999986
Q ss_pred ---C-----------CEEEEEeCCCeEEEEeCCCCce-eeeeccCCCCCeEEEEEccCC----CEEEEEecCCeEEEEeC
Q 020798 169 ---G-----------TMIVTSSYDGLCRIWDASTGHC-MKTLIDDENPPVSFVKFSPNG----KFILVGTLDNTLRLWNY 229 (321)
Q Consensus 169 ---~-----------~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~g----~~l~~~~~d~~i~i~d~ 229 (321)
| ..|++|+.|..|++|+..++.- +...+..|..-+..++|.|.- .+|++++.||++.||..
T Consensus 161 ~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~ 240 (299)
T KOG1332|consen 161 SAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTK 240 (299)
T ss_pred CCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEe
Confidence 4 4699999999999999887532 222245666678889999963 56899999999999986
Q ss_pred CCC-cE--EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 230 STG-KI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 230 ~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
+.. +. ...+.......+.++ ++ ..|..|+.++.|+.|.+|.-.
T Consensus 241 ~~e~e~wk~tll~~f~~~~w~vS--WS-~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 241 DEEYEPWKKTLLEEFPDVVWRVS--WS-LSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred cCccCcccccccccCCcceEEEE--Ee-ccccEEEEecCCcEEEEEEeC
Confidence 532 11 111112223334433 33 569999999999999999754
No 122
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.95 E-value=2.6e-26 Score=192.26 Aligned_cols=236 Identities=27% Similarity=0.475 Sum_probs=194.2
Q ss_pred eeccCCcccEEE-EEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 17 QTLNGHLRAISS-VKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 17 ~~~~~h~~~v~~-~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
..+.+|.+-|.. ++|.+ ++-.|.+|+.|..+.+|.+. ...|+..+.+|+..|.++....++. +++|+.|
T Consensus 51 ~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~--------~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD 121 (745)
T KOG0301|consen 51 HAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLS--------QAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWD 121 (745)
T ss_pred eecccCcceeeccceeccccCcceEeecccceEEEEecC--------CCCchhhhhccccceeeeecCCcCc-eEecccc
Confidence 456778888877 88886 44569999999999999654 4567889999999999999888887 8999999
Q ss_pred CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
.++++|-.. ++...+.+|...|+.+..-|++ .+++|+.|.+|++|.- ++..+++.+|.+.|..+++-+++ .|++
T Consensus 122 ~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flS 195 (745)
T KOG0301|consen 122 STAKVWRIG--ELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLS 195 (745)
T ss_pred cceEEecch--hhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEe
Confidence 999999754 4455689999999999999987 8999999999999964 78889999999999999999875 5889
Q ss_pred EeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
|+.||.|++|++ +++++.++. .|...+.++....++..++++++|++++||+.. ...+.+.-.....++..+.
T Consensus 196 csNDg~Ir~w~~-~ge~l~~~~-ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L--- 268 (745)
T KOG0301|consen 196 CSNDGSIRLWDL-DGEVLLEMH-GHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVL--- 268 (745)
T ss_pred ecCCceEEEEec-cCceeeeee-ccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEe---
Confidence 999999999999 566666653 456678888877888899999999999999866 5666665555555555443
Q ss_pred cCCeEEEEeCCCCeEEEEEcc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~ 275 (321)
++|. +++|++||.||||...
T Consensus 269 ~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 269 LNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred eCCC-EEEeccCceEEEEEec
Confidence 4565 6789999999999875
No 123
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.95 E-value=4.1e-26 Score=182.55 Aligned_cols=298 Identities=21% Similarity=0.270 Sum_probs=220.5
Q ss_pred eeccCCcccEEEEEECCCC--CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeC
Q 020798 17 QTLNGHLRAISSVKFSHDG--RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASD 93 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g--~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~ 93 (321)
...+-|.+.|++++|+|.. +++|+|..-|.|-+|++... .........+..|.++|.+|.|+|. -..+++.+.
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~----~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSy 255 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQ----EKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSY 255 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCC----CCccCceEEeccCCccccceEecCCChhheeeecc
Confidence 3345688999999999965 47899999999999998521 1222334567889999999999995 467889999
Q ss_pred CCcEEEEecCCcce--eeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEE-EEEEeCCCCCeeEEEEccCCC
Q 020798 94 DKTIRLWDVPTATC--LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC-LKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 94 d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 170 (321)
||+|+.-|++.... +.....-...+..+.++.+...++.+..=|...+||++.+.. ...+..|...|.+++++|...
T Consensus 256 DGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p 335 (498)
T KOG4328|consen 256 DGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCP 335 (498)
T ss_pred CceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCc
Confidence 99999999987643 222222334566778887777777777777999999987654 455667888999999999765
Q ss_pred -EEEEEeCCCeEEEEeCCCCceee---eeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC----CCcEEEEEe-cc
Q 020798 171 -MIVTSSYDGLCRIWDASTGHCMK---TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS----TGKILKTYT-GH 241 (321)
Q Consensus 171 -~l~~~~~dg~i~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~----~~~~~~~~~-~~ 241 (321)
++++++.|++.++||++.-.... .....|...|.++.|+|.+-.|++.+.|+.|+|||.. .-.+...+. .+
T Consensus 336 ~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~ 415 (498)
T KOG4328|consen 336 WFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNN 415 (498)
T ss_pred hheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccC
Confidence 68899999999999998532211 1223566779999999988779999999999999973 222333321 11
Q ss_pred CC--ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCC-CeEEE-EecCCCceEEEEeecCCccEEEcc
Q 020798 242 TN--SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD-PVISV-ASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 242 ~~--~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~-~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
.. ....+.+. +.++..++++|..-..|-|||-..++.+..+..... .|.++ .|||-+..+++|+. .-|.|.||.
T Consensus 416 ~t~RwlT~fKA~-W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~-s~Gki~vft 493 (498)
T KOG4328|consen 416 RTGRWLTPFKAA-WDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGN-SSGKIYVFT 493 (498)
T ss_pred cccccccchhhe-eCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCC-ccceEEEEe
Confidence 11 11122222 346888999999999999999988887877665443 67776 79999997787764 357899998
Q ss_pred ccc
Q 020798 318 QEK 320 (321)
Q Consensus 318 ~~~ 320 (321)
-++
T Consensus 494 ~k~ 496 (498)
T KOG4328|consen 494 NKK 496 (498)
T ss_pred cCC
Confidence 775
No 124
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.95 E-value=6.8e-27 Score=189.70 Aligned_cols=251 Identities=21% Similarity=0.358 Sum_probs=184.3
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc----eeeee-ecCcccEEEEEECCCCCEEEEeeCCCcEEE
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT----CLKTL-IGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 141 (321)
..+++|...|.++++.|.|-.|++|+.|..|++||+..-. ..+.+ ......|.++.|++.++.|++.+.....++
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl 240 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKL 240 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeE
Confidence 3567888999999999999999999999999999986432 11222 123446889999999999999988899999
Q ss_pred EecCCCEEEEE------------EeCCCCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeec-----cCCCCCe
Q 020798 142 WDVKTGKCLKV------------LPAHSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLI-----DDENPPV 203 (321)
Q Consensus 142 wd~~~~~~~~~------------~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~-----~~~~~~~ 203 (321)
+|-...+.... -++|...+++.+|+|..+ .|++++.||++++||+...+.....+ ....-++
T Consensus 241 ~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ 320 (641)
T KOG0772|consen 241 LDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPV 320 (641)
T ss_pred EccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCc
Confidence 99543332222 246888899999999754 78999999999999997654322221 1223457
Q ss_pred EEEEEccCCCEEEEEecCCeEEEEeCCCCcE--E-EEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce-E
Q 020798 204 SFVKFSPNGKFILVGTLDNTLRLWNYSTGKI--L-KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK-V 279 (321)
Q Consensus 204 ~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~ 279 (321)
+.++|+++|++|++|+.||.|.+|+...... . ..-..|.. ...+++..++.+|++|++-+.|+++++||+++.+ .
T Consensus 321 tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~-g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkp 399 (641)
T KOG0772|consen 321 TSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLP-GQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKP 399 (641)
T ss_pred eeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCC-CCceeEEEeccccchhhhccCCCceeeeeccccccc
Confidence 8899999999999999999999999755322 1 12233443 1123444445799999999999999999998754 4
Q ss_pred EEEecCC--CCCeEEEEecCCCceEEEEeec----CCccEEEccc
Q 020798 280 VQKLEGH--TDPVISVASHPTENIIASGALD----NDRTVKIWTQ 318 (321)
Q Consensus 280 ~~~~~~h--~~~v~~~~~~p~~~~l~s~~~d----~~~~i~iw~~ 318 (321)
+....+. ..+-+.++|||+.+++++|..- ..+.+.+||.
T Consensus 400 L~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~ 444 (641)
T KOG0772|consen 400 LNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDR 444 (641)
T ss_pred hhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEec
Confidence 4444443 2456899999999999998532 2345666654
No 125
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=6.8e-27 Score=197.98 Aligned_cols=297 Identities=19% Similarity=0.330 Sum_probs=212.2
Q ss_pred ccCCccee-eeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC-CC
Q 020798 8 ESFRPYTL-TQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS-DS 85 (321)
Q Consensus 8 ~~~~~~~~-~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~ 85 (321)
.++.|++- ...++++ ..++.-+++-..++.++ ...+++|............... ..-..-.-.+.++.|.. +.
T Consensus 26 ds~l~~~~~~~~~k~~---~nAIs~nr~~~qiv~AG-rs~lklyai~~~~~~~~~~~~~-k~kqn~~~S~~DVkW~~~~~ 100 (839)
T KOG0269|consen 26 DSYLPYDKMNCKLKAK---ANAISVNRDINQIVVAG-RSLLKLYAINPNDFSEKCNHRF-KTKQNKFYSAADVKWGQLYS 100 (839)
T ss_pred cccccchheeeecccc---cceEeecCCcceeEEec-ccceeeEeeCcccCCcceeeec-ccccceeeehhhcccccchh
Confidence 45556652 2234444 44556778888888877 4577788665432211100000 00000112356788875 46
Q ss_pred CEEEEEeCCCcEEEEecCC---cceeeeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCee
Q 020798 86 RFLVSASDDKTIRLWDVPT---ATCLKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT 161 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~ 161 (321)
++||+++..|.|.+||+.. .+.+..+..|...+.+++|++. .++|++|+.||.|++||++..+...++.+....|.
T Consensus 101 NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiR 180 (839)
T KOG0269|consen 101 NLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIR 180 (839)
T ss_pred hhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhh
Confidence 7999999999999999977 4555567889999999999985 57899999999999999999888888888888999
Q ss_pred EEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 020798 162 AVDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 162 ~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 240 (321)
++.|+|. +..|+++...|.+.+||++........+..|..++.++.|+|++.+|++|+.|++|+|||+.+.+.-....-
T Consensus 181 DV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tI 260 (839)
T KOG0269|consen 181 DVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTI 260 (839)
T ss_pred ceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEE
Confidence 9999995 668999999999999999977655555667889999999999999999999999999999886554333322
Q ss_pred cCCceeEEEeEEEecC-CeEEEEeC--CCCeEEEEEcccce-EEEEecCCCCCeEEEEecC-CCceEEEEeecCCccE
Q 020798 241 HTNSKYCISSTFSVTN-GKYIVSGS--EDSCVYLWELQSRK-VVQKLEGHTDPVISVASHP-TENIIASGALDNDRTV 313 (321)
Q Consensus 241 ~~~~~~~~~~~~~~~~-~~~l~~~~--~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~p-~~~~l~s~~~d~~~~i 313 (321)
++. ..+....+.|. ..+||+++ .|-.|+|||++..- +...+..|...++.++|.. |-..|-+++. |++|
T Consensus 261 nTi--apv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sK--D~tv 334 (839)
T KOG0269|consen 261 NTI--APVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSK--DGTV 334 (839)
T ss_pred eec--ceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecC--ccHH
Confidence 221 22333333343 45566664 57789999998654 3467788999999999964 3455666663 3544
No 126
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.95 E-value=1e-25 Score=188.75 Aligned_cols=304 Identities=25% Similarity=0.409 Sum_probs=228.8
Q ss_pred cceeeeeccCCcccEEEEEECCCCC---EEEEecCCceEEEeeccccCCCC---------CCCCCcc-------------
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGR---LLASSSADKTLLTYSLSSISNSD---------STPPSPL------------- 66 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~---~l~~~~~d~~v~~~~~~~~~~~~---------~~~~~~~------------- 66 (321)
.++....+.||.+.|.+++|+..+. +||++|.|..|++|.+.-..... .....+.
T Consensus 180 ~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ 259 (764)
T KOG1063|consen 180 SFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISF 259 (764)
T ss_pred ceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEeh
Confidence 4677889999999999999986543 78999999999999764322111 0001111
Q ss_pred -cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCccee-------eeeecCcccEEEEEECCCCCEEEEeeCCCc
Q 020798 67 -QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL-------KTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138 (321)
Q Consensus 67 -~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 138 (321)
..+.||++=|+++.|+|++..|++++.|.++.+|...+..-+ ..+.+.....+..-|+|+++.+++-+..|-
T Consensus 260 eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg 339 (764)
T KOG1063|consen 260 EALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGG 339 (764)
T ss_pred hhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCc
Confidence 123489999999999999999999999999999987665321 122334456888999999999999999999
Q ss_pred EEEEecCCC---EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC--------------C------------
Q 020798 139 VRIWDVKTG---KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST--------------G------------ 189 (321)
Q Consensus 139 i~~wd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~--------------~------------ 189 (321)
.++|..+.. .....+.+|.+.|++++|+|.|.+|++.+.|.+-|+|-.-. |
T Consensus 340 ~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~ 419 (764)
T KOG1063|consen 340 FHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNED 419 (764)
T ss_pred EEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCC
Confidence 999983332 22334568999999999999999999999998888763210 0
Q ss_pred ---------ceeee----------------------------------------e-------------------------
Q 020798 190 ---------HCMKT----------------------------------------L------------------------- 195 (321)
Q Consensus 190 ---------~~~~~----------------------------------------~------------------------- 195 (321)
+..+. +
T Consensus 420 ~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~ 499 (764)
T KOG1063|consen 420 LQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCE 499 (764)
T ss_pred ceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchh
Confidence 00000 0
Q ss_pred ---------------------ccCCCCCeEEEEEccCCCEEEEEecC-----CeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 196 ---------------------IDDENPPVSFVKFSPNGKFILVGTLD-----NTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 196 ---------------------~~~~~~~~~~~~~~~~g~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
+-+|...+.+++.+|+|+++++++.. ..|++|+..+...+..+.+|.-.+ +
T Consensus 500 L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTV---T 576 (764)
T KOG1063|consen 500 LTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTV---T 576 (764)
T ss_pred ccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEE---E
Confidence 00122346678999999999998754 359999999988888888887654 4
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceE----EEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKV----VQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
...+++|+++|++.+.|+++.+|....... ....+.|..-|+++.|+|++.++||+|. |..|++|...+
T Consensus 577 ~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSR--DK~VkVW~~~~ 649 (764)
T KOG1063|consen 577 RLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASR--DKKVKVWEEPD 649 (764)
T ss_pred EEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecC--CceEEEEeccC
Confidence 444568999999999999999999854322 2346789999999999999999999995 57999998754
No 127
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.95 E-value=1.9e-25 Score=190.75 Aligned_cols=298 Identities=17% Similarity=0.307 Sum_probs=231.8
Q ss_pred cccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC
Q 020798 7 LESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR 86 (321)
Q Consensus 7 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~ 86 (321)
|-..+..+...+++++...|+++.=+|--..+|.|-.+|.|.++++.. .+.+..++...+.|++++|..||+
T Consensus 186 l~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~--------dkil~sFk~d~g~VtslSFrtDG~ 257 (910)
T KOG1539|consen 186 LWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKF--------DKILMSFKQDWGRVTSLSFRTDGN 257 (910)
T ss_pred EEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEccc--------CcEEEEEEccccceeEEEeccCCC
Confidence 344556667788999999999999999999999999999999998753 334555654458999999999997
Q ss_pred -EEEEEeCCCcEEEEecCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC--C---------------
Q 020798 87 -FLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT--G--------------- 147 (321)
Q Consensus 87 -~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~--~--------------- 147 (321)
.+++|+..|.+.+||++..+.+..+. .|.+.+....+-|....+++++.|..+++|=..+ +
T Consensus 258 p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp 337 (910)
T KOG1539|consen 258 PLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPP 337 (910)
T ss_pred eeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCc
Confidence 55677788999999999887766554 6777777777777777777777777766662110 0
Q ss_pred -------------------------------------E---------------------EEEEE--------------eC
Q 020798 148 -------------------------------------K---------------------CLKVL--------------PA 155 (321)
Q Consensus 148 -------------------------------------~---------------------~~~~~--------------~~ 155 (321)
+ ++..+ ..
T Consensus 338 ~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~ 417 (910)
T KOG1539|consen 338 SCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITA 417 (910)
T ss_pred hheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEE
Confidence 0 00000 00
Q ss_pred -----------------------CC------CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec--cCCCCCeE
Q 020798 156 -----------------------HS------DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI--DDENPPVS 204 (321)
Q Consensus 156 -----------------------~~------~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~ 204 (321)
+. ..+++++.++.|++.+.|...|+|-+|++.+|-....+. ..+..++.
T Consensus 418 h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~ 497 (910)
T KOG1539|consen 418 HKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVT 497 (910)
T ss_pred ecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCcee
Confidence 01 346788888889999999999999999999886666552 35677899
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec
Q 020798 205 FVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE 284 (321)
Q Consensus 205 ~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 284 (321)
.++.+..++.+++++.+|.+++||..+..++..+.-... +...........++.+..|-.|+++|+.+.+.+..+.
T Consensus 498 gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~----~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~ 573 (910)
T KOG1539|consen 498 GLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSS----ITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFW 573 (910)
T ss_pred EEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCC----cceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhh
Confidence 999999999999999999999999998887777643222 2222222345678889999999999999999999999
Q ss_pred CCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 285 GHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 285 ~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
||.+.|++++|||||++|++++.| ++|++||+
T Consensus 574 gh~nritd~~FS~DgrWlisasmD--~tIr~wDl 605 (910)
T KOG1539|consen 574 GHGNRITDMTFSPDGRWLISASMD--STIRTWDL 605 (910)
T ss_pred ccccceeeeEeCCCCcEEEEeecC--CcEEEEec
Confidence 999999999999999999999965 89999997
No 128
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.95 E-value=6e-27 Score=189.59 Aligned_cols=238 Identities=24% Similarity=0.392 Sum_probs=198.3
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP 103 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 103 (321)
.-|.++.+.|||+.|++|++-.++.|||+.. ..+.....++...-..+.++.+||.+.+++++.||.|.|||+.
T Consensus 466 nyiRSckL~pdgrtLivGGeastlsiWDLAa------pTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLh 539 (705)
T KOG0639|consen 466 NYIRSCKLLPDGRTLIVGGEASTLSIWDLAA------PTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLH 539 (705)
T ss_pred cceeeeEecCCCceEEeccccceeeeeeccC------CCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcc
Confidence 4678889999999999999999999999864 2233344444444567889999999999999999999999999
Q ss_pred CcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEE
Q 020798 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183 (321)
Q Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 183 (321)
+...++.+.+|.+.+.||.++++|..|-+|+-|.++|.||++.++...... ....|.++.++|++..+++|-.++.+-+
T Consensus 540 nq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~cP~~dWlavGMens~vev 618 (705)
T KOG0639|consen 540 NQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAVGMENSNVEV 618 (705)
T ss_pred cceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccCCCccceeeecccCcEEE
Confidence 999999999999999999999999999999999999999999987665433 3567999999999999999999998877
Q ss_pred EeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEe
Q 020798 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263 (321)
Q Consensus 184 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (321)
......+ +..+..++..|.++.|.+-|+++++.+.|+-+..|...-|..+...+... . +.++-...|.++++||
T Consensus 619 lh~skp~--kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~S-s---VlsCDIS~ddkyIVTG 692 (705)
T KOG0639|consen 619 LHTSKPE--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-S---VLSCDISFDDKYIVTG 692 (705)
T ss_pred EecCCcc--ceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccC-c---ceeeeeccCceEEEec
Confidence 7665433 33445567789999999999999999999999999998888776655432 2 3334444688999999
Q ss_pred CCCCeEEEEEc
Q 020798 264 SEDSCVYLWEL 274 (321)
Q Consensus 264 ~~dg~i~vwd~ 274 (321)
+.|....||.+
T Consensus 693 SGdkkATVYeV 703 (705)
T KOG0639|consen 693 SGDKKATVYEV 703 (705)
T ss_pred CCCcceEEEEE
Confidence 99999888875
No 129
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=4.5e-27 Score=199.05 Aligned_cols=243 Identities=23% Similarity=0.406 Sum_probs=192.5
Q ss_pred cEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCCCcEEEEec
Q 020798 25 AISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDV 102 (321)
Q Consensus 25 ~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~ 102 (321)
.+..+.|+. +.++|||++..|.|.+||+... .....+..|..|++.++++.|++.. .+|++|+.||.|++||+
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~-----~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~Dl 163 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKS-----IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDL 163 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCcc-----ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEee
Confidence 445577873 5689999999999999999752 2234466789999999999999864 67889999999999999
Q ss_pred CCcceeeeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCe
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGL 180 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 180 (321)
+..+....+.+..+.|..+.|+|. ++.|+++...|.+++||++.. ++...+..|.++|.++.|+|++.+|++|+.|+.
T Consensus 164 R~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~ 243 (839)
T KOG0269|consen 164 RSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKM 243 (839)
T ss_pred ecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCcc
Confidence 998887888888889999999984 678999999999999999865 456677899999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEE-EEEe--cCCeEEEEeCCCC-cEEEEEeccCCceeEEEeEEEecC
Q 020798 181 CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFI-LVGT--LDNTLRLWNYSTG-KILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 181 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~~~~--~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
++|||..+++...........++..++|-|..++. ++++ .|-.|+|||++.. -+...+..|......+ .|...|
T Consensus 244 vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i--~W~~~d 321 (839)
T KOG0269|consen 244 VKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGI--AWDSGD 321 (839)
T ss_pred EEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccce--eccCCC
Confidence 99999986654333333455789999999987664 4443 4778999999754 3456677776654333 333445
Q ss_pred CeEEEEeCCCCeEEEEEc
Q 020798 257 GKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~ 274 (321)
...+.+++.||.|..-.+
T Consensus 322 ~~~l~s~sKD~tv~qh~~ 339 (839)
T KOG0269|consen 322 RINLWSCSKDGTVLQHLF 339 (839)
T ss_pred ceeeEeecCccHHHHhhh
Confidence 678899999998765433
No 130
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=7.4e-25 Score=183.20 Aligned_cols=242 Identities=17% Similarity=0.320 Sum_probs=196.2
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCccee-eeeecC-cccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEE
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL-KTLIGH-TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL 150 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 150 (321)
..+|.+++|+.+.+.||.+-.+|.|.+|++..+=.. ..+.++ ...|..++|++ +..|++.+.+|.|..||+.+.+..
T Consensus 25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~ 103 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQK 103 (691)
T ss_pred ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCcee
Confidence 367999999999999999999999999999876332 333343 45689999994 667889999999999999999999
Q ss_pred EEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceee-eeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 151 KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
..+....++|++++.+|.+..++.|+.||.+..++...++... +.+......+.++.|+|++..++.|+.||.|++||.
T Consensus 104 ~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~ 183 (691)
T KOG2048|consen 104 YNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDV 183 (691)
T ss_pred EEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEc
Confidence 9999899999999999999999999999988888887766543 333444578999999999999999999999999999
Q ss_pred CCCcEEEEEec----cCC-ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEE
Q 020798 230 STGKILKTYTG----HTN-SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304 (321)
Q Consensus 230 ~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 304 (321)
.++..+..... -.. ...++-...+- ....+++|.+.|+|.+||...+.+++.+..|...|.+++..++++++.+
T Consensus 184 ~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L-rd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfs 262 (691)
T KOG2048|consen 184 KSGQTLHIITMQLDRLSKREPTIVWSVLFL-RDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFS 262 (691)
T ss_pred CCCceEEEeeecccccccCCceEEEEEEEe-ecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEE
Confidence 99887663221 111 22222222222 3457999999999999999999999999999999999999999999999
Q ss_pred EeecCCccEEEccc
Q 020798 305 GALDNDRTVKIWTQ 318 (321)
Q Consensus 305 ~~~d~~~~i~iw~~ 318 (321)
++.| +.|.-+..
T Consensus 263 aGvd--~~ii~~~~ 274 (691)
T KOG2048|consen 263 AGVD--PKIIQYSL 274 (691)
T ss_pred ccCC--CceEEEEe
Confidence 9976 55655544
No 131
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.5e-24 Score=165.51 Aligned_cols=246 Identities=22% Similarity=0.437 Sum_probs=184.7
Q ss_pred ccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc----ceeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEe
Q 020798 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA----TCLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWD 143 (321)
Q Consensus 70 ~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd 143 (321)
.+|.+-|+++.|.+.|+.+++|+.|++++|||..+. .+....+.|.+.|..+.|.+. |+.+++++.|+++.+|.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 478899999999999999999999999999996443 455677899999999999764 78899999999999997
Q ss_pred cCCC---------EEEEEEeCCCCCeeEEEEccC--CCEEEEEeCCCeEEEEeCCCCceeeee------c------cCCC
Q 020798 144 VKTG---------KCLKVLPAHSDPVTAVDFNRD--GTMIVTSSYDGLCRIWDASTGHCMKTL------I------DDEN 200 (321)
Q Consensus 144 ~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~------~------~~~~ 200 (321)
-... .....+......|+++.|.|. |-.+++++.||.+|+|+......+... . ....
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 5211 123455566788999999995 668999999999999987553222211 1 1223
Q ss_pred CCeEEEEEccC---CCEEEEEecC-----CeEEEEeCCCC----cEEEEEeccCCceeEEEeEEEe-cCCeEEEEeCCCC
Q 020798 201 PPVSFVKFSPN---GKFILVGTLD-----NTLRLWNYSTG----KILKTYTGHTNSKYCISSTFSV-TNGKYIVSGSEDS 267 (321)
Q Consensus 201 ~~~~~~~~~~~---g~~l~~~~~d-----~~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~dg 267 (321)
.+..++.|+|. ..+|++|+.+ +.+.||..... ..+..+.++..++..+.+.... ..-..||+++.||
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg 249 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG 249 (361)
T ss_pred CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc
Confidence 45667889874 4677777755 47888875432 3455667777776655433111 1235799999999
Q ss_pred eEEEEEcccc--------------------eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 268 CVYLWELQSR--------------------KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 268 ~i~vwd~~~~--------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
|+||.+... +.+..+.+|..+|+.+.|+-.|..|++.| .||.|++|..
T Consensus 250 -v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStG--dDG~VRLWka 317 (361)
T KOG2445|consen 250 -VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTG--DDGCVRLWKA 317 (361)
T ss_pred -EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecC--CCceeeehhh
Confidence 999998621 23556788999999999999999999988 4699999975
No 132
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.95 E-value=3.6e-25 Score=174.77 Aligned_cols=304 Identities=19% Similarity=0.342 Sum_probs=215.2
Q ss_pred cceeeeeccCCcccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCC-CCCCcccccccccccEEEEEECCCCCEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDS-TPPSPLQKFTGHEQGVSDLVFSSDSRFLV 89 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~~~~~~l~ 89 (321)
++.+...+. -..+|..+.|.+++. .||||+.|..|++|.+........ .....+..+..|.+.|+.+.|+|+|+.|+
T Consensus 3 ~~~~ei~wH-~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLA 81 (434)
T KOG1009|consen 3 AYPIEISWH-DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLA 81 (434)
T ss_pred ceeeEEEec-CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeee
Confidence 344444443 246899999998876 999999999999998876443221 22334567789999999999999999999
Q ss_pred EEeCCCcEEEEecC--------C--------cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 90 SASDDKTIRLWDVP--------T--------ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 90 ~~~~d~~i~iwd~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
+|+.+|.+.+|-.. + ....+.+.+|...+..++|+|+++++++++.|..+++||+..|.....+
T Consensus 82 Sg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~ 161 (434)
T KOG1009|consen 82 SGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAIL 161 (434)
T ss_pred ecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeec
Confidence 99999999999755 2 1233456789999999999999999999999999999999999999999
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee-----cc----C---------CC----CCeEEEEEccC
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL-----ID----D---------EN----PPVSFVKFSPN 211 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-----~~----~---------~~----~~~~~~~~~~~ 211 (321)
..|...+..++|.|-+.++++-+.|...+.+.+...+..... .. + ++ .-...++|+|+
T Consensus 162 ~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPd 241 (434)
T KOG1009|consen 162 DDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPD 241 (434)
T ss_pred cccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCC
Confidence 999999999999999999988888776666665432211110 00 0 00 11234688999
Q ss_pred CCEEEEEec----CC-----eEEEEeCCC-CcEEEEEeccCCceeEEEeE---------------EEecCCeEEEEeCCC
Q 020798 212 GKFILVGTL----DN-----TLRLWNYST-GKILKTYTGHTNSKYCISST---------------FSVTNGKYIVSGSED 266 (321)
Q Consensus 212 g~~l~~~~~----d~-----~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~~~d 266 (321)
|.++++... .+ ..++|+-.. .++...+++...+...+.++ +..|-+..+|.++.
T Consensus 242 G~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~- 320 (434)
T KOG1009|consen 242 GSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK- 320 (434)
T ss_pred CcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeec-
Confidence 999887531 22 234554322 12333333333322222111 11223445666665
Q ss_pred CeEEEEEcccceEEEEecC-CCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 267 SCVYLWELQSRKVVQKLEG-HTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 267 g~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
..|+|||.++.+++....+ |-.+|++++|+++|..|+..|.| |...+-..|
T Consensus 321 ~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~D--GyCS~vtfe 372 (434)
T KOG1009|consen 321 NSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTD--GFCSLVTFE 372 (434)
T ss_pred ceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccC--CceEEEEEc
Confidence 5799999998877766544 88899999999999999999866 555554444
No 133
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.95 E-value=1.7e-23 Score=172.72 Aligned_cols=266 Identities=17% Similarity=0.213 Sum_probs=188.9
Q ss_pred eeeeccCCcccEEEEEECCCCCEE-EEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE-e
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLL-ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA-S 92 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~-~ 92 (321)
..+.+.+|. .+..++|+|+|+.+ ++++.++.+.+|+..... ....+..+. .+..+.|+|+++.++++ +
T Consensus 23 ~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~-~~~~~~~~~~g~~l~~~~~ 92 (300)
T TIGR03866 23 VTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGE--------VIGTLPSGP-DPELFALHPNGKILYIANE 92 (300)
T ss_pred eEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCc--------EEEeccCCC-CccEEEECCCCCEEEEEcC
Confidence 445555554 46789999999976 567789999999875421 122233232 35678999999877654 5
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCC-cEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCE
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE-TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 171 (321)
.++.+++||+.+.+.+..+.. ...+..++++|++..++++..++ .+.+||.++++....... ......++|+|+++.
T Consensus 93 ~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~ 170 (300)
T TIGR03866 93 DDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKE 170 (300)
T ss_pred CCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCE
Confidence 689999999998776655542 23467899999999998888765 467789988776655443 234577999999998
Q ss_pred EEEE-eCCCeEEEEeCCCCceeeeeccC------CCCCeEEEEEccCCCEEEEE-ecCCeEEEEeCCCCcEEEEEeccCC
Q 020798 172 IVTS-SYDGLCRIWDASTGHCMKTLIDD------ENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYSTGKILKTYTGHTN 243 (321)
Q Consensus 172 l~~~-~~dg~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~ 243 (321)
++++ ..++.+++||+++++....+... .......++|+|++++++++ ..++.+.+||+.+++.+..+... .
T Consensus 171 l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~ 249 (300)
T TIGR03866 171 LWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVG-Q 249 (300)
T ss_pred EEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeC-C
Confidence 7654 46899999999988765544211 01123457899999986554 45678999999988877655322 2
Q ss_pred ceeEEEeEEEecCCeEEEEe-CCCCeEEEEEcccceEEEEecCCCCCeEEEEecC
Q 020798 244 SKYCISSTFSVTNGKYIVSG-SEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297 (321)
Q Consensus 244 ~~~~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p 297 (321)
....+ ...+++++|+++ ..+|.|++||+.+++.+.+++... ..++++++|
T Consensus 250 ~~~~~---~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~~~ 300 (300)
T TIGR03866 250 RVWQL---AFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGR-LPWGVVVRP 300 (300)
T ss_pred CcceE---EECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEccc-ccceeEeCC
Confidence 33333 334788888876 568999999999999988887654 448888876
No 134
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=7.9e-25 Score=175.63 Aligned_cols=228 Identities=21% Similarity=0.371 Sum_probs=182.0
Q ss_pred CEEEEEeC-CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 86 RFLVSASD-DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 86 ~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
.+++++.. -..+.+|.+..........--.+.+.+++-+|+|.+++.|+..|.|++|.+.+|+.+..+..|-.+|+++.
T Consensus 51 ~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~ 130 (476)
T KOG0646|consen 51 EYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLK 130 (476)
T ss_pred hheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEE
Confidence 56665543 34788999876654443334567899999999999999988999999999999999999999999999999
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCC--------ceeeeeccCCCCCeEEEEEccC--CCEEEEEecCCeEEEEeCCCCcE
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTG--------HCMKTLIDDENPPVSFVKFSPN--GKFILVGTLDNTLRLWNYSTGKI 234 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~--g~~l~~~~~d~~i~i~d~~~~~~ 234 (321)
|+-|+.+|++++.||.|.+|++..- ........+|.-+|+.+...+. ..++++++.|.++++||+..+.+
T Consensus 131 fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~L 210 (476)
T KOG0646|consen 131 FSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVL 210 (476)
T ss_pred EeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEecccee
Confidence 9999999999999999999986321 1122334566777888877664 46789999999999999999998
Q ss_pred EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc----------------eEEEEecCCCC--CeEEEEec
Q 020798 235 LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR----------------KVVQKLEGHTD--PVISVASH 296 (321)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~----------------~~~~~~~~h~~--~v~~~~~~ 296 (321)
+..+.... .+.++...|..+.+.+|+.+|.|.+.++... ..+..+.||.+ +|++++.+
T Consensus 211 Llti~fp~----si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais 286 (476)
T KOG0646|consen 211 LLTITFPS----SIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIS 286 (476)
T ss_pred eEEEecCC----cceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEe
Confidence 88875432 2344445577889999999999998877432 23556788988 99999999
Q ss_pred CCCceEEEEeecCCccEEEcccc
Q 020798 297 PTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 297 p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
-||..|++|+ .||.|.|||..
T Consensus 287 ~DgtlLlSGd--~dg~VcvWdi~ 307 (476)
T KOG0646|consen 287 TDGTLLLSGD--EDGKVCVWDIY 307 (476)
T ss_pred cCccEEEeeC--CCCCEEEEecc
Confidence 9999999997 56899999974
No 135
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.94 E-value=1.3e-24 Score=183.10 Aligned_cols=286 Identities=17% Similarity=0.296 Sum_probs=214.1
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-----------CCEEEEEeCC
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-----------SRFLVSASDD 94 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-----------~~~l~~~~~d 94 (321)
.-++.|+|....|....+|..+.+||+.+.... .....+--|...|.++..-|. ..-+.+++.|
T Consensus 327 ~IA~~Fdet~~klscVYndhSlYvWDvrD~~kv-----gk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD 401 (1080)
T KOG1408|consen 327 AIACQFDETTDKLSCVYNDHSLYVWDVRDVNKV-----GKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSD 401 (1080)
T ss_pred eeEEEecCCCceEEEEEcCceEEEEeccccccc-----cceeeeeeccceeeeeccccccccCcccccCCccceeEecCC
Confidence 346789999999999999999999999875432 122333457777776654431 1247899999
Q ss_pred CcEEEEecCCcc---eee----------------------------------eeecCcccEEEEEECCCCCEEEEeeCCC
Q 020798 95 KTIRLWDVPTAT---CLK----------------------------------TLIGHTNYVFCVNFNPQSNMIVSGAFDE 137 (321)
Q Consensus 95 ~~i~iwd~~~~~---~~~----------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg 137 (321)
++|++||++... ..+ ........+.+++++|++..|++|..-|
T Consensus 402 ~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~G 481 (1080)
T KOG1408|consen 402 GTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGG 481 (1080)
T ss_pred CcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccC
Confidence 999999986521 100 0011234588999999999999999999
Q ss_pred cEEEEecCCCEEEEEEeCCCCCeeEEEEccC---CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC--
Q 020798 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD---GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG-- 212 (321)
Q Consensus 138 ~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 212 (321)
++++|++..-+....+..|+..|.++.|+.. .++|++++.|..|++||......+...+.+|...|+.+.|...|
T Consensus 482 nlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln 561 (1080)
T KOG1408|consen 482 NLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLN 561 (1080)
T ss_pred ceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCc
Confidence 9999999998888889999999999999852 45789999999999999976655555566778889999999877
Q ss_pred CEEEEEecCCeEEEEeCCCCcEEEEEeccCCc--eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC---CC
Q 020798 213 KFILVGTLDNTLRLWNYSTGKILKTYTGHTNS--KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG---HT 287 (321)
Q Consensus 213 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---h~ 287 (321)
..+++++.|..|.+=-.++...-..+..++.. ...+--....++..++++++.|+.|+||+++++++.+.+++ |.
T Consensus 562 ~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~e 641 (1080)
T KOG1408|consen 562 RKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHE 641 (1080)
T ss_pred eEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCC
Confidence 66778888886654332222222233332221 11122223346788999999999999999999999988876 66
Q ss_pred CCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 288 DPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 288 ~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+....+...|.|.|||+... |+++.++|.
T Consensus 642 G~lIKv~lDPSgiY~atScs--dktl~~~Df 670 (1080)
T KOG1408|consen 642 GDLIKVILDPSGIYLATSCS--DKTLCFVDF 670 (1080)
T ss_pred CceEEEEECCCccEEEEeec--CCceEEEEe
Confidence 78999999999999999884 578999886
No 136
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.94 E-value=1.4e-24 Score=166.81 Aligned_cols=278 Identities=18% Similarity=0.344 Sum_probs=201.7
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCC-C--c-ccccc-cccccEEEEEEC-------CCCCEEEEEeC
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPP-S--P-LQKFT-GHEQGVSDLVFS-------SDSRFLVSASD 93 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~-~--~-~~~~~-~h~~~i~~~~~~-------~~~~~l~~~~~ 93 (321)
...+.|||||.-|++-+.|..+.+|.+-........+. . + ...+. .-...|...+|- |+..++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 34578999999999999999999998754222111000 0 0 00111 012345665553 67789999999
Q ss_pred CCcEEEEecCCcceeeeeec--Ccc---cEEEEEECCCCCEEEEeeCCCcEEEEec-CCCEEEE---EE----eCCCCCe
Q 020798 94 DKTIRLWDVPTATCLKTLIG--HTN---YVFCVNFNPQSNMIVSGAFDETVRIWDV-KTGKCLK---VL----PAHSDPV 160 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~l~~~~~dg~i~~wd~-~~~~~~~---~~----~~~~~~v 160 (321)
+.-|.+||.-+++...++.+ |.. ...+++|+|||.+|++| ....|+++|+ +.|+... ++ .+..+.+
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~gii 210 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII 210 (406)
T ss_pred cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhccccccccee
Confidence 99999999999886555443 322 35689999999999875 5689999998 5554221 11 1224668
Q ss_pred eEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-CCeEEEEeCCCC-cEEEE
Q 020798 161 TAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-DNTLRLWNYSTG-KILKT 237 (321)
Q Consensus 161 ~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d~~i~i~d~~~~-~~~~~ 237 (321)
.+++|+|... .++.+++..++-++.-....+... ...+...|+.+.|.++|+.|++|.. |..|..||++.. .++-.
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~l-lggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~ 289 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQL-LGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYA 289 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCceee-ecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhh
Confidence 8999999655 788899988888887665554444 4577888999999999999999874 778999999864 34555
Q ss_pred EeccCC-ceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc-ceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 238 YTGHTN-SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS-RKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
+..|.. ....|-+. ..+++++|++|+.||.|++||++. +..+..+..|...++.++++|.=.++|+++
T Consensus 290 L~rhv~~TNQRI~FD-ld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatss 359 (406)
T KOG2919|consen 290 LERHVGDTNQRILFD-LDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSS 359 (406)
T ss_pred hhhhccCccceEEEe-cCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeecc
Confidence 555554 33333332 246899999999999999999988 565777778899999999999988999886
No 137
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=6.2e-27 Score=196.86 Aligned_cols=239 Identities=26% Similarity=0.515 Sum_probs=206.2
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
+....|...|.++..-..++.+++|+.|..+.+|.+.. +..+..+.+|+.+|.++.|+++..+|++|+.+|+
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~k--------p~~i~S~~~hespIeSl~f~~~E~Llaagsasgt 93 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGK--------PNAITSLTGHESPIESLTFDTSERLLAAGSASGT 93 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccC--------CchhheeeccCCcceeeecCcchhhhcccccCCc
Confidence 45567999999999877889999999999999996643 2344568999999999999999999999999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS 176 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 176 (321)
|++||++..+.++.+.+|...+..+.|+|-+.++++++.|+.+++||++...+...+..|...+..++|+|+|++++.++
T Consensus 94 iK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ 173 (825)
T KOG0267|consen 94 IKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGG 173 (825)
T ss_pred eeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccC
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC
Q 020798 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 177 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
.|.++++||+..++....+. .+...+..+.|+|..-+++.|+.|+++++||+++-+.+.........+ .+..+.++
T Consensus 174 ed~tvki~d~~agk~~~ef~-~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v---~~~~fn~~ 249 (825)
T KOG0267|consen 174 EDNTVKIWDLTAGKLSKEFK-SHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGV---RSLAFNPD 249 (825)
T ss_pred Ccceeeeecccccccccccc-cccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCc---eeeeecCC
Confidence 99999999999888776653 355667888899999899999999999999999877777665543333 33444578
Q ss_pred CeEEEEeCCCC
Q 020798 257 GKYIVSGSEDS 267 (321)
Q Consensus 257 ~~~l~~~~~dg 267 (321)
+..+++|.+..
T Consensus 250 ~~~~~~G~q~s 260 (825)
T KOG0267|consen 250 GKIVLSGEQIS 260 (825)
T ss_pred ceeeecCchhh
Confidence 88888876553
No 138
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.94 E-value=2.6e-23 Score=168.68 Aligned_cols=299 Identities=19% Similarity=0.319 Sum_probs=219.8
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCC-CC--Cc------------------------
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDST-PP--SP------------------------ 65 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~-~~--~~------------------------ 65 (321)
+++.+....|.++|.+++.-.+|.+|- |+.|+.|..||-.-....+.. |. .+
T Consensus 277 ~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt 355 (626)
T KOG2106|consen 277 NRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGT 355 (626)
T ss_pred ceEEeEeeecCCceEEEEEecCccEee-cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEee
Confidence 445555559999999999999998665 999999999983211100000 00 00
Q ss_pred -----ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEE
Q 020798 66 -----LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140 (321)
Q Consensus 66 -----~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 140 (321)
.....+|.+....++.+|+.+.+++++.|+.+++|+ ..+++.+.. -..++.|+.|+|.| .++.|...|...
T Consensus 356 ~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~ 431 (626)
T KOG2106|consen 356 LENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWF 431 (626)
T ss_pred ecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcc-eEEEeeccceEE
Confidence 112356888889999999999999999999999999 444333322 34667899999999 999999999999
Q ss_pred EEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC-CceeeeeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST-GHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 141 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
+.|.++...+..-.. ..+++.++|+|+|.+|+.|+.|+.|++|.+.. +.........+..++..+.|++|++++.+-+
T Consensus 432 V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S 510 (626)
T KOG2106|consen 432 VLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNS 510 (626)
T ss_pred EEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEecc
Confidence 999988665555444 88999999999999999999999999998853 4444444444558899999999999999999
Q ss_pred cCCeEEEEeCCCCcEEEEEe---ccCCc------------eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc---eEEE
Q 020798 220 LDNTLRLWNYSTGKILKTYT---GHTNS------------KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR---KVVQ 281 (321)
Q Consensus 220 ~d~~i~i~d~~~~~~~~~~~---~~~~~------------~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~ 281 (321)
.|-.|..|.....+.+...+ -.+.. ..-+..+........+|+|...|.|++|...-. ...+
T Consensus 511 ~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~h 590 (626)
T KOG2106|consen 511 GDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSH 590 (626)
T ss_pred CceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccce
Confidence 99999999543322222211 00000 000111122245678999999999999997543 3456
Q ss_pred EecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 282 KLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 282 ~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
++.+|.+-|.+++|..+..+|++.+ .|..|..|+++
T Consensus 591 e~~ghs~~vt~V~Fl~~d~~li~tg--~D~Si~qW~lv 626 (626)
T KOG2106|consen 591 EYGGHSSHVTNVAFLCKDSHLISTG--KDTSIMQWRLV 626 (626)
T ss_pred eeccccceeEEEEEeeCCceEEecC--CCceEEEEEeC
Confidence 7889999999999999888888877 45789999863
No 139
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=2.5e-24 Score=185.73 Aligned_cols=244 Identities=21% Similarity=0.392 Sum_probs=196.3
Q ss_pred ccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc-ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE
Q 020798 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA-TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK 148 (321)
Q Consensus 70 ~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 148 (321)
..|..+.+.++|.|+|++|++++.||.|++|+.... +....+..+...+.+++.. .+.|++|+.+++|.+|.+.+++
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~ 87 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGE 87 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCC
Confidence 368899999999999999999999999999987655 3333343377778877765 4589999999999999998876
Q ss_pred EEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
.-..+....-++..++|+.+|++++.|+.|-.|++-+.........+ ..+..+|.++.|+|.+++|++.+.||.|++||
T Consensus 88 ~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~l-rgh~apVl~l~~~p~~~fLAvss~dG~v~iw~ 166 (933)
T KOG1274|consen 88 EDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVL-RGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWD 166 (933)
T ss_pred ccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheee-cccCCceeeeeEcCCCCEEEEEecCceEEEEE
Confidence 55455555678999999999999999999999999998766544443 46778899999999999999999999999999
Q ss_pred CCCCcEEEEEeccC------CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC--CCCCeEEEEecCCCc
Q 020798 229 YSTGKILKTYTGHT------NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG--HTDPVISVASHPTEN 300 (321)
Q Consensus 229 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~ 300 (321)
+.++.+...+.+-. ....+....| .|++..++....|+.|.+|+.........+.. +...+..++|+|.|.
T Consensus 167 ~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW-~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~ 245 (933)
T KOG1274|consen 167 LQDGILSKTLTGVDKDNEFILSRICTRLAW-HPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGK 245 (933)
T ss_pred cccchhhhhcccCCccccccccceeeeeee-cCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCc
Confidence 99987766664321 1222333344 46666777788899999999998887777654 444589999999999
Q ss_pred eEEEEeecCCccEEEcccc
Q 020798 301 IIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~ 319 (321)
|||+++.| |.|.|||.+
T Consensus 246 YiAAs~~~--g~I~vWnv~ 262 (933)
T KOG1274|consen 246 YIAASTLD--GQILVWNVD 262 (933)
T ss_pred EEeeeccC--CcEEEEecc
Confidence 99999865 789999987
No 140
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.94 E-value=9.7e-25 Score=176.64 Aligned_cols=265 Identities=17% Similarity=0.265 Sum_probs=206.7
Q ss_pred cEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC
Q 020798 25 AISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP 103 (321)
Q Consensus 25 ~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 103 (321)
++.++.|+.... .+++.+.|..+++|...+.. .....+....+. .-.|++......++++|+..+.|+|||++
T Consensus 36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~----~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~ 109 (673)
T KOG4378|consen 36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKT----PEVPRVRKLTGD--NAFCVACASQSLYEISGGQSGCVKIWDLR 109 (673)
T ss_pred cceeeeccccceEEEeecCCceeEEEecccCCC----Cccceeeccccc--hHHHHhhhhcceeeeccCcCceeeehhhH
Confidence 489999998774 34666778899998654321 111112222332 23445555555899999999999999999
Q ss_pred CcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC-CCCeeEEEEccCCCE-EEEEeCCCeE
Q 020798 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH-SDPVTAVDFNRDGTM-IVTSSYDGLC 181 (321)
Q Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-l~~~~~dg~i 181 (321)
...+.+.+.+|...|+++.++....+|++++..|.|.+..+.++.....+... ...+.-+.|+|..+. |.+++.+|.|
T Consensus 110 ~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~V 189 (673)
T KOG4378|consen 110 AKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAV 189 (673)
T ss_pred HHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeE
Confidence 88788888999999999999999999999999999999999988776666544 345668999998774 5678999999
Q ss_pred EEEeCCCCceeeeeccCCCCCeEEEEEccCC-CEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEE
Q 020798 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNG-KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260 (321)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (321)
.+||.....+...+...|..+...++|+|.. .+|++.+.|..|.+||.+..+....+.-.. + ++...+.++|.+|
T Consensus 190 tlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~-P---lstvaf~~~G~~L 265 (673)
T KOG4378|consen 190 TLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSH-P---LSTVAFSECGTYL 265 (673)
T ss_pred EEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecC-C---cceeeecCCceEE
Confidence 9999987777777777788888899999954 556778999999999999777666654322 2 3344456899999
Q ss_pred EEeCCCCeEEEEEcccc-eEEEEecCCCCCeEEEEecCCC
Q 020798 261 VSGSEDSCVYLWELQSR-KVVQKLEGHTDPVISVASHPTE 299 (321)
Q Consensus 261 ~~~~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~p~~ 299 (321)
++|+..|.|..||++.. .++..+..|...|++++|-|..
T Consensus 266 ~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 266 CAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred EeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 99999999999999875 4678888999999999998764
No 141
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.94 E-value=2e-24 Score=181.05 Aligned_cols=299 Identities=19% Similarity=0.333 Sum_probs=219.9
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
......||.++|..++|+|.|++|++.|.|.+-+++....... ....+.+.+.|.-.+.|++|-+..-.+++|...
T Consensus 353 ~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~----~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdE 428 (764)
T KOG1063|consen 353 QEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQ----EWHEIARPQIHGYDLTCLSFVNEDLQFVSGADE 428 (764)
T ss_pred eccccccccccceeeeecCCCCEEEEeccccceeeeccccccc----ceeeecccccccccceeeehccCCceeeecccc
Confidence 3344679999999999999999999999999999986552211 123344556688889999999865678888888
Q ss_pred CcEEEEecCC-------------------------------------------cc-------------------------
Q 020798 95 KTIRLWDVPT-------------------------------------------AT------------------------- 106 (321)
Q Consensus 95 ~~i~iwd~~~-------------------------------------------~~------------------------- 106 (321)
..+|+|+.+. +.
T Consensus 429 KVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~Edq 508 (764)
T KOG1063|consen 429 KVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQ 508 (764)
T ss_pred eeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHH
Confidence 8889987521 00
Q ss_pred --------eeeeeecCcccEEEEEECCCCCEEEEeeCCC-----cEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEE
Q 020798 107 --------CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE-----TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 107 --------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
.++.+.||...|++++.+|+++++++++... .|++|+..+-...+.++.|.-.|+.++|+||+++|+
T Consensus 509 Lq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LL 588 (764)
T KOG1063|consen 509 LQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLL 588 (764)
T ss_pred HHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEE
Confidence 0112458999999999999999999987643 589999888777788999999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCce---eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC--cEEEEE--eccCCcee
Q 020798 174 TSSYDGLCRIWDASTGHC---MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG--KILKTY--TGHTNSKY 246 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~--~~~~~~--~~~~~~~~ 246 (321)
+.+.|.++.+|....... .......|...|..+.|+|++.++++++.|.++++|...+. +.+..+ ..+...+.
T Consensus 589 svsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVT 668 (764)
T KOG1063|consen 589 SVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVT 668 (764)
T ss_pred EeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCcee
Confidence 999999999998643211 11123456667888999999999999999999999998776 333332 12233333
Q ss_pred EEEeEE--EecCCeEEEEeCCCCeEEEEEcccc---------eEEEE---ecCCCCCeEEEEecCC----------CceE
Q 020798 247 CISSTF--SVTNGKYIVSGSEDSCVYLWELQSR---------KVVQK---LEGHTDPVISVASHPT----------ENII 302 (321)
Q Consensus 247 ~~~~~~--~~~~~~~l~~~~~dg~i~vwd~~~~---------~~~~~---~~~h~~~v~~~~~~p~----------~~~l 302 (321)
.+.... ....+..++.|-..|.|.+|..... ....+ ..+|...|+.+.|.|. ...|
T Consensus 669 Av~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~~~~~~~~~~~~l~l 748 (764)
T KOG1063|consen 669 AVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPTCSDDWVEDKEWLNL 748 (764)
T ss_pred eEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEeccccccccccccceeEE
Confidence 333322 1223447899999999999986411 11111 2346778999999976 2456
Q ss_pred EEEeecCCccEEEcccc
Q 020798 303 ASGALDNDRTVKIWTQE 319 (321)
Q Consensus 303 ~s~~~d~~~~i~iw~~~ 319 (321)
++|+.| ..++|++..
T Consensus 749 a~~g~D--~~vri~nv~ 763 (764)
T KOG1063|consen 749 AVGGDD--ESVRIFNVD 763 (764)
T ss_pred eeeccc--ceeEEeecc
Confidence 888855 579998865
No 142
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.94 E-value=8.7e-23 Score=165.65 Aligned_cols=278 Identities=17% Similarity=0.287 Sum_probs=208.0
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccc-cccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGH-EQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
.++.|...+|+|.+.-|+.....+.+.+|++..... .+....++++ +.-|.|+.|.++|. +++|..+|.|.||
T Consensus 199 sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l-----~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw 272 (626)
T KOG2106|consen 199 SNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSL-----VKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIW 272 (626)
T ss_pred ccceEEEEEeccCCCcEEEEeCCceEEEEEccCCce-----EEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEE
Confidence 456788899999776554444578999998764321 1112223322 25689999999997 6789999999999
Q ss_pred ecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE------------E-------------------
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK------------C------------------- 149 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~------------~------------------- 149 (321)
+..+.+..+...+|.+.|.+++...+|.. ++|+.|..|..||-.=.+ .
T Consensus 273 ~~~~~~~~k~~~aH~ggv~~L~~lr~Gtl-lSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~i 351 (626)
T KOG2106|consen 273 SKGTNRISKQVHAHDGGVFSLCMLRDGTL-LSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFI 351 (626)
T ss_pred eCCCceEEeEeeecCCceEEEEEecCccE-eecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceE
Confidence 99888877777799999999999998864 559999999999821000 0
Q ss_pred ---------EEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec
Q 020798 150 ---------LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL 220 (321)
Q Consensus 150 ---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 220 (321)
......|....+.++.+|+.+.+++++.|+.+++|+ ..+..-.. ....+..++.|+|.| .+++|..
T Consensus 352 L~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~--~~~d~~~~~~fhpsg-~va~Gt~ 426 (626)
T KOG2106|consen 352 LQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTK--IIEDPAECADFHPSG-VVAVGTA 426 (626)
T ss_pred EEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEE--EecCceeEeeccCcc-eEEEeec
Confidence 011234667788899999999999999999999999 33332222 224567789999999 8999999
Q ss_pred CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc-eEEEEe-cCCCCCeEEEEecCC
Q 020798 221 DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR-KVVQKL-EGHTDPVISVASHPT 298 (321)
Q Consensus 221 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~-~~h~~~v~~~~~~p~ 298 (321)
.|...+.|..+...+..-.. ..+ ++...+.++|.+||.|+.|+.|++|.+... +...+. +.|.++|+.+.|++|
T Consensus 427 ~G~w~V~d~e~~~lv~~~~d-~~~---ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~D 502 (626)
T KOG2106|consen 427 TGRWFVLDTETQDLVTIHTD-NEQ---LSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSD 502 (626)
T ss_pred cceEEEEecccceeEEEEec-CCc---eEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCC
Confidence 99999999998766665544 333 445556689999999999999999998654 333333 224489999999999
Q ss_pred CceEEEEeecCCccEEEcc
Q 020798 299 ENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 299 ~~~l~s~~~d~~~~i~iw~ 317 (321)
+++|.+-+.| -.|..|.
T Consensus 503 s~~~~~~S~d--~eiLyW~ 519 (626)
T KOG2106|consen 503 SQFLVSNSGD--YEILYWK 519 (626)
T ss_pred CceEEeccCc--eEEEEEc
Confidence 9999998854 5688883
No 143
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.94 E-value=1.5e-24 Score=179.13 Aligned_cols=287 Identities=19% Similarity=0.291 Sum_probs=212.3
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC--EEEEE
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR--FLVSA 91 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~--~l~~~ 91 (321)
.+...+.||.+.|.++...|.|.+||+|+.||++++|.+.+. ..+..+. -...|.+++|+|.++ .||++
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~Tg--------Rcvr~~~-~d~~I~~vaw~P~~~~~vLAvA 461 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATG--------RCVRTVQ-FDSEIRSVAWNPLSDLCVLAVA 461 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecc--------eEEEEEe-ecceeEEEEecCCCCceeEEEE
Confidence 345567899999999999999999999999999999977542 2333332 245799999999775 34443
Q ss_pred eCCCcEEEEec---------------------------------CCcc----eeeeeecCcccEEEEEECCCCCEEEEee
Q 020798 92 SDDKTIRLWDV---------------------------------PTAT----CLKTLIGHTNYVFCVNFNPQSNMIVSGA 134 (321)
Q Consensus 92 ~~d~~i~iwd~---------------------------------~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 134 (321)
-. ..+.|-+. .... -+.....|...|..+.|+..|.+|++..
T Consensus 462 ~~-~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~ 540 (733)
T KOG0650|consen 462 VG-ECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVM 540 (733)
T ss_pred ec-CceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEec
Confidence 32 22333332 1100 0123446788899999999999999875
Q ss_pred CC---CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC
Q 020798 135 FD---ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN 211 (321)
Q Consensus 135 ~d---g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (321)
.+ ..|.++++........+....+.+..+.|+|...+|++++.. .|++||+..+..++.+... ...+..++++|.
T Consensus 541 ~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg-~kwiS~msihp~ 618 (733)
T KOG0650|consen 541 PDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTG-SKWISSMSIHPN 618 (733)
T ss_pred cCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcC-CeeeeeeeecCC
Confidence 43 468888987766555565566789999999999888888764 6899999887766665543 345888999999
Q ss_pred CCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc-------cc--eEEE
Q 020798 212 GKFILVGTLDNTLRLWNYSTG-KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ-------SR--KVVQ 281 (321)
Q Consensus 212 g~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-------~~--~~~~ 281 (321)
|..|++++.|+.+..||+.-. ++.+.+.-|......+ .+...-.++++|+.||++.||.-. +. ..++
T Consensus 619 GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~V---a~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK 695 (733)
T KOG0650|consen 619 GDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSV---AFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLK 695 (733)
T ss_pred CCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhh---hhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeee
Confidence 999999999999999998744 4555665565543333 233556789999999999998531 11 3467
Q ss_pred EecCCCCC----eEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 282 KLEGHTDP----VISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 282 ~~~~h~~~----v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
.+.+|... |.++.|||...+|.+++ .||+|++|.
T Consensus 696 ~L~gH~~~~~~gVLd~~wHP~qpWLfsAG--Ad~tirlfT 733 (733)
T KOG0650|consen 696 RLRGHEKTNDLGVLDTIWHPRQPWLFSAG--ADGTIRLFT 733 (733)
T ss_pred eccCceeecccceEeecccCCCceEEecC--CCceEEeeC
Confidence 88899765 99999999999999998 458999995
No 144
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=1.8e-23 Score=159.74 Aligned_cols=248 Identities=22% Similarity=0.398 Sum_probs=182.8
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--CCCEEEEEeCCCcE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--DSRFLVSASDDKTI 97 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--~~~~l~~~~~d~~i 97 (321)
.+|..-|.++.|.+-|+.+|+|+.|+.++|||... ...+.......+.|.+.|..+.|.+ -|+.+|+++.|+++
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~----~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv 85 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTS----DSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTV 85 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccC----CCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCce
Confidence 68999999999999999999999999999998643 2233344556788999999999975 48999999999999
Q ss_pred EEEecCCc---------ceeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCCEEE------EEEe------
Q 020798 98 RLWDVPTA---------TCLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTGKCL------KVLP------ 154 (321)
Q Consensus 98 ~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~------~~~~------ 154 (321)
.||.-... .....+......|..+.|.|. |-.+++++.||.+|+|+.-..-.. ..++
T Consensus 86 ~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp 165 (361)
T KOG2445|consen 86 SIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPP 165 (361)
T ss_pred eeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCc
Confidence 99974211 112344556678999999985 678999999999999986433211 1222
Q ss_pred -CCCCCeeEEEEccC---CCEEEEEeCC-----CeEEEEeCCCCc----eeeeeccCCCCCeEEEEEccC----CCEEEE
Q 020798 155 -AHSDPVTAVDFNRD---GTMIVTSSYD-----GLCRIWDASTGH----CMKTLIDDENPPVSFVKFSPN----GKFILV 217 (321)
Q Consensus 155 -~~~~~v~~~~~~~~---~~~l~~~~~d-----g~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~----g~~l~~ 217 (321)
.+..+..++.|+|. ...|++|+.+ +.+.+|....+. .+.++ ..+..+|..++|.|+ -..|++
T Consensus 166 ~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L-~d~~dpI~di~wAPn~Gr~y~~lAv 244 (361)
T KOG2445|consen 166 GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAEL-PDHTDPIRDISWAPNIGRSYHLLAV 244 (361)
T ss_pred ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhc-CCCCCcceeeeeccccCCceeeEEE
Confidence 35567889999975 3467777665 367788654322 12222 366778999999995 246889
Q ss_pred EecCCeEEEEeCCCC--------------------cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 218 GTLDNTLRLWNYSTG--------------------KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
++.|| |+||.++.. +.+..+..|...++.+... ..|..|++.+.||+||+|...-
T Consensus 245 A~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wN---mtGtiLsStGdDG~VRLWkany 319 (361)
T KOG2445|consen 245 ATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWN---MTGTILSSTGDDGCVRLWKANY 319 (361)
T ss_pred eecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEe---eeeeEEeecCCCceeeehhhhh
Confidence 99999 999998631 2344556677666655432 4689999999999999998643
No 145
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=2.5e-24 Score=164.98 Aligned_cols=237 Identities=16% Similarity=0.286 Sum_probs=176.5
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA 155 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 155 (321)
-.++.|++.|.+||.|+.||.|.|||+.+....+.+.+|..+|.+++|+++|++|++++.|..|.+||+..|.+.+.+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir- 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR- 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence 6789999999999999999999999999998888889999999999999999999999999999999999999888775
Q ss_pred CCCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeecc-C----CCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 156 HSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLID-D----ENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 156 ~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~-~----~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
...+|+.+.|+|... .++++-.+..-.+-++..+. ...+. . .+.......|++.|+++++|...|.+.++|.
T Consensus 105 f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~--h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a 182 (405)
T KOG1273|consen 105 FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK--HSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDA 182 (405)
T ss_pred ccCccceeeeccccCCeEEEEEecCCcEEEEecCCc--eeeccCCCccccccccccccccCCCCEEEEecCcceEEEEec
Confidence 467999999999654 33333333334444444321 11111 1 1112233458999999999999999999999
Q ss_pred CCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc-------e--EEEEecCC--CCCeEEEEecCC
Q 020798 230 STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR-------K--VVQKLEGH--TDPVISVASHPT 298 (321)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-------~--~~~~~~~h--~~~v~~~~~~p~ 298 (321)
.+.+.+..+.... ...+.....+..|++|+..++|+.||.|+++.- + ..+++... .-+=.++.|+.+
T Consensus 183 ~t~e~vas~rits--~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~d 260 (405)
T KOG1273|consen 183 ETLECVASFRITS--VQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGD 260 (405)
T ss_pred chheeeeeeeech--heeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCC
Confidence 9998888876543 122333334467999999999999999998631 1 11122111 112357889999
Q ss_pred CceEEEEeecCCccEEEccc
Q 020798 299 ENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 299 ~~~l~s~~~d~~~~i~iw~~ 318 (321)
|.+++.|+. ..-.++||-.
T Consensus 261 geYv~a~s~-~aHaLYIWE~ 279 (405)
T KOG1273|consen 261 GEYVCAGSA-RAHALYIWEK 279 (405)
T ss_pred ccEEEeccc-cceeEEEEec
Confidence 999998874 3457888864
No 146
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=3.3e-24 Score=171.95 Aligned_cols=239 Identities=18% Similarity=0.296 Sum_probs=194.4
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCc--ceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEE
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA--TCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKC 149 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~ 149 (321)
.++|+++.|+|....|++++.|+.++||.++.. ..+.++.-...+|.+.+|.|+|. .+++++....++.||+.+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 468999999999999999999999999988654 34555555677899999999998 889999999999999988764
Q ss_pred EEEE--eCCC-CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEE
Q 020798 150 LKVL--PAHS-DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRL 226 (321)
Q Consensus 150 ~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i 226 (321)
.+.- .++. ..+.....++++++++..+..|.|.+....+++.+..+. ....+..+.|+.+++.|++++.+|.|.+
T Consensus 293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K--ieG~v~~~~fsSdsk~l~~~~~~GeV~v 370 (514)
T KOG2055|consen 293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK--IEGVVSDFTFSSDSKELLASGGTGEVYV 370 (514)
T ss_pred ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee--eccEEeeEEEecCCcEEEEEcCCceEEE
Confidence 4322 2222 346678889999999999999999999888877665553 3456888999999999999999999999
Q ss_pred EeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc------ceEEEEecCCCCCeEEEEecCCCc
Q 020798 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS------RKVVQKLEGHTDPVISVASHPTEN 300 (321)
Q Consensus 227 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~------~~~~~~~~~h~~~v~~~~~~p~~~ 300 (321)
||++....++.+.... .+.. .......++.+||+|+..|.|.|||..+ +++++.+......|+++.|+|+..
T Consensus 371 ~nl~~~~~~~rf~D~G-~v~g-ts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~q 448 (514)
T KOG2055|consen 371 WNLRQNSCLHRFVDDG-SVHG-TSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQ 448 (514)
T ss_pred EecCCcceEEEEeecC-ccce-eeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchh
Confidence 9999999998886532 2222 2333457899999999999999999643 466777777788999999999999
Q ss_pred eEEEEeecCCccEEE
Q 020798 301 IIASGALDNDRTVKI 315 (321)
Q Consensus 301 ~l~s~~~d~~~~i~i 315 (321)
+||-+|.-.+..+++
T Consensus 449 iLAiaS~~~knalrL 463 (514)
T KOG2055|consen 449 ILAIASRVKKNALRL 463 (514)
T ss_pred hhhhhhhccccceEE
Confidence 999998766667766
No 147
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=2.3e-24 Score=172.00 Aligned_cols=243 Identities=19% Similarity=0.304 Sum_probs=175.9
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCC--C-----------CcccccccccccEEEEEECCC-CCEEEEEeCCCcEEE
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTP--P-----------SPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRL 99 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~--~-----------~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~i 99 (321)
.|+|+|.|+.|..|.|||+.-.......- . ..-..-.+|+..|..++|+.. .+.||+|+.|.+|++
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 36899999999999999986432111000 0 000112368888999999876 457899999999999
Q ss_pred EecCCcceeeeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC-EEEEEeC
Q 020798 100 WDVPTATCLKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT-MIVTSSY 177 (321)
Q Consensus 100 wd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 177 (321)
||+.++++..++..|...|.++.|+|. ...|++|+.|+++.+.|.+........-...+.|..++|.|... .++++..
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~td 350 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTD 350 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecC
Confidence 999999999999999999999999996 56799999999999999985332222222356789999999765 5677889
Q ss_pred CCeEEEEeCCCC-ceeeeeccCCCCCeEEEEEccCC-CEEEEEecCCeEEEEeCCCCcE--EEEEeccCCceeEEEeEEE
Q 020798 178 DGLCRIWDASTG-HCMKTLIDDENPPVSFVKFSPNG-KFILVGTLDNTLRLWNYSTGKI--LKTYTGHTNSKYCISSTFS 253 (321)
Q Consensus 178 dg~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~ 253 (321)
||+++-+|+|+. +++.++ ..|..+|..+.+++.- .++++++.|+.+++|++..... +.......+...| +.+.
T Consensus 351 dG~v~~~D~R~~~~~vwt~-~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c--~~~~ 427 (463)
T KOG0270|consen 351 DGTVYYFDIRNPGKPVWTL-KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHC--FALD 427 (463)
T ss_pred CceEEeeecCCCCCceeEE-EeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceee--cccC
Confidence 999999999976 555444 4667789999988754 4577889999999999864332 2211111111111 1122
Q ss_pred ecCCeEEEEeCCCCeEEEEEcccceE
Q 020798 254 VTNGKYIVSGSEDSCVYLWELQSRKV 279 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (321)
+.....++.|+..+.++|||+.+...
T Consensus 428 ~~~a~~la~GG~k~~~~vwd~~~~~~ 453 (463)
T KOG0270|consen 428 PDVAFTLAFGGEKAVLRVWDIFTNSP 453 (463)
T ss_pred CCcceEEEecCccceEEEeecccChh
Confidence 33456788999999999999977644
No 148
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.93 E-value=6.6e-24 Score=166.23 Aligned_cols=218 Identities=25% Similarity=0.414 Sum_probs=172.8
Q ss_pred cceeeeeccCCcccEEEEEECCC--CCEEEEecCCceEEEeeccccCCCC--------CCCCCcccccccccccEEEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHD--GRLLASSSADKTLLTYSLSSISNSD--------STPPSPLQKFTGHEQGVSDLVF 81 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~--g~~l~~~~~d~~v~~~~~~~~~~~~--------~~~~~~~~~~~~h~~~i~~~~~ 81 (321)
..++....-.|.+.+..++-++- ..+.|+.+..|.|.+|++....... .....|+.++.+|...=+.++|
T Consensus 140 ~P~~~~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdW 219 (440)
T KOG0302|consen 140 KPQIEMKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDW 219 (440)
T ss_pred cccccccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeec
Confidence 34455556678888888887764 4678899999999999987643221 1334677888999999999999
Q ss_pred CCCC-CEEEEEeCCCcEEEEecCCccee---eeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCC---EEEEEE
Q 020798 82 SSDS-RFLVSASDDKTIRLWDVPTATCL---KTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTG---KCLKVL 153 (321)
Q Consensus 82 ~~~~-~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~---~~~~~~ 153 (321)
||-. -.|++|.--+.|++|...++... ..+.+|+..|-.++|+|.. +.|++|+.||.|++||++.+ .++.+
T Consensus 220 Sp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~- 298 (440)
T KOG0302|consen 220 SPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST- 298 (440)
T ss_pred ccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-
Confidence 9932 23777777788999998876532 3467899999999999964 67999999999999999987 34443
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCc---eeeeeccCCCCCeEEEEEccC-CCEEEEEecCCeEEEEeC
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH---CMKTLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~ 229 (321)
+.|.+.|..+.|+....+|++|+.||++++||++..+ ++.. +..|..+|+++.|+|. ...|++++.|.+|.+||+
T Consensus 299 kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~-fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDl 377 (440)
T KOG0302|consen 299 KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVAT-FKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDL 377 (440)
T ss_pred eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCccee-EEeccCCeeEEEeccccCceEEeccCCCcEEEEEe
Confidence 7899999999999988899999999999999998643 3333 3457788999999995 456778889999999998
Q ss_pred CC
Q 020798 230 ST 231 (321)
Q Consensus 230 ~~ 231 (321)
..
T Consensus 378 sv 379 (440)
T KOG0302|consen 378 SV 379 (440)
T ss_pred ec
Confidence 53
No 149
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.92 E-value=2.9e-23 Score=162.66 Aligned_cols=242 Identities=21% Similarity=0.408 Sum_probs=184.0
Q ss_pred ccccccEEEEEECCCCC--EEEEEeCCCcEEEEecCC----------------cceeeeeecCcccEEEEEECCC-CCEE
Q 020798 70 TGHEQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPT----------------ATCLKTLIGHTNYVFCVNFNPQ-SNMI 130 (321)
Q Consensus 70 ~~h~~~i~~~~~~~~~~--~l~~~~~d~~i~iwd~~~----------------~~~~~~~~~~~~~v~~~~~~~~-~~~l 130 (321)
..|.+.++.+.-++-++ +.++=+..|.|+||++.. .+++.++.+|...-+.++|+|- ...|
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence 46778888888877653 455557889999999742 2345677889999999999993 3458
Q ss_pred EEeeCCCcEEEEecCCCEEE---EEEeCCCCCeeEEEEccCC-CEEEEEeCCCeEEEEeCCCCc-eeeeeccCCCCCeEE
Q 020798 131 VSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDG-TMIVTSSYDGLCRIWDASTGH-CMKTLIDDENPPVSF 205 (321)
Q Consensus 131 ~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~~~~~~~ 205 (321)
++|..-+.|++|...++.-. ..+..|...|..+.|+|.. ..|++|+-||+|+|||+|.+. ........++..|+.
T Consensus 228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNV 307 (440)
T KOG0302|consen 228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNV 307 (440)
T ss_pred ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceee
Confidence 88888899999998876422 2355799999999999975 478999999999999999873 222223567788999
Q ss_pred EEEccCCCEEEEEecCCeEEEEeCCC---CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceE---
Q 020798 206 VKFSPNGKFILVGTLDNTLRLWNYST---GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV--- 279 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--- 279 (321)
+.|+....+|++|+.||+++|||++. ++++..++-|..+++++. |.+.+...|++++.|.+|.+||+.-..-
T Consensus 308 ISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsie--W~p~e~s~iaasg~D~QitiWDlsvE~D~ee 385 (440)
T KOG0302|consen 308 ISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIE--WHPHEDSVIAASGEDNQITIWDLSVEADEEE 385 (440)
T ss_pred EEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEE--eccccCceEEeccCCCcEEEEEeeccCChhh
Confidence 99999988999999999999999875 578899999998887764 4556778899999999999999843110
Q ss_pred --------E-----EEecCC--CCCeEEEEecCCC-ceEEEEeecCCccEEEc
Q 020798 280 --------V-----QKLEGH--TDPVISVASHPTE-NIIASGALDNDRTVKIW 316 (321)
Q Consensus 280 --------~-----~~~~~h--~~~v~~~~~~p~~-~~l~s~~~d~~~~i~iw 316 (321)
+ +-+--| ...|..+.||+.- .+|++.+.|+ +.||
T Consensus 386 ~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG---fnVf 435 (440)
T KOG0302|consen 386 IDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG---FNVF 435 (440)
T ss_pred hccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc---eeEE
Confidence 0 011123 3468899999874 4677766553 4454
No 150
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.92 E-value=8.3e-23 Score=157.45 Aligned_cols=297 Identities=24% Similarity=0.428 Sum_probs=209.7
Q ss_pred Ccceeeee-ccCCcccEEEEEECC-----CCCEEEEecCCceEEEeeccccCCCCCCCCCccccc--ccccccEEEEEEC
Q 020798 11 RPYTLTQT-LNGHLRAISSVKFSH-----DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKF--TGHEQGVSDLVFS 82 (321)
Q Consensus 11 ~~~~~~~~-~~~h~~~v~~~~~s~-----~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~--~~h~~~i~~~~~~ 82 (321)
++|..... .+.|..+|..++|++ +-..+|+.+ ...+.+|....-. ....++.+ ..|....+.++|+
T Consensus 25 ~~yk~t~~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d~-----~ir~lq~y~D~d~~Esfytcsw~ 98 (385)
T KOG1034|consen 25 RSYKYTNHLKEDHNKPIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGDG-----GIRLLQSYADEDHDESFYTCSWS 98 (385)
T ss_pred cceEeeeehhccCCCccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCcc-----ceeeeeeccCCCCCcceEEEEEE
Confidence 45665544 467889999999984 234566665 4566677654311 00111111 2366778888887
Q ss_pred CC----CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEE---e
Q 020798 83 SD----SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVL---P 154 (321)
Q Consensus 83 ~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~---~ 154 (321)
-+ ..++++|+.-|.|+|.|+.++++...+.+|...|..+.+.|+. +++++++.|..|++|++++..++..+ .
T Consensus 99 yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~e 178 (385)
T KOG1034|consen 99 YDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVE 178 (385)
T ss_pred ecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccc
Confidence 43 3588999999999999999999999999999999999999975 67899999999999999999998876 5
Q ss_pred CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec------cC---------------------CCCCeEEEE
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI------DD---------------------ENPPVSFVK 207 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~------~~---------------------~~~~~~~~~ 207 (321)
+|.+.|.++.|++++.++++++.|..+++|++...+....+. .. |...|.++.
T Consensus 179 gHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvr 258 (385)
T KOG1034|consen 179 GHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVR 258 (385)
T ss_pred cccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHH
Confidence 789999999999999999999999999999997432211110 00 001111111
Q ss_pred EccCCCEEEEEecCCeEEEEeCC-CCc-------------EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEE
Q 020798 208 FSPNGKFILVGTLDNTLRLWNYS-TGK-------------ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 208 ~~~~g~~l~~~~~d~~i~i~d~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd 273 (321)
| -|+++++-+-++.|..|... -.+ .+..+.-..-..+.+.+.+. +-++.||.|.+.|.|.+||
T Consensus 259 w--~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d-~~~~~la~gnq~g~v~vwd 335 (385)
T KOG1034|consen 259 W--FGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFD-PWQKMLALGNQSGKVYVWD 335 (385)
T ss_pred H--HhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeec-HHHHHHhhccCCCcEEEEE
Confidence 2 15678887888899999862 111 12222222233444444333 4578899999999999999
Q ss_pred cccceEE--EEecC--CCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 274 LQSRKVV--QKLEG--HTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 274 ~~~~~~~--~~~~~--h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
++..+.. .++.. -...|+..+|+-|+..|+... +|++|--||-
T Consensus 336 L~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vc--dd~~Vwrwdr 382 (385)
T KOG1034|consen 336 LDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVC--DDGTVWRWDR 382 (385)
T ss_pred CCCCCCccCceEEeccccceeeeeeecccCcEEEEEe--CCCcEEEEEe
Confidence 9876542 22221 135799999999999999887 4578887774
No 151
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.5e-23 Score=167.45 Aligned_cols=230 Identities=22% Similarity=0.399 Sum_probs=175.2
Q ss_pred CCCEEEEEeCCCcEEEEecCCccee---------------------eeeecCcccEEEEEECCC-CCEEEEeeCCCcEEE
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCL---------------------KTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRI 141 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~---------------------~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~ 141 (321)
.|+++|.|+.|..|.|||+.-...+ ....+|+..|..++|+.. .+.|++|+.|.+|++
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 3679999999999999998532110 012368888888888875 357999999999999
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-EEEEEe
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-FILVGT 219 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~ 219 (321)
||+.++++...+..|...|.+++|+|. ...|++|+.|+++.+.|.|......... .....|..++|+|... .+++++
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w-k~~g~VEkv~w~~~se~~f~~~t 349 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW-KFDGEVEKVAWDPHSENSFFVST 349 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceE-EeccceEEEEecCCCceeEEEec
Confidence 999999999999999999999999996 4578999999999999998533222111 2245688899999654 566778
Q ss_pred cCCeEEEEeCCCC-cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCC---CCCeEEEEe
Q 020798 220 LDNTLRLWNYSTG-KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH---TDPVISVAS 295 (321)
Q Consensus 220 ~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h---~~~v~~~~~ 295 (321)
.||.++-+|++.. +++.+++.|...+.+++.. .....++++++.|+.|++|++.....- ....| -+...|.++
T Consensus 350 ddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n--~~~p~~l~t~s~d~~Vklw~~~~~~~~-~v~~~~~~~~rl~c~~~ 426 (463)
T KOG0270|consen 350 DDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVN--IQTPGLLSTASTDKVVKLWKFDVDSPK-SVKEHSFKLGRLHCFAL 426 (463)
T ss_pred CCceEEeeecCCCCCceeEEEeccCCcceEEec--CCCCcceeeccccceEEEEeecCCCCc-ccccccccccceeeccc
Confidence 8999999999875 8999999999987776543 345668999999999999998643321 11122 234677788
Q ss_pred cCCCc-eEEEEeecCCccEEEcccc
Q 020798 296 HPTEN-IIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 296 ~p~~~-~l~s~~~d~~~~i~iw~~~ 319 (321)
.|+-. .+|.|+ ..+.+++||..
T Consensus 427 ~~~~a~~la~GG--~k~~~~vwd~~ 449 (463)
T KOG0270|consen 427 DPDVAFTLAFGG--EKAVLRVWDIF 449 (463)
T ss_pred CCCcceEEEecC--ccceEEEeecc
Confidence 88864 566666 34689999974
No 152
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.92 E-value=6.8e-23 Score=171.73 Aligned_cols=273 Identities=22% Similarity=0.407 Sum_probs=204.0
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
.|..++|.|||..|+.+. +..+.+||..+ ...++++++|++.|++++|+.||+.+++|+.|..|.+|+-.-
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~nd--------G~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl 84 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSD--------GTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL 84 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCC--------cccccccccccceEEEEEEccCCceeccCCCceeEEEecccc
Confidence 899999999999887765 45677887653 346788999999999999999999999999999999998532
Q ss_pred cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEE
Q 020798 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184 (321)
Q Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 184 (321)
...+ -..|++.|.|+.|+|-...|++|+-. ..-+|...... +... .....+.+++|..||.+++.|-.+|+|.+-
T Consensus 85 EG~L--kYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~-V~K~-kss~R~~~CsWtnDGqylalG~~nGTIsiR 159 (1081)
T KOG1538|consen 85 EGIL--KYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKS-VSKH-KSSSRIICCSWTNDGQYLALGMFNGTISIR 159 (1081)
T ss_pred ccee--eeccCCeeeEeecCchHHHhhhcchh-hccccChhhhh-HHhh-hhheeEEEeeecCCCcEEEEeccCceEEee
Confidence 2222 23599999999999999999998753 35678654332 2111 124568899999999999999999999987
Q ss_pred eCCCCceeeee-ccCCCCCeEEEEEccCC-----CEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe
Q 020798 185 DASTGHCMKTL-IDDENPPVSFVKFSPNG-----KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258 (321)
Q Consensus 185 d~~~~~~~~~~-~~~~~~~~~~~~~~~~g-----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (321)
+....+....- ..+.+.+|..++|+|.. ..+++.....++.+|.+. |+.+..-..-.-...|+.. .++|+
T Consensus 160 Nk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisY---f~NGE 235 (1081)
T KOG1538|consen 160 NKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISY---FTNGE 235 (1081)
T ss_pred cCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhhee---ccCCc
Confidence 65433222221 23456789999999963 457777888888888764 4433322111112234332 36899
Q ss_pred EEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 259 YIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+++.|+.|+.+.+|- +.+..+.++......|+.++.+|++.+++.|..| |+|-.|++
T Consensus 236 y~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqD--GTiACyNl 292 (1081)
T KOG1538|consen 236 YILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQD--GTIACYNL 292 (1081)
T ss_pred EEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEcc--Ceeehhhh
Confidence 999999999999997 4566666776677899999999999999999975 78988875
No 153
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=3.1e-24 Score=189.31 Aligned_cols=251 Identities=19% Similarity=0.368 Sum_probs=200.5
Q ss_pred ccEEEEEECCCCCE----EEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC-EEEEEeCCCcEE
Q 020798 24 RAISSVKFSHDGRL----LASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR-FLVSASDDKTIR 98 (321)
Q Consensus 24 ~~v~~~~~s~~g~~----l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~~~~~d~~i~ 98 (321)
..-+.++|.+.|.. ||.|.+||.|.+|+...+.. ......+..+..|++.|..+.|++.+. .||+|+.||.|.
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~--~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~ 142 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIA--NASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEIL 142 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhcc--CcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEE
Confidence 45678999988765 89999999999998876421 222345677889999999999999765 999999999999
Q ss_pred EEecCCcceeeee--ecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEeCCCC--CeeEEEEccCCC-EE
Q 020798 99 LWDVPTATCLKTL--IGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLPAHSD--PVTAVDFNRDGT-MI 172 (321)
Q Consensus 99 iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~--~v~~~~~~~~~~-~l 172 (321)
|||+.+.+..... ....+.|.+++|+..- ..|++++.+|.+.+||++..+.+..+..+.. .+..++|+|+.. .+
T Consensus 143 iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql 222 (1049)
T KOG0307|consen 143 IWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQL 222 (1049)
T ss_pred EeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceee
Confidence 9999875433222 2245679999998764 4678899999999999998877766655543 477999999864 56
Q ss_pred EEEeCCC---eEEEEeCCCCceeeeeccCCCCCeEEEEEccCC-CEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEE
Q 020798 173 VTSSYDG---LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG-KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248 (321)
Q Consensus 173 ~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 248 (321)
++++.|. .|.+||+|......+.+..|...+..+.|++.+ .++++++.|+.|.+|+..+++.+..+.. ...++.
T Consensus 223 ~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~--~~nW~f 300 (1049)
T KOG0307|consen 223 LVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA--QGNWCF 300 (1049)
T ss_pred eeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC--CCccee
Confidence 6666544 699999997666556667788899999999976 7888999999999999999999988865 445677
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEcccce
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
...|++.+...+++++-||.|.||.+....
T Consensus 301 dv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 301 DVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eeeecCCCcchhhhheeccceeeeeeecCC
Confidence 778888788899999999999999987653
No 154
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=6.5e-24 Score=174.23 Aligned_cols=271 Identities=26% Similarity=0.387 Sum_probs=200.7
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
+.+.-++.-|...|..++|.|....|++++.|+.+++|.+............++.+|.+|.++|.|++++++++.+++|+
T Consensus 284 w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg 363 (577)
T KOG0642|consen 284 WNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGG 363 (577)
T ss_pred cceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeec
Confidence 44555677899999999999999999999999999999996544444455678899999999999999999999999999
Q ss_pred CCCcEEEEecCCc----------ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe--CCCCCe
Q 020798 93 DDKTIRLWDVPTA----------TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP--AHSDPV 160 (321)
Q Consensus 93 ~d~~i~iwd~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~v 160 (321)
.||+|+.|++... .....+.||.+.++.+++++...+|++|+.||+++.|+...... .++. .....-
T Consensus 364 ~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~P 442 (577)
T KOG0642|consen 364 IDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYP 442 (577)
T ss_pred cCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCc
Confidence 9999999976522 12345789999999999999999999999999999999866554 2222 112233
Q ss_pred eEEEEccCC-CEEEEEeCCCeEEEEeCCCCceeeeeccC------CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc
Q 020798 161 TAVDFNRDG-TMIVTSSYDGLCRIWDASTGHCMKTLIDD------ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233 (321)
Q Consensus 161 ~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~ 233 (321)
.++++.... .+.++...-+...+++......+..+... ....+..+.++|.+...+++..|+.|+++|..+++
T Consensus 443 lsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~ 522 (577)
T KOG0642|consen 443 LSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGK 522 (577)
T ss_pred ceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccc
Confidence 455554332 12222222233333333333322222111 11346778899999999999999999999999999
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~ 287 (321)
++.....|... ++.....++|.+|++++.|+.+++|.+....++.....|.
T Consensus 523 ~l~s~~a~~~s---vtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 523 ILHSMVAHKDS---VTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred cchheeeccce---ecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence 99888777654 3444556899999999999999999997766655554443
No 155
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.92 E-value=4.2e-22 Score=157.09 Aligned_cols=230 Identities=25% Similarity=0.423 Sum_probs=176.6
Q ss_pred ccccccccEEEEEECC-CCCEEEEEeCCCcEEEEecCCcc-------eeeeeecCcccEEEEEECCCC-CEEEEeeCCCc
Q 020798 68 KFTGHEQGVSDLVFSS-DSRFLVSASDDKTIRLWDVPTAT-------CLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDET 138 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~ 138 (321)
.+.+|++.|.+++|+| +...||+|+.|.+|.||.+..+. ++..+.+|...|..++|+|.. +.|++++.|.+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 4679999999999999 45688999999999999986642 356788999999999999964 67899999999
Q ss_pred EEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE
Q 020798 139 VRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218 (321)
Q Consensus 139 i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 218 (321)
|.+|++.+++.+..+. |.+.|.++.|+.+|.++++++.|..|++||.++++.+..-....+.....+.|-.+|..+.+|
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG 234 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG 234 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence 9999999999888877 999999999999999999999999999999999988776644444455667788889855554
Q ss_pred e---cCCeEEEEeCCCCcE-EEEEeccCCceeEEEeEEEecCCeE-EEEeCCCCeEEEEEcccceE-EEEecC--CCCCe
Q 020798 219 T---LDNTLRLWNYSTGKI-LKTYTGHTNSKYCISSTFSVTNGKY-IVSGSEDSCVYLWELQSRKV-VQKLEG--HTDPV 290 (321)
Q Consensus 219 ~---~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~-~~~~~~--h~~~v 290 (321)
. ++.++-+||..+.+. +......+. ..+...|+.+|... .++|-.|+.||.|++..... ++-+.. ...+.
T Consensus 235 fsr~seRq~aLwdp~nl~eP~~~~elDtS--nGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~epQ 312 (472)
T KOG0303|consen 235 FSRMSERQIALWDPNNLEEPIALQELDTS--NGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEPQ 312 (472)
T ss_pred cccccccceeccCcccccCcceeEEeccC--CceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccCCcc
Confidence 3 467899999765432 222211121 12444566555554 45788999999999977652 333332 24577
Q ss_pred EEEEecCCCc
Q 020798 291 ISVASHPTEN 300 (321)
Q Consensus 291 ~~~~~~p~~~ 300 (321)
+++.|-|..-
T Consensus 313 RG~g~mPKRG 322 (472)
T KOG0303|consen 313 RGMGFMPKRG 322 (472)
T ss_pred cccccccccc
Confidence 8888888743
No 156
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.91 E-value=8.7e-23 Score=170.17 Aligned_cols=127 Identities=20% Similarity=0.324 Sum_probs=105.0
Q ss_pred eeccCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 17 QTLNGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
..|.+|...|+.+.|+| +..+||+|+.|..+++|.+.+.....- ..+...+.+....+.++.|+|...-|+..+..|
T Consensus 73 ~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~L--Sape~~~g~~~~~vE~l~fHpTaDgil~s~a~g 150 (1012)
T KOG1445|consen 73 GILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKL--SAPEIDVGGGNVIVECLRFHPTADGILASGAHG 150 (1012)
T ss_pred ceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCccccc--CCcceeecCCceEEEEeecccCcCceEEeccCc
Confidence 45778999999999998 667899999999999998863221111 122223334455788999999877777778889
Q ss_pred cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 96 TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
+++|||+.+++.+..+.+|.+.|.+..|+.||..+++++.|..|++||.+
T Consensus 151 ~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPR 200 (1012)
T KOG1445|consen 151 SVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPR 200 (1012)
T ss_pred eEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCc
Confidence 99999999999999999999999999999999999999999999999975
No 157
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=6.4e-24 Score=187.40 Aligned_cols=285 Identities=22% Similarity=0.397 Sum_probs=209.4
Q ss_pred EEEECCCCC-EEEEecC----------CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCE----EEEEe
Q 020798 28 SVKFSHDGR-LLASSSA----------DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRF----LVSAS 92 (321)
Q Consensus 28 ~~~~s~~g~-~l~~~~~----------d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~----l~~~~ 92 (321)
..+|+|++. ++|+|.. +..+-+|.+...... ....+...+. -....+.++|.+.+.. |+.|.
T Consensus 11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~--~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~ 87 (1049)
T KOG0307|consen 11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDES--SDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGL 87 (1049)
T ss_pred eEEecCCCchhhHHHhhhhccccccccccccceeeecccCcc--cccccccccc-ccccceeeeecccCCCccceeeccc
Confidence 479999997 5665533 344445544322111 0011111221 2345788999988765 88999
Q ss_pred CCCcEEEEecCCc------ceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEE--eCCCCCeeEE
Q 020798 93 DDKTIRLWDVPTA------TCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVL--PAHSDPVTAV 163 (321)
Q Consensus 93 ~d~~i~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~~~v~~~ 163 (321)
.||.|.+||.... ..+.+...|.+.|..+.|++.. +.|++|+.+|.|.+||+.+-+..... ....+.|.++
T Consensus 88 edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~l 167 (1049)
T KOG0307|consen 88 EDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCL 167 (1049)
T ss_pred cCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEe
Confidence 9999999997652 2345567899999999999965 59999999999999999864433222 1234679999
Q ss_pred EEccC-CCEEEEEeCCCeEEEEeCCCCceeeeeccCCC-CCeEEEEEccCCC-EEEEEecCC---eEEEEeCCCC-cEEE
Q 020798 164 DFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN-PPVSFVKFSPNGK-FILVGTLDN---TLRLWNYSTG-KILK 236 (321)
Q Consensus 164 ~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~g~-~l~~~~~d~---~i~i~d~~~~-~~~~ 236 (321)
+|+.. ...|++++.+|.+.+||++..+.+-.+..... ..+..++|+|++. .+++++.|. .|.+||++.. .+++
T Consensus 168 sWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k 247 (1049)
T KOG0307|consen 168 SWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLK 247 (1049)
T ss_pred ccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchh
Confidence 99975 45688899999999999998765554432222 3467899999763 455555543 6999998754 4677
Q ss_pred EEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCc-eEEEEeecCCccEEE
Q 020798 237 TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN-IIASGALDNDRTVKI 315 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~~~d~~~~i~i 315 (321)
.+++|...+.++ .|+..|.++|++++.|+.|.+|+.++++.+..+..-.+.+..+.|+|... .++.++.| |.|.|
T Consensus 248 ~~~~H~~Gilsl--sWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfd--gkI~I 323 (1049)
T KOG0307|consen 248 ILEGHQRGILSL--SWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFD--GKISI 323 (1049)
T ss_pred hhcccccceeee--ccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheec--cceee
Confidence 888888776554 45567789999999999999999999999999988888999999999986 78888876 78999
Q ss_pred cccc
Q 020798 316 WTQE 319 (321)
Q Consensus 316 w~~~ 319 (321)
|.++
T Consensus 324 ~sl~ 327 (1049)
T KOG0307|consen 324 YSLQ 327 (1049)
T ss_pred eeee
Confidence 9875
No 158
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=4.8e-22 Score=152.81 Aligned_cols=245 Identities=20% Similarity=0.370 Sum_probs=172.5
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcce-----eeeeecCcccEEEEEECCCCCEE-EEeeCCCcE
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC-----LKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETV 139 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i 139 (321)
+..+++|.+.|++++|+.||++|++++.|+.|++|+++.... ++... .-+..+.+.|.||-+-+ +++-...++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nv-e~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNV-EYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccc-cCCCceEEEECCCcceEEEEEccCCEE
Confidence 456789999999999999999999999999999999876532 21111 11245678999997654 455566689
Q ss_pred EEEecCCCE---EE---------EEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEE
Q 020798 140 RIWDVKTGK---CL---------KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207 (321)
Q Consensus 140 ~~wd~~~~~---~~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 207 (321)
++|.+...+ .. ..-..|.-.+..+-...++.++.+++.|..|.+|+++ |+.+..+-... ......+
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq-~~n~~aa 235 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQ-SSNYDAA 235 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccc-cccccee
Confidence 999763221 10 0112345556666666777899999999999999999 66666653332 2345678
Q ss_pred EccCCCEEEEEecCCeEEEEeCC---CC-----cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc---
Q 020798 208 FSPNGKFILVGTLDNTLRLWNYS---TG-----KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS--- 276 (321)
Q Consensus 208 ~~~~g~~l~~~~~d~~i~i~d~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~--- 276 (321)
.+|+|+++++++..-.+++|.+- +| +.+..+.+|...+ ....+.++.+.+++.+.||+.++||..-
T Consensus 236 vSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV---~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~ 312 (420)
T KOG2096|consen 236 VSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAV---LAAAFSNSSTRAVTVSKDGKWRIWDTDVRYE 312 (420)
T ss_pred eCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhhe---eeeeeCCCcceeEEEecCCcEEEeeccceEe
Confidence 99999999999998899999852 22 2345677887654 3333457889999999999999999742
Q ss_pred ----ceEEEEe----cCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 277 ----RKVVQKL----EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 277 ----~~~~~~~----~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+.++.. ....+.-..++.+|.|..||..+ ...++++..|
T Consensus 313 ~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~---gs~l~~~~se 360 (420)
T KOG2096|consen 313 AGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF---GSDLKVFASE 360 (420)
T ss_pred cCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec---CCceEEEEcc
Confidence 2222222 11222334899999999999875 2458888765
No 159
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=1.1e-23 Score=172.85 Aligned_cols=288 Identities=19% Similarity=0.311 Sum_probs=199.0
Q ss_pred EEECCCCC--EEEEecCCceEEEe--eccccCCCCCCC------------CCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 29 VKFSHDGR--LLASSSADKTLLTY--SLSSISNSDSTP------------PSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 29 ~~~s~~g~--~l~~~~~d~~v~~~--~~~~~~~~~~~~------------~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
+++.|.+. ..++...+....+| ++.......... ..+..++..|.+.|+.+.|+|....|++++
T Consensus 234 i~~~~~~~k~~~~g~d~~l~~~l~~~tla~l~I~~~~dd~~~~k~a~~k~w~ik~tl~s~~d~ir~l~~~~sep~lit~s 313 (577)
T KOG0642|consen 234 ITNPPEGTKSISVGADEDLMSRLGLGTLAGLTIEDEFDDLSDLKKAFTKKWNIKFTLRSHDDCIRALAFHPSEPVLITAS 313 (577)
T ss_pred ccCCcccCCCccccCchHHHHhhcccchhcccccccccchhhhhhhhheecceeeeeecchhhhhhhhcCCCCCeEEEec
Confidence 45555442 45555566666677 443332211111 122335667899999999999999999999
Q ss_pred CCCcEEEEecCC--------cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC----------EEEEEEe
Q 020798 93 DDKTIRLWDVPT--------ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG----------KCLKVLP 154 (321)
Q Consensus 93 ~d~~i~iwd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~----------~~~~~~~ 154 (321)
.||.+++|++.. .+++.++.+|.++|.|+++.+++..+++|+.||+|+.|++... .....+.
T Consensus 314 ed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~ 393 (577)
T KOG0642|consen 314 EDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLL 393 (577)
T ss_pred cccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhcccee
Confidence 999999999932 2356788999999999999999999999999999999965311 1234567
Q ss_pred CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce-eeeeccCCCCCeEEEEEccCC-CEEEEEecCCeEEEEeCCCC
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC-MKTLIDDENPPVSFVKFSPNG-KFILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~~ 232 (321)
+|.+.++.+++++....|++++.||+++.|+...... .......+..+ ..+.+-... ...++...-+.-.++++...
T Consensus 394 Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~P-lsvd~~ss~~a~~~~s~~~~~~~~~~~ev~ 472 (577)
T KOG0642|consen 394 GHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYP-LSVDRTSSRPAHSLASFRFGYTSIDDMEVV 472 (577)
T ss_pred ccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCc-ceEeeccchhHhhhhhcccccccchhhhhh
Confidence 8999999999999988999999999999999865543 11111122222 233333222 11222222222233333333
Q ss_pred cEEEEEeccCCce----eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeec
Q 020798 233 KILKTYTGHTNSK----YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308 (321)
Q Consensus 233 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d 308 (321)
..+..+.....+. ..+....+.+++.+.+++-.|+.|+++|..++++++....|...++++++.|+|.+|++|+
T Consensus 473 s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s-- 550 (577)
T KOG0642|consen 473 SDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGS-- 550 (577)
T ss_pred hheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeec--
Confidence 3333332111110 1122334456788899999999999999999999999999999999999999999999998
Q ss_pred CCccEEEcccc
Q 020798 309 NDRTVKIWTQE 319 (321)
Q Consensus 309 ~~~~i~iw~~~ 319 (321)
.|+.|++|.++
T Consensus 551 ~d~sv~l~kld 561 (577)
T KOG0642|consen 551 HDGSVRLWKLD 561 (577)
T ss_pred CCceeehhhcc
Confidence 56899999985
No 160
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=3.2e-21 Score=143.06 Aligned_cols=270 Identities=17% Similarity=0.252 Sum_probs=187.7
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCC--CcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPP--SPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~--~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
..|.+-+++|.+++|+.|..+|.|.+..+.........++ .++-...+|+++|+.++|. ..+|++|+ ||.|+-|.
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~ 87 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWE 87 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEee
Confidence 5677789999999999999999999999887655443333 3444557899999999998 34666665 59999997
Q ss_pred cCCcce------eeee--e-----cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 102 VPTATC------LKTL--I-----GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 102 ~~~~~~------~~~~--~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
...... +... . ..-..|+++.+.|..+.++.++.|+.++-||+++|+....+.+|.+.+.++.-...
T Consensus 88 W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~ 167 (325)
T KOG0649|consen 88 WNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNA 167 (325)
T ss_pred ehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeeccc
Confidence 643211 0000 1 12245888999998888888889999999999999999999999999999988655
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCC-------eEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP-------VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
...+++|++||++|+||.++++++..+.....+. -...+..-+..++++|+ ...+.+|+++..+....+.-.
T Consensus 168 ~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGg-Gp~lslwhLrsse~t~vfpip 246 (325)
T KOG0649|consen 168 NGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGG-GPKLSLWHLRSSESTCVFPIP 246 (325)
T ss_pred CcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecC-CCceeEEeccCCCceEEEecc
Confidence 6678999999999999999998877653222111 11134444666887665 456999999998877766532
Q ss_pred CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEE
Q 020798 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIAS 304 (321)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 304 (321)
.. ..-+ .| ....++++++.+.|.-|.+. +.+-..+.......++..|+..--.+++
T Consensus 247 a~-v~~v--~F---~~d~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~~p~k~~s 302 (325)
T KOG0649|consen 247 AR-VHLV--DF---VDDCVLIGGEGNHVQSYTLN-GVLQANIPVESTACYSASWQTSPIKFIS 302 (325)
T ss_pred cc-eeEe--ee---ecceEEEeccccceeeeeec-cEEEEeccCCccceeeecccCCceEEEE
Confidence 21 1111 22 24567778888899999875 3333333333334455555544333333
No 161
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=2.2e-23 Score=168.35 Aligned_cols=296 Identities=26% Similarity=0.402 Sum_probs=229.4
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC--CCEEEEE
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD--SRFLVSA 91 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~--~~~l~~~ 91 (321)
.+...|.+|.+.|..+-|+..|..|++|+.|..+.+|++..... .+.-..+|...|..-.|-|. .+.++++
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~-------~l~f~SGH~~NvfQaKFiP~s~d~ti~~~ 205 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSP-------KLSFESGHCNNVFQAKFIPFSGDRTIVTS 205 (559)
T ss_pred hhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCc-------ccccccccccchhhhhccCCCCCcCceec
Confidence 34567889999999999999999999999999999998765321 22334578888888888874 4678999
Q ss_pred eCCCcEEEEecCCcce---eeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEe---CCCC---Cee
Q 020798 92 SDDKTIRLWDVPTATC---LKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLP---AHSD---PVT 161 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~---~~~~---~v~ 161 (321)
+.||++++=.+..... .+.+..|.+.|..++.-|+. ..|.+++.|+.+.-+|++.+.+...+. .+.. ...
T Consensus 206 s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~ 285 (559)
T KOG1334|consen 206 SRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLY 285 (559)
T ss_pred cccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeee
Confidence 9999999877643322 34566799999999999875 568999999999999998775443332 2222 356
Q ss_pred EEEEccCCC-EEEEEeCCCeEEEEeCCCCce-----------eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 162 AVDFNRDGT-MIVTSSYDGLCRIWDASTGHC-----------MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 162 ~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
+++..|... .+++++.|..+++||.+.... ...+.......|++++|+.++.-++++..|-.|++|.-
T Consensus 286 ~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~ 365 (559)
T KOG1334|consen 286 TIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNK 365 (559)
T ss_pred eEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEecc
Confidence 888888765 789999999999999864321 11222233346899999988878888888889999953
Q ss_pred C--CC----------cEEEE-EeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEec
Q 020798 230 S--TG----------KILKT-YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296 (321)
Q Consensus 230 ~--~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 296 (321)
. .+ ..++. |++|.+....-...|+.|...++++|+..|.|.||+-.+++.+..+++-..-|+||.=|
T Consensus 366 ~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpH 445 (559)
T KOG1334|consen 366 SMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPH 445 (559)
T ss_pred ccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCC
Confidence 2 22 23333 78887766555566777889999999999999999999999998888866689999999
Q ss_pred CCCceEEEEeecCCccEEEccc
Q 020798 297 PTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 297 p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
|.-..||+.|.|.| ||||..
T Consensus 446 P~~PvLAsSGid~D--VKIWTP 465 (559)
T KOG1334|consen 446 PHLPVLASSGIDHD--VKIWTP 465 (559)
T ss_pred CCCchhhccCCccc--eeeecC
Confidence 99999999999865 999987
No 162
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.91 E-value=6.5e-20 Score=158.26 Aligned_cols=291 Identities=36% Similarity=0.698 Sum_probs=220.2
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccccc-ccEEEEEE-CCCCC-EEEEEeC-
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHE-QGVSDLVF-SSDSR-FLVSASD- 93 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~-~~~~~-~l~~~~~- 93 (321)
.+.+|...+.++.|.+.+..++.++.|+.+.+|+..... .....+..+. ..+..+.+ ++++. .++..+.
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE-------KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSL 132 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc-------eeEEEEeccCCCceeeEEEECCCcceEEeccCCC
Confidence 456899999999999999999999999999999875422 1233344422 36677777 78877 5554444
Q ss_pred CCcEEEEecCC-cceeeeeecCcccEEEEEECCCCCEEEEeeC-CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC-
Q 020798 94 DKTIRLWDVPT-ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT- 170 (321)
Q Consensus 94 d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~- 170 (321)
|+.+.+|+... ......+..|...+..++++|++..+++++. ++.+++|++..+.....+..|...+..++|+|++.
T Consensus 133 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 212 (466)
T COG2319 133 DGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGL 212 (466)
T ss_pred CccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcce
Confidence 89999999988 6677788899999999999999998888875 99999999998888888888999999999999998
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE-EEEEeccCCceeEEE
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI-LKTYTGHTNSKYCIS 249 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~ 249 (321)
.+++++.|+.+++||...+.........+.... ...|+|++..+++++.|+.+++|+...... +..+..|......+
T Consensus 213 ~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 290 (466)
T COG2319 213 LIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSV- 290 (466)
T ss_pred EEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEE-
Confidence 455558999999999886665553333333332 237999998888999999999999986654 44444454443333
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec--CCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE--GHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
...+++..+++++.|+.+++|+........... .|...+..+.+.+++..++.+.. .|+.+.+|+...
T Consensus 291 --~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~ 360 (466)
T COG2319 291 --AFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGS-DDGTIRLWDLRT 360 (466)
T ss_pred --EECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeec-CCCcEEeeecCC
Confidence 333567777778888999999998887666655 78888999999433255665532 347888898753
No 163
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1.1e-21 Score=154.88 Aligned_cols=295 Identities=19% Similarity=0.330 Sum_probs=211.8
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccc-cccccEEEEEECCCCCEEEEEeCCCcE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT-GHEQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
+.+|.+.|.++.||+++++|++|+.|..+++|.+....... .++|+.... .|...|.+++|....+++++|..+++|
T Consensus 52 ~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k--~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 52 VREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRK--TPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV 129 (609)
T ss_pred hhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhc--CCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence 56899999999999999999999999999999987654322 334454433 355789999999999999999999999
Q ss_pred EEEecCCcceeeeeecCcc---cEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-EEE--EEeCCCCCeeEEEEccCCC-
Q 020798 98 RLWDVPTATCLKTLIGHTN---YVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-CLK--VLPAHSDPVTAVDFNRDGT- 170 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~--~~~~~~~~v~~~~~~~~~~- 170 (321)
...|+++.+.+... .|.. .|..+..+|..+.|++.+.++.|.+||.+... ... ...........+.|+|...
T Consensus 130 I~HDiEt~qsi~V~-~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~ 208 (609)
T KOG4227|consen 130 IKHDIETKQSIYVA-NENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPA 208 (609)
T ss_pred Eeeecccceeeeee-cccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCce
Confidence 99999998765543 3444 79999999999999999999999999998654 111 1223345678899999754
Q ss_pred EEEEEeCCCeEEEEeCCCCceee-e--ecc---CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMK-T--LID---DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~-~--~~~---~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 244 (321)
++++.+..+-+.+||.+...... . ... .....-....|+|.|+.+++--....-.+||+-..++......|...
T Consensus 209 Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~ 288 (609)
T KOG4227|consen 209 LILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPN 288 (609)
T ss_pred eEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCC
Confidence 66778888889999998653211 1 111 11112245789999998877655555667787664432211122221
Q ss_pred eeE----EEeEEEecCCeEEEEeCCCCeEEEEEccc-----c------------------eEEEEecCCCCCeEEEEecC
Q 020798 245 KYC----ISSTFSVTNGKYIVSGSEDSCVYLWELQS-----R------------------KVVQKLEGHTDPVISVASHP 297 (321)
Q Consensus 245 ~~~----~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-----~------------------~~~~~~~~h~~~v~~~~~~p 297 (321)
.+| +..+.+. +..-+++|+.+=.|++|.+.. + +.+..++||..-++.+.|+|
T Consensus 289 GY~N~~T~KS~~F~-~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~ 367 (609)
T KOG4227|consen 289 GYCNIKTIKSMTFI-DDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQ 367 (609)
T ss_pred cceeeeeeeeeeee-cceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecC
Confidence 222 2222222 344589999999999998732 1 12345789999999999999
Q ss_pred CCceEEEEeecCCccEEEcccc
Q 020798 298 TENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 298 ~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
...+|++.+.. ..+|||..-
T Consensus 368 H~~~l~SSGVE--~~~KlWS~~ 387 (609)
T KOG4227|consen 368 HNNLLVSSGVE--NSFKLWSDH 387 (609)
T ss_pred CcceEeccchh--hheeccccc
Confidence 99999998865 689999753
No 164
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.91 E-value=2.1e-22 Score=166.57 Aligned_cols=241 Identities=27% Similarity=0.394 Sum_probs=183.3
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCE--EEEeeCCCcEEEEec
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM--IVSGAFDETVRIWDV 144 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~dg~i~~wd~ 144 (321)
..+.+|++.|.+|...|.|.+|++|+.||+|+||.+.+++|++.+. ..+.|.|++|+|.++. |+++-. ..+.+.+.
T Consensus 394 lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~-~~~~ivnp 471 (733)
T KOG0650|consen 394 LVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVG-ECVLIVNP 471 (733)
T ss_pred eeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEec-CceEEeCc
Confidence 3567999999999999999999999999999999999999998775 4568999999997653 444433 33444432
Q ss_pred CCC-------------------------------------EEEEEEeCCCCCeeEEEEccCCCEEEEEeCC---CeEEEE
Q 020798 145 KTG-------------------------------------KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD---GLCRIW 184 (321)
Q Consensus 145 ~~~-------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~ 184 (321)
.-| .-+.....|...|.++.|+..|.+|++...+ ..|.|+
T Consensus 472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliH 551 (733)
T KOG0650|consen 472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIH 551 (733)
T ss_pred cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEE
Confidence 111 0012233577889999999999999987653 468888
Q ss_pred eCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeC
Q 020798 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS 264 (321)
Q Consensus 185 d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (321)
++........ +......+..+.|+|...+|++++. ..|+|||+..+.+++.+... ..-++.....+.|..|+.|+
T Consensus 552 QLSK~~sQ~P-F~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg---~kwiS~msihp~GDnli~gs 626 (733)
T KOG0650|consen 552 QLSKRKSQSP-FRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTG---SKWISSMSIHPNGDNLILGS 626 (733)
T ss_pred ecccccccCc-hhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcC---CeeeeeeeecCCCCeEEEec
Confidence 8876543322 2234456889999999999988775 56999999887766655322 22345555567899999999
Q ss_pred CCCeEEEEEcccc-eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 265 EDSCVYLWELQSR-KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 265 ~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
.|+.+..||+.-. +..+.+..|...|++|+||+...++++|+. |+++.++
T Consensus 627 ~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sd--Dgtv~Vf 677 (733)
T KOG0650|consen 627 YDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSD--DGTVIVF 677 (733)
T ss_pred CCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecC--CCcEEEE
Confidence 9999999999754 567788899999999999999999999984 4677665
No 165
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.90 E-value=1.9e-19 Score=155.42 Aligned_cols=290 Identities=41% Similarity=0.757 Sum_probs=220.3
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecC-CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC-EEEEE
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSA-DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR-FLVSA 91 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~~~ 91 (321)
.....+..|...|..++|+|+++.+++++. |+.+++|+... ...+..+.+|...|.+++|+|+++ .++++
T Consensus 146 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 217 (466)
T COG2319 146 KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT--------GKPLSTLAGHTDPVSSLAFSPDGGLLIASG 217 (466)
T ss_pred eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC--------CceEEeeccCCCceEEEEEcCCcceEEEEe
Confidence 456678899999999999999999988886 99999998764 234556667999999999999998 55555
Q ss_pred eCCCcEEEEecCCcceee-eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEE-EEEEeCCCCCeeEEEEccCC
Q 020798 92 SDDKTIRLWDVPTATCLK-TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC-LKVLPAHSDPVTAVDFNRDG 169 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~v~~~~~~~~~ 169 (321)
+.|+.+++||...+.... .+.+|.... ...|+|++..+++++.|+.+++|+.+.... ...+..|...+.++.|.|++
T Consensus 218 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 296 (466)
T COG2319 218 SSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDG 296 (466)
T ss_pred cCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCC
Confidence 999999999988777766 577888775 448999998889999999999999986654 44446778899999999988
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeec-cCCCCCeEEEEEccCCCEEEEE-ecCCeEEEEeCCCCcEEEEEeccCCceeE
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLI-DDENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYSTGKILKTYTGHTNSKYC 247 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 247 (321)
..+++++.|+.+.+||........... ..+...+..+.+.+++..++.+ ..|+.+.+|+............... .
T Consensus 297 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---~ 373 (466)
T COG2319 297 KLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN---V 373 (466)
T ss_pred CEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCce---E
Confidence 888888888889999988776554443 2333357778884333566665 5788999999887763332222211 1
Q ss_pred EEeEEEecCCeEEEE-eCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 248 ISSTFSVTNGKYIVS-GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 248 ~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
....+.. + ..+.. +..++.+.+|+............+...+....+.+++..+++++ .++.+++|+..
T Consensus 374 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 442 (466)
T COG2319 374 LSVSFSP-D-GRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGS--SDNTIRLWDLK 442 (466)
T ss_pred EEEEECC-C-CCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEec--CCCcEEEEecc
Confidence 2223333 3 33443 78999999999998877766655447899999999999999866 35789999875
No 166
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.89 E-value=1.8e-21 Score=153.60 Aligned_cols=213 Identities=20% Similarity=0.372 Sum_probs=167.3
Q ss_pred ccCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCCCc
Q 020798 19 LNGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDDKT 96 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~ 96 (321)
..||.++|..++|+| +...||+||+|.+|.+|++-+... .....+|+..+.+|...|-.+.|+|.. +.|++++.|..
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l-~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGL-TRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCccc-ccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 469999999999998 456899999999999998754322 122336778899999999999999975 67889999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCC-CeeEEEEccCCCEEEEE
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD-PVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~ 175 (321)
|.+||+.+++.+..+. |...|.++.|+.+|++|++.+.|..|++||.++++.+..-..|.+ ....+-|-.++..+-+|
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG 234 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG 234 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence 9999999999877766 999999999999999999999999999999999998887777764 33456677788744444
Q ss_pred e---CCCeEEEEeCCCCcee-eeeccCCCCCeEEEEEccCCCEEEE-EecCCeEEEEeCCCCc
Q 020798 176 S---YDGLCRIWDASTGHCM-KTLIDDENPPVSFVKFSPNGKFILV-GTLDNTLRLWNYSTGK 233 (321)
Q Consensus 176 ~---~dg~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~-~~~d~~i~i~d~~~~~ 233 (321)
- .+..+-+||..+-... .....+....|..--|+++.+.+.. |-.|+.|+.|.+.+..
T Consensus 235 fsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 235 FSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred cccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence 2 4667999997653322 1111133445666678888877655 5579999999987655
No 167
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.89 E-value=4.6e-21 Score=145.99 Aligned_cols=243 Identities=24% Similarity=0.426 Sum_probs=184.0
Q ss_pred eccCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC---CCEEEEEeC
Q 020798 18 TLNGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD---SRFLVSASD 93 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~---~~~l~~~~~ 93 (321)
.-.+|..+|.++.|-| |.-++.+++.|.++++||........ .| .-++.|++-+++|- .-++|+|..
T Consensus 96 h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~--------~F-~me~~VYshamSp~a~sHcLiA~gtr 166 (397)
T KOG4283|consen 96 HENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAV--------DF-KMEGKVYSHAMSPMAMSHCLIAAGTR 166 (397)
T ss_pred CCccceeeeeeeEEeeecCceeecccccceEEEeecccceeeE--------Ee-ecCceeehhhcChhhhcceEEEEecC
Confidence 3468999999999988 56689999999999999876533211 11 12356777778873 346788888
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCE-EEEeeCCCcEEEEecCCC-EEEEE--------------EeCCC
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTG-KCLKV--------------LPAHS 157 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~-~~~~~--------------~~~~~ 157 (321)
+-+|++-|+.++.+.+.+.+|...|.++.|+|...+ |++|+.||.|++||++.. .+... -+.|.
T Consensus 167 ~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~ 246 (397)
T KOG4283|consen 167 DVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHY 246 (397)
T ss_pred CCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccccccccc
Confidence 999999999999999999999999999999998876 688999999999999753 22222 23566
Q ss_pred CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC--CC----CCeEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD--EN----PPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~----~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~ 231 (321)
+.+..++|..++.++++++.|..+++|+..+|+.......+ ++ ..+. +. +.+...++.--.++.+.++++-.
T Consensus 247 gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~s 324 (397)
T KOG4283|consen 247 GKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLE 324 (397)
T ss_pred ceeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccC
Confidence 78999999999999999999999999998877543222111 11 1111 22 22333444445568899999999
Q ss_pred CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 232 GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
+..++.+..|-.. +.+++..++-+...+|.-|+.|..|-.
T Consensus 325 gs~ir~l~~h~k~---i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 325 GSFVRRLSTHLKR---INCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ceEEEeeecccce---eeEEeecCchhhhhccccCCccccccc
Confidence 9999999888433 445566678888999999999999986
No 168
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.89 E-value=1.1e-21 Score=157.31 Aligned_cols=247 Identities=16% Similarity=0.288 Sum_probs=176.2
Q ss_pred cccccccEEEEEECCCC--CEEEEEeCCCcEEEEecCCcc----eeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEE
Q 020798 69 FTGHEQGVSDLVFSSDS--RFLVSASDDKTIRLWDVPTAT----CLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRI 141 (321)
Q Consensus 69 ~~~h~~~i~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~ 141 (321)
..-+.+.|++++|+|.. +.+++|...|+|-+||+.+.+ .+..+..|+.+|.++.|+|.+ ..+++.+.||+|++
T Consensus 182 ~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~ 261 (498)
T KOG4328|consen 182 AKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRL 261 (498)
T ss_pred eEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeee
Confidence 34577899999999965 478899999999999995332 244567899999999999964 67999999999999
Q ss_pred EecCCCEEEEEEeC--CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-EEEEE
Q 020798 142 WDVKTGKCLKVLPA--HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-FILVG 218 (321)
Q Consensus 142 wd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~ 218 (321)
-|++.......+.. ....+.++.|+.+...++++..=|...+||++++........-+...|..++++|... +|+++
T Consensus 262 ~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~ 341 (498)
T KOG4328|consen 262 QDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATA 341 (498)
T ss_pred eeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeec
Confidence 99987643322222 3445667888888777888887779999999987653333333455799999999654 57889
Q ss_pred ecCCeEEEEeCCCCcEEE----EEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc----cceEEEEec-C--CC
Q 020798 219 TLDNTLRLWNYSTGKILK----TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ----SRKVVQKLE-G--HT 287 (321)
Q Consensus 219 ~~d~~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~-~--h~ 287 (321)
+.|++.+|||++...... ....|.. .+...++.|++..|+|.+.|..|+|||.. .......+. . +.
T Consensus 342 s~D~T~kIWD~R~l~~K~sp~lst~~Hrr---sV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~ 418 (498)
T KOG4328|consen 342 SLDQTAKIWDLRQLRGKASPFLSTLPHRR---SVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTG 418 (498)
T ss_pred ccCcceeeeehhhhcCCCCcceecccccc---eeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCccc
Confidence 999999999997643222 2223333 24444445555559999999999999983 222222222 1 11
Q ss_pred CC--eEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 288 DP--VISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 288 ~~--v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.. ....+|.|+.++++.|-. .+.|-|+|.+.
T Consensus 419 RwlT~fKA~W~P~~~li~vg~~--~r~IDv~~~~~ 451 (498)
T KOG4328|consen 419 RWLTPFKAAWDPDYNLIVVGRY--PRPIDVFDGNG 451 (498)
T ss_pred ccccchhheeCCCccEEEEecc--CcceeEEcCCC
Confidence 22 345789999999999874 35688887654
No 169
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.89 E-value=1.8e-21 Score=157.85 Aligned_cols=267 Identities=20% Similarity=0.300 Sum_probs=197.5
Q ss_pred ecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE--EeCCCcEEEEecCCc--ceeeeeecCcc
Q 020798 41 SSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS--ASDDKTIRLWDVPTA--TCLKTLIGHTN 116 (321)
Q Consensus 41 ~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~--~~~d~~i~iwd~~~~--~~~~~~~~~~~ 116 (321)
++....+++||........ . ....+ ...++.++.|..... |++ .+.|..+++|.-... +....-.....
T Consensus 8 aS~gd~~kl~D~s~~~~~~----~-~~~~t-~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd 80 (673)
T KOG4378|consen 8 ASTGDKTKLSDFSDLETKS----E-YVHQT-AEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD 80 (673)
T ss_pred eccCCceEEeecccccCcc----c-cccCC-CCCcceeeeccccce-EEEeecCCceeEEEecccCCCCccceeeccccc
Confidence 3445578899987643211 1 11111 123488999987654 443 456778888864332 11111111222
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec
Q 020798 117 YVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196 (321)
Q Consensus 117 ~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 196 (321)
...|++......++++|+..+.|++||++...+.+.++.|...|+.+.++....++++++..|.|.+..+.++.....+.
T Consensus 81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~ 160 (673)
T KOG4378|consen 81 NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFT 160 (673)
T ss_pred hHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcccccee
Confidence 34566666666899999999999999999777788889999999999999999999999999999999998877666665
Q ss_pred cCCCCCeEEEEEccCCCEE-EEEecCCeEEEEeCCCCcEEEEEe-ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 197 DDENPPVSFVKFSPNGKFI-LVGTLDNTLRLWNYSTGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 197 ~~~~~~~~~~~~~~~g~~l-~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
.+.+..+..+.|+|..+.+ .+++.+|.|.+||+....++..+. .|..+. -..+|++.+..+|++.+.|..|.+||.
T Consensus 161 ~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~--~gicfspsne~l~vsVG~Dkki~~yD~ 238 (673)
T KOG4378|consen 161 IDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPC--RGICFSPSNEALLVSVGYDKKINIYDI 238 (673)
T ss_pred cCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCc--CcceecCCccceEEEecccceEEEeec
Confidence 5556667789999977665 567889999999998877776553 344443 344677777888999999999999999
Q ss_pred ccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 275 QSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 275 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
...+...++.. ..|...++|.++|.+|+.|. ..|.|..||+.
T Consensus 239 ~s~~s~~~l~y-~~Plstvaf~~~G~~L~aG~--s~G~~i~YD~R 280 (673)
T KOG4378|consen 239 RSQASTDRLTY-SHPLSTVAFSECGTYLCAGN--SKGELIAYDMR 280 (673)
T ss_pred ccccccceeee-cCCcceeeecCCceEEEeec--CCceEEEEecc
Confidence 98877766653 45899999999999999997 46899999985
No 170
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.88 E-value=3.7e-21 Score=160.35 Aligned_cols=253 Identities=20% Similarity=0.284 Sum_probs=178.6
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCCC
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDDK 95 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~ 95 (321)
+....|...|..+.|.|....|++++.|.+++.||+..... .-...+.+|.+.|.+++|.|+. ..|++|+.||
T Consensus 94 k~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l------~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg 167 (720)
T KOG0321|consen 94 KKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL------VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDG 167 (720)
T ss_pred cccccccceeEeeccCCCceeEEEccCCceeeeeeecccee------ecceeecccccccchhhhccCCCcceeeccCCC
Confidence 44568999999999999667899999999999999865321 1123467999999999999965 4678999999
Q ss_pred cEEEEecCCcc--------------------e-------eeeeecCcccEEE---EEECCCCCEEEEeeC-CCcEEEEec
Q 020798 96 TIRLWDVPTAT--------------------C-------LKTLIGHTNYVFC---VNFNPQSNMIVSGAF-DETVRIWDV 144 (321)
Q Consensus 96 ~i~iwd~~~~~--------------------~-------~~~~~~~~~~v~~---~~~~~~~~~l~~~~~-dg~i~~wd~ 144 (321)
.|.|||++-.. . .....++...|.+ +.+..|...|++++. |+.|+|||+
T Consensus 168 ~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDL 247 (720)
T KOG0321|consen 168 EILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDL 247 (720)
T ss_pred cEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEee
Confidence 99999985322 0 0112234455555 556778889999887 999999999
Q ss_pred CCCEEEEE--------EeCC---CCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCcee--eeeccCCCCC-eEEEEEcc
Q 020798 145 KTGKCLKV--------LPAH---SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM--KTLIDDENPP-VSFVKFSP 210 (321)
Q Consensus 145 ~~~~~~~~--------~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~--~~~~~~~~~~-~~~~~~~~ 210 (321)
+....... +.-| .-.+.++.....|.+|.+.+.|+.|++|++...... ..+....... ...-..+|
T Consensus 248 Rk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSp 327 (720)
T KOG0321|consen 248 RKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSP 327 (720)
T ss_pred cccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCC
Confidence 86543221 1222 123566677777888888788999999998754321 1111111111 11234789
Q ss_pred CCCEEEEEecCCeEEEEeCCCCc-EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc
Q 020798 211 NGKFILVGTLDNTLRLWNYSTGK-ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR 277 (321)
Q Consensus 211 ~g~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (321)
++.++++|+.|....+|.+.+.+ ....+.+|...+.++..+.. .-.-+++++.|-.+++|++..+
T Consensus 328 d~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS--~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 328 DDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPS--ATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred CCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccc--cCCCceeeccCcceEEEeccCc
Confidence 99999999999999999998764 35566788777766654432 3334677799999999998543
No 171
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.88 E-value=2.9e-21 Score=162.10 Aligned_cols=242 Identities=21% Similarity=0.377 Sum_probs=181.6
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
.+.++|+||+..|+|++|+.||+.+|+|+.|..+.+|.-. .+-+.. -.|.+.|.|+.|+|-...|++++.
T Consensus 44 ~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k---------lEG~Lk-YSH~D~IQCMsFNP~~h~LasCsL 113 (1081)
T KOG1538|consen 44 TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK---------LEGILK-YSHNDAIQCMSFNPITHQLASCSL 113 (1081)
T ss_pred ccccccccccceEEEEEEccCCceeccCCCceeEEEeccc---------ccceee-eccCCeeeEeecCchHHHhhhcch
Confidence 4778999999999999999999999999999999999421 111222 368999999999999999998875
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe---CCCCCeeEEEEccCC-
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP---AHSDPVTAVDFNRDG- 169 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~---~~~~~v~~~~~~~~~- 169 (321)
+ ..-+|..+.....+. .....+.+++|..||.+|+-|-.+|+|.+-+- +++..-.+. +.+.+|++++|+|..
T Consensus 114 s-dFglWS~~qK~V~K~--kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg 189 (1081)
T KOG1538|consen 114 S-DFGLWSPEQKSVSKH--KSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSG 189 (1081)
T ss_pred h-hccccChhhhhHHhh--hhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCC
Confidence 4 467887655433221 13456889999999999999999999998864 344333333 356899999999963
Q ss_pred ----CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 170 ----TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 170 ----~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
..+++.....++.++.+.....-+.- .-+-...++.+.++|.+++.|+.|+.+++|- +.|-.+.+......-+
T Consensus 190 ~G~~di~aV~DW~qTLSFy~LsG~~Igk~r--~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WI 266 (1081)
T KOG1538|consen 190 EGRNDILAVADWGQTLSFYQLSGKQIGKDR--ALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWI 266 (1081)
T ss_pred CCccceEEEEeccceeEEEEecceeecccc--cCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeE
Confidence 36888889999999988753322111 1122345788999999999999999999997 5666666664433333
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
+. ....|+++.++.|+.||+|..|++.
T Consensus 267 Wt---V~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 267 WT---VQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred EE---EEEccCCceEEEEEccCeeehhhhH
Confidence 33 2345899999999999999999874
No 172
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.88 E-value=2.3e-21 Score=145.31 Aligned_cols=290 Identities=17% Similarity=0.248 Sum_probs=186.7
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccc-cccccEEEEEECCCCCEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT-GHEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~~~~~~l~~ 90 (321)
|.+..-.|.+|...|+++.|-.+++ |.+|..-|.+++|++.... +...+. .|...|+.+.--|+ ..|.+
T Consensus 3 pPdP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r--------~~~~~r~~g~~~it~lq~~p~-d~l~t 72 (323)
T KOG0322|consen 3 PPDPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTER--------DLPLIRLFGRLFITNLQSIPN-DSLDT 72 (323)
T ss_pred CCCCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCc--------cchhhhhhccceeeceeecCC-cchhh
Confidence 4455556669999999999987765 8899999999999987532 233344 45667888888887 45888
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEEC-----CCCC---E-EEEeeCCCc-EEEEecCCCEEEEEEe----CC
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN-----PQSN---M-IVSGAFDET-VRIWDVKTGKCLKVLP----AH 156 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-----~~~~---~-l~~~~~dg~-i~~wd~~~~~~~~~~~----~~ 156 (321)
-+.|..+.+|++.....+.. |+-.+.++-|. ++++ + ++.-+.... +++-|......+...+ ..
T Consensus 73 qgRd~~L~lw~ia~s~~i~i---~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~K 149 (323)
T KOG0322|consen 73 QGRDPLLILWTIAYSAFISI---HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSK 149 (323)
T ss_pred cCCCceEEEEEccCcceEEE---eeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccc
Confidence 89999999999977543321 22222222222 2211 1 121111110 1222221111111111 12
Q ss_pred CCCeeEEEEccC-CC--EEEEEeCCCeEEEEeCCCCceeeee---------ccCCCCCeEEEEEccCCCEEEEEecCCeE
Q 020798 157 SDPVTAVDFNRD-GT--MIVTSSYDGLCRIWDASTGHCMKTL---------IDDENPPVSFVKFSPNGKFILVGTLDNTL 224 (321)
Q Consensus 157 ~~~v~~~~~~~~-~~--~l~~~~~dg~i~~~d~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~l~~~~~d~~i 224 (321)
.+.+++..+..+ +. ++++|.++|.+.+||+.++..+..+ ...+..++..+.+.+.-..=+.|+.+..+
T Consensus 150 lgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl 229 (323)
T KOG0322|consen 150 LGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKL 229 (323)
T ss_pred cCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccc
Confidence 345555554332 22 4567778999999999886322211 22455678888888765555677778889
Q ss_pred EEEeCCCC--cE-EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCce
Q 020798 225 RLWNYSTG--KI-LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENI 301 (321)
Q Consensus 225 ~i~d~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 301 (321)
..|++... .. ++......++ .+.-....+|++.+|+++.|+.||||..++.+.+..++.|...|++++|+|+..+
T Consensus 230 ~~~Sl~~s~gslq~~~e~~lknp--Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~l 307 (323)
T KOG0322|consen 230 VMYSLNHSTGSLQIRKEITLKNP--GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCEL 307 (323)
T ss_pred eeeeeccccCcccccceEEecCC--CccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCch
Confidence 99987542 21 1111111111 1122223479999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCccEEEccc
Q 020798 302 IASGALDNDRTVKIWTQ 318 (321)
Q Consensus 302 l~s~~~d~~~~i~iw~~ 318 (321)
+|++|. |.+|.+|++
T Consensus 308 mAaask--D~rISLWkL 322 (323)
T KOG0322|consen 308 MAAASK--DARISLWKL 322 (323)
T ss_pred hhhccC--CceEEeeec
Confidence 999995 489999985
No 173
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.88 E-value=1.7e-20 Score=142.43 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=180.1
Q ss_pred eeccCCcccEEEEEECCC-CCEEEEecCC-------ceEEEeeccccCCC-CCCCCCcccccc-cccccEEEEEECCCCC
Q 020798 17 QTLNGHLRAISSVKFSHD-GRLLASSSAD-------KTLLTYSLSSISNS-DSTPPSPLQKFT-GHEQGVSDLVFSSDSR 86 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~-g~~l~~~~~d-------~~v~~~~~~~~~~~-~~~~~~~~~~~~-~h~~~i~~~~~~~~~~ 86 (321)
+.+..|.+.|..++-+|- .++|+++.++ -...+|.+.+.... ...+.+.+..+. .+-+.|.|+.|.|++.
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~ 136 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD 136 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence 345678899999999994 5677777552 23557877553322 122233333443 4556899999999998
Q ss_pred EEEEEeCCCcEEEEecCCcce-eeee-----ecCcccEEEEEECC--CCCEEEEeeCCCcEEEEecCCCEEEEEE-eCCC
Q 020798 87 FLVSASDDKTIRLWDVPTATC-LKTL-----IGHTNYVFCVNFNP--QSNMIVSGAFDETVRIWDVKTGKCLKVL-PAHS 157 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~-~~~~-----~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~ 157 (321)
.+++-. |..|.+|++..... ...+ ..+....++-+|+| +++.+++. .|++++.||+++.++...+ ..|.
T Consensus 137 klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHg 214 (370)
T KOG1007|consen 137 KLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHG 214 (370)
T ss_pred eeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhc
Confidence 887654 88999999977654 2221 22455577888988 67888775 4799999999987665544 5788
Q ss_pred CCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC-CCEEEEEecCCeEEEEeCCCC---
Q 020798 158 DPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTG--- 232 (321)
Q Consensus 158 ~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~~--- 232 (321)
..+..+.|+|+.. +|++|+.||.+++||.+..+.....+.++..-+.++.|+|. .+++++++.|..+.+|....-
T Consensus 215 q~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE 294 (370)
T KOG1007|consen 215 QRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSE 294 (370)
T ss_pred ceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccc
Confidence 8899999999866 67889999999999999776655555677778999999995 567788999999999975321
Q ss_pred --------------------------cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 233 --------------------------KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 233 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
..+.++..|...++++ .|+..+.-.+|+-+.||.+.|=.+
T Consensus 295 ~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~--aWSsadPWiFASLSYDGRviIs~V 360 (370)
T KOG1007|consen 295 QQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYAL--AWSSADPWIFASLSYDGRVIISSV 360 (370)
T ss_pred cccccccccccCcchhhHHhcccccccccccccccccceEEE--eeccCCCeeEEEeccCceEEeecC
Confidence 1233455566666554 344556677777788887766443
No 174
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.87 E-value=1.5e-18 Score=144.92 Aligned_cols=270 Identities=9% Similarity=0.173 Sum_probs=173.5
Q ss_pred EEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe-CCCcEEEEecCC-cce--eeeeecC
Q 020798 39 ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS-DDKTIRLWDVPT-ATC--LKTLIGH 114 (321)
Q Consensus 39 ~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~-~~~--~~~~~~~ 114 (321)
++...++.|.+|++... .....+..+. +......++++|++++|++++ .++.|.+|++.. ++. .... ..
T Consensus 6 ~~~~~~~~I~~~~~~~~-----g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~ 78 (330)
T PRK11028 6 IASPESQQIHVWNLNHE-----GALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PL 78 (330)
T ss_pred EEcCCCCCEEEEEECCC-----CceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee-cC
Confidence 33467899999988421 1112223332 234567889999999887664 578899999863 332 1222 12
Q ss_pred cccEEEEEECCCCCEEEEee-CCCcEEEEecCCC-E---EEEEEeCCCCCeeEEEEccCCCEEEEEe-CCCeEEEEeCCC
Q 020798 115 TNYVFCVNFNPQSNMIVSGA-FDETVRIWDVKTG-K---CLKVLPAHSDPVTAVDFNRDGTMIVTSS-YDGLCRIWDAST 188 (321)
Q Consensus 115 ~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~-~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~ 188 (321)
......++++|+++++++++ .++.|.+|++.+. . ....+. +......++++|+++++++++ .++.|.+||+.+
T Consensus 79 ~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 79 PGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred CCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 33456899999999888776 4789999998642 1 222222 223457788999998876554 679999999976
Q ss_pred Cceeee-----eccCCCCCeEEEEEccCCCEEEEEec-CCeEEEEeCCC--Cc--EEEEEeccC----CceeEEEeEEEe
Q 020798 189 GHCMKT-----LIDDENPPVSFVKFSPNGKFILVGTL-DNTLRLWNYST--GK--ILKTYTGHT----NSKYCISSTFSV 254 (321)
Q Consensus 189 ~~~~~~-----~~~~~~~~~~~~~~~~~g~~l~~~~~-d~~i~i~d~~~--~~--~~~~~~~~~----~~~~~~~~~~~~ 254 (321)
...+.. ...........++|+|+|++++++.. ++.|.+|++.. ++ .+..+.... ...+... ....
T Consensus 158 ~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-i~~~ 236 (330)
T PRK11028 158 DGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAAD-IHIT 236 (330)
T ss_pred CCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCcccee-EEEC
Confidence 322211 11112334567899999999988876 89999999873 32 233332111 1112222 2234
Q ss_pred cCCeEEEEeC-CCCeEEEEEcccce----EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 255 TNGKYIVSGS-EDSCVYLWELQSRK----VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 255 ~~~~~l~~~~-~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+++++++++. .++.|.+|++.... .+...... .....+.++|+|++|+++.. .++.|.+|+.+
T Consensus 237 pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~-~~p~~~~~~~dg~~l~va~~-~~~~v~v~~~~ 304 (330)
T PRK11028 237 PDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE-TQPRGFNIDHSGKYLIAAGQ-KSHHISVYEID 304 (330)
T ss_pred CCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc-ccCCceEECCCCCEEEEEEc-cCCcEEEEEEc
Confidence 7888888875 47899999986432 22222221 23468899999999998875 36799999864
No 175
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.87 E-value=1.1e-20 Score=157.86 Aligned_cols=260 Identities=19% Similarity=0.327 Sum_probs=182.6
Q ss_pred CCCEEEE--ecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC-CCCEEEEEeCCCcEEEEecCCc-----
Q 020798 34 DGRLLAS--SSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS-DSRFLVSASDDKTIRLWDVPTA----- 105 (321)
Q Consensus 34 ~g~~l~~--~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~----- 105 (321)
+...+|+ .+..|.|-||++.+--+ .+...+-.+. ....|.++.|.| |...|+.++.||.|++|.+..+
T Consensus 590 n~~rvAVPL~g~gG~iai~el~~PGr---LPDgv~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~ 665 (1012)
T KOG1445|consen 590 NNKRVAVPLAGSGGVIAIYELNEPGR---LPDGVMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPEN 665 (1012)
T ss_pred ccceEEEEecCCCceEEEEEcCCCCC---CCcccccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcc
Confidence 4455554 46688999998865221 1111111111 245689999998 6678999999999999998654
Q ss_pred --ceeeeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEE
Q 020798 106 --TCLKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCR 182 (321)
Q Consensus 106 --~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 182 (321)
+....+.+|.+.|.++.|+|- .+.|++++.|.+|++||+++++....+.+|.+.|..++|+|+|+.+++.+.||+++
T Consensus 666 ~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~r 745 (1012)
T KOG1445|consen 666 EMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLR 745 (1012)
T ss_pred cCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEE
Confidence 234567889999999999995 46889999999999999999998889999999999999999999999999999999
Q ss_pred EEeCCCCcee-eeeccCCCCCeEEEEEccCCCEEEEEecC----CeEEEEeCCCCc--EEEEEeccCCceeEEEeEEEec
Q 020798 183 IWDASTGHCM-KTLIDDENPPVSFVKFSPNGKFILVGTLD----NTLRLWNYSTGK--ILKTYTGHTNSKYCISSTFSVT 255 (321)
Q Consensus 183 ~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~d----~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
+|..++.+.. ..-....+..-..+.|..+|+++++.+.| .+|.+||.++-. .+........+. .+.-.+..+
T Consensus 746 Vy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps-~LvP~YD~D 824 (1012)
T KOG1445|consen 746 VYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPS-PLVPHYDYD 824 (1012)
T ss_pred EeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCc-cccccccCC
Confidence 9999876432 22111222334567888999999988766 468999876533 333322211111 122223334
Q ss_pred CCeEEEEeCCCCeEEEEEcccceE-EEEecCCCCCe--EEEEecCC
Q 020798 256 NGKYIVSGSEDSCVYLWELQSRKV-VQKLEGHTDPV--ISVASHPT 298 (321)
Q Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~h~~~v--~~~~~~p~ 298 (321)
.+-++++|-.|..|.+|++-.... +-.+..|..++ ..++|.+.
T Consensus 825 s~~lfltGKGD~~v~~yEv~~esPy~lpl~~f~sp~~hqGl~fl~K 870 (1012)
T KOG1445|consen 825 SNVLFLTGKGDRFVNMYEVIYESPYLLPLAPFMSPVGHQGLAFLQK 870 (1012)
T ss_pred CceEEEecCCCceEEEEEecCCCceeeecccccCCCcccceeeecc
Confidence 567889999999999999854432 33344444443 34566554
No 176
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.9e-20 Score=145.23 Aligned_cols=272 Identities=21% Similarity=0.363 Sum_probs=190.9
Q ss_pred CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--CCCEEEEEeCCCcEEEEecCCcceeee--e
Q 020798 36 RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--DSRFLVSASDDKTIRLWDVPTATCLKT--L 111 (321)
Q Consensus 36 ~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~--~ 111 (321)
+.+|++-..|.+++||..+ ...+..+++|...++.+.|.. ....+.+|+.||+|++||++....... .
T Consensus 41 ~~vav~lSngsv~lyd~~t--------g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~ 112 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGT--------GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISW 112 (376)
T ss_pred eeEEEEecCCeEEEEeccc--------hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheec
Confidence 5688888899999998754 335677888888888999976 356788999999999999988754433 3
Q ss_pred ecCc-ccEEEEEECCCCCEEEEee----CCCcEEEEecCCCEE-EE-EEeCCCCCeeEEEEccC-CCEEEEEeCCCeEEE
Q 020798 112 IGHT-NYVFCVNFNPQSNMIVSGA----FDETVRIWDVKTGKC-LK-VLPAHSDPVTAVDFNRD-GTMIVTSSYDGLCRI 183 (321)
Q Consensus 112 ~~~~-~~v~~~~~~~~~~~l~~~~----~dg~i~~wd~~~~~~-~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~ 183 (321)
..+. .+..+++.+-.++.+++|. .+-.+.+||++..+. +. ....|.+.|+++.|+|. .++|++|+-||.+.+
T Consensus 113 ~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnl 192 (376)
T KOG1188|consen 113 TQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNL 192 (376)
T ss_pred cCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEe
Confidence 3444 4566777766777777764 356799999987764 33 34679999999999996 468999999999999
Q ss_pred EeCCCCceeeee--ccCCCCCeEEEEEccCC-CEEEEEecCCeEEEEeCCCCcEEEEEeccC----------CceeEEEe
Q 020798 184 WDASTGHCMKTL--IDDENPPVSFVKFSPNG-KFILVGTLDNTLRLWNYSTGKILKTYTGHT----------NSKYCISS 250 (321)
Q Consensus 184 ~d~~~~~~~~~~--~~~~~~~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~~~~~~~~ 250 (321)
||+.....-..+ .-.+...|..+.|..++ +.|.+-+......+|++..+.....+.... .-.+.+..
T Consensus 193 fD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~ 272 (376)
T KOG1188|consen 193 FDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINE 272 (376)
T ss_pred eecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeec
Confidence 998754221111 11344568889998877 347777888899999998877544443221 11122322
Q ss_pred EEEecCCeEEEEeCC-CCeEEEEEcc---cc---eEEEEecC-CCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 251 TFSVTNGKYIVSGSE-DSCVYLWELQ---SR---KVVQKLEG-HTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 251 ~~~~~~~~~l~~~~~-dg~i~vwd~~---~~---~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
.++.+...++.++. -+...++-+. ++ +.+..+.+ |..-|+++.|...+..+-|||+ ||.+.+|..
T Consensus 273 -~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGE--DG~l~~Wk~ 345 (376)
T KOG1188|consen 273 -HSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGE--DGLLQAWKV 345 (376)
T ss_pred -ccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCC--CceEEEEec
Confidence 22334444444444 5666655443 22 23445555 6677899999999999999994 589999983
No 177
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=4.5e-19 Score=153.12 Aligned_cols=291 Identities=18% Similarity=0.283 Sum_probs=204.9
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
.|...+++.++||.++++|+|..||.|.+|.--... ........+.=|...|.+++|+++|.+|++|+..+.+.+|
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~----~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~W 278 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS----DDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLW 278 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccc----cccccceEEEecccccceeEEecCCceEeecccceEEEEE
Confidence 477779999999999999999999999999543211 1112233455588899999999999999999999999999
Q ss_pred ecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC-----------CCCCeeEEEEccCC
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA-----------HSDPVTAVDFNRDG 169 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-----------~~~~v~~~~~~~~~ 169 (321)
.+++++ .+-+..-.+.|..+.++||++..+....|..|.+....+.+....+.+ ..+-.+.++++|.-
T Consensus 279 q~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~ 357 (792)
T KOG1963|consen 279 QLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRT 357 (792)
T ss_pred eecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCC
Confidence 999987 445566788899999999999999999999999987654443322211 12345678899977
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeecc-------C---CCCCeEEEEEccCCCEEEEEe--------cCC--eEEEEeC
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLID-------D---ENPPVSFVKFSPNGKFILVGT--------LDN--TLRLWNY 229 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~-------~---~~~~~~~~~~~~~g~~l~~~~--------~d~--~i~i~d~ 229 (321)
+.++..+..|.+.+||+-+...+..+.. + ..-.+..++.+..|.++++.- .|| .+++|..
T Consensus 358 ~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~ 437 (792)
T KOG1963|consen 358 NSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQY 437 (792)
T ss_pred CceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEE
Confidence 7888899999999999876543332210 0 112355666777799988863 222 5788875
Q ss_pred CCCc----EEEEEeccCCceeEEEeEEEecCCe-EEEEeCCCCeEEEEEcccce----------EEEEecCCCCCeEEEE
Q 020798 230 STGK----ILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRK----------VVQKLEGHTDPVISVA 294 (321)
Q Consensus 230 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~----------~~~~~~~h~~~v~~~~ 294 (321)
.... +...+....+... +..++..+... ..++++.||.+++|-+...+ +...-.-|..++++++
T Consensus 438 n~~~kt~~L~T~I~~PH~~~~-vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~ 516 (792)
T KOG1963|consen 438 NPNSKTFILNTKINNPHGNAF-VATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALC 516 (792)
T ss_pred cCCcceeEEEEEEecCCCcee-EEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchh
Confidence 4332 2223322222222 33333333333 78999999999999984322 1111123778999999
Q ss_pred ecCCCceEEEEeecCCccEEEccccc
Q 020798 295 SHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 295 ~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
|+.||..|+.+- ++.|.|||..+
T Consensus 517 fs~dGslla~s~---~~~Itiwd~~~ 539 (792)
T KOG1963|consen 517 FSQDGSLLAVSF---DDTITIWDYDT 539 (792)
T ss_pred hcCCCcEEEEec---CCEEEEecCCC
Confidence 999998888864 36899999864
No 178
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.5e-19 Score=158.79 Aligned_cols=293 Identities=20% Similarity=0.309 Sum_probs=196.3
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--CCCEEEEEeCCCcE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--DSRFLVSASDDKTI 97 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--~~~~l~~~~~d~~i 97 (321)
++....-..+.|+|=...++++.....|.+||.++.......... ......|+.+.+-. |..++++|+.||.|
T Consensus 1061 ~~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~-----~~~~t~Vs~l~liNe~D~aLlLtas~dGvI 1135 (1387)
T KOG1517|consen 1061 TGNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNG-----AFPDTRVSDLELINEQDDALLLTASSDGVI 1135 (1387)
T ss_pred hcCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCC-----CCCCCccceeeeecccchhheeeeccCceE
Confidence 344445667889998889999988889999998754321111110 01235688888754 45688999999999
Q ss_pred EEEecCC-----cceeeeeec-------CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC-CCCeeEEE
Q 020798 98 RLWDVPT-----ATCLKTLIG-------HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH-SDPVTAVD 164 (321)
Q Consensus 98 ~iwd~~~-----~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~ 164 (321)
+||+-.. .+.+....+ ..+.-.-++|..+...|+++|.-..|++||.........++.. +..++++.
T Consensus 1136 RIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS 1215 (1387)
T KOG1517|consen 1136 RIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALS 1215 (1387)
T ss_pred EEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeec
Confidence 9997321 222222211 1122234677777778888887899999999888777776543 34456665
Q ss_pred Ec-cCCCEEEEEeCCCeEEEEeCCCCce--eeeeccCCCC--CeEEEEEccCCCE-EEEEecCCeEEEEeCCCCcEEEEE
Q 020798 165 FN-RDGTMIVTSSYDGLCRIWDASTGHC--MKTLIDDENP--PVSFVKFSPNGKF-ILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 165 ~~-~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~--~~~~~~~~~~g~~-l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
-+ +.|+.+++|-.||.+++||.+.... .......+.. +|..+.+.+.|-- |++|+.||.|++||++.......+
T Consensus 1216 ~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~ 1295 (1387)
T KOG1517|consen 1216 ADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFL 1295 (1387)
T ss_pred ccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccc
Confidence 43 3468999999999999999876432 2222333433 3778888886644 999999999999999874222211
Q ss_pred e--ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC-------CCCCeEEEEecCCCceEEEEeecC
Q 020798 239 T--GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG-------HTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 239 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
. .|-.....++..........+|+|+. +.|+||++...+ +..++. -...+.+++|||...+||+|+ .
T Consensus 1296 ~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~-l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~--~ 1371 (1387)
T KOG1517|consen 1296 TIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQ-LNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGS--A 1371 (1387)
T ss_pred eeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhh-hcccccCcccccCcCCCcceeeecchhHhhhhcc--C
Confidence 1 11100012445555677889999988 999999986433 222222 134679999999999999997 4
Q ss_pred CccEEEcccccC
Q 020798 310 DRTVKIWTQEKE 321 (321)
Q Consensus 310 ~~~i~iw~~~~~ 321 (321)
|..|.||..+|+
T Consensus 1372 Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1372 DSTVSIYSCEKP 1383 (1387)
T ss_pred CceEEEeecCCc
Confidence 579999998764
No 179
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.86 E-value=1.8e-20 Score=144.64 Aligned_cols=244 Identities=21% Similarity=0.424 Sum_probs=173.7
Q ss_pred CCcccEEEEEECCC----CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCCC
Q 020798 21 GHLRAISSVKFSHD----GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDDK 95 (321)
Q Consensus 21 ~h~~~v~~~~~s~~----g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~ 95 (321)
.|.+.-..++|+-+ ..++|.|+.-|.|++.|+... .....+.+|...|+.+.+.|+. +++++++.|.
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~--------~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~ 158 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSG--------QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDH 158 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchh--------hhccceeccCccchhhhcCCCCCcEEEEecCCc
Confidence 37777888888754 347899999999999987543 3345678999999999999975 6888999999
Q ss_pred cEEEEecCCcceeeee---ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE---------------EE----
Q 020798 96 TIRLWDVPTATCLKTL---IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK---------------VL---- 153 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~---------------~~---- 153 (321)
+|++|++++..++..+ .+|...|.++.|++++.+|++++.|..|++|++...+... .+
T Consensus 159 svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~ 238 (385)
T KOG1034|consen 159 SVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPK 238 (385)
T ss_pred eEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccc
Confidence 9999999999987655 6799999999999999999999999999999987321100 01
Q ss_pred ---------eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCC-CCceeee---------ec---cCCCCCeEEE--EEc
Q 020798 154 ---------PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-TGHCMKT---------LI---DDENPPVSFV--KFS 209 (321)
Q Consensus 154 ---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~~~~---------~~---~~~~~~~~~~--~~~ 209 (321)
.-|...|-++.|- |+++++-+-++.|..|... -++.... ++ .-....+..+ +|+
T Consensus 239 ~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d 316 (385)
T KOG1034|consen 239 THFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFD 316 (385)
T ss_pred cccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeec
Confidence 1133334444443 5788888888999999762 1111111 11 1112234444 556
Q ss_pred cCCCEEEEEecCCeEEEEeCCCCcEE--EEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 210 PNGKFILVGTLDNTLRLWNYSTGKIL--KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 210 ~~g~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
|-+++|+.|...|.+.+||++...+. .++..+. ....+.-.....|+..|+..+.|++|-=||..
T Consensus 317 ~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~-~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 317 PWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSK-SGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred HHHHHHhhccCCCcEEEEECCCCCCccCceEEecc-ccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 77899999999999999999876552 1222221 12223323334689999999999999888853
No 180
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.85 E-value=4.8e-21 Score=164.25 Aligned_cols=279 Identities=25% Similarity=0.425 Sum_probs=212.1
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
+.|-||..+|+|+.|...|.++++|+.|..++||...+ ...+..+.||.+.|+.++.+.+.-++++++.|..
T Consensus 184 krLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et--------~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~v 255 (1113)
T KOG0644|consen 184 KRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMET--------ARCLASCRGHSGDITDLAVSSNNTMIAAASNDKV 255 (1113)
T ss_pred HHHHhhhhheeeeeeccccceEeecCccceeeeeeccc--------hhhhccCCCCccccchhccchhhhhhhhcccCce
Confidence 34669999999999999999999999999999997543 3467788999999999999998889999999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE---E-eCCCCCeeEEEEccCCCEE
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV---L-PAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~---~-~~~~~~v~~~~~~~~~~~l 172 (321)
|++|.+..+.++..+.+|++.|++++|+|-. +.+.||++++||.+-...+.. . ......+-++-|...+..+
T Consensus 256 IrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f 331 (1113)
T KOG0644|consen 256 IRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRF 331 (1113)
T ss_pred EEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccccc
Confidence 9999999999999999999999999999954 778999999999872111110 0 0122445667777778889
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 251 (321)
++++.|+.-..|....... ....+..+..+.+ ..+.+++-.+-.+.+|++.++.+++...+|....+.+..
T Consensus 332 ~Tgs~d~ea~n~e~~~l~~-------~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~- 403 (1113)
T KOG0644|consen 332 LTGSRDGEARNHEFEQLAW-------RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDV- 403 (1113)
T ss_pred ccccCCcccccchhhHhhh-------hccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeee-
Confidence 9999999887776542111 0111111222212 245566677888999999999999999888887766543
Q ss_pred EEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
.+-+.+...+++.||...|||+-.+..++.+......+...+|+++|..++.. |.-|.+.|...
T Consensus 404 -Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~ls--d~hgql~i~g~ 467 (1113)
T KOG0644|consen 404 -HPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALS--DDHGQLYILGT 467 (1113)
T ss_pred -cCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecC--CCCCceEEecc
Confidence 34466777889999999999998887766554335678889999999888863 34567777543
No 181
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.85 E-value=6.3e-19 Score=136.04 Aligned_cols=239 Identities=23% Similarity=0.438 Sum_probs=174.1
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecCCcce------------eeee-ecCcccEEEEEEC-------CCCCEEEEeeC
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATC------------LKTL-IGHTNYVFCVNFN-------PQSNMIVSGAF 135 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------------~~~~-~~~~~~v~~~~~~-------~~~~~l~~~~~ 135 (321)
...+.|+|||..|++-+.|..+.+|++...-. ...+ ......|...+|- |+.+++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 34578999999999999999999999843110 0011 1123445555553 67788999999
Q ss_pred CCcEEEEecCCCEEEEEEeC--CC---CCeeEEEEccCCCEEEEEeCCCeEEEEeC-CCCceee---eecc---CCCCCe
Q 020798 136 DETVRIWDVKTGKCLKVLPA--HS---DPVTAVDFNRDGTMIVTSSYDGLCRIWDA-STGHCMK---TLID---DENPPV 203 (321)
Q Consensus 136 dg~i~~wd~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~~~~~dg~i~~~d~-~~~~~~~---~~~~---~~~~~~ 203 (321)
+.-|++||.-+|+....+.. |. ....+++|+|||..|++| ....|++||+ +.+.... .... .....+
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~gii 210 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII 210 (406)
T ss_pred cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhccccccccee
Confidence 99999999999987766543 22 245789999999988655 5578999999 5543211 1111 223467
Q ss_pred EEEEEccCCC-EEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeC-CCCeEEEEEcccc-eEE
Q 020798 204 SFVKFSPNGK-FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS-EDSCVYLWELQSR-KVV 280 (321)
Q Consensus 204 ~~~~~~~~g~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~-~~~ 280 (321)
.+++|+|... .+++++....+-||.-..+.++..+-+|.+.+..+.. -++|..|.+|+ .|-.|..||++.. ..+
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~---~edGn~lfsGaRk~dkIl~WDiR~~~~pv 287 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQW---CEDGNKLFSGARKDDKILCWDIRYSRDPV 287 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEe---ccCcCeecccccCCCeEEEEeehhccchh
Confidence 8899999654 7888998889999988888999999899887665543 36888888886 4678999999865 456
Q ss_pred EEecCCCC-Ce--EEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 281 QKLEGHTD-PV--ISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 281 ~~~~~h~~-~v--~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..+..|.. .- .-....|++++||+|+ .+|.|++||.++
T Consensus 288 ~~L~rhv~~TNQRI~FDld~~~~~LasG~--tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 288 YALERHVGDTNQRILFDLDPKGEILASGD--TDGSVRVWDLKD 328 (406)
T ss_pred hhhhhhccCccceEEEecCCCCceeeccC--CCccEEEEecCC
Confidence 66766654 22 2344578999999997 458999999875
No 182
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.85 E-value=4.3e-19 Score=140.67 Aligned_cols=262 Identities=25% Similarity=0.361 Sum_probs=177.3
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCC--------CCcccccccccccEEEEEECCCC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTP--------PSPLQKFTGHEQGVSDLVFSSDS 85 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~--------~~~~~~~~~h~~~i~~~~~~~~~ 85 (321)
.....|..|.++|++++|+|+|++||+|+.+|.+.+|............ ......+.+|...|..++|+|++
T Consensus 56 ~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~ 135 (434)
T KOG1009|consen 56 EYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDS 135 (434)
T ss_pred EEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCC
Confidence 3456688999999999999999999999999999999766321110001 11223456899999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe-----------
Q 020798 86 RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP----------- 154 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~----------- 154 (321)
.++++++.|+.+++||+..+.....+..|...+..++|.|-+.++++-+.|...+.+.+...+.++...
T Consensus 136 ~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~ 215 (434)
T KOG1009|consen 136 NFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNE 215 (434)
T ss_pred ceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCC
Confidence 999999999999999999999999999999999999999999999988888877777654332221110
Q ss_pred --------CCC----CCeeEEEEccCCCEEEEEeC----CC-----eEEEEeCCCC-ceeeeeccCCCCCeEEEEEc---
Q 020798 155 --------AHS----DPVTAVDFNRDGTMIVTSSY----DG-----LCRIWDASTG-HCMKTLIDDENPPVSFVKFS--- 209 (321)
Q Consensus 155 --------~~~----~~v~~~~~~~~~~~l~~~~~----dg-----~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~--- 209 (321)
.|+ .-...++|+|+|.++++... .+ ..++|+-... ++...+ .....+...+.++
T Consensus 216 ~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~l-p~~~k~~lavr~~pVy 294 (434)
T KOG1009|consen 216 REGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARL-PSPKKPALAVRFSPVY 294 (434)
T ss_pred CCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeec-CCCCcceEEEEeeeeE
Confidence 011 12346789999998887532 22 2344432211 111111 1111112222222
Q ss_pred ---------------cCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 210 ---------------PNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 210 ---------------~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
|-+..+++++. +.+.+||.++..++.....-.- ..++-..+.+||..|+..+.||...+..+
T Consensus 295 ~elrp~~~~~~~~~lpyrlvfaiAt~-~svyvydtq~~~P~~~v~nihy--~~iTDiaws~dg~~l~vSS~DGyCS~vtf 371 (434)
T KOG1009|consen 295 YELRPLSSEKFLFVLPYRLVFAIATK-NSVYVYDTQTLEPLAVVDNIHY--SAITDIAWSDDGSVLLVSSTDGFCSLVTF 371 (434)
T ss_pred EEeccccccccccccccceEEEEeec-ceEEEeccccccceEEEeeeee--eeecceeecCCCcEEEEeccCCceEEEEE
Confidence 33444555554 5699999988777765543211 12333344578999999999999888777
Q ss_pred ccceE
Q 020798 275 QSRKV 279 (321)
Q Consensus 275 ~~~~~ 279 (321)
+..++
T Consensus 372 e~~el 376 (434)
T KOG1009|consen 372 EPWEL 376 (434)
T ss_pred cchhc
Confidence 66554
No 183
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=1.4e-18 Score=154.97 Aligned_cols=261 Identities=15% Similarity=0.206 Sum_probs=182.2
Q ss_pred eeeeeccCCcccEEEEEECCC-CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
.++.+|..|...|..++.+++ +.++++||.||+|++|++.+..... .......++..-...+..+...+.+..+|.++
T Consensus 1039 ~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~-~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t 1117 (1431)
T KOG1240|consen 1039 ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEG-GSARSELTYSPEGSRVEKVTMCGNGDQFAVST 1117 (1431)
T ss_pred eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCc-ceeeeeEEEeccCCceEEEEeccCCCeEEEEc
Confidence 467788899999999998864 5999999999999999998765532 11222333333456788999999999999999
Q ss_pred CCCcEEEEecCCcce-------eeeeecC--cccEEEEEECC-CCC-EEEEeeCCCcEEEEecCCCEEEEEE--eCCCCC
Q 020798 93 DDKTIRLWDVPTATC-------LKTLIGH--TNYVFCVNFNP-QSN-MIVSGAFDETVRIWDVKTGKCLKVL--PAHSDP 159 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~-------~~~~~~~--~~~v~~~~~~~-~~~-~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~~~ 159 (321)
.||.|++.+++-... ......+ ...+..-++.. ... .++.+..-+.|..||++.......+ +...+.
T Consensus 1118 ~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~ 1197 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGL 1197 (1431)
T ss_pred CCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccc
Confidence 999999998865211 1111112 22233333332 233 6777888889999999876543322 234468
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC---CCEEEEEe--cCCeEEEEeCCCCcE
Q 020798 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN---GKFILVGT--LDNTLRLWNYSTGKI 234 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~l~~~~--~d~~i~i~d~~~~~~ 234 (321)
|++++.+|.+..++.|+..|.+.+||++-+..+..+......++..+..+|- ....++++ ..+.|.+|++.+|..
T Consensus 1198 vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~ 1277 (1431)
T KOG1240|consen 1198 VTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR 1277 (1431)
T ss_pred eeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcc
Confidence 9999999999999999999999999999888888877677777888777763 34555544 467899999988755
Q ss_pred EEEEecc-CC---------------ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 235 LKTYTGH-TN---------------SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 235 ~~~~~~~-~~---------------~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
...+-.. .. ...+...+.....+..+.+|++|..||.||..
T Consensus 1278 ~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1278 QTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred eEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCC
Confidence 4444222 00 00111122222346688999999999999863
No 184
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.84 E-value=2e-18 Score=131.30 Aligned_cols=245 Identities=22% Similarity=0.357 Sum_probs=177.3
Q ss_pred ccccccccEEEEEECCCCC-EEEEEeCC-------CcEEEEecCCcce---------eeeee-cCcccEEEEEECCCCCE
Q 020798 68 KFTGHEQGVSDLVFSSDSR-FLVSASDD-------KTIRLWDVPTATC---------LKTLI-GHTNYVFCVNFNPQSNM 129 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~~-~l~~~~~d-------~~i~iwd~~~~~~---------~~~~~-~~~~~v~~~~~~~~~~~ 129 (321)
.|..|.+.|..++-+|..+ .|+++-.+ ..+.||.++.... +..+. .+-+.+.|+.|.|++..
T Consensus 58 vf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~k 137 (370)
T KOG1007|consen 58 VFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDK 137 (370)
T ss_pred hhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCe
Confidence 4556778899999999654 45554332 2478998865321 22222 23457899999999998
Q ss_pred EEEeeCCCcEEEEecCCCEE-EEEEe-----CCCCCeeEEEEcc--CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCC
Q 020798 130 IVSGAFDETVRIWDVKTGKC-LKVLP-----AHSDPVTAVDFNR--DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENP 201 (321)
Q Consensus 130 l~~~~~dg~i~~wd~~~~~~-~~~~~-----~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 201 (321)
+++-. |..|.+|++..+.. ...+. .+....++-+|+| +++.++ ...|+++..||+++-++...+...+..
T Consensus 138 lasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~-tt~d~tl~~~D~RT~~~~~sI~dAHgq 215 (370)
T KOG1007|consen 138 LASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVA-TTSDSTLQFWDLRTMKKNNSIEDAHGQ 215 (370)
T ss_pred eEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEE-EeCCCcEEEEEccchhhhcchhhhhcc
Confidence 88765 88999999987654 33332 2455678889999 455554 556789999999988777777777888
Q ss_pred CeEEEEEccCCCE-EEEEecCCeEEEEeCCCC-cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc--
Q 020798 202 PVSFVKFSPNGKF-ILVGTLDNTLRLWNYSTG-KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR-- 277 (321)
Q Consensus 202 ~~~~~~~~~~g~~-l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-- 277 (321)
.+..+.|+|+.++ |++++.||.|++||.+.. .++..+.+|..-++++. |.+...+++++|++|..|.+|-+.+-
T Consensus 216 ~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VR--fn~~hdqLiLs~~SDs~V~Lsca~svSS 293 (370)
T KOG1007|consen 216 RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVR--FNPEHDQLILSGGSDSAVNLSCASSVSS 293 (370)
T ss_pred eeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEE--ecCccceEEEecCCCceeEEEecccccc
Confidence 8999999998765 567888999999999865 46788888877666654 44556789999999999999865210
Q ss_pred ---------------------------eEEEEecCCCCCeEEEEecCCCce-EEEEeecCCccEEEccc
Q 020798 278 ---------------------------KVVQKLEGHTDPVISVASHPTENI-IASGALDNDRTVKIWTQ 318 (321)
Q Consensus 278 ---------------------------~~~~~~~~h~~~v~~~~~~p~~~~-l~s~~~d~~~~i~iw~~ 318 (321)
.++.++..|.+.|.+++|+.-..+ +|+-|.| |++.|=..
T Consensus 294 E~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYD--GRviIs~V 360 (370)
T KOG1007|consen 294 EQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYD--GRVIISSV 360 (370)
T ss_pred ccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccC--ceEEeecC
Confidence 124467789999999999877665 5666654 77766443
No 185
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.84 E-value=3.8e-19 Score=145.89 Aligned_cols=187 Identities=23% Similarity=0.323 Sum_probs=146.5
Q ss_pred eeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
.+...+|.+++.+-+|+|||.-|+++++||.|++|...++.+ ..+.....+|+|++|.|+.+.++.+ ..+
T Consensus 97 E~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLR---------Stl~Q~~~~v~c~~W~p~S~~vl~c-~g~ 166 (737)
T KOG1524|consen 97 ERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLR---------STVVQNEESIRCARWAPNSNSIVFC-QGG 166 (737)
T ss_pred hhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHH---------HHHhhcCceeEEEEECCCCCceEEe-cCC
Confidence 345678999999999999999999999999999998766543 2233345789999999988766544 334
Q ss_pred cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 96 TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
.+.|=.+..+..+-..++|.+.|.++.|++..+.+++|+.|-..++||-. |+.+..-..|+-+|++++|+|+ +.++.+
T Consensus 167 h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~ 244 (737)
T KOG1524|consen 167 HISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLW 244 (737)
T ss_pred eEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc-cceeee
Confidence 56666666665566788999999999999999999999999999999965 6666666789999999999999 566665
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
+.+ +.++ .......+..++|++||..+++|+..|.+.+=
T Consensus 245 S~n-t~R~------------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A 283 (737)
T KOG1524|consen 245 SYN-TARF------------SSPRVGSIFNLSWSADGTQATCGTSTGQLIVA 283 (737)
T ss_pred eee-eeee------------cCCCccceEEEEEcCCCceeeccccCceEEEe
Confidence 543 3331 12233457889999999999999998876543
No 186
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.83 E-value=5.7e-21 Score=163.83 Aligned_cols=241 Identities=28% Similarity=0.504 Sum_probs=187.9
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
+..+.+|...|+|..|...|+++++|++|..++||.+++..++....||.+.++.++.+.++.++++++.|..|++|.+.
T Consensus 183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~ 262 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP 262 (1113)
T ss_pred HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence 34567899999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred CCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC-Cce--eeeeccCCCCCeEEEEEccCCCEEEEEecCC
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST-GHC--MKTLIDDENPPVSFVKFSPNGKFILVGTLDN 222 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~ 222 (321)
.+.++..+.+|.+.|++++|+|-. +.+.||++++||.+- ... ..........-+..+.|...+.-+++++.|+
T Consensus 263 ~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ 338 (1113)
T KOG0644|consen 263 DGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDG 338 (1113)
T ss_pred CCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCc
Confidence 999999999999999999999954 778999999999871 110 0001111223355667777888889999998
Q ss_pred eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceE
Q 020798 223 TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENII 302 (321)
Q Consensus 223 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 302 (321)
.-..|...... .+......+ ........+.+++-.+-.+.+|++.++.+.+.+.+|..++.-+.+||-...+
T Consensus 339 ea~n~e~~~l~------~~~~~lif~--t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri 410 (1113)
T KOG0644|consen 339 EARNHEFEQLA------WRSNLLIFV--TRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRI 410 (1113)
T ss_pred ccccchhhHhh------hhccceEEE--eccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHh
Confidence 88777653211 111111001 1111122455666777889999999999999999999999999999988665
Q ss_pred EEEeecCCccEEEcccc
Q 020798 303 ASGALDNDRTVKIWTQE 319 (321)
Q Consensus 303 ~s~~~d~~~~i~iw~~~ 319 (321)
+-. ...||...|||.-
T Consensus 411 ~ms-ag~dgst~iwdi~ 426 (1113)
T KOG0644|consen 411 AMS-AGYDGSTIIWDIW 426 (1113)
T ss_pred hhh-ccCCCceEeeecc
Confidence 542 2356899999974
No 187
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.83 E-value=3.7e-18 Score=131.60 Aligned_cols=207 Identities=20% Similarity=0.329 Sum_probs=164.7
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
--.++|+|.+|++|++.+|++-+...+.||..... ....+..++..|...|+.+.|+|..+.|++++.|..-++|
T Consensus 8 ~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~-----~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw 82 (361)
T KOG1523|consen 8 RLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGA-----DLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVW 82 (361)
T ss_pred eccCceeeeeecCCCceEEeccCCceEEEEEecCC-----CCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccc
Confidence 34679999999999999999999999999976532 2245677889999999999999999999999999999999
Q ss_pred ecCC-cc--eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEE----EEEeCCCCCeeEEEEccCCCEEE
Q 020798 101 DVPT-AT--CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL----KVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 101 d~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
.... ++ ....+..++..+.++.|+|.++.|++|+....|.+|-.+..+.- ..-+.+...|++++|+|++-+++
T Consensus 83 ~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLla 162 (361)
T KOG1523|consen 83 TQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLA 162 (361)
T ss_pred ccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceec
Confidence 9843 32 33445678889999999999999999999999999877654321 11233567789999999999999
Q ss_pred EEeCCCeEEEEeC-----CC-------------CceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc
Q 020798 174 TSSYDGLCRIWDA-----ST-------------GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233 (321)
Q Consensus 174 ~~~~dg~i~~~d~-----~~-------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~ 233 (321)
+|+.|+.+++|.. +. |+.+.+. ......+..+.|+|+|..|+-.+.|..+.+-|.....
T Consensus 163 aGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~-~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 163 AGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEA-SSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred ccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhh-ccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 9999999999863 11 0111111 1334567889999999999999999999999976653
No 188
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=1.5e-18 Score=138.40 Aligned_cols=189 Identities=24% Similarity=0.341 Sum_probs=140.8
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec-c
Q 020798 119 FCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI-D 197 (321)
Q Consensus 119 ~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~ 197 (321)
.+++++++|..+++++.||++|+|+..+...+.....|...|.++.|+||+.+|++.+.| ..+||+.+++..+.... .
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 678999999999999999999999977777777778899999999999999999999999 89999999986555443 2
Q ss_pred CCCCCeEEEEEccCC---CEEEEE--ecCCeEEEEeCCCCcE---EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeE
Q 020798 198 DENPPVSFVKFSPNG---KFILVG--TLDNTLRLWNYSTGKI---LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCV 269 (321)
Q Consensus 198 ~~~~~~~~~~~~~~g---~~l~~~--~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 269 (321)
..+.....+.|+.++ .+++.+ ...+.|+.||+...+. ++..+. ......+++....++|+++|.|+.||.|
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~-~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKK-IKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhh-hhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 223345567777665 333222 2345666666543221 111110 0111135555566899999999999999
Q ss_pred EEEEcccceEEEEe-cCCCCCeEEEEecCCCceEEEEeecC
Q 020798 270 YLWELQSRKVVQKL-EGHTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 270 ~vwd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
.|++..+-+.++-. +.|...|+++.|+|+.+++++-+.|.
T Consensus 306 ai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~ 346 (398)
T KOG0771|consen 306 AIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDN 346 (398)
T ss_pred EEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCC
Confidence 99999887776655 46999999999999999999988664
No 189
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.82 E-value=3.3e-18 Score=147.29 Aligned_cols=234 Identities=17% Similarity=0.163 Sum_probs=159.8
Q ss_pred CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC---CcEEEEecCCcce--eeeeecCcccE
Q 020798 44 DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD---KTIRLWDVPTATC--LKTLIGHTNYV 118 (321)
Q Consensus 44 d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~--~~~~~~~~~~v 118 (321)
+..+.+||..... .+.+..|...+....|+|+|+.|+.++.+ ..|++||+.+++. +....++ .
T Consensus 183 ~~~i~i~d~dg~~---------~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~ 250 (429)
T PRK01742 183 PYEVRVADYDGFN---------QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---N 250 (429)
T ss_pred eEEEEEECCCCCC---------ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---c
Confidence 4678888764321 23456677789999999999999877644 3699999987753 2223333 3
Q ss_pred EEEEECCCCCEEEEee-CCCcEEE--EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe-CCCeEEEEeCCCCceeee
Q 020798 119 FCVNFNPQSNMIVSGA-FDETVRI--WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS-YDGLCRIWDASTGHCMKT 194 (321)
Q Consensus 119 ~~~~~~~~~~~l~~~~-~dg~i~~--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~ 194 (321)
...+|+|||+.|+.+. .+|.+.+ ||+.+++. ..+..+...+....|+|+|+.++.++ .++...+|++........
T Consensus 251 ~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~ 329 (429)
T PRK01742 251 GAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGAS 329 (429)
T ss_pred CceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeE
Confidence 4679999999887764 6776555 56665553 44555666788899999999777655 577788887643211112
Q ss_pred eccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 195 ~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
.... .. ....|+|+|++|+..+.++ +.+||+.+++.......... . ...+.++|++|+.++.++.+.+|++
T Consensus 330 ~l~~-~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~~--~---~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 330 LVGG-RG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTFLD--E---SPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred EecC-CC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCCCC--C---CceECCCCCEEEEEEcCCCceEEEE
Confidence 2221 11 3467999999998877655 66699988865432222111 1 1223579999999998998888876
Q ss_pred c--cceEEEEecCCCCCeEEEEecCCC
Q 020798 275 Q--SRKVVQKLEGHTDPVISVASHPTE 299 (321)
Q Consensus 275 ~--~~~~~~~~~~h~~~v~~~~~~p~~ 299 (321)
. +++.+.++.+|.+.+...+|+|.-
T Consensus 401 ~~~~G~~~~~l~~~~g~~~~p~wsp~~ 427 (429)
T PRK01742 401 VSADGRFKARLPGSDGQVKFPAWSPYL 427 (429)
T ss_pred EECCCCceEEccCCCCCCCCcccCCCC
Confidence 3 577788888888889999999863
No 190
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=3.4e-17 Score=121.87 Aligned_cols=241 Identities=19% Similarity=0.266 Sum_probs=163.5
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccc--cccc-----cccEEEEEECCCCCEEEE
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQK--FTGH-----EQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~--~~~h-----~~~i~~~~~~~~~~~l~~ 90 (321)
..++|.++|+.++|. ...|++|+ ||.|+-|...++..... .+++.. .+-| -..|+++...|..+-++.
T Consensus 57 ~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~--~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~ 131 (325)
T KOG0649|consen 57 PEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLA--TKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILF 131 (325)
T ss_pred eccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhcc--chhhhhhcCccccCcccCCccceeEeccCCCcEEE
Confidence 347999999999998 45677776 69999997765432111 111111 1112 235889999998777777
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCC----------Ce
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD----------PV 160 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~----------~v 160 (321)
++.|+.++-||+++++....+++|++++.++..-.....+++|+.||++|+||.++++.++.+..... .|
T Consensus 132 AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wi 211 (325)
T KOG0649|consen 132 AGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWI 211 (325)
T ss_pred ecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCcee
Confidence 88999999999999999999999999999998866667899999999999999999998877643221 23
Q ss_pred eEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 020798 161 TAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 161 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 240 (321)
.+++ -+...+++| ....+.+|.++..++...+. ...++..+.|..+ .+++++..+.+.-|.+. |.+....+.
T Consensus 212 gala--~~edWlvCG-gGp~lslwhLrsse~t~vfp--ipa~v~~v~F~~d--~vl~~G~g~~v~~~~l~-Gvl~a~ip~ 283 (325)
T KOG0649|consen 212 GALA--VNEDWLVCG-GGPKLSLWHLRSSESTCVFP--IPARVHLVDFVDD--CVLIGGEGNHVQSYTLN-GVLQANIPV 283 (325)
T ss_pred EEEe--ccCceEEec-CCCceeEEeccCCCceEEEe--cccceeEeeeecc--eEEEeccccceeeeeec-cEEEEeccC
Confidence 3443 345566544 45678999999887766653 2345666777544 67778877888888764 333333332
Q ss_pred cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEE
Q 020798 241 HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd 273 (321)
.. ..|....+....-+++-.++....+.|+.
T Consensus 284 ~s--~~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 284 ES--TACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred Cc--cceeeecccCCceEEEEecccceeeeeee
Confidence 22 22333333222245555556666666553
No 191
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.82 E-value=8.6e-17 Score=134.42 Aligned_cols=241 Identities=12% Similarity=0.207 Sum_probs=153.7
Q ss_pred cccEEEEEECCCCCEEEEe-cCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-CCcEEEE
Q 020798 23 LRAISSVKFSHDGRLLASS-SADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-DKTIRLW 100 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-d~~i~iw 100 (321)
.+....++++|++++|+++ ..++.+.+|++..... ........ .......++++|++++|++++. ++.|.+|
T Consensus 34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~-----l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~ 107 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGA-----LTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVS 107 (330)
T ss_pred CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCc-----eEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEE
Confidence 4567788999999988765 4578888898752100 00111111 1234578999999998887764 7899999
Q ss_pred ecCCcc----eeeeeecCcccEEEEEECCCCCEEEEe-eCCCcEEEEecCCCEEEE-------EEeCCCCCeeEEEEccC
Q 020798 101 DVPTAT----CLKTLIGHTNYVFCVNFNPQSNMIVSG-AFDETVRIWDVKTGKCLK-------VLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 101 d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~-------~~~~~~~~v~~~~~~~~ 168 (321)
++.+.. ....+. +......++++|++++++++ ..++.|.+||+.+...+. ... .......++|+|+
T Consensus 108 ~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pd 185 (330)
T PRK11028 108 PLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPN 185 (330)
T ss_pred EECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCC
Confidence 986432 122222 23346778899999988654 466999999997632221 111 1234567999999
Q ss_pred CCEEEEEeC-CCeEEEEeCCC--Cc--eeeeecc--C---CCCCeEEEEEccCCCEEEEEec-CCeEEEEeCCCCc----
Q 020798 169 GTMIVTSSY-DGLCRIWDAST--GH--CMKTLID--D---ENPPVSFVKFSPNGKFILVGTL-DNTLRLWNYSTGK---- 233 (321)
Q Consensus 169 ~~~l~~~~~-dg~i~~~d~~~--~~--~~~~~~~--~---~~~~~~~~~~~~~g~~l~~~~~-d~~i~i~d~~~~~---- 233 (321)
+++++++.. ++.|.+||+.. +. ....+.. . .......+.++|+|++++++.. ++.|.+|++....
T Consensus 186 g~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~ 265 (330)
T PRK11028 186 QQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLS 265 (330)
T ss_pred CCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEE
Confidence 999887765 89999999873 22 1222211 0 1111235889999999998854 7899999985432
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCC-CCeEEEEEcc
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE-DSCVYLWELQ 275 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~vwd~~ 275 (321)
.+........+ . .....++|++|++++. +++|.+|++.
T Consensus 266 ~~~~~~~~~~p-~---~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 266 FEGHQPTETQP-R---GFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred EeEEEeccccC-C---ceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 22222211111 1 1233468888887664 8999999875
No 192
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.81 E-value=1.3e-18 Score=138.66 Aligned_cols=195 Identities=23% Similarity=0.338 Sum_probs=150.2
Q ss_pred EEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc
Q 020798 27 SSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT 106 (321)
Q Consensus 27 ~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 106 (321)
.+++|+++|..|++|+.||.+++|+.. ...++.....|.+.|.++.|+|||++|++-+.| ..+||+..++.
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~P--------s~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~ 218 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWP--------SMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGA 218 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecC--------cchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCc
Confidence 578999999999999999999999643 334566677899999999999999999999999 89999999886
Q ss_pred eeeeee--cCcccEEEEEECCCC---CE--EEEeeCCCcEEEEecCCCEE-----EEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 107 CLKTLI--GHTNYVFCVNFNPQS---NM--IVSGAFDETVRIWDVKTGKC-----LKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 107 ~~~~~~--~~~~~v~~~~~~~~~---~~--l~~~~~dg~i~~wd~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
.+.... ........+.|+.++ .+ ++.....+.|+.||+....- ..........|++++.+++|++++.
T Consensus 219 ~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~Al 298 (398)
T KOG0771|consen 219 ALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLAL 298 (398)
T ss_pred hhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEE
Confidence 554432 223345567777766 32 23334456677776532111 1111122346899999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
|+.+|.|.+++..+-+........|...|+.+.|+|+.++++..+.+..+.+..+.
T Consensus 299 GT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 299 GTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred eccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 99999999999988777777777788889999999999999998888888877654
No 193
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.80 E-value=2.3e-16 Score=124.02 Aligned_cols=235 Identities=14% Similarity=0.189 Sum_probs=169.2
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEee--CCCcEEEEecCCCEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA--FDETVRIWDVKTGKCLK 151 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~ 151 (321)
..+..+.|+.+...|..|+.|| .++|+................|.-+-|+. ..++..+ ....+++++++.+..+.
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~~IC 82 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKTTIC 82 (391)
T ss_pred cceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCceEE
Confidence 3466677999998899999988 67787765433211111223344444554 3444333 33458999998887776
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC--CCCCeEEEEEccCCCEEEEEe--cCCeEEEE
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD--ENPPVSFVKFSPNGKFILVGT--LDNTLRLW 227 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~--~d~~i~i~ 227 (321)
.+. ...+|.++.++.+ .|+++-.+. |++||+++-+.+.++..- ....+..+.+++.+.+++.-+ ..|.|.+|
T Consensus 83 e~~-fpt~IL~VrmNr~--RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~ 158 (391)
T KOG2110|consen 83 EIF-FPTSILAVRMNRK--RLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLF 158 (391)
T ss_pred EEe-cCCceEEEEEccc--eEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEE
Confidence 654 3567888888754 566666655 999999987777766443 222344455555666887643 46899999
Q ss_pred eCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCe-EEEEEcccceEEEEecCCC--CCeEEEEecCCCceEEE
Q 020798 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSC-VYLWELQSRKVVQKLEGHT--DPVISVASHPTENIIAS 304 (321)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~s 304 (321)
|+.+-+.+..+..|.++..++ ...++|.+|||++..|+ ||||.+.+++.+.+++--. ..|.+++|+|++.+|++
T Consensus 159 d~~nl~~v~~I~aH~~~lAal---afs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~ 235 (391)
T KOG2110|consen 159 DTINLQPVNTINAHKGPLAAL---AFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAA 235 (391)
T ss_pred EcccceeeeEEEecCCceeEE---EECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEE
Confidence 999999999999998876554 44589999999999997 6999999999988876433 46889999999999998
Q ss_pred EeecCCccEEEccccc
Q 020798 305 GALDNDRTVKIWTQEK 320 (321)
Q Consensus 305 ~~~d~~~~i~iw~~~~ 320 (321)
.| +.++|.|+.+++
T Consensus 236 sS--~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 236 SS--NTETVHIFKLEK 249 (391)
T ss_pred ec--CCCeEEEEEecc
Confidence 87 568999998875
No 194
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.80 E-value=8.9e-17 Score=139.16 Aligned_cols=300 Identities=19% Similarity=0.285 Sum_probs=205.6
Q ss_pred eeeccCCcccEEEEEECCCCC---EEEEecCCceEEEeeccccCCCCCC---------------------------CCC-
Q 020798 16 TQTLNGHLRAISSVKFSHDGR---LLASSSADKTLLTYSLSSISNSDST---------------------------PPS- 64 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~---~l~~~~~d~~v~~~~~~~~~~~~~~---------------------------~~~- 64 (321)
.+.|.+|..+++.+.+.|... ++.+++.||.|++|+.....-.... ...
T Consensus 50 i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~ 129 (792)
T KOG1963|consen 50 ITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSI 129 (792)
T ss_pred hhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeeccccee
Confidence 346789999999999988654 6789999999999987543200000 000
Q ss_pred -----------------------cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceee----eeecCccc
Q 020798 65 -----------------------PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK----TLIGHTNY 117 (321)
Q Consensus 65 -----------------------~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~----~~~~~~~~ 117 (321)
+...+..|.. -..+.+++.|.+.+..- +..+.+|+..+..... .-..|.-.
T Consensus 130 ~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~~~ge~~~i~~-~~~~~~~~v~~~~~~~~~~~~~~~Htf~ 207 (792)
T KOG1963|consen 130 LTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDNNSGEFKGIVH-MCKIHIYFVPKHTKHTSSRDITVHHTFN 207 (792)
T ss_pred eeecccccccceeeeEeeeccccchhhhhhhcC-CccEEEcCCceEEEEEE-eeeEEEEEecccceeeccchhhhhhccc
Confidence 0000011111 24566666666554443 3457788877644110 11346666
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEEecCC--C--EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceee
Q 020798 118 VFCVNFNPQSNMIVSGAFDETVRIWDVKT--G--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193 (321)
Q Consensus 118 v~~~~~~~~~~~l~~~~~dg~i~~wd~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 193 (321)
+.+.+++|++++++++..||.|.+|.--. + .....+.=|..+|++++|+++|.+|++|+..+.+.+|.+.+++ +
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--k 285 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--K 285 (792)
T ss_pred ceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC--c
Confidence 89999999999999999999999996322 1 1233455678899999999999999999999999999999877 5
Q ss_pred eeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc-------eeEE-EeEEEecCCeEEEEeCC
Q 020798 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS-------KYCI-SSTFSVTNGKYIVSGSE 265 (321)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~l~~~~~ 265 (321)
+++..-+.++..+.++||+.+.++...|+.|.+....+......+.+.... ..++ ......|..+.++-.+.
T Consensus 286 qfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~ 365 (792)
T KOG1963|consen 286 QFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGH 365 (792)
T ss_pred ccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCC
Confidence 566666788999999999999999999999999988766554444332211 1111 11122233455666788
Q ss_pred CCeEEEEEcccceEEEEec-----C------CCCCeEEEEecCCCceEEEEe--------ecCCccEEEcccc
Q 020798 266 DSCVYLWELQSRKVVQKLE-----G------HTDPVISVASHPTENIIASGA--------LDNDRTVKIWTQE 319 (321)
Q Consensus 266 dg~i~vwd~~~~~~~~~~~-----~------h~~~v~~~~~~p~~~~l~s~~--------~d~~~~i~iw~~~ 319 (321)
.|.|.+||+.+.+.+.++. . +...++.++.+-.|++++|.- .|+.-.+|+|..+
T Consensus 366 ~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n 438 (792)
T KOG1963|consen 366 PGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYN 438 (792)
T ss_pred CceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEc
Confidence 9999999998877665542 1 223578888888899999973 2333468888764
No 195
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.80 E-value=9.2e-17 Score=138.18 Aligned_cols=263 Identities=16% Similarity=0.186 Sum_probs=180.7
Q ss_pred ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeCCCcEEEEecCCcce--ee----eeecCccc
Q 020798 45 KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLWDVPTATC--LK----TLIGHTNY 117 (321)
Q Consensus 45 ~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~--~~----~~~~~~~~ 117 (321)
+.+.+|++... ..|...+. -...|.++.|+|. ..+++.|+.+|+|.+||+..+.. .. ....|..+
T Consensus 222 ~~~~vW~~~~p-------~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~ 293 (555)
T KOG1587|consen 222 GVLLVWSLKNP-------NTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEP 293 (555)
T ss_pred ceEEEEecCCC-------CCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcC
Confidence 35777776532 22323332 3467999999995 56788899999999999977653 11 22458889
Q ss_pred EEEEEECCCC--CEEEEeeCCCcEEEEecCCCEEE------EEEe------CCCCCeeEEEEccC-CCEEEEEeCCCeEE
Q 020798 118 VFCVNFNPQS--NMIVSGAFDETVRIWDVKTGKCL------KVLP------AHSDPVTAVDFNRD-GTMIVTSSYDGLCR 182 (321)
Q Consensus 118 v~~~~~~~~~--~~l~~~~~dg~i~~wd~~~~~~~------~~~~------~~~~~v~~~~~~~~-~~~l~~~~~dg~i~ 182 (321)
+..+.|..+. ..|++++.||.|..|+++.-... .... .....+++++|.+. -..|+.|+.+|.|.
T Consensus 294 v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~ 373 (555)
T KOG1587|consen 294 VTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVY 373 (555)
T ss_pred eEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEE
Confidence 9999986643 45999999999999987642211 0011 11245788999885 45789999999887
Q ss_pred EEe---CCCCc----eeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC-CCcEEEEEeccCCceeEEEeEEEe
Q 020798 183 IWD---ASTGH----CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS-TGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 183 ~~d---~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
--. .+... ........+..++..+.++|=+..++..+.|-.++||... ...++..+..+... .....|++
T Consensus 374 ~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~--v~~vaWSp 451 (555)
T KOG1587|consen 374 KGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDY--VTDVAWSP 451 (555)
T ss_pred EEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccce--eeeeEEcC
Confidence 632 22222 0111223455678999999987777666669999999976 55555555443332 33445666
Q ss_pred cCCeEEEEeCCCCeEEEEEcccc--eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQSR--KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.....++++..||.|.+||+... +.+...+-+....+.+.|++.|+.|+.|. ..|.+.+|++.
T Consensus 452 trpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd--~~G~~~~~~l~ 516 (555)
T KOG1587|consen 452 TRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGD--ANGTTHILKLS 516 (555)
T ss_pred cCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEec--CCCcEEEEEcC
Confidence 66788999999999999999654 33444444566778888999999999985 56899999873
No 196
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.79 E-value=2.6e-17 Score=125.41 Aligned_cols=242 Identities=20% Similarity=0.341 Sum_probs=170.4
Q ss_pred cEEEEEECC--C-CCEEEEEeC----CCcEEEEec--CCcceee-eeecCcccEEEEEECCCC-----CEEEEeeCCCcE
Q 020798 75 GVSDLVFSS--D-SRFLVSASD----DKTIRLWDV--PTATCLK-TLIGHTNYVFCVNFNPQS-----NMIVSGAFDETV 139 (321)
Q Consensus 75 ~i~~~~~~~--~-~~~l~~~~~----d~~i~iwd~--~~~~~~~-~~~~~~~~v~~~~~~~~~-----~~l~~~~~dg~i 139 (321)
.++++.|+. + +.+|+.|+- .+.|.|-.+ ++++.+. ....|.-+++.+.|.|+. ..|++++ ..+
T Consensus 46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~L 123 (364)
T KOG0290|consen 46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--DFL 123 (364)
T ss_pred ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--CeE
Confidence 467788873 3 346777763 345666544 3333322 224677889999999975 3455544 579
Q ss_pred EEEecCCCEE----EEE-----EeCCCCCeeEEEEcc-CCCEEEEEeCCCeEEEEeCCCCce--eeeeccCCCCCeEEEE
Q 020798 140 RIWDVKTGKC----LKV-----LPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTGHC--MKTLIDDENPPVSFVK 207 (321)
Q Consensus 140 ~~wd~~~~~~----~~~-----~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~~~~~~~ 207 (321)
|+|.+...+. ... -..+..+++++.|+. +-+++.+++-|-++.+||+.++.. +++.+-.|...|..++
T Consensus 124 RlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIa 203 (364)
T KOG0290|consen 124 RLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIA 203 (364)
T ss_pred EEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEE
Confidence 9998863211 111 123567899999986 456788999999999999998633 5566667888899999
Q ss_pred EccCC-CEEEEEecCCeEEEEeCCCCcEEEE-EeccCCceeEEEeEEEecCCeEEEEeCCC-CeEEEEEcccc-eEEEEe
Q 020798 208 FSPNG-KFILVGTLDNTLRLWNYSTGKILKT-YTGHTNSKYCISSTFSVTNGKYIVSGSED-SCVYLWELQSR-KVVQKL 283 (321)
Q Consensus 208 ~~~~g-~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~-~~~~~~ 283 (321)
|...+ +.+++.+.||.+|+||++..+.-.. ++.......-+...+...|-.++|+-..| ..|.+.|++.. ..+.++
T Consensus 204 f~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L 283 (364)
T KOG0290|consen 204 FLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARL 283 (364)
T ss_pred eccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehh
Confidence 99865 4677889999999999987654333 23222122334555666777888876554 46889999876 457889
Q ss_pred cCCCCCeEEEEecCCC-ceEEEEeecCCccEEEccccc
Q 020798 284 EGHTDPVISVASHPTE-NIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 284 ~~h~~~v~~~~~~p~~-~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.+|...|++++|.|.. ..|.++| +|..+.|||+..
T Consensus 284 ~~H~a~VNgIaWaPhS~~hictaG--DD~qaliWDl~q 319 (364)
T KOG0290|consen 284 RNHQASVNGIAWAPHSSSHICTAG--DDCQALIWDLQQ 319 (364)
T ss_pred hcCcccccceEecCCCCceeeecC--CcceEEEEeccc
Confidence 9999999999999985 6788887 458899999853
No 197
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.79 E-value=2.4e-17 Score=135.46 Aligned_cols=269 Identities=14% Similarity=0.180 Sum_probs=179.1
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRL 99 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~i 99 (321)
+.|.+-|-|+.|+.+...+.+++.+..++.|++..........+...-...-|-.+ .+..=-.....|+.++.||.+.+
T Consensus 11 ~r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~-rs~~~g~~~d~~~i~s~DGkf~i 89 (737)
T KOG1524|consen 11 NRNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGG-RSSGGGKGSDTLLICSNDGRFVI 89 (737)
T ss_pred cccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccc-cccCCCCCcceEEEEcCCceEEE
Confidence 35777788999998888888887776666666654221111000000000011000 00000012346888899999998
Q ss_pred EecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC
Q 020798 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179 (321)
Q Consensus 100 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 179 (321)
.+ ..++..+.+.+|.+.+.+-.|+|+|.-|++++.||.|++|. ++|-...++.....+|.+++|.|+.+.++.+.. +
T Consensus 90 l~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~ 166 (737)
T KOG1524|consen 90 LN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-G 166 (737)
T ss_pred ec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecC-C
Confidence 87 34556677889999999999999999999999999999998 567666666667789999999999876655543 4
Q ss_pred eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeE
Q 020798 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259 (321)
Q Consensus 180 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (321)
.+.+=.+.....+-++ ..|...+.++.|++..+.+++|+.|...++||.. |..+..-..|..+ +++..+.|+ ..
T Consensus 167 h~~IKpL~~n~k~i~W-kAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~---ITSva~npd-~~ 240 (737)
T KOG1524|consen 167 HISIKPLAANSKIIRW-RAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYA---ITSVAFNPE-KD 240 (737)
T ss_pred eEEEeecccccceeEE-eccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccc---eeeeeeccc-cc
Confidence 4555555443333333 3567778999999999999999999999999954 4455444444444 444444455 44
Q ss_pred EEEeCCCCeEEEEEcccceEEEEec-CCCCCeEEEEecCCCceEEEEeecCCccE
Q 020798 260 IVSGSEDSCVYLWELQSRKVVQKLE-GHTDPVISVASHPTENIIASGALDNDRTV 313 (321)
Q Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~~~d~~~~i 313 (321)
++.++. .++| +. ...+.|..++|+|||..++.|. +.|.+
T Consensus 241 ~~v~S~-nt~R------------~~~p~~GSifnlsWS~DGTQ~a~gt--~~G~v 280 (737)
T KOG1524|consen 241 YLLWSY-NTAR------------FSSPRVGSIFNLSWSADGTQATCGT--STGQL 280 (737)
T ss_pred eeeeee-eeee------------ecCCCccceEEEEEcCCCceeeccc--cCceE
Confidence 554443 2333 22 2356899999999999999886 34544
No 198
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=2.2e-18 Score=141.83 Aligned_cols=211 Identities=22% Similarity=0.373 Sum_probs=156.9
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcc-cccccccccEEEEEECCC--CCEEEE
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPL-QKFTGHEQGVSDLVFSSD--SRFLVS 90 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~-~~~~~h~~~i~~~~~~~~--~~~l~~ 90 (321)
.+.+.|.||.+-|.|++|+.+|.+|++||.|-.+.+||.... +++ ..-++|.+.|.++.|-|. .+.+++
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~--------KllhsI~TgHtaNIFsvKFvP~tnnriv~s 112 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEY--------KLLHSISTGHTANIFSVKFVPYTNNRIVLS 112 (758)
T ss_pred chhhhhccccceecceeecCCCCEEeecCCcceEEeecchhc--------ceeeeeecccccceeEEeeeccCCCeEEEe
Confidence 355778999999999999999999999999999999986532 122 234689999999999984 568899
Q ss_pred EeCCCcEEEEecCCc----------ceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEE-EEEEeC---
Q 020798 91 ASDDKTIRLWDVPTA----------TCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKC-LKVLPA--- 155 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~----------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~-~~~~~~--- 155 (321)
|..|..|+++|+... +....+..|...|..++..|++ +.+.+++.||+|+-+|++.... ......
T Consensus 113 gAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~ 192 (758)
T KOG1310|consen 113 GAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSI 192 (758)
T ss_pred ccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHH
Confidence 999999999999742 2234456788999999999988 8899999999999999986421 111101
Q ss_pred ------CCCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCC--------Cc----------eeeeeccCCC----------
Q 020798 156 ------HSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDAST--------GH----------CMKTLIDDEN---------- 200 (321)
Q Consensus 156 ------~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~--------~~----------~~~~~~~~~~---------- 200 (321)
.--...++..+|... +|++|+.|-..++||.+. +. ++..+...+-
T Consensus 193 l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~ 272 (758)
T KOG1310|consen 193 LVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRY 272 (758)
T ss_pred HHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccc
Confidence 112356788898754 788899999999999431 10 1111111110
Q ss_pred -CCeEEEEEccCCCEEEEEecCCeEEEEeCCCC
Q 020798 201 -PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 201 -~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~ 232 (321)
...+.+.|+|+|..|++.-....|+++|+..+
T Consensus 273 ~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~ 305 (758)
T KOG1310|consen 273 ITCCTYVTFNPNGTELLVSWGGEHVYLFDVNED 305 (758)
T ss_pred eeeeEEEEECCCCcEEEEeeCCeEEEEEeecCC
Confidence 12567899999999988777778999998654
No 199
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=7.5e-17 Score=142.20 Aligned_cols=244 Identities=19% Similarity=0.302 Sum_probs=172.3
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecC---cccEEEEEECC--CCCEEEEeeCCCcEEEEecC----
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGH---TNYVFCVNFNP--QSNMIVSGAFDETVRIWDVK---- 145 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~---- 145 (321)
....+.|+|-...++++...-.|++||.+.++.+..+..+ ...|+.+.+-. |...+++|+.||.|++|+--
T Consensus 1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence 3567889998888998887788999999999887665433 34577777643 44678999999999999742
Q ss_pred -CCEEEEEEeC-------CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEc-cCCCEEE
Q 020798 146 -TGKCLKVLPA-------HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFS-PNGKFIL 216 (321)
Q Consensus 146 -~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~l~ 216 (321)
+.+.+..+.. ..+.-.-++|.....+|++++.-..|++||.........+.......++.+.-+ +.|+.++
T Consensus 1146 ~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~ 1225 (1387)
T KOG1517|consen 1146 KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIA 1225 (1387)
T ss_pred CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEE
Confidence 2233332211 112224567877777788887788999999998877777665555566655433 3579999
Q ss_pred EEecCCeEEEEeCCCCc---EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEE--EEecCCC---C
Q 020798 217 VGTLDNTLRLWNYSTGK---ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV--QKLEGHT---D 288 (321)
Q Consensus 217 ~~~~d~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~h~---~ 288 (321)
+|..||.|++||.+... .+..+..|......+...+....-..|++|+.||.|++||++..... -.+..|- +
T Consensus 1226 AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs 1305 (1387)
T KOG1517|consen 1226 AGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGS 1305 (1387)
T ss_pred EeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCc
Confidence 99999999999987543 46666677655223333333322236999999999999999874221 2223332 3
Q ss_pred CeEEEEecCCCceEEEEeecCCccEEEcccccC
Q 020798 289 PVISVASHPTENIIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 289 ~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~~ 321 (321)
.++++..|++..++|+|+. +.|+||+...|
T Consensus 1306 ~lTal~VH~hapiiAsGs~---q~ikIy~~~G~ 1335 (1387)
T KOG1517|consen 1306 ALTALTVHEHAPIIASGSA---QLIKIYSLSGE 1335 (1387)
T ss_pred cceeeeeccCCCeeeecCc---ceEEEEecChh
Confidence 5999999999999999973 68999998653
No 200
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.78 E-value=1.6e-17 Score=126.51 Aligned_cols=205 Identities=19% Similarity=0.296 Sum_probs=153.7
Q ss_pred CCcccEEEEEECCCC-----CEEEEecCCceEEEeeccccCCCCCCCCCcccc-----cccccccEEEEEECC-CCCEEE
Q 020798 21 GHLRAISSVKFSHDG-----RLLASSSADKTLLTYSLSSISNSDSTPPSPLQK-----FTGHEQGVSDLVFSS-DSRFLV 89 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g-----~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~-----~~~h~~~i~~~~~~~-~~~~l~ 89 (321)
.|..+++.+-|.|+. .+||+++ ..+++|.+...+. +..+... -..+..++++..|+. +-+++.
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~----~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~ig 167 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEES----RVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIG 167 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCC----ceehhhhhccCcccccCCcccccccccCCcceeE
Confidence 688999999999986 3566654 5799998764321 1111111 123567899999986 567889
Q ss_pred EEeCCCcEEEEecCCcc---eeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEE---EEEEeCCCCCeeE
Q 020798 90 SASDDKTIRLWDVPTAT---CLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKC---LKVLPAHSDPVTA 162 (321)
Q Consensus 90 ~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~---~~~~~~~~~~v~~ 162 (321)
+++.|.+..|||++++. ....+.+|...|..++|...+ +.|++.+.||.+|+||++.-+- +..-+....+...
T Consensus 168 tSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlR 247 (364)
T KOG0290|consen 168 TSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLR 247 (364)
T ss_pred eecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCccee
Confidence 99999999999998863 355678999999999999865 4689999999999999986542 2222333567788
Q ss_pred EEEccCC-CEEEEEeC-CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC-CCEEEEEecCCeEEEEeCCC
Q 020798 163 VDFNRDG-TMIVTSSY-DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 163 ~~~~~~~-~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~ 231 (321)
++|+++. +++++-.. ...|.+.|++.......-+..|...|+.++|.|. ...|.+++.|.++.+||+..
T Consensus 248 LswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 248 LSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred eccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 9998854 45666444 4578899999765444445678889999999995 56788999999999999864
No 201
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.78 E-value=1.7e-16 Score=136.50 Aligned_cols=247 Identities=20% Similarity=0.244 Sum_probs=170.3
Q ss_pred cccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcc-cccccccccEEEEEECCCCCE--EEEEeCCCcEE
Q 020798 23 LRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPL-QKFTGHEQGVSDLVFSSDSRF--LVSASDDKTIR 98 (321)
Q Consensus 23 ~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~-~~~~~h~~~i~~~~~~~~~~~--l~~~~~d~~i~ 98 (321)
..+|+|+.|+| +..+++.|..+|.|.+||+....... ..++ .....|..++..+.|..+..- +++++.||.|.
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~---~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~ 318 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTP---PSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSIC 318 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCC---CcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEe
Confidence 56899999998 56788999999999999997643311 1111 223468899999999775444 89999999999
Q ss_pred EEecCCcce-e-----eeee------cCcccEEEEEECCC-CCEEEEeeCCCcEEEEecC---CCE-----EEEEEeCCC
Q 020798 99 LWDVPTATC-L-----KTLI------GHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVK---TGK-----CLKVLPAHS 157 (321)
Q Consensus 99 iwd~~~~~~-~-----~~~~------~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~---~~~-----~~~~~~~~~ 157 (321)
.|+++.-.. . .... .-...+++++|.+. .+.|+.|+..|.|..-.-. ... ....+..|.
T Consensus 319 ~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~ 398 (555)
T KOG1587|consen 319 SWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHI 398 (555)
T ss_pred eeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccC
Confidence 998754322 0 0001 11234778888774 4678999999998763322 211 123455788
Q ss_pred CCeeEEEEccCCCEEEEEeCCCeEEEEeCC-CCceeeeeccCCCCCeEEEEEccCCCE-EEEEecCCeEEEEeCCCCc--
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-TGHCMKTLIDDENPPVSFVKFSPNGKF-ILVGTLDNTLRLWNYSTGK-- 233 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~~~d~~i~i~d~~~~~-- 233 (321)
++|.++.++|=+..++..+.|-++++|.-. ...++.. ...+...+..++|+|.... ++++..||.|.+||+....
T Consensus 399 g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~-~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~ 477 (555)
T KOG1587|consen 399 GPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLS-LDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEE 477 (555)
T ss_pred cceEeeecCCCccceeeeeccceeEeccccCCCCcchh-hhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccC
Confidence 999999999987766655559999999876 3322222 2233344889999998755 5566779999999986533
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
++.+.... ...+...+..+.|+.|++|...|.+.+|++..
T Consensus 478 Pv~s~~~~---~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 478 PVLSQKVC---SPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred Cccccccc---ccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 33333222 12233445567799999999999999999853
No 202
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.78 E-value=1.2e-18 Score=140.53 Aligned_cols=264 Identities=18% Similarity=0.293 Sum_probs=196.4
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
+-+.+.|+.+|+.|+.|+..|.+-.+|.....- ...+ .-...|.++.|-.+.+++|++ ....+.|||- .
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L--------~~Ei-~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~-~ 199 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKL--------HFEI-NVMETVRDVTFLHNEQFFAVA-QKKYVYVYDN-N 199 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeeccccee--------eeee-ehhhhhhhhhhhcchHHHHhh-hhceEEEecC-C
Confidence 455789999999999999999999988754321 1111 113468889999988888766 5567999994 4
Q ss_pred cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEE
Q 020798 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184 (321)
Q Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 184 (321)
+..++.+..|. .+..+.|-|-.-.|++++..|.++.-|+.+|+.+..+....+.+..++-+|-+..+-+|...|+|.+|
T Consensus 200 GtElHClk~~~-~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlW 278 (545)
T KOG1272|consen 200 GTELHCLKRHI-RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLW 278 (545)
T ss_pred CcEEeehhhcC-chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEec
Confidence 55567766554 47789999988888999999999999999999988887778888899999999999999999999999
Q ss_pred eCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeC
Q 020798 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS 264 (321)
Q Consensus 185 d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (321)
.....+++..++ .+..+|..+++.++|+++++++.|..++|||++.-..+.++.... +...++ + ++ -. +++.+
T Consensus 279 SP~skePLvKiL-cH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~-~a~~ls--~-Sq-kg-lLA~~ 351 (545)
T KOG1272|consen 279 SPNSKEPLVKIL-CHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPH-PASNLS--L-SQ-KG-LLALS 351 (545)
T ss_pred CCCCcchHHHHH-hcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCC-Cccccc--c-cc-cc-ceeee
Confidence 998877666654 456789999999999999999999999999999876655554311 111121 1 12 22 34445
Q ss_pred CCCeEEEEEcc-c--ceEEEEecCC--CCCeEEEEecCCCceEEEEee
Q 020798 265 EDSCVYLWELQ-S--RKVVQKLEGH--TDPVISVASHPTENIIASGAL 307 (321)
Q Consensus 265 ~dg~i~vwd~~-~--~~~~~~~~~h--~~~v~~~~~~p~~~~l~s~~~ 307 (321)
....|.+|.-. . +.....+-.| ..+|.++.|.|.++.|-.|..
T Consensus 352 ~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~ 399 (545)
T KOG1272|consen 352 YGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHA 399 (545)
T ss_pred cCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeecccc
Confidence 55679999532 2 1222222233 358999999999888877653
No 203
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.76 E-value=1.5e-14 Score=121.07 Aligned_cols=275 Identities=17% Similarity=0.220 Sum_probs=175.4
Q ss_pred CEE-EEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecC
Q 020798 36 RLL-ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGH 114 (321)
Q Consensus 36 ~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 114 (321)
+++ ++-..++.+.+.|... .+.+..+......-..+.|+|||+++++++.||.|.++|+.+.+.+.++..-
T Consensus 6 ~l~~V~~~~~~~v~viD~~t--------~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G 77 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGAT--------NKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG 77 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT---------SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S
T ss_pred cEEEEEecCCCEEEEEECCC--------CeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC
Confidence 344 4456678888887643 2334455443333345789999999999999999999999999988887643
Q ss_pred cccEEEEEECCCCCEEEEee-CCCcEEEEecCCCEEEEEEeCC-------CCCeeEEEEccCCCEEEEEeC-CCeEEEEe
Q 020798 115 TNYVFCVNFNPQSNMIVSGA-FDETVRIWDVKTGKCLKVLPAH-------SDPVTAVDFNRDGTMIVTSSY-DGLCRIWD 185 (321)
Q Consensus 115 ~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~-dg~i~~~d 185 (321)
.....+++++||++++++. .++.+.++|.++.+.++.++.. ...+..+..+|....++..-. .+.|.+.|
T Consensus 78 -~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVd 156 (369)
T PF02239_consen 78 -GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVD 156 (369)
T ss_dssp -SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEE
T ss_pred -CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEE
Confidence 3467899999999987664 6899999999999888877543 345667777888886666655 47888888
Q ss_pred CCCCceeeeeccCCCCCeEEEEEccCCCEEEEE-ecCCeEEEEeCCCCcEEEEEec----c---------CCc--eeE--
Q 020798 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYSTGKILKTYTG----H---------TNS--KYC-- 247 (321)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~d~~i~i~d~~~~~~~~~~~~----~---------~~~--~~~-- 247 (321)
....+.................|+|++++++++ ..++.|-++|.++++.+..+.. | ... .+.
T Consensus 157 y~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~ 236 (369)
T PF02239_consen 157 YSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATS 236 (369)
T ss_dssp TTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEE
T ss_pred eccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeec
Confidence 776543332222234456678999999998775 4567899999888766544321 0 000 000
Q ss_pred ----------------------------E------EeEEEecCCeEEEEe----CCCCeEEEEEcccceEEEEecCC-CC
Q 020798 248 ----------------------------I------SSTFSVTNGKYIVSG----SEDSCVYLWELQSRKVVQKLEGH-TD 288 (321)
Q Consensus 248 ----------------------------~------~~~~~~~~~~~l~~~----~~dg~i~vwd~~~~~~~~~~~~h-~~ 288 (321)
+ .+....|+++++.+. ...+.|.++|.++.+.+..+... ..
T Consensus 237 ~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~ 316 (369)
T PF02239_consen 237 GLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGK 316 (369)
T ss_dssp BSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT-
T ss_pred cccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCC
Confidence 0 012234677777776 45589999999998887777532 23
Q ss_pred CeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 289 PVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 289 ~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+..+.|+++|+++-....+.++.|.+||.+
T Consensus 317 ~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~ 347 (369)
T PF02239_consen 317 RVVHMEFNPDGKEVWVSVWDGNGAIVVYDAK 347 (369)
T ss_dssp -EEEEEE-TTSSEEEEEEE--TTEEEEEETT
T ss_pred cEeccEECCCCCEEEEEEecCCCEEEEEECC
Confidence 5899999999998877777877799999874
No 204
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.76 E-value=1.4e-16 Score=126.31 Aligned_cols=248 Identities=19% Similarity=0.287 Sum_probs=174.0
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC------cceeeee-ecCcccEEEEEECCCCCEEEEeeCCCc
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT------ATCLKTL-IGHTNYVFCVNFNPQSNMIVSGAFDET 138 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~------~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~ 138 (321)
...+.+|.+.|.++.|+.++++|++|+.|..+++|+++. .+++... ..|...|+|++|+..+.++++|+.+++
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT 128 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcce
Confidence 345678999999999999999999999999999999753 2333322 235578999999999999999999999
Q ss_pred EEEEecCCCEEEEEEeC--CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCcee-ee-eccCCCCCeEEEEEccCCC-
Q 020798 139 VRIWDVKTGKCLKVLPA--HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM-KT-LIDDENPPVSFVKFSPNGK- 213 (321)
Q Consensus 139 i~~wd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~- 213 (321)
|...|+.+.+.+..+.. ..+.|..+..+|..+.|++.+.++.|.+||.+..+.. .. ...........+.|+|...
T Consensus 129 VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~ 208 (609)
T KOG4227|consen 129 VIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPA 208 (609)
T ss_pred eEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCce
Confidence 99999999887766532 2248999999999999999999999999999864421 11 1122234456678999654
Q ss_pred EEEEEecCCeEEEEeCCCCcE-EEEEeccCCc---e-eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEE-EEecCCC
Q 020798 214 FILVGTLDNTLRLWNYSTGKI-LKTYTGHTNS---K-YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV-QKLEGHT 287 (321)
Q Consensus 214 ~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~---~-~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~h~ 287 (321)
+|++.+..+-+.+||.+.... +..+.+..+. . --+...|. ++|..|++--....-.+||+.+.++. .+.. |.
T Consensus 209 Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~-~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D-~N 286 (609)
T KOG4227|consen 209 LILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWS-PSGNQFMSIRRGKCPLYFDFISQRCFVLKSD-HN 286 (609)
T ss_pred eEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeC-CCCCeehhhhccCCCEEeeeecccceeEecc-CC
Confidence 566777788899999876431 2111111111 0 01233343 56777776655556678898876543 2222 32
Q ss_pred -------CCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 288 -------DPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 288 -------~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
..+.+++|-.|.. +++||. +=.|++|.+
T Consensus 287 ~~GY~N~~T~KS~~F~~D~~-v~tGSD--~~~i~~Wkl 321 (609)
T KOG4227|consen 287 PNGYCNIKTIKSMTFIDDYT-VATGSD--HWGIHIWKL 321 (609)
T ss_pred CCcceeeeeeeeeeeeccee-eeccCc--ccceEEEec
Confidence 2577888875554 888873 356999986
No 205
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.76 E-value=2.7e-17 Score=135.51 Aligned_cols=216 Identities=25% Similarity=0.445 Sum_probs=156.4
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeee-ecCcccEEEEEECCC--CCEEEEeeCCCcEEE
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL-IGHTNYVFCVNFNPQ--SNMIVSGAFDETVRI 141 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~ 141 (321)
..+.+.||.+.|+++.|+.+|.+|++|+.|-.+.|||....+.+..+ .+|...|+++.|-|. ++.+++|..|..|++
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 34578899999999999999999999999999999998877776665 689999999999984 467899999999999
Q ss_pred EecCCC----------EEEEEEeCCCCCeeEEEEccCC-CEEEEEeCCCeEEEEeCCCCceee-------eecc--CCCC
Q 020798 142 WDVKTG----------KCLKVLPAHSDPVTAVDFNRDG-TMIVTSSYDGLCRIWDASTGHCMK-------TLID--DENP 201 (321)
Q Consensus 142 wd~~~~----------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~-------~~~~--~~~~ 201 (321)
+|+... +....+..|...|..++-.|++ ..+.++++||+++-+|++....-. .+.. ..--
T Consensus 122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li 201 (758)
T KOG1310|consen 122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI 201 (758)
T ss_pred EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence 998741 2334456788899999999988 678899999999999998642111 0100 1112
Q ss_pred CeEEEEEccCC-CEEEEEecCCeEEEEeCCC--------Cc----------EEEEEe-ccC--------CceeEEEeEEE
Q 020798 202 PVSFVKFSPNG-KFILVGTLDNTLRLWNYST--------GK----------ILKTYT-GHT--------NSKYCISSTFS 253 (321)
Q Consensus 202 ~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~--------~~----------~~~~~~-~~~--------~~~~~~~~~~~ 253 (321)
...++.++|.. .+|++|+.|-..++||.+. +. .+..+. +|. ....++....+
T Consensus 202 elk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtf 281 (758)
T KOG1310|consen 202 ELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTF 281 (758)
T ss_pred eeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEE
Confidence 34578888864 5678899999999999432 10 122221 111 11233444455
Q ss_pred ecCCeEEEEeCCCCeEEEEEcccceEE
Q 020798 254 VTNGKYIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
.|+|.-|+..-..-.|++||+...+.+
T Consensus 282 npNGtElLvs~~gEhVYlfdvn~~~~~ 308 (758)
T KOG1310|consen 282 NPNGTELLVSWGGEHVYLFDVNEDKSP 308 (758)
T ss_pred CCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence 677766655544557999999776543
No 206
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=1.6e-16 Score=136.94 Aligned_cols=210 Identities=19% Similarity=0.225 Sum_probs=141.9
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCC---ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe-
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSAD---KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS- 92 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d---~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~- 92 (321)
+.+..|...+..++|||||++|+.++.+ ..|.+|++.... ...+..+.+| ...++|+|||+.|+.++
T Consensus 197 ~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~------~~~l~~~~g~---~~~~~wSPDG~~La~~~~ 267 (429)
T PRK01742 197 FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGA------RKVVASFRGH---NGAPAFSPDGSRLAFASS 267 (429)
T ss_pred eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCc------eEEEecCCCc---cCceeECCCCCEEEEEEe
Confidence 4466788889999999999999987654 368889875321 1122233333 33689999999888764
Q ss_pred CCCcEEEE--ecCCcceeeeeecCcccEEEEEECCCCCEEEEee-CCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccC
Q 020798 93 DDKTIRLW--DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA-FDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 93 ~d~~i~iw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~ 168 (321)
.+|.+.|| |+.++. ...+..+...+....|+|||+.|+.++ .++..++|++... .....+ .+.. ....|+|+
T Consensus 268 ~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpD 343 (429)
T PRK01742 268 KDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISAD 343 (429)
T ss_pred cCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCC
Confidence 67876655 665554 344555666678899999999776544 5777888876432 122222 2332 45789999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC--CCCcEEEEEeccCC
Q 020798 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY--STGKILKTYTGHTN 243 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~ 243 (321)
++.++..+.++ +.+||+.+++... +... .......|+|+|++|+.++.++...+|++ .+++.+..+..+.+
T Consensus 344 G~~ia~~~~~~-i~~~Dl~~g~~~~-lt~~--~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g 416 (429)
T PRK01742 344 GKTLVMINGDN-VVKQDLTSGSTEV-LSST--FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDG 416 (429)
T ss_pred CCEEEEEcCCC-EEEEECCCCCeEE-ecCC--CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCC
Confidence 99998887765 4559998876432 2111 12245679999999999998888887775 35666676665543
No 207
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.75 E-value=3.9e-16 Score=120.62 Aligned_cols=232 Identities=18% Similarity=0.271 Sum_probs=172.7
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc---eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC--
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT---CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-- 147 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-- 147 (321)
..+|+|.+|++|+..+|.+.....|.||...... ..+.+..|...++.++|+|..+.|++|+.|..-++|....+
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~ 89 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT 89 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence 3679999999999999999999999999987665 45677889999999999999999999999999999998433
Q ss_pred -EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce---eeeeccCCCCCeEEEEEccCCCEEEEEecCCe
Q 020798 148 -KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC---MKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223 (321)
Q Consensus 148 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~ 223 (321)
++...+..++..++++.|+|.++.|++|+....|.+|-.+.... -+.+.......|.++.|+|++-++++|+.|+.
T Consensus 90 WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k 169 (361)
T KOG1523|consen 90 WKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGK 169 (361)
T ss_pred eccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcc
Confidence 23445566888999999999999999999999999987754321 12233345567899999999999999999999
Q ss_pred EEEEeCC-----C-------------CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce-EEEEec
Q 020798 224 LRLWNYS-----T-------------GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK-VVQKLE 284 (321)
Q Consensus 224 i~i~d~~-----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~ 284 (321)
.++|..- . |.+...+. ....+.-...| +++|..|+-.+.|..+.+-|..... .+..+.
T Consensus 170 ~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~--~~ggwvh~v~f-s~sG~~lawv~Hds~v~~~da~~p~~~v~~~~ 246 (361)
T KOG1523|consen 170 CRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS--SSGGWVHGVLF-SPSGNRLAWVGHDSTVSFVDAAGPSERVQSVA 246 (361)
T ss_pred eeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc--cCCCceeeeEe-CCCCCEeeEecCCCceEEeecCCCchhccchh
Confidence 9999741 0 11111111 11112222233 4679999999999999999987664 333333
Q ss_pred CCCCCeEEEEecCCCceEEEEeec
Q 020798 285 GHTDPVISVASHPTENIIASGALD 308 (321)
Q Consensus 285 ~h~~~v~~~~~~p~~~~l~s~~~d 308 (321)
...-|.+++.|-.+. .++.++.|
T Consensus 247 ~~~lP~ls~~~ise~-~vv~ag~~ 269 (361)
T KOG1523|consen 247 TAQLPLLSVSWISEN-SVVAAGYD 269 (361)
T ss_pred hccCCceeeEeecCC-ceeecCCC
Confidence 334688888886544 44444444
No 208
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.75 E-value=1.2e-15 Score=119.92 Aligned_cols=186 Identities=20% Similarity=0.379 Sum_probs=135.0
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeCCCcEEEEe
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLWD 101 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd 101 (321)
.-.+.-++|++.=..+|++..|-.|++|+.... .+..++. .-...|.+++|-|. ++.|+.|+..| |.+|.
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~ksst------~pt~Lks--~sQrnvtclawRPlsaselavgCr~g-IciW~ 168 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSST------CPTKLKS--VSQRNVTCLAWRPLSASELAVGCRAG-ICIWS 168 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCCC------CCceecc--hhhcceeEEEeccCCcceeeeeecce-eEEEE
Confidence 346777899998788999999999999976531 1111111 12457999999996 46788888766 88997
Q ss_pred cCCc----ce----------eeeeecCcccEEEEEECCCCCEEEEeeC-CCcEEEEecCCCEEEEEEeCCCCCeeEEEEc
Q 020798 102 VPTA----TC----------LKTLIGHTNYVFCVNFNPQSNMIVSGAF-DETVRIWDVKTGKCLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 102 ~~~~----~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~ 166 (321)
.... +. +..-.+| .+|.++.|++||..+++++. |..|.+||..++..+.......+.++-+.|+
T Consensus 169 ~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwS 247 (445)
T KOG2139|consen 169 DSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWS 247 (445)
T ss_pred cCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEc
Confidence 6431 11 1122344 57999999999999998874 5789999999987666554556678889999
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 167 RDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 167 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
||+..|++++-|+..++|...............+ .+....|+|.|++|+.+.
T Consensus 248 Pdgd~lfaAt~davfrlw~e~q~wt~erw~lgsg-rvqtacWspcGsfLLf~~ 299 (445)
T KOG2139|consen 248 PDGDVLFAATCDAVFRLWQENQSWTKERWILGSG-RVQTACWSPCGSFLLFAC 299 (445)
T ss_pred CCCCEEEEecccceeeeehhcccceecceeccCC-ceeeeeecCCCCEEEEEE
Confidence 9999999999999999996543322222222223 688899999999887654
No 209
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=5.4e-15 Score=127.21 Aligned_cols=220 Identities=13% Similarity=0.148 Sum_probs=146.6
Q ss_pred cccccccEEEEEECCCCCEEEEEe---CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEe-eCCC--cEEEE
Q 020798 69 FTGHEQGVSDLVFSSDSRFLVSAS---DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG-AFDE--TVRIW 142 (321)
Q Consensus 69 ~~~h~~~i~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg--~i~~w 142 (321)
+..+...+...+|+|||+.|+..+ .+..+.+|++.+++.. .+...........|+|||+.|+.. +.+| .|++|
T Consensus 194 lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~-~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~ 272 (429)
T PRK03629 194 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM 272 (429)
T ss_pred eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE-EccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEE
Confidence 344566789999999999888654 2357999999887532 222223334567999999988754 4444 58899
Q ss_pred ecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCC-C--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 143 DVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD-G--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 143 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
|+.+++... +..+...+....|+|+|+.++..+.+ + .|..+|+.++... .+.. .........|+|+|++++...
T Consensus 273 d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~-~~~~~~~~~~SpDG~~Ia~~~ 349 (429)
T PRK03629 273 DLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITW-EGSQNQDADVSSDGKFMVMVS 349 (429)
T ss_pred ECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-Eeec-CCCCccCEEECCCCCEEEEEE
Confidence 998876544 33444567889999999988776653 4 4555577665432 2221 222345678999999998765
Q ss_pred cC---CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCe---EEEEEcccceEEEEecCCCCCeEEE
Q 020798 220 LD---NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSC---VYLWELQSRKVVQKLEGHTDPVISV 293 (321)
Q Consensus 220 ~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~---i~vwd~~~~~~~~~~~~h~~~v~~~ 293 (321)
.+ ..|.+||+.+++.. .+.... .. ....+ .+||++|+..+.++. +.++++ .++....+.+|.+.+...
T Consensus 350 ~~~g~~~I~~~dl~~g~~~-~Lt~~~-~~--~~p~~-SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p 423 (429)
T PRK03629 350 SNGGQQHIAKQDLATGGVQ-VLTDTF-LD--ETPSI-APNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFP 423 (429)
T ss_pred ccCCCceEEEEECCCCCeE-EeCCCC-CC--CCceE-CCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCc
Confidence 43 35888999877643 333211 11 11223 478998888877764 667776 455566777888889999
Q ss_pred EecCC
Q 020798 294 ASHPT 298 (321)
Q Consensus 294 ~~~p~ 298 (321)
+|+|-
T Consensus 424 ~Wsp~ 428 (429)
T PRK03629 424 AWSPY 428 (429)
T ss_pred ccCCC
Confidence 99984
No 210
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.74 E-value=1.6e-14 Score=113.82 Aligned_cols=237 Identities=18% Similarity=0.292 Sum_probs=167.5
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC--CcEEEE
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD--KTIRLW 100 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d--~~i~iw 100 (321)
...+....|+.+...|..|+.||. ++|....... ..........|-.+-|+. .++|..+.+ +.++++
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~Gy-k~~~~~~~~k--------~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~ 73 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDGY-KIFSCSPFEK--------CFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVV 73 (391)
T ss_pred CcceeeeeeccceeEEEccCCCce-eEEecCchHH--------hhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEE
Confidence 445677779999999999998875 4565543221 000011123355556654 455555443 459999
Q ss_pred ecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC---CCCCeeEEEEccCCCEEEEE--
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA---HSDPVTAVDFNRDGTMIVTS-- 175 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-- 175 (321)
++.....+..+. ....|.++.++. +.|+++-.+ .|++||+++.+.+.++.. +...+.++++++.+.+++.-
T Consensus 74 ~~Kk~~~ICe~~-fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s 149 (391)
T KOG2110|consen 74 HFKKKTTICEIF-FPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGS 149 (391)
T ss_pred EcccCceEEEEe-cCCceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCC
Confidence 988877665544 456688888875 456666554 499999999988877643 33345555555555677653
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCe-EEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT-LRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
...|.|.+||+.+-+.+..+. .|...+.+++|+++|.+|++++..|+ ||||.+.+|+.+..+........ +....+.
T Consensus 150 ~t~GdV~l~d~~nl~~v~~I~-aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~-IySL~Fs 227 (391)
T KOG2110|consen 150 TTSGDVVLFDTINLQPVNTIN-AHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVS-IYSLSFS 227 (391)
T ss_pred CCCceEEEEEcccceeeeEEE-ecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeE-EEEEEEC
Confidence 346899999999887766654 77888999999999999999999886 79999999999999876554333 3344455
Q ss_pred cCCeEEEEeCCCCeEEEEEccc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
+++++|++.+..++|.+|.+..
T Consensus 228 ~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 228 PDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred CCCCeEEEecCCCeEEEEEecc
Confidence 7899999999999999998753
No 211
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=1.2e-16 Score=124.31 Aligned_cols=192 Identities=21% Similarity=0.353 Sum_probs=144.5
Q ss_pred CEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECC--CCCEEEEeeCCCcEEEEecCCCEEEEEE--eCCC-CCe
Q 020798 86 RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP--QSNMIVSGAFDETVRIWDVKTGKCLKVL--PAHS-DPV 160 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~-~~v 160 (321)
..+|++...|+|++||..+++.+..+.++...+..+.|.. ....+.+|+.||+|++||++.......+ ..+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5688899999999999999999999999999999998876 4577999999999999999986554433 3343 456
Q ss_pred eEEEEccCCCEEEEEe----CCCeEEEEeCCCCce-eeeeccCCCCCeEEEEEccC-CCEEEEEecCCeEEEEeCCCCcE
Q 020798 161 TAVDFNRDGTMIVTSS----YDGLCRIWDASTGHC-MKTLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKI 234 (321)
Q Consensus 161 ~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~~~~ 234 (321)
.+++.+..++.+++|+ .+-.+.+||.|..+. +..+...|...|+++.|+|. -++|++|+.||.+.+||+.....
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E 200 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE 200 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence 6777766777787775 356799999998765 66677778889999999995 56788999999999999875422
Q ss_pred ----EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEE
Q 020798 235 ----LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 235 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
+..+. +...+.++ -|..+.-..+.+-+......+|+++.+...
T Consensus 201 eDaL~~viN-~~sSI~~i--gw~~~~ykrI~clTH~Etf~~~ele~~~~~ 247 (376)
T KOG1188|consen 201 EDALLHVIN-HGSSIHLI--GWLSKKYKRIMCLTHMETFAIYELEDGSEE 247 (376)
T ss_pred hhhHHHhhc-ccceeeee--eeecCCcceEEEEEccCceeEEEccCCChh
Confidence 22221 22222222 233333346888888999999999876543
No 212
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.74 E-value=1.2e-17 Score=134.74 Aligned_cols=232 Identities=19% Similarity=0.282 Sum_probs=185.0
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
-+.+.+.++.+|++++.|+.-|.|..+|..+......+. -...|..+.|-.+..+|+++ ....+++||- .|..+..+
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~-~GtElHCl 206 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVA-QKKYVYVYDN-NGTELHCL 206 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhh-hhceEEEecC-CCcEEeeh
Confidence 456789999999999999999999999999988665543 34567888888777666654 5678999994 56666666
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~ 233 (321)
..| ..|..+.|-|..-+|++++..|.++.-|+.+|+.+..+.... ..+..+.-+|-...+-+|...|+|.+|.....+
T Consensus 207 k~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~-G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ske 284 (545)
T KOG1272|consen 207 KRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGA-GRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKE 284 (545)
T ss_pred hhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccC-CccchhhcCCccceEEEcCCCceEEecCCCCcc
Confidence 654 468899999998888999999999999999998877765443 356678888988889999999999999999988
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccE
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i 313 (321)
++..+.+|.+++..+ ...++|++++|.+.|..++|||++....+..+.. .-+...+++|..|. ||.+ .+ ..|
T Consensus 285 PLvKiLcH~g~V~si---Av~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkgl-LA~~-~G--~~v 356 (545)
T KOG1272|consen 285 PLVKILCHRGPVSSI---AVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGL-LALS-YG--DHV 356 (545)
T ss_pred hHHHHHhcCCCcceE---EECCCCcEEeecccccceeEeeeccccccceeec-CCCccccccccccc-eeee-cC--Cee
Confidence 888888888876554 4457899999999999999999998876666554 34678899986664 4443 22 368
Q ss_pred EEccc
Q 020798 314 KIWTQ 318 (321)
Q Consensus 314 ~iw~~ 318 (321)
.||.-
T Consensus 357 ~iw~d 361 (545)
T KOG1272|consen 357 QIWKD 361 (545)
T ss_pred eeehh
Confidence 99963
No 213
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.74 E-value=2.2e-15 Score=119.44 Aligned_cols=268 Identities=19% Similarity=0.270 Sum_probs=181.5
Q ss_pred cccEEEEEECCCCC--EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 23 LRAISSVKFSHDGR--LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 23 ~~~v~~~~~s~~g~--~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
...|+.++|.-+++ .|..++.+..+..+...+..... ....+.....-...|..++.. + ..|++|-.+|.+.+|
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s--~~~~~~~~~l~~~~I~gl~~~-d-g~Litc~~sG~l~~~ 130 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISS--SLDDAKTVSLGTKSIKGLKLA-D-GTLITCVSSGNLQVR 130 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCcccc--ccccccccccccccccchhhc-C-CEEEEEecCCcEEEE
Confidence 45678888886554 55556567777666554322111 001111223334556655543 3 367888999999999
Q ss_pred ecCCcc----eeeeeecCcccEEEEEECCCC-CEEEEeeCC--CcEEEEecCCCEEEEEEeCCC---------CCeeEEE
Q 020798 101 DVPTAT----CLKTLIGHTNYVFCVNFNPQS-NMIVSGAFD--ETVRIWDVKTGKCLKVLPAHS---------DPVTAVD 164 (321)
Q Consensus 101 d~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d--g~i~~wd~~~~~~~~~~~~~~---------~~v~~~~ 164 (321)
....+. .+..+. ....+..+.-.+.. ..+++|+.. ..+.+||+...+.+..-+.-. -.++++.
T Consensus 131 ~~k~~d~hss~l~~la-~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~ 209 (412)
T KOG3881|consen 131 HDKSGDLHSSKLIKLA-TGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIR 209 (412)
T ss_pred eccCCccccccceeee-cCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccce
Confidence 987443 112222 22445556556544 456668888 789999998875443322111 1356788
Q ss_pred EccC--CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEE-Eecc
Q 020798 165 FNRD--GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT-YTGH 241 (321)
Q Consensus 165 ~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~ 241 (321)
|-+. ...|++++.-+.+++||.+.++-....+.....+++++...|+|+++++|..-+.+..||++.++++.. +.+.
T Consensus 210 Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~ 289 (412)
T KOG3881|consen 210 FLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGI 289 (412)
T ss_pred ecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCc
Confidence 8887 779999999999999999976544333344567899999999999999999999999999999998877 7666
Q ss_pred CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCC
Q 020798 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299 (321)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~ 299 (321)
.+.+..+ ...+..+++|+++-|+.|||+|+++.++++..- -.+.++++.+.++-
T Consensus 290 tGsirsi---h~hp~~~~las~GLDRyvRIhD~ktrkll~kvY-vKs~lt~il~~~~~ 343 (412)
T KOG3881|consen 290 TGSIRSI---HCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY-VKSRLTFILLRDDV 343 (412)
T ss_pred cCCcceE---EEcCCCceEEeeccceeEEEeecccchhhhhhh-hhccccEEEecCCc
Confidence 6654443 445778899999999999999999987765432 13456677765553
No 214
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.74 E-value=2.2e-15 Score=117.04 Aligned_cols=275 Identities=20% Similarity=0.340 Sum_probs=177.0
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE-EEeCCCcEEEEecCCcce
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATC 107 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~ 107 (321)
..|||+|+++|+++.. .+.+-|... .+..+.+. --+.|.-+.|..|..+++ ....++.|.+|++...+.
T Consensus 14 c~fSp~g~yiAs~~~y-rlviRd~~t--------lq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew 83 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSRY-RLVIRDSET--------LQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEW 83 (447)
T ss_pred eeECCCCCeeeeeeee-EEEEeccch--------hhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeeccee
Confidence 6899999999999865 555544322 11111111 124577788998887665 457788999999988877
Q ss_pred eeeeecCcccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC-------
Q 020798 108 LKTLIGHTNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG------- 179 (321)
Q Consensus 108 ~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------- 179 (321)
...+..-.+.+..++|+|+|+. |.+...+-.|.+|.+.+.+... ++-....+..++|+|+|++.+.++...
T Consensus 84 ~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i 162 (447)
T KOG4497|consen 84 YCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQI 162 (447)
T ss_pred EEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEECCCCceeeeeecccHHHHHHH
Confidence 6677777788999999999965 5667789999999998765433 333344567788888888766654321
Q ss_pred -----------------------------eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 180 -----------------------------LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 180 -----------------------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
.+.+||.--.. +.+.-+.+-.+..++|+|.++++++|+.|+.+|+.+--
T Consensus 163 ~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Ley--kv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~ 240 (447)
T KOG4497|consen 163 SSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEY--KVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHF 240 (447)
T ss_pred HhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhh--eeeeeeeccceeEEEeccccceEEeeccchhhhhhcee
Confidence 12233311000 00111122457789999999999999999998886643
Q ss_pred CCcEEEEE------------------------------------------------------------e---ccCCceeE
Q 020798 231 TGKILKTY------------------------------------------------------------T---GHTNSKYC 247 (321)
Q Consensus 231 ~~~~~~~~------------------------------------------------------------~---~~~~~~~~ 247 (321)
+.+....+ + ...++...
T Consensus 241 tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g 320 (447)
T KOG4497|consen 241 TWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCG 320 (447)
T ss_pred eeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccc
Confidence 22111100 0 00011112
Q ss_pred EEeEEEecCCeEEEEeCC--CCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 248 ISSTFSVTNGKYIVSGSE--DSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 248 ~~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+....+.+|..++++-.. ...+-+||++..++...+. ...+|+...|+|....|+.+. +..++++|...
T Consensus 321 ~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vct--g~srLY~W~ps 391 (447)
T KOG4497|consen 321 AGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCT--GKSRLYFWAPS 391 (447)
T ss_pred cceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEc--CCceEEEEcCC
Confidence 333444567777777543 3578999998876544332 346899999999998877764 34568888753
No 215
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.73 E-value=3.2e-15 Score=116.78 Aligned_cols=286 Identities=22% Similarity=0.402 Sum_probs=186.3
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccccc------------ccEEEEEECCCCC--EE
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHE------------QGVSDLVFSSDSR--FL 88 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~i~~~~~~~~~~--~l 88 (321)
..-|+++.|.+.|++||+|..+|.|.++........+ ......+..|. ..|..+.|.++++ .+
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~e---y~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~F 101 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGE---YNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEF 101 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccc---eeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEE
Confidence 4568999999999999999999999999655433211 11112222332 3578899988764 56
Q ss_pred EEEeCCCcEEEEecCCccee-----------------------------------ee-eecCcccEEEEEECCCCCEEEE
Q 020798 89 VSASDDKTIRLWDVPTATCL-----------------------------------KT-LIGHTNYVFCVNFNPQSNMIVS 132 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~~~~-----------------------------------~~-~~~~~~~v~~~~~~~~~~~l~~ 132 (321)
+..+.|.+|++|.+...... +. -.+|.-.|.++.++.|...+++
T Consensus 102 LlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lS 181 (433)
T KOG1354|consen 102 LLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLS 181 (433)
T ss_pred EEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEee
Confidence 77889999999987432100 00 1357788999999999988887
Q ss_pred eeCCCcEEEEecCCCE-E--EEEEeCCC-----CCeeEEEEccCC-CEEEEEeCCCeEEEEeCCCCcee-------e---
Q 020798 133 GAFDETVRIWDVKTGK-C--LKVLPAHS-----DPVTAVDFNRDG-TMIVTSSYDGLCRIWDASTGHCM-------K--- 193 (321)
Q Consensus 133 ~~~dg~i~~wd~~~~~-~--~~~~~~~~-----~~v~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~-------~--- 193 (321)
+ .|-.|.+|.+.-.. . +..++.+. .-|++..|+|.. +.|+-.+..|+|++.|++....- .
T Consensus 182 A-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepe 260 (433)
T KOG1354|consen 182 A-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPE 260 (433)
T ss_pred c-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhcccc
Confidence 6 46889999875322 1 12222222 347889999964 56777888999999999842110 0
Q ss_pred -----eeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC-CCCcEEEEEeccCCce------------e-EEEeEEEe
Q 020798 194 -----TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY-STGKILKTYTGHTNSK------------Y-CISSTFSV 254 (321)
Q Consensus 194 -----~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~-~~~~~~~~~~~~~~~~------------~-~~~~~~~~ 254 (321)
.+....-..|..+.|++.|+++++-. --+|++||+ ...+++..++.|.... + ...+++ .
T Consensus 261 dp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~-s 338 (433)
T KOG1354|consen 261 DPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSW-S 338 (433)
T ss_pred CCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEE-c
Confidence 01111123477899999999997533 358999999 5667777777654211 1 112223 3
Q ss_pred cCCeEEEEeCCCCeEEEEEcccceE-------------------EEEec--CC-------------CCCeEEEEecCCCc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQSRKV-------------------VQKLE--GH-------------TDPVISVASHPTEN 300 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~-------------------~~~~~--~h-------------~~~v~~~~~~p~~~ 300 (321)
.++.+++||+....+++|++..+.. +.... +- ...+...+|||.++
T Consensus 339 g~~~~v~TGsy~n~frvf~~~~gsk~d~tl~asr~~~~~~~~~k~~~V~~~g~r~~~~~~vd~ldf~kkilh~aWhp~en 418 (433)
T KOG1354|consen 339 GNDSYVMTGSYNNVFRVFNLARGSKEDFTLEASRKNMKPRKVLKLRLVSSSGKRKRDEISVDALDFRKKILHTAWHPKEN 418 (433)
T ss_pred CCcceEecccccceEEEecCCCCcceeecccccccCCcccccccceeeecCCCccccccccchhhhhhHHHhhccCCccc
Confidence 4677999999999999999543211 00000 10 11245678999999
Q ss_pred eEEEEeecCCccEEEcc
Q 020798 301 IIASGALDNDRTVKIWT 317 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~ 317 (321)
.+|.+.. ..++|+.
T Consensus 419 ~ia~aat---nnlyif~ 432 (433)
T KOG1354|consen 419 SIAVAAT---NNLYIFQ 432 (433)
T ss_pred eeeeeec---CceEEec
Confidence 9999863 3566653
No 216
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.72 E-value=1.7e-14 Score=111.54 Aligned_cols=233 Identities=16% Similarity=0.288 Sum_probs=154.8
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCC------CcEEEEecCCCE
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFD------ETVRIWDVKTGK 148 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d------g~i~~wd~~~~~ 148 (321)
..+++|+.|..-+++|..+| .+||+.+..+.......+.+.+.-+..--..++|+ .|+.+ ..+.+||-...+
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~ 86 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKER 86 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCc
Confidence 34589999988888877766 89999876433222111222211111111234443 34333 468999966666
Q ss_pred EEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCC-CCceeeeeccCCCCCeEEEEEcc--CCCEEEE-EecCCeE
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-TGHCMKTLIDDENPPVSFVKFSP--NGKFILV-GTLDNTL 224 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~--~g~~l~~-~~~d~~i 224 (321)
++..+. ...+|.++.+.++ .+++.- .+.|++|... +.+.++.+....++.- .++..| ...+|+. |..-|+|
T Consensus 87 ~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkG-lC~~~~~~~k~~LafPg~k~Gqv 161 (346)
T KOG2111|consen 87 CIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKG-LCSLCPTSNKSLLAFPGFKTGQV 161 (346)
T ss_pred EEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCc-eEeecCCCCceEEEcCCCccceE
Confidence 666664 4678999999875 344443 4679999887 4444444433222211 233444 3334444 3456899
Q ss_pred EEEeCCCCcE--EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCe-EEEEEcccceEEEEecC--CCCCeEEEEecCCC
Q 020798 225 RLWNYSTGKI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSC-VYLWELQSRKVVQKLEG--HTDPVISVASHPTE 299 (321)
Q Consensus 225 ~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~--h~~~v~~~~~~p~~ 299 (321)
.|-|+...+. ...+..|...+.|+.. ..+|..+|+++..|+ |||||..++..+.+++- ....|.+++|||+.
T Consensus 162 Qi~dL~~~~~~~p~~I~AH~s~Iacv~L---n~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~ 238 (346)
T KOG2111|consen 162 QIVDLASTKPNAPSIINAHDSDIACVAL---NLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNS 238 (346)
T ss_pred EEEEhhhcCcCCceEEEcccCceeEEEE---cCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCc
Confidence 9999876554 4667788887766654 367999999999997 69999999999988764 23579999999999
Q ss_pred ceEEEEeecCCccEEEcccc
Q 020798 300 NIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 300 ~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+||++| +.|++.|+.++
T Consensus 239 s~LavsS--dKgTlHiF~l~ 256 (346)
T KOG2111|consen 239 SWLAVSS--DKGTLHIFSLR 256 (346)
T ss_pred cEEEEEc--CCCeEEEEEee
Confidence 9999987 46999999875
No 217
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.70 E-value=1.2e-14 Score=120.75 Aligned_cols=270 Identities=20% Similarity=0.269 Sum_probs=183.5
Q ss_pred CCcccEEEEEECCCCCEE-EEecCCceEEEeeccccCCCCCCCCCccccccccc-c-cEEEEEECCCCCEEEEEeCCCcE
Q 020798 21 GHLRAISSVKFSHDGRLL-ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHE-Q-GVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~-~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
+|...-+.+..+|||+|+ |+|..--.|++||+.... ..+..|. . .|.-.-.+.|-..++.-..|..|
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLS----------LKFERhlDae~V~feiLsDD~SK~v~L~~DR~I 118 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLS----------LKFERHLDAEVVDFEILSDDYSKSVFLQNDRTI 118 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccce----------eeeeecccccceeEEEeccchhhheEeecCcee
Confidence 577888899999999985 677778899999986432 1233332 2 23333334443344444567766
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY 177 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 177 (321)
.+........-.. -...-..++++.-..-|+.++....|+-+++..|+-+..+......++++..++...+|++|+.
T Consensus 119 efHak~G~hy~~R---IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~ 195 (703)
T KOG2321|consen 119 EFHAKYGRHYRTR---IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTE 195 (703)
T ss_pred eehhhcCeeeeee---cCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEeccc
Confidence 6543221111111 1122345566544444555666677899999999988888777789999999999989999999
Q ss_pred CCeEEEEeCCCCceeeeec----------cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeE
Q 020798 178 DGLCRIWDASTGHCMKTLI----------DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247 (321)
Q Consensus 178 dg~i~~~d~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 247 (321)
+|.+-+||.+....+..+. ....+.|+.+.|+.+|-.+++|+.+|.+.|||+++.+++..- .|......
T Consensus 196 ~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k-dh~~e~pi 274 (703)
T KOG2321|consen 196 DGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK-DHGYELPI 274 (703)
T ss_pred CceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec-ccCCccce
Confidence 9999999998754433321 112245899999999999999999999999999998776532 34333333
Q ss_pred EEeEEEecC-CeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 248 ISSTFSVTN-GKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 248 ~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
....|...+ +..+++ .....++|||-.+++....+.. ...++.+++-|+.-++.+|-
T Consensus 275 ~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~An 332 (703)
T KOG2321|consen 275 KKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTAN 332 (703)
T ss_pred eeecccccCCCceEEe-cchHHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEec
Confidence 333343333 334544 4456789999999998877764 45699999999998888875
No 218
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=2.3e-14 Score=123.42 Aligned_cols=220 Identities=18% Similarity=0.194 Sum_probs=140.8
Q ss_pred cccccccEEEEEECCCCCEEEEEeCC---CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCCcEEEE--
Q 020798 69 FTGHEQGVSDLVFSSDSRFLVSASDD---KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDETVRIW-- 142 (321)
Q Consensus 69 ~~~h~~~i~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~w-- 142 (321)
+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++.. .+...........|+|||+.|+ +.+.++...+|
T Consensus 191 l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 191 ALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR-VVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred eccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence 44566778899999999998877643 35999999888643 2333344556789999999876 45677775555
Q ss_pred ecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CCeEEEE--eCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 143 DVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DGLCRIW--DASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 143 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
|+..+. ...+..+........|+|||+.++..+. ++...+| ++.++.... +... ........|+|+|++|+..+
T Consensus 270 d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~-g~~~~~~~~SpDG~~Ia~~s 346 (427)
T PRK02889 270 NADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR-VTFT-GSYNTSPRISPDGKLLAYIS 346 (427)
T ss_pred ECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE-EecC-CCCcCceEECCCCCEEEEEE
Confidence 454444 3444445555677899999998876654 4555555 444443322 2211 12233578999999998776
Q ss_pred cCC---eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC---eEEEEEcccceEEEEecCCCCCeEEE
Q 020798 220 LDN---TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS---CVYLWELQSRKVVQKLEGHTDPVISV 293 (321)
Q Consensus 220 ~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~h~~~v~~~ 293 (321)
.++ .|.+||+.+++....... . .. .. ..+.+||+.|+..+.++ .+.+.++ .++....+..+.+.+...
T Consensus 347 ~~~g~~~I~v~d~~~g~~~~lt~~-~-~~--~~-p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p 420 (427)
T PRK02889 347 RVGGAFKLYVQDLATGQVTALTDT-T-RD--ES-PSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREP 420 (427)
T ss_pred ccCCcEEEEEEECCCCCeEEccCC-C-Cc--cC-ceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCC
Confidence 544 699999988765432221 1 11 11 22346888777665433 3555566 355556666666778888
Q ss_pred EecCC
Q 020798 294 ASHPT 298 (321)
Q Consensus 294 ~~~p~ 298 (321)
+|+|.
T Consensus 421 ~wsp~ 425 (427)
T PRK02889 421 SWGPF 425 (427)
T ss_pred ccCCC
Confidence 88874
No 219
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.70 E-value=2.1e-14 Score=128.85 Aligned_cols=253 Identities=17% Similarity=0.244 Sum_probs=167.9
Q ss_pred cccccccccccEEEEEECCCC-CEEEEEeCCCcEEEEecCCc-------ceeeeeecCcccEEEEEECCCCCEEEEeeCC
Q 020798 65 PLQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTA-------TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 136 (321)
.+..+..|+..+..++.++.. .++++|+.||+|++|+...- +...++......+.++...+.++.++.++.|
T Consensus 1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKD 1119 (1431)
T ss_pred EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCC
Confidence 345667788888888888765 99999999999999997542 1222333346678889999999999999999
Q ss_pred CcEEEEecCCCE-------EEEEEeCC-CCCeeEE-EEcc-CCC-EEEEEeCCCeEEEEeCCCCceeeeec-cCCCCCeE
Q 020798 137 ETVRIWDVKTGK-------CLKVLPAH-SDPVTAV-DFNR-DGT-MIVTSSYDGLCRIWDASTGHCMKTLI-DDENPPVS 204 (321)
Q Consensus 137 g~i~~wd~~~~~-------~~~~~~~~-~~~v~~~-~~~~-~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~ 204 (321)
|.|++.++...+ +......+ .+.+.++ +|.. .+. .++.+...+.+..||+++.....+.. ....+.++
T Consensus 1120 G~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vT 1199 (1431)
T KOG1240|consen 1120 GSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVT 1199 (1431)
T ss_pred CeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccccee
Confidence 999999886521 11111111 2333333 2322 233 67778888999999998754433322 12345689
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec-cCCceeEEEeEEEecCCeEEEE-eC-CCCeEEEEEcccceEEE
Q 020798 205 FVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG-HTNSKYCISSTFSVTNGKYIVS-GS-EDSCVYLWELQSRKVVQ 281 (321)
Q Consensus 205 ~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~~-~dg~i~vwd~~~~~~~~ 281 (321)
+++.+|.+.++++|+..|.+.+||++-+.++.++.- +......+..+...+.....++ +. ..+.|.+|++.++..-.
T Consensus 1200 Si~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~ 1279 (1431)
T KOG1240|consen 1200 SIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQT 1279 (1431)
T ss_pred EEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceE
Confidence 999999999999999999999999998888877642 2233444444444343344444 44 57889999998875433
Q ss_pred EecCC-------------------CCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 282 KLEGH-------------------TDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 282 ~~~~h-------------------~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+... .-+.....+...+..+.+|+ .|..|+.||..
T Consensus 1280 vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltgg--sd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1280 VLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGG--SDMKIRKWDPT 1334 (1431)
T ss_pred EEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecC--CccceeeccCC
Confidence 32211 11122333444455677776 45789999974
No 220
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.69 E-value=1.7e-14 Score=124.71 Aligned_cols=220 Identities=19% Similarity=0.170 Sum_probs=145.2
Q ss_pred ccccccccEEEEEECCCCCEEEEEeCC---CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCC--cEEE
Q 020798 68 KFTGHEQGVSDLVFSSDSRFLVSASDD---KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDE--TVRI 141 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg--~i~~ 141 (321)
.+..+...+...+|+|+|+.|+..+.+ ..|.+||+.+++.. .+...........|+|+|+.++ +.+.+| .|++
T Consensus 198 ~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~ 276 (433)
T PRK04922 198 TILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYV 276 (433)
T ss_pred EeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCCEEEEEEeCCCCceEEE
Confidence 345566788999999999999877643 46999999877643 2333344455789999998775 445555 5999
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CCe--EEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DGL--CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 218 (321)
||+.+++.. .+..+.......+|+|+++.++.++. +|. +.++|+.+++... +.. ........+|+|+|++|+..
T Consensus 277 ~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~-~g~~~~~~~~SpDG~~Ia~~ 353 (433)
T PRK04922 277 MDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTF-QGNYNARASVSPDGKKIAMV 353 (433)
T ss_pred EECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eec-CCCCccCEEECCCCCEEEEE
Confidence 999887643 34445555567899999998877664 444 6667776665332 221 12223457999999999876
Q ss_pred ecCC---eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCC---CCeEEEEEcccceEEEEecCCCCCeEE
Q 020798 219 TLDN---TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE---DSCVYLWELQSRKVVQKLEGHTDPVIS 292 (321)
Q Consensus 219 ~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~h~~~v~~ 292 (321)
+.++ .|.+||+.+++.. .+.... .. .... ..+||++++..+. .+.|.++++. +.....+..+.+.+..
T Consensus 354 ~~~~~~~~I~v~d~~~g~~~-~Lt~~~-~~--~~p~-~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~ 427 (433)
T PRK04922 354 HGSGGQYRIAVMDLSTGSVR-TLTPGS-LD--ESPS-FAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVRE 427 (433)
T ss_pred ECCCCceeEEEEECCCCCeE-ECCCCC-CC--CCce-ECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCC
Confidence 5433 6999999877654 332111 11 1122 3478887765544 3457788875 4445566666667788
Q ss_pred EEecC
Q 020798 293 VASHP 297 (321)
Q Consensus 293 ~~~~p 297 (321)
.+|+|
T Consensus 428 p~wsp 432 (433)
T PRK04922 428 PAWSP 432 (433)
T ss_pred CccCC
Confidence 88887
No 221
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.69 E-value=3.3e-14 Score=122.40 Aligned_cols=209 Identities=17% Similarity=0.177 Sum_probs=135.9
Q ss_pred ccCCcccEEEEEECCCCCEEEEecC---CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE-eCC
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSA---DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA-SDD 94 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~---d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~-~~d 94 (321)
+..+...+...+|||||+.|+..+. +..+.+|++.... ...+..+.+ .+....|+|||+.|+.. +.+
T Consensus 194 lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~------~~~l~~~~~---~~~~~~~SPDG~~La~~~~~~ 264 (429)
T PRK03629 194 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA------VRQVASFPR---HNGAPAFSPDGSKLAFALSKT 264 (429)
T ss_pred eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC------eEEccCCCC---CcCCeEECCCCCEEEEEEcCC
Confidence 3446678899999999999887542 3467777764321 112222333 34468999999988754 445
Q ss_pred C--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC-C--cEEEEecCCCEEEEEEeCCCCCeeEEEEccCC
Q 020798 95 K--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD-E--TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDG 169 (321)
Q Consensus 95 ~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (321)
+ .|.+||+.+++.. .+..+...+....|+|+|+.|+..+.+ + .|+++|+.+++.. .+...........|+|+|
T Consensus 265 g~~~I~~~d~~tg~~~-~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~SpDG 342 (429)
T PRK03629 265 GSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDG 342 (429)
T ss_pred CCcEEEEEECCCCCEE-EccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCC
Confidence 4 5888999887643 344444556788999999988766643 4 4555577665433 333344455678999999
Q ss_pred CEEEEEeCC---CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCe---EEEEeCCCCcEEEEEeccC
Q 020798 170 TMIVTSSYD---GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT---LRLWNYSTGKILKTYTGHT 242 (321)
Q Consensus 170 ~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~---i~i~d~~~~~~~~~~~~~~ 242 (321)
+.++..+.+ ..+.+||+.++... .+... .......|+|||++|+.++.++. +.++++ +++....+..+.
T Consensus 343 ~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~--~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~ 417 (429)
T PRK03629 343 KFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT--FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATD 417 (429)
T ss_pred CEEEEEEccCCCceEEEEECCCCCeE-EeCCC--CCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCC
Confidence 988776543 35888999877532 22221 12335689999999998887753 677776 344445554443
No 222
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=1e-13 Score=109.22 Aligned_cols=252 Identities=15% Similarity=0.188 Sum_probs=159.7
Q ss_pred CcccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCC------CCCCcccccccccccEEEEEECCCCCEEEEEeC-
Q 020798 22 HLRAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDS------TPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD- 93 (321)
Q Consensus 22 h~~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~------~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~- 93 (321)
..+.|+|++|-|-+ +.|++|.. +.|.+|....-..... .....+...++| ..|++|.|.+||..+++++-
T Consensus 139 sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~g 216 (445)
T KOG2139|consen 139 SQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFG 216 (445)
T ss_pred hhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccC
Confidence 45789999999965 56777764 5577897654322111 111122334556 68999999999999998875
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
|..|.|||.+++..+.-...-.+.+.-+.|+||+.+|+++.-|+..++|+.....-........+.|....|+|.|+.|+
T Consensus 217 sssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLL 296 (445)
T KOG2139|consen 217 SSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLL 296 (445)
T ss_pred cceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEE
Confidence 56799999999876554433455678899999999999999999999996544332223334456899999999999765
Q ss_pred EE-eCCCeEEEEeC--CCCcee-----ee--ec---------cC---CCCCeEEEEEccCCCEEEEEecCC--------e
Q 020798 174 TS-SYDGLCRIWDA--STGHCM-----KT--LI---------DD---ENPPVSFVKFSPNGKFILVGTLDN--------T 223 (321)
Q Consensus 174 ~~-~~dg~i~~~d~--~~~~~~-----~~--~~---------~~---~~~~~~~~~~~~~g~~l~~~~~d~--------~ 223 (321)
.+ +....++-... +..... +. +. .. -.....+++|+|.|.+|++.-..+ .
T Consensus 297 f~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~ 376 (445)
T KOG2139|consen 297 FACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLH 376 (445)
T ss_pred EEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhh
Confidence 44 44333322111 111000 00 00 00 123467899999999999865433 3
Q ss_pred EEEEeCCCCcEEEEE-eccCC--ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 224 LRLWNYSTGKILKTY-TGHTN--SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 224 i~i~d~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
|.+||.+....+... -+... ....+++.+...++.+|..+=+.|.+.-|++.
T Consensus 377 i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 377 ISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred hhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence 777887655433322 11111 12234444444567777777777777777663
No 223
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.68 E-value=1.5e-14 Score=114.77 Aligned_cols=240 Identities=18% Similarity=0.238 Sum_probs=168.2
Q ss_pred cccEEEEEECCCCC--EEEEEeCCCcEEEEecCCcceeeee------ecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 73 EQGVSDLVFSSDSR--FLVSASDDKTIRLWDVPTATCLKTL------IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 73 ~~~i~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
...|..++|..+++ .+...+.+..+..+.+....+.... ......|..+... ...|++|-.+|.+.+|..
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~~ 132 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVRHD 132 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEEec
Confidence 34577788876553 4555557777777777665543322 2233444444433 457888899999999998
Q ss_pred CCCE----EEEEEeCCCCCeeEEEEccCCC-EEEEEeCC--CeEEEEeCCCCceeeeeccCCC--------CCeEEEEEc
Q 020798 145 KTGK----CLKVLPAHSDPVTAVDFNRDGT-MIVTSSYD--GLCRIWDASTGHCMKTLIDDEN--------PPVSFVKFS 209 (321)
Q Consensus 145 ~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d--g~i~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~ 209 (321)
+.+. ....+..+ ..+..+.-++... .+++|+.. ..+.+||+...+.+.+.....+ --++.+.|-
T Consensus 133 k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl 211 (412)
T KOG3881|consen 133 KSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFL 211 (412)
T ss_pred cCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceec
Confidence 7442 22223333 3455565565544 55668888 8899999987644332211110 124567788
Q ss_pred cC--CCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEE-ecC
Q 020798 210 PN--GKFILVGTLDNTLRLWNYSTG-KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK-LEG 285 (321)
Q Consensus 210 ~~--g~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~ 285 (321)
+. ...|++++.-+.+++||.+.+ +++..+.-...+..++ ...+++.++++|..-|.+..||++.++++.. +++
T Consensus 212 ~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~---~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg 288 (412)
T KOG3881|consen 212 EGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISST---GLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKG 288 (412)
T ss_pred CCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceee---eecCCCcEEEEecccchhheecccCceeeccccCC
Confidence 77 788999999999999999875 4666665544444443 3447899999999999999999999998876 888
Q ss_pred CCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 286 HTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 286 h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
-.+.|+++..+|...++|++|.| +.|+|+|.+.
T Consensus 289 ~tGsirsih~hp~~~~las~GLD--RyvRIhD~kt 321 (412)
T KOG3881|consen 289 ITGSIRSIHCHPTHPVLASCGLD--RYVRIHDIKT 321 (412)
T ss_pred ccCCcceEEEcCCCceEEeeccc--eeEEEeeccc
Confidence 89999999999999999999987 7999999863
No 224
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.68 E-value=2.2e-14 Score=109.32 Aligned_cols=154 Identities=20% Similarity=0.465 Sum_probs=109.2
Q ss_pred EEEEECCCCCEEEEEeC----------CCcEEEEecCCc-ceeeeeec-CcccEEEEEECCCCCEEEEe--eCCCcEEEE
Q 020798 77 SDLVFSSDSRFLVSASD----------DKTIRLWDVPTA-TCLKTLIG-HTNYVFCVNFNPQSNMIVSG--AFDETVRIW 142 (321)
Q Consensus 77 ~~~~~~~~~~~l~~~~~----------d~~i~iwd~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~dg~i~~w 142 (321)
..+.|+++|++|+.-.. -+...+|.++.. .....+.- ..+.|..++|+|+++.|+.. ..+..|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 45789999988764433 134555655332 22233322 34469999999999987554 456799999
Q ss_pred ecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC---CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 143 DVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY---DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 143 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
|++ ++.+..+ +...+..+.|+|+|+++++++. .|.+.+||.++.+.+... ....+..++|+|+|++++++.
T Consensus 89 d~~-~~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~---~~~~~t~~~WsPdGr~~~ta~ 162 (194)
T PF08662_consen 89 DVK-GKKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTF---EHSDATDVEWSPDGRYLATAT 162 (194)
T ss_pred cCc-ccEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecc---ccCcEEEEEEcCCCCEEEEEE
Confidence 997 5555555 3567789999999999998874 467999999977665543 234578899999999999876
Q ss_pred c------CCeEEEEeCCCCcEEEE
Q 020798 220 L------DNTLRLWNYSTGKILKT 237 (321)
Q Consensus 220 ~------d~~i~i~d~~~~~~~~~ 237 (321)
. |+.++||+.. |+.+..
T Consensus 163 t~~r~~~dng~~Iw~~~-G~~l~~ 185 (194)
T PF08662_consen 163 TSPRLRVDNGFKIWSFQ-GRLLYK 185 (194)
T ss_pred eccceeccccEEEEEec-CeEeEe
Confidence 4 6778999974 555544
No 225
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=2.1e-13 Score=118.00 Aligned_cols=221 Identities=17% Similarity=0.170 Sum_probs=144.6
Q ss_pred cccccccccEEEEEECCCCCEEEEEeC---CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCCc--EE
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASD---DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDET--VR 140 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~ 140 (321)
+.+..|...+...+|+|||+.|+..+. +..|.+||+.+++. ..+..+.+.+....|+|||+.|+ +.+.++. |+
T Consensus 195 ~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 273 (435)
T PRK05137 195 RYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIY 273 (435)
T ss_pred EEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEECCCCCEEEEEEecCCCceEE
Confidence 445677788999999999998887653 46799999988764 33444556677889999998875 5555554 77
Q ss_pred EEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEE
Q 020798 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 141 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
+||+.+++.. .+..+........|+|+|+.++..+. +| .|+++|+.++... .+... ........|+|+|+.|+.
T Consensus 274 ~~d~~~~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~-~~~~~~~~~SpdG~~ia~ 350 (435)
T PRK05137 274 TMDLRSGTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFG-GGRYSTPVWSPRGDLIAF 350 (435)
T ss_pred EEECCCCceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecC-CCcccCeEECCCCCEEEE
Confidence 8898877643 45555556678999999998887663 33 6888888765433 33222 233456789999999987
Q ss_pred EecC---CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC------CeEEEEEcccceEEEEecCCCC
Q 020798 218 GTLD---NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED------SCVYLWELQSRKVVQKLEGHTD 288 (321)
Q Consensus 218 ~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~h~~ 288 (321)
...+ ..|.+||+..+.. ..+... .. .....+.+||+.|+..+.+ ..+.++|+..+.. ..+.. ..
T Consensus 351 ~~~~~~~~~i~~~d~~~~~~-~~lt~~-~~---~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~~-~~ 423 (435)
T PRK05137 351 TKQGGGQFSIGVMKPDGSGE-RILTSG-FL---VEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVPT-PG 423 (435)
T ss_pred EEcCCCceEEEEEECCCCce-EeccCC-CC---CCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEccC-CC
Confidence 6543 3688888765443 333211 11 1112234688877654332 3577888765543 34432 33
Q ss_pred CeEEEEecCC
Q 020798 289 PVISVASHPT 298 (321)
Q Consensus 289 ~v~~~~~~p~ 298 (321)
.+...+|+|-
T Consensus 424 ~~~~p~Wsp~ 433 (435)
T PRK05137 424 DASDPAWSPL 433 (435)
T ss_pred CccCcccCCC
Confidence 4667777764
No 226
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.67 E-value=2.5e-15 Score=123.74 Aligned_cols=144 Identities=21% Similarity=0.435 Sum_probs=116.0
Q ss_pred cccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCC--------------------CCCcccccccccccEEEEEE
Q 020798 23 LRAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDST--------------------PPSPLQKFTGHEQGVSDLVF 81 (321)
Q Consensus 23 ~~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~--------------------~~~~~~~~~~h~~~i~~~~~ 81 (321)
+..|+|+.|-|.+ .+++++-.+|.+.+|+..-....... ...|+..+..-.+.|...+|
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F 298 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF 298 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence 3679999999855 46777888999999876322111100 01223333334467899999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCee
Q 020798 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT 161 (321)
Q Consensus 82 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~ 161 (321)
+|||++||+.+.||.++|+|..+.+.+..++..-+...|++|+|||++|++|+.|-.|.||.+...+.+..-++|...|.
T Consensus 299 S~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs 378 (636)
T KOG2394|consen 299 SPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVS 378 (636)
T ss_pred cCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEecccccccee
Confidence 99999999999999999999999887766667778899999999999999999999999999999999888889999999
Q ss_pred EEEEc
Q 020798 162 AVDFN 166 (321)
Q Consensus 162 ~~~~~ 166 (321)
.++|.
T Consensus 379 ~VaFD 383 (636)
T KOG2394|consen 379 VVAFD 383 (636)
T ss_pred eEeec
Confidence 99998
No 227
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.66 E-value=3.2e-15 Score=112.64 Aligned_cols=239 Identities=19% Similarity=0.298 Sum_probs=155.2
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC-----CCC----EEEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS-----DSR----FLVSA 91 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-----~~~----~l~~~ 91 (321)
.|...|+.+.--|+ ..|.+-+.|..+..|++.... ....|.-.++++-|.+ .++ .++.-
T Consensus 54 ~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~-----------~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp 121 (323)
T KOG0322|consen 54 FGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSA-----------FISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYP 121 (323)
T ss_pred hccceeeceeecCC-cchhhcCCCceEEEEEccCcc-----------eEEEeeeeccccccccceeccCCCcchhheecC
Confidence 45667888888887 567788899999999876411 1112232333333332 111 11111
Q ss_pred eCCC-cEEEEecCCcceeee----eecCcccEEEEEECC-CCC--EEEEeeCCCcEEEEecCCCEEE----------EEE
Q 020798 92 SDDK-TIRLWDVPTATCLKT----LIGHTNYVFCVNFNP-QSN--MIVSGAFDETVRIWDVKTGKCL----------KVL 153 (321)
Q Consensus 92 ~~d~-~i~iwd~~~~~~~~~----~~~~~~~v~~~~~~~-~~~--~l~~~~~dg~i~~wd~~~~~~~----------~~~ 153 (321)
+... .+.+-|......+.. -.+..+.+.+..+.. ++. ++++|..+|.+-+||+.++..+ ...
T Consensus 122 ~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ 201 (323)
T KOG0322|consen 122 SRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPN 201 (323)
T ss_pred CcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccch
Confidence 1000 011112111111110 112334566665433 233 3567889999999999887332 334
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC--Cce-eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
..|..+|.++.|.+.-..=++++.+..+..|.+.. +.+ +.....-.++.+..+.+-||++.+++++.|+.||||+.+
T Consensus 202 ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswr 281 (323)
T KOG0322|consen 202 ASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWR 281 (323)
T ss_pred hhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEec
Confidence 56889999999987666667788888888888753 222 122222345678889999999999999999999999999
Q ss_pred CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
+..++..++-|...+.+++ +.++...+|+++.|++|.+|++
T Consensus 282 tl~pLAVLkyHsagvn~vA---fspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 282 TLNPLAVLKYHSAGVNAVA---FSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred cCCchhhhhhhhcceeEEE---eCCCCchhhhccCCceEEeeec
Confidence 9999999998887665543 3467889999999999999986
No 228
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.65 E-value=5.9e-14 Score=107.01 Aligned_cols=149 Identities=19% Similarity=0.365 Sum_probs=105.6
Q ss_pred EEEECCCCCEEEEecC----------CceEEEeeccccCCCCCCCCCccccccc-ccccEEEEEECCCCCEEEEE--eCC
Q 020798 28 SVKFSHDGRLLASSSA----------DKTLLTYSLSSISNSDSTPPSPLQKFTG-HEQGVSDLVFSSDSRFLVSA--SDD 94 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~~----------d~~v~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~~~~~~~l~~~--~~d 94 (321)
.+.|+|+|++|+.-.. -+...+|.+... ..+...+.- ..+.|.+++|+|+|+.|++. ..+
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~-------~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~ 82 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEK-------NIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMP 82 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecC-------CCccceeeccCCCceEEEEECcCCCEEEEEEccCC
Confidence 5789999998765332 223445544321 112222222 23569999999999987544 456
Q ss_pred CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC---CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCE
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF---DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 171 (321)
..|.+||++ .+.+..+ +...+..+.|+|+|+++++++. .|.|.+||.++.+.+.... | ..++.++|+|+|++
T Consensus 83 ~~v~lyd~~-~~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~ 157 (194)
T PF08662_consen 83 AKVTLYDVK-GKKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVEWSPDGRY 157 (194)
T ss_pred cccEEEcCc-ccEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEEEcCCCCE
Confidence 799999996 4444444 3456788999999999998874 3679999999888777654 3 34789999999999
Q ss_pred EEEEeC------CCeEEEEeCCC
Q 020798 172 IVTSSY------DGLCRIWDAST 188 (321)
Q Consensus 172 l~~~~~------dg~i~~~d~~~ 188 (321)
++++.. |+.++||+...
T Consensus 158 ~~ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 158 LATATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred EEEEEeccceeccccEEEEEecC
Confidence 998763 67788898753
No 229
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=7.9e-14 Score=120.13 Aligned_cols=206 Identities=21% Similarity=0.232 Sum_probs=131.3
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCC---ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE-EEeC
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSAD---KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV-SASD 93 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d---~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~-~~~~ 93 (321)
.+..+...+.+.+|+|||+.|+..+.+ ..+.+|++.... ...+....+.+...+|+|||+.|+ +.+.
T Consensus 190 ~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~---------~~~l~~~~g~~~~~~~SPDG~~la~~~~~ 260 (427)
T PRK02889 190 SALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGR---------RRVVANFKGSNSAPAWSPDGRTLAVALSR 260 (427)
T ss_pred EeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCC---------EEEeecCCCCccceEECCCCCEEEEEEcc
Confidence 345677889999999999999877643 358888875421 111222234456789999998886 5677
Q ss_pred CCcEEEEe--cCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CCcEEEEe--cCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 94 DKTIRLWD--VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DETVRIWD--VKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 94 d~~i~iwd--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~wd--~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
++...+|. +..+. ...+..+........|+|||+.|+..+. ++...+|. +.+++.. .+..........+|+|+
T Consensus 261 ~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g~~~~~~~~SpD 338 (427)
T PRK02889 261 DGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTGSYNTSPRISPD 338 (427)
T ss_pred CCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecCCCCcCceEECCC
Confidence 78766665 44443 3445445555567889999998776553 45555654 4444432 22222333456789999
Q ss_pred CCEEEEEeCCC---eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC---eEEEEeCCCCcEEEEE
Q 020798 169 GTMIVTSSYDG---LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN---TLRLWNYSTGKILKTY 238 (321)
Q Consensus 169 ~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~---~i~i~d~~~~~~~~~~ 238 (321)
|+.++..+.++ .|.+||+.+++.. .+... .......|+|+|++|+.++.++ .+.+.++ +++....+
T Consensus 339 G~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l 410 (427)
T PRK02889 339 GKLLAYISRVGGAFKLYVQDLATGQVT-ALTDT--TRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRL 410 (427)
T ss_pred CCEEEEEEccCCcEEEEEEECCCCCeE-EccCC--CCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEe
Confidence 99988776544 6999999877643 22221 2235678999999988876543 3555555 34434333
No 230
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=6.1e-13 Score=115.18 Aligned_cols=215 Identities=17% Similarity=0.151 Sum_probs=140.4
Q ss_pred CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC---CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCE
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF---DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 171 (321)
..|.++|..... .+.+..+...+....|+|||+.|+..+. +..|++||+.+++.. .+..+...+...+|+|+|+.
T Consensus 182 ~~l~~~d~dg~~-~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~ 259 (435)
T PRK05137 182 KRLAIMDQDGAN-VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRK 259 (435)
T ss_pred eEEEEECCCCCC-cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCE
Confidence 368888875544 4556677888999999999998887653 468999999887653 34445667778999999987
Q ss_pred EE-EEeCCCe--EEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-C--CeEEEEeCCCCcEEEEEeccCCce
Q 020798 172 IV-TSSYDGL--CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-D--NTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 172 l~-~~~~dg~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d--~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
++ +.+.++. |.+||+.++... .+. ..........|+|+|+.|+..+. + ..|.++|+..++... +.......
T Consensus 260 la~~~~~~g~~~Iy~~d~~~~~~~-~Lt-~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~~~~~~ 336 (435)
T PRK05137 260 VVMSLSQGGNTDIYTMDLRSGTTT-RLT-DSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISFGGGRY 336 (435)
T ss_pred EEEEEecCCCceEEEEECCCCceE-Ecc-CCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eecCCCcc
Confidence 75 4455554 777788876543 332 23333456899999998887653 3 368888987665433 32222211
Q ss_pred eEEEeEEEecCCeEEEEeCCC---CeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCc----cEEEccc
Q 020798 246 YCISSTFSVTNGKYIVSGSED---SCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR----TVKIWTQ 318 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~----~i~iw~~ 318 (321)
......++|+.|+..+.+ ..|.+||+..+.. ..+. ....+.+..|+|||+.|+..+.+..+ .+.++++
T Consensus 337 ---~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl 411 (435)
T PRK05137 337 ---STPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDL 411 (435)
T ss_pred ---cCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEEC
Confidence 112234788888765432 3688888755432 2332 22346788999999998876644322 4666655
Q ss_pred c
Q 020798 319 E 319 (321)
Q Consensus 319 ~ 319 (321)
+
T Consensus 412 ~ 412 (435)
T PRK05137 412 T 412 (435)
T ss_pred C
Confidence 3
No 231
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.65 E-value=4.1e-15 Score=121.08 Aligned_cols=252 Identities=21% Similarity=0.363 Sum_probs=180.0
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeee-ecCcccEEEEEECCC--CCEEEEeeCCCcEEEEe
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL-IGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWD 143 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd 143 (321)
..+..|.+.|..+.|+..|..|++|+.|..|.+||...+.....+ .+|...|+...|-|. ...+++++.||.+++=.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 456789999999999999999999999999999999887655444 678888888888885 35689999999999766
Q ss_pred cCC-CEE--EEEEeCCCCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeecc--CCCC---CeEEEEEccCCC-
Q 020798 144 VKT-GKC--LKVLPAHSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLID--DENP---PVSFVKFSPNGK- 213 (321)
Q Consensus 144 ~~~-~~~--~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~---~~~~~~~~~~g~- 213 (321)
+.. +.. ...+..|.++|..++.-|+.. .|.+++.|+.+.-+|++.......+.. .... ....++.+|...
T Consensus 216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~ 295 (559)
T KOG1334|consen 216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTN 295 (559)
T ss_pred eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcc
Confidence 533 222 334567899999999999765 688999999999999987654333221 1112 356788888665
Q ss_pred EEEEEecCCeEEEEeCCCCc------EEEEEeccC---CceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc--c-----
Q 020798 214 FILVGTLDNTLRLWNYSTGK------ILKTYTGHT---NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS--R----- 277 (321)
Q Consensus 214 ~l~~~~~d~~i~i~d~~~~~------~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~--~----- 277 (321)
.+++++.|..+++||.+.-. .+..+..+. .....|+...+..++.-|.+.-.|-.|++|.-.. +
T Consensus 296 ~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~ 375 (559)
T KOG1334|consen 296 EFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDP 375 (559)
T ss_pred ccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCC
Confidence 78899999999999976422 223332221 1122344444544555556666778899995321 2
Q ss_pred -----eEEEE-ecCCCC--CeEEEE-ecCCCceEEEEeecCCccEEEccccc
Q 020798 278 -----KVVQK-LEGHTD--PVISVA-SHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 278 -----~~~~~-~~~h~~--~v~~~~-~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..++. ++||.+ .|.++. |-|...++++|| .-|.|.||+.+.
T Consensus 376 ~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGS--DCGhIFiW~K~t 425 (559)
T KOG1334|consen 376 SSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGS--DCGHIFIWDKKT 425 (559)
T ss_pred CcchhhccchhhcccccccccceeeeccCccceEEecC--ccceEEEEecch
Confidence 22334 789964 577776 468889999987 468999999753
No 232
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=1.5e-13 Score=118.82 Aligned_cols=200 Identities=21% Similarity=0.199 Sum_probs=132.8
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCC---ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE-EEeC
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSAD---KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV-SASD 93 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d---~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~-~~~~ 93 (321)
.+..|...+.+++|+|||+.|+..+.+ ..+.+|++.... . ..+....+.....+|+|+|+.|+ +.+.
T Consensus 198 ~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~------~---~~l~~~~g~~~~~~~SpDG~~l~~~~s~ 268 (433)
T PRK04922 198 TILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ------R---ELVASFRGINGAPSFSPDGRRLALTLSR 268 (433)
T ss_pred EeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC------E---EEeccCCCCccCceECCCCCEEEEEEeC
Confidence 345567789999999999999987643 368888775321 1 11222233345789999998775 4455
Q ss_pred CC--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CCc--EEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 94 DK--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DET--VRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 94 d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
++ .|.+||+.+++. ..+..+.......+|+|||++|+.++. +|. |+++|+.+++... +..+.......+|+|+
T Consensus 269 ~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpD 346 (433)
T PRK04922 269 DGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPD 346 (433)
T ss_pred CCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCC
Confidence 55 599999988764 445555555567899999998876653 444 7777776665332 3233344557899999
Q ss_pred CCEEEEEeCCC---eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC---CeEEEEeCCC
Q 020798 169 GTMIVTSSYDG---LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD---NTLRLWNYST 231 (321)
Q Consensus 169 ~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d---~~i~i~d~~~ 231 (321)
|+.++..+.++ .|.+||+.+++.. .+... .......|+|+|++++..+.+ ..|.++++..
T Consensus 347 G~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~--~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g 412 (433)
T PRK04922 347 GKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPG--SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG 412 (433)
T ss_pred CCEEEEEECCCCceeEEEEECCCCCeE-ECCCC--CCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 99888765433 6899999877643 22221 123456899999988776653 3577777743
No 233
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.64 E-value=1.3e-13 Score=113.83 Aligned_cols=197 Identities=21% Similarity=0.349 Sum_probs=133.7
Q ss_pred CCCCEEEEEeCCCcEEEEecCCcceeeee----ecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEeCCC
Q 020798 83 SDSRFLVSASDDKTIRLWDVPTATCLKTL----IGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLPAHS 157 (321)
Q Consensus 83 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 157 (321)
+.+--++.|-..|.+.+.|....+..+.+ .--...++|+.|-|.+ ..|+.+-.+|.+++||..- ....
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~-------~~~~ 255 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEI-------VCGA 255 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccc-------cccC
Confidence 45556778888899999886553221111 1123678999998854 5677788899999998621 1111
Q ss_pred CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEE
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT 237 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~ 237 (321)
.+ .+....+++..+.....-+.. +..++..+... ...+...+|+|||++|++.+.||.++|||..+.+++..
T Consensus 256 t~-p~~~~~k~~~~f~i~t~ksk~------~rNPv~~w~~~-~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~ 327 (636)
T KOG2394|consen 256 TA-PSYQALKDGDQFAILTSKSKK------TRNPVARWHIG-EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGV 327 (636)
T ss_pred CC-CcccccCCCCeeEEeeeeccc------cCCccceeEec-cccccceeEcCCCceEEEEecCceEEEeeccHHHHHHH
Confidence 11 111223455555433221110 00112222212 23678899999999999999999999999998887766
Q ss_pred EeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecC
Q 020798 238 YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297 (321)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p 297 (321)
++..-+...|+ + +.|||+++++|++|--|.||.+..++++.+-.+|.+.|..|+|.|
T Consensus 328 mkSYFGGLLCv--c-WSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 328 MKSYFGGLLCV--C-WSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred HHhhccceEEE--E-EcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 65444444333 3 348999999999999999999999999999999999999999985
No 234
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.63 E-value=1.6e-11 Score=102.90 Aligned_cols=243 Identities=16% Similarity=0.271 Sum_probs=157.6
Q ss_pred cEEEEEECCCCCEEEEEeC----CCcEEEEecCCc--c--eeeeeecCcccEEEEEECCCCCEEEEee-CCCcEEEEecC
Q 020798 75 GVSDLVFSSDSRFLVSASD----DKTIRLWDVPTA--T--CLKTLIGHTNYVFCVNFNPQSNMIVSGA-FDETVRIWDVK 145 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~--~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~ 145 (321)
...-++++|++++|++... ++.|..|.+... + .+............++++|++++|+++. .+|.+.++++.
T Consensus 38 ~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~ 117 (345)
T PF10282_consen 38 NPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLD 117 (345)
T ss_dssp SECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEcc
Confidence 4566889999999988866 568989887654 2 2223332344456789999999988876 58999999997
Q ss_pred C-CEEEEE---Ee----------CCCCCeeEEEEccCCCEEEEEe-CCCeEEEEeCCCCc--e--eeeeccCCCCCeEEE
Q 020798 146 T-GKCLKV---LP----------AHSDPVTAVDFNRDGTMIVTSS-YDGLCRIWDASTGH--C--MKTLIDDENPPVSFV 206 (321)
Q Consensus 146 ~-~~~~~~---~~----------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~--~--~~~~~~~~~~~~~~~ 206 (321)
. +..... +. .......++.++|+++++++.. ....|.+|++.... . ...+..........+
T Consensus 118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~ 197 (345)
T PF10282_consen 118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHL 197 (345)
T ss_dssp TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEE
T ss_pred CCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEE
Confidence 6 443222 11 1124467899999999877765 45689999886543 2 122333455667899
Q ss_pred EEccCCCEEEEEe-cCCeEEEEeCC--CCcE--EEEEecc----CCceeEEEeEEEecCCeEEEEe-CCCCeEEEEEccc
Q 020798 207 KFSPNGKFILVGT-LDNTLRLWNYS--TGKI--LKTYTGH----TNSKYCISSTFSVTNGKYIVSG-SEDSCVYLWELQS 276 (321)
Q Consensus 207 ~~~~~g~~l~~~~-~d~~i~i~d~~--~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~ 276 (321)
.|+|+++++.+.. .++.|.+|++. +++. +...... .... ........+||++|.+. -..+.|.+|++..
T Consensus 198 ~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~ 276 (345)
T PF10282_consen 198 AFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGEN-APAEIAISPDGRFLYVSNRGSNSISVFDLDP 276 (345)
T ss_dssp EE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSS-SEEEEEE-TTSSEEEEEECTTTEEEEEEECT
T ss_pred EEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccC-CceeEEEecCCCEEEEEeccCCEEEEEEEec
Confidence 9999999987765 47789999987 4432 2222211 1111 12223345788877665 4677899999932
Q ss_pred --c--eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 277 --R--KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 277 --~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+ +.+..+......-+.++++|+|++|+++..++ +.|.+|+.+
T Consensus 277 ~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s-~~v~vf~~d 322 (345)
T PF10282_consen 277 ATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDS-NTVSVFDID 322 (345)
T ss_dssp TTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTT-TEEEEEEEE
T ss_pred CCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCC-CeEEEEEEe
Confidence 3 33444443344469999999999999988764 578888764
No 235
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.62 E-value=6.9e-12 Score=97.38 Aligned_cols=235 Identities=16% Similarity=0.318 Sum_probs=153.6
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE-EEeCC------CcEE
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV-SASDD------KTIR 98 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~-~~~~d------~~i~ 98 (321)
..+++|+.|..-++++. |...++|.+..... ......+..++.-+..---.++|+ .|+.+ +.+.
T Consensus 8 ~lsvs~NQD~ScFava~-~~Gfriyn~~P~ke--------~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkvi 78 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVAT-DTGFRIYNCDPFKE--------SASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVI 78 (346)
T ss_pred eeEEEEccCCceEEEEe-cCceEEEecCchhh--------hhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEE
Confidence 34589999988888876 55578897653211 011111122211111111234444 44433 4699
Q ss_pred EEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC-CCEEEEEEeCCCCCeeEEEEccCC--CEEEE-
Q 020798 99 LWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK-TGKCLKVLPAHSDPVTAVDFNRDG--TMIVT- 174 (321)
Q Consensus 99 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~-~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~- 174 (321)
|||=...+++..+. ...+|..+.+.++ .|++. ..+.|++|... +.+.+..+.....|=--++..|.. ..|+.
T Consensus 79 IWDD~k~~~i~el~-f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafP 154 (346)
T KOG2111|consen 79 IWDDLKERCIIELS-FNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFP 154 (346)
T ss_pred EEecccCcEEEEEE-eccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcC
Confidence 99966666665554 4667889998875 34443 35789999886 344444444333222234445543 34443
Q ss_pred EeCCCeEEEEeCCCCce-eeeeccCCCCCeEEEEEccCCCEEEEEecCCe-EEEEeCCCCcEEEEEeccCC--ceeEEEe
Q 020798 175 SSYDGLCRIWDASTGHC-MKTLIDDENPPVSFVKFSPNGKFILVGTLDNT-LRLWNYSTGKILKTYTGHTN--SKYCISS 250 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~--~~~~~~~ 250 (321)
|-.-|.|.+-|+...+. ...+...|...|.+++.+.+|..+++++..|+ |||||..++.++..+..... ..+++
T Consensus 155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~i-- 232 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCI-- 232 (346)
T ss_pred CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEE--
Confidence 34679999999976544 23455678889999999999999999999986 89999999999988864333 23443
Q ss_pred EEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 251 TFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
..+++..+||+.+..|+|.||.++.
T Consensus 233 -aFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 233 -AFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred -EeCCCccEEEEEcCCCeEEEEEeec
Confidence 3458899999999999999999865
No 236
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.60 E-value=4.7e-11 Score=94.66 Aligned_cols=271 Identities=13% Similarity=0.272 Sum_probs=175.3
Q ss_pred CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC---CcEEEEecCC--cce--eeeeecCcc
Q 020798 44 DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD---KTIRLWDVPT--ATC--LKTLIGHTN 116 (321)
Q Consensus 44 d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d---~~i~iwd~~~--~~~--~~~~~~~~~ 116 (321)
...|.+|++........ ...+-.+...++=|+|+|++++|.++-.+ |.|..|.++. ++. +........
T Consensus 15 s~gI~v~~ld~~~g~l~-----~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~ 89 (346)
T COG2706 15 SQGIYVFNLDTKTGELS-----LLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGS 89 (346)
T ss_pred CCceEEEEEeCcccccc-----hhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCC
Confidence 56788888764322111 11222345667889999999999887544 6677777764 442 122222233
Q ss_pred cEEEEEECCCCCEEEEeeC-CCcEEEEecCC-CEEEE--EEeCCCCC----------eeEEEEccCCCEEEEEe-CCCeE
Q 020798 117 YVFCVNFNPQSNMIVSGAF-DETVRIWDVKT-GKCLK--VLPAHSDP----------VTAVDFNRDGTMIVTSS-YDGLC 181 (321)
Q Consensus 117 ~v~~~~~~~~~~~l~~~~~-dg~i~~wd~~~-~~~~~--~~~~~~~~----------v~~~~~~~~~~~l~~~~-~dg~i 181 (321)
....+++++++++++++.. .|.|.++.++. |.... .+..|... +....+.|++++++++. ....|
T Consensus 90 ~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri 169 (346)
T COG2706 90 PPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI 169 (346)
T ss_pred CCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence 3477899999999988764 57899998865 33221 12234333 78899999999988875 34578
Q ss_pred EEEeCCCCceeee--eccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCC-cEEEEEec-------cCCceeEEEe
Q 020798 182 RIWDASTGHCMKT--LIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTG-KILKTYTG-------HTNSKYCISS 250 (321)
Q Consensus 182 ~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~-~~~~~~~~-------~~~~~~~~~~ 250 (321)
.+|++..++.... .....+.....+.|+|++++..+.+ -+++|.+|..... ..+..++. ..+... .+.
T Consensus 170 ~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~-~aa 248 (346)
T COG2706 170 FLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNW-AAA 248 (346)
T ss_pred EEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCc-eeE
Confidence 9999987654221 1123445678899999999987766 4889999988763 22222221 122222 233
Q ss_pred EEEecCCeEEEEeC-CCCeEEEEEccc--ceE--EEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccccC
Q 020798 251 TFSVTNGKYIVSGS-EDSCVYLWELQS--RKV--VQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 251 ~~~~~~~~~l~~~~-~dg~i~vwd~~~--~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~~ 321 (321)
....+||++|.+.. ....|.+|.+.. +++ +.....+...-++..++|.+++|+++.+++| .|.+|..+++
T Consensus 249 Ihis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd-~i~vf~~d~~ 323 (346)
T COG2706 249 IHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSD-NITVFERDKE 323 (346)
T ss_pred EEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCC-cEEEEEEcCC
Confidence 44457899998764 234788887753 332 3333445555689999999999999998865 5888877654
No 237
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.59 E-value=3.1e-13 Score=105.32 Aligned_cols=266 Identities=17% Similarity=0.226 Sum_probs=160.5
Q ss_pred ccCCcccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcE
Q 020798 19 LNGHLRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
.....+++.+++|||||+ +|.+..-+-.|.+|.+..... ..++-.+..+..++|+|||++.+.++.-...
T Consensus 87 Ideg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~---------~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCk 157 (447)
T KOG4497|consen 87 IDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG---------YLLPHPKTNVKGYAFHPDGQFCAILSRRDCK 157 (447)
T ss_pred eccCCCcceeeeECCCcceEeeeecceeEEEEEEecccee---------EEecccccCceeEEECCCCceeeeeecccHH
Confidence 345578899999999996 555666788999998864221 1111223456789999999998877643221
Q ss_pred EEEec---CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 98 RLWDV---PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 98 ~iwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
..+++ .....++.+.-.+-....+.|+|||+.|+. ||---.-.+..+ ...-.+..++|+|.+++++.
T Consensus 158 dyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laV---------wd~~Leykv~aY-e~~lG~k~v~wsP~~qflav 227 (447)
T KOG4497|consen 158 DYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAV---------WDNVLEYKVYAY-ERGLGLKFVEWSPCNQFLAV 227 (447)
T ss_pred HHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEE---------ecchhhheeeee-eeccceeEEEeccccceEEe
Confidence 11111 112223333333344567889999887764 442111111111 12245677899999999999
Q ss_pred EeCCCeEEEEeCCC---------------Cc----------eee-----------------------------------e
Q 020798 175 SSYDGLCRIWDAST---------------GH----------CMK-----------------------------------T 194 (321)
Q Consensus 175 ~~~dg~i~~~d~~~---------------~~----------~~~-----------------------------------~ 194 (321)
|+.|+.+|+.+--+ .. .+. .
T Consensus 228 GsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~ 307 (447)
T KOG4497|consen 228 GSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHK 307 (447)
T ss_pred eccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeec
Confidence 99998877643110 00 000 0
Q ss_pred ec--c---CCCCCeEEEEEccCCCEEEEEec--CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC
Q 020798 195 LI--D---DENPPVSFVKFSPNGKFILVGTL--DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267 (321)
Q Consensus 195 ~~--~---~~~~~~~~~~~~~~g~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 267 (321)
+. . .....+..++|++|..++++-.. -+.+-+||++..++...+... .+ +......|....|+.+....
T Consensus 308 lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk-~p---iraf~WdP~~prL~vctg~s 383 (447)
T KOG4497|consen 308 LKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQK-HP---IRAFEWDPGRPRLVVCTGKS 383 (447)
T ss_pred ccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhc-cc---eeEEEeCCCCceEEEEcCCc
Confidence 00 0 00113456899999988877543 357999999887654444221 12 22233345555566666666
Q ss_pred eEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeec
Q 020798 268 CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308 (321)
Q Consensus 268 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d 308 (321)
.+++|.......+. ..+..-.|.++.|+.+|..++-.+.|
T Consensus 384 rLY~W~psg~~~V~-vP~~GF~i~~l~W~~~g~~i~l~~kD 423 (447)
T KOG4497|consen 384 RLYFWAPSGPRVVG-VPKKGFNIQKLQWLQPGEFIVLCGKD 423 (447)
T ss_pred eEEEEcCCCceEEe-cCCCCceeeeEEecCCCcEEEEEcCC
Confidence 79999987655443 23334679999999999999988765
No 238
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.58 E-value=6e-12 Score=108.87 Aligned_cols=219 Identities=17% Similarity=0.147 Sum_probs=137.8
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCC---CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEE-eeCCC--cEE
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDD---KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS-GAFDE--TVR 140 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg--~i~ 140 (321)
+.+..+...+...+|+|+|++|+.+... ..|++||+.+++.. .+..+...+.+++|+|+++.|+. .+.++ .|+
T Consensus 183 ~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~-~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~ 261 (417)
T TIGR02800 183 QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQRE-KVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIY 261 (417)
T ss_pred EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEECCCCCccEE
Confidence 3344556678889999999999877644 47999999887543 23334555667899999987764 44444 588
Q ss_pred EEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEE
Q 020798 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 141 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
+||+.++... .+..+........|+|+++.++..+. .+ .|.++|+.+++.. .+. ..........|+|+|++++.
T Consensus 262 ~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~-~~~~~~~~~~~spdg~~i~~ 338 (417)
T TIGR02800 262 VMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLT-FRGGYNASPSWSPDGDLIAF 338 (417)
T ss_pred EEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-Eee-cCCCCccCeEECCCCCEEEE
Confidence 9998876543 33344444567799999998876654 33 5778888766533 222 12233456789999999988
Q ss_pred EecCC---eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC---eEEEEEcccceEEEEecCCCCCeE
Q 020798 218 GTLDN---TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS---CVYLWELQSRKVVQKLEGHTDPVI 291 (321)
Q Consensus 218 ~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~h~~~v~ 291 (321)
+..++ .|.+||+.++... .+...... . .....+++++|+..+.++ .+++.+.. ++....+..+...+.
T Consensus 339 ~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~---~-~p~~spdg~~l~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~g~~~ 412 (417)
T TIGR02800 339 VHREGGGFNIAVMDLDGGGER-VLTDTGLD---E-SPSFAPNGRMILYATTRGGRGVLGLVSTD-GRFRARLPLGNGDVR 412 (417)
T ss_pred EEccCCceEEEEEeCCCCCeE-EccCCCCC---C-CceECCCCCEEEEEEeCCCcEEEEEEECC-CceeeECCCCCCCcC
Confidence 87765 7899998875443 22221111 1 112346787777665543 35555543 344444444444444
Q ss_pred EEEe
Q 020798 292 SVAS 295 (321)
Q Consensus 292 ~~~~ 295 (321)
..+|
T Consensus 413 ~~~w 416 (417)
T TIGR02800 413 EPAW 416 (417)
T ss_pred CCCC
Confidence 4444
No 239
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.58 E-value=6.8e-12 Score=108.77 Aligned_cols=221 Identities=13% Similarity=0.138 Sum_probs=139.9
Q ss_pred ccccccccEEEEEECCCCCEEEEEeCC---CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCC--cEEE
Q 020798 68 KFTGHEQGVSDLVFSSDSRFLVSASDD---KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDE--TVRI 141 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg--~i~~ 141 (321)
.+..+...+....|+|||+.|+..+.+ ..|.+||+.+++.. .+....+......|+|+|+.|+ +...++ .|++
T Consensus 193 ~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~-~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~ 271 (430)
T PRK00178 193 TLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE-QITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYV 271 (430)
T ss_pred EEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEE-EccCCCCCcCCeEECCCCCEEEEEEccCCCceEEE
Confidence 344566778899999999998876543 36889999887643 2333333445688999999876 444444 6888
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 218 (321)
||+.+++.. .+..+........|+|+++.++..+. ++ .|+++|+.+++...... . ........|+|+|++++..
T Consensus 272 ~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~-~-~~~~~~~~~Spdg~~i~~~ 348 (430)
T PRK00178 272 MDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF-V-GNYNARPRLSADGKTLVMV 348 (430)
T ss_pred EECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-C-CCCccceEECCCCCEEEEE
Confidence 899877644 34445555667899999998776653 33 57777887765432221 1 1223356899999999876
Q ss_pred ecC-C--eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC---CeEEEEEcccceEEEEecCCCCCeEE
Q 020798 219 TLD-N--TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED---SCVYLWELQSRKVVQKLEGHTDPVIS 292 (321)
Q Consensus 219 ~~d-~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~h~~~v~~ 292 (321)
..+ + .|.++|+.+++... +... .... ...+ .+||+.++..+.+ ..|.++++.. .....+..+.+.+..
T Consensus 349 ~~~~~~~~l~~~dl~tg~~~~-lt~~-~~~~--~p~~-spdg~~i~~~~~~~g~~~l~~~~~~g-~~~~~l~~~~g~~~~ 422 (430)
T PRK00178 349 HRQDGNFHVAAQDLQRGSVRI-LTDT-SLDE--SPSV-APNGTMLIYATRQQGRGVLMLVSING-RVRLPLPTAQGEVRE 422 (430)
T ss_pred EccCCceEEEEEECCCCCEEE-ccCC-CCCC--CceE-CCCCCEEEEEEecCCceEEEEEECCC-CceEECcCCCCCcCC
Confidence 643 2 58889988776432 3221 1111 1223 4678777655433 3466777643 333445555566777
Q ss_pred EEecCC
Q 020798 293 VASHPT 298 (321)
Q Consensus 293 ~~~~p~ 298 (321)
.+|+|-
T Consensus 423 p~ws~~ 428 (430)
T PRK00178 423 PSWSPY 428 (430)
T ss_pred CccCCC
Confidence 788764
No 240
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.56 E-value=1.9e-10 Score=96.50 Aligned_cols=250 Identities=15% Similarity=0.272 Sum_probs=154.2
Q ss_pred ccEEEEEECCCCCEEEEecC----CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe-CCCcEE
Q 020798 24 RAISSVKFSHDGRLLASSSA----DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS-DDKTIR 98 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~----d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~-~d~~i~ 98 (321)
...+-++++|++++|.+..+ ++.|..|.+.... .....+............++++|++++|+++. .+|.|.
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~----g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~ 112 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDT----GTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVS 112 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTT----TEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCc----ceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEE
Confidence 34556889999999988766 5688888765311 11122222222334567799999999998886 488999
Q ss_pred EEecCC-cceeee--ee-----------cCcccEEEEEECCCCCEEEEee-CCCcEEEEecCCCE--EE--EEEe-CCCC
Q 020798 99 LWDVPT-ATCLKT--LI-----------GHTNYVFCVNFNPQSNMIVSGA-FDETVRIWDVKTGK--CL--KVLP-AHSD 158 (321)
Q Consensus 99 iwd~~~-~~~~~~--~~-----------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~--~~--~~~~-~~~~ 158 (321)
++++.. +..... .. .......++.++|+++++++.. ....|++|++.... .. ..+. ....
T Consensus 113 v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~ 192 (345)
T PF10282_consen 113 VFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGS 192 (345)
T ss_dssp EEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTS
T ss_pred EEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCC
Confidence 999976 332221 11 1234578899999999887754 34578999987654 21 2222 2334
Q ss_pred CeeEEEEccCCCEEEEEe-CCCeEEEEeCC--CCce--eeeecc---C--CCCCeEEEEEccCCCEEEEEe-cCCeEEEE
Q 020798 159 PVTAVDFNRDGTMIVTSS-YDGLCRIWDAS--TGHC--MKTLID---D--ENPPVSFVKFSPNGKFILVGT-LDNTLRLW 227 (321)
Q Consensus 159 ~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~--~~~~--~~~~~~---~--~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~ 227 (321)
....++|+|+++++++.. .+++|.++++. .+.. ...+.. . .......++++|+|++|.++. .++.|.+|
T Consensus 193 GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf 272 (345)
T PF10282_consen 193 GPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVF 272 (345)
T ss_dssp SEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEE
T ss_pred CCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEE
Confidence 568899999999776554 57889999887 3322 111111 1 112467899999999988876 46789999
Q ss_pred eCC--CCcE--EEEEeccCCceeEEEeEEEecCCeEEEEeC-CCCeEEEEEcc--cceEE
Q 020798 228 NYS--TGKI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGS-EDSCVYLWELQ--SRKVV 280 (321)
Q Consensus 228 d~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~--~~~~~ 280 (321)
++. ++++ +..+....... -. ....++|++|++++ .++.|.+|++. ++.+.
T Consensus 273 ~~d~~~g~l~~~~~~~~~G~~P--r~-~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~ 329 (345)
T PF10282_consen 273 DLDPATGTLTLVQTVPTGGKFP--RH-FAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLT 329 (345)
T ss_dssp EECTTTTTEEEEEEEEESSSSE--EE-EEE-TTSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred EEecCCCceEEEEEEeCCCCCc--cE-EEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEE
Confidence 983 3433 33333211112 22 22347888887665 66789999874 55543
No 241
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=1.1e-11 Score=107.31 Aligned_cols=220 Identities=15% Similarity=0.168 Sum_probs=137.1
Q ss_pred cccccccEEEEEECCCCCEEEEEeCC-C--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEE-eeCCCc--EEEE
Q 020798 69 FTGHEQGVSDLVFSSDSRFLVSASDD-K--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS-GAFDET--VRIW 142 (321)
Q Consensus 69 ~~~h~~~i~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~--i~~w 142 (321)
+..+...+....|+|||+.|+..+.+ + .|.+||+.+++.. .+...........|+|||+.|+. .+.++. |+++
T Consensus 213 l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~-~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~ 291 (448)
T PRK04792 213 LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE-KVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVV 291 (448)
T ss_pred eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeE-EecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEE
Confidence 34455678889999999988866543 3 5888898877642 22222223346789999998764 455664 7888
Q ss_pred ecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 143 DVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 143 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
|+.+++.. .+..+.......+|+|+++.++..+. ++ .+.++|+.+++... +... ........|+|+|++++..+
T Consensus 292 dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~-g~~~~~~~~SpDG~~l~~~~ 368 (448)
T PRK04792 292 DIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFE-GEQNLGGSITPDGRSMIMVN 368 (448)
T ss_pred ECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecC-CCCCcCeeECCCCCEEEEEE
Confidence 88877643 34444555677899999998776553 33 56667877665432 2111 12223468999999987765
Q ss_pred c-CC--eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeC-CCC--eEEEEEcccceEEEEecCCCCCeEEE
Q 020798 220 L-DN--TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS-EDS--CVYLWELQSRKVVQKLEGHTDPVISV 293 (321)
Q Consensus 220 ~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~ 293 (321)
. ++ .|.++|+.+++... +.... ... ...+ .++|+.|+..+ .+| .+++++. .++....+..+.+.+...
T Consensus 369 ~~~g~~~I~~~dl~~g~~~~-lt~~~-~d~--~ps~-spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p 442 (448)
T PRK04792 369 RTNGKFNIARQDLETGAMQV-LTSTR-LDE--SPSV-APNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSP 442 (448)
T ss_pred ecCCceEEEEEECCCCCeEE-ccCCC-CCC--CceE-CCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCC
Confidence 4 33 46667887776432 22211 111 1123 46777766543 333 3677776 455566676666677888
Q ss_pred EecCC
Q 020798 294 ASHPT 298 (321)
Q Consensus 294 ~~~p~ 298 (321)
+|+|-
T Consensus 443 ~Wsp~ 447 (448)
T PRK04792 443 AWSPF 447 (448)
T ss_pred ccCCC
Confidence 88874
No 242
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.55 E-value=5.9e-12 Score=108.92 Aligned_cols=197 Identities=21% Similarity=0.226 Sum_probs=130.4
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCC---ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE-EeC
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSAD---KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS-ASD 93 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d---~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~-~~~ 93 (321)
.+..+...+...+|+|||++|+.+..+ ..+.+|++.... ...+..+...+..++|+|+|+.|+. .+.
T Consensus 184 ~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~---------~~~~~~~~~~~~~~~~spDg~~l~~~~~~ 254 (417)
T TIGR02800 184 TITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ---------REKVASFPGMNGAPAFSPDGSKLAVSLSK 254 (417)
T ss_pred EeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC---------EEEeecCCCCccceEECCCCCEEEEEECC
Confidence 344566678899999999999887644 468888775321 1122234455667899999987764 444
Q ss_pred CC--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CC--cEEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 94 DK--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DE--TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 94 d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
++ .|.+||+.++.. ..+..+........|+|+++.|+..+. ++ .|+++|+.+++.. .+..+........|+|+
T Consensus 255 ~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spd 332 (417)
T TIGR02800 255 DGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPD 332 (417)
T ss_pred CCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCC
Confidence 44 588889887653 334444444456789999998876553 33 5888888766543 34444556778899999
Q ss_pred CCEEEEEeCCC---eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC---eEEEEe
Q 020798 169 GTMIVTSSYDG---LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN---TLRLWN 228 (321)
Q Consensus 169 ~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~---~i~i~d 228 (321)
++.++.++.++ .|.+||+.++.. ..+. .. .......|+|+|++|+....++ .+.+.+
T Consensus 333 g~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~-~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~ 395 (417)
T TIGR02800 333 GDLIAFVHREGGGFNIAVMDLDGGGE-RVLT-DT-GLDESPSFAPNGRMILYATTRGGRGVLGLVS 395 (417)
T ss_pred CCEEEEEEccCCceEEEEEeCCCCCe-EEcc-CC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEE
Confidence 99988887765 788999887543 2221 11 1233457999999988876543 344544
No 243
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.54 E-value=3.4e-12 Score=106.75 Aligned_cols=191 Identities=18% Similarity=0.276 Sum_probs=148.0
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC---CCCeeEEEE------cc--------------CCCEEEEEeCCCeE
Q 020798 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH---SDPVTAVDF------NR--------------DGTMIVTSSYDGLC 181 (321)
Q Consensus 125 ~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~---~~~v~~~~~------~~--------------~~~~l~~~~~dg~i 181 (321)
|...+++....||.+++||...++....+... .+..++..| +| +...++.|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 44568899999999999999988776655321 222333333 22 23467889999999
Q ss_pred EEEeCCCCceeeeec-cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEE
Q 020798 182 RIWDASTGHCMKTLI-DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260 (321)
Q Consensus 182 ~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (321)
.+|+...++....+. ..+..++..+.++.+-..|.+++.|+.+-.|+....+.++.+.+....... ....+|+..+
T Consensus 83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~s---l~is~D~~~l 159 (541)
T KOG4547|consen 83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSS---LCISPDGKIL 159 (541)
T ss_pred EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccce---EEEcCCCCEE
Confidence 999999988777765 456678888888888888999999999999999999999888776554332 3334789899
Q ss_pred EEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCC-----CceEEEEeecCCccEEEcccccC
Q 020798 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPT-----ENIIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~-----~~~l~s~~~d~~~~i~iw~~~~~ 321 (321)
++++ +.|++||+++.+.+..+.||.++|++++|--+ |.++.++. +..+-|.+|-.++|
T Consensus 160 ~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa-~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 160 LTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSA-AAERGITVWVVEKE 222 (541)
T ss_pred Eecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecc-ccccceeEEEEEcc
Confidence 8886 67999999999999999999999999999877 67777653 34566888887653
No 244
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.54 E-value=4.6e-13 Score=118.58 Aligned_cols=192 Identities=20% Similarity=0.282 Sum_probs=147.4
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccc----cEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQ----GVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~----~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
..+.-+...++.+..+..+.+|+....... ........ ...-+-++++.-++++|+.-+.|.+|+...
T Consensus 93 ~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~--------~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~ 164 (967)
T KOG0974|consen 93 AKLFEENKKIALVTSRNSLLIRDSKNSSVL--------SKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHE 164 (967)
T ss_pred cchhhhcceEEEEEcCceEEEEecccCcee--------hhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccc
Confidence 445556778888888999999987543211 11111111 122234566667899999999999999874
Q ss_pred cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE-EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEE
Q 020798 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK-VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183 (321)
Q Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 183 (321)
......+.+|.+.++.+.++.+|+++++.+.|..+++|++.+.+... ..-+|...++.+.|.|+ .+++++.|.++++
T Consensus 165 dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrv 242 (967)
T KOG0974|consen 165 DNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRV 242 (967)
T ss_pred cCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEE
Confidence 44334688999999999999999999999999999999999877554 55689999999999998 8999999999999
Q ss_pred EeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 020798 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 184 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~ 231 (321)
|+.... ....+.......+..++.+++...+++++.|+.+++||+..
T Consensus 243 W~~~~~-~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 243 WGVNGT-QLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred Eecccc-eehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 976543 23344444456788899999999999999999999999753
No 245
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.53 E-value=1.7e-11 Score=106.36 Aligned_cols=198 Identities=18% Similarity=0.177 Sum_probs=126.2
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCC---ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE-EeCC
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSAD---KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS-ASDD 94 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d---~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~-~~~d 94 (321)
+..+...+...+|+|||++|+..+.+ ..|.+|++.... .. .+....+.+....|+|+|+.|+. ...+
T Consensus 194 l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~------~~---~l~~~~g~~~~~~~SpDG~~la~~~~~~ 264 (430)
T PRK00178 194 LLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR------RE---QITNFEGLNGAPAWSPDGSKLAFVLSKD 264 (430)
T ss_pred EecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC------EE---EccCCCCCcCCeEECCCCCEEEEEEccC
Confidence 44566788999999999999876543 357777765321 11 12222233456899999998874 4445
Q ss_pred C--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CC--cEEEEecCCCEEEEEEeCCCCCeeEEEEccCC
Q 020798 95 K--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DE--TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDG 169 (321)
Q Consensus 95 ~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (321)
+ .|.+||+.+++. ..+..+........|+|+++.++..+. ++ .|+++|+.+++..... ..........|+|++
T Consensus 265 g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt-~~~~~~~~~~~Spdg 342 (430)
T PRK00178 265 GNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVT-FVGNYNARPRLSADG 342 (430)
T ss_pred CCceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCCccceEECCCC
Confidence 5 588889987764 334445555566789999998765543 33 5777888777643322 222233457899999
Q ss_pred CEEEEEeCC-C--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC---CeEEEEeCC
Q 020798 170 TMIVTSSYD-G--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD---NTLRLWNYS 230 (321)
Q Consensus 170 ~~l~~~~~d-g--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d---~~i~i~d~~ 230 (321)
+.++....+ + .+.++|+.+++.. .+.. .. ......|+|+|++++..+.+ ..|.++++.
T Consensus 343 ~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~-~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 343 KTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TS-LDESPSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred CEEEEEEccCCceEEEEEECCCCCEE-EccC-CC-CCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 988776643 3 5788898876542 2221 11 12245899999998876643 246666654
No 246
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.53 E-value=1.2e-12 Score=102.55 Aligned_cols=213 Identities=15% Similarity=0.254 Sum_probs=154.2
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
.+.+.++||.+.|++...-|..+-+.+.+.|.++++|-..+.. ...+. + ...-..+++++.+.++.+.|+.|-.
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~--q~wps--I--~~~mP~~~~~~~y~~e~~~L~vg~~ 88 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSG--QYWPS--I--YHYMPSPCSAMEYVSESRRLYVGQD 88 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEecccc--ccCch--h--hhhCCCCceEeeeeccceEEEEEEe
Confidence 3566789999999999888888889999999999999543211 11111 1 1112356889999999999999999
Q ss_pred CCcEEEEecC----CcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC------------------------
Q 020798 94 DKTIRLWDVP----TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK------------------------ 145 (321)
Q Consensus 94 d~~i~iwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~------------------------ 145 (321)
.|++.-+.+. +-...+....|...+..+-|+....++++++.|..+..--.+
T Consensus 89 ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~ 168 (404)
T KOG1409|consen 89 NGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYA 168 (404)
T ss_pred cceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEE
Confidence 9999888653 333445556788888888887777777777776544321111
Q ss_pred -----------------CCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEE
Q 020798 146 -----------------TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKF 208 (321)
Q Consensus 146 -----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 208 (321)
.-..+..+..|.+.+.+++|.|....+.+|..|..+.+||+-..+-.......+...+..+..
T Consensus 169 fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~ 248 (404)
T KOG1409|consen 169 FVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSY 248 (404)
T ss_pred EecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhh
Confidence 112334556788999999999999999999999999999997554444334445555666666
Q ss_pred ccCCCEEEEEecCCeEEEEeCCCC
Q 020798 209 SPNGKFILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 209 ~~~g~~l~~~~~d~~i~i~d~~~~ 232 (321)
.+.-+.+++++.||.|.+|++...
T Consensus 249 ~~~t~~l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 249 AQHTRQLISCGEDGGIVVWNMNVK 272 (404)
T ss_pred hhhheeeeeccCCCeEEEEeccce
Confidence 667778999999999999998653
No 247
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.51 E-value=1.5e-11 Score=105.48 Aligned_cols=288 Identities=13% Similarity=0.148 Sum_probs=193.7
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCC-------CCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSD-------STPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~-------~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
.....|++|+.+..++|.|+.||.+++..+....... ..+..--+.+.||++.|..+.|+.+.+.|-+...+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 3567899999999999999999999998765422110 011112356789999999999999988999999999
Q ss_pred cEEEEecCCcceeeee--ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEE
Q 020798 96 TIRLWDVPTATCLKTL--IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
-|.+|-+.++.....+ ....+.|.+++|+.+|..+.....||.|.+=.+...+.-. -.........+.|++|.+.++
T Consensus 94 lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwg-KeLkg~~l~hv~ws~D~~~~L 172 (1189)
T KOG2041|consen 94 LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWG-KELKGQLLAHVLWSEDLEQAL 172 (1189)
T ss_pred eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecc-hhcchheccceeecccHHHHH
Confidence 9999998777543332 2345678899999999999988899988776554433211 111122345688999999888
Q ss_pred EEeCCCeEEEEeCCCCceee-------e---eccCCCCCeEEEEE--------ccCCCEEEEEecCCeEEEEeCCCCcEE
Q 020798 174 TSSYDGLCRIWDASTGHCMK-------T---LIDDENPPVSFVKF--------SPNGKFILVGTLDNTLRLWNYSTGKIL 235 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~~~~~~-------~---~~~~~~~~~~~~~~--------~~~g~~l~~~~~d~~i~i~d~~~~~~~ 235 (321)
.+-.+|.+.++|-.....++ . ........+..+.| -|+...++++..+|.+.+..-.+....
T Consensus 173 f~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~P 252 (1189)
T KOG2041|consen 173 FKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEP 252 (1189)
T ss_pred hhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCC
Confidence 88888999999865432110 0 11111112333333 357888999999998888764433222
Q ss_pred EEEeccCCceeEEEeEEEecCCeEEEEeCCCC---------eEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 236 KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS---------CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
..+. + +...+...| .++|..||.++.+. .|.+|.. -++.+..++.....|++++|-..|..+|-+-
T Consensus 253 vv~d--t-gm~~vgakW-nh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~Av 327 (1189)
T KOG2041|consen 253 VVVD--T-GMKIVGAKW-NHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIAV 327 (1189)
T ss_pred eEEe--c-ccEeeccee-cCCCcEEEEccCcccccCccccceEEEecc-chhheEEEecCCceeeeeEEcCCceEEEEEe
Confidence 2221 1 122233334 47899999887542 4555553 4666777887888999999998888888763
Q ss_pred ecCCccEEEcccc
Q 020798 307 LDNDRTVKIWTQE 319 (321)
Q Consensus 307 ~d~~~~i~iw~~~ 319 (321)
|+.|.+=++.
T Consensus 328 ---dsfiyfanIR 337 (1189)
T KOG2041|consen 328 ---DSFIYFANIR 337 (1189)
T ss_pred ---cceEEEEeec
Confidence 4566655443
No 248
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=2.3e-11 Score=104.51 Aligned_cols=208 Identities=17% Similarity=0.145 Sum_probs=123.5
Q ss_pred ccCCcccEEEEEECCCCCEE---EEecCCce--EEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 19 LNGHLRAISSVKFSHDGRLL---ASSSADKT--LLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l---~~~~~d~~--v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
+........+.+|||||+.+ ++...++. |.+.++... ....+.. ..+.....+|+|||+.|+..+.
T Consensus 180 lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g------~~~~lt~---~~g~~~~p~wSPDG~~Laf~s~ 250 (428)
T PRK01029 180 LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENP------AGKKILA---LQGNQLMPTFSPRKKLLAFISD 250 (428)
T ss_pred cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCC------CceEeec---CCCCccceEECCCCCEEEEEEC
Confidence 34445567788999999752 24444444 444444321 1112222 2334456899999998876543
Q ss_pred -CC--c--EEEEecCCcc--eeeeee-cCcccEEEEEECCCCCEEEEee-CCCcEEEE--ecCC-CEEEEEEeCCCCCee
Q 020798 94 -DK--T--IRLWDVPTAT--CLKTLI-GHTNYVFCVNFNPQSNMIVSGA-FDETVRIW--DVKT-GKCLKVLPAHSDPVT 161 (321)
Q Consensus 94 -d~--~--i~iwd~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~w--d~~~-~~~~~~~~~~~~~v~ 161 (321)
+| . +.+|++..+. ....+. .........+|+|||+.|+..+ .+|...+| ++.. +.....+..+...+.
T Consensus 251 ~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~ 330 (428)
T PRK01029 251 RYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSS 330 (428)
T ss_pred CCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCcc
Confidence 23 2 3446765421 122222 2223345678999999877654 45654444 4432 222334444445667
Q ss_pred EEEEccCCCEEEEEeCC---CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec---CCeEEEEeCCCCcEE
Q 020798 162 AVDFNRDGTMIVTSSYD---GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL---DNTLRLWNYSTGKIL 235 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~---d~~i~i~d~~~~~~~ 235 (321)
...|+|+|+.++..+.+ ..|.+||+.+++... +.. ....+....|+|+|++|+.... ...|.++|+..++..
T Consensus 331 ~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~-~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~ 408 (428)
T PRK01029 331 CPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTT-SPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTR 408 (428)
T ss_pred ceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccC-CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 88999999988876543 368999998876533 222 2234566889999998876443 346888888776644
Q ss_pred EE
Q 020798 236 KT 237 (321)
Q Consensus 236 ~~ 237 (321)
..
T Consensus 409 ~L 410 (428)
T PRK01029 409 KI 410 (428)
T ss_pred Ee
Confidence 33
No 249
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.50 E-value=2.5e-11 Score=105.10 Aligned_cols=205 Identities=18% Similarity=0.202 Sum_probs=125.2
Q ss_pred cCCcccEEEEEECCCCCEEEEecCC-c--eEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE-EeCCC
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSAD-K--TLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS-ASDDK 95 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d-~--~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~-~~~d~ 95 (321)
..+...+.+.+|+|||++|+..+.+ + .|.++++.... ...+..+. +......|+|||+.|+. ...++
T Consensus 214 ~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~------~~~lt~~~---g~~~~~~wSPDG~~La~~~~~~g 284 (448)
T PRK04792 214 LRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV------REKVTSFP---GINGAPRFSPDGKKLALVLSKDG 284 (448)
T ss_pred ecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCC------eEEecCCC---CCcCCeeECCCCCEEEEEEeCCC
Confidence 3445577889999999998876543 3 46666664321 11122222 22346799999998764 45566
Q ss_pred c--EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CC--cEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC
Q 020798 96 T--IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DE--TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 96 ~--i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
. |.++|+.+++. ..+..+........|+||++.++..+. ++ .|+++|+.+++... +..........+|+|+|+
T Consensus 285 ~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~~~~~SpDG~ 362 (448)
T PRK04792 285 QPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNLGGSITPDGR 362 (448)
T ss_pred CeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCcCeeECCCCC
Confidence 4 77778877764 344445555667899999998765543 33 56777877765433 222222334578999999
Q ss_pred EEEEEeC-CC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC-C--eEEEEeCCCCcEEEEEe
Q 020798 171 MIVTSSY-DG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD-N--TLRLWNYSTGKILKTYT 239 (321)
Q Consensus 171 ~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d-~--~i~i~d~~~~~~~~~~~ 239 (321)
.++..+. ++ .|.++|+.+++.. .+. ... ......|+|+|+.|+....+ + .+.+++. +++....+.
T Consensus 363 ~l~~~~~~~g~~~I~~~dl~~g~~~-~lt-~~~-~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~ 433 (448)
T PRK04792 363 SMIMVNRTNGKFNIARQDLETGAMQ-VLT-STR-LDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLP 433 (448)
T ss_pred EEEEEEecCCceEEEEEECCCCCeE-Ecc-CCC-CCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECc
Confidence 8877654 34 4556788776532 222 111 12234799999998776543 3 3667775 444444443
No 250
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.49 E-value=5.6e-12 Score=105.18 Aligned_cols=247 Identities=16% Similarity=0.222 Sum_probs=166.7
Q ss_pred eeeeeccCCc--ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 14 TLTQTLNGHL--RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 14 ~~~~~~~~h~--~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
++...+.-|. ..|.-.-++.|-..++.--.|+.|.+-...+.-.. ..+ ...-.+++++.-..-|+.+
T Consensus 83 nLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~--------~RI---P~~GRDm~y~~~scDly~~ 151 (703)
T KOG2321|consen 83 NLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYR--------TRI---PKFGRDMKYHKPSCDLYLV 151 (703)
T ss_pred cceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeeee--------eec---CcCCccccccCCCccEEEe
Confidence 3334444453 34655666666666655566777765422211100 000 0112456666444445566
Q ss_pred eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe------CCCC-----Ce
Q 020798 92 SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP------AHSD-----PV 160 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~------~~~~-----~v 160 (321)
+....|+-++++.++.+..+....+.++++..++...+|++|+.+|.+-.||.+....+..+. .|.. .|
T Consensus 152 gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~sv 231 (703)
T KOG2321|consen 152 GSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSV 231 (703)
T ss_pred ecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcc
Confidence 666789999999999888887777899999999999999999999999999998765544432 2222 48
Q ss_pred eEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC--CCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 161 TAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN--GKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 161 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
+++.|+.+|-.+++|+.+|.+.+||+++.++...--..-..++..+.|.+. ++.++ ......++|||-.+|+....+
T Consensus 232 Tal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~-S~Dk~~~kiWd~~~Gk~~asi 310 (703)
T KOG2321|consen 232 TALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVV-SMDKRILKIWDECTGKPMASI 310 (703)
T ss_pred eEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEE-ecchHHhhhcccccCCceeec
Confidence 999999999999999999999999999877655443334457788888775 33343 344567999999999988776
Q ss_pred eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
..... . -..|+. +++.+++++..++.+..|=+..
T Consensus 311 Ept~~-l--ND~C~~-p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 311 EPTSD-L--NDFCFV-PGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred cccCC-c--Cceeee-cCCceEEEecCCCcceeEEccc
Confidence 54332 1 112333 5677788888888777766543
No 251
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.48 E-value=5.1e-11 Score=99.95 Aligned_cols=189 Identities=16% Similarity=0.228 Sum_probs=127.3
Q ss_pred CEE-EEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEE
Q 020798 128 NMI-VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFV 206 (321)
Q Consensus 128 ~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~ 206 (321)
+++ ++-..++.|.+.|..+.+.+..++.....-..+.++||++++++++.||.+.++|+.+.+.+.++... .....+
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G--~~~~~i 83 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG--GNPRGI 83 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S--SEEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC--CCcceE
Confidence 344 45567899999999999988888865544456789999999999999999999999999988877543 345789
Q ss_pred EEccCCCEEEEEe-cCCeEEEEeCCCCcEEEEEeccCC----ceeEEEeEEEecCCe-EEEEeCCCCeEEEEEcccceEE
Q 020798 207 KFSPNGKFILVGT-LDNTLRLWNYSTGKILKTYTGHTN----SKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 207 ~~~~~g~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
+++++|++++++. ..+.+.++|.++.++++.+..... ....+......+... ++++--..+.|-+.|....+.+
T Consensus 84 ~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~ 163 (369)
T PF02239_consen 84 AVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNL 163 (369)
T ss_dssp EE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCE
T ss_pred EEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccccc
Confidence 9999999998876 688999999999999887753211 111233333334444 6666666688888887665432
Q ss_pred --EEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 281 --QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 281 --~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..+. ......+..|+|+++++..+.... ..|-++|.+.
T Consensus 164 ~~~~i~-~g~~~~D~~~dpdgry~~va~~~s-n~i~viD~~~ 203 (369)
T PF02239_consen 164 KVTTIK-VGRFPHDGGFDPDGRYFLVAANGS-NKIAVIDTKT 203 (369)
T ss_dssp EEEEEE---TTEEEEEE-TTSSEEEEEEGGG-TEEEEEETTT
T ss_pred ceeeec-ccccccccccCcccceeeeccccc-ceeEEEeecc
Confidence 2333 345678899999999988876554 3677777653
No 252
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.45 E-value=1.6e-10 Score=99.31 Aligned_cols=223 Identities=17% Similarity=0.162 Sum_probs=130.0
Q ss_pred ccccccEEEEEECCCCCE--E-EEEeCCC--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CC----cE
Q 020798 70 TGHEQGVSDLVFSSDSRF--L-VSASDDK--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DE----TV 139 (321)
Q Consensus 70 ~~h~~~i~~~~~~~~~~~--l-~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg----~i 139 (321)
+.......+-.|+|||+. + ++...++ .|.+.++.+++. ..+....+......|+|||+.|+..+. +| .+
T Consensus 181 t~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~-~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~ 259 (428)
T PRK01029 181 TQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAG-KKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFI 259 (428)
T ss_pred ccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCc-eEeecCCCCccceEECCCCCEEEEEECCCCCcceeE
Confidence 333445567799999975 2 2443443 577778877753 233333444556899999998876542 22 34
Q ss_pred EEEecCCC---EEEEEEeCCCCCeeEEEEccCCCEEEEEe-CCCeEEEE--eCCC-CceeeeeccCCCCCeEEEEEccCC
Q 020798 140 RIWDVKTG---KCLKVLPAHSDPVTAVDFNRDGTMIVTSS-YDGLCRIW--DAST-GHCMKTLIDDENPPVSFVKFSPNG 212 (321)
Q Consensus 140 ~~wd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~--d~~~-~~~~~~~~~~~~~~~~~~~~~~~g 212 (321)
..|++..+ +...............+|+|||+.|+..+ .+|...+| ++.. +.....+. .....+....|+|+|
T Consensus 260 ~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt-~~~~~~~~p~wSPDG 338 (428)
T PRK01029 260 QSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLT-KKYRNSSCPAWSPDG 338 (428)
T ss_pred EEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEec-cCCCCccceeECCCC
Confidence 44676542 32222222223446789999999877665 45644444 4432 22222222 222345567899999
Q ss_pred CEEEEEecC---CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEE-eCC--CCeEEEEEcccceEEEEecCC
Q 020798 213 KFILVGTLD---NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS-GSE--DSCVYLWELQSRKVVQKLEGH 286 (321)
Q Consensus 213 ~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~--dg~i~vwd~~~~~~~~~~~~h 286 (321)
+.|+....+ ..|.+||+.+++....... ..... ...+.+||+.|+. +.. ...|+++|+..++... +...
T Consensus 339 ~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~-~~~~~---~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~-Lt~~ 413 (428)
T PRK01029 339 KKIAFCSVIKGVRQICVYDLATGRDYQLTTS-PENKE---SPSWAIDSLHLVYSAGNSNESELYLISLITKKTRK-IVIG 413 (428)
T ss_pred CEEEEEEcCCCCcEEEEEECCCCCeEEccCC-CCCcc---ceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecC
Confidence 998876543 4799999988875443322 11111 1223467877664 332 3568888987765433 3333
Q ss_pred CCCeEEEEecCCC
Q 020798 287 TDPVISVASHPTE 299 (321)
Q Consensus 287 ~~~v~~~~~~p~~ 299 (321)
.+.+...+|+|..
T Consensus 414 ~g~~~~p~Ws~~~ 426 (428)
T PRK01029 414 SGEKRFPSWGAFP 426 (428)
T ss_pred CCcccCceecCCC
Confidence 4456777888754
No 253
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.44 E-value=1.3e-12 Score=108.87 Aligned_cols=287 Identities=16% Similarity=0.272 Sum_probs=188.4
Q ss_pred eeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
.+.+.||...|..++--.+.+-+++++.|+++++|.+...-. +..+.....+++.|+.+|.++.|-.+-+++++ -||
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD-~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~ 804 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGD-EIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDG 804 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccC-ccccceeeeEhhhccCcccceeeeeccceeee--ccC
Confidence 356789999999988777778899999999999999865322 22233455678899999999999999888865 478
Q ss_pred cEEEEecCCcceeeeee---cC--cccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEEEEEe-----CCCCCeeEEE
Q 020798 96 TIRLWDVPTATCLKTLI---GH--TNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCLKVLP-----AHSDPVTAVD 164 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~---~~--~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-----~~~~~v~~~~ 164 (321)
-|.+||.-.++.+..+. .| .+.|.|+.- -+... ++-|+...+++++|.+..+-...++ ..+.-+.+++
T Consensus 805 giHlWDPFigr~Laq~~dapk~~a~~~ikcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~ia 883 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLEN-VDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIA 883 (1034)
T ss_pred cceeecccccchhHhhhcCcccCCCceeEeccc-CcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEE
Confidence 89999987766544321 12 223444321 12233 3444788999999999887555443 3345578999
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEE-EeCCCCcEEEEEeccCC
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRL-WNYSTGKILKTYTGHTN 243 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i-~d~~~~~~~~~~~~~~~ 243 (321)
..+.|+.++++-.+|.+.+.|.++|+.+..+.. .......++ .|..+.++....|.++.+ |...++...-..+....
T Consensus 884 Va~~GN~lAa~LSnGci~~LDaR~G~vINswrp-mecdllqla-apsdq~L~~saldHslaVnWhaldgimh~q~kpppe 961 (1034)
T KOG4190|consen 884 VADKGNKLAAALSNGCIAILDARNGKVINSWRP-MECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPE 961 (1034)
T ss_pred eccCcchhhHHhcCCcEEEEecCCCceeccCCc-ccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeeccCCCCc
Confidence 999999999999999999999999987665432 122222222 355566777777888888 87666544333322222
Q ss_pred ceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc----ceEEEEec--CCCCCeEEEEecCCCceEEEEeecCCccEEE
Q 020798 244 SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS----RKVVQKLE--GHTDPVISVASHPTENIIASGALDNDRTVKI 315 (321)
Q Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~i 315 (321)
+.. |...-|..|+++.....+.||--.. ...+.+++ ...+..++++--|-+.-+..|.. .|.|.+
T Consensus 962 pah-----flqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne--~G~IaL 1032 (1034)
T KOG4190|consen 962 PAH-----FLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNE--HGAIAL 1032 (1034)
T ss_pred chh-----hhhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCC--CCceee
Confidence 111 1111255567776666777875321 11222332 23456788888888777776763 466765
No 254
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.44 E-value=1.4e-10 Score=96.75 Aligned_cols=274 Identities=17% Similarity=0.311 Sum_probs=164.1
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE-----eC----
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA-----SD---- 93 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~-----~~---- 93 (321)
..++...++|++|+++|.+. +..++|++..... .+.... ...++++.|+|-+.+|.+= -.
T Consensus 34 ~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~--------~~lt~~--~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~ 102 (566)
T KOG2315|consen 34 SRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLK--------VVLCVE--LKKTYDLLFSPKGNYLLTWEPWAIYGPKNA 102 (566)
T ss_pred CCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCc--------EEEEec--cceeeeeeecccccccccccccccccCCCC
Confidence 44577889999999998875 6678888654321 111111 2267899999999988651 11
Q ss_pred -CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeE----------
Q 020798 94 -DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTA---------- 162 (321)
Q Consensus 94 -d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~---------- 162 (321)
.-.+.+|+++++.....+......-++..|+.|..+.+ =-..+.+++|++.+.+.+. -+.|...++.
T Consensus 103 ~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~a-rlv~nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp~~~ 180 (566)
T KOG2315|consen 103 SNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAA-RLVSNEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGPEPP 180 (566)
T ss_pred CCCceeeeeeccceehhheehhhhcCcccccccchhhhh-hhhcceEEEEecCCcccee-eeeeccceeeEEecCCCCCc
Confidence 23478999988543333322222225778888764322 2233567777765422111 1112233333
Q ss_pred ------------------------------------------EEEccCCCE-EEEE--eCC---------CeEEEEeCCC
Q 020798 163 ------------------------------------------VDFNRDGTM-IVTS--SYD---------GLCRIWDAST 188 (321)
Q Consensus 163 ------------------------------------------~~~~~~~~~-l~~~--~~d---------g~i~~~d~~~ 188 (321)
+.|++.|+- |+.+ .-| .++++.++..
T Consensus 181 ~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g 260 (566)
T KOG2315|consen 181 FVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQG 260 (566)
T ss_pred eEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecC
Confidence 344443331 1111 111 2344444442
Q ss_pred CceeeeeccCCCCCeEEEEEccCCCEEEEE--ecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeC--
Q 020798 189 GHCMKTLIDDENPPVSFVKFSPNGKFILVG--TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS-- 264 (321)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 264 (321)
..+...+ ....+|.++.|+|+|+.+++. -.-..+.|||++ ++++..+.. ++.. ..++.+.|++++.++
T Consensus 261 ~s~~V~L--~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e--gpRN---~~~fnp~g~ii~lAGFG 332 (566)
T KOG2315|consen 261 ESVSVPL--LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE--GPRN---TAFFNPHGNIILLAGFG 332 (566)
T ss_pred ceEEEec--CCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCCC--CCcc---ceEECCCCCEEEEeecC
Confidence 2222221 235678999999999887654 456789999976 556666542 2222 234557888877654
Q ss_pred -CCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeec----CCccEEEcccc
Q 020798 265 -EDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD----NDRTVKIWTQE 319 (321)
Q Consensus 265 -~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d----~~~~i~iw~~~ 319 (321)
-.|.+.|||+.+.+++.+++... -+-+.|+|||.+|.|+... -|..++||+..
T Consensus 333 NL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 333 NLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred CCCCceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 45889999999988888877543 3567899999999998632 24569999864
No 255
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.44 E-value=8.6e-12 Score=110.71 Aligned_cols=192 Identities=19% Similarity=0.277 Sum_probs=145.1
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCccc-----EEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNY-----VFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 79 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
..+..+.+.++.++.++.+-+||.........+. +.+. ..-+-.+++.-++++|+.-+.|.+|+....+....+
T Consensus 93 ~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~-~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l 171 (967)
T KOG0974|consen 93 AKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQ-SDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRL 171 (967)
T ss_pred cchhhhcceEEEEEcCceEEEEecccCceehhcC-CCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCccee
Confidence 3344566788888999999999987665443332 2221 112334566667899999999999998743333357
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~ 233 (321)
.+|++.+.++.++-+|+++++.+.|.++++|++.+.+......-.|...+..+.+.|. .+++++.|.+.++|+.. ++
T Consensus 172 ~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~ 248 (967)
T KOG0974|consen 172 KGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GT 248 (967)
T ss_pred cccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cc
Confidence 8999999999999999999999999999999999877655334456778888999998 89999999999999754 45
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
.+..+.+|.... +.....+++...++|++.|+.+++|++..
T Consensus 249 ~l~~y~~h~g~~--iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 249 QLEVYDEHSGKG--IWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred eehhhhhhhhcc--eeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 556777776532 33344456677889999999999999854
No 256
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.44 E-value=1.2e-10 Score=97.08 Aligned_cols=263 Identities=14% Similarity=0.232 Sum_probs=152.7
Q ss_pred EEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-----------CC
Q 020798 27 SSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-----------DK 95 (321)
Q Consensus 27 ~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-----------d~ 95 (321)
+-+.|||-|.||+|--.-| |.+|.- .....++.+. | .+|.-+.|||..+||+|=+. ..
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG--------~~f~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~ 282 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGG--------ESFDRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQ 282 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecC--------ccHHHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCc
Confidence 4589999999999987555 557732 1122233332 3 46888999999999998542 24
Q ss_pred cEEEEecCCcceeeeeecC--c-ccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 96 TIRLWDVPTATCLKTLIGH--T-NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~~--~-~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
.++|||+.+|...+.+... . ..-.-..||.|++++|.-.. ..|.+|+..+-.++-.-...-..|....|+|.++.|
T Consensus 283 ~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~ll 361 (698)
T KOG2314|consen 283 QLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLL 361 (698)
T ss_pred eEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceE
Confidence 7999999999877665431 1 12234578999998887655 568888865433222111222345556666665544
Q ss_pred EEEeC--C---CeEEEEeCCC----------------------Ccee---------------------eeec--------
Q 020798 173 VTSSY--D---GLCRIWDAST----------------------GHCM---------------------KTLI-------- 196 (321)
Q Consensus 173 ~~~~~--d---g~i~~~d~~~----------------------~~~~---------------------~~~~-------- 196 (321)
+-=.. + ..+.+..+.+ |..+ ..+.
T Consensus 362 AYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ 441 (698)
T KOG2314|consen 362 AYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEV 441 (698)
T ss_pred EEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCcee
Confidence 42110 0 0111111111 1000 0000
Q ss_pred cCCCCCeEEEEEccCCCEEEEEec---CCeEEEEeCCC-C---cEEEEEeccCCceeEEEeEEEecCCeEEEEe---CCC
Q 020798 197 DDENPPVSFVKFSPNGKFILVGTL---DNTLRLWNYST-G---KILKTYTGHTNSKYCISSTFSVTNGKYIVSG---SED 266 (321)
Q Consensus 197 ~~~~~~~~~~~~~~~g~~l~~~~~---d~~i~i~d~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~d 266 (321)
......+...+|.|.|..+++-+. ..++.+|.+.+ . +++..+.. ..+- ..+..|.|++++.+ +..
T Consensus 442 velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk----~~~N-~vfwsPkG~fvvva~l~s~~ 516 (698)
T KOG2314|consen 442 VELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK----KFAN-TVFWSPKGRFVVVAALVSRR 516 (698)
T ss_pred eecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc----cccc-eEEEcCCCcEEEEEEecccc
Confidence 011123556788999988776443 34788887763 2 23333321 2222 34555788888765 457
Q ss_pred CeEEEEEcccceEEE-EecCCCCCeEEEEecCCCceEEEEee
Q 020798 267 SCVYLWELQSRKVVQ-KLEGHTDPVISVASHPTENIIASGAL 307 (321)
Q Consensus 267 g~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~~~ 307 (321)
|.+.++|+....+.. ....|. ..+.+.|.|.|+|+++++.
T Consensus 517 g~l~F~D~~~a~~k~~~~~eh~-~at~veWDPtGRYvvT~ss 557 (698)
T KOG2314|consen 517 GDLEFYDTDYADLKDTASPEHF-AATEVEWDPTGRYVVTSSS 557 (698)
T ss_pred cceEEEecchhhhhhccCcccc-ccccceECCCCCEEEEeee
Confidence 889999987422211 112233 4588999999999999863
No 257
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.44 E-value=8.2e-11 Score=90.56 Aligned_cols=265 Identities=15% Similarity=0.165 Sum_probs=161.4
Q ss_pred CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC---CCC-EEEEEeCCCcEEEEecCCcceeeeeecC-----
Q 020798 44 DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS---DSR-FLVSASDDKTIRLWDVPTATCLKTLIGH----- 114 (321)
Q Consensus 44 d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~---~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~----- 114 (321)
-|.+.+|++.+..... ...++ . .....+..+.|.. +|. .++-+-.+|.|.++..........+.+-
T Consensus 45 ~Gkl~Lys~~d~~~~~---l~~~q-~-~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki 119 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSP---LDTLQ-C-TDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKI 119 (339)
T ss_pred ccceEEEeecccccCc---cceee-e-ecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhh
Confidence 4567778776543211 11111 1 1234567777763 455 4566677889999876443322222211
Q ss_pred -cccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE--EEeCCCCCeeEEEEccC-CCEEEEEeCCCeEEEEeCCC-C
Q 020798 115 -TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK--VLPAHSDPVTAVDFNRD-GTMIVTSSYDGLCRIWDAST-G 189 (321)
Q Consensus 115 -~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~-~ 189 (321)
.....++.|++.+..++++..+|.+.+-+........ .++.|+-+++...|+.. .+.+.+|+.|+.+..||+|. +
T Consensus 120 ~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~ 199 (339)
T KOG0280|consen 120 SVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK 199 (339)
T ss_pred hheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc
Confidence 1134578889989999999999999866655554433 77889999999999864 35788999999999999993 3
Q ss_pred ceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCC-CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC
Q 020798 190 HCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYST-GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267 (321)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 267 (321)
..+..-...+...|.++.-+| .+.++++|+.|..|++||.++ ++++..-.. .+.++.+.- .+.....++.++--.
T Consensus 200 ~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v-~GGVWRi~~--~p~~~~~lL~~CMh~ 276 (339)
T KOG0280|consen 200 TFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKV-GGGVWRIKH--HPEIFHRLLAACMHN 276 (339)
T ss_pred ceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCcc-ccceEEEEe--cchhhhHHHHHHHhc
Confidence 333332334556677776665 678999999999999999984 455543322 234444322 111222222233333
Q ss_pred eEEEEEcccce-----EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEE-Ecc
Q 020798 268 CVYLWELQSRK-----VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK-IWT 317 (321)
Q Consensus 268 ~i~vwd~~~~~-----~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~-iw~ 317 (321)
-.+|-+.+... .....+.|.+=...-.|......|||++.= |+.++ +|=
T Consensus 277 G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFY-Dk~~~~~Wl 331 (339)
T KOG0280|consen 277 GAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFY-DKKIRQLWL 331 (339)
T ss_pred CceEEEecccccchheeeeccccccceeeccccccccceeeeeecc-ccceeeeee
Confidence 34555554332 223345566556666675556789998753 45544 773
No 258
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.42 E-value=6.1e-10 Score=93.50 Aligned_cols=191 Identities=19% Similarity=0.329 Sum_probs=143.8
Q ss_pred CCCCEEEEEeCCCcEEEEecCCcceeeeeec---CcccEEEEEE------CC--------------CCCEEEEeeCCCcE
Q 020798 83 SDSRFLVSASDDKTIRLWDVPTATCLKTLIG---HTNYVFCVNF------NP--------------QSNMIVSGAFDETV 139 (321)
Q Consensus 83 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~------~~--------------~~~~l~~~~~dg~i 139 (321)
|...++|....||.+++|+...++....+.. -++...+..| +| +-..++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 4567899999999999999988875443321 1222222222 22 23467778889999
Q ss_pred EEEecCCCEEEEEEe--CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEE
Q 020798 140 RIWDVKTGKCLKVLP--AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
.+|+...++....+. .|.++|.++.++.+-..|.+++.|+.+..|+.......+... .....+..+.++|||..+++
T Consensus 83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~-~~~~~~~sl~is~D~~~l~~ 161 (541)
T KOG4547|consen 83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWK-EQKPLVSSLCISPDGKILLT 161 (541)
T ss_pred EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeec-cCCCccceEEEcCCCCEEEe
Confidence 999999998777664 688999999999888899999999999999998877665553 44566888999999999988
Q ss_pred EecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe--cCCeEEEE-eCCCCeEEEEEccc
Q 020798 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV--TNGKYIVS-GSEDSCVYLWELQS 276 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~-~~~dg~i~vwd~~~ 276 (321)
++ ++|++||+.+.+.+..|.+|.+++.++.+.... ..|.++++ ...+.-+.+|-+..
T Consensus 162 as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 162 AS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred cc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 75 589999999999999999999988777655431 12455554 44556677887654
No 259
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.42 E-value=1e-12 Score=122.35 Aligned_cols=195 Identities=14% Similarity=0.296 Sum_probs=153.9
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 152 (321)
..|.++.-+|...+.++|+.||.+++|....++.+.... +-...+..+.|+.+|+.+..+..||.+.+|... .++...
T Consensus 2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s 2287 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTS 2287 (2439)
T ss_pred CceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccceec
Confidence 456777778888899999999999999987776554432 223778889999999999999999999999986 556667
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEe---CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSS---YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
.++|+....++.|-. ..+++++ .++.+.+||.--.....-+-..|...++++++.|..+.|++|+.+|.+.+||+
T Consensus 2288 ~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~ 2365 (2439)
T KOG1064|consen 2288 WQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDI 2365 (2439)
T ss_pred cccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeeh
Confidence 788998888888875 5566654 56789999975332212222456778899999999999999999999999999
Q ss_pred CCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec
Q 020798 230 STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE 284 (321)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 284 (321)
+..++++.++.- ....++++|+..|.++||++....+++.+.
T Consensus 2366 rqrql~h~~~~~-------------~~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2366 RQRQLRHTFQAL-------------DTREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred HHHHHHHHhhhh-------------hhhheeeccCcccceEEEEccccchhhcCc
Confidence 988877776531 145689999999999999998877776654
No 260
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.41 E-value=9.9e-09 Score=84.52 Aligned_cols=232 Identities=13% Similarity=0.184 Sum_probs=138.0
Q ss_pred ECCCCCEEEEEeC----------CCcEEEEecCCcceeeeeecC-------cccEEEEEECCCCCEEEEee-C-CCcEEE
Q 020798 81 FSSDSRFLVSASD----------DKTIRLWDVPTATCLKTLIGH-------TNYVFCVNFNPQSNMIVSGA-F-DETVRI 141 (321)
Q Consensus 81 ~~~~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~-~-dg~i~~ 141 (321)
++||++.|+.+.. +..|.+||..+.+....+..- ......++++|||++++... . +..+.+
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V 132 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV 132 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence 9999998876654 788999999999887766531 22234678999999988765 3 688999
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCC-CCcee-ee--eccC-CCCCeEEEEEcc-CCCEE
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-TGHCM-KT--LIDD-ENPPVSFVKFSP-NGKFI 215 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~~-~~--~~~~-~~~~~~~~~~~~-~g~~l 215 (321)
.|+.+++.+..++... ...-...+++. .+ .-+.||......+. +++.. .. +... ..+-...-.+.+ +|+++
T Consensus 133 vD~~~~kvv~ei~vp~-~~~vy~t~e~~-~~-~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~ 209 (352)
T TIGR02658 133 VDLEGKAFVRMMDVPD-CYHIFPTANDT-FF-MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLV 209 (352)
T ss_pred EECCCCcEEEEEeCCC-CcEEEEecCCc-cE-EEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEE
Confidence 9999999888776532 11222222111 11 22233333332221 11111 11 1111 000000013455 88888
Q ss_pred EEEecCCeEEEEeCCCC-----cEEEEEeccCC------ceeEEEeEEEecCCeEEEE-e---------CCCCeEEEEEc
Q 020798 216 LVGTLDNTLRLWNYSTG-----KILKTYTGHTN------SKYCISSTFSVTNGKYIVS-G---------SEDSCVYLWEL 274 (321)
Q Consensus 216 ~~~~~d~~i~i~d~~~~-----~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~-~---------~~dg~i~vwd~ 274 (321)
++... |+|.+.|+... +.+..+..... ..+.. ....++++.+.. . ...+.|.++|.
T Consensus 210 ~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~--ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~ 286 (352)
T TIGR02658 210 WPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQ--VAYHRARDRIYLLADQRAKWTHKTASRFLFVVDA 286 (352)
T ss_pred EEecC-CeEEEEecCCCcceecceeeeccccccccccCCCccee--EEEcCCCCEEEEEecCCccccccCCCCEEEEEEC
Confidence 77766 99999996443 22332221100 01111 223355655554 2 12257999999
Q ss_pred ccceEEEEecCCCCCeEEEEecCCCc-eEEEEeecCCccEEEccccc
Q 020798 275 QSRKVVQKLEGHTDPVISVASHPTEN-IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 275 ~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~~~d~~~~i~iw~~~~ 320 (321)
.+++.+..+.. ...+..++++||++ +|.+... .++.|.+.|.+.
T Consensus 287 ~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~-~s~~VsViD~~t 331 (352)
T TIGR02658 287 KTGKRLRKIEL-GHEIDSINVSQDAKPLLYALST-GDKTLYIFDAET 331 (352)
T ss_pred CCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCC-CCCcEEEEECcC
Confidence 99999988764 45789999999999 7666553 356799988753
No 261
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.41 E-value=8.8e-09 Score=82.01 Aligned_cols=251 Identities=13% Similarity=0.256 Sum_probs=155.2
Q ss_pred CCcccEEEEEECCCCCEEEEecC---CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-CCc
Q 020798 21 GHLRAISSVKFSHDGRLLASSSA---DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-DKT 96 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~---d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-d~~ 96 (321)
.+...++-++|+|+++.|.++-. +|.+..|.+...... ...+........+...++++++|++++++.. .|.
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~----Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~ 112 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGR----LTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGS 112 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCe----EEEeeccccCCCCCeEEEECCCCCEEEEEEccCce
Confidence 46678889999999999988744 577877776532110 0111111111233377999999999998864 468
Q ss_pred EEEEecCC-ccee--eeeecCccc----------EEEEEECCCCCEEEEeeC-CCcEEEEecCCCEEEEEEe---CCCCC
Q 020798 97 IRLWDVPT-ATCL--KTLIGHTNY----------VFCVNFNPQSNMIVSGAF-DETVRIWDVKTGKCLKVLP---AHSDP 159 (321)
Q Consensus 97 i~iwd~~~-~~~~--~~~~~~~~~----------v~~~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~---~~~~~ 159 (321)
|.++-+.. +... .....|.+. +....+.|++++|++... --.|.+|++..+.....-+ .....
T Consensus 113 v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~G 192 (346)
T COG2706 113 VSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAG 192 (346)
T ss_pred EEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCC
Confidence 99998855 3221 122334443 778889999999888753 3468999998776432211 22344
Q ss_pred eeEEEEccCCCEEEEEe-CCCeEEEEeCCCC--c--eeeeec---c--CCCCCeEEEEEccCCCEEEEEec-CCeEEEEe
Q 020798 160 VTAVDFNRDGTMIVTSS-YDGLCRIWDASTG--H--CMKTLI---D--DENPPVSFVKFSPNGKFILVGTL-DNTLRLWN 228 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~--~--~~~~~~---~--~~~~~~~~~~~~~~g~~l~~~~~-d~~i~i~d 228 (321)
...+.|+|++++..+.+ -+++|-+|..... + .++.+. . ........+.++++|++|.++.. ...|.+|.
T Consensus 193 PRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~ 272 (346)
T COG2706 193 PRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFS 272 (346)
T ss_pred cceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEE
Confidence 57899999999876655 5899999988763 2 122211 1 11234667899999999988753 45788887
Q ss_pred CCCC-cEEEEEecc-CCceeEEEeEEEecCCeEEEEeCCC-CeEEEEEccc
Q 020798 229 YSTG-KILKTYTGH-TNSKYCISSTFSVTNGKYIVSGSED-SCVYLWELQS 276 (321)
Q Consensus 229 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-g~i~vwd~~~ 276 (321)
+... ..+...... ......-.+.+ .+++++|+++.++ ..|.+|....
T Consensus 273 V~~~~g~L~~~~~~~teg~~PR~F~i-~~~g~~Liaa~q~sd~i~vf~~d~ 322 (346)
T COG2706 273 VDPDGGKLELVGITPTEGQFPRDFNI-NPSGRFLIAANQKSDNITVFERDK 322 (346)
T ss_pred EcCCCCEEEEEEEeccCCcCCcccee-CCCCCEEEEEccCCCcEEEEEEcC
Confidence 6532 222222111 11111112222 3568888777655 4688887743
No 262
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.38 E-value=1.8e-12 Score=108.01 Aligned_cols=213 Identities=16% Similarity=0.321 Sum_probs=152.9
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC-------cceeeeeecCcccEEEEEECCCCCEEEEeeCCCc
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT-------ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 138 (321)
++.+.+|...|+.++--.+.+-+++++.|.+|++|.++. ..|..++..|+.+|..+.|-.+.+.++++ ||-
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~g 805 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGG 805 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCc
Confidence 456789999999887777778899999999999999753 23667788999999999998888777754 788
Q ss_pred EEEEecCCCEEEEEEe--CCCCCeeEEEEccC--CCEEEEE-eCCCeEEEEeCCCCceeeeeccC----CCCCeEEEEEc
Q 020798 139 VRIWDVKTGKCLKVLP--AHSDPVTAVDFNRD--GTMIVTS-SYDGLCRIWDASTGHCMKTLIDD----ENPPVSFVKFS 209 (321)
Q Consensus 139 i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~--~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~ 209 (321)
|++||.--++....+. ...+.+..+..-++ ...++.+ +...+++++|.+..+....+... .+..+.+++..
T Consensus 806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa 885 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVA 885 (1034)
T ss_pred ceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEec
Confidence 9999976666544321 11223333444343 3344444 78899999999987765554322 22347789999
Q ss_pred cCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEE-EEcccceEEEEec
Q 020798 210 PNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL-WELQSRKVVQKLE 284 (321)
Q Consensus 210 ~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~v-wd~~~~~~~~~~~ 284 (321)
+.|++++++-.+|.|.+.|.++|+.+..+..-. |-......|..+.|+....|.++.| |..-.+......+
T Consensus 886 ~~GN~lAa~LSnGci~~LDaR~G~vINswrpme----cdllqlaapsdq~L~~saldHslaVnWhaldgimh~q~k 957 (1034)
T KOG4190|consen 886 DKGNKLAAALSNGCIAILDARNGKVINSWRPME----CDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMHLQDK 957 (1034)
T ss_pred cCcchhhHHhcCCcEEEEecCCCceeccCCccc----chhhhhcCchhHHHHhhcccceeEeeehhcCCeeeeccC
Confidence 999999999999999999999999887764211 1111222355677888888889988 8876665544444
No 263
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.37 E-value=3.6e-09 Score=86.97 Aligned_cols=173 Identities=14% Similarity=0.186 Sum_probs=126.2
Q ss_pred ECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC-cEEEEecCCccee
Q 020798 31 FSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK-TIRLWDVPTATCL 108 (321)
Q Consensus 31 ~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~ 108 (321)
|++ +|++++..|. |...+.+.... . ..--+|.++|.-..+..+++-++.|..|| .+-|+|.++++.
T Consensus 327 fa~~~Gd~ia~VSR-GkaFi~~~~~~---------~-~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~- 394 (668)
T COG4946 327 FAVVNGDYIALVSR-GKAFIMRPWDG---------Y-SIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV- 394 (668)
T ss_pred hccCCCcEEEEEec-CcEEEECCCCC---------e-eEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-
Confidence 443 6888888874 44545432211 1 11125677788888888888889999999 899999988874
Q ss_pred eeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCC----CeEEEE
Q 020798 109 KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD----GLCRIW 184 (321)
Q Consensus 109 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~ 184 (321)
+.+...-+.|.++..+|+|++++.+.....|.+.|+.+++....-+...+-|+.++|+|++++++-+-.+ ..|+++
T Consensus 395 kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Ikly 474 (668)
T COG4946 395 KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLY 474 (668)
T ss_pred EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEE
Confidence 5555566779999999999999999999999999999998655555666789999999999999876544 479999
Q ss_pred eCCCCceeeeeccCCCCCeEEEEEccCCCEEEE
Q 020798 185 DASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 185 d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
|..+++..... ... ..-.+-+|.|++++|.-
T Consensus 475 dm~~~Kiy~vT-T~t-a~DfsPaFD~d~ryLYf 505 (668)
T COG4946 475 DMDGGKIYDVT-TPT-AYDFSPAFDPDGRYLYF 505 (668)
T ss_pred ecCCCeEEEec-CCc-ccccCcccCCCCcEEEE
Confidence 99887654332 111 11223578889888754
No 264
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.37 E-value=1.5e-11 Score=105.62 Aligned_cols=286 Identities=19% Similarity=0.342 Sum_probs=177.0
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC--CEEEEEeCCCcEEEE
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS--RFLVSASDDKTIRLW 100 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~--~~l~~~~~d~~i~iw 100 (321)
.+++.++..+|.|+-+|.++.-|.+.+ |+... ..++.-+..++ .-.|....|+|.. .+-++......-.+|
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~gl~i~-dld~p----~~ppr~l~h~t--pw~vad~qws~h~a~~~wiVsts~qkaiiw 96 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQGLYII-DLDDP----FTPPRWLHHIT--PWQVADVQWSPHPAKPYWIVSTSNQKAIIW 96 (1081)
T ss_pred cCcccceeeccccchhhhhhhcCeEEE-eccCC----CCCceeeeccC--cchhcceecccCCCCceeEEecCcchhhhh
Confidence 467888999999999999988776654 54321 12222222222 2246667787643 344444444556689
Q ss_pred ecCCc---ceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCE-EEEEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 101 DVPTA---TCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGK-CLKVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 101 d~~~~---~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
++... .....+.+|+..+..+.|+|+. ..+++++.|..+..||+++.. ++.....-......++|+.....+++.
T Consensus 97 nlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas 176 (1081)
T KOG0309|consen 97 NLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS 176 (1081)
T ss_pred hhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhh
Confidence 87543 3334457899999999999875 578999999999999998764 344444444566789998766667777
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEEeccC-CceeEEEeEEE
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHT-NSKYCISSTFS 253 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~ 253 (321)
+....+++||++.+.........+...+..+.|.. ....+.+.+.|++++.||..+..........+ .+++. ..+.
T Consensus 177 shg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~--~r~~ 254 (1081)
T KOG0309|consen 177 SHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWR--GRYL 254 (1081)
T ss_pred ccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCccee--cccc
Confidence 77788999999977655444444555566666654 23457788899999999986543222111111 11111 1111
Q ss_pred e-cCCeEEEEeCCCCeEEE---------EEccc-ceEEEEecCCCCCeEEEEecCCC----------ceEEEEeecCCcc
Q 020798 254 V-TNGKYIVSGSEDSCVYL---------WELQS-RKVVQKLEGHTDPVISVASHPTE----------NIIASGALDNDRT 312 (321)
Q Consensus 254 ~-~~~~~l~~~~~dg~i~v---------wd~~~-~~~~~~~~~h~~~v~~~~~~p~~----------~~l~s~~~d~~~~ 312 (321)
+ -+|.++.---.+..+.+ |+..+ .+.++.+.||.+.|...-|...+ -.|+|=| .|..
T Consensus 255 Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWS--kD~~ 332 (1081)
T KOG0309|consen 255 PFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWS--KDQT 332 (1081)
T ss_pred ccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEee--cCCc
Confidence 1 12222221111123333 44333 35688999999988877664332 2678866 5678
Q ss_pred EEEcccc
Q 020798 313 VKIWTQE 319 (321)
Q Consensus 313 i~iw~~~ 319 (321)
+++|-+.
T Consensus 333 lrlWpI~ 339 (1081)
T KOG0309|consen 333 LRLWPID 339 (1081)
T ss_pred eEeeecc
Confidence 9999764
No 265
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.37 E-value=5.1e-12 Score=117.81 Aligned_cols=199 Identities=13% Similarity=0.253 Sum_probs=150.7
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccc-ccccccEEEEEECCCCCEEEEEeCCCcEE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKF-TGHEQGVSDLVFSSDSRFLVSASDDKTIR 98 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~~~~~~l~~~~~d~~i~ 98 (321)
+.|...|.++.=+|...+-+||+.||.++.|...... .+..+ ..-...|+.+.|+.+|+.+..+..||.+.
T Consensus 2205 k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~--------~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~ 2276 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQ--------QVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLS 2276 (2439)
T ss_pred ecccCceeeecCCCCCceEEecCCCceEEEEeccCCC--------eEEEeeccCcchhhhhhhcccCCceeeeccCCcee
Confidence 4466788888889999999999999999999654321 11111 12236788999999999999999999999
Q ss_pred EEecCCcceeeeeecCcccEEEEEECCCCCEEEEee---CCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 99 LWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA---FDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 99 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
+|.+. .+.....+.|+.......|-. ..+++++ .++.+.+||..-. ..-..-.+|.+.++++++.|....|++
T Consensus 2277 l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllis 2353 (2439)
T KOG1064|consen 2277 LWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLIS 2353 (2439)
T ss_pred ecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEe
Confidence 99886 455566677887777776654 4566653 5688999996432 111122789999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 240 (321)
|+.+|.+++||++..+.+..+.. ++ ...++++++..|.++||++..-.++..+..
T Consensus 2354 ggr~G~v~l~D~rqrql~h~~~~----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2354 GGRKGEVCLFDIRQRQLRHTFQA----------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred cCCcCcEEEeehHHHHHHHHhhh----------hh-hhheeeccCcccceEEEEccccchhhcCch
Confidence 99999999999987665544321 44 566899999999999999988777766643
No 266
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.36 E-value=8.4e-09 Score=96.05 Aligned_cols=284 Identities=13% Similarity=0.185 Sum_probs=171.3
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...|.++.|-++...+..+..+|.|.+..... ......+.....-+.+|.+++||||+..|+..+.++++.+-+-
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~-----~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~ 149 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALASGDIILVREDP-----DPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTR 149 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECCceEEEEEccC-----CCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEec
Confidence 45788999999999899999999998873221 0111122222334678999999999999999988888876532
Q ss_pred C---------------Cccee--------eeeec------------------------CcccEEEEEECCCCCEEEEeeC
Q 020798 103 P---------------TATCL--------KTLIG------------------------HTNYVFCVNFNPQSNMIVSGAF 135 (321)
Q Consensus 103 ~---------------~~~~~--------~~~~~------------------------~~~~v~~~~~~~~~~~l~~~~~ 135 (321)
. ..+.+ ..+.| +...-..++|-.||.+|++.+.
T Consensus 150 ~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~ 229 (928)
T PF04762_consen 150 DFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSV 229 (928)
T ss_pred cceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEE
Confidence 1 00000 00000 2223457889999999988764
Q ss_pred ---C---CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC---CCeEEEEeCCCCceeeeec---cCCCCCe
Q 020798 136 ---D---ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY---DGLCRIWDASTGHCMKTLI---DDENPPV 203 (321)
Q Consensus 136 ---d---g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~---~~~~~~~ 203 (321)
. ..+++|+- .|........-.+--..++|.|.|+++++... ...|.+|.- +|.....+. ......+
T Consensus 230 ~~~~~~~R~iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v 307 (928)
T PF04762_consen 230 EPETGSRRVIRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKV 307 (928)
T ss_pred EcCCCceeEEEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCcee
Confidence 2 47899984 47655444333333457899999998887754 345666653 332211111 1334568
Q ss_pred EEEEEccCCCEEEEEecCCeEEEEeCCCCcE--EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc----ccc
Q 020798 204 SFVKFSPNGKFILVGTLDNTLRLWNYSTGKI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL----QSR 277 (321)
Q Consensus 204 ~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~----~~~ 277 (321)
..+.|++++..|++...|. |.+|-..+-.. .+.+....... .....|.+.+...|...+.+|.+..+++ ..+
T Consensus 308 ~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~-~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s 385 (928)
T PF04762_consen 308 IELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSES-VNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRS 385 (928)
T ss_pred eEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCC-CCceEECCCCCCEEEEEecCCcEEEEEEEEEEEec
Confidence 8999999999999877555 99998776432 11221111100 0113344444445555555454444332 100
Q ss_pred ----------------e--EE--------------EEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 278 ----------------K--VV--------------QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 278 ----------------~--~~--------------~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
. .+ ..+. ...+|.+++|++++..+|+-. .|+.|.+|..
T Consensus 386 ~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~-~~~~v~~vaf~~~~~~~avl~--~d~~l~~~~~ 455 (928)
T PF04762_consen 386 PGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELE-LPSPVNDVAFSPSNSRFAVLT--SDGSLSIYEW 455 (928)
T ss_pred CCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEc-CCCCcEEEEEeCCCCeEEEEE--CCCCEEEEEe
Confidence 0 00 1111 246899999999987777655 4577888874
No 267
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.36 E-value=1.5e-08 Score=83.54 Aligned_cols=243 Identities=13% Similarity=0.123 Sum_probs=139.5
Q ss_pred ECCCCCEEEEecC----------CceEEEeeccccCCCCCC--CCCcccccccccccEEEEEECCCCCEEEEEe-C-CCc
Q 020798 31 FSHDGRLLASSSA----------DKTLLTYSLSSISNSDST--PPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS-D-DKT 96 (321)
Q Consensus 31 ~s~~g~~l~~~~~----------d~~v~~~~~~~~~~~~~~--~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~-~-d~~ 96 (321)
+||||+.|+++.. +..|.+||.......... +..|... .......++++|||++|+... . +..
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~---~~~~~~~~~ls~dgk~l~V~n~~p~~~ 129 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL---VGTYPWMTSLTPDNKTLLFYQFSPSPA 129 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh---ccCccceEEECCCCCEEEEecCCCCCE
Confidence 8999998877655 788999998765432111 1111100 012234688999999998765 3 689
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC-CEE-EEE---EeCCCCCeeE-EEEcc-CC
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT-GKC-LKV---LPAHSDPVTA-VDFNR-DG 169 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~-~~~---~~~~~~~v~~-~~~~~-~~ 169 (321)
|.+.|+.+++.+..+.-.. ...-...+++.. .+ -+.||......+.+ ++. ... +.....++.. -.|.+ ++
T Consensus 130 V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~~-~~-~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg 206 (352)
T TIGR02658 130 VGVVDLEGKAFVRMMDVPD-CYHIFPTANDTF-FM-HCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSG 206 (352)
T ss_pred EEEEECCCCcEEEEEeCCC-CcEEEEecCCcc-EE-EeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCC
Confidence 9999999998877664322 111111222221 11 12344433322211 111 111 1110111110 03445 77
Q ss_pred CEEEEEeCCCeEEEEeCCCCc-----eeeeeccC------CCCCeEEEEEccCCCEEEEEe----------cCCeEEEEe
Q 020798 170 TMIVTSSYDGLCRIWDASTGH-----CMKTLIDD------ENPPVSFVKFSPNGKFILVGT----------LDNTLRLWN 228 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~-----~~~~~~~~------~~~~~~~~~~~~~g~~l~~~~----------~d~~i~i~d 228 (321)
+.+..... |.|.+.|+.... ....+... .......++++++++.+++.. ..+.|.++|
T Consensus 207 ~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD 285 (352)
T TIGR02658 207 RLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVD 285 (352)
T ss_pred cEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEE
Confidence 66655555 999999964432 11111111 112234489999999888743 225799999
Q ss_pred CCCCcEEEEEeccCCceeEEEeEEEecCCe-EEEEeC-CCCeEEEEEcccceEEEEec
Q 020798 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGS-EDSCVYLWELQSRKVVQKLE 284 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~~~~~~~~~~ 284 (321)
..+++.+..+.... ....+ ...+|++ +|++.+ .++.|.++|..+++.++.+.
T Consensus 286 ~~t~kvi~~i~vG~-~~~~i---avS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~ 339 (352)
T TIGR02658 286 AKTGKRLRKIELGH-EIDSI---NVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN 339 (352)
T ss_pred CCCCeEEEEEeCCC-ceeeE---EECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence 99999998876432 22222 2346777 776555 67889999999999988873
No 268
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.35 E-value=5.4e-09 Score=99.04 Aligned_cols=240 Identities=13% Similarity=0.139 Sum_probs=150.3
Q ss_pred EEEEECCC-CCEEEEEeCCCcEEEEecCCcceeeeeec--------------CcccEEEEEECCCCCEEEEee-CCCcEE
Q 020798 77 SDLVFSSD-SRFLVSASDDKTIRLWDVPTATCLKTLIG--------------HTNYVFCVNFNPQSNMIVSGA-FDETVR 140 (321)
Q Consensus 77 ~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~-~dg~i~ 140 (321)
..+++++. ++.+++-..++.|.++|..... +..+.+ .-.....++++++++.|+.+. ....|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~-i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNF-IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCE-EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 35788764 5667777788899999976442 322221 112346789999888766554 456799
Q ss_pred EEecCCCEEEEEEeCC-----------------CCCeeEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeeecc-----
Q 020798 141 IWDVKTGKCLKVLPAH-----------------SDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTGHCMKTLID----- 197 (321)
Q Consensus 141 ~wd~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----- 197 (321)
++|..++.. ..+... -.....++++| ++..+++...++.|++||..++........
T Consensus 650 ~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~ 728 (1057)
T PLN02919 650 EIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERN 728 (1057)
T ss_pred EEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCcccc
Confidence 999877653 222110 01235789999 556667777889999999877643211000
Q ss_pred --C------CCCCeEEEEEccCCCEEEEE-ecCCeEEEEeCCCCcEEEEEecc-------------CCc-----eeEEEe
Q 020798 198 --D------ENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYSTGKILKTYTGH-------------TNS-----KYCISS 250 (321)
Q Consensus 198 --~------~~~~~~~~~~~~~g~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~-------------~~~-----~~~~~~ 250 (321)
. .-.....++++|+|+.|+++ ..++.|++||+.++.......+. .+. ......
T Consensus 729 ~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~G 808 (1057)
T PLN02919 729 LNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLG 808 (1057)
T ss_pred CCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCce
Confidence 0 01124568999999865554 55789999999876532111000 000 000011
Q ss_pred EEEecCCeEEEEeCCCCeEEEEEcccceEEEEec-------------CCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE-------------GHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
....++|..+++-..++.|++||..++....... +......+++++++|+++++-+ .+++|++||
T Consensus 809 vavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt--~Nn~Irvid 886 (1057)
T PLN02919 809 VLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADT--NNSLIRYLD 886 (1057)
T ss_pred eeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEEC--CCCEEEEEE
Confidence 2234678888888999999999998765542211 1123467899999999888755 467999999
Q ss_pred ccc
Q 020798 318 QEK 320 (321)
Q Consensus 318 ~~~ 320 (321)
.+.
T Consensus 887 ~~~ 889 (1057)
T PLN02919 887 LNK 889 (1057)
T ss_pred CCC
Confidence 864
No 269
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.34 E-value=7.4e-09 Score=88.38 Aligned_cols=261 Identities=12% Similarity=0.080 Sum_probs=153.5
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeec
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG 113 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 113 (321)
.+.++++++.++.+..+|..+... +............... ++..++.++.++.+..+|..+++.+.....
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~--------~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 133 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKR--------LWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKL 133 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcE--------eeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeecc
Confidence 466788888889998887654321 1111111110111222 456788888999999999998887654432
Q ss_pred CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCee-----EEEEccCCCEEEEEeCCCeEEEEeCCC
Q 020798 114 HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT-----AVDFNRDGTMIVTSSYDGLCRIWDAST 188 (321)
Q Consensus 114 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~~dg~i~~~d~~~ 188 (321)
.......... .++.++.+..++.++.||.++++.+-.......... +... .+..++.+..++.+..+|.++
T Consensus 134 ~~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~t 209 (377)
T TIGR03300 134 SSEVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQT 209 (377)
T ss_pred CceeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccC
Confidence 2211111111 245677778899999999999987665543222110 1111 124677788889999999988
Q ss_pred CceeeeeccCCCC---C---eEEEEEcc--CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEE
Q 020798 189 GHCMKTLIDDENP---P---VSFVKFSP--NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI 260 (321)
Q Consensus 189 ~~~~~~~~~~~~~---~---~~~~~~~~--~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (321)
++........... . ...+.-+| .+..+++++.++.+..||..+++.+-....... ... . ..+..+
T Consensus 210 G~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~--~~p----~-~~~~~v 282 (377)
T TIGR03300 210 GQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASSY--QGP----A-VDDNRL 282 (377)
T ss_pred CCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCCc--cCc----e-EeCCEE
Confidence 8754332111000 0 00000011 345777888899999999999987765542111 001 1 135567
Q ss_pred EEeCCCCeEEEEEcccceEEEEecCCCCC-eEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 261 VSGSEDSCVYLWELQSRKVVQKLEGHTDP-VISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+.++.+|.|..+|..+++.+.+....... ..+... .+..|.+++ .+|.|.++|.+
T Consensus 283 yv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~--~~G~l~~~d~~ 338 (377)
T TIGR03300 283 YVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGD--FEGYLHWLSRE 338 (377)
T ss_pred EEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEe--CCCEEEEEECC
Confidence 77889999999999999887655322211 122222 355666665 45788888865
No 270
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.34 E-value=1.7e-10 Score=90.73 Aligned_cols=241 Identities=16% Similarity=0.300 Sum_probs=153.9
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc-----eeeeeecCc------------ccEEEEEECCCCC--EEEEee
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT-----CLKTLIGHT------------NYVFCVNFNPQSN--MIVSGA 134 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~~--~l~~~~ 134 (321)
.-|.++.|..+|.+|++|..+|.|.++.-.... ....++.|. ..|..+.|.++++ .++...
T Consensus 26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlst 105 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLST 105 (433)
T ss_pred cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEec
Confidence 458899999999999999999999999643221 122233332 3467788888764 567778
Q ss_pred CCCcEEEEecCCCEEEE--------------------EE----------------eCCCCCeeEEEEccCCCEEEEEeCC
Q 020798 135 FDETVRIWDVKTGKCLK--------------------VL----------------PAHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 135 ~dg~i~~wd~~~~~~~~--------------------~~----------------~~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
.|.+|++|.++...... .+ ..|.-.|.++.++.|+..++++ .|
T Consensus 106 NdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-Dd 184 (433)
T KOG1354|consen 106 NDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-DD 184 (433)
T ss_pred CCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-cc
Confidence 89999999874321100 00 1345567889999998877655 45
Q ss_pred CeEEEEeCCCCceeeeecc--CC-----CCCeEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEE----EEEeccCC---
Q 020798 179 GLCRIWDASTGHCMKTLID--DE-----NPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKIL----KTYTGHTN--- 243 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~--~~-----~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~--- 243 (321)
=.|.+|.+.-...-..+.. +. ...|+...|+|. .++++.+++.|+|++-|++...+- +.+.....
T Consensus 185 LRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~ 264 (433)
T KOG1354|consen 185 LRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSS 264 (433)
T ss_pred eeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcc
Confidence 6799998853211111111 11 124677889995 567777888999999999853211 11111111
Q ss_pred ------ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc-cceEEEEecCCC------------CCe---EEEEecCCCce
Q 020798 244 ------SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ-SRKVVQKLEGHT------------DPV---ISVASHPTENI 301 (321)
Q Consensus 244 ------~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h~------------~~v---~~~~~~p~~~~ 301 (321)
-+..++-.-+.++|+++++-.. -+|++||+. ..+.+..+.-|. +.| ..++|+.++.+
T Consensus 265 rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~ 343 (433)
T KOG1354|consen 265 RSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSY 343 (433)
T ss_pred hhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcce
Confidence 1122333334578999986543 589999994 345555544442 223 46889999999
Q ss_pred EEEEeecCCccEEEccc
Q 020798 302 IASGALDNDRTVKIWTQ 318 (321)
Q Consensus 302 l~s~~~d~~~~i~iw~~ 318 (321)
+.|||.. ..+++++.
T Consensus 344 v~TGsy~--n~frvf~~ 358 (433)
T KOG1354|consen 344 VMTGSYN--NVFRVFNL 358 (433)
T ss_pred Eeccccc--ceEEEecC
Confidence 9999964 56888874
No 271
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.33 E-value=4.3e-09 Score=89.81 Aligned_cols=258 Identities=15% Similarity=0.145 Sum_probs=151.5
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEE-EEECCCCCEEEEEeCCCcEEEEecCCcceeeeee
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSD-LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI 112 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 112 (321)
++..++.++.++.+..+|..+... +..... ...+.+ ... .+..++.++.++.+..||..+++.+....
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~--------~W~~~~-~~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 172 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKE--------LWRAKL-SSEVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYS 172 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcE--------eeeecc-CceeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEc
Confidence 456677777888888887643221 111110 011111 111 24467777889999999999888765543
Q ss_pred cCcccEE-----EEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCC----CCe---eEEEEcc--CCCEEEEEeCC
Q 020798 113 GHTNYVF-----CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS----DPV---TAVDFNR--DGTMIVTSSYD 178 (321)
Q Consensus 113 ~~~~~v~-----~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~----~~v---~~~~~~~--~~~~l~~~~~d 178 (321)
....... +... .+..++.+..++.+..+|.++++.+-...... ..+ ..+.-+| .+..+++++.+
T Consensus 173 ~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~ 250 (377)
T TIGR03300 173 RVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQ 250 (377)
T ss_pred cCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcC
Confidence 2221110 1111 13467778888999999999887654322110 000 0010011 24577788889
Q ss_pred CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe
Q 020798 179 GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (321)
|.++.+|..+++..-.... .. .... ...+..+++++.+|.+..+|..+++.+-......... ..... ..+.
T Consensus 251 g~l~a~d~~tG~~~W~~~~--~~-~~~p--~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~--~ssp~--i~g~ 321 (377)
T TIGR03300 251 GRVAALDLRSGRVLWKRDA--SS-YQGP--AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQ--LTAPA--VVGG 321 (377)
T ss_pred CEEEEEECCCCcEEEeecc--CC-ccCc--eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCc--cccCE--EECC
Confidence 9999999998876544321 11 1111 1245677788889999999999998776553211111 11111 1356
Q ss_pred EEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 259 YIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
.+++++.+|.|+++|..+++.+.+++.+..++..--.-.+++ |..++ .||.|..+
T Consensus 322 ~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~-l~v~~--~dG~l~~~ 376 (377)
T TIGR03300 322 YLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDG-LLVQT--RDGDLYAF 376 (377)
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCE-EEEEe--CCceEEEe
Confidence 788899999999999999999988876665443332223444 44445 35777665
No 272
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.33 E-value=2e-08 Score=93.54 Aligned_cols=291 Identities=15% Similarity=0.254 Sum_probs=168.3
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeecccc----------CCC------------CC---------------CCCCc
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSI----------SNS------------DS---------------TPPSP 65 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~----------~~~------------~~---------------~~~~~ 65 (321)
..+|.+++||||++.|+..+.++.+.+....-. ... ++ .+..+
T Consensus 120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~ 199 (928)
T PF04762_consen 120 DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP 199 (928)
T ss_pred cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC
Confidence 458999999999999999988888876532100 000 00 00000
Q ss_pred ---ccccccccccEEEEEECCCCCEEEEEeC---C---CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-
Q 020798 66 ---LQKFTGHEQGVSDLVFSSDSRFLVSASD---D---KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF- 135 (321)
Q Consensus 66 ---~~~~~~h~~~i~~~~~~~~~~~l~~~~~---d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~- 135 (321)
...+. +...-..|+|-.||+++|+.+. . +.++||+-+ +........-.+--.+++|.|.|++|++.-.
T Consensus 200 ~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~ 277 (928)
T PF04762_consen 200 KVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRL 277 (928)
T ss_pred ccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEc
Confidence 01122 4445677999999999998764 2 579999865 4433222222233347899999999988753
Q ss_pred --CCcEEEEecCCCEEEEEEe----CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce-e-eeeccCCCCCeEEEE
Q 020798 136 --DETVRIWDVKTGKCLKVLP----AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC-M-KTLIDDENPPVSFVK 207 (321)
Q Consensus 136 --dg~i~~wd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-~-~~~~~~~~~~~~~~~ 207 (321)
...|.+|. ++|-....+. .....|..+.|++++..|+....|. |.+|-..+..- + +.+.......+..+.
T Consensus 278 ~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~ 355 (928)
T PF04762_consen 278 PDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVK 355 (928)
T ss_pred CCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceE
Confidence 34566665 4454333332 2356789999999999999877655 99998876542 1 222222233344588
Q ss_pred EccCC-CEEEEEecCCeEEEEeCC----CC--------cEEEEEeccC---------------------CceeEEEeEEE
Q 020798 208 FSPNG-KFILVGTLDNTLRLWNYS----TG--------KILKTYTGHT---------------------NSKYCISSTFS 253 (321)
Q Consensus 208 ~~~~g-~~l~~~~~d~~i~i~d~~----~~--------~~~~~~~~~~---------------------~~~~~~~~~~~ 253 (321)
|+|.. ..|.+.+.++.+..++.. .+ ..+..+.+.. -+.......+.
T Consensus 356 Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~ 435 (928)
T PF04762_consen 356 WDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFS 435 (928)
T ss_pred ECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEe
Confidence 99853 445566665666555431 10 0111111110 00111222333
Q ss_pred ecCCeEEEEeCCCCeEEEEEcccce--------EEEEec----------CCCCCeEEEEecCCCceEEEEeec-CCccEE
Q 020798 254 VTNGKYIVSGSEDSCVYLWELQSRK--------VVQKLE----------GHTDPVISVASHPTENIIASGALD-NDRTVK 314 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~--------~~~~~~----------~h~~~v~~~~~~p~~~~l~s~~~d-~~~~i~ 314 (321)
+++..+++-..||.|.+|...... ....+. .-...+..++|..+...++....+ +...+.
T Consensus 436 -~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 514 (928)
T PF04762_consen 436 -PSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIV 514 (928)
T ss_pred -CCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEE
Confidence 455558888999999999854321 111111 113457888887777666665543 345676
Q ss_pred Eccc
Q 020798 315 IWTQ 318 (321)
Q Consensus 315 iw~~ 318 (321)
+++.
T Consensus 515 ~~~~ 518 (928)
T PF04762_consen 515 LVDI 518 (928)
T ss_pred EEEe
Confidence 6665
No 273
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.33 E-value=6.1e-10 Score=85.86 Aligned_cols=205 Identities=18% Similarity=0.164 Sum_probs=134.0
Q ss_pred ccEEEEEEC---CCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEE
Q 020798 24 RAISSVKFS---HDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRL 99 (321)
Q Consensus 24 ~~v~~~~~s---~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~i 99 (321)
..+..+.|. .+|. .++-+...|.+.+|......... ...++.....-.....++.|++.+..++++-.+|.+.+
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~--~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~ 147 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSV--HLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISG 147 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeee--eecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEE
Confidence 344555554 2455 56667778888888554322111 01111111111112457889999999999999999986
Q ss_pred EecCCcceee--eeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecC-CCEEEEE-EeCCCCCeeEEEEcc-CCCEEE
Q 020798 100 WDVPTATCLK--TLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVK-TGKCLKV-LPAHSDPVTAVDFNR-DGTMIV 173 (321)
Q Consensus 100 wd~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~-~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~ 173 (321)
-+.......+ ..+.|.-+++...|+. +.+.+++|+.|+.+..||++ .++.+.. .+.|...|.++.-+| .+..++
T Consensus 148 v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~ 227 (339)
T KOG0280|consen 148 VYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIA 227 (339)
T ss_pred EecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEE
Confidence 6655544433 6788999999999875 35788999999999999999 3333322 456778888888776 466899
Q ss_pred EEeCCCeEEEEeCCC-CceeeeeccCCCCCeEEEEEccCCC-EEEEEecCCeEEEEeCCCC
Q 020798 174 TSSYDGLCRIWDAST-GHCMKTLIDDENPPVSFVKFSPNGK-FILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~d~~i~i~d~~~~ 232 (321)
+|++|-.|++||.|+ ++++..- .....|..+..+|.-. .++.++.-+-.+|-+....
T Consensus 228 TGsYDe~i~~~DtRnm~kPl~~~--~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~ 286 (339)
T KOG0280|consen 228 TGSYDECIRVLDTRNMGKPLFKA--KVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDK 286 (339)
T ss_pred EeccccceeeeehhcccCccccC--ccccceEEEEecchhhhHHHHHHHhcCceEEEeccc
Confidence 999999999999984 4444332 2346788899988532 2233333334667666543
No 274
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.32 E-value=3e-10 Score=89.35 Aligned_cols=249 Identities=19% Similarity=0.345 Sum_probs=173.0
Q ss_pred CCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe-cCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCCCcEE
Q 020798 63 PSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD-VPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVR 140 (321)
Q Consensus 63 ~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 140 (321)
+..+..++||.+.+++...-|-.+-+++.+.|.++++|- .+.++....+. .-...++++.+.++...|+++-..|++.
T Consensus 14 p~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvt 93 (404)
T KOG1409|consen 14 PELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVT 93 (404)
T ss_pred hhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEE
Confidence 345667889999999888888878899999999999995 34444333332 1245678899999988999998999988
Q ss_pred EEecC----CCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEE
Q 020798 141 IWDVK----TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFIL 216 (321)
Q Consensus 141 ~wd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 216 (321)
-+.+. .....+....|..++..+-|+-..+.+++.+.|..+.-.-.+.+.-+......... ....+.-. +..
T Consensus 94 efs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~--t~~~~d~~--~~f 169 (404)
T KOG1409|consen 94 EFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPA--SALQFDAL--YAF 169 (404)
T ss_pred EEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccC--CCCceeeE--EEE
Confidence 88653 23344556788999999999988889999998887643333333211111100000 00111111 445
Q ss_pred EEecCCeEEEEeC--CCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce-EEEEecCCCCCeEEE
Q 020798 217 VGTLDNTLRLWNY--STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK-VVQKLEGHTDPVISV 293 (321)
Q Consensus 217 ~~~~d~~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~ 293 (321)
.|...|.+..-.+ ....++..+.+|.....++ ...+..+.|.+|..|..+.+||+--++ ....+.+|...|..+
T Consensus 170 vGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l---~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l 246 (404)
T KOG1409|consen 170 VGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCL---KWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQAL 246 (404)
T ss_pred ecccccceEEEEEeecCCceEEEEcCcccceEEE---EEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhh
Confidence 5555666555443 3456777888887765543 445677889999999999999996554 346678899999999
Q ss_pred EecCCCceEEEEeecCCccEEEccccc
Q 020798 294 ASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 294 ~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..-+.-+.|.+++ +||.|-+|+++.
T Consensus 247 ~~~~~t~~l~S~~--edg~i~~w~mn~ 271 (404)
T KOG1409|consen 247 SYAQHTRQLISCG--EDGGIVVWNMNV 271 (404)
T ss_pred hhhhhheeeeecc--CCCeEEEEeccc
Confidence 9888888899887 568899999864
No 275
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.32 E-value=8.6e-09 Score=97.67 Aligned_cols=250 Identities=14% Similarity=0.167 Sum_probs=152.4
Q ss_pred EEEEECCC-CCEEEEecCCceEEEeeccccCCCCCCCCCcc----cc-cccccccEEEEEECCCCCEEEEE-eCCCcEEE
Q 020798 27 SSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDSTPPSPL----QK-FTGHEQGVSDLVFSSDSRFLVSA-SDDKTIRL 99 (321)
Q Consensus 27 ~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~----~~-~~~h~~~i~~~~~~~~~~~l~~~-~~d~~i~i 99 (321)
..++++++ |+++++-+.++.|.+++............... -. -..+-.....+++.++++.|+.+ ...+.|++
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~ 650 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALRE 650 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEE
Confidence 35688874 56667777788898888654211000000000 00 00122345789999988766554 44567999
Q ss_pred EecCCcceeeeeecC-----------------cccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCC-----
Q 020798 100 WDVPTATCLKTLIGH-----------------TNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAH----- 156 (321)
Q Consensus 100 wd~~~~~~~~~~~~~-----------------~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~----- 156 (321)
+|..++.. ..+.+- -.....++++|+ +..+++...++.|++||..++.... +...
T Consensus 651 id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~-~~G~G~~~~ 728 (1057)
T PLN02919 651 IDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRV-FSGDGYERN 728 (1057)
T ss_pred EecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEE-EecCCcccc
Confidence 99876642 222110 112357899994 5566777778899999987765432 1110
Q ss_pred ----------CCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeec------------cCC--------CCCeEE
Q 020798 157 ----------SDPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLI------------DDE--------NPPVSF 205 (321)
Q Consensus 157 ----------~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~------------~~~--------~~~~~~ 205 (321)
-.....++++|+++ ++++.+.++.|++||+.++....... ... -.....
T Consensus 729 ~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~G 808 (1057)
T PLN02919 729 LNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLG 808 (1057)
T ss_pred CCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCce
Confidence 12345799999988 45556677899999988654221100 000 012357
Q ss_pred EEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC-----------ceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 206 VKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN-----------SKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
++++++|+.+++-..++.|++||..++...... +... ...........++|+.+++.+.++.|++||+
T Consensus 809 vavd~dG~LYVADs~N~rIrviD~~tg~v~tia-G~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~ 887 (1057)
T PLN02919 809 VLCAKDGQIYVADSYNHKIKKLDPATKRVTTLA-GTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDL 887 (1057)
T ss_pred eeEeCCCcEEEEECCCCEEEEEECCCCeEEEEe-ccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 889999998888888999999998877654322 1110 0001112233467888888899999999999
Q ss_pred ccceE
Q 020798 275 QSRKV 279 (321)
Q Consensus 275 ~~~~~ 279 (321)
.+++.
T Consensus 888 ~~~~~ 892 (1057)
T PLN02919 888 NKGEA 892 (1057)
T ss_pred CCCcc
Confidence 88754
No 276
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.31 E-value=4e-09 Score=87.31 Aligned_cols=265 Identities=15% Similarity=0.247 Sum_probs=165.2
Q ss_pred ccEEEEEECCCCCEEEEecCCce---------------EEEeeccccCCCCCC-----C--CCccc--------------
Q 020798 24 RAISSVKFSHDGRLLASSSADKT---------------LLTYSLSSISNSDST-----P--PSPLQ-------------- 67 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~---------------v~~~~~~~~~~~~~~-----~--~~~~~-------------- 67 (321)
..|.-+.|||.++||.+.+.... +.+||.......... + ..++.
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~ 151 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVG 151 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhcc
Confidence 46788899999999999877555 788887654311110 0 00000
Q ss_pred -cccccc---------------ccEEEEEECCCCC--EEEE-----EeCCCcEEEEecCCcceeeeeecCcccEEEEEEC
Q 020798 68 -KFTGHE---------------QGVSDLVFSSDSR--FLVS-----ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN 124 (321)
Q Consensus 68 -~~~~h~---------------~~i~~~~~~~~~~--~l~~-----~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 124 (321)
.+.-|+ .+|....|+|.++ .|+. .+..+.+++|.+..++.+....-....-..+.|+
T Consensus 152 ~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~ 231 (561)
T COG5354 152 SSLYIHEITDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQ 231 (561)
T ss_pred CeEEEEecCCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEe
Confidence 001111 4677888888643 3432 4567789999998776654432222223467788
Q ss_pred CCCCEEEEee-----------CCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe--CCCeEEEEeCCCCce
Q 020798 125 PQSNMIVSGA-----------FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS--YDGLCRIWDASTGHC 191 (321)
Q Consensus 125 ~~~~~l~~~~-----------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~ 191 (321)
+.|++|+.-- ...++++++++... +.....-.++|...+|.|.++.+++.+ ....+.++|++.. .
T Consensus 232 ~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l 309 (561)
T COG5354 232 VLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-L 309 (561)
T ss_pred cCCceEEEEEEEeeecccceeccceEEEEeecccc-cceeccccccceeeeecccCCceeEEecccccceeecccccc-e
Confidence 8887765311 12467888876333 222224578999999999988776554 6788999999876 2
Q ss_pred eeeeccCCCCCeEEEEEccCCCEEEEEecC---CeEEEEeCCCCcEEE-EEeccCCceeEEEeEEEecCCeEEEEeC---
Q 020798 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLD---NTLRLWNYSTGKILK-TYTGHTNSKYCISSTFSVTNGKYIVSGS--- 264 (321)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d---~~i~i~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 264 (321)
. ..... ..-+.+.|+|.+++++.++.| |.+.+||........ .+.+.. . ..+-+.++++++.+..
T Consensus 310 ~-~~~Pe--~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n-~----s~~~wspd~qF~~~~~ts~ 381 (561)
T COG5354 310 R-FYFPE--QKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN-T----SYCDWSPDGQFYDTDTTSE 381 (561)
T ss_pred E-EecCC--cccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCC-c----eEeeccCCceEEEecCCCc
Confidence 2 22211 223457799999999998765 689999987665444 454322 1 2233457888887764
Q ss_pred ---CCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 265 ---EDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 265 ---~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
.|..|.|||+.....- ..+.+.|.|.+++..+.|
T Consensus 382 k~~~Dn~i~l~~v~g~~~f--------el~~~~W~p~~~~~ttsS 418 (561)
T COG5354 382 KLRVDNSIKLWDVYGAKVF--------ELTNITWDPSGQYVTTSS 418 (561)
T ss_pred ccccCcceEEEEecCchhh--------hhhhccccCCcccceeec
Confidence 3678999998644321 455666666665554444
No 277
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.29 E-value=5.7e-11 Score=101.95 Aligned_cols=234 Identities=14% Similarity=0.158 Sum_probs=160.1
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcce---------------eeeeecCcccEEEEEECCCCCEEEEeeCCCc
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC---------------LKTLIGHTNYVFCVNFNPQSNMIVSGAFDET 138 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 138 (321)
....++.|+.+..++++|+.||.+++..+.+.+. -.++.||++.|..+.|+.+...|-+...+|.
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl 94 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL 94 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence 4578999999999999999999999998755321 1246799999999999999999999999999
Q ss_pred EEEEecCCCEEEEEE--eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEE
Q 020798 139 VRIWDVKTGKCLKVL--PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFIL 216 (321)
Q Consensus 139 i~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 216 (321)
|.+|-+-.+.-...+ ....+-|.+++|+.+|..++....||.|.+=.+...+.-..-+. ......+.|++|.+.++
T Consensus 95 IiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLk--g~~l~hv~ws~D~~~~L 172 (1189)
T KOG2041|consen 95 IIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELK--GQLLAHVLWSEDLEQAL 172 (1189)
T ss_pred EEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcc--hheccceeecccHHHHH
Confidence 999987665422221 12345688999999999999999999887765554332111111 12234678999998888
Q ss_pred EEecCCeEEEEeCCCCc-----EEE--EEec-cCC---ceeEE-----EeEEEecCCeEEEEeCCCCeEEEEEcccceEE
Q 020798 217 VGTLDNTLRLWNYSTGK-----ILK--TYTG-HTN---SKYCI-----SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 217 ~~~~d~~i~i~d~~~~~-----~~~--~~~~-~~~---~~~~~-----~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
.+-.+|.+.+||.+..- ... ...+ ... ....+ .....+|+...|+.+-.+|.+.+-.-.+....
T Consensus 173 f~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~P 252 (1189)
T KOG2041|consen 173 FKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEP 252 (1189)
T ss_pred hhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCC
Confidence 88889999999965320 000 0000 000 00000 01123457778999999998887654433222
Q ss_pred EEecCCCCCeEEEEecCCCceEEEEeecCC
Q 020798 281 QKLEGHTDPVISVASHPTENIIASGALDND 310 (321)
Q Consensus 281 ~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~ 310 (321)
..+.. .-.|.+..|+++|..||.+|.|.|
T Consensus 253 vv~dt-gm~~vgakWnh~G~vLAvcG~~~d 281 (1189)
T KOG2041|consen 253 VVVDT-GMKIVGAKWNHNGAVLAVCGNDSD 281 (1189)
T ss_pred eEEec-ccEeecceecCCCcEEEEccCccc
Confidence 22221 246889999999999999987644
No 278
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.25 E-value=5.6e-09 Score=87.38 Aligned_cols=248 Identities=16% Similarity=0.291 Sum_probs=155.5
Q ss_pred EEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC--CEEEE-----EeCCCcEEE
Q 020798 27 SSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS--RFLVS-----ASDDKTIRL 99 (321)
Q Consensus 27 ~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~--~~l~~-----~~~d~~i~i 99 (321)
.++.|++|..+.|-- ..+.+.+|+..... .+.. .-|..+|..+.++|.+ .++|+ .+.=..++|
T Consensus 129 W~~qfs~dEsl~arl-v~nev~f~~~~~f~-------~~~~--kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri 198 (566)
T KOG2315|consen 129 WVPQFSIDESLAARL-VSNEVQFYDLGSFK-------TIQH--KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRI 198 (566)
T ss_pred cccccccchhhhhhh-hcceEEEEecCCcc-------ceee--eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEE
Confidence 578888887765433 24568888775411 1111 2356789999999863 34443 344557999
Q ss_pred EecCCccee-----eeeecCcccEEEEEECCCCCEE---EEeeCC---------CcEEEEecCCCEEEEEEeCCCCCeeE
Q 020798 100 WDVPTATCL-----KTLIGHTNYVFCVNFNPQSNMI---VSGAFD---------ETVRIWDVKTGKCLKVLPAHSDPVTA 162 (321)
Q Consensus 100 wd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l---~~~~~d---------g~i~~wd~~~~~~~~~~~~~~~~v~~ 162 (321)
|.......- +++. ...=-.+.|++-|.-| ++..-| .++++.+++...+...+ ...++|.+
T Consensus 199 ~~~~~~~~~~~~a~ksFF--kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L-~k~GPVhd 275 (566)
T KOG2315|consen 199 YKYPEEGQHQPVANKSFF--KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL-LKEGPVHD 275 (566)
T ss_pred eccccccccchhhhcccc--ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-CCCCCceE
Confidence 987622110 1111 1111246677766532 222233 36888887743433333 34789999
Q ss_pred EEEccCCCEEEEEe--CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC---CeEEEEeCCCCcEEEE
Q 020798 163 VDFNRDGTMIVTSS--YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD---NTLRLWNYSTGKILKT 237 (321)
Q Consensus 163 ~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d---~~i~i~d~~~~~~~~~ 237 (321)
+.|+|+++-|+++. .-..+.+||++.. .+..+ ...+-+.+-|+|.|++++.++.+ |.+.|||+.+.+.+..
T Consensus 276 v~W~~s~~EF~VvyGfMPAkvtifnlr~~-~v~df---~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~ 351 (566)
T KOG2315|consen 276 VTWSPSGREFAVVYGFMPAKVTIFNLRGK-PVFDF---PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAK 351 (566)
T ss_pred EEECCCCCEEEEEEecccceEEEEcCCCC-EeEeC---CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccc
Confidence 99999998776543 4568899998853 33333 23345678899999999988764 7899999999888888
Q ss_pred EeccCCceeEEEeEEEecCCeEEEEeCC------CCeEEEEEcccceEEEEecCCCCCeEEEEecCC
Q 020798 238 YTGHTNSKYCISSTFSVTNGKYIVSGSE------DSCVYLWELQSRKVVQKLEGHTDPVISVASHPT 298 (321)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~ 298 (321)
+..... . .+-+.|||++++|++. |+.++||+.. |..+..-. ..+.+..+.|-|-
T Consensus 352 ~~a~~t----t-~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~~-f~sEL~qv~W~P~ 411 (566)
T KOG2315|consen 352 FKAANT----T-VFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEKM-FKSELLQVEWRPF 411 (566)
T ss_pred cccCCc----e-EEEEcCCCcEEEEEeccccEEecCCeEEEEec-Cceeehhh-hhHhHhheeeeec
Confidence 765432 1 2334589999999875 5678899975 44443221 1125777777654
No 279
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.25 E-value=1.3e-07 Score=75.65 Aligned_cols=218 Identities=16% Similarity=0.185 Sum_probs=135.1
Q ss_pred EEEECC-CCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEEC-CCCCEEEEeeCCCcEEEEecCCCEEEEEEeC
Q 020798 78 DLVFSS-DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFN-PQSNMIVSGAFDETVRIWDVKTGKCLKVLPA 155 (321)
Q Consensus 78 ~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 155 (321)
++.|.+ ++.++++-...+.|..|+..+++... +.. .. ...+++. ++ ..|+.+...+ +.++|..+++.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~-~~-~~G~~~~~~~-g~l~v~~~~~-~~~~d~~~g~~~~~~~~ 78 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDL-PG-PNGMAFDRPD-GRLYVADSGG-IAVVDPDTGKVTVLADL 78 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EES-SS-EEEEEEECTT-SEEEEEETTC-EEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-Eec-CC-CceEEEEccC-CEEEEEEcCc-eEEEecCCCcEEEEeec
Confidence 467887 67777777788999999998876432 221 22 5666777 55 4555555544 55669888865443332
Q ss_pred -----CCCCeeEEEEccCCCEEEEEeCC--------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEE-EecC
Q 020798 156 -----HSDPVTAVDFNRDGTMIVTSSYD--------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV-GTLD 221 (321)
Q Consensus 156 -----~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~-~~~d 221 (321)
.......+++.|+|++.++.... |.+..++.. ++.. ..... -...+.++|+|+++.|++ -+..
T Consensus 79 ~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~-~~~~~-~~~pNGi~~s~dg~~lyv~ds~~ 155 (246)
T PF08450_consen 79 PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVT-VVADG-LGFPNGIAFSPDGKTLYVADSFN 155 (246)
T ss_dssp ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEE-EEEEE-ESSEEEEEEETTSSEEEEEETTT
T ss_pred cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEE-EEecC-cccccceEECCcchheeeccccc
Confidence 23456789999999977776543 456667766 4322 22222 234678999999997765 4567
Q ss_pred CeEEEEeCCCCc--E--EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEec-
Q 020798 222 NTLRLWNYSTGK--I--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH- 296 (321)
Q Consensus 222 ~~i~i~d~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~- 296 (321)
+.|..|++.... . .+.+.................+|.+.++....+.|.+++.. ++++..+......+++++|.
T Consensus 156 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg 234 (246)
T PF08450_consen 156 GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGG 234 (246)
T ss_dssp TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEES
T ss_pred ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEEC
Confidence 889999985322 1 12221111111112333344678888877788999999987 88888777665688999994
Q ss_pred CCCc-eEEE
Q 020798 297 PTEN-IIAS 304 (321)
Q Consensus 297 p~~~-~l~s 304 (321)
|+.+ +++|
T Consensus 235 ~~~~~L~vT 243 (246)
T PF08450_consen 235 PDGKTLYVT 243 (246)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEE
Confidence 5644 4444
No 280
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.23 E-value=1.7e-10 Score=92.44 Aligned_cols=162 Identities=17% Similarity=0.316 Sum_probs=110.4
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE---EEeCCCcEEEEec
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV---SASDDKTIRLWDV 102 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~---~~~~d~~i~iwd~ 102 (321)
...+..+|+++++|.+..+....++++..... ....+...... ..-+++.|..+..... -++....+.+|..
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~----~~kl~~~~~v~-~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~ 139 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPK----GAKLLDVSCVP-KRPTAISFIREDTSVLVADKAGDVYSFDILSA 139 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCC----cceeeeEeecc-cCcceeeeeeccceEEEEeecCCceeeeeecc
Confidence 44556789999999998888876666543221 11112221111 1223344444433333 3455556677776
Q ss_pred CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE-eCCCCCeeEEEEccCCCEEEEEeCCCeE
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL-PAHSDPVTAVDFNRDGTMIVTSSYDGLC 181 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i 181 (321)
..+. ...+.||-..+..++++||+++++++..|..|++-.....-.+..+ -+|..-|..++.-++. .|++++.|+++
T Consensus 140 ~~~~-~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tl 217 (390)
T KOG3914|consen 140 DSGR-CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTL 217 (390)
T ss_pred cccC-cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcE
Confidence 6544 3456789999999999999999999999999998665443333333 4699999999987654 58999999999
Q ss_pred EEEeCCCCceeee
Q 020798 182 RIWDASTGHCMKT 194 (321)
Q Consensus 182 ~~~d~~~~~~~~~ 194 (321)
++||+++++++..
T Consensus 218 r~Wd~~sgk~L~t 230 (390)
T KOG3914|consen 218 RLWDITSGKLLDT 230 (390)
T ss_pred EEEecccCCcccc
Confidence 9999999987644
No 281
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.21 E-value=4.6e-08 Score=83.85 Aligned_cols=190 Identities=17% Similarity=0.116 Sum_probs=115.3
Q ss_pred cEEEEEECCCCCE-EEEecCC---ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE-eCC--CcE
Q 020798 25 AISSVKFSHDGRL-LASSSAD---KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA-SDD--KTI 97 (321)
Q Consensus 25 ~v~~~~~s~~g~~-l~~~~~d---~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~-~~d--~~i 97 (321)
.....+|+|||+. ++..+.+ ..|.++++.... ...+....+......|+|||+.++.. +.+ ..|
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~---------~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~I 259 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGK---------KEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDI 259 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCc---------EEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEE
Confidence 6778999999984 6654444 345555553211 11222234445667899999877643 333 467
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CC--cEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DE--TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
.++|+.+++. ..+..+........|+|||+.|+..+. .+ .|++.|+.+++..+.... ... ...|+|+|+.++.
T Consensus 260 y~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~ 335 (419)
T PRK04043 260 YLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN--NSSVSTYKNYIVY 335 (419)
T ss_pred EEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc--CceECCCCCEEEE
Confidence 7778877753 334333333345679999987765543 33 688888887765433221 111 2489999998876
Q ss_pred EeCC---------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC---eEEEEeCC
Q 020798 175 SSYD---------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN---TLRLWNYS 230 (321)
Q Consensus 175 ~~~d---------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~---~i~i~d~~ 230 (321)
.... ..|.+.|+.++.. ..+... . ......|+|||+.++....++ .+.++++.
T Consensus 336 ~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~ 400 (419)
T PRK04043 336 SSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-G-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN 400 (419)
T ss_pred EEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-C-CcCCeEECCCCCEEEEEEccCCcEEEEEEecC
Confidence 6543 3678888877753 333222 1 223578999999887765432 35555654
No 282
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.20 E-value=4.9e-09 Score=81.76 Aligned_cols=215 Identities=20% Similarity=0.374 Sum_probs=140.5
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccccc------------ccEEEEEECCCC--CE
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHE------------QGVSDLVFSSDS--RF 87 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~i~~~~~~~~~--~~ 87 (321)
...-|+++.|...|.||++|...|.|.+|.......-+ ......+++|. ..|..+.|..++ ..
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ce---ykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~h 101 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCE---YKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNH 101 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccc---hhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcce
Confidence 34679999999999999999999999998654322111 11223344444 347778887654 35
Q ss_pred EEEEeCCCcEEEEecCCcc-------------------ee----------------------ee--eecCcccEEEEEEC
Q 020798 88 LVSASDDKTIRLWDVPTAT-------------------CL----------------------KT--LIGHTNYVFCVNFN 124 (321)
Q Consensus 88 l~~~~~d~~i~iwd~~~~~-------------------~~----------------------~~--~~~~~~~v~~~~~~ 124 (321)
++..+.|.+|++|.+.... ++ .+ ...|.-.+.++.++
T Consensus 102 FLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~N 181 (460)
T COG5170 102 FLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFN 181 (460)
T ss_pred EEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeec
Confidence 6677899999999874320 00 00 13566678889999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCE---EEEEEeCCC-----CCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCce----
Q 020798 125 PQSNMIVSGAFDETVRIWDVKTGK---CLKVLPAHS-----DPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHC---- 191 (321)
Q Consensus 125 ~~~~~l~~~~~dg~i~~wd~~~~~---~~~~~~~~~-----~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~---- 191 (321)
.|...++++ .|-.|.+|++.-.. .+..++.|. .-|++..|+|... .+.-.+..|.|++-|++....
T Consensus 182 sD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~ 260 (460)
T COG5170 182 SDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNS 260 (460)
T ss_pred Cchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCc
Confidence 988888775 46789999875322 122233333 3478899999644 555677889999999984211
Q ss_pred --eee---------eccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC-cEEEEEecc
Q 020798 192 --MKT---------LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG-KILKTYTGH 241 (321)
Q Consensus 192 --~~~---------~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~ 241 (321)
... ........|..+.|+++|+++++- .-.++++||++.. .++.+++.|
T Consensus 261 ~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsR-dyltvkiwDvnm~k~pikTi~~h 321 (460)
T COG5170 261 KKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSR-DYLTVKIWDVNMAKNPIKTIPMH 321 (460)
T ss_pred hhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEe-ccceEEEEecccccCCceeechH
Confidence 000 111122357789999999998753 3457999998754 356665433
No 283
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.17 E-value=5.7e-08 Score=77.35 Aligned_cols=216 Identities=19% Similarity=0.185 Sum_probs=135.4
Q ss_pred CCcEEEEecCCcceeeeeec---CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC
Q 020798 94 DKTIRLWDVPTATCLKTLIG---HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
+|+|..||..+++.+..... ....+ +. ..++++.+++++.++.++.||..+|+.+-.... ..++.... ...+.
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~-~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~ 77 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPV-AT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGG 77 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEE-ET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETT
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCcc-ce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eeccc
Confidence 67889999988887766532 12221 11 223466787788999999999999998777665 33322222 22345
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeee-ccCC-C-CCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce-e
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTL-IDDE-N-PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK-Y 246 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~-~-~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~ 246 (321)
.++++..++.++.+|..+++..... .... . ...........+..++++..++.|..+|+++|+.+..+....... .
T Consensus 78 ~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~ 157 (238)
T PF13360_consen 78 RVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSS 157 (238)
T ss_dssp EEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS-
T ss_pred ccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCc
Confidence 6677778889999999999877663 2221 1 111222333347788888889999999999999988886643221 0
Q ss_pred E------EEeEEEecCCeEEEEeCCCCe-EEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 247 C------ISSTFSVTNGKYIVSGSEDSC-VYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 247 ~------~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
. ........++ .+..++.++. +.+ |+.+++.+.... ...+..+ ..+++..|..++ .++.|..||.+
T Consensus 158 ~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~~-~~~~~~~l~~~~--~~~~l~~~d~~ 230 (238)
T PF13360_consen 158 PISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP--ISGIYSL-PSVDGGTLYVTS--SDGRLYALDLK 230 (238)
T ss_dssp -EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC--SS-ECEC-EECCCTEEEEEE--TTTEEEEEETT
T ss_pred ceeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec--CCCccCC-ceeeCCEEEEEe--CCCEEEEEECC
Confidence 0 1112222345 5566666775 555 999998665433 2233332 345667777766 46899999986
Q ss_pred c
Q 020798 320 K 320 (321)
Q Consensus 320 ~ 320 (321)
.
T Consensus 231 t 231 (238)
T PF13360_consen 231 T 231 (238)
T ss_dssp T
T ss_pred C
Confidence 4
No 284
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.16 E-value=6.4e-10 Score=89.26 Aligned_cols=162 Identities=20% Similarity=0.307 Sum_probs=111.7
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecCCcce-ee--eeecCcccEEEEEECCCCCEEEEe---eCCCcEEEEecCCCEE
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATC-LK--TLIGHTNYVFCVNFNPQSNMIVSG---AFDETVRIWDVKTGKC 149 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~--~~~~~~~~v~~~~~~~~~~~l~~~---~~dg~i~~wd~~~~~~ 149 (321)
...+..+++++++|.+..+....+++...... .+ ....-....+.+.+..+......+ +....+.+|....+.+
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~ 144 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC 144 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc
Confidence 44566788899999888888877777654432 11 111111122333444333443333 3444455555444333
Q ss_pred EEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 150 LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 150 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
..+-+|-..+++++|+||+++++++..|..|++-.......+..+..+|..-|..++.-++ ..|++++.|++|++||+
T Consensus 145 -~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~ 222 (390)
T KOG3914|consen 145 -EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDI 222 (390)
T ss_pred -chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEec
Confidence 3345789999999999999999999999999998877766677777777778888887655 45889999999999999
Q ss_pred CCCcEEEEEe
Q 020798 230 STGKILKTYT 239 (321)
Q Consensus 230 ~~~~~~~~~~ 239 (321)
.+++.+..+.
T Consensus 223 ~sgk~L~t~d 232 (390)
T KOG3914|consen 223 TSGKLLDTCD 232 (390)
T ss_pred ccCCcccccc
Confidence 9998876553
No 285
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.15 E-value=1.1e-07 Score=81.55 Aligned_cols=192 Identities=13% Similarity=0.076 Sum_probs=117.5
Q ss_pred cEEEEEECCCCCE-EEEEeCC---CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEe-eC--CCcEEEEecCCC
Q 020798 75 GVSDLVFSSDSRF-LVSASDD---KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG-AF--DETVRIWDVKTG 147 (321)
Q Consensus 75 ~i~~~~~~~~~~~-l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~--dg~i~~wd~~~~ 147 (321)
......|+|||+. ++..+.+ ..|.++|+.+++... +....+......|+|||+.++.. +. +..|+++|+.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~-lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK-IASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE-EecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 5667899999985 6544433 468888998876433 33344455667899999876543 32 356888898777
Q ss_pred EEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC---
Q 020798 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD--- 221 (321)
Q Consensus 148 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d--- 221 (321)
+.. .+..+........|+|||+.++..+. .+ .|.+.|+.+++..+..... .. ...|+|+|++++.....
T Consensus 268 ~~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g-~~---~~~~SPDG~~Ia~~~~~~~~ 342 (419)
T PRK04043 268 TLT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHG-KN---NSSVSTYKNYIVYSSRETNN 342 (419)
T ss_pred cEE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCC-Cc---CceECCCCCEEEEEEcCCCc
Confidence 643 34333333445689999997776653 33 5778888876653322211 11 24899999998876543
Q ss_pred ------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-C--eEEEEEcccc
Q 020798 222 ------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-S--CVYLWELQSR 277 (321)
Q Consensus 222 ------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-g--~i~vwd~~~~ 277 (321)
..|.+.|+.++... .+.... .. ....| .|||+.++-.+.+ + .+.+.++...
T Consensus 343 ~~~~~~~~I~v~d~~~g~~~-~LT~~~-~~--~~p~~-SPDG~~I~f~~~~~~~~~L~~~~l~g~ 402 (419)
T PRK04043 343 EFGKNTFNLYLISTNSDYIR-RLTANG-VN--QFPRF-SSDGGSIMFIKYLGNQSALGIIRLNYN 402 (419)
T ss_pred ccCCCCcEEEEEECCCCCeE-ECCCCC-Cc--CCeEE-CCCCCEEEEEEccCCcEEEEEEecCCC
Confidence 36888898877643 333221 11 11223 4788866654332 2 3566666543
No 286
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=99.14 E-value=2.7e-07 Score=73.60 Aligned_cols=205 Identities=19% Similarity=0.266 Sum_probs=133.1
Q ss_pred EEEECC-CCCEEEEecCCce-EEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-----CCcEEEE
Q 020798 28 SVKFSH-DGRLLASSSADKT-LLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-----DKTIRLW 100 (321)
Q Consensus 28 ~~~~s~-~g~~l~~~~~d~~-v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-----d~~i~iw 100 (321)
.++.+| .+..++.+..-|. ..++|.............+-+.|.+|. .|++||++|++.-. .|.|-||
T Consensus 9 ~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg------~fs~dG~~LytTEnd~~~g~G~IgVy 82 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHG------VFSPDGRLLYTTENDYETGRGVIGVY 82 (305)
T ss_pred ceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCE------EEcCCCCEEEEeccccCCCcEEEEEE
Confidence 567777 4455666655553 445666544332222233445566664 79999999998643 4789999
Q ss_pred ecC-CcceeeeeecCcccEEEEEECCCCCEEEEeeC------------------CCcEEEEecCCCEEEEE--E--eCCC
Q 020798 101 DVP-TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF------------------DETVRIWDVKTGKCLKV--L--PAHS 157 (321)
Q Consensus 101 d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------dg~i~~wd~~~~~~~~~--~--~~~~ 157 (321)
|.. +.+.+..+..|.-....+.+.||+..|+.+.. +..+.+.|..+|+.+.. + ..|.
T Consensus 83 d~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~ 162 (305)
T PF07433_consen 83 DAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQ 162 (305)
T ss_pred ECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccc
Confidence 998 55566667666666677889999977776532 23345556677776665 3 2366
Q ss_pred CCeeEEEEccCCCEEEEEeCCCe-------EEEEeCCCCceeeeec------cCCCCCeEEEEEccCCCEEEEEe-cCCe
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGL-------CRIWDASTGHCMKTLI------DDENPPVSFVKFSPNGKFILVGT-LDNT 223 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~-------i~~~d~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~l~~~~-~d~~ 223 (321)
..+..+++.++|..++..-+.|. +-+++.... +..+. ......+-+++++++|.++++++ ..+.
T Consensus 163 lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~--~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~ 240 (305)
T PF07433_consen 163 LSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGA--LRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGR 240 (305)
T ss_pred cceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCc--ceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCE
Confidence 78999999999887766654442 333432221 11111 11234578899999999887666 5678
Q ss_pred EEEEeCCCCcEEEEEec
Q 020798 224 LRLWNYSTGKILKTYTG 240 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~ 240 (321)
+.+||..+++.+.....
T Consensus 241 ~~~~d~~tg~~~~~~~l 257 (305)
T PF07433_consen 241 VAVWDAATGRLLGSVPL 257 (305)
T ss_pred EEEEECCCCCEeecccc
Confidence 99999999998877643
No 287
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.13 E-value=6.6e-08 Score=84.33 Aligned_cols=210 Identities=18% Similarity=0.240 Sum_probs=135.6
Q ss_pred cceeeeeccCCcccEEEEEECCCC------------CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDG------------RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDL 79 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g------------~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 79 (321)
.+++.+.++.|...|+.++|+|.. -+||++...|.|.+||.... ..+..+..|..++..+
T Consensus 44 s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~--------s~~~~l~~~~~~~qdl 115 (1062)
T KOG1912|consen 44 SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLA--------SVINWLSHSNDSVQDL 115 (1062)
T ss_pred hhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhh--------hhhhhhcCCCcchhhe
Confidence 456677888999999999998731 26788888999999987532 2344566677888888
Q ss_pred EECC---CC-CEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecC-------CC
Q 020798 80 VFSS---DS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVK-------TG 147 (321)
Q Consensus 80 ~~~~---~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~-------~~ 147 (321)
.|-+ +. ..|++-.....+.+|+..+|+.............|+.+.| |.+.+..-+..|.+.+-+.- .+
T Consensus 116 ~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pg 195 (1062)
T KOG1912|consen 116 CWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPG 195 (1062)
T ss_pred eeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCc
Confidence 8865 34 4566666778899999999987666555556677788887 44445444555666555431 12
Q ss_pred EEEEEEeCCCC-------------------------CeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCC
Q 020798 148 KCLKVLPAHSD-------------------------PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP 202 (321)
Q Consensus 148 ~~~~~~~~~~~-------------------------~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 202 (321)
+..+.-..|.+ ....++|+|.-+.++.......+.++|++-..++....-+. ..
T Consensus 196 k~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier-~~ 274 (1062)
T KOG1912|consen 196 KEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIER-GG 274 (1062)
T ss_pred eeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEecc-CC
Confidence 22222222211 01246778876666666667778999987665554443222 23
Q ss_pred eEEEEEccCC--CEEEEEecCCeEEEEeCC
Q 020798 203 VSFVKFSPNG--KFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 203 ~~~~~~~~~g--~~l~~~~~d~~i~i~d~~ 230 (321)
+..+.+-|++ ..|++...||.+.+|-.+
T Consensus 275 akfv~vlP~~~rd~LfclH~nG~ltirvrk 304 (1062)
T KOG1912|consen 275 AKFVDVLPDPRRDALFCLHSNGRLTIRVRK 304 (1062)
T ss_pred cceeEeccCCCcceEEEEecCCeEEEEEee
Confidence 4455565554 457778888888888543
No 288
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.13 E-value=2.9e-09 Score=80.91 Aligned_cols=204 Identities=16% Similarity=0.220 Sum_probs=117.4
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCC----CCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISN----SDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~----~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
++.+.++-+. .|+++-.++.+......+... .......+...+..|...-.+-+.+-.+..++++..||.+.+++
T Consensus 39 ~~~~~~v~~~-~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s 117 (319)
T KOG4714|consen 39 LSKVSLSAEY-ILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFS 117 (319)
T ss_pred EEEeechhhh-eeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEe
Confidence 5566665443 455555555554433222100 00011112233333433333333444566799999999999998
Q ss_pred cCCccee-eeee-cCcccEEEEEECCCCCEEEEeeC-----CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC-EEE
Q 020798 102 VPTATCL-KTLI-GHTNYVFCVNFNPQSNMIVSGAF-----DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT-MIV 173 (321)
Q Consensus 102 ~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 173 (321)
.+.-..+ ..+. .|.+. .+.++...++.+.++.. -+..+.|+++..+...........|++++-+|..+ .++
T Consensus 118 ~~~~~~~~~~i~~~~~~~-as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~ 196 (319)
T KOG4714|consen 118 TDKDLALMSRIPSIHSGS-ASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVC 196 (319)
T ss_pred chHHHhhhhhcccccccc-cccceeecccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEE
Confidence 7652111 1111 12211 12223334455544321 23455566554332221122234588899898755 566
Q ss_pred EEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCC
Q 020798 174 TSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~ 231 (321)
+|+.||.+.+||.++......++..+...+..+.|+| ++..|+++++||.+..||..+
T Consensus 197 cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 197 CGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred EecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 7889999999999987666666677888899999999 567899999999999999764
No 289
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.12 E-value=3.8e-08 Score=82.55 Aligned_cols=235 Identities=15% Similarity=0.240 Sum_probs=152.8
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-----------CCcEEEEecC
Q 020798 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-----------DETVRIWDVK 145 (321)
Q Consensus 77 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~~wd~~ 145 (321)
+-+.|||-|.||++--.-| |.+|--.+...++.+. |. .+.-+.|||+.++|++=+. ...+.+||++
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 4588999999999887766 8899766655444443 44 4778999999999987442 2579999999
Q ss_pred CCEEEEEEeCCCC--Ce-eEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec--
Q 020798 146 TGKCLKVLPAHSD--PV-TAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-- 220 (321)
Q Consensus 146 ~~~~~~~~~~~~~--~v-~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-- 220 (321)
+|.....++.... .+ .-+.|+.|+++++.-.. ..|.+|+..+-..+.. ..-....|....|+|.++.|+.-..
T Consensus 291 tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~-Kslki~gIr~FswsP~~~llAYwtpe~ 368 (698)
T KOG2314|consen 291 TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDK-KSLKISGIRDFSWSPTSNLLAYWTPET 368 (698)
T ss_pred ccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecc-cccCCccccCcccCCCcceEEEEcccc
Confidence 9998887765322 22 24689999998887666 5688998765322211 1112345778899999988876432
Q ss_pred ---CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEe----------CCCCeEEEEEcccceEEEEecCCC
Q 020798 221 ---DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG----------SEDSCVYLWELQSRKVVQKLEGHT 287 (321)
Q Consensus 221 ---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~dg~i~vwd~~~~~~~~~~~~h~ 287 (321)
-..+.+..+.+++.++.-..+.-.. +-+++-.+|.+|+.- +.-..+.|+.++.....-..-...
T Consensus 369 ~~~parvtL~evPs~~~iRt~nlfnVsD---ckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velk 445 (698)
T KOG2314|consen 369 NNIPARVTLMEVPSKREIRTKNLFNVSD---CKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELK 445 (698)
T ss_pred cCCcceEEEEecCccceeeeccceeeec---cEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecc
Confidence 1357777877777777654433221 112333567776642 112235666665544322222346
Q ss_pred CCeEEEEecCCCceEEEEe-ecCCccEEEcccc
Q 020798 288 DPVISVASHPTENIIASGA-LDNDRTVKIWTQE 319 (321)
Q Consensus 288 ~~v~~~~~~p~~~~l~s~~-~d~~~~i~iw~~~ 319 (321)
..|...+|-|.|+.+++-+ .+...++.+|-.|
T Consensus 446 e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e 478 (698)
T KOG2314|consen 446 ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVE 478 (698)
T ss_pred hheeeeeeccCCCeEEEEEccccccceeEEEee
Confidence 7899999999998877754 3334567777665
No 290
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.11 E-value=1.4e-09 Score=93.98 Aligned_cols=244 Identities=21% Similarity=0.365 Sum_probs=155.0
Q ss_pred cEEEEEECCCC--CE-EEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCCCcEEEE
Q 020798 25 AISSVKFSHDG--RL-LASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLW 100 (321)
Q Consensus 25 ~v~~~~~s~~g--~~-l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i~iw 100 (321)
.|....|+|.. .+ +++.+ ...-.+|.+.. .........+.+|..+|+++.|+|.. ..+++++.|..+..|
T Consensus 69 ~vad~qws~h~a~~~wiVsts-~qkaiiwnlA~-----ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~w 142 (1081)
T KOG0309|consen 69 QVADVQWSPHPAKPYWIVSTS-NQKAIIWNLAK-----SSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAW 142 (1081)
T ss_pred hhcceecccCCCCceeEEecC-cchhhhhhhhc-----CCccceEEEEecCccceeccccCCCCCcceeeccccccceee
Confidence 56778888754 33 44444 44445676653 12223334567999999999999865 478899999999999
Q ss_pred ecCCcc-eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccC-CCEEEEEeC
Q 020798 101 DVPTAT-CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRD-GTMIVTSSY 177 (321)
Q Consensus 101 d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~ 177 (321)
|+++.. +.............++|+-...-+.+.+....|++||++.+ .+...++.|...+..++|+.- ...+.+++.
T Consensus 143 d~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~ 222 (1081)
T KOG0309|consen 143 DMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSN 222 (1081)
T ss_pred eccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCC
Confidence 998764 34444444555677888765444445566778999999876 456677888888888888763 346778999
Q ss_pred CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEE--EecCCeEE---------EEeCCC-CcEEEEEeccCCce
Q 020798 178 DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV--GTLDNTLR---------LWNYST-GKILKTYTGHTNSK 245 (321)
Q Consensus 178 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~--~~~d~~i~---------i~d~~~-~~~~~~~~~~~~~~ 245 (321)
|+++++||................++..-.+.|-|.-..+ --.+..+. .|+..+ .+++..+.+|...+
T Consensus 223 d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V 302 (1081)
T KOG0309|consen 223 DGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVV 302 (1081)
T ss_pred CCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHH
Confidence 9999999986432222211223344555555553332211 11122333 333332 35788898887543
Q ss_pred eEEEeEEE---------ecCCeEEEEeCCCCeEEEEEccc
Q 020798 246 YCISSTFS---------VTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 246 ~~~~~~~~---------~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
. .+.|. ....-.|+|=+.|..+|+|-+.+
T Consensus 303 ~--eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 303 L--EFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred H--HHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 1 11111 01123689999999999998754
No 291
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.11 E-value=6.2e-08 Score=74.18 Aligned_cols=202 Identities=13% Similarity=0.064 Sum_probs=133.2
Q ss_pred EEEECCC-----CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEEC-CCCCEEEEEeCCCcEEEEe
Q 020798 28 SVKFSHD-----GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFS-SDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 28 ~~~~s~~-----g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~-~~~~~l~~~~~d~~i~iwd 101 (321)
.+.|-|. -.+||.|+.-|...+|.+...+ ..+.....|..+|.-+.=. ...-.+..++.|.++++.+
T Consensus 72 g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~-------~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~ 144 (344)
T KOG4532|consen 72 GMTFTPGSFINKCVTLADGGASGQFDLFACNTND-------GHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMV 144 (344)
T ss_pred cccccchHhhccccEEEeccccceeeeecccCcc-------cceeeecccccchhhhhhhcccccceeeccCCcceeEEE
Confidence 4566663 3589999999999999765322 1222233333333221111 1222466788999999998
Q ss_pred cCCcceeeeeecCcc--cEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-E-EE-EEeCCCCCeeEEEEccCCCEEEEEe
Q 020798 102 VPTATCLKTLIGHTN--YVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-C-LK-VLPAHSDPVTAVDFNRDGTMIVTSS 176 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~-~~-~~~~~~~~v~~~~~~~~~~~l~~~~ 176 (321)
++-+..... .|.. .+.++.++++++++++.+....|..|.+.... . .. ......+.-.+..|+.....++++.
T Consensus 145 ~~~~s~~~~--~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~ 222 (344)
T KOG4532|consen 145 VSGDSNKFA--VHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVF 222 (344)
T ss_pred EecCcccce--eeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEe
Confidence 865543222 2333 37889999999999999999999999886432 2 22 2223334456788999889999999
Q ss_pred CCCeEEEEeCCCCceee----eeccCCCCCeEEEEEccCCC--EEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 177 YDGLCRIWDASTGHCMK----TLIDDENPPVSFVKFSPNGK--FILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 177 ~dg~i~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~g~--~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
+||++.+||++.-.... .....+...+..+.|++.|. +|+..-.-+.+.+.|+++.+..+.+
T Consensus 223 Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I 290 (344)
T KOG4532|consen 223 QDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVI 290 (344)
T ss_pred cCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEE
Confidence 99999999998643222 12234567788999998664 3455445578999999988755544
No 292
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.10 E-value=4.1e-07 Score=70.59 Aligned_cols=240 Identities=13% Similarity=0.149 Sum_probs=127.3
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCccee
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL 108 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 108 (321)
++.+++|+.||+-- |..|.+=.-.+.... .....+..+.....-+.++|+||+.+||.+...|+|+++|+.....
T Consensus 3 ~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~s---i~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l- 77 (282)
T PF15492_consen 3 LALSSDGKLLAILQ-DQCIEIRSAKDDFSS---IIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL- 77 (282)
T ss_pred eeecCCCcEEEEEe-ccEEEEEeccCCchh---eeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccccee-
Confidence 57789999988764 666655432221100 0000111112223457899999999999999999999999875432
Q ss_pred eeee-------cCcccEEEEEECCC------CCEEEEeeCCCcEEEEecCC-----CEEEEEEe---CCCCCeeEEEEcc
Q 020798 109 KTLI-------GHTNYVFCVNFNPQ------SNMIVSGAFDETVRIWDVKT-----GKCLKVLP---AHSDPVTAVDFNR 167 (321)
Q Consensus 109 ~~~~-------~~~~~v~~~~~~~~------~~~l~~~~~dg~i~~wd~~~-----~~~~~~~~---~~~~~v~~~~~~~ 167 (321)
..+. .....|..+.|-+. ...|++-..+|.++-|-+.. .+....+. .+...|.++.|+|
T Consensus 78 f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p 157 (282)
T PF15492_consen 78 FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHP 157 (282)
T ss_pred EEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcC
Confidence 2221 11234555555432 22466667788887776532 22333332 2466899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEE--EEEecCC------eEEEEeCCCCcEEEEEe
Q 020798 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFI--LVGTLDN------TLRLWNYSTGKILKTYT 239 (321)
Q Consensus 168 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l--~~~~~d~------~i~i~d~~~~~~~~~~~ 239 (321)
..++|++|+.... ..+. .......++....-.+..+. ++...|+ +..+|.+.+.+......
T Consensus 158 ~h~LLlVgG~~~~------~~~~-----s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~ 226 (282)
T PF15492_consen 158 KHRLLLVGGCEQN------QDGM-----SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQG 226 (282)
T ss_pred CCCEEEEeccCCC------CCcc-----ccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccc
Confidence 9888887764322 0000 00111122222221111111 1111111 11223222211111111
Q ss_pred ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC
Q 020798 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287 (321)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~ 287 (321)
.....++. .-..|||..||+...+|.|.+|++.+-++..+..-+.
T Consensus 227 ~~~d~i~k---mSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 227 QEQDGIFK---MSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred cCCCceEE---EEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence 11222222 2335899999999999999999998877766555443
No 293
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=5.5e-09 Score=85.28 Aligned_cols=253 Identities=19% Similarity=0.239 Sum_probs=167.4
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-CCcEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-DKTIRL 99 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-d~~i~i 99 (321)
.|...|+.+.-. -.+++.+++.||.++.|....... .+.+..+..|-..|.+++.+-++..+.+.+. |..+++
T Consensus 7 mhrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isG-----vEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~Kv 80 (558)
T KOG0882|consen 7 MHRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISG-----VEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKV 80 (558)
T ss_pred cccceeeeEeee-hhheEEeeecchhhhhcCCCCccc-----eeehhhhHHHHHHHHhhhccccceeEeeccCcccceeE
Confidence 477777776543 457899999999999996543221 2234556678888999999999999999777 999999
Q ss_pred EecCCcceeeeee--cCcccEEEEEECCCC--CEEE-EeeCCCcEEEEecCCCE--EEEEEeCCCCCeeEEEEccCCCEE
Q 020798 100 WDVPTATCLKTLI--GHTNYVFCVNFNPQS--NMIV-SGAFDETVRIWDVKTGK--CLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 100 wd~~~~~~~~~~~--~~~~~v~~~~~~~~~--~~l~-~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
+|+++.....-+. -....+ ++..++.. ..++ +.-.++.+.++|-.... ....-..|..+|..+.+++.+..+
T Consensus 81 fDvEn~DminmiKL~~lPg~a-~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~ 159 (558)
T KOG0882|consen 81 FDVENFDMINMIKLVDLPGFA-EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSA 159 (558)
T ss_pred EEeeccchhhhcccccCCCce-EEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccce
Confidence 9987765332221 111222 12222221 1233 33467889999976543 233345689999999999999999
Q ss_pred EEEeCCCeEEEEeCCC-Cceeee-----e--------ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 173 VTSSYDGLCRIWDAST-GHCMKT-----L--------IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~-~~~~~~-----~--------~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
++....|.|..|.... -+..+. + .........++.|+|+|..+.+-..|..|++++.+++++++.+
T Consensus 160 vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqei 239 (558)
T KOG0882|consen 160 VSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEI 239 (558)
T ss_pred eeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhh
Confidence 9999999999998763 111111 0 0111234567899999999999899999999999998766554
Q ss_pred eccC-------------------------------CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEE
Q 020798 239 TGHT-------------------------------NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282 (321)
Q Consensus 239 ~~~~-------------------------------~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 282 (321)
.... +.......+ +...+.+|+-|+-=| |+|.++.++.+...
T Consensus 240 DE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~-fdes~~flly~t~~g-ikvin~~tn~v~ri 312 (558)
T KOG0882|consen 240 DEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAV-FDESGNFLLYGTILG-IKVINLDTNTVVRI 312 (558)
T ss_pred hccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeE-EcCCCCEEEeeccee-EEEEEeecCeEEEE
Confidence 3110 001111222 235677888777655 78888887765543
No 294
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.07 E-value=2.9e-07 Score=76.63 Aligned_cols=238 Identities=17% Similarity=0.221 Sum_probs=148.7
Q ss_pred ccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC---------------
Q 020798 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD--------------- 136 (321)
Q Consensus 72 h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------- 136 (321)
-.-++..+.|||.|.+|++....+ |.+|.-.....+..+. ...|..+.|+|.+++|.+=+..
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~ 107 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSK 107 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchhheeeee--cCCceecccCcccceeeeeccCCccChhhccCCcccc
Confidence 345678899999999998776554 8899877765444433 3457889999999999874433
Q ss_pred CcEEEEecCCCEEEEEEeCCCCC--ee-EEEEccCCCEEEEEeCCCeEEEEeCCCCceee-eeccCCCCCeEEEEEccCC
Q 020798 137 ETVRIWDVKTGKCLKVLPAHSDP--VT-AVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKFSPNG 212 (321)
Q Consensus 137 g~i~~wd~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~g 212 (321)
..+.+||+.++..+..+.....+ .+ -+.|+-+..+++-. -...++++++ ++.... .+..-....+....++|.+
T Consensus 108 n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~ 185 (561)
T COG5354 108 NNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEG 185 (561)
T ss_pred CceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhccccceeeEEecCCC
Confidence 35999999999998887665555 44 57788777665533 3346888886 322111 1111112356777888864
Q ss_pred --CEEEE-----EecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEe-----------CCCCeEEEEEc
Q 020798 213 --KFILV-----GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG-----------SEDSCVYLWEL 274 (321)
Q Consensus 213 --~~l~~-----~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~dg~i~vwd~ 274 (321)
..|+. .+..+++++|.+...+.+.+-.-..... +..-+. ..|.+|+.- -....++++++
T Consensus 186 n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~--~qLkW~-~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~ 262 (561)
T COG5354 186 NHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSG--VQLKWQ-VLGKYLLVLVMTHTKSNKSYFGESNLYLLRI 262 (561)
T ss_pred CCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecc--cEEEEe-cCCceEEEEEEEeeecccceeccceEEEEee
Confidence 33433 3456789999998776655432211111 111122 234333311 02346888888
Q ss_pred ccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 275 QSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 275 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
..... .......++|.+.+|.|+++.+++.+--.+..+.++++
T Consensus 263 ~e~~i-~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~l 305 (561)
T COG5354 263 TERSI-PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDL 305 (561)
T ss_pred ccccc-ceeccccccceeeeecccCCceeEEecccccceeeccc
Confidence 74433 22225678999999999999988876223345555554
No 295
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.07 E-value=2.2e-07 Score=76.77 Aligned_cols=149 Identities=17% Similarity=0.236 Sum_probs=112.1
Q ss_pred CCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCC-cEEEEecCCCEEEEEEeCCCCCeeE
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE-TVRIWDVKTGKCLKVLPAHSDPVTA 162 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~wd~~~~~~~~~~~~~~~~v~~ 162 (321)
+|.+++..+. |+..|.+.-.+-.+ ..+|...|.-..+..+++-++.|..|| .+-++|..+++. +.+...-+.|.+
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~~~~i--qv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~a 406 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWDGYSI--QVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEA 406 (668)
T ss_pred CCcEEEEEec-CcEEEECCCCCeeE--EcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEE
Confidence 5778877665 55555554333322 235666787777877778888899999 899999887764 445556678999
Q ss_pred EEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC----eEEEEeCCCCcEEEE
Q 020798 163 VDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN----TLRLWNYSTGKILKT 237 (321)
Q Consensus 163 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~----~i~i~d~~~~~~~~~ 237 (321)
+..+|+|+.++++.....+.+.|+.++.... +-.....-|..+.|+|++++++-+-.+| .|+++|+..++....
T Consensus 407 v~vs~dGK~~vvaNdr~el~vididngnv~~-idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~v 484 (668)
T COG4946 407 VKVSPDGKKVVVANDRFELWVIDIDNGNVRL-IDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDV 484 (668)
T ss_pred EEEcCCCcEEEEEcCceEEEEEEecCCCeeE-ecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEe
Confidence 9999999999999999999999999886432 2233345588899999999999887665 699999988776543
No 296
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.05 E-value=1.1e-06 Score=68.34 Aligned_cols=220 Identities=17% Similarity=0.277 Sum_probs=125.4
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCc--ceeeeee---cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 79 LVFSSDSRFLVSASDDKTIRLWDVPTA--TCLKTLI---GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 79 ~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
++.+.+|+.||. -.|..|.|-..+.. .++.... .....-..++|+||+..|+.+...|+|+++|+...++ ..+
T Consensus 3 ~~~~~~Gk~lAi-~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l-f~I 80 (282)
T PF15492_consen 3 LALSSDGKLLAI-LQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL-FVI 80 (282)
T ss_pred eeecCCCcEEEE-EeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccccee-EEc
Confidence 566788987764 46667777654332 1222222 2233457899999999999999999999999875443 333
Q ss_pred eC-------CCCCeeEEEEccC------CCEEEEEeCCCeEEEEeCCC-----Cceeee--eccCCCCCeEEEEEccCCC
Q 020798 154 PA-------HSDPVTAVDFNRD------GTMIVTSSYDGLCRIWDAST-----GHCMKT--LIDDENPPVSFVKFSPNGK 213 (321)
Q Consensus 154 ~~-------~~~~v~~~~~~~~------~~~l~~~~~dg~i~~~d~~~-----~~~~~~--~~~~~~~~~~~~~~~~~g~ 213 (321)
+. -..+|..+.|.+. ...|++-..+|.++=|-+.. .+.... +.......|..+.++|..+
T Consensus 81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~ 160 (282)
T PF15492_consen 81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHR 160 (282)
T ss_pred CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCC
Confidence 21 1245666666542 12567777888777665421 111111 2223345789999999999
Q ss_pred EEEEEecCCe-----------EEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEE
Q 020798 214 FILVGTLDNT-----------LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282 (321)
Q Consensus 214 ~l~~~~~d~~-----------i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 282 (321)
+|++|+.... +.-|.+-++.+ +..... . .+...-.... +-.+|.+-+.+...+
T Consensus 161 LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~P-----------yyk~v~-~-~~~~~~~~~~---~~~~~~~~~~~~fs~ 224 (282)
T PF15492_consen 161 LLLVGGCEQNQDGMSKASSCGLTAWRILSDSP-----------YYKQVT-S-SEDDITASSK---RRGLLRIPSFKFFSR 224 (282)
T ss_pred EEEEeccCCCCCccccccccCceEEEEcCCCC-----------cEEEcc-c-cCcccccccc---ccceeeccceeeeec
Confidence 9888764321 22222211111 110000 0 0011001111 123444433333222
Q ss_pred ecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 283 LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 283 ~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
.......|..+..||||..||+.+.+ |.|.+|++
T Consensus 225 ~~~~~d~i~kmSlSPdg~~La~ih~s--G~lsLW~i 258 (282)
T PF15492_consen 225 QGQEQDGIFKMSLSPDGSLLACIHFS--GSLSLWEI 258 (282)
T ss_pred cccCCCceEEEEECCCCCEEEEEEcC--CeEEEEec
Confidence 23345679999999999999999864 89999986
No 297
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.05 E-value=2.3e-06 Score=68.44 Aligned_cols=198 Identities=18% Similarity=0.186 Sum_probs=125.6
Q ss_pred EEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEEC-CCCCEEEEEeCCCcEEEEecCCc
Q 020798 28 SVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFS-SDSRFLVSASDDKTIRLWDVPTA 105 (321)
Q Consensus 28 ~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~ 105 (321)
+++|.+ ++.++++--..+.|..|+..... ...+.. .....+++. +++++++ +... .+.++|..++
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~---------~~~~~~--~~~~G~~~~~~~g~l~v-~~~~-~~~~~d~~~g 70 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGE---------VEVIDL--PGPNGMAFDRPDGRLYV-ADSG-GIAVVDPDTG 70 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTE---------EEEEES--SSEEEEEEECTTSEEEE-EETT-CEEEEETTTT
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCe---------EEEEec--CCCceEEEEccCCEEEE-EEcC-ceEEEecCCC
Confidence 568888 77777777778888888764321 111111 126677777 6655444 4444 4566698887
Q ss_pred ceeeeeec-----CcccEEEEEECCCCCEEEEeeCC--------CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 106 TCLKTLIG-----HTNYVFCVNFNPQSNMIVSGAFD--------ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 106 ~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
+....... .....+.+++.|+|++.++.... |.|..++.. ++...... .-.....++|+|+++.|
T Consensus 71 ~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~l 148 (246)
T PF08450_consen 71 KVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTL 148 (246)
T ss_dssp EEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEE
T ss_pred cEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchhe
Confidence 54332221 34567889999999977775543 557777766 55333332 23456789999999876
Q ss_pred E-EEeCCCeEEEEeCCCCc--e--eeeeccCCC--CCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 173 V-TSSYDGLCRIWDASTGH--C--MKTLIDDEN--PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 173 ~-~~~~dg~i~~~d~~~~~--~--~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
+ +-+..+.|..+++.... . ...+..... .....++++.+|++.++....+.|.++|.. ++.+..+...
T Consensus 149 yv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p 223 (246)
T PF08450_consen 149 YVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELP 223 (246)
T ss_dssp EEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-S
T ss_pred eecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCC
Confidence 5 55678889988885321 1 122211112 236789999999988877788999999977 8888877655
No 298
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=2e-10 Score=101.03 Aligned_cols=219 Identities=17% Similarity=0.313 Sum_probs=154.8
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CC-cEEEE
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DE-TVRIW 142 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg-~i~~w 142 (321)
+...+..|....+|++|+...++|+.|+-.|.|++|++.++.......+|.++++.+.-+-+|..+++.+. .. ...+|
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHh
Confidence 45567778899999999999999999999999999999999988889999999999999999987665543 33 45789
Q ss_pred ecCC-CEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCC---CCCeEEEEEccCCCEEEEE
Q 020798 143 DVKT-GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE---NPPVSFVKFSPNGKFILVG 218 (321)
Q Consensus 143 d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~ 218 (321)
++.+ +.....+ ..-.++.|+.....-+.|+......+||+.++....+++... ...-+.+.|+|+..+++-
T Consensus 1173 ~~~s~~~~~Hsf----~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln- 1247 (1516)
T KOG1832|consen 1173 DASSTGGPRHSF----DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN- 1247 (1516)
T ss_pred ccccccCccccc----cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee-
Confidence 8754 2223333 234567887664444556665678899999887665543321 223366889999887763
Q ss_pred ecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCC
Q 020798 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPT 298 (321)
Q Consensus 219 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~ 298 (321)
|| .+||++..+.++.|..... .+...| .|+|..++..+. |||+++.++++...... -..+.|+..
T Consensus 1248 --dG--vLWDvR~~~aIh~FD~ft~---~~~G~F-HP~g~eVIINSE-----IwD~RTF~lLh~VP~Ld--qc~VtFNst 1312 (1516)
T KOG1832|consen 1248 --DG--VLWDVRIPEAIHRFDQFTD---YGGGGF-HPSGNEVIINSE-----IWDMRTFKLLHSVPSLD--QCAVTFNST 1312 (1516)
T ss_pred --Cc--eeeeeccHHHHhhhhhhee---cccccc-cCCCceEEeech-----hhhhHHHHHHhcCcccc--ceEEEeccC
Confidence 55 5899998877777654332 122233 366777776654 89999988876554432 356777777
Q ss_pred CceEE
Q 020798 299 ENIIA 303 (321)
Q Consensus 299 ~~~l~ 303 (321)
|+.+-
T Consensus 1313 G~VmY 1317 (1516)
T KOG1832|consen 1313 GDVMY 1317 (1516)
T ss_pred ccchh
Confidence 76543
No 299
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.02 E-value=1.3e-07 Score=82.62 Aligned_cols=239 Identities=14% Similarity=0.159 Sum_probs=158.9
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC------------CEEEEEeC
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS------------RFLVSASD 93 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~------------~~l~~~~~ 93 (321)
-.++.|+|.| +||.|+ ...|.+-|. ...+.++.+..|...|..+.|.|.. -.||++..
T Consensus 18 ~~A~Dw~~~G-LiAygs-hslV~VVDs--------~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~ 87 (1062)
T KOG1912|consen 18 RNAADWSPSG-LIAYGS-HSLVSVVDS--------RSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI 87 (1062)
T ss_pred ccccccCccc-eEEEec-CceEEEEeh--------hhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccc
Confidence 5568899988 466665 344555543 2344577788899999999998621 14667777
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECC---CC-CEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc-C
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP---QS-NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-D 168 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~ 168 (321)
.|.|.+||...+..+..+..|...+..++|-| +. ..|++-.....+.+|+..+|+..-...-......++.+.| +
T Consensus 88 ~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd 167 (1062)
T KOG1912|consen 88 SGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFD 167 (1062)
T ss_pred cCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCC
Confidence 89999999988877777778888888888865 23 4566667778999999999987766554445566788888 4
Q ss_pred CCEEEEEeCCCeEEEEeCCC-------CceeeeeccCCC-------------------CC------eEEEEEccCCCEEE
Q 020798 169 GTMIVTSSYDGLCRIWDAST-------GHCMKTLIDDEN-------------------PP------VSFVKFSPNGKFIL 216 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~-------~~~~~~~~~~~~-------------------~~------~~~~~~~~~g~~l~ 216 (321)
.+.+..-+..|.+.+-+.-. ++.++ +..++. .. ...++|+|.-+.++
T Consensus 168 ~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~q-I~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~l 246 (1062)
T KOG1912|consen 168 SRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQ-ITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNIL 246 (1062)
T ss_pred cceEEEEccCceEEEEeccCCCCCCCCceeEE-EecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceE
Confidence 55676666667666655321 11111 111100 00 11256788766555
Q ss_pred EEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 217 VGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 217 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
.......+.++|++-...+....-..+....+...- .+....|.+.-.||.+.+|--+.
T Consensus 247 fi~~prellv~dle~~~~l~vvpier~~akfv~vlP-~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 247 FITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLP-DPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred EEEeccceEEEcchhhceeEEEEeccCCcceeEecc-CCCcceEEEEecCCeEEEEEeec
Confidence 566677899999987777776655444333343321 23456788999999999997644
No 300
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=9.6e-08 Score=77.15 Aligned_cols=291 Identities=19% Similarity=0.216 Sum_probs=159.7
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeecccc--------CCCCCCCCCcccccccccccEEEEEECCCCC-EEEEEe
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSI--------SNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR-FLVSAS 92 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~--------~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~~~~ 92 (321)
|...-.++.+++..++++.+-.-..+.+-..... ...+.....+.+.+..|...|.+++|+|..+ ++..++
T Consensus 134 h~qk~f~v~r~~gcrli~y~~~~s~lv~sQks~qa~lpGvGv~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~as 213 (463)
T KOG1645|consen 134 HKQKSFSVGRNAGCRLIGYDESSSTLVVSQKSGQALLPGVGVQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLAS 213 (463)
T ss_pred hcccceeeeecCCceEEecccccceeeeeccchhhcCCccceEEeccCCcchhhcccccchhhhhhccCccccceeeeec
Confidence 5555666777766655554433322222111100 0112223334556677888999999999877 678899
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEE-EEEe--CCCCCeeEEEEc--
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCL-KVLP--AHSDPVTAVDFN-- 166 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~-~~~~--~~~~~v~~~~~~-- 166 (321)
.+..|+|.|+++..+...+..+ ..+++++|.-+. +++.+|...|.|.+||++..+-. ..+. ....+|..++..
T Consensus 214 l~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~ 292 (463)
T KOG1645|consen 214 LGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQP 292 (463)
T ss_pred cCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCc
Confidence 9999999999999888888877 678999998875 56778889999999999865422 1111 112334443332
Q ss_pred ----cCCCEEEEEeCCCeEEEEeCCCC--ceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCC---eEE---E-EeCCCC
Q 020798 167 ----RDGTMIVTSSYDGLCRIWDASTG--HCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDN---TLR---L-WNYSTG 232 (321)
Q Consensus 167 ----~~~~~l~~~~~dg~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~---~i~---i-~d~~~~ 232 (321)
+.+.+++....+ +..|.+... ........+.......+.+++..+.++... .+. +++ . -|..+|
T Consensus 293 n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG 370 (463)
T KOG1645|consen 293 NKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDG 370 (463)
T ss_pred cccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccC
Confidence 234444444332 345554321 111111111122334455555444444432 211 011 1 122233
Q ss_pred cEEEEEe-ccCCce----eEEEeEEEecCCeE-EEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCC--CceEEE
Q 020798 233 KILKTYT-GHTNSK----YCISSTFSVTNGKY-IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPT--ENIIAS 304 (321)
Q Consensus 233 ~~~~~~~-~~~~~~----~~~~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~s 304 (321)
..+-.-. .+.+.. ..-...+.+++..+ +..|.+.+.+.+||..+.+.++.+.- ..+|.++..... +.+|++
T Consensus 371 ~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~-~epv~Dicp~~~n~~syLa~ 449 (463)
T KOG1645|consen 371 FPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQTLAL-SEPVLDICPNDTNGSSYLAL 449 (463)
T ss_pred ceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEeccchhheeeeccc-CcceeecceeecCCcchhhh
Confidence 3222111 110100 00011122233344 44566778899999999999888764 478888865433 356666
Q ss_pred EeecCCccEEEcccc
Q 020798 305 GALDNDRTVKIWTQE 319 (321)
Q Consensus 305 ~~~d~~~~i~iw~~~ 319 (321)
=. |..++||.-|
T Consensus 450 LT---d~~v~Iyk~e 461 (463)
T KOG1645|consen 450 LT---DDRVHIYKNE 461 (463)
T ss_pred ee---cceEEEEecC
Confidence 43 4578888765
No 301
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.00 E-value=3.7e-07 Score=70.06 Aligned_cols=217 Identities=11% Similarity=-0.006 Sum_probs=132.8
Q ss_pred CEEEEEeCCCcEEEEecCCccee-eeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCC--Cee
Q 020798 86 RFLVSASDDKTIRLWDVPTATCL-KTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD--PVT 161 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~--~v~ 161 (321)
-+|+.|+..|.+.+|...+.+.. +....|...|.-+.-.-+ ...+..++.|.++++.++..+..... .|.. .+.
T Consensus 85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~--~h~~~~~~n 162 (344)
T KOG4532|consen 85 VTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFA--VHNQNLTQN 162 (344)
T ss_pred cEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccce--eecccccee
Confidence 47899999999999998866532 222333332221111111 23466678888888888765543322 2333 378
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCC-ceeee-eccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE-
Q 020798 162 AVDFNRDGTMIVTSSYDGLCRIWDASTG-HCMKT-LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY- 238 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~- 238 (321)
+++++++++++++.+....|..|.+... +.... ........--+..|+.....++++..||++.|||++........
T Consensus 163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~ 242 (344)
T KOG4532|consen 163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI 242 (344)
T ss_pred eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhh
Confidence 8999999999999999999999988542 22222 22222222346789999999999999999999999875432221
Q ss_pred ---ec-cCCceeEEEeEEEecCC--eEEEEeCCCCeEEEEEcccceEEEEe-------cCCC-CCeEEEEecCCCceEEE
Q 020798 239 ---TG-HTNSKYCISSTFSVTNG--KYIVSGSEDSCVYLWELQSRKVVQKL-------EGHT-DPVISVASHPTENIIAS 304 (321)
Q Consensus 239 ---~~-~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~-------~~h~-~~v~~~~~~p~~~~l~s 304 (321)
.. |.+. +..+.+.+.| .+|...-.-+.+.|.|+++.+..+.+ ..|. +.|....|+.++.-.-+
T Consensus 243 sstrp~hnGa---~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v 319 (344)
T KOG4532|consen 243 SSTRPHHNGA---FRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDV 319 (344)
T ss_pred cccCCCCCCc---eEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCccccc
Confidence 12 2222 2222222222 34554555678999999987644332 2233 34777778777655544
Q ss_pred Eee
Q 020798 305 GAL 307 (321)
Q Consensus 305 ~~~ 307 (321)
..+
T Consensus 320 ~~e 322 (344)
T KOG4532|consen 320 KNE 322 (344)
T ss_pred ccc
Confidence 443
No 302
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.99 E-value=1.2e-06 Score=75.13 Aligned_cols=259 Identities=12% Similarity=0.068 Sum_probs=144.9
Q ss_pred CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEE-EEECCCCCEEEEEeCCCcEEEEecCCcceeeeeec
Q 020798 35 GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSD-LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG 113 (321)
Q Consensus 35 g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 113 (321)
+..++.++.++.+..+|..+.+... ..... ..+.+ ... .+..++.+..++.+..+|..+++.+.....
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W--------~~~~~-~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 188 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAW--------QTKVA-GEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNL 188 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcc--------cccCC-CceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecC
Confidence 4456667778888877765432211 11111 11111 111 134566678889999999999987655432
Q ss_pred CcccEE-EEEECC--CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCC-------CeeEEEEcc--CCCEEEEEeCCCeE
Q 020798 114 HTNYVF-CVNFNP--QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD-------PVTAVDFNR--DGTMIVTSSYDGLC 181 (321)
Q Consensus 114 ~~~~v~-~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-------~v~~~~~~~--~~~~l~~~~~dg~i 181 (321)
...... ...-+| .+..++.+..++.+..+|..+++..-....... ....+..+| .+..++.++.+|.+
T Consensus 189 ~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l 268 (394)
T PRK11138 189 DVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNL 268 (394)
T ss_pred CCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeE
Confidence 211100 000111 134566677889999999988875543321100 001111122 24567777889999
Q ss_pred EEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEE
Q 020798 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261 (321)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 261 (321)
..+|..+++..-+.... . ...+. ..+..++.++.++.+..+|..+++.+-......... ...... .+..++
T Consensus 269 ~ald~~tG~~~W~~~~~--~-~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~--~~sp~v--~~g~l~ 339 (394)
T PRK11138 269 VALDLRSGQIVWKREYG--S-VNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRL--LTAPVL--YNGYLV 339 (394)
T ss_pred EEEECCCCCEEEeecCC--C-ccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCc--ccCCEE--ECCEEE
Confidence 99999988765432211 1 11111 245577788889999999999988765432111111 111111 245677
Q ss_pred EeCCCCeEEEEEcccceEEEEecCCCCCeEE-EEecCCCceEEEEeecCCccEEEcc
Q 020798 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVIS-VASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 262 ~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
.++.+|.|.+.|..+++.+.+.+-....+.+ -.+ .++ .|..++ .+|.|..++
T Consensus 340 v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~-~~~-~l~v~t--~~G~l~~~~ 392 (394)
T PRK11138 340 VGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV-ADD-KLLIQA--RDGTVYAIT 392 (394)
T ss_pred EEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE-ECC-EEEEEe--CCceEEEEe
Confidence 7899999999999999988776544333332 122 234 455555 457777654
No 303
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.98 E-value=5.8e-06 Score=66.17 Aligned_cols=224 Identities=15% Similarity=0.201 Sum_probs=140.8
Q ss_pred EEEEECC-CCCEEEEEeCCCc-EEEEecCCcceeeeeecCcccEE--EEEECCCCCEEEEee-----CCCcEEEEecC-C
Q 020798 77 SDLVFSS-DSRFLVSASDDKT-IRLWDVPTATCLKTLIGHTNYVF--CVNFNPQSNMIVSGA-----FDETVRIWDVK-T 146 (321)
Q Consensus 77 ~~~~~~~-~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~-----~dg~i~~wd~~-~ 146 (321)
..++.+| ....++.+-.-|. ..+||..+++....+....+.-+ --.|++||++|++.- ..|.|-|||.. +
T Consensus 8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~ 87 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG 87 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC
Confidence 4577888 4455666666554 67789988876655433222211 246899999998864 35889999998 5
Q ss_pred CEEEEEEeCCCCCeeEEEEccCCCEEEEEe------------------CCCeEEEEeCCCCceeeeec---cCCCCCeEE
Q 020798 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSS------------------YDGLCRIWDASTGHCMKTLI---DDENPPVSF 205 (321)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~dg~i~~~d~~~~~~~~~~~---~~~~~~~~~ 205 (321)
-+.+..++.|.-.-..+.+.||++.|+++. .+..+.+.|..+++.+.+.. ..+...+..
T Consensus 88 ~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRH 167 (305)
T PF07433_consen 88 YRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRH 167 (305)
T ss_pred cEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceee
Confidence 677778888777778899999997776652 12235556677777665532 224456888
Q ss_pred EEEccCCCEEEEEecCCe-------EEEEeCCCCcEEEEEeccC-----CceeEEEeEEEecCCeEEEEeC-CCCeEEEE
Q 020798 206 VKFSPNGKFILVGTLDNT-------LRLWNYSTGKILKTYTGHT-----NSKYCISSTFSVTNGKYIVSGS-EDSCVYLW 272 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~d~~-------i~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~-~dg~i~vw 272 (321)
+++.++|..++..-..+. +-+++ .++.+..+.... -..|+-+..+ ..++..+++.+ .-+.+.+|
T Consensus 168 La~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~-~~~g~~ia~tsPrGg~~~~~ 244 (305)
T PF07433_consen 168 LAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAA-DRDGRLIAVTSPRGGRVAVW 244 (305)
T ss_pred EEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEE-eCCCCEEEEECCCCCEEEEE
Confidence 999999987766544332 33333 222222222111 1123333333 35666665444 56789999
Q ss_pred EcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 273 ELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 273 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
|..+++++....- ..+..++-.+++ ++++.+
T Consensus 245 d~~tg~~~~~~~l--~D~cGva~~~~~-f~~ssG 275 (305)
T PF07433_consen 245 DAATGRLLGSVPL--PDACGVAPTDDG-FLVSSG 275 (305)
T ss_pred ECCCCCEeecccc--CceeeeeecCCc-eEEeCC
Confidence 9999998765432 346777777776 666654
No 304
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.97 E-value=9e-09 Score=78.27 Aligned_cols=160 Identities=18% Similarity=0.211 Sum_probs=100.2
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe-----CCCc
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS-----DDKT 96 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~-----~d~~ 96 (321)
|.++-.+-+.+--++.+++++.||.+.+++........ .....-..+-.+.++...++++.++. .-+.
T Consensus 88 ~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~-------~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~ 160 (319)
T KOG4714|consen 88 NSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALM-------SRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDN 160 (319)
T ss_pred cCCCCCcccccccCCceEecCCCceEEEEechHHHhhh-------hhcccccccccccceeecccEEecCCcceEeeccc
Confidence 44433333444456789999999999999765421111 11111111122233334455554432 2234
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEE-EEEEeCCCCCeeEEEEccC-CCEEE
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKC-LKVLPAHSDPVTAVDFNRD-GTMIV 173 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~v~~~~~~~~-~~~l~ 173 (321)
.++|+++..+.+.....-...+.+++-+|.. +.+++|+.||.+-+||.+.... ...+..|+.+++.+-|+|. +..|+
T Consensus 161 ~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lf 240 (319)
T KOG4714|consen 161 FYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLF 240 (319)
T ss_pred eeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchhee
Confidence 5666665443222111122338888888854 5677888999999999987643 3456789999999999995 56899
Q ss_pred EEeCCCeEEEEeCCC
Q 020798 174 TSSYDGLCRIWDAST 188 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~ 188 (321)
++++||.+..||..+
T Consensus 241 t~sedGslw~wdas~ 255 (319)
T KOG4714|consen 241 TCSEDGSLWHWDAST 255 (319)
T ss_pred EecCCCcEEEEcCCC
Confidence 999999999999874
No 305
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.97 E-value=3.4e-09 Score=83.66 Aligned_cols=161 Identities=17% Similarity=0.290 Sum_probs=119.0
Q ss_pred EEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCC-----ceeeeeccCCCCCeEE
Q 020798 131 VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG-----HCMKTLIDDENPPVSF 205 (321)
Q Consensus 131 ~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-----~~~~~~~~~~~~~~~~ 205 (321)
++.+.+..+-+-++.++.... +. ..+.|.++.|...++++..|..+|.|...|++.. .+...+ .+...+++
T Consensus 228 fs~G~sqqv~L~nvetg~~qs-f~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl--yh~Ssvts 303 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQS-FQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL--YHDSSVTS 303 (425)
T ss_pred ecccccceeEEEEeecccccc-cc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE--EcCcchhh
Confidence 555667778888888775332 32 4567888999988899999999999999999854 233333 24556777
Q ss_pred EEEcc-CCCEEEEEecCCeEEEEeCCCCcE---EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE
Q 020798 206 VKFSP-NGKFILVGTLDNTLRLWNYSTGKI---LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ 281 (321)
Q Consensus 206 ~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (321)
+..-. ++++|++.+.+|+|++||.+.-+. +.++.+|.+....+..... +....+++++.|...|||.++.+.++.
T Consensus 304 lq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~-~eeg~I~s~GdDcytRiWsl~~ghLl~ 382 (425)
T KOG2695|consen 304 LQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVK-EEEGSIFSVGDDCYTRIWSLDSGHLLC 382 (425)
T ss_pred hhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccc-cccceEEEccCeeEEEEEecccCceee
Confidence 76666 788999999999999999986655 8999999876544443333 345567779999999999999999887
Q ss_pred EecCC----CCCeEEEEec
Q 020798 282 KLEGH----TDPVISVASH 296 (321)
Q Consensus 282 ~~~~h----~~~v~~~~~~ 296 (321)
++.-. ...+.+++|.
T Consensus 383 tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 383 TIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred ccCCCCccccccccceehh
Confidence 76532 2345667764
No 306
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.97 E-value=2.5e-08 Score=88.29 Aligned_cols=149 Identities=19% Similarity=0.332 Sum_probs=116.5
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC---------CCcEEEEecC
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF---------DETVRIWDVK 145 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~~wd~~ 145 (321)
+|.-|. .+++++.+|...|+|.+-|..+.+.++++.+|++.+..+. -.|+.|++||. |..|+|||++
T Consensus 179 ~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLR 254 (1118)
T KOG1275|consen 179 GVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLR 254 (1118)
T ss_pred ceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeee--ccCCeEEEeecccccccccccchhhhhhhh
Confidence 344444 3678999999999999999999999999999999987654 45899999876 4568899999
Q ss_pred CCEEEEEEeCCCCCeeEEEEccC-CCEEEEEeCCCeEEEEe---CCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRD-GTMIVTSSYDGLCRIWD---ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d 221 (321)
..+.+..++.+.++ .-+.|+|. ...+++++..|...+-| +.+......+.....+.+..+.++++|+.++.+..+
T Consensus 255 mmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~ 333 (1118)
T KOG1275|consen 255 MMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHE 333 (1118)
T ss_pred hhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEeccc
Confidence 88777666666555 45678886 45788899999999988 443322233333445558889999999999999999
Q ss_pred CeEEEEe
Q 020798 222 NTLRLWN 228 (321)
Q Consensus 222 ~~i~i~d 228 (321)
|.|.+|.
T Consensus 334 g~v~~wa 340 (1118)
T KOG1275|consen 334 GHVNLWA 340 (1118)
T ss_pred CcEeeec
Confidence 9999997
No 307
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.92 E-value=9.5e-07 Score=70.33 Aligned_cols=190 Identities=21% Similarity=0.167 Sum_probs=118.3
Q ss_pred CCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE-eCCC--C-C
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL-PAHS--D-P 159 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~--~-~ 159 (321)
++..+++++.++.+..||..+++.+............. ...+..++.+..++.++.+|..+++..-.. .... . .
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~--~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~ 112 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAP--VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV 112 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGE--EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeecccccccee--eecccccccccceeeeEecccCCcceeeeecccccccccc
Confidence 55667777899999999999998766554321111111 123556777778889999999999887763 3221 1 1
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCC---------eEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP---------VSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~---------~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
.........+..++++..++.+..+|+++++.+.......... ...-....++ .++.+..++.+.-+|+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~ 191 (238)
T PF13360_consen 113 RSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLA 191 (238)
T ss_dssp B--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETT
T ss_pred ccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECC
Confidence 1122233347788888889999999999998765553322111 1111222244 67777777754444999
Q ss_pred CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEE
Q 020798 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282 (321)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 282 (321)
+++.+-... ..... ... ..++..|+.++.++.|..||+++++.+..
T Consensus 192 tg~~~w~~~--~~~~~---~~~-~~~~~~l~~~~~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 192 TGEKLWSKP--ISGIY---SLP-SVDGGTLYVTSSDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp TTEEEEEEC--SS-EC---ECE-ECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred CCCEEEEec--CCCcc---CCc-eeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence 998664332 12211 111 23566666666899999999999987653
No 308
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.91 E-value=4.8e-09 Score=57.54 Aligned_cols=38 Identities=37% Similarity=0.597 Sum_probs=35.7
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEee
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYS 51 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~ 51 (321)
++.+.+++|...|++++|+|++++|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46788999999999999999999999999999999996
No 309
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=6e-08 Score=79.40 Aligned_cols=229 Identities=20% Similarity=0.237 Sum_probs=155.7
Q ss_pred CCccccccCCcce-----eeeeccCCcccEEEEEECCCCCEEEEecC-CceEEEeeccccCCCCCCCCCccccccccccc
Q 020798 2 SSDQSLESFRPYT-----LTQTLNGHLRAISSVKFSHDGRLLASSSA-DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQG 75 (321)
Q Consensus 2 ~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~s~~g~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 75 (321)
|-++..+.++|-. +.+.+..|...|.+++.+-+|..+.+... |..++++|+....... ...+.-++ +.
T Consensus 27 SlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~Dmin---miKL~~lP---g~ 100 (558)
T KOG0882|consen 27 SLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMIN---MIKLVDLP---GF 100 (558)
T ss_pred ecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhh---hcccccCC---Cc
Confidence 4456667777644 44556788999999999999999999777 9999999987654211 11111111 11
Q ss_pred EEEEEECCCC--CEEE-EEeCCCcEEEEecCCcce--eeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC----
Q 020798 76 VSDLVFSSDS--RFLV-SASDDKTIRLWDVPTATC--LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT---- 146 (321)
Q Consensus 76 i~~~~~~~~~--~~l~-~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~---- 146 (321)
.++..++.. ..++ +.-.++.+.++|-....+ ...-.-|..+|.++.++|.+..+++....|.|..|....
T Consensus 101 -a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qf 179 (558)
T KOG0882|consen 101 -AEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQF 179 (558)
T ss_pred -eEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccC
Confidence 122222221 1233 334678899998654432 233356899999999999999999999999999998652
Q ss_pred --CEEE---------EEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc------------------
Q 020798 147 --GKCL---------KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID------------------ 197 (321)
Q Consensus 147 --~~~~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~------------------ 197 (321)
.+.. ..++.......++.|+|++..+.+-+.|..|++++.++++.++.+-.
T Consensus 180 Pr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~V 259 (558)
T KOG0882|consen 180 PRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHV 259 (558)
T ss_pred ccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhcccccccccee
Confidence 1111 11222345678999999999999999999999999988765443210
Q ss_pred -------------CCC-CCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 198 -------------DEN-PPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 198 -------------~~~-~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
.++ .....+.|+..|++|+.++.-| |++.++.++..++.+
T Consensus 260 elgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 260 ELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRIL 313 (558)
T ss_pred ehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence 000 1233577888999999887766 899999888777665
No 310
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.90 E-value=3.7e-06 Score=72.22 Aligned_cols=239 Identities=8% Similarity=-0.010 Sum_probs=132.5
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCccc-ccccc-cccEE-EEEECCCCCEEEEEeCCCcEEEEecCCcceeee
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQ-KFTGH-EQGVS-DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKT 110 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~-~~~~h-~~~i~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 110 (321)
.+..+.+++.++.+..+|..+.+........... .+... ...+. .+.. .+..++.++.++.+..+|.++++.+..
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~ 145 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQ 145 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCccc
Confidence 3567777777888888876543221111100000 00000 00000 1111 345677788899999999999887655
Q ss_pred eecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCee-EEEEcc--CCCEEEEEeCCCeEEEEeCC
Q 020798 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT-AVDFNR--DGTMIVTSSYDGLCRIWDAS 187 (321)
Q Consensus 111 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~-~~~~~~--~~~~l~~~~~dg~i~~~d~~ 187 (321)
............+ .+..++.+..++.+..+|.++|+.+-..+....... ...-+| .+..++.++.+|.+..+|..
T Consensus 146 ~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~ 223 (394)
T PRK11138 146 TKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLME 223 (394)
T ss_pred ccCCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEcc
Confidence 4332221111111 245677778889999999999987765543211000 000011 12356677888999999988
Q ss_pred CCceeeeeccCCCC---C---eEEEEEcc--CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeE
Q 020798 188 TGHCMKTLIDDENP---P---VSFVKFSP--NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259 (321)
Q Consensus 188 ~~~~~~~~~~~~~~---~---~~~~~~~~--~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (321)
+++..-........ . ...+..+| .+..+++++.++.+..+|..+++.+-...... ...+ . ..+..
T Consensus 224 ~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~--~~~~--~---~~~~~ 296 (394)
T PRK11138 224 QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS--VNDF--A---VDGGR 296 (394)
T ss_pred CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC--ccCc--E---EECCE
Confidence 88654332111000 0 00011122 24567777889999999999998765543211 1001 1 13456
Q ss_pred EEEeCCCCeEEEEEcccceEEEEe
Q 020798 260 IVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
++.++.+|.+..+|..+++.+.+.
T Consensus 297 vy~~~~~g~l~ald~~tG~~~W~~ 320 (394)
T PRK11138 297 IYLVDQNDRVYALDTRGGVELWSQ 320 (394)
T ss_pred EEEEcCCCeEEEEECCCCcEEEcc
Confidence 667788999999999998876543
No 311
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.88 E-value=7.7e-09 Score=56.69 Aligned_cols=39 Identities=36% Similarity=0.710 Sum_probs=35.2
Q ss_pred ceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 277 RKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 277 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
++++..+.+|.++|.+++|+|++.+|++|+. |+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~--D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSS--DGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEET--TSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCC--CCEEEEEC
Confidence 3567889999999999999999999999994 58999997
No 312
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.84 E-value=2.2e-06 Score=76.01 Aligned_cols=201 Identities=15% Similarity=0.231 Sum_probs=131.0
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccccccc-EEEEEECCCCCEEEEEeCCCc-----EEEEec
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQG-VSDLVFSSDSRFLVSASDDKT-----IRLWDV 102 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~~~~~~~~~~l~~~~~d~~-----i~iwd~ 102 (321)
-+|++.+..++.|+.+|.|.+++-. ...++.+..+..+ |..+.......+|++-+.|+. +++|++
T Consensus 29 sc~~s~~~~vvigt~~G~V~~Ln~s---------~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~l 99 (933)
T KOG2114|consen 29 SCCSSSTGSVVIGTADGRVVILNSS---------FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDL 99 (933)
T ss_pred eEEcCCCceEEEeeccccEEEeccc---------ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecc
Confidence 4567889999999999999887432 1223455666666 443433334467777766654 899998
Q ss_pred CCc------cee--eeeec-----CcccEEEEEECCCCCEEEEeeCCCcEEEEecC---C-CEEEEEEeCCCCCeeEEEE
Q 020798 103 PTA------TCL--KTLIG-----HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK---T-GKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 103 ~~~------~~~--~~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~---~-~~~~~~~~~~~~~v~~~~~ 165 (321)
+.. .+. ..+.. ...++.+++++.+-+.+++|-.+|.|..+.-. . +...........+|+.+++
T Consensus 100 ek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~ 179 (933)
T KOG2114|consen 100 EKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLAL 179 (933)
T ss_pred cccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEE
Confidence 543 222 12222 23457889999988889999999999988521 1 1112222334679999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
..++..++.+.....|.+|.+....+.......++.+..+..+++....+++++. .-+.+|+....++-..+.
T Consensus 180 ~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 180 RSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred ecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcceeeeec
Confidence 9888764444444568888887433334445566777888888876654655554 459999987666666665
No 313
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.84 E-value=8.4e-07 Score=77.93 Aligned_cols=186 Identities=15% Similarity=0.205 Sum_probs=125.4
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
..+++++++ +++|+-|+-+|.|++++..... .....|+.. ..+|.++++|+.||++.+-.+-+.+....+
T Consensus 40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~ 109 (846)
T KOG2066|consen 40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQY 109 (846)
T ss_pred hHHHHHHhh--cceeeeccccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeE
Confidence 446666665 5689999999999999875542 334445443 667999999999999999988777766665
Q ss_pred eCCCCCeeEEEEccC-----CCEEEEEeCCCeEEEEeCCC-CceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 154 PAHSDPVTAVDFNRD-----GTMIVTSSYDGLCRIWDAST-GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
.. ..++.+++++|+ .+.+++|+..| +.++.-+- +...........++|.++.| .|++++-+..+| +++|
T Consensus 110 df-~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W--~g~lIAWand~G-v~vy 184 (846)
T KOG2066|consen 110 DF-KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKW--RGNLIAWANDDG-VKVY 184 (846)
T ss_pred ec-CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEe--cCcEEEEecCCC-cEEE
Confidence 43 468999999998 45789999888 66664321 11111123445677888888 577888777776 9999
Q ss_pred eCCCCcEEEEEeccCCcee---EEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 228 NYSTGKILKTYTGHTNSKY---CISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
|+.+++.+..++....... ...-..+ .+...|+.| ..-+|+|..++.
T Consensus 185 d~~~~~~l~~i~~p~~~~R~e~fpphl~W-~~~~~LVIG-W~d~v~i~~I~~ 234 (846)
T KOG2066|consen 185 DTPTRQRLTNIPPPSQSVRPELFPPHLHW-QDEDRLVIG-WGDSVKICSIKK 234 (846)
T ss_pred eccccceeeccCCCCCCCCcccCCCceEe-cCCCeEEEe-cCCeEEEEEEec
Confidence 9999888777654332110 0111122 244556655 344688888873
No 314
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.83 E-value=9.1e-08 Score=74.85 Aligned_cols=202 Identities=16% Similarity=0.275 Sum_probs=127.0
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-E----EEEEeCCC------------CCeeEEEEccCC--CEEEEE
Q 020798 115 TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-C----LKVLPAHS------------DPVTAVDFNRDG--TMIVTS 175 (321)
Q Consensus 115 ~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~----~~~~~~~~------------~~v~~~~~~~~~--~~l~~~ 175 (321)
...|+++.|...|.++++|...|.|.+|.-.... + ...++.|. ..|..+.|..++ ..++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 3458889999999999999999999999754322 1 12244443 346778887654 368888
Q ss_pred eCCCeEEEEeCCCCc--ee--------------------e-------------------e-eccCCCCCeEEEEEccCCC
Q 020798 176 SYDGLCRIWDASTGH--CM--------------------K-------------------T-LIDDENPPVSFVKFSPNGK 213 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~--~~--------------------~-------------------~-~~~~~~~~~~~~~~~~~g~ 213 (321)
+.|.+|++|.+.... .+ + + ....|...+.++.++.|.+
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e 185 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE 185 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence 999999999864320 00 0 0 0122334466778888877
Q ss_pred EEEEEecCCeEEEEeCCCCc---EEEEEeccCCc---eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEE------E
Q 020798 214 FILVGTLDNTLRLWNYSTGK---ILKTYTGHTNS---KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV------Q 281 (321)
Q Consensus 214 ~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~------~ 281 (321)
.+++ ..|-.|.+|++.-.. .+..++.|... ....+.-|.+.....+.-.++.|.|++-|++...+. .
T Consensus 186 t~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klf 264 (460)
T COG5170 186 TLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLF 264 (460)
T ss_pred eeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhh
Confidence 7665 446789999875422 12222222211 001122344444556777788999999999853221 0
Q ss_pred --E--------ecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 282 --K--------LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 282 --~--------~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
. +.+-...|.++.|+|+|+++++-.. -+|+|||...
T Consensus 265 e~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy---ltvkiwDvnm 310 (460)
T COG5170 265 ELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY---LTVKIWDVNM 310 (460)
T ss_pred hhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc---ceEEEEeccc
Confidence 1 1122356788999999999998653 5899999853
No 315
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.83 E-value=2.1e-08 Score=79.33 Aligned_cols=149 Identities=18% Similarity=0.286 Sum_probs=109.4
Q ss_pred EEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-----EEEEEEeCCCCCeeEE
Q 020798 89 VSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-----KCLKVLPAHSDPVTAV 163 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-----~~~~~~~~~~~~v~~~ 163 (321)
++.+.+-.+-+-|++++.. ..+. .++.|.++.|...++.++.|...|.|..+|++.+ .+...+ -|...|+++
T Consensus 228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtsl 304 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSL 304 (425)
T ss_pred ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhh
Confidence 4455566677788877743 2222 5667888889888899999999999999999865 233333 478889888
Q ss_pred EEcc-CCCEEEEEeCCCeEEEEeCCCCce---eeeeccCCCC-CeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 164 DFNR-DGTMIVTSSYDGLCRIWDASTGHC---MKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 164 ~~~~-~~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
..-. ++.+|.+.+.+|.|++||.+.-++ +.....+.+. ...-+..++....+++++.|...+||.++.+.++.++
T Consensus 305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ti 384 (425)
T KOG2695|consen 305 QILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTI 384 (425)
T ss_pred hhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeecc
Confidence 7766 677899999999999999987665 4444332221 1122445667778888999999999999999988877
Q ss_pred ec
Q 020798 239 TG 240 (321)
Q Consensus 239 ~~ 240 (321)
+.
T Consensus 385 pf 386 (425)
T KOG2695|consen 385 PF 386 (425)
T ss_pred CC
Confidence 53
No 316
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.81 E-value=3.5e-09 Score=93.39 Aligned_cols=195 Identities=25% Similarity=0.422 Sum_probs=136.5
Q ss_pred eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC--eEEEE
Q 020798 107 CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG--LCRIW 184 (321)
Q Consensus 107 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~ 184 (321)
..+.+..|+...+|++|+-+.+.|+.|+..|.|+++++.+|.......+|..+++-+.-+.+|..+++.+.-. ...+|
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHh
Confidence 3455667888899999999999999999999999999999988888899999999999888998777655433 46789
Q ss_pred eCCC-CceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE-eccCCceeEEEeEEEecCCeEEEE
Q 020798 185 DAST-GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY-TGHTNSKYCISSTFSVTNGKYIVS 262 (321)
Q Consensus 185 d~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 262 (321)
+... +.....+. .-.++.|+..-+.-+.|+......+||++++.++.++ .+.....+.-....+.|...+++
T Consensus 1173 ~~~s~~~~~Hsf~-----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl- 1246 (1516)
T KOG1832|consen 1173 DASSTGGPRHSFD-----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL- 1246 (1516)
T ss_pred ccccccCcccccc-----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe-
Confidence 8864 22222221 1235677776555566777678999999998877663 32222222222222334455444
Q ss_pred eCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.||. +||++..+-++++..... -..-.|||.|+.++.-+ .|||+.
T Consensus 1247 --ndGv--LWDvR~~~aIh~FD~ft~-~~~G~FHP~g~eVIINS-------EIwD~R 1291 (1516)
T KOG1832|consen 1247 --NDGV--LWDVRIPEAIHRFDQFTD-YGGGGFHPSGNEVIINS-------EIWDMR 1291 (1516)
T ss_pred --eCce--eeeeccHHHHhhhhhhee-cccccccCCCceEEeec-------hhhhhH
Confidence 3453 799998877777765542 23457999999988754 267753
No 317
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.74 E-value=5.1e-07 Score=80.33 Aligned_cols=181 Identities=16% Similarity=0.241 Sum_probs=124.9
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
+..++-|+-...+..+|+.+.+..+...-..+.+.-+.. +++.+++|...|+|.+-|.++.+.+.++..|.+.+.++.
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD 224 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD 224 (1118)
T ss_pred CcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeee
Confidence 345666777777888898887765544333334555544 468899999999999999999999999999999887665
Q ss_pred EccCCCEEEEEeCC---------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccC-CCEEEEEecCCeEEEEeC---CC
Q 020798 165 FNRDGTMIVTSSYD---------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNY---ST 231 (321)
Q Consensus 165 ~~~~~~~l~~~~~d---------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~---~~ 231 (321)
-.|+.|++|+.. ..++|||++.-+.+..+.... ....+.|+|. ...+++++..|+..+.|. .+
T Consensus 225 --v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~--~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsN 300 (1118)
T KOG1275|consen 225 --VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY--GPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSN 300 (1118)
T ss_pred --ccCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc--CchhhhhcccccceEEEEecccceeeccccccCC
Confidence 468899998754 457999998755443332222 2345778885 345777888999999983 32
Q ss_pred CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEE
Q 020798 232 GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd 273 (321)
.. ...+..+.....+..+.+ .++++.+|.|..+|.|.+|.
T Consensus 301 P~-~~~~~v~p~~s~i~~fDi-Ssn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 301 PP-AGVKMVNPNGSGISAFDI-SSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred Cc-cceeEEccCCCcceeEEe-cCCCceEEEecccCcEeeec
Confidence 21 222222222222333333 36899999999999999997
No 318
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.66 E-value=2.8e-06 Score=68.96 Aligned_cols=244 Identities=14% Similarity=0.155 Sum_probs=134.2
Q ss_pred eeccCCcccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCC
Q 020798 17 QTLNGHLRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDD 94 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d 94 (321)
+.+.+|...|..++|||..+ ++..++.+..|++.|+.... ....+..| ..+.+++|.-+. +++++|-..
T Consensus 187 q~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~--------~vssy~a~-~~~wSC~wDlde~h~IYaGl~n 257 (463)
T KOG1645|consen 187 QILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC--------VVSSYIAY-NQIWSCCWDLDERHVIYAGLQN 257 (463)
T ss_pred hcccccchhhhhhccCccccceeeeeccCceEEEEecccce--------eeeheecc-CCceeeeeccCCcceeEEeccC
Confidence 35678889999999999888 78889999999999986532 23344455 678899998765 577888899
Q ss_pred CcEEEEecCCcceee-eeec--CcccEEEEEE------CCCCCEEEEeeCCCcEEEEecCCC--EEEEEEe-CCCCCeeE
Q 020798 95 KTIRLWDVPTATCLK-TLIG--HTNYVFCVNF------NPQSNMIVSGAFDETVRIWDVKTG--KCLKVLP-AHSDPVTA 162 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~-~~~~--~~~~v~~~~~------~~~~~~l~~~~~dg~i~~wd~~~~--~~~~~~~-~~~~~v~~ 162 (321)
|.|.+||++..+... .+.+ ...+|..++. .+.+.+++.+..+ +..|++.-. ......+ ...+.+.+
T Consensus 258 G~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cis 335 (463)
T KOG1645|consen 258 GMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICIS 335 (463)
T ss_pred ceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceee
Confidence 999999997654211 1111 1223333332 2334555544433 345654321 1111111 22455666
Q ss_pred EEEccCCCEEEEEe-CCC---eEE----EEeCCCCceeeeeccCC-CC---C---eEEEEEccCCCEEEE-EecCCeEEE
Q 020798 163 VDFNRDGTMIVTSS-YDG---LCR----IWDASTGHCMKTLIDDE-NP---P---VSFVKFSPNGKFILV-GTLDNTLRL 226 (321)
Q Consensus 163 ~~~~~~~~~l~~~~-~dg---~i~----~~d~~~~~~~~~~~~~~-~~---~---~~~~~~~~~g~~l~~-~~~d~~i~i 226 (321)
+.+++..+.++... .+. .++ --|...+..+....... +. . -..+.-.++.++++. +...+.+.+
T Consensus 336 mqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil 415 (463)
T KOG1645|consen 336 MQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELIL 415 (463)
T ss_pred eeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEE
Confidence 77766555444332 211 000 01222222221111000 00 0 011222344455554 445678999
Q ss_pred EeCCCCcEEEEEeccCCceeEEEeEEEecCC-eEEEEeCCCCeEEEEEcc
Q 020798 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNG-KYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 227 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~ 275 (321)
||..+.+.+..+.-. .+. ...+....++ .+|++- .|..++||..+
T Consensus 416 ~D~~s~evvQ~l~~~-epv--~Dicp~~~n~~syLa~L-Td~~v~Iyk~e 461 (463)
T KOG1645|consen 416 QDPHSFEVVQTLALS-EPV--LDICPNDTNGSSYLALL-TDDRVHIYKNE 461 (463)
T ss_pred eccchhheeeecccC-cce--eecceeecCCcchhhhe-ecceEEEEecC
Confidence 999999998888654 222 2333333333 455544 45678887654
No 319
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.64 E-value=1.4e-05 Score=71.16 Aligned_cols=205 Identities=18% Similarity=0.318 Sum_probs=126.0
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCccc-EEEEEECCCCCEEEEeeCCC-----cEEEEecCCC------
Q 020798 80 VFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNY-VFCVNFNPQSNMIVSGAFDE-----TVRIWDVKTG------ 147 (321)
Q Consensus 80 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~------ 147 (321)
+|++.+..++.|+.+|.|.+.+- ..+....++++... +..+-...+.++|++.+.|+ .+++|++..-
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 46778888999999999988873 23333556666655 44343333346777766654 4899998532
Q ss_pred EEE---EEE----eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCC---CCceeeeeccCCCCCeEEEEEccCCCEEEE
Q 020798 148 KCL---KVL----PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS---TGHCMKTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 148 ~~~---~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
.++ ..+ +....++.+++.+.+-..+++|-.+|.|..+.-. ..............+|+.+++..+++.++-
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lF 188 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLF 188 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEE
Confidence 233 111 1235678899999888888889899999888532 111122333445678999999998887333
Q ss_pred EecCCeEEEEeCCCCcE-EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec-CCCCC
Q 020798 218 GTLDNTLRLWNYSTGKI-LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE-GHTDP 289 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~h~~~ 289 (321)
......|.+|.+....+ ...+..+..+..|. .+....++ +++++ +..|.+|+....+.-..+. +|...
T Consensus 189 v~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCs--s~~~~t~q-fIca~-~e~l~fY~sd~~~~cfaf~~g~kk~ 258 (933)
T KOG2114|consen 189 VATTEQVMLYSLSGRTPSLKVLDNNGISLNCS--SFSDGTYQ-FICAG-SEFLYFYDSDGRGPCFAFEVGEKKE 258 (933)
T ss_pred EEecceeEEEEecCCCcceeeeccCCccceee--ecCCCCcc-EEEec-CceEEEEcCCCcceeeeecCCCeEE
Confidence 33345799999874442 33344443333332 23333333 44443 3469999987666666666 66543
No 320
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.63 E-value=9.1e-05 Score=62.90 Aligned_cols=240 Identities=13% Similarity=0.193 Sum_probs=133.2
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCccee-------------------------------------------eee
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL-------------------------------------------KTL 111 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-------------------------------------------~~~ 111 (321)
.|..+.|+++...|++|...|.|.+|....++.. .-+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 4788999999888999999999999865322100 001
Q ss_pred ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe--C------CCCCeeEEEEcc-----CC---CEEEEE
Q 020798 112 IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP--A------HSDPVTAVDFNR-----DG---TMIVTS 175 (321)
Q Consensus 112 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~--~------~~~~v~~~~~~~-----~~---~~l~~~ 175 (321)
....+.|++++.+ +=.+++.|..+|.+.+.|++....+..-. . ....++++.|.. |+ -.+++|
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 2235678888886 45689999999999999999887665421 1 234577888762 22 367889
Q ss_pred eCCCeEEEEeCC--C-Cceeee---eccCCCCCeEE-EEEccC-C-------------------CEEEEEecCCeEEEEe
Q 020798 176 SYDGLCRIWDAS--T-GHCMKT---LIDDENPPVSF-VKFSPN-G-------------------KFILVGTLDNTLRLWN 228 (321)
Q Consensus 176 ~~dg~i~~~d~~--~-~~~~~~---~~~~~~~~~~~-~~~~~~-g-------------------~~l~~~~~d~~i~i~d 228 (321)
+..|.+.+|.+. . +..... .......++.. ..++.+ | +-+++...+..++++.
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~ 241 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK 241 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence 999999999763 1 111111 11112222222 223211 1 1244455577899999
Q ss_pred CCCCcEEEEEeccCCceeEEEeEEE----ecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC----CCeEEEEecCCCc
Q 020798 229 YSTGKILKTYTGHTNSKYCISSTFS----VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT----DPVISVASHPTEN 300 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~p~~~ 300 (321)
..+.+...... .....+....+. ...+..|++-..+|.|++|.+..-+.+..+.-+. ..+...+++++|.
T Consensus 242 ~~~~k~~~K~~--~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gd 319 (395)
T PF08596_consen 242 PPKSKGAHKSF--DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGD 319 (395)
T ss_dssp TT---EEEEE---SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-
T ss_pred CCCCcccceee--ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCC
Confidence 98877665543 222333333332 2346678888999999999999888877665532 2355677788888
Q ss_pred eEEEEeecCCccEEEcc
Q 020798 301 IIASGALDNDRTVKIWT 317 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~ 317 (321)
.+.-.|..+-..+.+|.
T Consensus 320 i~~~~gpsE~~l~sv~~ 336 (395)
T PF08596_consen 320 IFYWTGPSEIQLFSVWG 336 (395)
T ss_dssp EEEE-SSSEEEEEEEES
T ss_pred EEEEeCcccEEEEEEEc
Confidence 87766533323344443
No 321
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.63 E-value=4.1e-05 Score=70.74 Aligned_cols=198 Identities=13% Similarity=0.215 Sum_probs=125.6
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec-
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV- 102 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~- 102 (321)
..|.++.|--+.+.+..+...|.+.+-+.... .+.....-..+|.+++|+||++.++..+..+++.+-+-
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~---------~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~ 139 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETL---------ELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKD 139 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEccccc---------ceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEecc
Confidence 57888999889988888888999988754431 12222334688999999999999988888777765321
Q ss_pred ---CC-----------c--------ceeeeeecC---------------------cccEEEEEECCCCCEEEEe-----e
Q 020798 103 ---PT-----------A--------TCLKTLIGH---------------------TNYVFCVNFNPQSNMIVSG-----A 134 (321)
Q Consensus 103 ---~~-----------~--------~~~~~~~~~---------------------~~~v~~~~~~~~~~~l~~~-----~ 134 (321)
-. . +....+.+. .+.=..+.|-.||.++++. .
T Consensus 140 f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~ 219 (1265)
T KOG1920|consen 140 FEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESET 219 (1265)
T ss_pred ccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccC
Confidence 00 0 000011110 0111348899999998873 2
Q ss_pred CCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe---CCCeEEEEeCCC---CceeeeeccCCCCCeEEEEE
Q 020798 135 FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS---YDGLCRIWDAST---GHCMKTLIDDENPPVSFVKF 208 (321)
Q Consensus 135 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~ 208 (321)
....|++||-+ +.+...-......-.+++|-|.|..+++-. .++.|.+|.-+. +....... .....+..++|
T Consensus 220 ~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p-~de~~ve~L~W 297 (1265)
T KOG1920|consen 220 GTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFP-LDEKEVEELAW 297 (1265)
T ss_pred CceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCc-ccccchheeee
Confidence 23789999965 443322222223346799999999888753 456788886432 11111111 11223788999
Q ss_pred ccCCCEEEE---EecCCeEEEEeCCCC
Q 020798 209 SPNGKFILV---GTLDNTLRLWNYSTG 232 (321)
Q Consensus 209 ~~~g~~l~~---~~~d~~i~i~d~~~~ 232 (321)
+.++..|++ ......|++|-+.+-
T Consensus 298 ns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 298 NSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred cCCCCceeeeecccccceEEEEEecCe
Confidence 999999887 344456999987653
No 322
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.61 E-value=3.4e-05 Score=71.29 Aligned_cols=234 Identities=15% Similarity=0.196 Sum_probs=132.7
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
..|.++.|..+...++.+..+|.|.+-|..+... .....-...|.+++|+||...++..+..+++.+-+ .+-.++...
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~i~E~ 146 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEPIAEK 146 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccchhcc
Confidence 5799999999999999999999999998877643 22333456799999999999998888777776543 222222221
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCcee-------eeecc--CCCCCeEEEEEccCCCEEEEEe----c
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM-------KTLID--DENPPVSFVKFSPNGKFILVGT----L 220 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-------~~~~~--~~~~~~~~~~~~~~g~~l~~~~----~ 220 (321)
+.+. .-.+.+ .++.+++...=.-+....++.. ..... .....-..+.|--||+++++.. .
T Consensus 147 ~L~~------d~~~~s-k~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~ 219 (1265)
T KOG1920|consen 147 PLDA------DDERKS-KFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESET 219 (1265)
T ss_pred cccc------cccccc-ccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccC
Confidence 1111 111111 2233333221111111111100 00000 0111224588999999998843 2
Q ss_pred C-CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEe---CCCCeEEEEEcccc---eEEEEecCCCCCeEEE
Q 020798 221 D-NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG---SEDSCVYLWELQSR---KVVQKLEGHTDPVISV 293 (321)
Q Consensus 221 d-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~ 293 (321)
+ ..|+|||.. +.+-..-....+...+ ..+.|.|..+++- ++|+.|.+|+-+.- ...-.......++..+
T Consensus 220 ~~RkirV~drE-g~Lns~se~~~~l~~~---LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L 295 (1265)
T KOG1920|consen 220 GTRKIRVYDRE-GALNSTSEPVEGLQHS---LSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEEL 295 (1265)
T ss_pred CceeEEEeccc-chhhcccCcccccccc---eeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchhee
Confidence 3 789999965 4322211111111112 2334678777764 45667999985321 1111222233458999
Q ss_pred EecCCCceEEEEeec-CCccEEEccccc
Q 020798 294 ASHPTENIIASGALD-NDRTVKIWTQEK 320 (321)
Q Consensus 294 ~~~p~~~~l~s~~~d-~~~~i~iw~~~~ 320 (321)
+|+.++..||.--.. ....|++|...+
T Consensus 296 ~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 296 AWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred eecCCCCceeeeecccccceEEEEEecC
Confidence 999999999983222 334599998753
No 323
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.55 E-value=5.2e-05 Score=64.08 Aligned_cols=264 Identities=20% Similarity=0.251 Sum_probs=131.7
Q ss_pred CCCCCEEEEecC---------CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 32 SHDGRLLASSSA---------DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 32 s~~g~~l~~~~~---------d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
|||+++++...+ .+.+.+||+.... ...+......+....|+|+|+.++... ++.|.+++.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~---------~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~ 70 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGE---------ITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDL 70 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTE---------EEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESS
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCc---------eEECcCCccccccceeecCCCeeEEEe-cCceEEEEC
Confidence 688888776432 3456667665421 112222245678899999999988765 578999988
Q ss_pred CCcceeee-eec-------Cc---------ccEEEEEECCCCCEEEEeeCC-CcEEEE----------------------
Q 020798 103 PTATCLKT-LIG-------HT---------NYVFCVNFNPQSNMIVSGAFD-ETVRIW---------------------- 142 (321)
Q Consensus 103 ~~~~~~~~-~~~-------~~---------~~v~~~~~~~~~~~l~~~~~d-g~i~~w---------------------- 142 (321)
.++..... ..+ -. +.-..+-|+||+++|+....| ..++.+
T Consensus 71 ~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk 150 (353)
T PF00930_consen 71 ATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPK 150 (353)
T ss_dssp TTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--B
T ss_pred CCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCC
Confidence 76643221 111 00 112457799999988765432 223222
Q ss_pred -------------ecCCCEEEE-EE----eCCCCCeeEEEEccCCCEEEEE--eCCC---eEEEEeCCCCceeeeeccCC
Q 020798 143 -------------DVKTGKCLK-VL----PAHSDPVTAVDFNRDGTMIVTS--SYDG---LCRIWDASTGHCMKTLIDDE 199 (321)
Q Consensus 143 -------------d~~~~~~~~-~~----~~~~~~v~~~~~~~~~~~l~~~--~~dg---~i~~~d~~~~~~~~~~~~~~ 199 (321)
|+.+++... .. ......+..+.|.+++..++.. ..+. .+.++|..++.+........
T Consensus 151 ~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~ 230 (353)
T PF00930_consen 151 AGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETS 230 (353)
T ss_dssp TTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEES
T ss_pred CCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecC
Confidence 222221100 00 0112235678888888733332 3322 45666776654432221111
Q ss_pred CC---CeEEEEEc-cCCC-EEEEEecCC--eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC----Ce
Q 020798 200 NP---PVSFVKFS-PNGK-FILVGTLDN--TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED----SC 268 (321)
Q Consensus 200 ~~---~~~~~~~~-~~g~-~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~ 268 (321)
.. ......+. +++. ++.....+| .|.+++...+. ...+....-.+..+ ..+...++....++..+ ..
T Consensus 231 ~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i-~~~d~~~~~iyf~a~~~~p~~r~ 308 (353)
T PF00930_consen 231 DGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSI-LGWDEDNNRIYFTANGDNPGERH 308 (353)
T ss_dssp SSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEE-EEEECTSSEEEEEESSGGTTSBE
T ss_pred CcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeeccc-ceEcCCCCEEEEEecCCCCCceE
Confidence 11 11234443 5554 444555666 45666665554 33333222222121 22333345555566653 35
Q ss_pred EEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEee
Q 020798 269 VYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307 (321)
Q Consensus 269 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~ 307 (321)
|..-++..+..+..+......-..+.|+|++++++-...
T Consensus 309 lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 309 LYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYS 347 (353)
T ss_dssp EEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEE
T ss_pred EEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEc
Confidence 666666623444555543333369999999999887654
No 324
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.52 E-value=0.00019 Score=62.77 Aligned_cols=138 Identities=10% Similarity=0.076 Sum_probs=95.0
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
|...|.--+++-.+++++.|+.-|.+.+|....... .+....+-.+.+..+..+++..++|+|+..|.|.++-
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~-------~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~q 104 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEM-------RKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQ 104 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhh-------hcccccCccceEEEEEecchhHhhhhhcCCceEEeeh
Confidence 344555556677899999999999999996543221 1122222445667788899999999999999999997
Q ss_pred cCCccee-----ee-eecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE----EEEEEeCCCCCeeEEEEc
Q 020798 102 VPTATCL-----KT-LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK----CLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 102 ~~~~~~~-----~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~v~~~~~~ 166 (321)
+...... .. -..|...|++++|++++..+++|...|+|..-.+.... ..+.+-.....|-.+++.
T Consensus 105 l~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~ 179 (726)
T KOG3621|consen 105 LNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL 179 (726)
T ss_pred hhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence 7553211 11 13478899999999999999999999999888776511 112222334566666654
No 325
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.50 E-value=3.4e-06 Score=72.02 Aligned_cols=114 Identities=20% Similarity=0.288 Sum_probs=79.3
Q ss_pred EEEEEECCC-CCEEEEE----eCCCc----EEEEecCCcceee---eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEe
Q 020798 76 VSDLVFSSD-SRFLVSA----SDDKT----IRLWDVPTATCLK---TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143 (321)
Q Consensus 76 i~~~~~~~~-~~~l~~~----~~d~~----i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 143 (321)
..++.|+.. .+.+.+. +.+|. -.+|++..++... .-......+.+++++|+...++.|+.||.|.+||
T Consensus 208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD 287 (545)
T PF11768_consen 208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYD 287 (545)
T ss_pred cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEE
Confidence 345566653 3334332 33443 3456655443211 1234667899999999999999999999999999
Q ss_pred cCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce
Q 020798 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 191 (321)
...+... .....-..+.++|+|+|..+++|+..|.+.+||..-...
T Consensus 288 ~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi 333 (545)
T PF11768_consen 288 TTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPI 333 (545)
T ss_pred cCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCcc
Confidence 8766432 223345568899999999999999999999999865443
No 326
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.49 E-value=1e-05 Score=71.34 Aligned_cols=180 Identities=17% Similarity=0.232 Sum_probs=120.4
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee
Q 020798 116 NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195 (321)
Q Consensus 116 ~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 195 (321)
..+.|++++ +.+|+-|..+|.+++++.... . .....|... .-+|.++++|+.||.+.+..+-+.+.....
T Consensus 40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~ 109 (846)
T KOG2066|consen 40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQY 109 (846)
T ss_pred hHHHHHHhh--cceeeeccccceEEEEecCCc-c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeE
Confidence 445666665 578999999999999986533 3 333344433 557999999999999999887766554433
Q ss_pred ccCCCCCeEEEEEccC-----CCEEEEEecCCeEEEEeCC---CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC
Q 020798 196 IDDENPPVSFVKFSPN-----GKFILVGTLDNTLRLWNYS---TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267 (321)
Q Consensus 196 ~~~~~~~~~~~~~~~~-----g~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 267 (321)
....++..++++|+ .+.+++|+..| +.++.-+ ....+ ......+++.++.+ .|.++|-++.+|
T Consensus 110 --df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W-----~g~lIAWand~G 180 (846)
T KOG2066|consen 110 --DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKW-----RGNLIAWANDDG 180 (846)
T ss_pred --ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEe-----cCcEEEEecCCC
Confidence 23557889999997 46688888888 7776522 11112 23333455554432 488898888777
Q ss_pred eEEEEEcccceEEEEecCCCCCe------EEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 268 CVYLWELQSRKVVQKLEGHTDPV------ISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 268 ~i~vwd~~~~~~~~~~~~h~~~v------~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
|+|||..+++.+..++-....+ ..+.|.++ ..|+-|..| +|+|...+
T Consensus 181 -v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~-~~LVIGW~d---~v~i~~I~ 233 (846)
T KOG2066|consen 181 -VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDE-DRLVIGWGD---SVKICSIK 233 (846)
T ss_pred -cEEEeccccceeeccCCCCCCCCcccCCCceEecCC-CeEEEecCC---eEEEEEEe
Confidence 8999999988877765543433 35677654 556666543 57776654
No 327
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.43 E-value=0.00018 Score=61.14 Aligned_cols=215 Identities=15% Similarity=0.230 Sum_probs=120.1
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCC---CCCC--------------------------------Cccccc
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSD---STPP--------------------------------SPLQKF 69 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~---~~~~--------------------------------~~~~~~ 69 (321)
.|+.+.|+++...|++|...|.|.+|......... ..+. .|...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 58899999999999999999999998765432221 0000 011112
Q ss_pred ccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeee--ec------CcccEEEEEEC-----CCC---CEEEEe
Q 020798 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL--IG------HTNYVFCVNFN-----PQS---NMIVSG 133 (321)
Q Consensus 70 ~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~------~~~~v~~~~~~-----~~~---~~l~~~ 133 (321)
....+.|++++.|.-| +++.|..+|.+.|.|++....+..- .. ....+.++.|. .|+ -.+++|
T Consensus 83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 2345789999998554 8999999999999999887765431 11 23456677664 233 357888
Q ss_pred eCCCcEEEEecCC---CEE----EEEEeCCCCCeeEEE-EccC-----------------C---CEEEEEeCCCeEEEEe
Q 020798 134 AFDETVRIWDVKT---GKC----LKVLPAHSDPVTAVD-FNRD-----------------G---TMIVTSSYDGLCRIWD 185 (321)
Q Consensus 134 ~~dg~i~~wd~~~---~~~----~~~~~~~~~~v~~~~-~~~~-----------------~---~~l~~~~~dg~i~~~d 185 (321)
...|.+.+|.+.. +.- ......+.+++..+. ++.+ + ..++....+..++++.
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~ 241 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK 241 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence 9999999997642 111 111123455555444 2111 1 1244445567799999
Q ss_pred CCCCceeeeeccCCCCCeEEEEE-----ccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 186 ASTGHCMKTLIDDENPPVSFVKF-----SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
..+.+...+.. ........+.+ ...+..|++-..+|.+++|.+..-+.+......
T Consensus 242 ~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~ 301 (395)
T PF08596_consen 242 PPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLP 301 (395)
T ss_dssp TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-S
T ss_pred CCCCcccceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCC
Confidence 88777665554 22122223333 235667788889999999999998888777653
No 328
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.42 E-value=0.00084 Score=57.32 Aligned_cols=218 Identities=17% Similarity=0.230 Sum_probs=144.2
Q ss_pred EEEEEECCCCCEE-EEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC---CCcEEEEecCCCEEEE
Q 020798 76 VSDLVFSSDSRFL-VSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF---DETVRIWDVKTGKCLK 151 (321)
Q Consensus 76 i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~wd~~~~~~~~ 151 (321)
-..++.++.++.+ +....++.|.+.|..+.+....... ......++++|+++.+..+.. ++.+.+.|..+.+...
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~ 154 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTA 154 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEE
Confidence 4567888888744 4555568999999877776554432 225568899999987766554 6889999988888877
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEe-CCCeEEEEeCCCCceee-ee--ccCCCCCeEEEEEccCCCEEEEEecC---CeE
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSS-YDGLCRIWDASTGHCMK-TL--IDDENPPVSFVKFSPNGKFILVGTLD---NTL 224 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~-~~--~~~~~~~~~~~~~~~~g~~l~~~~~d---~~i 224 (321)
..+....+ ..+++.|++..++.+. .++.+.+.|........ .. ..........+.++|+|+.+.+.... +.+
T Consensus 155 ~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v 233 (381)
T COG3391 155 TIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNV 233 (381)
T ss_pred EEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceE
Confidence 76654455 8899999999666555 78899999977654442 10 01122334568899999977665543 589
Q ss_pred EEEeCCCCcEEEE-EeccCCceeEEEeEEEecCCeEEEEe-CCCCeEEEEEcccceEEEEecCCC---CCeEEEEecCC
Q 020798 225 RLWNYSTGKILKT-YTGHTNSKYCISSTFSVTNGKYIVSG-SEDSCVYLWELQSRKVVQKLEGHT---DPVISVASHPT 298 (321)
Q Consensus 225 ~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~---~~v~~~~~~p~ 298 (321)
...|..++..... +....... . .....++|..+... +..+.+.+.|..+........... ..+..+++.+.
T Consensus 234 ~~id~~~~~v~~~~~~~~~~~~--~-~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
T COG3391 234 LKIDTATGNVTATDLPVGSGAP--R-GVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPL 309 (381)
T ss_pred EEEeCCCceEEEeccccccCCC--C-ceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccceee
Confidence 9999888776665 22221111 1 12234678777766 445889999988877766544332 23455555544
No 329
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.41 E-value=1.1e-07 Score=81.36 Aligned_cols=200 Identities=16% Similarity=0.273 Sum_probs=124.0
Q ss_pred cccEEEEEECCCCC--EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC-CCCEEEEEe----CCC
Q 020798 23 LRAISSVKFSHDGR--LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS-DSRFLVSAS----DDK 95 (321)
Q Consensus 23 ~~~v~~~~~s~~g~--~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~l~~~~----~d~ 95 (321)
...+.|++++.+.+ +++.|..+|.|.+-.+...... .-...++|....++++|++ |.+.||+|- .|.
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS------s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds 129 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS------SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDS 129 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccc------cceecccccccccccccccccHHHHHhhhhhhcccC
Confidence 34677888776544 7899999999988765432211 1223356778899999998 456777663 456
Q ss_pred cEEEEecCCc--ceee--eeec-CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc-CC
Q 020798 96 TIRLWDVPTA--TCLK--TLIG-HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-DG 169 (321)
Q Consensus 96 ~i~iwd~~~~--~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~ 169 (321)
.+.|||+.+. .+.. .+.+ ......+++|-.+.+.+++|.....++++|++... ..........+..+...| .+
T Consensus 130 ~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~-~~~~svnTk~vqG~tVdp~~~ 208 (783)
T KOG1008|consen 130 SLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSL-DSVSSVNTKYVQGITVDPFSP 208 (783)
T ss_pred CccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhh-hhhhhhhhhhcccceecCCCC
Confidence 7999999776 2111 1222 33345578888777888899888899999987321 111111233455567777 55
Q ss_pred CEEEEEeCCCeEEEEe-CCCCcee-eeeccCC---CCCeEEEEEccCC--CEEEEEecCCeEEEEeCC
Q 020798 170 TMIVTSSYDGLCRIWD-ASTGHCM-KTLIDDE---NPPVSFVKFSPNG--KFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d-~~~~~~~-~~~~~~~---~~~~~~~~~~~~g--~~l~~~~~d~~i~i~d~~ 230 (321)
+++++ ..||.+.+|| .++-+.. ..+.... ...+..++|+|.. ...+..-..++|++||+.
T Consensus 209 nY~cs-~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 209 NYFCS-NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred Cceec-cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 56554 4599999999 4433222 2221111 1236788999953 333333445789999975
No 330
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.40 E-value=3.3e-06 Score=74.90 Aligned_cols=108 Identities=15% Similarity=0.283 Sum_probs=85.1
Q ss_pred EEEECCCCCEEEEEe----CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 78 DLVFSSDSRFLVSAS----DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 78 ~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
-..|+|...+++.++ ..|+|.||- +++++..... ..-.+.+++|+|..-.|+.+-.-|.+.+|...+.+.....
T Consensus 20 i~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~ 97 (1416)
T KOG3617|consen 20 ISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVV 97 (1416)
T ss_pred ccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeec
Confidence 357999999888775 457888883 4555433221 1223557999998888899989999999998877766666
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCC
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~ 187 (321)
..|..++..+.|+++|+.+.++..-|.+.+|...
T Consensus 98 ~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 98 ETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred cCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 7899999999999999999999999999999765
No 331
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.40 E-value=0.00056 Score=54.09 Aligned_cols=201 Identities=16% Similarity=0.301 Sum_probs=110.0
Q ss_pred eeeccCCcccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccc-cccEEEEEECCCCCEEEEEeC
Q 020798 16 TQTLNGHLRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGH-EQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~~~~~~~l~~~~~ 93 (321)
.+.+.+-...++.++|+|+.+ ++++....+.|..+++.. ..++.+.-. .+..-.|++..++.++++.-.
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G---------~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er 84 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDG---------KVLRRIPLDGFGDYEGITYLGNGRYVLSEER 84 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT-----------EEEEEE-SS-SSEEEEEE-STTEEEEEETT
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCCC---------CEEEEEeCCCCCCceeEEEECCCEEEEEEcC
Confidence 356778788899999999755 667777778877776532 122222211 345778899888887777666
Q ss_pred CCcEEEEecCCcce------eeee-----ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC---CEEEEEE------
Q 020798 94 DKTIRLWDVPTATC------LKTL-----IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT---GKCLKVL------ 153 (321)
Q Consensus 94 d~~i~iwd~~~~~~------~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~---~~~~~~~------ 153 (321)
++.+.++++..... ...+ ..++..+-.++|+|.++.|+.+-...-..+|.++. .......
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~ 164 (248)
T PF06977_consen 85 DQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLD 164 (248)
T ss_dssp TTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH
T ss_pred CCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccc
Confidence 88999988843210 1111 12445588999999988887777666666666543 1111111
Q ss_pred --eCCCCCeeEEEEccCC-CEEEEEeCCCeEEEEeCCCCceeeeeccC--------CCCCeEEEEEccCCCEEEEEecCC
Q 020798 154 --PAHSDPVTAVDFNRDG-TMIVTSSYDGLCRIWDASTGHCMKTLIDD--------ENPPVSFVKFSPNGKFILVGTLDN 222 (321)
Q Consensus 154 --~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~~~~~d~ 222 (321)
......+.+++++|.. ++++.......+..+| ..++....+.-. .-+....+++.++|++.++ +.-+
T Consensus 165 ~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv-sEpN 242 (248)
T PF06977_consen 165 DDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV-SEPN 242 (248)
T ss_dssp -HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE-ETTT
T ss_pred cccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE-cCCc
Confidence 1123456889999865 4666677788888888 445544333211 1234678999999976554 4555
Q ss_pred eEEEE
Q 020798 223 TLRLW 227 (321)
Q Consensus 223 ~i~i~ 227 (321)
...+|
T Consensus 243 lfy~f 247 (248)
T PF06977_consen 243 LFYRF 247 (248)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 55444
No 332
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.38 E-value=0.00076 Score=55.03 Aligned_cols=249 Identities=15% Similarity=0.210 Sum_probs=135.2
Q ss_pred EEECCCCCEEEEecC----------CceEEEeeccccCCCC--CCCCCcccccccccccEEEEEECCCCCEEEEE--eCC
Q 020798 29 VKFSHDGRLLASSSA----------DKTLLTYSLSSISNSD--STPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA--SDD 94 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~----------d~~v~~~~~~~~~~~~--~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~--~~d 94 (321)
+..+|+++.+++++. .-.|.+||..+..... ..|..+.... -.....+.++.++++++.. +-.
T Consensus 41 ~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~---~~~~~~~~ls~dgk~~~V~N~TPa 117 (342)
T PF06433_consen 41 VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQV---VPYKNMFALSADGKFLYVQNFTPA 117 (342)
T ss_dssp EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--B---S--GGGEEE-TTSSEEEEEEESSS
T ss_pred eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhee---cccccceEEccCCcEEEEEccCCC
Confidence 567999998886432 3467788876542111 0111111100 0122346788999988765 344
Q ss_pred CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC-CCEEEEE----EeCCCCCee-EEEEccC
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK-TGKCLKV----LPAHSDPVT-AVDFNRD 168 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~-~~~~~~~----~~~~~~~v~-~~~~~~~ 168 (321)
.+|.|-|+...+.+..+.-.. +..+--.+ ++.|.+-+.||.+.-..+. .|+.... +....+++. .-++...
T Consensus 118 ~SVtVVDl~~~kvv~ei~~PG--C~~iyP~~-~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~ 194 (342)
T PF06433_consen 118 TSVTVVDLAAKKVVGEIDTPG--CWLIYPSG-NRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRD 194 (342)
T ss_dssp EEEEEEETTTTEEEEEEEGTS--EEEEEEEE-TTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETT
T ss_pred CeEEEEECCCCceeeeecCCC--EEEEEecC-CCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECC
Confidence 578999998888776654222 22221122 2457777888998888776 3443321 111222332 3345555
Q ss_pred CCEEEEEeCCCeEEEEeCCCCce--eeeec--cC----C---CCCeEEEEEccCCCEEEEEec---CC-------eEEEE
Q 020798 169 GTMIVTSSYDGLCRIWDASTGHC--MKTLI--DD----E---NPPVSFVKFSPNGKFILVGTL---DN-------TLRLW 227 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~~--~~~~~--~~----~---~~~~~~~~~~~~g~~l~~~~~---d~-------~i~i~ 227 (321)
+..++..+.+|.|+-.|+..... ...+. .. . ...-..+++++..+.|++--. ++ .|.+|
T Consensus 195 ~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~ 274 (342)
T PF06433_consen 195 GGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVY 274 (342)
T ss_dssp TTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEE
T ss_pred CCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEE
Confidence 66777789999999888865432 11111 00 0 012334778876555544321 11 48889
Q ss_pred eCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEE-eCCCCeEEEEEcccceEEEEecCC
Q 020798 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVS-GSEDSCVYLWELQSRKVVQKLEGH 286 (321)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~h 286 (321)
|+.+++.+..+.... ....+. ....+..+|++ ...++.|.+||..+++.+.+++.-
T Consensus 275 D~~t~krv~Ri~l~~-~~~Si~--Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 275 DLKTHKRVARIPLEH-PIDSIA--VSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp ETTTTEEEEEEEEEE-EESEEE--EESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred ECCCCeEEEEEeCCC-ccceEE--EccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence 999999998886422 222232 22334445654 456899999999999999888753
No 333
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.37 E-value=0.00018 Score=63.36 Aligned_cols=213 Identities=14% Similarity=0.114 Sum_probs=120.9
Q ss_pred EECCCCCEEEE-EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCC----cEEEEecCCCEEEEEEe
Q 020798 80 VFSSDSRFLVS-ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE----TVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 80 ~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~wd~~~~~~~~~~~ 154 (321)
-++|||+.+.. .-..+.+.+.|.++.+...++.- ......++++|+++++++.+.+. ++...+.........+.
T Consensus 199 PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn 277 (635)
T PRK02888 199 PLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN 277 (635)
T ss_pred ccCCCCCEeecccceeEEEEEEECccceEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEc
Confidence 34556654432 22234566677776655444432 22345678899999887775322 22222221111111110
Q ss_pred CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC-----CceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEe
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST-----GHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWN 228 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d 228 (321)
...+ -++.++|+.... .++.|.+.|.++ ......+.. ......+.++|||+++++++ .++++.|+|
T Consensus 278 --i~~i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPV--GKsPHGV~vSPDGkylyVanklS~tVSVID 349 (635)
T PRK02888 278 --IARI--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPV--PKNPHGVNTSPDGKYFIANGKLSPTVTVID 349 (635)
T ss_pred --hHHH--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEEC--CCCccceEECCCCCEEEEeCCCCCcEEEEE
Confidence 0000 123456765554 367899999987 333444432 33456789999999988765 588999999
Q ss_pred CCCCcE------------EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc----------ceEEEEecCC
Q 020798 229 YSTGKI------------LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS----------RKVVQKLEGH 286 (321)
Q Consensus 229 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~----------~~~~~~~~~h 286 (321)
+.+.+. +....--.++ +-..| ..+|....+-..|..|..|++.. ...+.++.-|
T Consensus 350 v~k~k~~~~~~~~~~~~vvaevevGlGP---LHTaF-Dg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~ 425 (635)
T PRK02888 350 VRKLDDLFDGKIKPRDAVVAEPELGLGP---LHTAF-DGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVH 425 (635)
T ss_pred ChhhhhhhhccCCccceEEEeeccCCCc---ceEEE-CCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCC
Confidence 987542 2333221222 22233 35677777778899999999876 3455666555
Q ss_pred CCCeE-----EEEecCCCceEEEE
Q 020798 287 TDPVI-----SVASHPTENIIASG 305 (321)
Q Consensus 287 ~~~v~-----~~~~~p~~~~l~s~ 305 (321)
-++-. +=.-.|+|++|++.
T Consensus 426 y~pgh~~~~~g~t~~~dgk~l~~~ 449 (635)
T PRK02888 426 YQPGHNHASMGETKEADGKWLVSL 449 (635)
T ss_pred CccceeeecCCCcCCCCCCEEEEc
Confidence 44322 22347888888876
No 334
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.37 E-value=0.00066 Score=53.68 Aligned_cols=193 Identities=14% Similarity=0.204 Sum_probs=109.8
Q ss_pred eecCcccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEEEEEeCCC-CCeeEEEEccCCCEEEEEeCCCeEEEEeCCC
Q 020798 111 LIGHTNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCLKVLPAHS-DPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188 (321)
Q Consensus 111 ~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 188 (321)
+.+-...+..++|+|+.+. +++....+.|..++. +|+.+..++... .....+++..++.++++.-.++.+.++++..
T Consensus 17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~ 95 (248)
T PF06977_consen 17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDD 95 (248)
T ss_dssp -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE--
T ss_pred CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEec
Confidence 3444556899999998664 566677888888886 477777776443 5578899987777666666689999888732
Q ss_pred Cc------eeeee----ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC---CcEEEEE--eccC---CceeEEE-
Q 020798 189 GH------CMKTL----IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST---GKILKTY--TGHT---NSKYCIS- 249 (321)
Q Consensus 189 ~~------~~~~~----~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~---~~~~~~~--~~~~---~~~~~~~- 249 (321)
.. ....+ ....+..+..++|+|.++.|+++.......+|.+.. ...+... .... ....-++
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~ 175 (248)
T PF06977_consen 96 DTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSG 175 (248)
T ss_dssp --TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---E
T ss_pred cccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccc
Confidence 11 11111 112445688999999988888888777777776543 2222111 1111 0011122
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC---------CCeEEEEecCCCceEEEE
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT---------DPVISVASHPTENIIASG 305 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~---------~~v~~~~~~p~~~~l~s~ 305 (321)
..+.+..+.+++-......|..+| .+++.+..+.-.. ..--.+++.++|++.++.
T Consensus 176 l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs 239 (248)
T PF06977_consen 176 LSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS 239 (248)
T ss_dssp EEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE
T ss_pred eEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc
Confidence 234556788888888899999999 5566655443211 235789999999888874
No 335
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.32 E-value=0.00065 Score=57.50 Aligned_cols=233 Identities=19% Similarity=0.235 Sum_probs=120.9
Q ss_pred CCCCCEEEEEe---------CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE
Q 020798 82 SSDSRFLVSAS---------DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 82 ~~~~~~l~~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 152 (321)
|||+++++... ..+.+.+||+.+++... +......+....|+|+|+.++... ++.|++++..++...+.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~-l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~l 78 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITP-LTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQL 78 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEE-SS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEES
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEE-CcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEe
Confidence 57777776532 23568899999876433 222245677889999999988765 57899999877754432
Q ss_pred EeCC-----------------CCCeeEEEEccCCCEEEEEeCC-CeE---------------------------------
Q 020798 153 LPAH-----------------SDPVTAVDFNRDGTMIVTSSYD-GLC--------------------------------- 181 (321)
Q Consensus 153 ~~~~-----------------~~~v~~~~~~~~~~~l~~~~~d-g~i--------------------------------- 181 (321)
-... -+.-..+.|+||++.|+....| ..+
T Consensus 79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v 158 (353)
T PF00930_consen 79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRV 158 (353)
T ss_dssp ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EE
T ss_pred ccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCce
Confidence 1111 1123578899999988776322 222
Q ss_pred --EEEeCCCCceeeee-c---cCCCCCeEEEEEccCCCEEEEEecC-----CeEEEEeCCCCcEEEEEeccCC-ce-eEE
Q 020798 182 --RIWDASTGHCMKTL-I---DDENPPVSFVKFSPNGKFILVGTLD-----NTLRLWNYSTGKILKTYTGHTN-SK-YCI 248 (321)
Q Consensus 182 --~~~d~~~~~~~~~~-~---~~~~~~~~~~~~~~~g~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~-~~-~~~ 248 (321)
.++|+.+++..... . ......+..+.|.++++.|+..-.+ ..+.++|..++........... -. ..-
T Consensus 159 ~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~ 238 (353)
T PF00930_consen 159 SLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYD 238 (353)
T ss_dssp EEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSS
T ss_pred EEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeec
Confidence 22333322211000 0 1122335678888888844443322 2467778776654332222111 00 000
Q ss_pred EeEEE-ecCCeEEEEeCCCCe--EEEEEcccceEEEEecCCCCCeEE-EEecCCCceEE-EEeecCCccEEEcc
Q 020798 249 SSTFS-VTNGKYIVSGSEDSC--VYLWELQSRKVVQKLEGHTDPVIS-VASHPTENIIA-SGALDNDRTVKIWT 317 (321)
Q Consensus 249 ~~~~~-~~~~~~l~~~~~dg~--i~vwd~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~-s~~~d~~~~i~iw~ 317 (321)
...+. ..+..++.....+|. |.+++...+. ...+....-.|.. +.++++++.|. ++..++...-.||.
T Consensus 239 ~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~ 311 (353)
T PF00930_consen 239 PPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYR 311 (353)
T ss_dssp EEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEE
T ss_pred ccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEE
Confidence 11222 344556665567775 4555555444 3455545556755 56777765443 44433333444443
No 336
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.30 E-value=0.00061 Score=58.79 Aligned_cols=219 Identities=16% Similarity=0.182 Sum_probs=103.3
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
..-....+.++|+|+.+++++ ||.-.+|.-.. .+ ....+.-....|.+.++ +|+-...++|.|+.
T Consensus 31 ~~~~p~~ls~npngr~v~V~g-~geY~iyt~~~-----------~r--~k~~G~g~~~vw~~~n~-yAv~~~~~~I~I~k 95 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLVCG-DGEYEIYTALA-----------WR--NKAFGSGLSFVWSSRNR-YAVLESSSTIKIYK 95 (443)
T ss_dssp -SS--SEEEE-TTSSEEEEEE-TTEEEEEETTT-----------TE--EEEEEE-SEEEE-TSSE-EEEE-TTS-EEEEE
T ss_pred CCcCCeeEEECCCCCEEEEEc-CCEEEEEEccC-----------Cc--ccccCceeEEEEecCcc-EEEEECCCeEEEEE
Confidence 444578899999999999966 66666764110 01 11234445678888655 55566688899963
Q ss_pred cCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeE
Q 020798 102 VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 181 (321)
--+.+..+.+... ..+..+-. |..|+..+. +.|.+||+.+++.+..+... +|..+.|++++++++..+.+ .+
T Consensus 96 n~~~~~~k~i~~~-~~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i 167 (443)
T PF04053_consen 96 NFKNEVVKSIKLP-FSVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SI 167 (443)
T ss_dssp TTEE-TT-----S-S-EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SE
T ss_pred cCccccceEEcCC-cccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eE
Confidence 2222222222211 12223322 777766654 48999999999999888643 48999999999999888866 45
Q ss_pred EEEeCCCC----------c-eeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc--EEEEEeccCCceeEE
Q 020798 182 RIWDASTG----------H-CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK--ILKTYTGHTNSKYCI 248 (321)
Q Consensus 182 ~~~d~~~~----------~-~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~ 248 (321)
.+++.... + .... .......|.+..|..+ .++-.+.. .|+.+ ..|+ .+..+ ..+.+.+
T Consensus 168 ~il~~~~~~~~~~~~~g~e~~f~~-~~E~~~~IkSg~W~~d--~fiYtT~~-~lkYl--~~Ge~~~i~~l---d~~~yll 238 (443)
T PF04053_consen 168 YILKYNLEAVAAIPEEGVEDAFEL-IHEISERIKSGCWVED--CFIYTTSN-HLKYL--VNGETGIIAHL---DKPLYLL 238 (443)
T ss_dssp EEEEE-HHHHHHBTTTB-GGGEEE-EEEE-S--SEEEEETT--EEEEE-TT-EEEEE--ETTEEEEEEE----SS--EEE
T ss_pred EEEEecchhcccccccCchhceEE-EEEecceeEEEEEEcC--EEEEEcCC-eEEEE--EcCCcceEEEc---CCceEEE
Confidence 66654322 0 1111 1111334566667655 33333333 66653 2232 22222 2223322
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
.. .+....+.....|+.|..+.+.
T Consensus 239 gy---~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 239 GY---LPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp EE---ETTTTEEEEE-TT--EEEEE--
T ss_pred EE---EccCCEEEEEECCCCEEEEEEC
Confidence 21 1233455556667777666654
No 337
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.27 E-value=0.00021 Score=64.07 Aligned_cols=108 Identities=10% Similarity=0.173 Sum_probs=80.2
Q ss_pred EEEECCCCCEEEEec----CCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC
Q 020798 28 SVKFSHDGRLLASSS----ADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP 103 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~----~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 103 (321)
-..|+|...++|+++ ..|.+.||--.+. |.. --+++-| +.+++|+|..-.|+.|-.-|.+.+|...
T Consensus 20 i~SWHPsePlfAVA~fS~er~GSVtIfadtGE------Pqr-~Vt~P~h---atSLCWHpe~~vLa~gwe~g~~~v~~~~ 89 (1416)
T KOG3617|consen 20 ISSWHPSEPLFAVASFSPERGGSVTIFADTGE------PQR-DVTYPVH---ATSLCWHPEEFVLAQGWEMGVSDVQKTN 89 (1416)
T ss_pred ccccCCCCceeEEEEecCCCCceEEEEecCCC------CCc-cccccee---hhhhccChHHHHHhhccccceeEEEecC
Confidence 357888888888764 3578888743221 111 1112222 4569999998888889889999999987
Q ss_pred CcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
+.+.......|..++..+.|+|+|+.++++..-|.+.+|...
T Consensus 90 ~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 90 TTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 766544456799999999999999999999999999999753
No 338
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.26 E-value=0.0028 Score=56.14 Aligned_cols=223 Identities=17% Similarity=0.213 Sum_probs=123.7
Q ss_pred CEEEEEeCCCcEEEEecCCcceeeeeecCccc--EEEEEECC--CCCEEEEee---------CCCcEEEEecCCCEEEEE
Q 020798 86 RFLVSASDDKTIRLWDVPTATCLKTLIGHTNY--VFCVNFNP--QSNMIVSGA---------FDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~~~~---------~dg~i~~wd~~~~~~~~~ 152 (321)
..++.++.++.|.-+|.++++.+-........ -..+.-+| .+..++.++ .++.+..+|..+++.+-.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 56777888999999999999876554322210 00111111 124444443 367889999999987665
Q ss_pred EeCCCC--------------------Ce-eEEEEccCCCEEEEEeCCC------------------eEEEEeCCCCceee
Q 020798 153 LPAHSD--------------------PV-TAVDFNRDGTMIVTSSYDG------------------LCRIWDASTGHCMK 193 (321)
Q Consensus 153 ~~~~~~--------------------~v-~~~~~~~~~~~l~~~~~dg------------------~i~~~d~~~~~~~~ 193 (321)
++.... .+ .+.++.+.+..++.++.++ .+.-+|..+++..-
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W 270 (488)
T cd00216 191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKW 270 (488)
T ss_pred eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEE
Confidence 543211 01 1234444556777776554 68888999988765
Q ss_pred eeccCCC--------CCeEEEEE-ccCCC---EEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEE
Q 020798 194 TLIDDEN--------PPVSFVKF-SPNGK---FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261 (321)
Q Consensus 194 ~~~~~~~--------~~~~~~~~-~~~g~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 261 (321)
....... ........ .-+|. .+++++.+|.+..+|.++++++-........ +. ..+ +..++
T Consensus 271 ~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~---~~---~~~-~~vyv 343 (488)
T cd00216 271 FYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQP---MA---YDP-GLVYL 343 (488)
T ss_pred EeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeeccc---cc---cCC-ceEEE
Confidence 5422111 00000111 11333 5777888999999999999987765321000 00 001 22111
Q ss_pred E-----------------eCCCCeEEEEEcccceEEEEecCCC--------CCeE--EEEecCCCceEEEEeecCCccEE
Q 020798 262 S-----------------GSEDSCVYLWELQSRKVVQKLEGHT--------DPVI--SVASHPTENIIASGALDNDRTVK 314 (321)
Q Consensus 262 ~-----------------~~~dg~i~vwd~~~~~~~~~~~~h~--------~~v~--~~~~~p~~~~l~s~~~d~~~~i~ 314 (321)
. ...+|.|.-.|+.+++.+.+..... .+.. .++. .+..|..|+ .||.|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~--~dG~l~ 419 (488)
T cd00216 344 GAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGA--ADGYFR 419 (488)
T ss_pred ccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEEC--CCCeEE
Confidence 1 1246778888888888776654321 1111 1222 345666665 357787
Q ss_pred Ecccc
Q 020798 315 IWTQE 319 (321)
Q Consensus 315 iw~~~ 319 (321)
.+|.+
T Consensus 420 ald~~ 424 (488)
T cd00216 420 AFDAT 424 (488)
T ss_pred EEECC
Confidence 77764
No 339
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.25 E-value=0.0029 Score=56.00 Aligned_cols=186 Identities=19% Similarity=0.288 Sum_probs=109.0
Q ss_pred CCCcEEEEecCCcceeeeeecCcc--------------------cE-EEEEECCCCCEEEEeeCCC--------------
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTN--------------------YV-FCVNFNPQSNMIVSGAFDE-------------- 137 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~--------------------~v-~~~~~~~~~~~l~~~~~dg-------------- 137 (321)
.++.+..+|..+++.+-....... .+ ...++.+.+..++.++.++
T Consensus 173 ~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~ 252 (488)
T cd00216 173 VRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDN 252 (488)
T ss_pred CCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCC
Confidence 357788889888876554432110 01 1234455566777776554
Q ss_pred ----cEEEEecCCCEEEEEEeCCCCCee------EEEEc----cCCC---EEEEEeCCCeEEEEeCCCCceeeeeccCCC
Q 020798 138 ----TVRIWDVKTGKCLKVLPAHSDPVT------AVDFN----RDGT---MIVTSSYDGLCRIWDASTGHCMKTLIDDEN 200 (321)
Q Consensus 138 ----~i~~wd~~~~~~~~~~~~~~~~v~------~~~~~----~~~~---~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 200 (321)
.+.-+|.++++..-.++.-..... ...+. -++. .++.++.+|.+..+|.++++.+-......
T Consensus 253 ~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~- 331 (488)
T cd00216 253 LYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE- 331 (488)
T ss_pred CceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec-
Confidence 688999999987765532111111 01111 1232 57778889999999999998765432110
Q ss_pred CCeEEEEEccCCCEEEEE------------------ecCCeEEEEeCCCCcEEEEEeccCCc------eeEEEeEEEecC
Q 020798 201 PPVSFVKFSPNGKFILVG------------------TLDNTLRLWNYSTGKILKTYTGHTNS------KYCISSTFSVTN 256 (321)
Q Consensus 201 ~~~~~~~~~~~g~~l~~~------------------~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 256 (321)
..++.+| + .++.+ ..++.+.-+|+.+++.+-+....... ........ ...
T Consensus 332 ---~~~~~~~-~-~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~-~~~ 405 (488)
T cd00216 332 ---QPMAYDP-G-LVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSL-ATA 405 (488)
T ss_pred ---cccccCC-c-eEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcce-Eec
Confidence 1123333 2 22222 23578888999999877665432100 00000001 124
Q ss_pred CeEEEEeCCCCeEEEEEcccceEEEEecC
Q 020798 257 GKYIVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
+..++.++.||.|+.+|..+++.+.+.+-
T Consensus 406 g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 406 GNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 56788889999999999999999887654
No 340
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.22 E-value=8.8e-06 Score=69.58 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=61.6
Q ss_pred ccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC
Q 020798 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147 (321)
Q Consensus 72 h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 147 (321)
....|.+++++|+.+.|+.|+.||+|.+||...+..... ...-....++|+|+|..+++|+..|.+.+||+.-.
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 456789999999999999999999999999877643322 23344678999999999999999999999998644
No 341
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.18 E-value=0.0023 Score=56.68 Aligned_cols=222 Identities=16% Similarity=0.220 Sum_probs=126.3
Q ss_pred CCCEEEEEeC-CCcEEEEecCCcceeeee---------------ecCcccEEE-----EEECCCCCEEEE-eeCCCcEEE
Q 020798 84 DSRFLVSASD-DKTIRLWDVPTATCLKTL---------------IGHTNYVFC-----VNFNPQSNMIVS-GAFDETVRI 141 (321)
Q Consensus 84 ~~~~l~~~~~-d~~i~iwd~~~~~~~~~~---------------~~~~~~v~~-----~~~~~~~~~l~~-~~~dg~i~~ 141 (321)
||++|+.-.. +..|...+++..++-+.+ ..++++|.+ +-++|||+.+.. .-..+.+.+
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv 219 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA 219 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence 6788876543 445666666544432211 122333332 234566665432 334567778
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC----eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEE
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG----LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
.|..+.+...++.... ....++++|++.++.+.+.+. ++...+.........+- . .. .-++.++|++...
T Consensus 220 ID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn--i-~~--iea~vkdGK~~~V 293 (635)
T PRK02888 220 VDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN--I-AR--IEEAVKAGKFKTI 293 (635)
T ss_pred EECccceEEEEEEeCC-CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEc--h-HH--HHHhhhCCCEEEE
Confidence 8888776665554433 345678899999887776432 23332222111000000 0 00 0133457877665
Q ss_pred EecCCeEEEEeCCC-----CcEEEEEeccCCceeEEEeEEEecCCeEEEEe-CCCCeEEEEEcccceE------------
Q 020798 218 GTLDNTLRLWNYST-----GKILKTYTGHTNSKYCISSTFSVTNGKYIVSG-SEDSCVYLWELQSRKV------------ 279 (321)
Q Consensus 218 ~~~d~~i~i~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~------------ 279 (321)
.++.|.++|.++ .+.+..+.....+ ..+. ..|||++++++ ..+.+|.|.|+.+.+.
T Consensus 294 --~gn~V~VID~~t~~~~~~~v~~yIPVGKsP-HGV~---vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~v 367 (635)
T PRK02888 294 --GGSKVPVVDGRKAANAGSALTRYVPVPKNP-HGVN---TSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAV 367 (635)
T ss_pred --CCCEEEEEECCccccCCcceEEEEECCCCc-cceE---ECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceE
Confidence 367899999988 4555555433322 2222 24788876655 5689999999987542
Q ss_pred EEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 280 VQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 280 ~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+.+.+--.+| ...+|.++|+...|-..| ..|-.|++++
T Consensus 368 vaevevGlGP-LHTaFDg~G~aytslf~d--sqv~kwn~~~ 405 (635)
T PRK02888 368 VAEPELGLGP-LHTAFDGRGNAYTTLFLD--SQIVKWNIEA 405 (635)
T ss_pred EEeeccCCCc-ceEEECCCCCEEEeEeec--ceeEEEehHH
Confidence 3333332333 567889999888877765 5788999864
No 342
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.17 E-value=0.0025 Score=52.14 Aligned_cols=238 Identities=13% Similarity=0.223 Sum_probs=131.3
Q ss_pred EEEEECCCCCEEEEEe----------CCCcEEEEecCCcceeeeeecCc-------ccEEEEEECCCCCEEEEee--CCC
Q 020798 77 SDLVFSSDSRFLVSAS----------DDKTIRLWDVPTATCLKTLIGHT-------NYVFCVNFNPQSNMIVSGA--FDE 137 (321)
Q Consensus 77 ~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~--~dg 137 (321)
..+..+|+++.+++++ ..-.|.+||..+-.....+.-.. ......+++.++++++... -..
T Consensus 39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~ 118 (342)
T PF06433_consen 39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPAT 118 (342)
T ss_dssp EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSE
T ss_pred CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCC
Confidence 4467899999888753 23358999998876554332111 1122356778888776543 345
Q ss_pred cEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCC-CCceeee---eccC-CCCCeEEEEEccCC
Q 020798 138 TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-TGHCMKT---LIDD-ENPPVSFVKFSPNG 212 (321)
Q Consensus 138 ~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~~~~---~~~~-~~~~~~~~~~~~~g 212 (321)
.|.|.|+..++.+..++... +.. .+-...+.|.+-+.||.+.-..+. .|+...+ ++.. ..+....-++...+
T Consensus 119 SVtVVDl~~~kvv~ei~~PG--C~~-iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~ 195 (342)
T PF06433_consen 119 SVTVVDLAAKKVVGEIDTPG--CWL-IYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDG 195 (342)
T ss_dssp EEEEEETTTTEEEEEEEGTS--EEE-EEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTT
T ss_pred eEEEEECCCCceeeeecCCC--EEE-EEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCC
Confidence 67888888888777665422 222 221122457788889988877776 4443322 2222 22222333454444
Q ss_pred CEEEEEecCCeEEEEeCCCCcEE--EEEeccC----Cce-----eEEEeEEEecCCeEEEE--eCC-----CC--eEEEE
Q 020798 213 KFILVGTLDNTLRLWNYSTGKIL--KTYTGHT----NSK-----YCISSTFSVTNGKYIVS--GSE-----DS--CVYLW 272 (321)
Q Consensus 213 ~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~----~~~-----~~~~~~~~~~~~~~l~~--~~~-----dg--~i~vw 272 (321)
..++-.+.+|.|+-.|+...... ..+.... ... +.+. .+....+++++. .+. |+ .|-++
T Consensus 196 ~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~-A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~ 274 (342)
T PF06433_consen 196 GRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLI-AYHAASGRLYVLMHQGGEGSHKDPGTEVWVY 274 (342)
T ss_dssp TEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-E-EEETTTTEEEEEEEE--TT-TTS-EEEEEEE
T ss_pred CeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeee-eeccccCeEEEEecCCCCCCccCCceEEEEE
Confidence 44544678899999888765432 2222110 000 1111 122233333221 111 22 46777
Q ss_pred EcccceEEEEecCCCCCeEEEEecCCCc-eEEEEeecCCccEEEccccc
Q 020798 273 ELQSRKVVQKLEGHTDPVISVASHPTEN-IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 273 d~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~~~d~~~~i~iw~~~~ 320 (321)
|+.+++.+.++.. ..++.+++.+.+.. +|.+.+ .+++.+.+||...
T Consensus 275 D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~-~~~~~l~v~D~~t 321 (342)
T PF06433_consen 275 DLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALS-AGDGTLDVYDAAT 321 (342)
T ss_dssp ETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEE-TTTTEEEEEETTT
T ss_pred ECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEc-CCCCeEEEEeCcC
Confidence 8899999988874 34688999998875 454433 3568899999753
No 343
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.16 E-value=0.0036 Score=53.51 Aligned_cols=225 Identities=18% Similarity=0.231 Sum_probs=138.0
Q ss_pred cEEEEEECCCCCEEEEEe-CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEEE
Q 020798 75 GVSDLVFSSDSRFLVSAS-DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~ 152 (321)
....+.+.+++..+.... ....+...+............-......+++++.++.+ +....+..|.+.|..+.+....
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~ 111 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGS 111 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeE
Confidence 345567778875544333 22234444444222111111111334567888888754 4555568999999887776666
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeC---CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEe
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSY---DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWN 228 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d 228 (321)
..... ....++++|++..+..+.. ++++.+.|..+.+......... .+ ..++++|+|+.+.+.. .++.|.++|
T Consensus 112 ~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~-~P-~~~a~~p~g~~vyv~~~~~~~v~vi~ 188 (381)
T COG3391 112 IPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGN-TP-TGVAVDPDGNKVYVTNSDDNTVSVID 188 (381)
T ss_pred eeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCC-Cc-ceEEECCCCCeEEEEecCCCeEEEEe
Confidence 55433 4568999999987766654 6899999998887777643333 23 7789999999776655 688999999
Q ss_pred CCCCcEEE-E----EeccCCceeEEEeEEEecCCeEEEEeCC---CCeEEEEEcccceEEEE-ecCCCCCeEEEEecCCC
Q 020798 229 YSTGKILK-T----YTGHTNSKYCISSTFSVTNGKYIVSGSE---DSCVYLWELQSRKVVQK-LEGHTDPVISVASHPTE 299 (321)
Q Consensus 229 ~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~-~~~h~~~v~~~~~~p~~ 299 (321)
.......+ . ......+ . .....++|.++..... ++.+...|..++..... +..-...-..+..+|+|
T Consensus 189 ~~~~~v~~~~~~~~~~~~~~P-~---~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g 264 (381)
T COG3391 189 TSGNSVVRGSVGSLVGVGTGP-A---GIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAG 264 (381)
T ss_pred CCCcceeccccccccccCCCC-c---eEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCC
Confidence 77665553 1 1111111 1 1223356765444332 36899999888776553 21111145678899999
Q ss_pred ceEEEEe
Q 020798 300 NIIASGA 306 (321)
Q Consensus 300 ~~l~s~~ 306 (321)
..+-...
T Consensus 265 ~~~yv~~ 271 (381)
T COG3391 265 KAAYVAN 271 (381)
T ss_pred CEEEEEe
Confidence 8877663
No 344
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.13 E-value=0.0002 Score=61.71 Aligned_cols=143 Identities=13% Similarity=0.196 Sum_probs=79.3
Q ss_pred CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEE
Q 020798 156 HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL 235 (321)
Q Consensus 156 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~ 235 (321)
.......+.++|+++.+++ +.+|...++.....+... . .....+.|.+.++ +++-...+.|.|+.--+.+..
T Consensus 31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~-~-----G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~~ 102 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKA-F-----GSGLSFVWSSRNR-YAVLESSSTIKIYKNFKNEVV 102 (443)
T ss_dssp -SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEE-E-----EE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-TT
T ss_pred CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCcccc-c-----CceeEEEEecCcc-EEEEECCCeEEEEEcCccccc
Confidence 3445688999999998877 566777788744332211 1 1123567888555 566666888999742222222
Q ss_pred EEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEE
Q 020798 236 KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKI 315 (321)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~i 315 (321)
..+.... .+...|. |..|+..+. +.|.+||..+++.+.++... +|..+.|++++.++|-.+.+ .+.|
T Consensus 103 k~i~~~~----~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~---~i~i 169 (443)
T PF04053_consen 103 KSIKLPF----SVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD---SIYI 169 (443)
T ss_dssp -----SS-----EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S----SEEE
T ss_pred eEEcCCc----ccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC---eEEE
Confidence 2332211 1222332 666665544 48999999999999988743 49999999999999998743 5777
Q ss_pred cccc
Q 020798 316 WTQE 319 (321)
Q Consensus 316 w~~~ 319 (321)
++.+
T Consensus 170 l~~~ 173 (443)
T PF04053_consen 170 LKYN 173 (443)
T ss_dssp EEE-
T ss_pred EEec
Confidence 7654
No 345
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.12 E-value=0.0024 Score=55.02 Aligned_cols=161 Identities=17% Similarity=0.173 Sum_probs=96.6
Q ss_pred ccEEEEEECCCCCEEEEE---eCC-CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEE-eeCCC--cEEEEecCC
Q 020798 74 QGVSDLVFSSDSRFLVSA---SDD-KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS-GAFDE--TVRIWDVKT 146 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~---~~d-~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg--~i~~wd~~~ 146 (321)
..+..-+|+|+++.++.. ... ..+.++++.+++...... ....-...+|+|||++|+. ...|| .|+++|+..
T Consensus 193 ~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~ 271 (425)
T COG0823 193 SLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDG 271 (425)
T ss_pred cceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCC
Confidence 445566899998866543 222 458889998876433322 2222334679999988654 44555 467778877
Q ss_pred CEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-CC
Q 020798 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-DN 222 (321)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d~ 222 (321)
+...+ +....+.-..-.|+|+|+.++..+. .| .|.+++...... ..+...... -..-.++|+|++++..+. +|
T Consensus 272 ~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~-~~~p~~SpdG~~i~~~~~~~g 348 (425)
T COG0823 272 KNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGG-NSNPVWSPDGDKIVFESSSGG 348 (425)
T ss_pred Cccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCC-CcCccCCCCCCEEEEEeccCC
Confidence 66333 4433444456789999998876654 44 456666665544 222222221 225679999999987664 34
Q ss_pred e--EEEEeCCCCcEEEEE
Q 020798 223 T--LRLWNYSTGKILKTY 238 (321)
Q Consensus 223 ~--i~i~d~~~~~~~~~~ 238 (321)
. |.+.|+.++..++.+
T Consensus 349 ~~~i~~~~~~~~~~~~~l 366 (425)
T COG0823 349 QWDIDKNDLASGGKIRIL 366 (425)
T ss_pred ceeeEEeccCCCCcEEEc
Confidence 4 666666555433333
No 346
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.12 E-value=7.6e-07 Score=76.36 Aligned_cols=164 Identities=18% Similarity=0.326 Sum_probs=105.2
Q ss_pred ccCCcccEEEEEECC-CCCEEEEe----cCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 19 LNGHLRAISSVKFSH-DGRLLASS----SADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~-~g~~l~~~----~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
..+|.+..++++|++ |.+.||.| ..|..+.|||+....- .|.+..+-..+-..+..+++|-.+.+.+.+|..
T Consensus 98 tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~lt---vPke~~~fs~~~l~gqns~cwlrd~klvlaGm~ 174 (783)
T KOG1008|consen 98 TPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLT---VPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMT 174 (783)
T ss_pred cccccccccccccccccHHHHHhhhhhhcccCCccceecccccC---CCccccccccccccCccccccccCcchhhcccc
Confidence 467889999999997 56677776 3467899999876532 111111111123345668889989999999999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEe-cCCCE-EEEEEeCC----CCCeeEEEEc
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWD-VKTGK-CLKVLPAH----SDPVTAVDFN 166 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd-~~~~~-~~~~~~~~----~~~v~~~~~~ 166 (321)
.+.+.++|++-..... ..-.+..+..+.+.| .++++++-. ||.|-+|| .++-+ +...+... ...+..++|+
T Consensus 175 sr~~~ifdlRqs~~~~-~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~ayc 252 (783)
T KOG1008|consen 175 SRSVHIFDLRQSLDSV-SSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYC 252 (783)
T ss_pred cchhhhhhhhhhhhhh-hhhhhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEec
Confidence 9999999987332111 111233466677888 667776644 99999999 33222 12222111 1248899999
Q ss_pred cCCC-EEEEEe-CCCeEEEEeCC
Q 020798 167 RDGT-MIVTSS-YDGLCRIWDAS 187 (321)
Q Consensus 167 ~~~~-~l~~~~-~dg~i~~~d~~ 187 (321)
|..+ .+++.. ..++|+++|+.
T Consensus 253 Ptrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 253 PTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred cCCcchhhhhccCcceEEEeccc
Confidence 9654 344444 56789999975
No 347
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.11 E-value=0.0024 Score=49.64 Aligned_cols=99 Identities=12% Similarity=0.079 Sum_probs=68.7
Q ss_pred CCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEE
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 163 (321)
-|++++.|+..|.+++.+..++.....+......-......+++..+..++.|++.+..|.++..++...+.......+-
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP 141 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSP 141 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccc
Confidence 46789999999999999999986544443322222234467889999999999999999999988888776655444455
Q ss_pred EEccCCCEEEEEeCCCeEE
Q 020798 164 DFNRDGTMIVTSSYDGLCR 182 (321)
Q Consensus 164 ~~~~~~~~l~~~~~dg~i~ 182 (321)
+..|....|..+...|.+.
T Consensus 142 ~i~~g~~sly~a~t~G~vl 160 (354)
T KOG4649|consen 142 VIAPGDGSLYAAITAGAVL 160 (354)
T ss_pred eecCCCceEEEEeccceEE
Confidence 5666333444444445443
No 348
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.10 E-value=0.004 Score=51.96 Aligned_cols=275 Identities=20% Similarity=0.245 Sum_probs=122.5
Q ss_pred EECCCCCEEEE-ecCCceEEEeeccccCCCCCCCCCccccccccc-ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcce
Q 020798 30 KFSHDGRLLAS-SSADKTLLTYSLSSISNSDSTPPSPLQKFTGHE-QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC 107 (321)
Q Consensus 30 ~~s~~g~~l~~-~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 107 (321)
+|.+||+.|+- +..|+.-.+|.+.-. ...+..++... .......++|+.+.++.......|+..|+.+.+.
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~-------t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~ 114 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLA-------TGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEE 114 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETT-------T-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--E
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcc-------cCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcE
Confidence 57889976655 444666655543211 01122233222 1122356678888877666667898899988875
Q ss_pred eeeeecCcccEEEEEE--CCCCCEEEEee---C-------------------CCcEEEEecCCCEEEEEEeCCCCCeeEE
Q 020798 108 LKTLIGHTNYVFCVNF--NPQSNMIVSGA---F-------------------DETVRIWDVKTGKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 108 ~~~~~~~~~~v~~~~~--~~~~~~l~~~~---~-------------------dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 163 (321)
...+......+-...| +.++..++-.- . ...|...|+++|+....+. ...-+..+
T Consensus 115 ~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~ 193 (386)
T PF14583_consen 115 RVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHV 193 (386)
T ss_dssp EEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEE
T ss_pred EEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCc
Confidence 4434434444433334 44555543221 1 1235555677776544443 34456778
Q ss_pred EEccCCCEEE-EEeC---CC-eEEEEeCCC-CceeeeeccC-CCCCeEEEEEccCCCEEEEEe-----cCCeEEEEeCCC
Q 020798 164 DFNRDGTMIV-TSSY---DG-LCRIWDAST-GHCMKTLIDD-ENPPVSFVKFSPNGKFILVGT-----LDNTLRLWNYST 231 (321)
Q Consensus 164 ~~~~~~~~l~-~~~~---dg-~i~~~d~~~-~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~-----~d~~i~i~d~~~ 231 (321)
.|+|....++ .|-+ +. .-|+|-+++ +...+.+... ....+..=-|.|+|..|.--+ .+..|.-+|+.+
T Consensus 194 ~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t 273 (386)
T PF14583_consen 194 QFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDT 273 (386)
T ss_dssp EEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT
T ss_pred ccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCC
Confidence 8898655444 4432 22 235665432 2222222111 122234446889998776532 234577778887
Q ss_pred CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC----------------CeEEEEEcccceEE--EE-------ecCC
Q 020798 232 GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED----------------SCVYLWELQSRKVV--QK-------LEGH 286 (321)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----------------g~i~vwd~~~~~~~--~~-------~~~h 286 (321)
++........ .+.- ..+.+||.+++.=+.| ..|++++++.++.. .. ++++
T Consensus 274 ~~~~~~~~~p----~~~H-~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~ 348 (386)
T PF14583_consen 274 GERRRLMEMP----WCSH-FMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGD 348 (386)
T ss_dssp --EEEEEEE-----SEEE-EEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTB
T ss_pred CCceEEEeCC----ceee-eEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCC
Confidence 7553322211 1221 2234677776643333 25677888765532 11 1222
Q ss_pred CCC-eEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 287 TDP-VISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 287 ~~~-v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
... =....|+||+++++-.| |..|...||-.
T Consensus 349 ~q~~hPhp~FSPDgk~VlF~S-d~~G~~~vY~v 380 (386)
T PF14583_consen 349 RQVTHPHPSFSPDGKWVLFRS-DMEGPPAVYLV 380 (386)
T ss_dssp SSTT----EE-TTSSEEEEEE--TTSS-EEEEE
T ss_pred CccCCCCCccCCCCCEEEEEC-CCCCCccEEEE
Confidence 211 14578999999998877 34566666644
No 349
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.08 E-value=0.00074 Score=58.05 Aligned_cols=189 Identities=18% Similarity=0.175 Sum_probs=105.8
Q ss_pred eeeecCcccEEEEEECCCCCEEEEe---eCC-CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe-CCC--eE
Q 020798 109 KTLIGHTNYVFCVNFNPQSNMIVSG---AFD-ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS-YDG--LC 181 (321)
Q Consensus 109 ~~~~~~~~~v~~~~~~~~~~~l~~~---~~d-g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg--~i 181 (321)
..+..-...+..-+|+|++..++.. ... ..++++++.+++...... ....-...+|+|||+.++.+. .|| .|
T Consensus 186 ~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~i 264 (425)
T COG0823 186 QKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDI 264 (425)
T ss_pred eEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccE
Confidence 3333334456667889998776543 222 468999998876554443 233445678999999877654 455 46
Q ss_pred EEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-CC--eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe
Q 020798 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-DN--TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258 (321)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (321)
.++|+.+....+ +... ...-..-.|+|+|++++-.+. .| .|.+++...... ..+........ .....+||+
T Consensus 265 y~~dl~~~~~~~-Lt~~-~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~---~p~~SpdG~ 338 (425)
T COG0823 265 YLMDLDGKNLPR-LTNG-FGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNS---NPVWSPDGD 338 (425)
T ss_pred EEEcCCCCccee-cccC-CccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCc---CccCCCCCC
Confidence 677887665332 3222 222235679999999877653 44 466666665544 33332222211 122347888
Q ss_pred EEEEeCC-CCe--EEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 259 YIVSGSE-DSC--VYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 259 ~l~~~~~-dg~--i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
+++..+. +|. |.+.|+.++..+..+. +..-...-.|.|+++.+...
T Consensus 339 ~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~ 387 (425)
T COG0823 339 KIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMFS 387 (425)
T ss_pred EEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEEe
Confidence 8776553 344 5666665554333222 22222344556666655544
No 350
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.06 E-value=0.0031 Score=49.01 Aligned_cols=142 Identities=15% Similarity=0.119 Sum_probs=86.7
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
..+++.|+-.+.+.--|..++....... ....+.+-+.- -|++++.|...|.+++.+.++|.....+...+.-=....
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~ 100 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQ 100 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceE
Confidence 4567788888888888888876543321 11222221111 377899999999999999999976655543222112234
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
..+++..+..++.|++.+..|.++..++.+..-. +.....-++.|....|..+...|.+.--..
T Consensus 101 ~d~~~glIycgshd~~~yalD~~~~~cVykskcg-G~~f~sP~i~~g~~sly~a~t~G~vlavt~ 164 (354)
T KOG4649|consen 101 CDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCG-GGTFVSPVIAPGDGSLYAAITAGAVLAVTK 164 (354)
T ss_pred EcCCCceEEEecCCCcEEEecccccceEEecccC-CceeccceecCCCceEEEEeccceEEEEcc
Confidence 5678889999999999999999987776553221 111222345552223444444454444433
No 351
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.04 E-value=0.00015 Score=63.45 Aligned_cols=115 Identities=15% Similarity=0.214 Sum_probs=86.3
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEE---
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--- 149 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--- 149 (321)
..|.--+++..+++++.|+.-|.+++|+-..+....... +-...+..+.++++..+++.|+..|.|.++.++.+.+
T Consensus 34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~ 113 (726)
T KOG3621|consen 34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL 113 (726)
T ss_pred ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc
Confidence 344444566788999999999999999987775433222 2334456677888888888999999999998865322
Q ss_pred EEEE---eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC
Q 020798 150 LKVL---PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188 (321)
Q Consensus 150 ~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 188 (321)
+..- +.|...|++++|++++..+++|...|.|.+-.+..
T Consensus 114 ~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 114 DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 1111 23678899999999999999999999998877765
No 352
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.97 E-value=1.3e-05 Score=60.50 Aligned_cols=144 Identities=16% Similarity=0.186 Sum_probs=86.5
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC-CcEEEEEeccCCceeEEEe
Q 020798 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST-GKILKTYTGHTNSKYCISS 250 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~ 250 (321)
+...+.+|.++-++++..+........+... ......+..+++|+.+|.|.+|...- +.....+........+ .
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~--~ 107 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDL--G 107 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchHHHhhhccccccee--c
Confidence 4455677777777766433211110001111 12223455688999999999998652 1111111111111111 1
Q ss_pred EEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC-CCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT-DPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.....++.+..++++||.||.|++...+.+.....|. .++..+..+..++.++.+-...|..++.|++++
T Consensus 108 Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 108 IPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred cccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 1112345678899999999999999888877777777 677777777777888887222457899999875
No 353
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.97 E-value=7.6e-05 Score=64.42 Aligned_cols=94 Identities=17% Similarity=0.273 Sum_probs=76.2
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCee-EEEEccCCCEEEEEeCCCeEEEEeCCCCceeee
Q 020798 116 NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT-AVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194 (321)
Q Consensus 116 ~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 194 (321)
..+..+.|+|.-..+|.+..+|.+-+..+. -+.+.+++.|..+++ +++|.|||+.+++|-.||+|++.|..++..+..
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 446778999999999999999999998887 566777887777777 999999999999999999999999998876655
Q ss_pred eccCCCCCeEEEEEcc
Q 020798 195 LIDDENPPVSFVKFSP 210 (321)
Q Consensus 195 ~~~~~~~~~~~~~~~~ 210 (321)
........+..+.|++
T Consensus 100 ~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 100 FLFSVETDISKGIWDR 115 (665)
T ss_pred cccccccchheeeccc
Confidence 3333344566677764
No 354
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.93 E-value=0.0061 Score=48.14 Aligned_cols=187 Identities=17% Similarity=0.241 Sum_probs=104.1
Q ss_pred EECCCCCEEEEEeCC-----CcEEEEecCCc-ceeeeeecCcccEEEEEECCCCCEEEEeeCC-----------------
Q 020798 80 VFSSDSRFLVSASDD-----KTIRLWDVPTA-TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD----------------- 136 (321)
Q Consensus 80 ~~~~~~~~l~~~~~d-----~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------- 136 (321)
.|||||++|++.-+| |.|-|||.+.+ +.+..+..|.-....+.+.+||+.++.+...
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsM 199 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSM 199 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhc
Confidence 589999999876444 57999998743 3344566677677788999999988876431
Q ss_pred -CcEEEEecCCCEEEEE--Ee--CCCCCeeEEEEccCCCEEEEEeCCCeEE-----EEeCCCCceeeeeccC------CC
Q 020798 137 -ETVRIWDVKTGKCLKV--LP--AHSDPVTAVDFNRDGTMIVTSSYDGLCR-----IWDASTGHCMKTLIDD------EN 200 (321)
Q Consensus 137 -g~i~~wd~~~~~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~-----~~d~~~~~~~~~~~~~------~~ 200 (321)
-.+.+.|..+++.+.+ ++ .+.-.+..++..++|+..+.+-+.|--. +=-...++.+.-+... ..
T Consensus 200 ePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~a 279 (366)
T COG3490 200 EPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFA 279 (366)
T ss_pred CccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHH
Confidence 1122223333433322 22 2334567778888887766665444210 0001112211111100 01
Q ss_pred CCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEE
Q 020798 201 PPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 201 ~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd 273 (321)
..+-+++.+.+..+++..+ ..+..-+||..++..+..-.-.... .+. ....-++..+.+|.+.++.
T Consensus 280 nYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~daa--Gva-----~~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 280 NYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPDAA--GVA-----AAKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred hhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecccccccc--cce-----eccCceEEecCCceEEecc
Confidence 2355677776555665555 4557889999999877654322111 111 1223355567778888774
No 355
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.91 E-value=0.0081 Score=48.95 Aligned_cols=228 Identities=20% Similarity=0.288 Sum_probs=123.2
Q ss_pred CCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeee--
Q 020798 33 HDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKT-- 110 (321)
Q Consensus 33 ~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-- 110 (321)
..++.|+.|.++| +.+|+... +..+.... +...|..+...++-+.|++- .|+.+.++++........
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~-------~~~~~~i~--~~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~ 73 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSD-------PSKPTRIL--KLSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSA 73 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecC-------CccceeEe--ecceEEEEEEecccCEEEEE-cCCccEEEEchhhccccccc
Confidence 4578899998888 77887621 11111111 12338999999887766554 459999999865433221
Q ss_pred ------------eecCcccEEEEE--ECCCCCEEEEeeCCCcEEEEecCCC-----EEEEEEeCCCCCeeEEEEccCCCE
Q 020798 111 ------------LIGHTNYVFCVN--FNPQSNMIVSGAFDETVRIWDVKTG-----KCLKVLPAHSDPVTAVDFNRDGTM 171 (321)
Q Consensus 111 ------------~~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~~wd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~ 171 (321)
.......+...+ -.+.+...++......|.+|..... +..+.+.. ...+.+++|. ++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~--~~~ 150 (275)
T PF00780_consen 74 PLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFL--GNK 150 (275)
T ss_pred cccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEe--CCE
Confidence 111122333333 2233444444445568888877543 34444443 3677889998 456
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeeccC-----------CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEE--EE
Q 020798 172 IVTSSYDGLCRIWDASTGHCMKTLIDD-----------ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK--TY 238 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~--~~ 238 (321)
++.+..++ ..+.|+.++....-.... ...++..+.. +++.+|++. +..-.+.|. .|+..+ .+
T Consensus 151 i~v~~~~~-f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i 225 (275)
T PF00780_consen 151 ICVGTSKG-FYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVNK-NGEPSRKSTI 225 (275)
T ss_pred EEEEeCCc-eEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEcC-CCCcCcccEE
Confidence 77776554 678888865432221111 1112333333 345555542 333334443 343332 23
Q ss_pred eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCC
Q 020798 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH 286 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h 286 (321)
.....+ . ...+ ...+|++-.. +.|.||++.++++++.+...
T Consensus 226 ~W~~~p-~--~~~~---~~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~ 266 (275)
T PF00780_consen 226 QWSSAP-Q--SVAY---SSPYLIAFSS-NSIEVRSLETGELVQTIPLP 266 (275)
T ss_pred EcCCch-h--EEEE---ECCEEEEECC-CEEEEEECcCCcEEEEEECC
Confidence 222222 1 1222 2346666555 55999999999998887754
No 356
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.91 E-value=0.012 Score=51.03 Aligned_cols=242 Identities=17% Similarity=0.203 Sum_probs=124.2
Q ss_pred cEEEEEECCCCCEEEEE-eCCC----cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCC-----------c
Q 020798 75 GVSDLVFSSDSRFLVSA-SDDK----TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE-----------T 138 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~-~~d~----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------~ 138 (321)
.+....++|+++++|.+ +..| .++++|+.+++.+....... ....+.|.++++.|+....+. .
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 34467899999988855 3334 49999999997654322111 122389999988776554332 3
Q ss_pred EEEEecCCCEE--EEEEeCCCCC--eeEEEEccCCCEEEEEeC---C-CeEEEEeCCCC----ceeeeeccCCCCCeEEE
Q 020798 139 VRIWDVKTGKC--LKVLPAHSDP--VTAVDFNRDGTMIVTSSY---D-GLCRIWDASTG----HCMKTLIDDENPPVSFV 206 (321)
Q Consensus 139 i~~wd~~~~~~--~~~~~~~~~~--v~~~~~~~~~~~l~~~~~---d-g~i~~~d~~~~----~~~~~~~~~~~~~~~~~ 206 (321)
|+.|.+.+... ...+...... ...+..++++++++.... + ..+.+.|+..+ .....+..........+
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v 283 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYV 283 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEE
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEE
Confidence 77788765532 2333333333 467888999998765432 2 35777888764 22233322222222223
Q ss_pred EEccCCCEEEEEe---cCCeEEEEeCCCCc---EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC--eEEEEEcccce
Q 020798 207 KFSPNGKFILVGT---LDNTLRLWNYSTGK---ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS--CVYLWELQSRK 278 (321)
Q Consensus 207 ~~~~~g~~l~~~~---~d~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~ 278 (321)
.. ..+.+++... ..+.|.-.++.+.. ....+..+..... +.. +....+.+++.-..++ .|+++++..+.
T Consensus 284 ~~-~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~-l~~-~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~ 360 (414)
T PF02897_consen 284 DH-HGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVS-LED-VSLFKDYLVLSYRENGSSRLRVYDLDDGK 360 (414)
T ss_dssp EE-ETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEE-EEE-EEEETTEEEEEEEETTEEEEEEEETT-TE
T ss_pred Ec-cCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCcee-EEE-EEEECCEEEEEEEECCccEEEEEECCCCc
Confidence 22 3444444433 23567777777654 2223333333221 211 1122445555555554 58889988333
Q ss_pred EEEEecC-CCCCeEEEEecCCCce--EEEEeecCCccEEEccccc
Q 020798 279 VVQKLEG-HTDPVISVASHPTENI--IASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 279 ~~~~~~~-h~~~v~~~~~~p~~~~--l~s~~~d~~~~i~iw~~~~ 320 (321)
....+.. -.+.|..+...++++. +...|.-...+|.-||++.
T Consensus 361 ~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t 405 (414)
T PF02897_consen 361 ESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLAT 405 (414)
T ss_dssp EEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTT
T ss_pred EEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 3333332 2344666665555543 3333443445666666543
No 357
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.90 E-value=0.012 Score=50.74 Aligned_cols=240 Identities=16% Similarity=0.195 Sum_probs=115.8
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe-c
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD-V 102 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd-~ 102 (321)
+.+-++.|+.+.+ |+.-..||.+++|++.+.. .-. .........-....+....+..+|-.+++ .++.+.+.+ .
T Consensus 81 ~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~G~~-~fs-l~~~i~~~~v~e~~i~~~~~~~~GivvLt--~~~~~~~v~n~ 155 (410)
T PF04841_consen 81 GRIVGMGWTDDEE-LVVVQSDGTVRVYDLFGEF-QFS-LGEEIEEEKVLECRIFAIWFYKNGIVVLT--GNNRFYVVNNI 155 (410)
T ss_pred CCEEEEEECCCCe-EEEEEcCCEEEEEeCCCce-eec-hhhhccccCcccccccccccCCCCEEEEC--CCCeEEEEeCc
Confidence 6788888987655 4455689999999885432 000 01111111112222333344445533333 334443332 2
Q ss_pred CCcceeee---eec-------CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 103 PTATCLKT---LIG-------HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 103 ~~~~~~~~---~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
......+. ... +........++.+....+....++.+.+.+-...+. +. ..+++..++.+|+++++
T Consensus 156 ~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~-~~~~i~~iavSpng~~i 231 (410)
T PF04841_consen 156 DEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---ID-SDGPIIKIAVSPNGKFI 231 (410)
T ss_pred cccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---cc-CCCCeEEEEECCCCCEE
Confidence 11100010 000 000000012333444444444445555443222111 21 24689999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+.-..+|.+.+....-.+....+..........+.|+-+...++. - ...+.++...... +. +
T Consensus 232 Al~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~-~-~~~l~lvg~~~~~--------------~~--~ 293 (410)
T PF04841_consen 232 ALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLS-W-EDELLLVGPDGDS--------------IS--F 293 (410)
T ss_pred EEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEE-e-CCEEEEECCCCCc--------------eE--E
Confidence 999999999888765544444443333334556777655432222 1 3344444321111 11 1
Q ss_pred EecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEE
Q 020798 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS 292 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 292 (321)
. .++..++..--|| +||+.-..-+.++++......|..
T Consensus 294 ~-~~~~~~l~~E~DG-~riit~~~~~~l~~Vp~~~~~if~ 331 (410)
T PF04841_consen 294 W-YDGPVILVSEIDG-VRIITSTSHEFLQRVPDSTENIFR 331 (410)
T ss_pred e-ccCceEEeccCCc-eEEEeCCceEEEEECCHHHHHHhc
Confidence 1 1233445555566 788876666666666544433433
No 358
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.87 E-value=0.011 Score=49.37 Aligned_cols=224 Identities=19% Similarity=0.196 Sum_probs=104.2
Q ss_pred EECCCCCEEEEEe-CCC--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC
Q 020798 80 VFSSDSRFLVSAS-DDK--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH 156 (321)
Q Consensus 80 ~~~~~~~~l~~~~-~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 156 (321)
+|.++|+.|+.++ .|| .+.+.|+.+++..+-..+.........++|+.+.++.......++..|+++.+....+...
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence 5678887665444 455 5667788888754332222222224567788888766655678888999988766655555
Q ss_pred CCCeeEEEEc--cCCCEEEEEe---CC-------------------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC
Q 020798 157 SDPVTAVDFN--RDGTMIVTSS---YD-------------------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG 212 (321)
Q Consensus 157 ~~~v~~~~~~--~~~~~l~~~~---~d-------------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g 212 (321)
..-+....|. .+++.++-.- .+ ..|.-.|+.+++....+ ....-+..+.|+|..
T Consensus 122 ~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~--~~~~wlgH~~fsP~d 199 (386)
T PF14583_consen 122 DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVF--EDTDWLGHVQFSPTD 199 (386)
T ss_dssp TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEE--EESS-EEEEEEETTE
T ss_pred cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEE--ecCccccCcccCCCC
Confidence 5555445553 4455543321 11 12344456665532222 223446678899976
Q ss_pred CEEEEEecCC-----eEEEEeCC-CCcEEEEEeccCCceeEEEeEEEecCCeEEEE-----eCCCCeEEEEEcccceEEE
Q 020798 213 KFILVGTLDN-----TLRLWNYS-TGKILKTYTGHTNSKYCISSTFSVTNGKYIVS-----GSEDSCVYLWELQSRKVVQ 281 (321)
Q Consensus 213 ~~l~~~~~d~-----~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~dg~i~vwd~~~~~~~~ 281 (321)
..+++-+..| .-|||-+. .+.....+..+.. .-.+.--|+.+||..+.- ++.+..|.-+|..+++...
T Consensus 200 p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~-~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~ 278 (386)
T PF14583_consen 200 PTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRME-GESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRR 278 (386)
T ss_dssp EEEEEEEE-S-TTTSS-SEEEEETTS---EESS---T-TEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEE
T ss_pred CCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCC-CcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceE
Confidence 6666654333 12555443 2333333333332 223334455677765442 3345567778887765432
Q ss_pred EecCCCCCeEEEEecCCCceEEEEeec
Q 020798 282 KLEGHTDPVISVASHPTENIIASGALD 308 (321)
Q Consensus 282 ~~~~h~~~v~~~~~~p~~~~l~s~~~d 308 (321)
... ..+-.-+..++||+++|.=+.|
T Consensus 279 ~~~--~p~~~H~~ss~Dg~L~vGDG~d 303 (386)
T PF14583_consen 279 LME--MPWCSHFMSSPDGKLFVGDGGD 303 (386)
T ss_dssp EEE--E-SEEEEEE-TTSSEEEEEE--
T ss_pred EEe--CCceeeeEEcCCCCEEEecCCC
Confidence 111 1233456678999988765543
No 359
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.84 E-value=0.017 Score=50.21 Aligned_cols=242 Identities=17% Similarity=0.191 Sum_probs=118.6
Q ss_pred cEEEEEECCCCCEEEEe-----cCCceEEEeeccccCCCCCCCCCccc-ccccccccEEEEEECCCCCEEEEEeCCC---
Q 020798 25 AISSVKFSHDGRLLASS-----SADKTLLTYSLSSISNSDSTPPSPLQ-KFTGHEQGVSDLVFSSDSRFLVSASDDK--- 95 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~-----~~d~~v~~~~~~~~~~~~~~~~~~~~-~~~~h~~~i~~~~~~~~~~~l~~~~~d~--- 95 (321)
.+...++||+|+++|.+ +....+++.|+.... .+. .+.. .....+.|.++++.|+....+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~--------~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~ 194 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGK--------FLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQR 194 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTE--------EEEEEEEE--EESEEEEECTTSSEEEEEECSTTTS
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCc--------CcCCcccc--cccceEEEeCCCCEEEEEEeCcccc
Confidence 44467899999998854 333458888875421 111 1111 1112399999988776554333
Q ss_pred --------cEEEEecCCccee--eeeecCc-cc-EEEEEECCCCCEEEEee---CC-CcEEEEecCCC----EEEEEEeC
Q 020798 96 --------TIRLWDVPTATCL--KTLIGHT-NY-VFCVNFNPQSNMIVSGA---FD-ETVRIWDVKTG----KCLKVLPA 155 (321)
Q Consensus 96 --------~i~iwd~~~~~~~--~~~~~~~-~~-v~~~~~~~~~~~l~~~~---~d-g~i~~wd~~~~----~~~~~~~~ 155 (321)
.|+.|.+.+.... ..+.... .. ...+..++++++++... .+ ..+++.|+..+ .....+..
T Consensus 195 ~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~ 274 (414)
T PF02897_consen 195 TSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSP 274 (414)
T ss_dssp S-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEE
T ss_pred cccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeC
Confidence 3777888766432 2222222 22 56788899999876432 22 35778888764 22233322
Q ss_pred CCCCe-eEEEEccCCCEEEEEe---CCCeEEEEeCCCCce--eeeeccCCCCCeEEEEEccCCCEEEEEe-cCC--eEEE
Q 020798 156 HSDPV-TAVDFNRDGTMIVTSS---YDGLCRIWDASTGHC--MKTLIDDENPPVSFVKFSPNGKFILVGT-LDN--TLRL 226 (321)
Q Consensus 156 ~~~~v-~~~~~~~~~~~l~~~~---~dg~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~--~i~i 226 (321)
....+ ..+... .+.+++... .++.|.-.++..... .......+...+....+...+.+|+... .++ .|++
T Consensus 275 ~~~~~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v 353 (414)
T PF02897_consen 275 REDGVEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRV 353 (414)
T ss_dssp SSSS-EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCCceEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEE
Confidence 33333 334333 444444443 245666667765542 1212223333333334444555665544 343 6899
Q ss_pred EeCCCCcEEEEEeccCCceeEEEeEEEec-CCeEEEEe---CCCCeEEEEEcccceE
Q 020798 227 WNYSTGKILKTYTGHTNSKYCISSTFSVT-NGKYIVSG---SEDSCVYLWELQSRKV 279 (321)
Q Consensus 227 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~---~~dg~i~vwd~~~~~~ 279 (321)
+++..+............. +...-... ...+.+.- ...+++..||+.+++.
T Consensus 354 ~~~~~~~~~~~~~~p~~g~--v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 354 YDLDDGKESREIPLPEAGS--VSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp EETT-TEEEEEEESSSSSE--EEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred EECCCCcEEeeecCCcceE--EeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 9988344444443322221 11111111 22232222 2345677788877654
No 360
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.82 E-value=0.0033 Score=56.54 Aligned_cols=148 Identities=13% Similarity=0.159 Sum_probs=82.8
Q ss_pred ccEEEEEECCCCCEEEEec------CCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC---
Q 020798 24 RAISSVKFSHDGRLLASSS------ADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD--- 94 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d--- 94 (321)
..+...+++|+|+.+|... .|..-.+|-... . ....++ ..+ .....-.|+|+|+.|.+....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~----g-g~~~~l--t~g--~~~t~PsWspDG~~lw~v~dg~~~ 420 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL----G-GVAVQV--LEG--HSLTRPSWSLDADAVWVVVDGNTV 420 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC----C-Ccceee--ecC--CCCCCceECCCCCceEEEecCcce
Confidence 4677889999999887654 244334443211 0 011111 122 136678899998877766432
Q ss_pred ---------CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEE---EecCCCEEEE----EE-eCCC
Q 020798 95 ---------KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI---WDVKTGKCLK----VL-PAHS 157 (321)
Q Consensus 95 ---------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~---wd~~~~~~~~----~~-~~~~ 157 (321)
+.+.+.+++.+.... .....|..+.|+|||..++... ++.|++ -....|.... .+ ..-.
T Consensus 421 ~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~ 496 (591)
T PRK13616 421 VRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLG 496 (591)
T ss_pred EEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccC
Confidence 233333443333211 2345699999999999887655 467766 4434443111 12 2223
Q ss_pred CCeeEEEEccCCCEEEEEeCCCeEEEEe
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWD 185 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d 185 (321)
..+.++.|.+++.++ ++..++.-.+|.
T Consensus 497 ~~~~~l~W~~~~~L~-V~~~~~~~~v~~ 523 (591)
T PRK13616 497 DTAVSLDWRTGDSLV-VGRSDPEHPVWY 523 (591)
T ss_pred CccccceEecCCEEE-EEecCCCCceEE
Confidence 346889999998854 444444334443
No 361
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.013 Score=48.17 Aligned_cols=216 Identities=16% Similarity=0.163 Sum_probs=118.5
Q ss_pred EECCCCC-EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC---
Q 020798 80 VFSSDSR-FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA--- 155 (321)
Q Consensus 80 ~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--- 155 (321)
.|.++.. ++.+--..+.|.-|+..+++. ..+. +...+.++..-..+..|+++.. -+.+++.+++..+..+..
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~-~~~~-~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~ 106 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGKK-RVFP-SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPED 106 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCce-EEEE-CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccC
Confidence 4666665 445556677888888876642 2222 2333344444444455655543 345666655554222211
Q ss_pred --CCCCeeEEEEccCCCEEEEEeC-----------CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-C
Q 020798 156 --HSDPVTAVDFNRDGTMIVTSSY-----------DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-D 221 (321)
Q Consensus 156 --~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d 221 (321)
.....+.....|+|.+.++... -|.++-+|. .+...+ +....-...+.++|+||++.+..+.. .
T Consensus 107 ~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~-l~~~~~~~~NGla~SpDg~tly~aDT~~ 184 (307)
T COG3386 107 GLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVR-LLDDDLTIPNGLAFSPDGKTLYVADTPA 184 (307)
T ss_pred CCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEE-eecCcEEecCceEECCCCCEEEEEeCCC
Confidence 1134567788888886654333 133444443 333332 22222233467999999988877755 4
Q ss_pred CeEEEEeCCC--Cc----E-EEEEeccCCceeEEEeEEEecCCeEEEEeCCCC-eEEEEEcccceEEEEecCCCCCeEEE
Q 020798 222 NTLRLWNYST--GK----I-LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS-CVYLWELQSRKVVQKLEGHTDPVISV 293 (321)
Q Consensus 222 ~~i~i~d~~~--~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~ 293 (321)
+.|.-|++.. +. . ........+.. .......+|.+.+++..+| .|.+|+.. ++++..+.-+...+.++
T Consensus 185 ~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~P---DG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~ 260 (307)
T COG3386 185 NRIHRYDLDPATGPIGGRRGFVDFDEEPGLP---DGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNP 260 (307)
T ss_pred CeEEEEecCcccCccCCcceEEEccCCCCCC---CceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccc
Confidence 7888887652 11 1 11111111111 1111224566665555554 89999987 88888888776778888
Q ss_pred EecC-CCc-eEEEE
Q 020798 294 ASHP-TEN-IIASG 305 (321)
Q Consensus 294 ~~~p-~~~-~l~s~ 305 (321)
+|-- +.+ +++++
T Consensus 261 ~FgG~~~~~L~iTs 274 (307)
T COG3386 261 AFGGPDLNTLYITS 274 (307)
T ss_pred eEeCCCcCEEEEEe
Confidence 8853 334 44443
No 362
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.81 E-value=7.7e-05 Score=39.71 Aligned_cols=37 Identities=46% Similarity=0.682 Sum_probs=32.6
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEee
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYS 51 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~ 51 (321)
....+..|...|.++.|+|+++++++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3455678999999999999999999999999999984
No 363
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.79 E-value=0.03 Score=51.77 Aligned_cols=280 Identities=18% Similarity=0.203 Sum_probs=146.1
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
++.|.-..|--|+.+|+++..||.+.-|-+.........+ +...--..++.--.|+..++.-+.+..|+-..+|.-
T Consensus 583 PRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~----Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~ 658 (1096)
T KOG1897|consen 583 PRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDR----KKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSS 658 (1096)
T ss_pred chheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccc----cccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEec
Confidence 4566667777778999999999999877554322111110 000011233443445544433333445555555543
Q ss_pred CCcceeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCCE--EEEEEeCCCCCeeEEEEccCCCEEEEEeCC
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTGK--CLKVLPAHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
...-+...+. ....-.-+.|+.+ +..++++.. +.+++..+..-+ -+++++.+. ....+++.+....+.+.+..
T Consensus 659 n~kLv~spls-~kev~~~c~f~s~a~~d~l~~~~~-~~l~i~tid~iqkl~irtvpl~~-~prrI~~q~~sl~~~v~s~r 735 (1096)
T KOG1897|consen 659 NGKLVYSPLS-LKEVNHMCPFNSDAYPDSLASANG-GALTIGTIDEIQKLHIRTVPLGE-SPRRICYQESSLTFGVLSNR 735 (1096)
T ss_pred CCcEEEeccc-hHHhhhhcccccccCCceEEEecC-CceEEEEecchhhcceeeecCCC-ChhheEecccceEEEEEecc
Confidence 3221111110 1111111223322 234555543 445555443221 123344443 34567777644444443321
Q ss_pred --------------CeEEEEeCCCCceeeeeccCCC---CCeEEEEEccC-CCEEEEEec----------CCeEEEEeCC
Q 020798 179 --------------GLCRIWDASTGHCMKTLIDDEN---PPVSFVKFSPN-GKFILVGTL----------DNTLRLWNYS 230 (321)
Q Consensus 179 --------------g~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~-g~~l~~~~~----------d~~i~i~d~~ 230 (321)
..++++|-.+.+.......... ..+..+.|..| +.++++|+. .|.|.+|...
T Consensus 736 ~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~ 815 (1096)
T KOG1897|consen 736 IESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFE 815 (1096)
T ss_pred cccchhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEe
Confidence 1356677666544333221111 12444557766 777777752 3678888876
Q ss_pred CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCC
Q 020798 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND 310 (321)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~ 310 (321)
.++.++....+.-...+.+... -+|+++|+ -...|++|+..+.+.++.-..|..++..+...-.++.++.|- --
T Consensus 816 e~~~L~~v~e~~v~Gav~aL~~--fngkllA~--In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgD--lm 889 (1096)
T KOG1897|consen 816 ELNSLELVAETVVKGAVYALVE--FNGKLLAG--INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGD--LM 889 (1096)
T ss_pred cCCceeeeeeeeeccceeehhh--hCCeEEEe--cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEee--cc
Confidence 6444444433322222222222 36777764 456899999988877777778888999998888899999874 23
Q ss_pred ccEEE
Q 020798 311 RTVKI 315 (321)
Q Consensus 311 ~~i~i 315 (321)
++|.+
T Consensus 890 ~Sitl 894 (1096)
T KOG1897|consen 890 RSITL 894 (1096)
T ss_pred ceEEE
Confidence 44444
No 364
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.78 E-value=0.00019 Score=62.07 Aligned_cols=94 Identities=14% Similarity=0.227 Sum_probs=75.1
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEE-EEEECCCCCEEEEeeCCCcEEEEecCCCEEEE
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF-CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 151 (321)
...|..+.|+|.-..+|++..+|.+.+..+. .+.+..+.-|+..+. +++|.|||+.|+.|-.||+|++.|+.++..+.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 3467889999999999999999999888877 444566665666666 99999999999999999999999999887665
Q ss_pred EE-eCCCCCeeEEEEcc
Q 020798 152 VL-PAHSDPVTAVDFNR 167 (321)
Q Consensus 152 ~~-~~~~~~v~~~~~~~ 167 (321)
.. .....+|..+-|.|
T Consensus 99 ~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 99 SFLFSVETDISKGIWDR 115 (665)
T ss_pred ccccccccchheeeccc
Confidence 52 23345677777764
No 365
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.78 E-value=0.0015 Score=59.81 Aligned_cols=143 Identities=17% Similarity=0.238 Sum_probs=96.5
Q ss_pred CCCEEEEE-eCCCcEEEEecCCcceeeeeecCccc-EEEEEECC-----CCCEEEEeeCCCcEEEEecCCCE--EEEE-E
Q 020798 84 DSRFLVSA-SDDKTIRLWDVPTATCLKTLIGHTNY-VFCVNFNP-----QSNMIVSGAFDETVRIWDVKTGK--CLKV-L 153 (321)
Q Consensus 84 ~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~-----~~~~l~~~~~dg~i~~wd~~~~~--~~~~-~ 153 (321)
+.++|+.. .....|+-.|++.++.+..+..+... |..++-.. .....+.|-.+..+..||.|-.. ++.. .
T Consensus 492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~ 571 (794)
T PF08553_consen 492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS 571 (794)
T ss_pred ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence 33444433 34577889999999998888777654 54443221 13455667778899999987532 2211 1
Q ss_pred --eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 154 --PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 154 --~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
-......++++-+.+| ++++|+.+|.||+||- .+...++.+..-+.+|..+..+.||+|+++.+ +..|.+++.
T Consensus 572 k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 572 KQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred cccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 1223456667666555 7899999999999994 44445555656678899999999999987655 556777774
No 366
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.78 E-value=0.00091 Score=61.16 Aligned_cols=135 Identities=19% Similarity=0.250 Sum_probs=87.1
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC-------CCEEEEEecCCeEEEEeCCCC--cEEEEEeccC-Cce
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN-------GKFILVGTLDNTLRLWNYSTG--KILKTYTGHT-NSK 245 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~-~~~ 245 (321)
.....++-.|+..|+.+..+......++.. +.|+ ..-.++|-.++.+..||.+-. +++.. ..+. ...
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~--~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~-~~k~Y~~~ 577 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVD--IAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS-QSKQYSSK 577 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeE--ecccccccccCCCceEEEECCCceEEeccCCCCCceeec-cccccccC
Confidence 345778899999999998886655444433 3342 233567788889999998753 23321 1111 111
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEE-EEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV-QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
.-.++... ....+||.|+.+|.||+||- .++.. ..+.+...||.+|..+.||+++++.+ +..+.|++.
T Consensus 578 ~~Fs~~aT-t~~G~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc---~tyLlLi~t 646 (794)
T PF08553_consen 578 NNFSCFAT-TEDGYIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATC---KTYLLLIDT 646 (794)
T ss_pred CCceEEEe-cCCceEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEee---cceEEEEEE
Confidence 11222233 34557999999999999994 33322 34567789999999999999987765 234555553
No 367
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.78 E-value=0.016 Score=52.30 Aligned_cols=147 Identities=11% Similarity=0.182 Sum_probs=82.9
Q ss_pred ccEEEEEECCCCCEEEEEe------CCC--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC---------
Q 020798 74 QGVSDLVFSSDSRFLVSAS------DDK--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD--------- 136 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~------~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------- 136 (321)
..+.+.+++|+|+.++... .|. .|.+++.... ......+ .....-.|+|+|+.+++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~-~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV-AVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc-ceeeecC--CCCCCceECCCCCceEEEecCcceEEEecc
Confidence 4678899999999887654 244 4444454222 2111222 236677899998877665432
Q ss_pred ---CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEE---EeCCCCcee----eeeccCCCCCeEEE
Q 020798 137 ---ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI---WDASTGHCM----KTLIDDENPPVSFV 206 (321)
Q Consensus 137 ---g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~---~d~~~~~~~----~~~~~~~~~~~~~~ 206 (321)
+.+.+.++..++... .....|..+.|+|||..++... ++.+.+ -....+... ..+.......+..+
T Consensus 427 ~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l 502 (591)
T PRK13616 427 PATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSL 502 (591)
T ss_pred CCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccc
Confidence 233333443333222 2245799999999999887665 466666 333344311 11212222234678
Q ss_pred EEccCCCEEEEEecCCeEEEEe
Q 020798 207 KFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 207 ~~~~~g~~l~~~~~d~~i~i~d 228 (321)
.|..++.++ ++..++.-.+|.
T Consensus 503 ~W~~~~~L~-V~~~~~~~~v~~ 523 (591)
T PRK13616 503 DWRTGDSLV-VGRSDPEHPVWY 523 (591)
T ss_pred eEecCCEEE-EEecCCCCceEE
Confidence 899998855 555444444444
No 368
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=97.74 E-value=0.013 Score=52.74 Aligned_cols=227 Identities=17% Similarity=0.218 Sum_probs=115.2
Q ss_pred CCCEEEEEeCCC------cEEEEecCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCC-C-----cEEEEecCCCEEE
Q 020798 84 DSRFLVSASDDK------TIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFD-E-----TVRIWDVKTGKCL 150 (321)
Q Consensus 84 ~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-g-----~i~~wd~~~~~~~ 150 (321)
.+..++.|+.++ .+..||..++....... .....-.+++.. ++..+++||.+ | .+..||.+.++=.
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~ 362 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT 362 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence 455667777663 57788887764322111 011112233333 34677888888 2 4667787766522
Q ss_pred E--EEeCCCCCeeEEEEccCCCEEEEEeCCCe-----EEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC-
Q 020798 151 K--VLPAHSDPVTAVDFNRDGTMIVTSSYDGL-----CRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN- 222 (321)
Q Consensus 151 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~- 222 (321)
. .+........ ++ .-+|...++|+.||. +-.||..+.+-....... ...-......-+|...++|+.++
T Consensus 363 ~~a~M~~~R~~~~-v~-~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~-~~r~~~gv~~~~g~iYi~GG~~~~ 439 (571)
T KOG4441|consen 363 PVAPMNTKRSDFG-VA-VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPML-TRRSGHGVAVLGGKLYIIGGGDGS 439 (571)
T ss_pred ccCCccCccccce-eE-EECCEEEEEeccccccccccEEEecCCCCcccccCCCC-cceeeeEEEEECCEEEEEcCcCCC
Confidence 1 1111111111 11 125777888888864 566777654321111000 11111122233677778887553
Q ss_pred -----eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCe-----EEEEEcccceE--EEEecCCCCCe
Q 020798 223 -----TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSC-----VYLWELQSRKV--VQKLEGHTDPV 290 (321)
Q Consensus 223 -----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-----i~vwd~~~~~~--~~~~~~h~~~v 290 (321)
++..||..+.+............ .... ..-++...+.|+.|+. |..||..+.+- +..+......+
T Consensus 440 ~~~l~sve~YDP~t~~W~~~~~M~~~R~-~~g~--a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~ 516 (571)
T KOG4441|consen 440 SNCLNSVECYDPETNTWTLIAPMNTRRS-GFGV--AVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAV 516 (571)
T ss_pred ccccceEEEEcCCCCceeecCCcccccc-cceE--EEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccc
Confidence 57888887765433222111111 1111 1246888888887763 67788766543 22233233333
Q ss_pred EEEEecCCCceEEEEeecCC---ccEEEcccc
Q 020798 291 ISVASHPTENIIASGALDND---RTVKIWTQE 319 (321)
Q Consensus 291 ~~~~~~p~~~~l~s~~~d~~---~~i~iw~~~ 319 (321)
-.++. ++...|.|+.|+. ++|..||.+
T Consensus 517 g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~ 546 (571)
T KOG4441|consen 517 GVVVL--GGKLYAVGGFDGNNNLNTVECYDPE 546 (571)
T ss_pred cEEEE--CCEEEEEecccCccccceeEEcCCC
Confidence 33333 4677788876644 356667654
No 369
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.70 E-value=0.00022 Score=37.84 Aligned_cols=38 Identities=42% Similarity=0.811 Sum_probs=33.0
Q ss_pred EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEe
Q 020798 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWD 185 (321)
Q Consensus 148 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d 185 (321)
++...+..|...+.++.|++.+..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 44556677888999999999999999999999999996
No 370
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.68 E-value=0.018 Score=45.86 Aligned_cols=193 Identities=16% Similarity=0.233 Sum_probs=112.2
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
+...|-...|+++.|+|+.+.|.+..+...-.++--.+.+.... .|+ .+ -.....|.+..++++.++--.++.
T Consensus 79 kpi~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gdlirt---iPL---~g-~~DpE~Ieyig~n~fvi~dER~~~ 151 (316)
T COG3204 79 KPILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRT---IPL---TG-FSDPETIEYIGGNQFVIVDERDRA 151 (316)
T ss_pred cccccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEE---ecc---cc-cCChhHeEEecCCEEEEEehhcce
Confidence 33556667799999999999887776666555542211111111 111 11 122345778888888888788888
Q ss_pred EEEEecCCcceeeee---------ecC-cccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-EE--EEEeCC-------
Q 020798 97 IRLWDVPTATCLKTL---------IGH-TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-CL--KVLPAH------- 156 (321)
Q Consensus 97 i~iwd~~~~~~~~~~---------~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~--~~~~~~------- 156 (321)
+.++.+......... ..+ +...-.++|+|....|+.+-...-+.+|...... .. .....+
T Consensus 152 l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f 231 (316)
T COG3204 152 LYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLF 231 (316)
T ss_pred EEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceE
Confidence 888877655322111 122 4557789999999888888877777777654322 10 000111
Q ss_pred CCCeeEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeee--cc------CCCCCeEEEEEccCCCEEEE
Q 020798 157 SDPVTAVDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTL--ID------DENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 157 ~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~--~~------~~~~~~~~~~~~~~g~~l~~ 217 (321)
-..+.++.|++. +.+++.+.+++.+.-.|.... .+..+ .. ...+....++..++|...++
T Consensus 232 ~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~-~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIv 300 (316)
T COG3204 232 VLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGE-VIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIV 300 (316)
T ss_pred eeccccceecCCCCcEEEEecCCceEEEEecCCC-eeeeEEeccCCCCCcccCCCcceeEECCCCCEEEE
Confidence 134677888875 456666777777777776543 22221 11 11223455777777765444
No 371
>PHA02713 hypothetical protein; Provisional
Probab=97.67 E-value=0.014 Score=52.67 Aligned_cols=212 Identities=8% Similarity=0.120 Sum_probs=104.6
Q ss_pred cEEEEecCCcceee--eeecCcccEEEEEECCCCCEEEEeeCC------CcEEEEecCCCEEEE--EEeCCCCCeeEEEE
Q 020798 96 TIRLWDVPTATCLK--TLIGHTNYVFCVNFNPQSNMIVSGAFD------ETVRIWDVKTGKCLK--VLPAHSDPVTAVDF 165 (321)
Q Consensus 96 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~wd~~~~~~~~--~~~~~~~~v~~~~~ 165 (321)
.+..||..+.+... .+...... .+++. -++..++.||.+ ..+..||..+..-.. .++...... +++
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~- 348 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA- 348 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-
Confidence 46778877665321 11111111 12222 245566677643 246778877664221 111111111 122
Q ss_pred ccCCCEEEEEeCCC-----eEEEEeCCCCceee--eeccCCCCCeEEEEEccCCCEEEEEecC-----------------
Q 020798 166 NRDGTMIVTSSYDG-----LCRIWDASTGHCMK--TLIDDENPPVSFVKFSPNGKFILVGTLD----------------- 221 (321)
Q Consensus 166 ~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~d----------------- 221 (321)
.-++...+.|+.++ .+..||..+..-.. .+... ......+ .-+|+..+.|+.+
T Consensus 349 ~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~-r~~~~~~--~~~g~IYviGG~~~~~~~~~~~~~~~~~~~ 425 (557)
T PHA02713 349 VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIA-LSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDME 425 (557)
T ss_pred EECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcc-cccccEE--EECCEEEEEeCCCccccccccccccccccc
Confidence 23567777887654 47788887653221 11111 0111112 2367777777654
Q ss_pred ------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC------CeEEEEEccc-c--eEEEEecCC
Q 020798 222 ------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED------SCVYLWELQS-R--KVVQKLEGH 286 (321)
Q Consensus 222 ------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~-~--~~~~~~~~h 286 (321)
..+..||..+.+....-.-..... .. .....++...+.|+.+ ..+..||..+ . ..+..+...
T Consensus 426 ~~~~~~~~ve~YDP~td~W~~v~~m~~~r~-~~--~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~ 502 (557)
T PHA02713 426 EDTHSSNKVIRYDTVNNIWETLPNFWTGTI-RP--GVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESR 502 (557)
T ss_pred ccccccceEEEECCCCCeEeecCCCCcccc-cC--cEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcc
Confidence 247778877654332211111110 00 1112367777777654 2467888876 3 333444433
Q ss_pred CCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 287 TDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 287 ~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
......+++ ++.+.+.||.|+...+..||.+
T Consensus 503 r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~ 533 (557)
T PHA02713 503 LSALHTILH--DNTIMMLHCYESYMLQDTFNVY 533 (557)
T ss_pred cccceeEEE--CCEEEEEeeecceeehhhcCcc
Confidence 333333333 6889999997765577777765
No 372
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.62 E-value=0.0047 Score=41.64 Aligned_cols=100 Identities=16% Similarity=0.180 Sum_probs=62.0
Q ss_pred EEEEEECC---CC-CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 26 ISSVKFSH---DG-RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 26 v~~~~~s~---~g-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
|+++++.+ || +.|++|+.|..|++|+-.. .+..++. ...|..+.-... ..++.+..+|+|-+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e----------~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE----------IVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc----------EEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence 56666654 43 5899999999999995432 2333333 345677776665 5688899999999997
Q ss_pred cCCcceeeeeecCcccEEEEEEC-C--CC-CEEEEeeCCCcEE
Q 020798 102 VPTATCLKTLIGHTNYVFCVNFN-P--QS-NMIVSGAFDETVR 140 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~~~~~-~--~~-~~l~~~~~dg~i~ 140 (321)
-... +..++... .+.++.+. . +| ..|++|-.+|.|-
T Consensus 70 ~~~R--lWRiKSK~-~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 70 RSQR--LWRIKSKN-QVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred Ccce--eeeeccCC-CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 5322 22222222 24444433 2 33 3588888888763
No 373
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.62 E-value=0.021 Score=47.77 Aligned_cols=131 Identities=15% Similarity=0.154 Sum_probs=77.7
Q ss_pred CcEEEEecCCc----ceeeee--ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-EEEEEe-CCCCCeeEEEEc
Q 020798 95 KTIRLWDVPTA----TCLKTL--IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-CLKVLP-AHSDPVTAVDFN 166 (321)
Q Consensus 95 ~~i~iwd~~~~----~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~-~~~~~v~~~~~~ 166 (321)
|.|.++++... ..++.+ ....++|.+++.- +..|+++. .+.|++|++...+ ....-. .....+.++..
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~- 137 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV- 137 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE-
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEec-
Confidence 88999998873 112211 2346778887766 33444443 4789999998776 333221 12224555544
Q ss_pred cCCCEEEEEeCCCeEEEEeCCC-Cceeeeec-cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 167 RDGTMIVTSSYDGLCRIWDAST-GHCMKTLI-DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 167 ~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
.++++++|.....+.++..+. ...+..+. ......+..+.+-++++.++++..+|.+.++...
T Consensus 138 -~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 138 -FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp -ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred -cccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 466888898877777764332 22222222 2223346777777666788999999999999865
No 374
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.58 E-value=0.039 Score=47.17 Aligned_cols=81 Identities=11% Similarity=0.248 Sum_probs=52.8
Q ss_pred eEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC---------------CeEE-EEeCCC
Q 020798 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN---------------GKYI-VSGSED 266 (321)
Q Consensus 203 ~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l-~~~~~d 266 (321)
+..+..+|.+++.++...-|.|.++|+.++..++.+++...............+ ..+| +-+-.-
T Consensus 310 ~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprR 389 (415)
T PF14655_consen 310 GESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRR 389 (415)
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEeccC
Confidence 567889999998888877899999999999888877765433211100000000 1222 234567
Q ss_pred CeEEEEEcccceEEEEe
Q 020798 267 SCVYLWELQSRKVVQKL 283 (321)
Q Consensus 267 g~i~vwd~~~~~~~~~~ 283 (321)
|.|.||.++.+..+..+
T Consensus 390 g~lEvW~~~~g~Rv~a~ 406 (415)
T PF14655_consen 390 GILEVWSMRQGPRVAAF 406 (415)
T ss_pred CeEEEEecCCCCEEEEE
Confidence 88899999877665544
No 375
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.50 E-value=0.00087 Score=61.75 Aligned_cols=105 Identities=20% Similarity=0.296 Sum_probs=76.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeE
Q 020798 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247 (321)
Q Consensus 168 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 247 (321)
.+..++.|+..|.+-..|.+..-.....-.....++++++|+.+|+.++.|-.+|.|.+||+..+++++.+..+..+...
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 45567888888888888876532211222234578999999999999999999999999999999999988877766555
Q ss_pred EEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 248 ISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 248 ~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
+...-...++..++++..-|. +|.+
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 444433345556777777775 5654
No 376
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.50 E-value=0.013 Score=39.63 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=58.7
Q ss_pred CEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEE
Q 020798 128 NMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVK 207 (321)
Q Consensus 128 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 207 (321)
+.|++|+.|..|++|+- .+.+..+.. .+.++++.-... ..|+.+..+|+|-+|+-... .-+....+ .++....
T Consensus 16 ~eLlvGs~D~~IRvf~~--~e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R--lWRiKSK~-~~~~~~~ 88 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKG--DEIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQR--LWRIKSKN-QVTSMAF 88 (111)
T ss_pred ceEEEecCCcEEEEEeC--CcEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCcce--eeeeccCC-CeEEEEE
Confidence 57999999999999973 455666654 456777776655 56889999999999975321 22222222 2333333
Q ss_pred EccCC---CEEEEEecCCeEE
Q 020798 208 FSPNG---KFILVGTLDNTLR 225 (321)
Q Consensus 208 ~~~~g---~~l~~~~~d~~i~ 225 (321)
++.++ ..|++|-.+|.|-
T Consensus 89 ~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 89 YDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EcCCCCCceEEEEEecCCeEE
Confidence 44433 3577888888764
No 377
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.43 E-value=0.1 Score=48.46 Aligned_cols=284 Identities=14% Similarity=0.141 Sum_probs=133.1
Q ss_pred cccEEEEEECCCC------CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 23 LRAISSVKFSHDG------RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 23 ~~~v~~~~~s~~g------~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
...|.|+.++|-| +.++.|..+..+.+--...-..... ......+.-.+.|--..+-.|..+|.++..||.
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~---~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~ 606 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILIT---HEQLSGEIIPRSILLTTFEGDIHYLLVALGDGA 606 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceee---eeccCCCccchheeeEEeeccceEEEEEcCCce
Confidence 5689999999753 2688887766655432211000000 000011111234444455556789999999999
Q ss_pred EEEEecCCcceee--e---eecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC--
Q 020798 97 IRLWDVPTATCLK--T---LIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD-- 168 (321)
Q Consensus 97 i~iwd~~~~~~~~--~---~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~-- 168 (321)
+..|.+...+... . ..| ..++.--.|+..++ .+++++ |.-.-+|-- +++....--.-+.--.-+.|+.+
T Consensus 607 l~~fv~d~~tg~lsd~Kk~~lG-t~P~~Lr~f~sk~~t~vfa~s-drP~viY~~-n~kLv~spls~kev~~~c~f~s~a~ 683 (1096)
T KOG1897|consen 607 LLYFVLDINTGQLSDRKKVTLG-TQPISLRTFSSKSRTAVFALS-DRPTVIYSS-NGKLVYSPLSLKEVNHMCPFNSDAY 683 (1096)
T ss_pred EEEEEEEcccceEccccccccC-CCCcEEEEEeeCCceEEEEeC-CCCEEEEec-CCcEEEeccchHHhhhhcccccccC
Confidence 9887654433211 1 112 22333334444433 344444 444444432 23332211000000011222222
Q ss_pred CCEEEEEeCCCeEEEEeCCCCce--eeeeccCCCCCeEEEEEccCCCEEEEEec-----------C---CeEEEEeCCCC
Q 020798 169 GTMIVTSSYDGLCRIWDASTGHC--MKTLIDDENPPVSFVKFSPNGKFILVGTL-----------D---NTLRLWNYSTG 232 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-----------d---~~i~i~d~~~~ 232 (321)
...++.+.. +.+++.-+..-+. ++++ ........+++.+....+.+.+. . ..++++|-.+-
T Consensus 684 ~d~l~~~~~-~~l~i~tid~iqkl~irtv--pl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf 760 (1096)
T KOG1897|consen 684 PDSLASANG-GALTIGTIDEIQKLHIRTV--PLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTF 760 (1096)
T ss_pred CceEEEecC-CceEEEEecchhhcceeee--cCCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCce
Confidence 224444443 4455554432211 1221 12223344555553333333221 1 13677776666
Q ss_pred cEEEEEeccC--CceeEEEeEEEecCCeEEEEeC----------CCCeEEEEEcccceEEEEecCC--CCCeEEEEecCC
Q 020798 233 KILKTYTGHT--NSKYCISSTFSVTNGKYIVSGS----------EDSCVYLWELQSRKVVQKLEGH--TDPVISVASHPT 298 (321)
Q Consensus 233 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~p~ 298 (321)
+.+...+... ....++++.+..+.+.+++.|+ ..|.|.||.+...+.+..+..+ .+.+.++.- .+
T Consensus 761 ~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fn 839 (1096)
T KOG1897|consen 761 EVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FN 839 (1096)
T ss_pred eEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh-hC
Confidence 5554432211 1122333344444477777775 3588999998774433333322 456666643 35
Q ss_pred CceEEEEeecCCccEEEccccc
Q 020798 299 ENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 299 ~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
|++||.-+ ..|+||+..+
T Consensus 840 gkllA~In----~~vrLye~t~ 857 (1096)
T KOG1897|consen 840 GKLLAGIN----QSVRLYEWTT 857 (1096)
T ss_pred CeEEEecC----cEEEEEEccc
Confidence 77877643 4677776543
No 378
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.41 E-value=0.087 Score=47.18 Aligned_cols=162 Identities=18% Similarity=0.322 Sum_probs=94.1
Q ss_pred EEECCCCCEEEEeeC-----CC-----------cEEEEecCCCEEEEEEeCCCCC---------eeEEEEccCCC---EE
Q 020798 121 VNFNPQSNMIVSGAF-----DE-----------TVRIWDVKTGKCLKVLPAHSDP---------VTAVDFNRDGT---MI 172 (321)
Q Consensus 121 ~~~~~~~~~l~~~~~-----dg-----------~i~~wd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~---~l 172 (321)
+++.|+.+.++.+.. .+ .|.-.|+++|+..-.++..... ..-+.+..+|+ .+
T Consensus 239 ~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v 318 (527)
T TIGR03075 239 GSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLL 318 (527)
T ss_pred eeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEE
Confidence 466676666655431 12 4666688888876555432211 12233334665 67
Q ss_pred EEEeCCCeEEEEeCCCCceeee--------ec---c-CCCCCe----------------------------EEEEEccCC
Q 020798 173 VTSSYDGLCRIWDASTGHCMKT--------LI---D-DENPPV----------------------------SFVKFSPNG 212 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~--------~~---~-~~~~~~----------------------------~~~~~~~~g 212 (321)
+.+..+|.+.+.|.++++.+.. .. . ....++ ..++++|+.
T Consensus 319 ~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~ 398 (527)
T TIGR03075 319 AHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKT 398 (527)
T ss_pred EEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCC
Confidence 7889999999999998876421 10 0 000000 114566655
Q ss_pred CEEEEEecC---------------------------------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeE
Q 020798 213 KFILVGTLD---------------------------------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259 (321)
Q Consensus 213 ~~l~~~~~d---------------------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (321)
.++++...+ +.|.-+|+.+++.+-..+........ ... ..+.+
T Consensus 399 g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~---~l~-t~g~l 474 (527)
T TIGR03075 399 GLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGG---VLA-TAGDL 474 (527)
T ss_pred CEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCCCCc---ceE-ECCcE
Confidence 555443322 45777888888776655432211111 111 24556
Q ss_pred EEEeCCCCeEEEEEcccceEEEEecCC
Q 020798 260 IVSGSEDSCVYLWELQSRKVVQKLEGH 286 (321)
Q Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~h 286 (321)
++.++.+|.++.+|.++++.+.+.+-.
T Consensus 475 vf~g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 475 VFYGTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred EEEECCCCeEEEEECCCCCEeEEEeCC
Confidence 777888999999999999998877643
No 379
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.38 E-value=0.009 Score=51.21 Aligned_cols=143 Identities=20% Similarity=0.305 Sum_probs=95.2
Q ss_pred CCCCEEE-EEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCC-------EEEEeeCCCcEEEEecCCCE--EEEE
Q 020798 83 SDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-------MIVSGAFDETVRIWDVKTGK--CLKV 152 (321)
Q Consensus 83 ~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~i~~wd~~~~~--~~~~ 152 (321)
.+.++|+ .+.....++-.|++.++.+....-+.. |.-+.+.|+.. .-+.|-.+..|.-||.+-.. .+..
T Consensus 343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~ 421 (644)
T KOG2395|consen 343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV 421 (644)
T ss_pred cccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee
Confidence 3444444 455556788889999998888776666 66666777642 22345667888899987322 1222
Q ss_pred EeCC----CCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 153 LPAH----SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 153 ~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
.+.| .....|++-..+| ++++|+.+|.|++||- .+...++.+...+.+|..+..+.+|++|++.+ +..+.+.+
T Consensus 422 ~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~ 498 (644)
T KOG2395|consen 422 VQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLID 498 (644)
T ss_pred eeccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEE
Confidence 2222 2234445444444 7899999999999996 45445556666778899999999999987544 56677776
Q ss_pred C
Q 020798 229 Y 229 (321)
Q Consensus 229 ~ 229 (321)
+
T Consensus 499 t 499 (644)
T KOG2395|consen 499 T 499 (644)
T ss_pred E
Confidence 5
No 380
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.35 E-value=0.052 Score=43.34 Aligned_cols=192 Identities=13% Similarity=0.240 Sum_probs=117.0
Q ss_pred ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCC-CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCc
Q 020798 112 IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS-DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH 190 (321)
Q Consensus 112 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 190 (321)
.+-...+.++.|+|+.+.|++......-.++=...|+.+..++... .....+++..++.+.++--.++.+.++.+....
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 4445569999999999998887777766666556788888776422 334568888888777777788888888765432
Q ss_pred eeeee---------ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc-EE--EEEeccCCc----eeEEEe-EEE
Q 020798 191 CMKTL---------IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK-IL--KTYTGHTNS----KYCISS-TFS 253 (321)
Q Consensus 191 ~~~~~---------~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~-~~--~~~~~~~~~----~~~~~~-~~~ 253 (321)
..... ....+.....++|+|....|+.+-+-+-+.||.+.... .+ .....+... ..-++. .+.
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~ 241 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN 241 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence 11111 11225567889999999999999888888888765322 11 111111110 011111 233
Q ss_pred ecCCeEEEEeCCCCeEEEEEcccceEEEEec------CCCC---CeEEEEecCCCceEEE
Q 020798 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLE------GHTD---PVISVASHPTENIIAS 304 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~h~~---~v~~~~~~p~~~~l~s 304 (321)
...+..|+-+.+++.+.-.|... ..+..+. +... .--+++..++|.+.++
T Consensus 242 ~~~~~LLVLS~ESr~l~Evd~~G-~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIv 300 (316)
T COG3204 242 AITNSLLVLSDESRRLLEVDLSG-EVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIV 300 (316)
T ss_pred CCCCcEEEEecCCceEEEEecCC-CeeeeEEeccCCCCCcccCCCcceeEECCCCCEEEE
Confidence 34567777777888877777643 3333322 1111 2346777777765554
No 381
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.30 E-value=0.068 Score=43.50 Aligned_cols=220 Identities=14% Similarity=0.186 Sum_probs=118.0
Q ss_pred CCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE----------
Q 020798 83 SDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV---------- 152 (321)
Q Consensus 83 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~---------- 152 (321)
..++.|+.|+.+| +.+++.........+. +...|..+...|+-+.+++-+ |+.++++++..-.....
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~ 81 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR 81 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence 3567899999999 8999983322222222 233388999999877766654 49999999864332221
Q ss_pred ----EeCCCCCeeEEE--EccCCCEEEEEeCCCeEEEEeCCCC-----ceeeeeccCCCCCeEEEEEccCCCEEEEEecC
Q 020798 153 ----LPAHSDPVTAVD--FNRDGTMIVTSSYDGLCRIWDASTG-----HCMKTLIDDENPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 153 ----~~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d 221 (321)
.......+..++ -...+...++......+.+|..... +..+++... ..+..+.|. ++.++.|..+
T Consensus 82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp--~~~~~i~~~--~~~i~v~~~~ 157 (275)
T PF00780_consen 82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLP--DPPSSIAFL--GNKICVGTSK 157 (275)
T ss_pred cccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcC--CCcEEEEEe--CCEEEEEeCC
Confidence 001122333333 1123334444444458888776542 233444322 446677777 5567776644
Q ss_pred CeEEEEeCCCCcEEEEEeccCCc---------eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE--EecCCCCCe
Q 020798 222 NTLRLWNYSTGKILKTYTGHTNS---------KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ--KLEGHTDPV 290 (321)
Q Consensus 222 ~~i~i~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~h~~~v 290 (321)
...+.|+.++.....+...... ...+. .+..+++++|++- |..-.+.|. .|+... .+.-.. ..
T Consensus 158 -~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~W~~-~p 231 (275)
T PF00780_consen 158 -GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLG-IFQLSDNEFLLCY--DNIGVFVNK-NGEPSRKSTIQWSS-AP 231 (275)
T ss_pred -ceEEEecCCCCceEEeCccCCcchhhhcccCCCceE-EEEeCCceEEEEe--cceEEEEcC-CCCcCcccEEEcCC-ch
Confidence 4888898877654443211111 11122 2223456777653 233333344 343222 333322 44
Q ss_pred EEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 291 ISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 291 ~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.++++. ..+|+.-+ ++.|.||+++.
T Consensus 232 ~~~~~~--~pyli~~~---~~~iEV~~~~~ 256 (275)
T PF00780_consen 232 QSVAYS--SPYLIAFS---SNSIEVRSLET 256 (275)
T ss_pred hEEEEE--CCEEEEEC---CCEEEEEECcC
Confidence 666664 44666654 24699998864
No 382
>PHA02713 hypothetical protein; Provisional
Probab=97.28 E-value=0.031 Score=50.43 Aligned_cols=185 Identities=8% Similarity=0.042 Sum_probs=91.3
Q ss_pred CCCEEEEEeCC------CcEEEEecCCcceee--eeecCcccEEEEEECCCCCEEEEeeCCC-----cEEEEecCCCEEE
Q 020798 84 DSRFLVSASDD------KTIRLWDVPTATCLK--TLIGHTNYVFCVNFNPQSNMIVSGAFDE-----TVRIWDVKTGKCL 150 (321)
Q Consensus 84 ~~~~l~~~~~d------~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~ 150 (321)
++..++.||.+ ..+..||..++.... .+....... +++ .-++...+.||.++ .+..||..+.+-.
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~ 380 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDKWK 380 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-EECCEEEEECCcCCCCCCceEEEEECCCCeEE
Confidence 56666777753 347788877664321 111111111 111 22456667777654 3778888765422
Q ss_pred E--EEeCCCCCeeEEEEccCCCEEEEEeCCC-----------------------eEEEEeCCCCceeeeeccCCCCCeEE
Q 020798 151 K--VLPAHSDPVTAVDFNRDGTMIVTSSYDG-----------------------LCRIWDASTGHCMKTLIDDENPPVSF 205 (321)
Q Consensus 151 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------------------~i~~~d~~~~~~~~~~~~~~~~~~~~ 205 (321)
. .++........+. -++...+.|+.++ .+..||..+.+-........ +....
T Consensus 381 ~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~-~r~~~ 457 (557)
T PHA02713 381 MLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWT-GTIRP 457 (557)
T ss_pred ECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCc-ccccC
Confidence 1 1211111111222 2567777777542 46678876653211100000 11111
Q ss_pred EEEccCCCEEEEEecC------CeEEEEeCCC-CcEE--EEEeccCCceeEEEeEEEecCCeEEEEeCCCC--eEEEEEc
Q 020798 206 VKFSPNGKFILVGTLD------NTLRLWNYST-GKIL--KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS--CVYLWEL 274 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~d------~~i~i~d~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~vwd~ 274 (321)
....-+|+..+.|+.+ ..+..||..+ .+.. ..+... ..... ...-++...++|+.+| .+..||.
T Consensus 458 ~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~---r~~~~--~~~~~~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 458 GVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESR---LSALH--TILHDNTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred cEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcc---cccce--eEEECCEEEEEeeecceeehhhcCc
Confidence 1122356666777654 2467899876 4432 222211 11111 1123788889999888 6777777
Q ss_pred ccce
Q 020798 275 QSRK 278 (321)
Q Consensus 275 ~~~~ 278 (321)
.+.+
T Consensus 533 ~~~~ 536 (557)
T PHA02713 533 YTYE 536 (557)
T ss_pred cccc
Confidence 6654
No 383
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.28 E-value=0.084 Score=44.14 Aligned_cols=174 Identities=19% Similarity=0.293 Sum_probs=97.0
Q ss_pred cEEEEecCCcceeeeeec-CcccEEEEE---ECCC----CCEEEEeeC----------CCcEEEEecCCC----EEEEEE
Q 020798 96 TIRLWDVPTATCLKTLIG-HTNYVFCVN---FNPQ----SNMIVSGAF----------DETVRIWDVKTG----KCLKVL 153 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~-~~~~v~~~~---~~~~----~~~l~~~~~----------dg~i~~wd~~~~----~~~~~~ 153 (321)
.|++.|..+.+.+..+.- ..+.+.+++ +..+ ..+|+.|.. .|.|.++++... ..+..+
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 467777666655544321 122333333 3322 345665532 288999999874 122211
Q ss_pred --eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCc-eeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 154 --PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH-CMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 154 --~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
....++|++++-- ++ .++++ .++.+.+|++...+ ............+.++.. .++++++|.....+.++..+
T Consensus 83 ~~~~~~g~V~ai~~~-~~-~lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF-NG-RLVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYD 157 (321)
T ss_dssp EEEEESS-EEEEEEE-TT-EEEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEE
T ss_pred EEEeecCcceEhhhh-CC-EEEEe-ecCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEE
Confidence 2346788888765 34 44433 34789999987766 433332222334444443 46699999988888877544
Q ss_pred C-CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 231 T-GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
. ...+..+.....+.+..+..+.. +++.++++..+|.+.++...
T Consensus 158 ~~~~~l~~va~d~~~~~v~~~~~l~-d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 158 EENNKLILVARDYQPRWVTAAEFLV-DEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp TTTE-EEEEEEESS-BEEEEEEEE--SSSEEEEEETTSEEEEEEE-
T ss_pred ccCCEEEEEEecCCCccEEEEEEec-CCcEEEEEcCCCeEEEEEEC
Confidence 3 33244443333444444444442 34588889999999999886
No 384
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=97.25 E-value=0.12 Score=46.77 Aligned_cols=229 Identities=17% Similarity=0.194 Sum_probs=110.6
Q ss_pred CCCCCEEEEecCCc------eEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC-C-----cEEE
Q 020798 32 SHDGRLLASSSADK------TLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD-K-----TIRL 99 (321)
Q Consensus 32 s~~g~~l~~~~~d~------~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d-~-----~i~i 99 (321)
+..+.+++.|+.++ .+..||...... .....+. ....-.+++.. ++...++|+.| | ++..
T Consensus 282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w------~~~a~m~-~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~ 353 (571)
T KOG4441|consen 282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTNEW------SSLAPMP-SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVER 353 (571)
T ss_pred CCCCeEEEECCCCCCCcccceeEEecCCcCcE------eecCCCC-cccccccEEEE-CCEEEEEccccCCCcccceEEE
Confidence 33456777887774 455665543211 1111111 11122233333 45677888888 3 5778
Q ss_pred EecCCcceee--eeecCcccEEEEEECCCCCEEEEeeCCCc-----EEEEecCCCEEEEEEeCCCCCeeEEEE-ccCCCE
Q 020798 100 WDVPTATCLK--TLIGHTNYVFCVNFNPQSNMIVSGAFDET-----VRIWDVKTGKCLKVLPAHSDPVTAVDF-NRDGTM 171 (321)
Q Consensus 100 wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~~~ 171 (321)
||..+++... .+.......... .-+|...+.||.||. +-.||..+.+-... .....+...... .-+|.+
T Consensus 354 YD~~~~~W~~~a~M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v-a~m~~~r~~~gv~~~~g~i 430 (571)
T KOG4441|consen 354 YDPRTNQWTPVAPMNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV-APMLTRRSGHGVAVLGGKL 430 (571)
T ss_pred ecCCCCceeccCCccCccccceeE--EECCEEEEEeccccccccccEEEecCCCCccccc-CCCCcceeeeEEEEECCEE
Confidence 8887766322 111111111111 124667788888864 55677655431111 111111122221 225677
Q ss_pred EEEEeCCC------eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC-----eEEEEeCCCCcEEEE--E
Q 020798 172 IVTSSYDG------LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN-----TLRLWNYSTGKILKT--Y 238 (321)
Q Consensus 172 l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~-----~i~i~d~~~~~~~~~--~ 238 (321)
.++|+.++ ++..||..+..-...........-..+ -.-++...++|+.|+ ++..||..+.+.... .
T Consensus 431 Yi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~-a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m 509 (571)
T KOG4441|consen 431 YIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGV-AVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPM 509 (571)
T ss_pred EEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceE-EEECCEEEEECCccCCCccceEEEEcCCCCceeEcccC
Confidence 77887554 466788776543221111111111112 223677778888776 377788877654332 1
Q ss_pred eccCCceeEEEeEEEecCCeEEEEeCCCC-----eEEEEEcccc
Q 020798 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDS-----CVYLWELQSR 277 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 277 (321)
...... .. ....++...++|+.|| +|..||..+.
T Consensus 510 ~~~rs~---~g--~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d 548 (571)
T KOG4441|consen 510 TSPRSA---VG--VVVLGGKLYAVGGFDGNNNLNTVECYDPETD 548 (571)
T ss_pred cccccc---cc--EEEECCEEEEEecccCccccceeEEcCCCCC
Confidence 111111 11 1123678888888776 3555655443
No 385
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.20 E-value=0.12 Score=44.64 Aligned_cols=194 Identities=19% Similarity=0.204 Sum_probs=97.3
Q ss_pred EEECCCCCEEEEecCC-----------ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcE
Q 020798 29 VKFSHDGRLLASSSAD-----------KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d-----------~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
++.+|.|..+|....+ ..|.+|+..+ .++..+.-..+.|.++.|+.+.+ |+.-..||.+
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~sG---------~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v 103 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSSG---------KLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTV 103 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEECCCC---------CEeEEEEECCCCEEEEEECCCCe-EEEEEcCCEE
Confidence 4556666666665443 1366664432 22222221226789999988655 5566799999
Q ss_pred EEEecCCcc------eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-EEEEE---eC-----CCC-Cee
Q 020798 98 RLWDVPTAT------CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-CLKVL---PA-----HSD-PVT 161 (321)
Q Consensus 98 ~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~---~~-----~~~-~v~ 161 (321)
++||+.... ......-....+....+..+|-.+++ .++.+.+..--... ....+ +. +.. ...
T Consensus 104 ~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~GivvLt--~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~ 181 (410)
T PF04841_consen 104 RVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNGIVVLT--GNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWT 181 (410)
T ss_pred EEEeCCCceeechhhhccccCcccccccccccCCCCEEEEC--CCCeEEEEeCccccchhhccccCCCcccccccccccc
Confidence 999986333 01111111111222223334422333 33444433221111 11111 11 000 000
Q ss_pred -EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 162 -AVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 162 -~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
...++.+....+....++.+.+.+....+. + ....++..++.||+|++++.-..+|.+.+....-.+.+..+.
T Consensus 182 ~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i--~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~ 255 (410)
T PF04841_consen 182 VIPLLSSDRVVEILLANGETIYIIDENSFKQ---I--DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFD 255 (410)
T ss_pred cceEeecCcceEEEEecCCEEEEEEcccccc---c--cCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEee
Confidence 122334444445555555665444322111 1 123468899999999999999999999998765555554443
No 386
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.19 E-value=0.0062 Score=52.17 Aligned_cols=137 Identities=22% Similarity=0.269 Sum_probs=86.8
Q ss_pred CCCEEE-EEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCE-------EEEEecCCeEEEEeCCCCc--EEEE
Q 020798 168 DGTMIV-TSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKF-------ILVGTLDNTLRLWNYSTGK--ILKT 237 (321)
Q Consensus 168 ~~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-------l~~~~~d~~i~i~d~~~~~--~~~~ 237 (321)
+.++++ .+.....++-.|+..|+.+..+..... |+.+.+.|+.+. -++|-.|+.|--||.+-.. .+..
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d--i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~ 421 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD--INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV 421 (644)
T ss_pred ccceEeeCCCCcCcceeeecccceeeeEeeccCC--cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee
Confidence 344444 444556677889999998887754433 555666665432 2456678889999987432 2222
Q ss_pred EeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 238 YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
-+.++-....-..++......++++|+.+|-||+||--..+--..+.+...+|..+..+.+|.+++..+
T Consensus 422 ~q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc 490 (644)
T KOG2395|consen 422 VQSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC 490 (644)
T ss_pred eeccccccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec
Confidence 223221110011122223456899999999999999733333345778889999999999999887664
No 387
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.11 E-value=0.096 Score=41.67 Aligned_cols=199 Identities=16% Similarity=0.226 Sum_probs=107.6
Q ss_pred EEEECCCCC-EEEEEeCCCc-EEEEecCCcceeee--------eecCcccEEEEEECCCCCEEEEeeCC-----CcEEEE
Q 020798 78 DLVFSSDSR-FLVSASDDKT-IRLWDVPTATCLKT--------LIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIW 142 (321)
Q Consensus 78 ~~~~~~~~~-~l~~~~~d~~-i~iwd~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~w 142 (321)
.|+++|..+ -++.+-.=|+ ..++|....+.... +.+|. .|+|||.+|+..-.| |.|-+|
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHG------vfs~dG~~LYATEndfd~~rGViGvY 145 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHG------VFSPDGRLLYATENDFDPNRGVIGVY 145 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeeccc------ccCCCCcEEEeecCCCCCCCceEEEE
Confidence 467777543 3444544444 45677766654333 33443 589999998875433 789999
Q ss_pred ecCCC-EEEEEEeCCCCCeeEEEEccCCCEEEEEeCC------------------CeEEEEeCCCCceeeeecc---CCC
Q 020798 143 DVKTG-KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD------------------GLCRIWDASTGHCMKTLID---DEN 200 (321)
Q Consensus 143 d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------------g~i~~~d~~~~~~~~~~~~---~~~ 200 (321)
|.+.+ +.+-.++.|.-....+.+.+||+.++.+... -.+.+.|..++..+.+... ...
T Consensus 146 d~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~ 225 (366)
T COG3490 146 DAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQ 225 (366)
T ss_pred ecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhh
Confidence 98744 3445667777667889999999988766431 1233444444443332211 122
Q ss_pred CCeEEEEEccCCCEEEEEecCCe-----EEEEeCCCCcEEEEEeccCC-----ceeEEEeEEEecCCeEEEEeCCCCeEE
Q 020798 201 PPVSFVKFSPNGKFILVGTLDNT-----LRLWNYSTGKILKTYTGHTN-----SKYCISSTFSVTNGKYIVSGSEDSCVY 270 (321)
Q Consensus 201 ~~~~~~~~~~~g~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~dg~i~ 270 (321)
-.+..++..++|..++.+-..|. -.+=....++.+.-+..... ..+.-+......++...++.=.-+...
T Consensus 226 lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~v 305 (366)
T COG3490 226 LSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAV 305 (366)
T ss_pred cceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEE
Confidence 34677788888876655433221 11111223333332221110 011111122223444444444455677
Q ss_pred EEEcccceEEEE
Q 020798 271 LWELQSRKVVQK 282 (321)
Q Consensus 271 vwd~~~~~~~~~ 282 (321)
+||..++.++..
T Consensus 306 i~da~tG~vv~~ 317 (366)
T COG3490 306 IWDAATGAVVSE 317 (366)
T ss_pred EEEcCCCcEEec
Confidence 999999987653
No 388
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=97.06 E-value=0.27 Score=45.92 Aligned_cols=198 Identities=14% Similarity=0.148 Sum_probs=113.9
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCccc--------EEEEEEC----------------CCCCEEEEeeCCCcEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNY--------VFCVNFN----------------PQSNMIVSGAFDETVR 140 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~~----------------~~~~~l~~~~~dg~i~ 140 (321)
+..++.++.++.|.-.|..+++.+-.+...... ...+.+. .++..++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 456777788888888898888766554321110 1112221 1345788888999999
Q ss_pred EEecCCCEEEEEEeCCCCCe---------e----EEEEcc--CCCEEEEEeC----------CCeEEEEeCCCCceeeee
Q 020798 141 IWDVKTGKCLKVLPAHSDPV---------T----AVDFNR--DGTMIVTSSY----------DGLCRIWDASTGHCMKTL 195 (321)
Q Consensus 141 ~wd~~~~~~~~~~~~~~~~v---------~----~~~~~~--~~~~l~~~~~----------dg~i~~~d~~~~~~~~~~ 195 (321)
-.|.++|+....+... ..+ . .+.-.| .+..+++++. +|.|+-+|.++++.+-..
T Consensus 274 ALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 9999999877654321 111 0 011112 1345566542 688999999999876544
Q ss_pred ccCC----------------CCCe-EEEEEccCCCEEEEEe------------------cCCeEEEEeCCCCcEEEEEec
Q 020798 196 IDDE----------------NPPV-SFVKFSPNGKFILVGT------------------LDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 196 ~~~~----------------~~~~-~~~~~~~~g~~l~~~~------------------~d~~i~i~d~~~~~~~~~~~~ 240 (321)
.... ...+ ...++++....+..+. ..+.|.-.|.++++..-.++.
T Consensus 353 ~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~ 432 (764)
T TIGR03074 353 DPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT 432 (764)
T ss_pred ecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence 2110 0001 2244555444443322 124577778888888776654
Q ss_pred cCCce-------eEEEeEEEecCCe---EEEEeCCCCeEEEEEcccceEEEEe
Q 020798 241 HTNSK-------YCISSTFSVTNGK---YIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 241 ~~~~~-------~~~~~~~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
..... ..+.......+|+ .++.++.+|.+.++|.++++.+...
T Consensus 433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 11110 0111111112453 7889999999999999999987654
No 389
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.14 Score=42.27 Aligned_cols=200 Identities=15% Similarity=0.130 Sum_probs=108.7
Q ss_pred EEECCCCCEE-EEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcce
Q 020798 29 VKFSHDGRLL-ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC 107 (321)
Q Consensus 29 ~~~s~~g~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 107 (321)
..|.|+...| .+--..+.+.-|+.... ....+.. ...+.++..-..+..|+++ .. -+.+++.+.+..
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g---------~~~~~~~-p~~~~~~~~~d~~g~Lv~~-~~-g~~~~~~~~~~~ 97 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETG---------KKRVFPS-PGGFSSGALIDAGGRLIAC-EH-GVRLLDPDTGGK 97 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcC---------ceEEEEC-CCCcccceeecCCCeEEEE-cc-ccEEEeccCCce
Confidence 4577777644 44444566666654321 1111211 2223333333333344433 22 356666654443
Q ss_pred eeeee----c-CcccEEEEEECCCCCEEEEeeC-----------CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCE
Q 020798 108 LKTLI----G-HTNYVFCVNFNPQSNMIVSGAF-----------DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM 171 (321)
Q Consensus 108 ~~~~~----~-~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 171 (321)
...+. + .....+.+...|+|.+.++... -|.++.+|. .+.....+..+-..-+.++|+||++.
T Consensus 98 ~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~t 176 (307)
T COG3386 98 ITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKT 176 (307)
T ss_pred eEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCE
Confidence 12111 1 1133456778888887665443 133444443 35545555444445578999999987
Q ss_pred EEEEe-CCCeEEEEeCCC--C----ceeeeeccCCCCCeEEEEEccCCCEEEEEecCC-eEEEEeCCCCcEEEEEeccC
Q 020798 172 IVTSS-YDGLCRIWDAST--G----HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN-TLRLWNYSTGKILKTYTGHT 242 (321)
Q Consensus 172 l~~~~-~dg~i~~~d~~~--~----~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~ 242 (321)
|+.+. ..+.+.-|++.. + +...............++...+|.+.+++..+| .|.+|+.. ++++..+....
T Consensus 177 ly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~ 254 (307)
T COG3386 177 LYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPV 254 (307)
T ss_pred EEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCC
Confidence 66654 457788777652 1 111112222233445677888888876555554 89999987 88888887653
No 390
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.97 E-value=0.003 Score=35.50 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=27.6
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSL 52 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~ 52 (321)
...|.+++|+|...+||.++.+|.|.+|.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 457999999999999999999999999976
No 391
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.95 E-value=0.14 Score=40.77 Aligned_cols=183 Identities=16% Similarity=0.162 Sum_probs=108.0
Q ss_pred cEEEEEECCCCCEEEEeeCCC--cEEEEecCCCEEEEEEeCCCC-CeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceee
Q 020798 117 YVFCVNFNPQSNMIVSGAFDE--TVRIWDVKTGKCLKVLPAHSD-PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK 193 (321)
Q Consensus 117 ~v~~~~~~~~~~~l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 193 (321)
....+.+..++.++-+.+.-| .|+.+|+.+++.....+.... --..++.. +++.....=.++...+||..+.+.+.
T Consensus 46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~~ 124 (264)
T PF05096_consen 46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKIG 124 (264)
T ss_dssp EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEEEccccceEEE
Confidence 345677767777777776655 789999999987665543322 12234443 23344445568899999999877776
Q ss_pred eeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc--eeEEEeEEEecCCeEEEEeCCCCeEEE
Q 020798 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS--KYCISSTFSVTNGKYIVSGSEDSCVYL 271 (321)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~v 271 (321)
++.-..+ -..++ .+|+.|+.+.....|+++|..+-+..+.+.-.... ...+.-.-. -+|...|-.=....|..
T Consensus 125 ~~~y~~E--GWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~-i~G~IyANVW~td~I~~ 199 (264)
T PF05096_consen 125 TFPYPGE--GWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEY-INGKIYANVWQTDRIVR 199 (264)
T ss_dssp EEE-SSS----EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEE-ETTEEEEEETTSSEEEE
T ss_pred EEecCCc--ceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEE-EcCEEEEEeCCCCeEEE
Confidence 6543322 23333 57778888877889999999887777766543221 111221112 25666665555667777
Q ss_pred EEcccceEEEEecC------------C---CCCeEEEEecCCC-ceEEEE
Q 020798 272 WELQSRKVVQKLEG------------H---TDPVISVASHPTE-NIIASG 305 (321)
Q Consensus 272 wd~~~~~~~~~~~~------------h---~~~v~~~~~~p~~-~~l~s~ 305 (321)
.|..++++...+.- + .+-.+.+|+.|.. ++++||
T Consensus 200 Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 200 IDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 88888887664421 1 2347899998875 556665
No 392
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.91 E-value=0.0062 Score=56.48 Aligned_cols=100 Identities=26% Similarity=0.374 Sum_probs=74.0
Q ss_pred CCCEEEEEeCCCcEEEEecCCcce-eeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeE
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATC-LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTA 162 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 162 (321)
.+-.++.|+..|.+-..|+..+-. ...-..-..+|.+++|+.+|..++.|-.+|.|.+||+..++..+.+..|..+.+.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 345688888888888888765311 1122223567999999999999999999999999999999888888877777655
Q ss_pred EE---EccCCCEEEEEeCCCeEEEEe
Q 020798 163 VD---FNRDGTMIVTSSYDGLCRIWD 185 (321)
Q Consensus 163 ~~---~~~~~~~l~~~~~dg~i~~~d 185 (321)
+- +..++..++++...|. +|.
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs--f~~ 201 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS--FWK 201 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc--eEE
Confidence 43 3445567777777775 454
No 393
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.87 E-value=0.007 Score=46.18 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=61.3
Q ss_pred CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEE-EEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeec
Q 020798 35 GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVS-DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG 113 (321)
Q Consensus 35 g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 113 (321)
+..+++|+.+|.+.+|....... .......-...|. .+.--.++.+..+++.||.|+.|++..++.+.....
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~-------~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~ 142 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGA-------HSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQ 142 (238)
T ss_pred CceEEeecccceEEEecCCccch-------HHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeecc
Confidence 45788899999999986542110 0001111111222 222334556788999999999999988877666666
Q ss_pred Cc-ccEEEEEECCCCCEEEEe--eCCCcEEEEecC
Q 020798 114 HT-NYVFCVNFNPQSNMIVSG--AFDETVRIWDVK 145 (321)
Q Consensus 114 ~~-~~v~~~~~~~~~~~l~~~--~~dg~i~~wd~~ 145 (321)
|. ..+.....+..++++..+ +.|..++.|++.
T Consensus 143 h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 143 HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 66 444444444445555555 556666666654
No 394
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.83 E-value=0.025 Score=53.02 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=105.7
Q ss_pred EEEECCCCCEEEEecCCceEEEeeccccCCCCC---CCC-----Ccccccccc-cccEEEEEECCCCCEEEE--EeCCCc
Q 020798 28 SVKFSHDGRLLASSSADKTLLTYSLSSISNSDS---TPP-----SPLQKFTGH-EQGVSDLVFSSDSRFLVS--ASDDKT 96 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~---~~~-----~~~~~~~~h-~~~i~~~~~~~~~~~l~~--~~~d~~ 96 (321)
.++.++.-..+..++.-+.+.++....+..... .++ .+...+.-| .-.|..+...+|+...++ .+.+-.
T Consensus 46 ~la~sn~ysl~Fa~~nsk~L~vfgtknlLi~~it~D~~n~~Vd~~~~~t~~v~k~~pi~~~v~~~D~t~s~v~~tsng~~ 125 (1405)
T KOG3630|consen 46 NLAISNSYSLFFAASNSKSLAVFGTKNLLIDHITSDSTNSLVDADENLTFKVEKEIPIVIFVCFHDATDSVVVSTSNGEA 125 (1405)
T ss_pred hhhcccccceEEEecCCcceeeeccccceeecccccccccccccccccceeeeccccceEEEeccCCceEEEEEecCCce
Confidence 456666666666666677666664433221111 011 011222222 234566677778765443 344447
Q ss_pred EEEEecCCcceee-----ee------ecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCE-EEEEEeCCCCCeeEE
Q 020798 97 IRLWDVPTATCLK-----TL------IGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGK-CLKVLPAHSDPVTAV 163 (321)
Q Consensus 97 i~iwd~~~~~~~~-----~~------~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~v~~~ 163 (321)
|..||+++..... -+ ........++.|+|.- ...+.+..|+.|++..+.... ....++ -....+++
T Consensus 126 v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav 204 (1405)
T KOG3630|consen 126 VYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAV 204 (1405)
T ss_pred EEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-cccceeeE
Confidence 8889986543211 01 1122335577788753 235666788888887664322 112222 24567899
Q ss_pred EEccCCCEEEEEeCCCeEEEEeCCCCceeeee---ccCCCCCeEEEEEccCCCEEEE
Q 020798 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL---IDDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 164 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~l~~ 217 (321)
+|+|.|..++.|-..|++.-|-..-. ....+ .......|.++.|-....++++
T Consensus 205 ~WSprGKQl~iG~nnGt~vQy~P~le-ik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 205 LWSPRGKQLFIGRNNGTEVQYEPSLE-IKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred EeccccceeeEecCCCeEEEeecccc-eeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 99999999999999999988865422 11111 1122456788888777666655
No 395
>PHA03098 kelch-like protein; Provisional
Probab=96.79 E-value=0.22 Score=44.93 Aligned_cols=187 Identities=15% Similarity=0.122 Sum_probs=87.9
Q ss_pred CCCEEEEeeCCC------cEEEEecCCCEEEEE--EeCCCCCeeEEEEccCCCEEEEEeCC-----CeEEEEeCCCCcee
Q 020798 126 QSNMIVSGAFDE------TVRIWDVKTGKCLKV--LPAHSDPVTAVDFNRDGTMIVTSSYD-----GLCRIWDASTGHCM 192 (321)
Q Consensus 126 ~~~~l~~~~~dg------~i~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~ 192 (321)
++..++.|+.++ .+..||..+.+-... ++........+. -++..++.|+.+ ..+..||..+.+-.
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 371 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESKWR 371 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence 345566666432 467788776653221 111111112222 256677777765 24667887655322
Q ss_pred eeeccCCCCCeEEEEEccCCCEEEEEecC------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC
Q 020798 193 KTLIDDENPPVSFVKFSPNGKFILVGTLD------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266 (321)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 266 (321)
...... .+........-+++.++.|+.+ +.+..||..+.+....-... .+...... ...++..++.|+.+
T Consensus 372 ~~~~lp-~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p-~~r~~~~~--~~~~~~iyv~GG~~ 447 (534)
T PHA03098 372 EEPPLI-FPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLP-ISHYGGCA--IYHDGKIYVIGGIS 447 (534)
T ss_pred eCCCcC-cCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCC-ccccCceE--EEECCEEEEECCcc
Confidence 110000 0111111222356666776632 45888998765433221111 11111111 12356677777643
Q ss_pred C--------eEEEEEcccceE--EEEecCCCCCeEEEEecCCCceEEEEeecCC---ccEEEccccc
Q 020798 267 S--------CVYLWELQSRKV--VQKLEGHTDPVISVASHPTENIIASGALDND---RTVKIWTQEK 320 (321)
Q Consensus 267 g--------~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~---~~i~iw~~~~ 320 (321)
+ .+.+||..+.+- +..+.........+. .++.+++.||.+.. ..|.+||.+.
T Consensus 448 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 448 YIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred CCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCC
Confidence 2 378888876542 221211111111222 26778888875532 3678887654
No 396
>PRK10115 protease 2; Provisional
Probab=96.71 E-value=0.52 Score=43.86 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=65.7
Q ss_pred ccEEEEEECCCCCEEEEEeCC-----CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC------CcEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDD-----KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD------ETVRIW 142 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~w 142 (321)
-.+..+.++|++++|+.+... ..|++.|+.++..+........ ..++|.+|++.|+....+ ..|+.+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 346778899999988865332 2588889887763322211111 458999998876554332 367778
Q ss_pred ecCCC--EEEEEEeCCCCCee-EEEEccCCCEEEEEe---CCCeEEEEeC
Q 020798 143 DVKTG--KCLKVLPAHSDPVT-AVDFNRDGTMIVTSS---YDGLCRIWDA 186 (321)
Q Consensus 143 d~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~---~dg~i~~~d~ 186 (321)
++.++ +....+........ ....+.+++.++..+ .++.+.+++.
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 88777 33333333333333 233344777655433 3457888885
No 397
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.68 E-value=0.0083 Score=33.74 Aligned_cols=29 Identities=10% Similarity=0.290 Sum_probs=27.2
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
..|..++|+|...+||.++.+|.|.+|.+
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 45889999999999999999999999988
No 398
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.66 E-value=0.081 Score=40.82 Aligned_cols=91 Identities=21% Similarity=0.200 Sum_probs=63.4
Q ss_pred EEEEECCCCCEE-EEEeCCCcEEEEe--cCCccee-----eeeec----CcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 77 SDLVFSSDSRFL-VSASDDKTIRLWD--VPTATCL-----KTLIG----HTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 77 ~~~~~~~~~~~l-~~~~~d~~i~iwd--~~~~~~~-----~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
+.++|+.+.+.+ ++-+.+-+|..|| ..++... ..+.. .....-.+++..+|+..+++-..++|...|.
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp 240 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP 240 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence 467888776655 4567777887787 5555322 11111 0111123445667888888888899999999
Q ss_pred CCCEEEEEEeCCCCCeeEEEEcc
Q 020798 145 KTGKCLKVLPAHSDPVTAVDFNR 167 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~ 167 (321)
.+|+.+..+......+++++|--
T Consensus 241 ~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 241 TTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred CCCcEEEEEEcCCCceEEEEecC
Confidence 99999999988889999999963
No 399
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.64 E-value=0.48 Score=42.58 Aligned_cols=193 Identities=18% Similarity=0.240 Sum_probs=111.6
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCc-ccEE---E-------EEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHT-NYVF---C-------VNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~---~-------~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
+..++.++.++.|.-.|..+++.+-...... ..+. + +++ .+..++.++.++.+.-.|.++|+.+-..
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 3466677778889999999887765543211 1111 1 112 1356777888999999999999876554
Q ss_pred eCCCCC-eeEEEEcc---CCCEEEEEe------CCCeEEEEeCCCCceeeeeccCCC-----------------------
Q 020798 154 PAHSDP-VTAVDFNR---DGTMIVTSS------YDGLCRIWDASTGHCMKTLIDDEN----------------------- 200 (321)
Q Consensus 154 ~~~~~~-v~~~~~~~---~~~~l~~~~------~dg~i~~~d~~~~~~~~~~~~~~~----------------------- 200 (321)
...... -..+.-+| ++ .++++. .+|.+..+|.++++.+-.......
T Consensus 147 ~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~ 225 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPG 225 (527)
T ss_pred ccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCC
Confidence 321100 00111112 34 444443 268899999998876543321100
Q ss_pred -------CCe-EEEEEccCCCEEEEEecC-----C-----------eEEEEeCCCCcEEEEEeccCCcee-----EEEeE
Q 020798 201 -------PPV-SFVKFSPNGKFILVGTLD-----N-----------TLRLWNYSTGKILKTYTGHTNSKY-----CISST 251 (321)
Q Consensus 201 -------~~~-~~~~~~~~g~~l~~~~~d-----~-----------~i~i~d~~~~~~~~~~~~~~~~~~-----~~~~~ 251 (321)
..+ ..+.++|...++..+..+ + .|.-.|+++++..-.++......+ .-..+
T Consensus 226 ~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l 305 (527)
T TIGR03075 226 DAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMIL 305 (527)
T ss_pred CccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEE
Confidence 001 124666666666655422 2 577778899988777654221110 00011
Q ss_pred EE-ecCCe---EEEEeCCCCeEEEEEcccceEE
Q 020798 252 FS-VTNGK---YIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 252 ~~-~~~~~---~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
+. ..+|+ .++.+..+|.+++.|-.+++.+
T Consensus 306 ~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 306 FDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred EEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 11 13554 7889999999999999999876
No 400
>PHA03098 kelch-like protein; Provisional
Probab=96.58 E-value=0.35 Score=43.66 Aligned_cols=187 Identities=16% Similarity=0.131 Sum_probs=86.9
Q ss_pred CCCEEEEEeCCC------cEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCC-----CcEEEEecCCCEEE
Q 020798 84 DSRFLVSASDDK------TIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIWDVKTGKCL 150 (321)
Q Consensus 84 ~~~~l~~~~~d~------~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~ 150 (321)
++..++.|+.++ .+..||..+.+.... +.........+. -++..++.||.+ ..+..||..+++-.
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 371 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESKWR 371 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence 455666676543 467788777654221 110111111222 245666777754 24667787665422
Q ss_pred E--EEeCCCCCeeEEEEccCCCEEEEEeCC------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC-
Q 020798 151 K--VLPAHSDPVTAVDFNRDGTMIVTSSYD------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD- 221 (321)
Q Consensus 151 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d- 221 (321)
. .++..... .+++ .-++..++.|+.+ ..+..||+.+.+-........ +.....+...++..++.|+.+
T Consensus 372 ~~~~lp~~r~~-~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~ 448 (534)
T PHA03098 372 EEPPLIFPRYN-PCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPI-SHYGGCAIYHDGKIYVIGGISY 448 (534)
T ss_pred eCCCcCcCCcc-ceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCc-cccCceEEEECCEEEEECCccC
Confidence 1 11111111 1122 2356666777632 357788887653221110000 000111222356666666542
Q ss_pred -------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccce
Q 020798 222 -------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRK 278 (321)
Q Consensus 222 -------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 278 (321)
..+.+||..+.+....-... .+....... ..++..++.|+.+ ..+.+||..+.+
T Consensus 449 ~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 449 IDNIKVYNIVESYNPVTNKWTELSSLN-FPRINASLC--IFNNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred CCCCcccceEEEecCCCCceeeCCCCC-cccccceEE--EECCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 23888998776543321111 011111111 1267777777654 467888876543
No 401
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.58 E-value=0.33 Score=39.91 Aligned_cols=152 Identities=14% Similarity=0.194 Sum_probs=74.5
Q ss_pred ccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec-CCCEEE
Q 020798 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV-KTGKCL 150 (321)
Q Consensus 72 h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~-~~~~~~ 150 (321)
-.+.+..+.-+++|++++++..-.-+.-||.....-...-..-...+..+.|.|++...+.+ ..|.|+.=+. ...+.-
T Consensus 143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w 221 (302)
T PF14870_consen 143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETW 221 (302)
T ss_dssp ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE
T ss_pred CcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCcccc
Confidence 34678888899999988887665555677754332222223346779999999998765544 7788877652 111111
Q ss_pred EE--Ee--CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc--CCCCCeEEEEEccCCCEEEEEecCCeE
Q 020798 151 KV--LP--AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID--DENPPVSFVKFSPNGKFILVGTLDNTL 224 (321)
Q Consensus 151 ~~--~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~d~~i 224 (321)
.. .+ ...-.+.+++|.+++...++++. |.+ +.....++.=++... ........+.|.+..+-++ -+.+|.|
T Consensus 222 ~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~-lG~~G~l 298 (302)
T PF14870_consen 222 SEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV-LGQDGVL 298 (302)
T ss_dssp ---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE-E-STTEE
T ss_pred ccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEE-ECCCcEE
Confidence 11 11 12223688999988877765554 444 233444443222211 2233466777776655444 4567766
Q ss_pred EEE
Q 020798 225 RLW 227 (321)
Q Consensus 225 ~i~ 227 (321)
.-|
T Consensus 299 l~~ 301 (302)
T PF14870_consen 299 LRY 301 (302)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 402
>PHA02790 Kelch-like protein; Provisional
Probab=96.34 E-value=0.7 Score=41.09 Aligned_cols=183 Identities=9% Similarity=0.030 Sum_probs=84.0
Q ss_pred CCCEEEEEeCCC-----cEEEEecCCcceee--eeecCcccEEEEEECCCCCEEEEeeCC--CcEEEEecCCCEEEE--E
Q 020798 84 DSRFLVSASDDK-----TIRLWDVPTATCLK--TLIGHTNYVFCVNFNPQSNMIVSGAFD--ETVRIWDVKTGKCLK--V 152 (321)
Q Consensus 84 ~~~~l~~~~~d~-----~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~wd~~~~~~~~--~ 152 (321)
++..+++|+.++ .+..||..+++... .+.........+ .-++...+.|+.+ ..+..||..+++-.. .
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v--~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV--PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS 348 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE--EECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence 345566776543 46678877654322 111111111112 2345666777653 357778876553221 1
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeCCC---eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSYDG---LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
++...... ++ ..-++...+.|+.++ .+..||.++..-........ +.....+..-+|+..+.|+ ...+||.
T Consensus 349 l~~~r~~~-~~-~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~-~r~~~~~~~~~~~IYv~GG---~~e~ydp 422 (480)
T PHA02790 349 LLKPRCNP-AV-ASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY-PHYKSCALVFGRRLFLVGR---NAEFYCE 422 (480)
T ss_pred CCCCCccc-EE-EEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCC-ccccceEEEECCEEEEECC---ceEEecC
Confidence 21111111 11 223567777777543 46678876653221100000 1111112233566666663 5778988
Q ss_pred CCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccc
Q 020798 230 STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSR 277 (321)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 277 (321)
.+.+-...-... .+...... ...+++..+.|+.+ ..+..||..+.
T Consensus 423 ~~~~W~~~~~m~-~~r~~~~~--~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 423 SSNTWTLIDDPI-YPRDNPEL--IIVDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred CCCcEeEcCCCC-CCccccEE--EEECCEEEEECCcCCCcccceEEEEECCCC
Confidence 766543221111 11111111 12367778888754 24555665443
No 403
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.32 E-value=0.41 Score=38.17 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=99.3
Q ss_pred EEEEEECCCCCEEEEEeCCC--cEEEEecCCcceeeeeecCc-ccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE
Q 020798 76 VSDLVFSSDSRFLVSASDDK--TIRLWDVPTATCLKTLIGHT-NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 152 (321)
...+.|..++.++-+.+.-| .|+.+|+.+++......-.. -.--.++...+ ....-.-.++...+||..+-+.+..
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~tl~~~~~ 125 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWKEGTGFVYDPNTLKKIGT 125 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESSSSEEEEEETTTTEEEEE
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEecCCeEEEEccccceEEEE
Confidence 34577767788777877776 68999999998765443221 12223444332 3334456788999999998888877
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC-CC---CCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD-EN---PPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~---~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
++- ...=+.++ .++..|+.......++++|..+.+....+... .. ..++.+.+- +|...+-.-....|...|
T Consensus 126 ~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Id 201 (264)
T PF05096_consen 126 FPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRID 201 (264)
T ss_dssp EE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred Eec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEe
Confidence 753 23446666 56777888888889999998876655544221 11 124455554 565555555677899999
Q ss_pred CCCCcEEEEEe
Q 020798 229 YSTGKILKTYT 239 (321)
Q Consensus 229 ~~~~~~~~~~~ 239 (321)
..+|+.+..+.
T Consensus 202 p~tG~V~~~iD 212 (264)
T PF05096_consen 202 PETGKVVGWID 212 (264)
T ss_dssp TTT-BEEEEEE
T ss_pred CCCCeEEEEEE
Confidence 99999888763
No 404
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.31 E-value=0.59 Score=39.97 Aligned_cols=195 Identities=16% Similarity=0.250 Sum_probs=88.2
Q ss_pred CCCEEEEec-CCceEEEeeccccCCCCCCCCCccccccc---cc----ccEEEEEECCCCCEEEEEe--CC----CcEEE
Q 020798 34 DGRLLASSS-ADKTLLTYSLSSISNSDSTPPSPLQKFTG---HE----QGVSDLVFSSDSRFLVSAS--DD----KTIRL 99 (321)
Q Consensus 34 ~g~~l~~~~-~d~~v~~~~~~~~~~~~~~~~~~~~~~~~---h~----~~i~~~~~~~~~~~l~~~~--~d----~~i~i 99 (321)
+.++|+..+ ..+.|.+.|+..-. ..+.....+.. +. .....+-.-|+|+.++++- .+ |-+.+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dP----r~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~l 161 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDP----RKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVL 161 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-T----TS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEE
T ss_pred cCCcEEeeeeccCcEEEEECCCCC----CCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEE
Confidence 456666655 67788888876311 11111111111 11 1223344457888887653 22 34777
Q ss_pred EecCCcceeeeeec---CcccEEEEEECCCCCEEEEeeC--------------------CCcEEEEecCCCEEEEEEeCC
Q 020798 100 WDVPTATCLKTLIG---HTNYVFCVNFNPQSNMIVSGAF--------------------DETVRIWDVKTGKCLKVLPAH 156 (321)
Q Consensus 100 wd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~--------------------dg~i~~wd~~~~~~~~~~~~~ 156 (321)
+|-++.+....... ....-...-+.|..+.++|... ...+.+||+.+.+.++++...
T Consensus 162 lD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg 241 (461)
T PF05694_consen 162 LDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLG 241 (461)
T ss_dssp E-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-
T ss_pred EcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecC
Confidence 88776655444322 1233455667777777777543 357999999999999988765
Q ss_pred CC--CeeEEEEc--cCCCE-EEEEeCCCeEEEE-eCCCCce----eeeecc---------C-------CCCCeEEEEEcc
Q 020798 157 SD--PVTAVDFN--RDGTM-IVTSSYDGLCRIW-DASTGHC----MKTLID---------D-------ENPPVSFVKFSP 210 (321)
Q Consensus 157 ~~--~v~~~~~~--~~~~~-l~~~~~dg~i~~~-d~~~~~~----~~~~~~---------~-------~~~~~~~~~~~~ 210 (321)
.. ....+.|. |+... ++.+.-.+.|..| ..+.+.- +-.+.. . ..+-++.+.+|.
T Consensus 242 ~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSl 321 (461)
T PF05694_consen 242 EEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISL 321 (461)
T ss_dssp TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-T
T ss_pred CCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEcc
Confidence 43 24456664 44443 3333334444443 3233221 111100 0 023467889999
Q ss_pred CCCEEEEEe-cCCeEEEEeCCCC
Q 020798 211 NGKFILVGT-LDNTLRLWNYSTG 232 (321)
Q Consensus 211 ~g~~l~~~~-~d~~i~i~d~~~~ 232 (321)
|.++|.+++ .+|.|+.||+.+.
T Consensus 322 DDrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 322 DDRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp TS-EEEEEETTTTEEEEEE-SST
T ss_pred CCCEEEEEcccCCcEEEEecCCC
Confidence 999998877 5899999999764
No 405
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=96.24 E-value=0.65 Score=39.73 Aligned_cols=198 Identities=14% Similarity=0.091 Sum_probs=101.0
Q ss_pred CCCEEEEEeCCCcEEEEecCCcceeeeeecC--cccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCC-Ce
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGH--TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD-PV 160 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-~v 160 (321)
+++ ++.+..+|.|.-.|..+++.+.....- ...+..-....+|+ ++.++.++.++.+|.++++..-....... .+
T Consensus 68 dg~-v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~ 145 (370)
T COG1520 68 DGT-VYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYY 145 (370)
T ss_pred CCe-EEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEE
Confidence 444 555678888888888887744322111 11122222222454 77788889999999888887766655441 11
Q ss_pred eEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCC--CCCeEEEEEccCCCEEEEEec--CCeEEEEeCCCCcEEE
Q 020798 161 TAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE--NPPVSFVKFSPNGKFILVGTL--DNTLRLWNYSTGKILK 236 (321)
Q Consensus 161 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~--d~~i~i~d~~~~~~~~ 236 (321)
..-..-.++ .+...+.++.+...|..++...-...... ...+.......++ .+..+.. ++.+.-+|..++...-
T Consensus 146 ~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~vy~~~~~~~~~~~a~~~~~G~~~w 223 (370)
T COG1520 146 ASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASG-TVYVGSDGYDGILYALNAEDGTLKW 223 (370)
T ss_pred ecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecc-eEEEecCCCcceEEEEEccCCcEee
Confidence 111111233 33344467888888877776543322111 1111110012233 3344444 5567777887777665
Q ss_pred EEeccCCce-------eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCC
Q 020798 237 TYTGHTNSK-------YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH 286 (321)
Q Consensus 237 ~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h 286 (321)
......... ..+.......++ .+..++.++.+...+..+++.+.+....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 224 SQKVSQTIGRTAISTTPAVDGGPVYVDG-GVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred eeeeecccCcccccccccccCceEEECC-cEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 532111000 000000000112 2355667777888888888888776653
No 406
>PHA02790 Kelch-like protein; Provisional
Probab=96.21 E-value=0.83 Score=40.64 Aligned_cols=183 Identities=8% Similarity=0.039 Sum_probs=87.9
Q ss_pred CCEEEEeeCCC-----cEEEEecCCCEEEEE--EeCCCCCeeEEEEccCCCEEEEEeCC--CeEEEEeCCCCceeeeecc
Q 020798 127 SNMIVSGAFDE-----TVRIWDVKTGKCLKV--LPAHSDPVTAVDFNRDGTMIVTSSYD--GLCRIWDASTGHCMKTLID 197 (321)
Q Consensus 127 ~~~l~~~~~dg-----~i~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~~d~~~~~~~~~~~~ 197 (321)
+..++.|+.++ .+..||..+++-... ++...... +++ .-++...+.|+.+ ..+..||..+..-......
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~-~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l 349 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYA-SGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSL 349 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcc-eEE-EECCEEEEECCcCCCCceEEEECCCCeEEECCCC
Confidence 34456666542 466788776643221 11111111 122 2356677777753 3567788765432111000
Q ss_pred CCCCCeEEEEEccCCCEEEEEecCC---eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 198 DENPPVSFVKFSPNGKFILVGTLDN---TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 198 ~~~~~~~~~~~~~~g~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
. .+........-+|+..+.|+.++ .+..||..+.+........ .+.... .....++...+.|+ .+.+||.
T Consensus 350 ~-~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~-~~r~~~--~~~~~~~~IYv~GG---~~e~ydp 422 (480)
T PHA02790 350 L-KPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTY-YPHYKS--CALVFGRRLFLVGR---NAEFYCE 422 (480)
T ss_pred C-CCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCC-Cccccc--eEEEECCEEEEECC---ceEEecC
Confidence 1 11111122234677777777543 4778887765443221111 111111 11123577777774 4678888
Q ss_pred ccceE--EEEecCCCCCeEEEEecCCCceEEEEeecCC---ccEEEccccc
Q 020798 275 QSRKV--VQKLEGHTDPVISVASHPTENIIASGALDND---RTVKIWTQEK 320 (321)
Q Consensus 275 ~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~---~~i~iw~~~~ 320 (321)
.+.+- +..+....... +++. -++++.+.||.++. ..|..||.+.
T Consensus 423 ~~~~W~~~~~m~~~r~~~-~~~v-~~~~IYviGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 423 SSNTWTLIDDPIYPRDNP-ELII-VDNKLLLIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred CCCcEeEcCCCCCCcccc-EEEE-ECCEEEEECCcCCCcccceEEEEECCC
Confidence 66532 22232212222 2222 36788888876532 3577888764
No 407
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.18 E-value=0.44 Score=42.10 Aligned_cols=148 Identities=11% Similarity=0.202 Sum_probs=84.8
Q ss_pred ccEEEEEECCCCCEE-EEEe--CCCcEEEEecCCcceeeeeecCcccEEEEEECCCC----CEEEEeeCCCcEEEEecCC
Q 020798 74 QGVSDLVFSSDSRFL-VSAS--DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS----NMIVSGAFDETVRIWDVKT 146 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l-~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~wd~~~ 146 (321)
.++..++|. ||+.+ ++.- .+|.++.=| ....|.-+.|..+.|.|-+ --+++.-....|.+|.+..
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd-------s~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~ 91 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD-------SKVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCP 91 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCC-------ccEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEecc
Confidence 357789997 56544 4432 233333222 1234555678899999853 2344555678899999852
Q ss_pred -----CEEEEEEeCC---CCC--eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEE
Q 020798 147 -----GKCLKVLPAH---SDP--VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFIL 216 (321)
Q Consensus 147 -----~~~~~~~~~~---~~~--v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 216 (321)
++.......+ .-+ -..+.|+|....|++-.....-.+++.+........--.....|.+.+|.+||+.|+
T Consensus 92 s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLV 171 (671)
T PF15390_consen 92 STTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLV 171 (671)
T ss_pred CccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEE
Confidence 2222111111 111 245789999888776655554445665533222222223455688999999999987
Q ss_pred EEec-CCeEEEEeC
Q 020798 217 VGTL-DNTLRLWNY 229 (321)
Q Consensus 217 ~~~~-d~~i~i~d~ 229 (321)
++-. .=.-++||-
T Consensus 172 VAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 172 VAVGSSLHSYIWDS 185 (671)
T ss_pred EEeCCeEEEEEecC
Confidence 7643 335677873
No 408
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.02 E-value=0.75 Score=39.30 Aligned_cols=145 Identities=15% Similarity=0.143 Sum_probs=73.6
Q ss_pred ccEEEEEECCCCCEEEEec-----------CCc-eEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 24 RAISSVKFSHDGRLLASSS-----------ADK-TLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~-----------~d~-~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
.....++|.++|+++++-. ..+ .|.+++-.+... . ......+...-.....+++.+++ +++ +
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG---~-~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~ 87 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDG---K-YDKSNVFAEELSMVTGLAVAVGG-VYV-A 87 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCC---C-cceeEEeecCCCCccceeEecCC-EEE-e
Confidence 4556789999999877642 122 555553321110 0 00111222222345778888888 444 4
Q ss_pred eCCCcEEEE-ecCCc-----c--eee-eeec----CcccEEEEEECCCCCEEEEeeCC-------------------CcE
Q 020798 92 SDDKTIRLW-DVPTA-----T--CLK-TLIG----HTNYVFCVNFNPQSNMIVSGAFD-------------------ETV 139 (321)
Q Consensus 92 ~~d~~i~iw-d~~~~-----~--~~~-~~~~----~~~~v~~~~~~~~~~~l~~~~~d-------------------g~i 139 (321)
... .|..+ +.... + .+. .+.. +......+++.|||.+.++-+.. |.|
T Consensus 88 ~~~-~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i 166 (367)
T TIGR02604 88 TPP-DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGL 166 (367)
T ss_pred CCC-eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceE
Confidence 444 34433 44221 1 111 1211 12336688999999876654421 345
Q ss_pred EEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEe
Q 020798 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS 176 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 176 (321)
..++...++.. .+...-.....++|+|+|+++++-.
T Consensus 167 ~r~~pdg~~~e-~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 167 FRYNPDGGKLR-VVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred EEEecCCCeEE-EEecCcCCCccceECCCCCEEEEcc
Confidence 55555544322 2222223346789999888776544
No 409
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=96.01 E-value=0.65 Score=37.65 Aligned_cols=221 Identities=15% Similarity=0.185 Sum_probs=122.6
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecC------Cc-ceeeeeec-----CcccEEEEEECCCC------------CEEE
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVP------TA-TCLKTLIG-----HTNYVFCVNFNPQS------------NMIV 131 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~------~~-~~~~~~~~-----~~~~v~~~~~~~~~------------~~l~ 131 (321)
-..|+++|.+.+-++....+...+||.. .. ...-.+.. .....+.+.|+... ..++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 4578999999888888888889999986 11 11222221 12234555555322 2367
Q ss_pred EeeCCCcEEEEecCCCEE-----EEEEeCC-CCCe-eEEEEcc--CCCEEEEEe-CCCeEEEEeCCCCceee--eeccC-
Q 020798 132 SGAFDETVRIWDVKTGKC-----LKVLPAH-SDPV-TAVDFNR--DGTMIVTSS-YDGLCRIWDASTGHCMK--TLIDD- 198 (321)
Q Consensus 132 ~~~~dg~i~~wd~~~~~~-----~~~~~~~-~~~v-~~~~~~~--~~~~l~~~~-~dg~i~~~d~~~~~~~~--~~~~~- 198 (321)
.+++||+|.-|...-+.. ...+... ...| ..+++.. .+.+|..+. ..++|.+||-.-.+... .+...
T Consensus 105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP~ 184 (336)
T TIGR03118 105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDPA 184 (336)
T ss_pred EEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCCC
Confidence 788999999998532221 1122211 2233 3344443 345555554 57889999865332110 01000
Q ss_pred --CCC------------CeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC--CceeEEEe---EEEecCCeE
Q 020798 199 --ENP------------PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT--NSKYCISS---TFSVTNGKY 259 (321)
Q Consensus 199 --~~~------------~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~ 259 (321)
... .|+...-.+++..=+.+...|.|.+||+ ++++++++.... +..+.+.. .|-...+.+
T Consensus 185 iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~l 263 (336)
T TIGR03118 185 LPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPESFGSLSGAL 263 (336)
T ss_pred CCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChhhhCCCCCCe
Confidence 000 0111222222222223334468999995 477777774221 22233322 122345778
Q ss_pred EEEeCCCCeEEEEEcccceEEEEecCCC------CCeEEEEecC
Q 020798 260 IVSGSEDSCVYLWELQSRKVVQKLEGHT------DPVISVASHP 297 (321)
Q Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~h~------~~v~~~~~~p 297 (321)
|+.--.||+|..||..+++.+..+.... .-++.|+|..
T Consensus 264 LVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 264 LVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred EEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 8877789999999999888777766543 3467888865
No 410
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=95.96 E-value=0.011 Score=54.09 Aligned_cols=170 Identities=14% Similarity=0.265 Sum_probs=90.5
Q ss_pred ccCCcccEEEEEECCC-CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEEC---CCCCEEEEEeCC
Q 020798 19 LNGHLRAISSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFS---SDSRFLVSASDD 94 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~---~~~~~l~~~~~d 94 (321)
++|-.++|-.++|.+. ...++ -.-|.+.+|++.-.... ..+...+.....-...+.-+.|. ++.-++..+-.+
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~-iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~ 204 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGE-IQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKG 204 (1283)
T ss_pred HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccc-cccceEEeecCcCCCCcceeeecccccccceeeeccCC
Confidence 3556677888888642 22332 33456778887653221 11111111111112233444454 466677788888
Q ss_pred CcEEEEecCCcceeeeeecCcccEEE-----------EEECCCCCEEEEeeCCCcEEEEecC-----CCEEEEEEeCCCC
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFC-----------VNFNPQSNMIVSGAFDETVRIWDVK-----TGKCLKVLPAHSD 158 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~-----------~~~~~~~~~l~~~~~dg~i~~wd~~-----~~~~~~~~~~~~~ 158 (321)
+++++.++..... .-+.+|+..+.. -.++|||..|+.+..||.++.|.+. .-++....+.|..
T Consensus 205 ~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~ 283 (1283)
T KOG1916|consen 205 GEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDK 283 (1283)
T ss_pred CceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCC
Confidence 8988877654322 223345433322 2379999999999999999999763 1223344455552
Q ss_pred -CeeEEEEccCC---------CEEEEEe-CCCeEEEEeCCCCcee
Q 020798 159 -PVTAVDFNRDG---------TMIVTSS-YDGLCRIWDASTGHCM 192 (321)
Q Consensus 159 -~v~~~~~~~~~---------~~l~~~~-~dg~i~~~d~~~~~~~ 192 (321)
+-.|.-|+.+. .++++++ .+..+++|....-+|.
T Consensus 284 ~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 284 HPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred CCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 21111122211 2344444 3456788876655554
No 411
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=95.88 E-value=0.89 Score=38.84 Aligned_cols=142 Identities=15% Similarity=0.171 Sum_probs=68.6
Q ss_pred CeeEEEEccCCCEEEEEe-----------CCC-eEEEEeCCC--Cce--eeeeccCCCCCeEEEEEccCCCEEEEEecCC
Q 020798 159 PVTAVDFNRDGTMIVTSS-----------YDG-LCRIWDAST--GHC--MKTLIDDENPPVSFVKFSPNGKFILVGTLDN 222 (321)
Q Consensus 159 ~v~~~~~~~~~~~l~~~~-----------~dg-~i~~~d~~~--~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~ 222 (321)
....++|.++|+++++.. ..+ .|.+++-.+ ++. ...+. ........+++.++| ++ ++...
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa-~~l~~p~Gi~~~~~G-ly-V~~~~- 90 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFA-EELSMVTGLAVAVGG-VY-VATPP- 90 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEee-cCCCCccceeEecCC-EE-EeCCC-
Confidence 346788888888776642 223 676665432 222 12222 222234678888888 44 44444
Q ss_pred eEEEE-eCCC-----CcE--E-EEEeccCC-ceeEEEeEEEecCCeEEEEeCC-------------------CCeEEEEE
Q 020798 223 TLRLW-NYST-----GKI--L-KTYTGHTN-SKYCISSTFSVTNGKYIVSGSE-------------------DSCVYLWE 273 (321)
Q Consensus 223 ~i~i~-d~~~-----~~~--~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-------------------dg~i~vwd 273 (321)
.|..| |... ++. + ..+..... ...........+||.+.++-+. .|.|.-++
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~ 170 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN 170 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence 34444 4421 121 1 11221100 0111222233456665543331 13455555
Q ss_pred cccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 274 LQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 274 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
...++....-.++. ....++|+|+|+++++-
T Consensus 171 pdg~~~e~~a~G~r-np~Gl~~d~~G~l~~td 201 (367)
T TIGR02604 171 PDGGKLRVVAHGFQ-NPYGHSVDSWGDVFFCD 201 (367)
T ss_pred cCCCeEEEEecCcC-CCccceECCCCCEEEEc
Confidence 54444322223443 34789999999998764
No 412
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.59 E-value=0.11 Score=48.95 Aligned_cols=149 Identities=15% Similarity=0.106 Sum_probs=89.6
Q ss_pred cEEEEEECCCCCEEEE--ecCCceEEEeeccccCCCCCCCCCcccc---cccccccEEEEEECCCCC-EEEEEeCCCcEE
Q 020798 25 AISSVKFSHDGRLLAS--SSADKTLLTYSLSSISNSDSTPPSPLQK---FTGHEQGVSDLVFSSDSR-FLVSASDDKTIR 98 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~--~~~d~~v~~~~~~~~~~~~~~~~~~~~~---~~~h~~~i~~~~~~~~~~-~l~~~~~d~~i~ 98 (321)
++..+...+|++..++ .+++..|..||+..+.........++.. ......-..++.|+|.=. ..+....|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 4556667788775444 4555578888887754333222222211 111122345778887532 356677888888
Q ss_pred EEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC----CCCeeEEEEccCCCEEEE
Q 020798 99 LWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH----SDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 99 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~ 174 (321)
+..+.-......-.......++++|+|.|.+++.|-..|++.-|... .+....+++. ...|.++.|-....++++
T Consensus 182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 87654322111112245568899999999999999999999888643 2322333221 356889999876666554
No 413
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=95.53 E-value=0.67 Score=40.28 Aligned_cols=143 Identities=22% Similarity=0.286 Sum_probs=84.9
Q ss_pred CCCCEEE-EEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCC-------CEEEEeeCCCcEEEEecCC-CEEEEEE
Q 020798 83 SDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS-------NMIVSGAFDETVRIWDVKT-GKCLKVL 153 (321)
Q Consensus 83 ~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-------~~l~~~~~dg~i~~wd~~~-~~~~~~~ 153 (321)
.+..+|+ .|+.-..++--|++.++.+.....|... -+.+.|.. ..-+.|-.+..|.-.|.+- +..+...
T Consensus 477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~ 554 (776)
T COG5167 477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVV 554 (776)
T ss_pred CCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeee
Confidence 3455554 4455566777788888888877766664 46677753 2223444455555556543 2222211
Q ss_pred eCCCCCeeEEEEc----cCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 154 PAHSDPVTAVDFN----RDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 154 ~~~~~~v~~~~~~----~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
.....++.-.|+ ....++++++..|-|++||--. ...++.+...+..|..+..+.+|+++++.+. ..+.+-|+
T Consensus 555 -esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~ 631 (776)
T COG5167 555 -ESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDV 631 (776)
T ss_pred -eehhccccccccccccccCceEEEecCCCceeeehhhc-chhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEec
Confidence 112222222222 2345899999999999999532 2233344445566888889999999877664 46777775
Q ss_pred C
Q 020798 230 S 230 (321)
Q Consensus 230 ~ 230 (321)
+
T Consensus 632 ~ 632 (776)
T COG5167 632 P 632 (776)
T ss_pred c
Confidence 3
No 414
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.30 E-value=0.95 Score=34.54 Aligned_cols=174 Identities=14% Similarity=0.143 Sum_probs=87.0
Q ss_pred CCEEEEeeC--CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE-EEEeCCCeEEEEeCCCCceeeeeccCCCCCe
Q 020798 127 SNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI-VTSSYDGLCRIWDASTGHCMKTLIDDENPPV 203 (321)
Q Consensus 127 ~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~ 203 (321)
+..+.+.+. ...|++||+.+++.+...+.....+..=-...-+..+ ...=.+|.-..+|.++.++...+.-..
T Consensus 56 g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~G---- 131 (262)
T COG3823 56 GHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEG---- 131 (262)
T ss_pred CEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCC----
Confidence 445555543 3579999999888766544322122111111123333 334467888889988776655442211
Q ss_pred EEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC--CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE
Q 020798 204 SFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT--NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ 281 (321)
Q Consensus 204 ~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (321)
.......+++.|..+.....++.-|.++-....+..-.. .++..+.-.-+ -+|...|--=.+..|...|..+++++.
T Consensus 132 eGWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~-VdG~lyANVw~t~~I~rI~p~sGrV~~ 210 (262)
T COG3823 132 EGWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEW-VDGELYANVWQTTRIARIDPDSGRVVA 210 (262)
T ss_pred cceeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceee-eccEEEEeeeeecceEEEcCCCCcEEE
Confidence 223445566667766666667776765433322221110 11111110101 134444433333334444445554433
Q ss_pred Ee------------cCCCCCeEEEEecCCC-ceEEEE
Q 020798 282 KL------------EGHTDPVISVASHPTE-NIIASG 305 (321)
Q Consensus 282 ~~------------~~h~~~v~~~~~~p~~-~~l~s~ 305 (321)
-+ ..|.+-.+.+++.|++ +++++|
T Consensus 211 widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 211 WIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred EEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 22 2244567889999997 667775
No 415
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=95.28 E-value=0.53 Score=40.23 Aligned_cols=160 Identities=16% Similarity=0.149 Sum_probs=90.7
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce-eeeeccCCCC----CeE-EEEEccCCCEEEEEecCCeEEE
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC-MKTLIDDENP----PVS-FVKFSPNGKFILVGTLDNTLRL 226 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~----~~~-~~~~~~~g~~l~~~~~d~~i~i 226 (321)
+......+..+-..|+++.+..-+. ..+.++++.+... .+++...... .+. ....-..|.-+.+++.||-|.-
T Consensus 216 L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQ 294 (733)
T COG4590 216 LSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQ 294 (733)
T ss_pred cCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceee
Confidence 4444566778888999998776555 6778888765322 1222222111 111 1112235666788889998877
Q ss_pred E-eCCCC-c----EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCc
Q 020798 227 W-NYSTG-K----ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN 300 (321)
Q Consensus 227 ~-d~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 300 (321)
| |++.+ . .++.++-... .+.......+.+-+++-..+|++.++.-...+.+-.-. -.+...-+++||.+.
T Consensus 295 WFdvr~~~~p~l~h~R~f~l~pa---~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~-~~~~~~~~~~Sp~~~ 370 (733)
T COG4590 295 WFDVRRDGQPHLNHIRNFKLAPA---EVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER-AYQAPQLVAMSPNQA 370 (733)
T ss_pred eeeeecCCCCcceeeeccccCcc---cceeeccccccceEEEEcCCCceeeeecccCcceehhh-hhcCcceeeeCcccc
Confidence 7 54432 1 1222221111 12222223344567777888998887754444332111 223456688999999
Q ss_pred eEEEEeecCCccEEEccccc
Q 020798 301 IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~~ 320 (321)
+|++- | .|.|+++.+++
T Consensus 371 ~Ll~e--~-~gki~~~~l~N 387 (733)
T COG4590 371 YLLSE--D-QGKIRLAQLEN 387 (733)
T ss_pred hheee--c-CCceEEEEecC
Confidence 99873 3 46788888765
No 416
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=95.28 E-value=2.7 Score=39.62 Aligned_cols=153 Identities=16% Similarity=0.230 Sum_probs=87.6
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcccE-------------EEEEECC--CCCEEEEeeC----------CCcE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV-------------FCVNFNP--QSNMIVSGAF----------DETV 139 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-------------~~~~~~~--~~~~l~~~~~----------dg~i 139 (321)
+..++.++.|+.+.-.|.++++....+.. ...+ ..+.-.| .++.++.++. +|.|
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I 338 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI 338 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence 44788888999999999999887654321 1111 0111122 1345665542 6889
Q ss_pred EEEecCCCEEEEEEeCC---------C--------CCe-eEEEEccCCCEEEEEe------------------CCCeEEE
Q 020798 140 RIWDVKTGKCLKVLPAH---------S--------DPV-TAVDFNRDGTMIVTSS------------------YDGLCRI 183 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~---------~--------~~v-~~~~~~~~~~~l~~~~------------------~dg~i~~ 183 (321)
+-+|.++|+.+-.+..- . ..+ ..+++.+....++... ..+.+.-
T Consensus 339 ~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvA 418 (764)
T TIGR03074 339 RAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVA 418 (764)
T ss_pred EEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEE
Confidence 99999999877554311 0 011 2344555444444321 1234555
Q ss_pred EeCCCCceeeeecc-CCC-------CCeEEEEEcc-CCC---EEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 184 WDASTGHCMKTLID-DEN-------PPVSFVKFSP-NGK---FILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 184 ~d~~~~~~~~~~~~-~~~-------~~~~~~~~~~-~g~---~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
.|.++++..-.+.. .+. ....-+.+.. +|+ .++.++.+|.+.++|.++++++...
T Consensus 419 LD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 419 LDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred EeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 67777765543322 110 1112223333 553 6888899999999999999877653
No 417
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=95.24 E-value=1.2 Score=40.52 Aligned_cols=107 Identities=18% Similarity=0.318 Sum_probs=69.0
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCcceeeee-ecCcccEEEEEEC--CCCCEEEEeeCCCcEEEEecCC------C-
Q 020798 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL-IGHTNYVFCVNFN--PQSNMIVSGAFDETVRIWDVKT------G- 147 (321)
Q Consensus 78 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~~wd~~~------~- 147 (321)
-+.-+.-++..++-+...++.|||...+...... ....+.|..+.|. |+++.+++.+....|.+|--.. +
T Consensus 34 li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p 113 (631)
T PF12234_consen 34 LISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGP 113 (631)
T ss_pred eEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCc
Confidence 3444445555555555567999999887643322 2446778899985 6788898889999999885311 1
Q ss_pred --EEEEE--EeCCC-CCeeEEEEccCCCEEEEEeCCCeEEEEeC
Q 020798 148 --KCLKV--LPAHS-DPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186 (321)
Q Consensus 148 --~~~~~--~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~d~ 186 (321)
..+.. +..+. .+|.+..|.++|..++.++ +.+.++|-
T Consensus 114 ~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 114 SWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred ccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 12222 22333 6789999999997655443 45777764
No 418
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=95.16 E-value=1.4 Score=35.80 Aligned_cols=219 Identities=12% Similarity=0.149 Sum_probs=112.7
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccc-----ccccEEEEEECCCCC------------
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTG-----HEQGVSDLVFSSDSR------------ 86 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~i~~~~~~~~~~------------ 86 (321)
..-+-++|+|.+..-++...-+...+|+...-..... +...+-.+.. .....+.+.|+....
T Consensus 23 ~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~-~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 23 RNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLV-QDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred cccceeEecCCCCEEEecCCcceEEeecCCcccccCC-ccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 3456789999998777777778888998752110000 0000111110 123456666654322
Q ss_pred EEEEEeCCCcEEEEecCCcce-----eeeee-cCcccE-EEEEEC--CCCCEEEEee-CCCcEEEEecCCCEEEE--EE-
Q 020798 87 FLVSASDDKTIRLWDVPTATC-----LKTLI-GHTNYV-FCVNFN--PQSNMIVSGA-FDETVRIWDVKTGKCLK--VL- 153 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~-----~~~~~-~~~~~v-~~~~~~--~~~~~l~~~~-~dg~i~~wd~~~~~~~~--~~- 153 (321)
.++.+++||+|.-|...-... ...+. .....+ ..+++. ..+++|..+. ..++|.++|-.-.+... .+
T Consensus 102 ~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~ 181 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFI 181 (336)
T ss_pred eEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCcc
Confidence 256778999999998532221 11111 111222 344444 3356666554 56889998853222110 01
Q ss_pred ----eCCCCC--ee------EEEE---ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC-CCCCeEEEEEcc------C
Q 020798 154 ----PAHSDP--VT------AVDF---NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD-ENPPVSFVKFSP------N 211 (321)
Q Consensus 154 ----~~~~~~--v~------~~~~---~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~------~ 211 (321)
+..-.+ |. -+.| .++...=+.+..-|.|.+||+.. ..++++... .-.....++..| .
T Consensus 182 DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G-~l~~r~as~g~LNaPWG~a~APa~FG~~s 260 (336)
T TIGR03118 182 DPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNG-QLLRRVASSGRLNAPWGLAIAPESFGSLS 260 (336)
T ss_pred CCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCC-cEEEEeccCCcccCCceeeeChhhhCCCC
Confidence 100011 10 0111 11111122233446889999764 445544221 112234566655 4
Q ss_pred CCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc
Q 020798 212 GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244 (321)
Q Consensus 212 g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 244 (321)
|.+|+---.||+|..||..+++.+..+....+.
T Consensus 261 g~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~ 293 (336)
T TIGR03118 261 GALLVGNFGDGTINAYDPQSGAQLGQLLDPDNH 293 (336)
T ss_pred CCeEEeecCCceeEEecCCCCceeeeecCCCCC
Confidence 566665557999999999999888777655444
No 419
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.14 E-value=1.4 Score=35.48 Aligned_cols=144 Identities=17% Similarity=0.189 Sum_probs=83.7
Q ss_pred cEEEEEECCCCCEEEEec---CCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 25 AISSVKFSHDGRLLASSS---ADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~---~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
.+.+.+.+++|+.+|... ....+.++.... .....+.+ ..+..-.|++++...+....+...+++.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~---------~~~~~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~ 93 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG---------PVRPVLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVVR 93 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC---------cceeeccC--CccccccccCCCCEEEEEcCCCceEEEE
Confidence 688999999999876655 233444432211 01111122 3567778999988777666666666663
Q ss_pred -cCCcceee-eeec--CcccEEEEEECCCCCEEEEee---CCCcEEEEecC---CC------EEEEEEeCCCCCeeEEEE
Q 020798 102 -VPTATCLK-TLIG--HTNYVFCVNFNPQSNMIVSGA---FDETVRIWDVK---TG------KCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 102 -~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~l~~~~---~dg~i~~wd~~---~~------~~~~~~~~~~~~v~~~~~ 165 (321)
...++... .+.. -...|..+.++|||..++.-. .++.|.+=-+. .+ ............+.+++|
T Consensus 94 ~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W 173 (253)
T PF10647_consen 94 DSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAW 173 (253)
T ss_pred ecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeee
Confidence 23332211 1111 112799999999999876544 34666665432 22 111112223457899999
Q ss_pred ccCCCEEEEEeCCC
Q 020798 166 NRDGTMIVTSSYDG 179 (321)
Q Consensus 166 ~~~~~~l~~~~~dg 179 (321)
.+++.+++.+...+
T Consensus 174 ~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 174 SDDSTLVVLGRSAG 187 (253)
T ss_pred cCCCEEEEEeCCCC
Confidence 99998777665443
No 420
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.11 E-value=2.9 Score=39.06 Aligned_cols=83 Identities=17% Similarity=0.256 Sum_probs=54.8
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCC----CCCCCCCcc-cc-------c-ccccccEEEEEECCC---CC
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISN----SDSTPPSPL-QK-------F-TGHEQGVSDLVFSSD---SR 86 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~----~~~~~~~~~-~~-------~-~~h~~~i~~~~~~~~---~~ 86 (321)
.-.|..+.+||+|++||..|..+...+. +-.... .+....... +. + ..+...|..+.|+|. +.
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~-LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGVVVLE-LPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcEEEEE-eccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 4589999999999999999987766654 321100 000001000 00 1 234567889999996 47
Q ss_pred EEEEEeCCCcEEEEecCCcc
Q 020798 87 FLVSASDDKTIRLWDVPTAT 106 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~ 106 (321)
.|+.=..|+.+++||+....
T Consensus 163 ~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 163 HLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred eEEEEecCCEEEEEecCCCC
Confidence 88888999999999996543
No 421
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.05 E-value=0.16 Score=27.72 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=26.3
Q ss_pred CCeeEEEEccCC---CEEEEEeCCCeEEEEeCCCC
Q 020798 158 DPVTAVDFNRDG---TMIVTSSYDGLCRIWDASTG 189 (321)
Q Consensus 158 ~~v~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~ 189 (321)
+++.++.|+|.. .+|+.+-..|.+.++|+++.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 357899999854 48888888999999999964
No 422
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.94 E-value=1.6 Score=35.13 Aligned_cols=145 Identities=13% Similarity=0.150 Sum_probs=83.8
Q ss_pred cEEEEEECCCCCEEEEEe---CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEe-cCCCEEE
Q 020798 75 GVSDLVFSSDSRFLVSAS---DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD-VKTGKCL 150 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd-~~~~~~~ 150 (321)
.+.+.+++++++.++... ....+.++..... ..... ....+..-.|++++...+....+...+++. ..++...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~--~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP--VRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc--ceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 678899999999877655 2334555543322 22221 223566778999977666655566666663 2333221
Q ss_pred -EEEeCC--CCCeeEEEEccCCCEEEEEe---CCCeEEEEeCC---CC--ce---eeeeccCCCCCeEEEEEccCCCEEE
Q 020798 151 -KVLPAH--SDPVTAVDFNRDGTMIVTSS---YDGLCRIWDAS---TG--HC---MKTLIDDENPPVSFVKFSPNGKFIL 216 (321)
Q Consensus 151 -~~~~~~--~~~v~~~~~~~~~~~l~~~~---~dg~i~~~d~~---~~--~~---~~~~~~~~~~~~~~~~~~~~g~~l~ 216 (321)
...... ...|.++.++|||..++... .++.+.+--+. .+ .. ...+.......+..+.|.+++.+++
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V 181 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV 181 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence 112211 12899999999999877654 34666655331 22 11 1112222234678899999998777
Q ss_pred EEecCC
Q 020798 217 VGTLDN 222 (321)
Q Consensus 217 ~~~~d~ 222 (321)
.+...+
T Consensus 182 ~~~~~~ 187 (253)
T PF10647_consen 182 LGRSAG 187 (253)
T ss_pred EeCCCC
Confidence 765433
No 423
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.92 E-value=2.9 Score=38.12 Aligned_cols=71 Identities=18% Similarity=0.257 Sum_probs=46.7
Q ss_pred CeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEc--cCCCEEEEEecCCeEEEEeC
Q 020798 159 PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFS--PNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 159 ~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~l~~~~~d~~i~i~d~ 229 (321)
.+.-+.-+.-++..++-+....+.+||.+.+.......-.....|..+.|. |+|+.+++.+....|.+|.-
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 334444444444444444556899999988764433322345567777665 68999999999999999853
No 424
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.92 E-value=1.4 Score=34.37 Aligned_cols=211 Identities=12% Similarity=0.141 Sum_probs=107.5
Q ss_pred CEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCC---CEEEEeeCCCcEEEEecCCC--EEEEEEeC-----
Q 020798 86 RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS---NMIVSGAFDETVRIWDVKTG--KCLKVLPA----- 155 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~wd~~~~--~~~~~~~~----- 155 (321)
.++..--..+.|.-||+..++..+...... ...++.+--.+ .+.+.++..-.|--||.... ....++..
T Consensus 28 sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p-~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d~ 106 (310)
T KOG4499|consen 28 SLLYVDIEAGEVHRYDIEQNKVYRAKIEGP-PSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQPDR 106 (310)
T ss_pred eEEEEEeccCceehhhhhhhheEEEEEecC-cceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCchH
Confidence 344444555677779887766543322111 12222222111 22333333333445663221 22222111
Q ss_pred CCCCeeEEEEccCCCEEEEEeC----------CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE-ecCCeE
Q 020798 156 HSDPVTAVDFNRDGTMIVTSSY----------DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG-TLDNTL 224 (321)
Q Consensus 156 ~~~~v~~~~~~~~~~~l~~~~~----------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~d~~i 224 (321)
.......-..+|+|+++. |.. .|.++.|-+.. + +..+... -...+.++|+.+.+.+..- +.+-.|
T Consensus 107 kknR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~h-~-v~~i~~~-v~IsNgl~Wd~d~K~fY~iDsln~~V 182 (310)
T KOG4499|consen 107 KKNRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAGH-Q-VELIWNC-VGISNGLAWDSDAKKFYYIDSLNYEV 182 (310)
T ss_pred HhcccccCccCCCCceee-eeeccccccccccccEEEEeccCC-C-ceeeehh-ccCCccccccccCcEEEEEccCceEE
Confidence 123445566789998743 321 23344443221 1 1111111 1123457888777666543 455677
Q ss_pred EEEe--CCCCc-----EEEEEec-----cCCc-eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeE
Q 020798 225 RLWN--YSTGK-----ILKTYTG-----HTNS-KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291 (321)
Q Consensus 225 ~i~d--~~~~~-----~~~~~~~-----~~~~-~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~ 291 (321)
.-|| ..+|. .+..+.. +..+ ..++ ..+|.+.++.-.-++|.-+|..+++.+.+++-....|+
T Consensus 183 ~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~I-----D~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qit 257 (310)
T KOG4499|consen 183 DAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTI-----DTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQIT 257 (310)
T ss_pred eeeecCCCcccccCcceeEEeccCCCcCCCCCCcceE-----ccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceE
Confidence 7777 44442 2322221 1111 1122 23577777777778999999999999999988889999
Q ss_pred EEEecCC--CceEEEEe
Q 020798 292 SVASHPT--ENIIASGA 306 (321)
Q Consensus 292 ~~~~~p~--~~~l~s~~ 306 (321)
+++|--. ..+.+|+.
T Consensus 258 sccFgGkn~d~~yvT~a 274 (310)
T KOG4499|consen 258 SCCFGGKNLDILYVTTA 274 (310)
T ss_pred EEEecCCCccEEEEEeh
Confidence 9999654 23444444
No 425
>PRK10115 protease 2; Provisional
Probab=94.43 E-value=4.3 Score=37.96 Aligned_cols=195 Identities=12% Similarity=0.089 Sum_probs=91.6
Q ss_pred ccEEEEEECCCCCEEEEecCC-----ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC----
Q 020798 24 RAISSVKFSHDGRLLASSSAD-----KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD---- 94 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d---- 94 (321)
-.+..+.+||||++|+.+... ..+.+.++.+... -. ..+.+ .-..++|.+|++.|+....+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~----l~---~~i~~---~~~~~~w~~D~~~~~y~~~~~~~~ 196 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNW----YP---ELLDN---VEPSFVWANDSWTFYYVRKHPVTL 196 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCC----CC---ccccC---cceEEEEeeCCCEEEEEEecCCCC
Confidence 457778999999988865332 2455555532110 00 11111 11458999999877655442
Q ss_pred --CcEEEEecCCcc--eeeeeecCcccEE-EEEECCCCCEEEEee---CCCcEEEEecC--CCEEEEEEeCCCCCeeEEE
Q 020798 95 --KTIRLWDVPTAT--CLKTLIGHTNYVF-CVNFNPQSNMIVSGA---FDETVRIWDVK--TGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 95 --~~i~iwd~~~~~--~~~~~~~~~~~v~-~~~~~~~~~~l~~~~---~dg~i~~wd~~--~~~~~~~~~~~~~~v~~~~ 164 (321)
..|..+++.++. -...+........ ....+.++++++..+ .++.+.+++.. ++.....++........+.
T Consensus 197 ~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (686)
T PRK10115 197 LPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD 276 (686)
T ss_pred CCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE
Confidence 357777887762 2222222222222 333444777655433 34578888842 3332222322222222222
Q ss_pred EccCCCEEEEEeCC-CeEEE--EeCCCCceeeeeccC-CCCCeEEEEEccCCCEEEEEecCCe--EEEEeCC
Q 020798 165 FNRDGTMIVTSSYD-GLCRI--WDASTGHCMKTLIDD-ENPPVSFVKFSPNGKFILVGTLDNT--LRLWNYS 230 (321)
Q Consensus 165 ~~~~~~~l~~~~~d-g~i~~--~d~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~d~~--i~i~d~~ 230 (321)
+..+.+++....+ ...++ .++........+... ....+..+.+. .+.++++...++. +.+++..
T Consensus 277 -~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~ 346 (686)
T PRK10115 277 -HYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRK 346 (686)
T ss_pred -eCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCC
Confidence 3333333333222 23333 344321112233333 22356666665 3334444555665 4555544
No 426
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.42 E-value=4.4 Score=37.93 Aligned_cols=73 Identities=15% Similarity=0.266 Sum_probs=50.8
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCC----------cce--e-eee--------ecCcccEEEEEECCC---CCE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPT----------ATC--L-KTL--------IGHTNYVFCVNFNPQ---SNM 129 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~----------~~~--~-~~~--------~~~~~~v~~~~~~~~---~~~ 129 (321)
-.|..+.++|+|++|+..|..|-+ |-.+.. ++. . +++ ..+...|..+.|+|. +..
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVV-VLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEE-EEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 368899999999999988886643 433321 111 0 111 134457889999996 477
Q ss_pred EEEeeCCCcEEEEecCCC
Q 020798 130 IVSGAFDETVRIWDVKTG 147 (321)
Q Consensus 130 l~~~~~dg~i~~wd~~~~ 147 (321)
|+.-..|+++|+||+...
T Consensus 164 l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDP 181 (717)
T ss_pred EEEEecCCEEEEEecCCC
Confidence 888889999999999653
No 427
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=94.42 E-value=1.1 Score=38.68 Aligned_cols=82 Identities=10% Similarity=0.288 Sum_probs=52.9
Q ss_pred CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC-----------------CCEEEE-Ee
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN-----------------GKFILV-GT 219 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------g~~l~~-~~ 219 (321)
..+.++..+|.+++.++...=|.|.++|+.++..++-+..-.+..+..+..... ..+|+. +-
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyap 387 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAP 387 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEec
Confidence 457889999999988888888999999998876555443322222222211111 112332 44
Q ss_pred cCCeEEEEeCCCCcEEEEEe
Q 020798 220 LDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 220 ~d~~i~i~d~~~~~~~~~~~ 239 (321)
.-|.|.||+++.+..+..+.
T Consensus 388 rRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 388 RRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred cCCeEEEEecCCCCEEEEEE
Confidence 57789999998888777664
No 428
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=94.37 E-value=0.21 Score=27.24 Aligned_cols=30 Identities=23% Similarity=0.524 Sum_probs=25.3
Q ss_pred cEEEEEECCCC---CEEEEeeCCCcEEEEecCC
Q 020798 117 YVFCVNFNPQS---NMIVSGAFDETVRIWDVKT 146 (321)
Q Consensus 117 ~v~~~~~~~~~---~~l~~~~~dg~i~~wd~~~ 146 (321)
.+.++.|+|++ .+|+.+-..|.+.++|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 57899999854 4788888889999999985
No 429
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.24 E-value=0.44 Score=37.27 Aligned_cols=62 Identities=18% Similarity=0.357 Sum_probs=47.5
Q ss_pred cCCeEEEEeCCCCeEEEEEcccceEEEE-------ec-------CCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQSRKVVQK-------LE-------GHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~-------~~-------~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.++.+|++-+.+|.+++||+.+++.+.. +. .....|..+.++.+|.-+++-+ +|..+.|+.+
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls---ng~~y~y~~~ 95 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS---NGDSYSYSPD 95 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe---CCCEEEeccc
Confidence 4678899999999999999998875432 12 2446788999999998888765 4678888865
No 430
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=94.19 E-value=3 Score=35.10 Aligned_cols=108 Identities=20% Similarity=0.285 Sum_probs=54.4
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcc-cccccccccEEEEEECCC----CCEEEEEeCC-----
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPL-QKFTGHEQGVSDLVFSSD----SRFLVSASDD----- 94 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~-~~~~~h~~~i~~~~~~~~----~~~l~~~~~d----- 94 (321)
..+.|+|.|||+++++- ..|.|.+++...... .....+ ........+...++++|+ +.+.++.+..
T Consensus 3 ~P~~~a~~pdG~l~v~e-~~G~i~~~~~~g~~~---~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAE-RSGRIWVVDKDGSLK---TPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp SEEEEEEETTSCEEEEE-TTTEEEEEETTTEEC---EEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred CceEEEEeCCCcEEEEe-CCceEEEEeCCCcCc---ceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 35689999999887764 489998887222110 000000 122344578899999994 3333333311
Q ss_pred ---CcEEEEecCCc--c-----ee-eeeec---CcccEEEEEECCCCCEEEEeeCC
Q 020798 95 ---KTIRLWDVPTA--T-----CL-KTLIG---HTNYVFCVNFNPQSNMIVSGAFD 136 (321)
Q Consensus 95 ---~~i~iwd~~~~--~-----~~-~~~~~---~~~~v~~~~~~~~~~~l~~~~~d 136 (321)
..|.-|..... . .+ ..+.. .......+.|.|||.++++.+..
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~ 134 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDG 134 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-T
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCC
Confidence 23444444332 1 11 11111 12234569999999766665543
No 431
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=94.18 E-value=1.3 Score=39.32 Aligned_cols=119 Identities=11% Similarity=0.172 Sum_probs=67.6
Q ss_pred CcccEEEEEECCCC----CEEEEecCCceEEEeeccccCCCCCC-----CCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 22 HLRAISSVKFSHDG----RLLASSSADKTLLTYSLSSISNSDST-----PPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 22 h~~~v~~~~~s~~g----~~l~~~~~d~~v~~~~~~~~~~~~~~-----~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
..+-|..+.|+|-+ ..|+...-...|.+|.+......... ..+....+.-. -..+.|+|....|+.-.
T Consensus 55 qFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvL---pQGCVWHPk~~iL~VLT 131 (671)
T PF15390_consen 55 QFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVL---PQGCVWHPKKAILTVLT 131 (671)
T ss_pred ccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccC---CCcccccCCCceEEEEe
Confidence 34568889999853 24444555789999987631110000 00000011111 13467999988776555
Q ss_pred CCCcEEEEecCCc--ceeeeeecCcccEEEEEECCCCCEEEEee-CCCcEEEEec
Q 020798 93 DDKTIRLWDVPTA--TCLKTLIGHTNYVFCVNFNPQSNMIVSGA-FDETVRIWDV 144 (321)
Q Consensus 93 ~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~ 144 (321)
....-.++++... +....+ .-.+.|.|.+|.+||+.|+.+- ..-.-++||-
T Consensus 132 ~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 132 ARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred cCceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence 4443345555332 222233 3567799999999999877653 3334578874
No 432
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=94.17 E-value=2.7 Score=34.63 Aligned_cols=277 Identities=12% Similarity=0.144 Sum_probs=115.8
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...+..+.|..+..-+++|.. +.+.. ............ ...-..-.-....+.|..+ +.+++ +..+ +.+...
T Consensus 16 ~~~l~dV~F~d~~~G~~VG~~-g~il~-T~DGG~tW~~~~---~~~~~~~~~~l~~I~f~~~-~g~iv-G~~g-~ll~T~ 87 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVGAY-GTILK-TTDGGKTWQPVS---LDLDNPFDYHLNSISFDGN-EGWIV-GEPG-LLLHTT 87 (302)
T ss_dssp SS-EEEEEESSSS-EEEEETT-TEEEE-ESSTTSS-EE--------S-----EEEEEEEETT-EEEEE-EETT-EEEEES
T ss_pred CCceEEEEEecCCEEEEEecC-CEEEE-ECCCCccccccc---cCCCccceeeEEEEEecCC-ceEEE-cCCc-eEEEec
Confidence 358889999966666777664 44321 111111000000 0000000123566777543 33444 4444 334444
Q ss_pred CCcceeeeee---cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE-EEeCCCCCeeEEEEccCCCEEEEEeCC
Q 020798 103 PTATCLKTLI---GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK-VLPAHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 103 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
+.++.-..+. ........+....++...+ ++..|.|+. ....++.-+ ........+..+.-+++|++++++...
T Consensus 88 DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l-~~~~G~iy~-T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G 165 (302)
T PF14870_consen 88 DGGKTWERVPLSSKLPGSPFGITALGDGSAEL-AGDRGAIYR-TTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRG 165 (302)
T ss_dssp STTSS-EE----TT-SS-EEEEEEEETTEEEE-EETT--EEE-ESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTS
T ss_pred CCCCCcEEeecCCCCCCCeeEEEEcCCCcEEE-EcCCCcEEE-eCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcc
Confidence 4444333221 1122223333323332333 344454432 112222111 223334667888889999988777666
Q ss_pred CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC-CCCcEEEE-EeccCCceeEEEeEEEecC
Q 020798 179 GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY-STGKILKT-YTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (321)
..+.-||.-...- ..........+..+.|.|++...+++ ..|.|+.=+. ...+.... +.......+.+......++
T Consensus 166 ~~~~s~~~G~~~w-~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~ 243 (302)
T PF14870_consen 166 NFYSSWDPGQTTW-QPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPP 243 (302)
T ss_dssp SEEEEE-TT-SS--EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSS
T ss_pred cEEEEecCCCccc-eEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCC
Confidence 6666777532211 11112234678999999998776644 7788887762 22221111 1111112222222333455
Q ss_pred CeEEEEeCCCCeEEEEEcccceEEEEec---CCCCCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 257 GKYIVSGSEDSCVYLWELQSRKVVQKLE---GHTDPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
++..++|+. |.+ +.....++.=++.+ .-...+..+.|.+..+-+|.| ++|.+--|
T Consensus 244 ~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG---~~G~ll~~ 301 (302)
T PF14870_consen 244 NEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG---QDGVLLRY 301 (302)
T ss_dssp S-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE----STTEEEEE
T ss_pred CCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEEC---CCcEEEEe
Confidence 666666554 444 34555555433332 223457889998778888887 45766544
No 433
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=94.06 E-value=3.1 Score=34.82 Aligned_cols=108 Identities=12% Similarity=0.104 Sum_probs=50.7
Q ss_pred CCCEEEEeeCC-----CcEEEEecCCCEE---EEEEeCCCCCe--eEEEEccCCCEEEEEeC-----CCeEEEEeCCCCc
Q 020798 126 QSNMIVSGAFD-----ETVRIWDVKTGKC---LKVLPAHSDPV--TAVDFNRDGTMIVTSSY-----DGLCRIWDASTGH 190 (321)
Q Consensus 126 ~~~~l~~~~~d-----g~i~~wd~~~~~~---~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~~~ 190 (321)
++..++.|+.+ ..+..+|+.+.+- ...+..-..+. .+++. -++.+++.|+. ...+..||+.+.+
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 34555666654 2466677765542 11221111111 12222 24566666664 2357788887654
Q ss_pred eeeeeccCCCCCeEEEEEccCCCEEEEEecCC----eEEEEeCCCCcE
Q 020798 191 CMKTLIDDENPPVSFVKFSPNGKFILVGTLDN----TLRLWNYSTGKI 234 (321)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~----~i~i~d~~~~~~ 234 (321)
-...................++++.+.|+.++ .+.+||..+.+-
T Consensus 151 W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W 198 (323)
T TIGR03548 151 WFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW 198 (323)
T ss_pred eeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence 22111001111112222334666777777653 356888877553
No 434
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=93.48 E-value=6.3 Score=36.50 Aligned_cols=150 Identities=12% Similarity=0.138 Sum_probs=88.1
Q ss_pred CCEEEEecCCceEEEeeccccCCCCCCC-C-------Cc----cccc--ccccccEEEEEECC--CCCEEEEEeCCCcEE
Q 020798 35 GRLLASSSADKTLLTYSLSSISNSDSTP-P-------SP----LQKF--TGHEQGVSDLVFSS--DSRFLVSASDDKTIR 98 (321)
Q Consensus 35 g~~l~~~~~d~~v~~~~~~~~~~~~~~~-~-------~~----~~~~--~~h~~~i~~~~~~~--~~~~l~~~~~d~~i~ 98 (321)
.++|.++. .+.|.+|+........... . .. .... ..-...|+.|.... ....|+.+.+||.|.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~ 127 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL 127 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence 55666654 7889999876644311100 0 00 0000 00112356665543 446888999999999
Q ss_pred EEecCC-------c----c---------eeeeeecCcccEEEEEEC--CCCCEEEEeeCCCcEEEEecCCC--EE-EEEE
Q 020798 99 LWDVPT-------A----T---------CLKTLIGHTNYVFCVNFN--PQSNMIVSGAFDETVRIWDVKTG--KC-LKVL 153 (321)
Q Consensus 99 iwd~~~-------~----~---------~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~~wd~~~~--~~-~~~~ 153 (321)
+|.++. . . +... ..-...+++++++ ...++||+++....|.||-.... +. ...-
T Consensus 128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~-~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s 206 (717)
T PF08728_consen 128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFH-LRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPS 206 (717)
T ss_pred EEEHHHHHHHHHhhccccccccccccCCCCeE-eecCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccc
Confidence 996521 0 0 0001 1123467889998 77788888888888887754331 11 1111
Q ss_pred eCCCCCeeEEEEccCC---C---EEEEEeCCCeEEEEeC
Q 020798 154 PAHSDPVTAVDFNRDG---T---MIVTSSYDGLCRIWDA 186 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~---~---~l~~~~~dg~i~~~d~ 186 (321)
..+...|.+++|.++. . .+++++-.|.+.+|++
T Consensus 207 ~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 207 HQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred cccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 1255678889987643 2 6778888999888776
No 435
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=93.48 E-value=4.6 Score=34.86 Aligned_cols=192 Identities=14% Similarity=0.180 Sum_probs=88.2
Q ss_pred CCEEEEee-CCCcEEEEecCC----CEEEEEEeC---CC----CCeeEEEEccCCCEEEEEe--C----CCeEEEEeCCC
Q 020798 127 SNMIVSGA-FDETVRIWDVKT----GKCLKVLPA---HS----DPVTAVDFNRDGTMIVTSS--Y----DGLCRIWDAST 188 (321)
Q Consensus 127 ~~~l~~~~-~dg~i~~wd~~~----~~~~~~~~~---~~----~~v~~~~~~~~~~~l~~~~--~----dg~i~~~d~~~ 188 (321)
.++|+..+ .++.|+++|+.+ .+..+.+.. +. .....+-.-|+|+.++++- . -|-+.+.|-++
T Consensus 87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~t 166 (461)
T PF05694_consen 87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGET 166 (461)
T ss_dssp S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT
T ss_pred CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcc
Confidence 45666555 778999999873 344444432 11 1223344568888888752 2 24577788776
Q ss_pred CceeeeeccCCC--CCeEEEEEccCCCEEEEEec--------------------CCeEEEEeCCCCcEEEEEeccCCcee
Q 020798 189 GHCMKTLIDDEN--PPVSFVKFSPNGKFILVGTL--------------------DNTLRLWNYSTGKILKTYTGHTNSKY 246 (321)
Q Consensus 189 ~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~--------------------d~~i~i~d~~~~~~~~~~~~~~~~~~ 246 (321)
.+.......... ..-..+.+.|..+.++++.. ..++.+||+.+.+.++.+.-......
T Consensus 167 f~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~ 246 (461)
T PF05694_consen 167 FEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQM 246 (461)
T ss_dssp --EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEE
T ss_pred ccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCc
Confidence 655554433222 22345677888887777542 24699999999999998865433333
Q ss_pred EEEeEEE-ecC-CeEEEEeCCCCeEEEE-Ecccce----EEEEecC-----C------------CCCeEEEEecCCCceE
Q 020798 247 CISSTFS-VTN-GKYIVSGSEDSCVYLW-ELQSRK----VVQKLEG-----H------------TDPVISVASHPTENII 302 (321)
Q Consensus 247 ~~~~~~~-~~~-~~~l~~~~~dg~i~vw-d~~~~~----~~~~~~~-----h------------~~~v~~~~~~p~~~~l 302 (321)
.+...|. .++ ..-++.+....+|..| ....++ .+..+.. - ..=|+++..|.|.++|
T Consensus 247 pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfL 326 (461)
T PF05694_consen 247 PLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFL 326 (461)
T ss_dssp EEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EE
T ss_pred eEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEE
Confidence 3333332 222 2233333344444433 323332 1111111 0 1236899999999998
Q ss_pred EEEeecCCccEEEcccc
Q 020798 303 ASGALDNDRTVKIWTQE 319 (321)
Q Consensus 303 ~s~~~d~~~~i~iw~~~ 319 (321)
-....- .|.|+-||+.
T Consensus 327 Yvs~W~-~GdvrqYDIS 342 (461)
T PF05694_consen 327 YVSNWL-HGDVRQYDIS 342 (461)
T ss_dssp EEEETT-TTEEEEEE-S
T ss_pred EEEccc-CCcEEEEecC
Confidence 877663 5889999875
No 436
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=93.43 E-value=3.4 Score=33.18 Aligned_cols=197 Identities=12% Similarity=0.087 Sum_probs=117.6
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
..-..++-.|||..-+++...+.|--.|..+++....-.+....-..+...||+..-++-+.. -|.-.|-++.+. ..+
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~ev-t~f 139 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEV-TRF 139 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccce-EEe
Confidence 345678889999888888888888888888888665555566666788889998766654333 455566555442 222
Q ss_pred e----CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 154 P----AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 154 ~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
+ ..........|.+.|++-+++.. |..--.|...+ .++.+..........++..|+|..-++.-.++.|-..|.
T Consensus 140 ~lp~~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa~~-~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiaridp 217 (353)
T COG4257 140 PLPLEHADANLETAVFDPWGNLWFTGQI-GAYGRLDPARN-VISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARIDP 217 (353)
T ss_pred ecccccCCCcccceeeCCCccEEEeecc-ccceecCcccC-ceeeeccCCCCCCcceEECCCCcEEEEeccccceEEccc
Confidence 2 22345677889999987777642 11111111111 122222223344566888999998888777888888887
Q ss_pred CCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 230 STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
.++... .+.............+..+-|+.-++-...+.+.-||-.
T Consensus 218 ~~~~ae-v~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs 262 (353)
T COG4257 218 FAGHAE-VVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPS 262 (353)
T ss_pred ccCCcc-eecCCCcccccccccccCccCcEEEeccCCceeeEeCcc
Confidence 766322 222111111112223444556666666666667666654
No 437
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=93.14 E-value=0.23 Score=45.90 Aligned_cols=130 Identities=13% Similarity=0.150 Sum_probs=62.7
Q ss_pred CcEEEEecCCcce-eeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecC--CCEEEE-----EEeCCCCCeeEEEE
Q 020798 95 KTIRLWDVPTATC-LKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVK--TGKCLK-----VLPAHSDPVTAVDF 165 (321)
Q Consensus 95 ~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~--~~~~~~-----~~~~~~~~v~~~~~ 165 (321)
+-+++-+..+... -..+++..+.+-.+.|.... ..+. -.-|.+.|||+. .|+... ........+.-+.|
T Consensus 111 ~~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~w 188 (1283)
T KOG1916|consen 111 NGVRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSW 188 (1283)
T ss_pred hhhhhccCcchhHHHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeee
Confidence 4455555443321 01124455556666664321 1111 233667888864 333222 22223344455666
Q ss_pred cc---CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEE-----------EEEccCCCEEEEEecCCeEEEEe
Q 020798 166 NR---DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSF-----------VKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 166 ~~---~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~-----------~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
.| +..++..+-.++.+++........ .++..|...+.. ...+|||..++.+..||.+++|.
T Consensus 189 cp~~~~~~~ic~~~~~~~i~lL~~~ra~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Q 263 (1283)
T KOG1916|consen 189 CPIAVNKVYICYGLKGGEIRLLNINRALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQ 263 (1283)
T ss_pred cccccccceeeeccCCCceeEeeechHHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceee
Confidence 65 444555666778888766543211 222223222221 23566777776666676666665
No 438
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=93.04 E-value=1.3 Score=34.74 Aligned_cols=67 Identities=15% Similarity=0.378 Sum_probs=47.6
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeee------cc-------CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTL------ID-------DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~------~~-------~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~ 231 (321)
+..++.++++.+.+|.+++||+.+.+.+... .. .....|..+.++.+|.-+++ -.+|....|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~-lsng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVT-LSNGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEE-EeCCCEEEecccc
Confidence 4456788999999999999999887654322 22 23456778888888876655 4467788888654
Q ss_pred C
Q 020798 232 G 232 (321)
Q Consensus 232 ~ 232 (321)
+
T Consensus 97 ~ 97 (219)
T PF07569_consen 97 G 97 (219)
T ss_pred c
Confidence 3
No 439
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=92.99 E-value=0.015 Score=49.56 Aligned_cols=147 Identities=16% Similarity=0.238 Sum_probs=96.2
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEE-EEEeCCCcEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFL-VSASDDKTIRL 99 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l-~~~~~d~~i~i 99 (321)
.|...-....|-|++.-++.+..+..+..||..+....+.. ..+...+++|..++..+ +.+-..+.+.+
T Consensus 32 aalv~pi~~~w~~e~~nlavaca~tiv~~YD~agq~~le~n----------~tg~aldm~wDkegdvlavlAek~~piyl 101 (615)
T KOG2247|consen 32 AALVGPIIHRWRPEGHNLAVACANTIVIYYDKAGQVILELN----------PTGKALDMAWDKEGDVLAVLAEKTGPIYL 101 (615)
T ss_pred hhccccceeeEecCCCceehhhhhhHHHhhhhhcceecccC----------CchhHhhhhhccccchhhhhhhcCCCeee
Confidence 34445556778888877888888999998876543221111 12334567788777654 45667789999
Q ss_pred EecCCcce--eeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC
Q 020798 100 WDVPTATC--LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY 177 (321)
Q Consensus 100 wd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 177 (321)
||+.+... +..-..|.... +.|++....++.+...|.+.+++..+.+.....-.|...++++++.+.+. .+.++.
T Consensus 102 wd~n~eytqqLE~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dc 178 (615)
T KOG2247|consen 102 WDVNSEYTQQLESGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDC 178 (615)
T ss_pred chhhhhhHHHHhccCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCc
Confidence 99866432 11111122222 56788777888888899999999877665555555888899999988764 444444
Q ss_pred CCe
Q 020798 178 DGL 180 (321)
Q Consensus 178 dg~ 180 (321)
|..
T Consensus 179 d~~ 181 (615)
T KOG2247|consen 179 DNT 181 (615)
T ss_pred HHH
Confidence 443
No 440
>PLN02193 nitrile-specifier protein
Probab=92.88 E-value=6.5 Score=34.95 Aligned_cols=149 Identities=11% Similarity=0.115 Sum_probs=70.3
Q ss_pred CCEEEEeeCC-----CcEEEEecCCCEEEEEEeCC--CCC--eeEEEEccCCCEEEEEeCCC-----eEEEEeCCCCcee
Q 020798 127 SNMIVSGAFD-----ETVRIWDVKTGKCLKVLPAH--SDP--VTAVDFNRDGTMIVTSSYDG-----LCRIWDASTGHCM 192 (321)
Q Consensus 127 ~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~--~~~--v~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~ 192 (321)
+..++.|+.+ ..+..||+.+.+-...-+.. ..+ -.+++ .-++.+++.|+.++ .+..||+.+.+-.
T Consensus 229 ~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~-~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~ 307 (470)
T PLN02193 229 STLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMA-ADEENVYVFGGVSATARLKTLDSYNIVDKKWF 307 (470)
T ss_pred CEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEE-EECCEEEEECCCCCCCCcceEEEEECCCCEEE
Confidence 4555666654 35778888776432211110 111 11222 22455666676543 4667777654322
Q ss_pred eeeccC--CCCCeEEEEEccCCCEEEEEecC----CeEEEEeCCCCcEEEEEec-c-CCceeEEEeEEEecCCeEEEEeC
Q 020798 193 KTLIDD--ENPPVSFVKFSPNGKFILVGTLD----NTLRLWNYSTGKILKTYTG-H-TNSKYCISSTFSVTNGKYIVSGS 264 (321)
Q Consensus 193 ~~~~~~--~~~~~~~~~~~~~g~~l~~~~~d----~~i~i~d~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~ 264 (321)
...... ...........-+++.++.++.+ ..+.+||+.+.+....... . ..+...... ...++.+++.|+
T Consensus 308 ~~~~~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~--~~~~~~iyv~GG 385 (470)
T PLN02193 308 HCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFAS--AAVGKHIVIFGG 385 (470)
T ss_pred eCCCCCCCCCCCCCcEEEEECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEE--EEECCEEEEECC
Confidence 110000 00000111112356777777654 4689999887654332211 0 011111111 123567777777
Q ss_pred CC--------------CeEEEEEcccce
Q 020798 265 ED--------------SCVYLWELQSRK 278 (321)
Q Consensus 265 ~d--------------g~i~vwd~~~~~ 278 (321)
.. ..+.+||+.+.+
T Consensus 386 ~~~~~~~~~~~~~~~~ndv~~~D~~t~~ 413 (470)
T PLN02193 386 EIAMDPLAHVGPGQLTDGTFALDTETLQ 413 (470)
T ss_pred ccCCccccccCccceeccEEEEEcCcCE
Confidence 53 247788887654
No 441
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=92.80 E-value=5.2 Score=33.59 Aligned_cols=112 Identities=10% Similarity=0.194 Sum_probs=62.3
Q ss_pred CcccEEEEEECCCCCEEEEecCCce------EEEeeccccCC-CCCCCCCccccccccc--------ccEEEEEECCCCC
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKT------LLTYSLSSISN-SDSTPPSPLQKFTGHE--------QGVSDLVFSSDSR 86 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~------v~~~~~~~~~~-~~~~~~~~~~~~~~h~--------~~i~~~~~~~~~~ 86 (321)
..++++.+.+.|++..+++.+.++. +..+.+..... ...........+..-. ...-+|++.+++.
T Consensus 18 ~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~ 97 (326)
T PF13449_consen 18 PFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS 97 (326)
T ss_pred ccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence 4568899999976666666666776 54444432100 0000000000111111 1344678877888
Q ss_pred EEEEEeCC------CcEEEEecCCcceeeee---------------ecCcccEEEEEECCCCCEEEEee
Q 020798 87 FLVSASDD------KTIRLWDVPTATCLKTL---------------IGHTNYVFCVNFNPQSNMIVSGA 134 (321)
Q Consensus 87 ~l~~~~~d------~~i~iwd~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~ 134 (321)
++++.-.+ ..|..++.. ++....+ ...+...-.++++|+|+.|+++.
T Consensus 98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~ 165 (326)
T PF13449_consen 98 FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM 165 (326)
T ss_pred EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence 87776666 678888765 4433222 12344578999999999666654
No 442
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=92.78 E-value=6 Score=34.32 Aligned_cols=148 Identities=13% Similarity=0.149 Sum_probs=81.5
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC----CCCEEEEEeCCCcEEEEecCCc--c-
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS----DSRFLVSASDDKTIRLWDVPTA--T- 106 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~----~~~~l~~~~~d~~i~iwd~~~~--~- 106 (321)
+...|++||..|.+++|+...... .+. .+..-..-+.+|-.+..-+ .....++.-.-..+.+|.+... .
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~---~~~-~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~ 111 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEF---QPE-DLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTV 111 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCC---CCc-cEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCc
Confidence 346899999999999997633211 111 1111122345666665432 1222222344566777776211 1
Q ss_pred ------eeeeeecCc--ccEEEEEECC----C-CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEE
Q 020798 107 ------CLKTLIGHT--NYVFCVNFNP----Q-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 107 ------~~~~~~~~~--~~v~~~~~~~----~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
.+..+..|. .....+++-| . ..++..-+.||.+.+|+-+.-.....++. .--...+.|.+..+.|+
T Consensus 112 ~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfv 190 (418)
T PF14727_consen 112 EHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFV 190 (418)
T ss_pred ccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEE
Confidence 112222222 1223333322 2 35677789999999998654433333332 11123467888888899
Q ss_pred EEeCCCeEEEEeC
Q 020798 174 TSSYDGLCRIWDA 186 (321)
Q Consensus 174 ~~~~dg~i~~~d~ 186 (321)
+++.+..+..|..
T Consensus 191 t~sss~~l~~Yky 203 (418)
T PF14727_consen 191 TASSSWTLECYKY 203 (418)
T ss_pred EecCceeEEEecH
Confidence 9998888888754
No 443
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=92.70 E-value=0.92 Score=38.87 Aligned_cols=159 Identities=13% Similarity=0.122 Sum_probs=87.0
Q ss_pred ccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeee-ee-c-Cc---ccEE-EEEECCCCCEEEEeeCCCcEEEE-e
Q 020798 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKT-LI-G-HT---NYVF-CVNFNPQSNMIVSGAFDETVRIW-D 143 (321)
Q Consensus 72 h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~-~-~~---~~v~-~~~~~~~~~~l~~~~~dg~i~~w-d 143 (321)
....+..+-..|||+.+..-+. .++.++++.+...... +. . .. ..|. .+..-..|..++....||.|.-| |
T Consensus 219 ~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFd 297 (733)
T COG4590 219 PFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFD 297 (733)
T ss_pred CccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeee
Confidence 3455677888999998876544 6788888866542211 10 0 00 0011 11112234557778888888766 5
Q ss_pred cCCCE-----EEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE
Q 020798 144 VKTGK-----CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218 (321)
Q Consensus 144 ~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 218 (321)
.+.+. .++.++....++..+.-..+.+-+++-+..|++.++.....+..... ..-..+..++++|.+.++++-
T Consensus 298 vr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~--~~~~~~~~~~~Sp~~~~Ll~e 375 (733)
T COG4590 298 VRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFE--RAYQAPQLVAMSPNQAYLLSE 375 (733)
T ss_pred eecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehh--hhhcCcceeeeCcccchheee
Confidence 44322 11222222233333322223345777788888887765443322111 111234568999999988753
Q ss_pred ecCCeEEEEeCCCCcE
Q 020798 219 TLDNTLRLWNYSTGKI 234 (321)
Q Consensus 219 ~~d~~i~i~d~~~~~~ 234 (321)
..|.++++.+.+..+
T Consensus 376 -~~gki~~~~l~Nr~P 390 (733)
T COG4590 376 -DQGKIRLAQLENRNP 390 (733)
T ss_pred -cCCceEEEEecCCCC
Confidence 456799998876543
No 444
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=91.92 E-value=3.8 Score=32.56 Aligned_cols=139 Identities=16% Similarity=0.309 Sum_probs=73.9
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-C--CcEEEEecCCC--EEE-E----EEeCCCCCeeEEEEcc
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-D--ETVRIWDVKTG--KCL-K----VLPAHSDPVTAVDFNR 167 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--g~i~~wd~~~~--~~~-~----~~~~~~~~v~~~~~~~ 167 (321)
.+||+.+++...-.......+.+-.+-+||+.+.+|+. + ..+++++.... .+. . .+.... -=.+..--|
T Consensus 49 ~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~R-WYpT~~~L~ 127 (243)
T PF07250_consen 49 VEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGR-WYPTATTLP 127 (243)
T ss_pred EEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCC-ccccceECC
Confidence 47888877642221222333344456789999988864 2 34777775430 000 0 011111 111234457
Q ss_pred CCCEEEEEeCCC-eEEEEeCCCC--ceee-eeccC-----CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 168 DGTMIVTSSYDG-LCRIWDASTG--HCMK-TLIDD-----ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 168 ~~~~l~~~~~dg-~i~~~d~~~~--~~~~-~~~~~-----~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
||+.++.|+... +.-+|..+.. .... .+... ...-...+...|+|+.++.+..+ -.|||..+.+.++.+
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v~~~l 205 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTVVRTL 205 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeEEeeC
Confidence 899988887764 3445554221 1111 11111 11112356788999998877654 466788877766665
Q ss_pred e
Q 020798 239 T 239 (321)
Q Consensus 239 ~ 239 (321)
.
T Consensus 206 P 206 (243)
T PF07250_consen 206 P 206 (243)
T ss_pred C
Confidence 4
No 445
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=91.62 E-value=5.8 Score=31.55 Aligned_cols=144 Identities=16% Similarity=0.226 Sum_probs=76.3
Q ss_pred EEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-C--CeEEEEeCCCCceeeeec-----cCCCCCeEEEEEccC
Q 020798 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-D--GLCRIWDASTGHCMKTLI-----DDENPPVSFVKFSPN 211 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--g~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 211 (321)
.+||+.+++....-.....-+.+-.+.++|+++.+|+. + ..+++++.........+. .....-......-||
T Consensus 49 ~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~D 128 (243)
T PF07250_consen 49 VEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPD 128 (243)
T ss_pred EEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCC
Confidence 47888776543222222333444567789999988874 3 357888764300000110 011112233556789
Q ss_pred CCEEEEEecCC-eEEEEeCCC--CcEEEE-Eecc---CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec
Q 020798 212 GKFILVGTLDN-TLRLWNYST--GKILKT-YTGH---TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE 284 (321)
Q Consensus 212 g~~l~~~~~d~-~i~i~d~~~--~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 284 (321)
|+.|+.|+... ...+|.... ...... +... .....-.-..+..++|++++.+..+. .|||..+.+.++.+.
T Consensus 129 G~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~lP 206 (243)
T PF07250_consen 129 GRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTLP 206 (243)
T ss_pred CCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeCC
Confidence 99999988764 455555422 111111 1110 01111112344568999998887654 467888877766665
Q ss_pred C
Q 020798 285 G 285 (321)
Q Consensus 285 ~ 285 (321)
.
T Consensus 207 ~ 207 (243)
T PF07250_consen 207 D 207 (243)
T ss_pred C
Confidence 4
No 446
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=91.61 E-value=5.4 Score=35.05 Aligned_cols=135 Identities=19% Similarity=0.249 Sum_probs=77.7
Q ss_pred CCCEEE-EEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-------EEEEEecCCeEEEEeCCC-CcEEEEE
Q 020798 168 DGTMIV-TSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-------FILVGTLDNTLRLWNYST-GKILKTY 238 (321)
Q Consensus 168 ~~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------~l~~~~~d~~i~i~d~~~-~~~~~~~ 238 (321)
+..+++ .++....++-.|+.-|+.+..+..... + .+.|.|..+ .-++|-++..|--.|.+- +..+...
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~dd--v-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~ 554 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDD--V-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVV 554 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCc--c-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeee
Confidence 344443 455556677778888887777644332 2 455666421 123455566666666553 2222211
Q ss_pred eccC-CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 239 TGHT-NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
.... ....-.++.. .....++|+|+..|-|++||--.-+--..+.+...+|..+..+.+|.++.+.+
T Consensus 555 esKdY~tKn~Fss~~-tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC 622 (776)
T COG5167 555 ESKDYKTKNKFSSGM-TTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC 622 (776)
T ss_pred eehhccccccccccc-cccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee
Confidence 1100 0011111111 13456899999999999999644333445677788999999999999876655
No 447
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=91.04 E-value=9.6 Score=32.98 Aligned_cols=154 Identities=11% Similarity=0.028 Sum_probs=0.0
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 152 (321)
.+....+..++++.+++.+..-.-++-||-........-......+..+.+.+++..++++...+.+.--|-........
T Consensus 238 ~Gsf~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~S~d~G~~~~~~~ 317 (398)
T PLN00033 238 TGTFSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYVSKGTGLTEEDFD 317 (398)
T ss_pred ccceeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEEecCCCCcccccc
Q ss_pred EeCCCCC-----eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 153 LPAHSDP-----VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 153 ~~~~~~~-----v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
+..-... +.++.|.+++..+++|...-.++--|--..-...............+.|.++++.+++|. +|.|.-|
T Consensus 318 f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~-~G~il~~ 396 (398)
T PLN00033 318 FEEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRSTDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGN-DGVLLRY 396 (398)
T ss_pred eeecccCCCCcceEEEEEcCCCcEEEEECCCcEEEeCCCCcceeEccccCCCCcceeEEEEcCCCceEEEeC-CcEEEEe
No 448
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=90.68 E-value=4.5 Score=28.59 Aligned_cols=106 Identities=8% Similarity=0.111 Sum_probs=56.9
Q ss_pred EEccCCCEEEEEecCCeEEEEeCCCC--------cEEEEEeccCCceeEEEeEEEe--cCCeEEEEeCCCCeEEEEEccc
Q 020798 207 KFSPNGKFILVGTLDNTLRLWNYSTG--------KILKTYTGHTNSKYCISSTFSV--TNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 207 ~~~~~g~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
+|......|++++..++|.|.+.... ..+..+.- ...+.++..-... .+...|+.|+. ..|..||+..
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNi-n~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~ 82 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNI-NQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVEN 82 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEEC-CCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEccc
Confidence 45555566778888888888876432 22333332 2234444433321 23456777765 4688999987
Q ss_pred ceEEEEecCCCCCeEEEEec---C-CCceEEEEeecCCccEEEccc
Q 020798 277 RKVVQKLEGHTDPVISVASH---P-TENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 277 ~~~~~~~~~h~~~v~~~~~~---p-~~~~l~s~~~d~~~~i~iw~~ 318 (321)
..-+. ++.-.+-|+++.+- . +..+++.|+ +..|.=+|.
T Consensus 83 N~d~F-yke~~DGvn~i~~g~~~~~~~~l~ivGG---ncsi~Gfd~ 124 (136)
T PF14781_consen 83 NSDLF-YKEVPDGVNAIVIGKLGDIPSPLVIVGG---NCSIQGFDY 124 (136)
T ss_pred Cchhh-hhhCccceeEEEEEecCCCCCcEEEECc---eEEEEEeCC
Confidence 65443 22233556666552 1 244555553 344444443
No 449
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=90.67 E-value=1.3 Score=40.69 Aligned_cols=119 Identities=17% Similarity=0.235 Sum_probs=73.7
Q ss_pred cEEEEEEC--CCCCEEEEecCCceEEEeeccccC----CC----CC----CCCCcccccccccccEEEEEEC--CCCCEE
Q 020798 25 AISSVKFS--HDGRLLASSSADKTLLTYSLSSIS----NS----DS----TPPSPLQKFTGHEQGVSDLVFS--SDSRFL 88 (321)
Q Consensus 25 ~v~~~~~s--~~g~~l~~~~~d~~v~~~~~~~~~----~~----~~----~~~~~~~~~~~h~~~i~~~~~~--~~~~~l 88 (321)
.|+.+... -+.+.|+.|..||.|.+|....+. .. .. ....|...+. -......++++ ...++|
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence 34444443 245789999999999999764422 11 00 0111222222 23578899998 778889
Q ss_pred EEEeCCCcEEEEecCCc--ce-eeeeecCcccEEEEEECCCC---C---EEEEeeCCCcEEEEec
Q 020798 89 VSASDDKTIRLWDVPTA--TC-LKTLIGHTNYVFCVNFNPQS---N---MIVSGAFDETVRIWDV 144 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~--~~-~~~~~~~~~~v~~~~~~~~~---~---~l~~~~~dg~i~~wd~ 144 (321)
|+++....|.||-.... +. ...-..+...|.+++|-++. . .+++++-.|.+.+|++
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 98888888888765332 11 11111244557788886543 2 6788899999888877
No 450
>PLN02153 epithiospecifier protein
Probab=90.50 E-value=9.7 Score=32.15 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=31.0
Q ss_pred CCCEEEEEeCC-------CcEEEEecCCcceeeeee-cC--cc---cEEEEEECCCCCEEEEeeCC-----CcEEEEecC
Q 020798 84 DSRFLVSASDD-------KTIRLWDVPTATCLKTLI-GH--TN---YVFCVNFNPQSNMIVSGAFD-----ETVRIWDVK 145 (321)
Q Consensus 84 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~-~~--~~---~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~ 145 (321)
+++.++.|+.+ ..+.+||+.+.+...... +. .. ....+.+ ++..++.|+.+ ..+.+||++
T Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 109 (341)
T PLN02153 32 GDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTV 109 (341)
T ss_pred CCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECC
Confidence 34555666642 257788877654322110 00 00 1111222 34556666643 257788887
Q ss_pred CCE
Q 020798 146 TGK 148 (321)
Q Consensus 146 ~~~ 148 (321)
+.+
T Consensus 110 t~~ 112 (341)
T PLN02153 110 KNE 112 (341)
T ss_pred CCE
Confidence 654
No 451
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=90.30 E-value=3.7 Score=30.74 Aligned_cols=30 Identities=17% Similarity=0.313 Sum_probs=24.0
Q ss_pred cEEEEEECCCC------CEEEEEeCCCcEEEEecCC
Q 020798 75 GVSDLVFSSDS------RFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 75 ~i~~~~~~~~~------~~l~~~~~d~~i~iwd~~~ 104 (321)
.+..++|||.| -.|++-+.++.|.+|....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 68899999954 3677888999999997653
No 452
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.22 E-value=12 Score=32.59 Aligned_cols=152 Identities=13% Similarity=0.199 Sum_probs=84.9
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCcc---eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE---
Q 020798 78 DLVFSSDSRFLVSASDDKTIRLWDVPTAT---CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK--- 151 (321)
Q Consensus 78 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~--- 151 (321)
.+-|....+.|++ ...|.+.=|-..... ++.--....++|.++.|++|++.++.--.+..|.+++....+...
T Consensus 27 gvFfDDaNkqlfa-vrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~ 105 (657)
T KOG2377|consen 27 GVFFDDANKQLFA-VRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYT 105 (657)
T ss_pred ceeeccCcceEEE-EecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHH
Confidence 3445444444443 334445555443221 111112345589999999999999999999999999875443221
Q ss_pred -EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe--cCCeEEEEe
Q 020798 152 -VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT--LDNTLRLWN 228 (321)
Q Consensus 152 -~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~--~d~~i~i~d 228 (321)
..+.....|....|..+ .-++.....| +-+|-....+...+....+...+....|.++.+.++.++ ..+.+.=+.
T Consensus 106 ~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~ 183 (657)
T KOG2377|consen 106 QECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFH 183 (657)
T ss_pred HHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEE
Confidence 12233455888888866 4455444444 444443222111222334456688888999887765544 344455455
Q ss_pred CCCC
Q 020798 229 YSTG 232 (321)
Q Consensus 229 ~~~~ 232 (321)
++++
T Consensus 184 ~~~~ 187 (657)
T KOG2377|consen 184 FRAG 187 (657)
T ss_pred Eeec
Confidence 4443
No 453
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=89.95 E-value=11 Score=31.89 Aligned_cols=42 Identities=12% Similarity=0.155 Sum_probs=20.7
Q ss_pred eEEEEEcccceEEEEecCCCCCe-EEEEecCCCceEEEEeecCC
Q 020798 268 CVYLWELQSRKVVQKLEGHTDPV-ISVASHPTENIIASGALDND 310 (321)
Q Consensus 268 ~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~p~~~~l~s~~~d~~ 310 (321)
.+.+||..+.+-. .+.....+. ...+..-++++++.|+.+.+
T Consensus 291 ~~e~yd~~~~~W~-~~~~lp~~~~~~~~~~~~~~iyv~GG~~~~ 333 (346)
T TIGR03547 291 SSEVYALDNGKWS-KVGKLPQGLAYGVSVSWNNGVLLIGGENSG 333 (346)
T ss_pred EeeEEEecCCccc-ccCCCCCCceeeEEEEcCCEEEEEeccCCC
Confidence 4668887654321 111111111 22233446888888886543
No 454
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=89.82 E-value=11 Score=31.73 Aligned_cols=230 Identities=18% Similarity=0.233 Sum_probs=111.6
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecCCcce---eeee----ecCcccEEEEEECCC---CCEEEEeeC-C--------
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATC---LKTL----IGHTNYVFCVNFNPQ---SNMIVSGAF-D-------- 136 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~----~~~~~~v~~~~~~~~---~~~l~~~~~-d-------- 136 (321)
...|+|.|+|+++++ ...|.|++++ ..+.. +..+ .........++++|+ ..+|..... .
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~ 81 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND 81 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence 578999999987665 5699999999 33332 2221 123345789999994 334433322 1
Q ss_pred CcEEEEecCCC--E------EEEEEeC---CCCCeeEEEEccCCCEEEEEeCCCe-------------EEEEeCCCCcee
Q 020798 137 ETVRIWDVKTG--K------CLKVLPA---HSDPVTAVDFNRDGTMIVTSSYDGL-------------CRIWDASTGHCM 192 (321)
Q Consensus 137 g~i~~wd~~~~--~------~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~-------------i~~~d~~~~~~~ 192 (321)
..|.-|....+ . .+..++. ....-..+.|.|++.++++.+..+. |.-.+.. +...
T Consensus 82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G~~p 160 (331)
T PF07995_consen 82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-GSIP 160 (331)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-SSB-
T ss_pred eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc-CcCC
Confidence 23444444333 1 1112232 2334567999999977666554332 1111211 1100
Q ss_pred -------------eeeccCCCCCeEEEEEccC-CCEEEEE-ecCC--eEEEEeCC--------C------C---------
Q 020798 193 -------------KTLIDDENPPVSFVKFSPN-GKFILVG-TLDN--TLRLWNYS--------T------G--------- 232 (321)
Q Consensus 193 -------------~~~~~~~~~~~~~~~~~~~-g~~l~~~-~~d~--~i~i~d~~--------~------~--------- 232 (321)
..+.... .....++|+|. |+++++= +.+. .|.+.... . +
T Consensus 161 ~dnP~~~~~~~~~~i~A~Gl-RN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~~ 239 (331)
T PF07995_consen 161 ADNPFVGDDGADSEIYAYGL-RNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPSC 239 (331)
T ss_dssp TTSTTTTSTTSTTTEEEE---SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS-
T ss_pred CCCccccCCCceEEEEEeCC-CccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccCC
Confidence 0000000 12346889998 6655442 2222 23332110 0 0
Q ss_pred ----cEEEEEeccCCceeEEEeEEEe------cCCeEEEEeCCCCeEEEEEcccceEEE---E-ecCCCCCeEEEEecCC
Q 020798 233 ----KILKTYTGHTNSKYCISSTFSV------TNGKYIVSGSEDSCVYLWELQSRKVVQ---K-LEGHTDPVISVASHPT 298 (321)
Q Consensus 233 ----~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~dg~i~vwd~~~~~~~~---~-~~~h~~~v~~~~~~p~ 298 (321)
.++..+..|.. .....+.. -.+.++++.-..+.|....+.....+. . +.....++.++++.||
T Consensus 240 ~~~~~P~~~~~~~~a---p~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pD 316 (331)
T PF07995_consen 240 PGFVPPVFAYPPHSA---PTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPD 316 (331)
T ss_dssp TTS---SEEETTT-----EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETT
T ss_pred CCcCccceeecCccc---cCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCC
Confidence 01122222211 11222221 246777777777788888876443221 1 2344558999999999
Q ss_pred CceEEEEeecCCccEE
Q 020798 299 ENIIASGALDNDRTVK 314 (321)
Q Consensus 299 ~~~l~s~~~d~~~~i~ 314 (321)
|.++++-. .+|.|.
T Consensus 317 G~Lyv~~d--~~G~iy 330 (331)
T PF07995_consen 317 GALYVSDD--SDGKIY 330 (331)
T ss_dssp SEEEEEE---TTTTEE
T ss_pred CeEEEEEC--CCCeEe
Confidence 99988754 456653
No 455
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=89.68 E-value=12 Score=32.08 Aligned_cols=13 Identities=8% Similarity=0.100 Sum_probs=8.8
Q ss_pred cCCCceEEEEeec
Q 020798 296 HPTENIIASGALD 308 (321)
Q Consensus 296 ~p~~~~l~s~~~d 308 (321)
.-++.+++.|+..
T Consensus 341 ~~~~~iyv~GG~~ 353 (376)
T PRK14131 341 SWNNGVLLIGGET 353 (376)
T ss_pred EeCCEEEEEcCCC
Confidence 3457788888754
No 456
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=89.43 E-value=1.9 Score=22.78 Aligned_cols=28 Identities=7% Similarity=0.285 Sum_probs=17.7
Q ss_pred cccEEEEEECCCCCEEEEE-eCC--CcEEEE
Q 020798 73 EQGVSDLVFSSDSRFLVSA-SDD--KTIRLW 100 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~-~~d--~~i~iw 100 (321)
...-....|+|||+.|+-+ ..+ |...||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3455678999999988754 444 555554
No 457
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=89.43 E-value=2.2 Score=38.73 Aligned_cols=79 Identities=32% Similarity=0.421 Sum_probs=43.7
Q ss_pred CCCCEEEEecCCceEEEeeccccCCCCC------CCCC----ccccc--------ccccccEEEEEECC----CCCEEEE
Q 020798 33 HDGRLLASSSADKTLLTYSLSSISNSDS------TPPS----PLQKF--------TGHEQGVSDLVFSS----DSRFLVS 90 (321)
Q Consensus 33 ~~g~~l~~~~~d~~v~~~~~~~~~~~~~------~~~~----~~~~~--------~~h~~~i~~~~~~~----~~~~l~~ 90 (321)
++...++.+..||.+............. .... .+..+ .........++++. +..+|++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4667788888899888776654210000 0000 00000 01123455566666 6779999
Q ss_pred EeCCCcEEEEecCCcceeeee
Q 020798 91 ASDDKTIRLWDVPTATCLKTL 111 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~ 111 (321)
-+.|+.+|+||+.+++++...
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEe
Confidence 999999999999999885543
No 458
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=89.19 E-value=15 Score=32.37 Aligned_cols=53 Identities=15% Similarity=0.258 Sum_probs=35.1
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEEecCCCEE--EEEEe-----CCCCCeeEEEEccCC
Q 020798 117 YVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC--LKVLP-----AHSDPVTAVDFNRDG 169 (321)
Q Consensus 117 ~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--~~~~~-----~~~~~v~~~~~~~~~ 169 (321)
..+.++|.|+++.|++--..|.|++++..++.. +..++ ........++++|+-
T Consensus 31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 457889999998777654469999997654432 21111 124557889999874
No 459
>PRK13684 Ycf48-like protein; Provisional
Probab=89.15 E-value=13 Score=31.45 Aligned_cols=156 Identities=12% Similarity=0.108 Sum_probs=81.5
Q ss_pred CCCeeEEEEccCCCEEEEEeCCCeEEE-EeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEE
Q 020798 157 SDPVTAVDFNRDGTMIVTSSYDGLCRI-WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL 235 (321)
Q Consensus 157 ~~~v~~~~~~~~~~~l~~~~~dg~i~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~ 235 (321)
...+..+.+.|++..+ ..+..|.+.. +|- .++.-..........+..+.+.++++.++++ ..|.+.+=....+..-
T Consensus 172 ~g~~~~i~~~~~g~~v-~~g~~G~i~~s~~~-gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW 248 (334)
T PRK13684 172 AGVVRNLRRSPDGKYV-AVSSRGNFYSTWEP-GQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESW 248 (334)
T ss_pred cceEEEEEECCCCeEE-EEeCCceEEEEcCC-CCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcc
Confidence 3467888999987655 4444555432 221 2222222223334567888899999876654 4566543223333322
Q ss_pred EEEeccCC-ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec---CCCCCeEEEEecCCCceEEEEeecCCc
Q 020798 236 KTYTGHTN-SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE---GHTDPVISVASHPTENIIASGALDNDR 311 (321)
Q Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~s~~~d~~~ 311 (321)
........ ....+......+++..++ ++.+|.+. .....++.-.... .-......+.|..+++.+++|. .|
T Consensus 249 ~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~G 323 (334)
T PRK13684 249 SKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLGQ---RG 323 (334)
T ss_pred ccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEECC---Cc
Confidence 22111100 111122222334556555 44567654 3444444322222 2234578888888888888873 57
Q ss_pred cEEEccccc
Q 020798 312 TVKIWTQEK 320 (321)
Q Consensus 312 ~i~iw~~~~ 320 (321)
.|--|+-..
T Consensus 324 ~il~~~~~~ 332 (334)
T PRK13684 324 VLLRYVGSA 332 (334)
T ss_pred eEEEecCCC
Confidence 887776544
No 460
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.10 E-value=14 Score=32.07 Aligned_cols=152 Identities=11% Similarity=0.141 Sum_probs=86.3
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCccee
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL 108 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 108 (321)
+-|...++ .+.+...|.+.-|-..... +.-++......+++|.++.|++|.+.||.--.+.+|.+++....+..
T Consensus 28 vFfDDaNk-qlfavrSggatgvvvkgpn-----dDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~ 101 (657)
T KOG2377|consen 28 VFFDDANK-QLFAVRSGGATGVVVKGPN-----DDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQ 101 (657)
T ss_pred eeeccCcc-eEEEEecCCeeEEEEeCCC-----CCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchh
Confidence 44443333 3333445556666554322 11122222345679999999999999999999999999987332221
Q ss_pred ----eeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccCCCEEEEEe--CCCeE
Q 020798 109 ----KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRDGTMIVTSS--YDGLC 181 (321)
Q Consensus 109 ----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i 181 (321)
...+..+..|....|... ..++.-...| +-+|..... +.++..+.|...|.=..|+++.+.++.++ ..+++
T Consensus 102 l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~l 179 (657)
T KOG2377|consen 102 LEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVL 179 (657)
T ss_pred hHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeecccccccc
Confidence 122333455778888765 3444444333 445544322 22344556777777788888877544333 34444
Q ss_pred EEEeCCC
Q 020798 182 RIWDAST 188 (321)
Q Consensus 182 ~~~d~~~ 188 (321)
.=+-+++
T Consensus 180 npf~~~~ 186 (657)
T KOG2377|consen 180 NPFHFRA 186 (657)
T ss_pred ccEEEee
Confidence 4343333
No 461
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=88.89 E-value=10 Score=33.53 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=19.2
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEE
Q 020798 117 YVFCVNFNPQSNMIVSGAFDETVRIW 142 (321)
Q Consensus 117 ~v~~~~~~~~~~~l~~~~~dg~i~~w 142 (321)
.|..+..++.|..++-++.+|.+.++
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMe 130 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVME 130 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEE
Confidence 35667788888888888888866554
No 462
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=88.45 E-value=4.2 Score=36.97 Aligned_cols=72 Identities=19% Similarity=0.378 Sum_probs=44.2
Q ss_pred CCCCEEEEEeCCCcEEEEecCC----cceee-e----------eec-----------CcccEEEEEECC----CCCEEEE
Q 020798 83 SDSRFLVSASDDKTIRLWDVPT----ATCLK-T----------LIG-----------HTNYVFCVNFNP----QSNMIVS 132 (321)
Q Consensus 83 ~~~~~l~~~~~d~~i~iwd~~~----~~~~~-~----------~~~-----------~~~~v~~~~~~~----~~~~l~~ 132 (321)
++...++.+..||.+....... +.... . +.+ .......+++++ +..++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4666788888999888776653 11111 0 000 123345566666 6678999
Q ss_pred eeCCCcEEEEecCCCEEEEEEe
Q 020798 133 GAFDETVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 133 ~~~dg~i~~wd~~~~~~~~~~~ 154 (321)
.+.|+++|+||+.+++++....
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEec
Confidence 9999999999999999866543
No 463
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.37 E-value=13 Score=36.42 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=26.2
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeecc
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLS 53 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~ 53 (321)
......++|+|...++|.++..|.+++|-..
T Consensus 35 ~~~~~~~afD~~q~llai~t~tg~i~~yg~~ 65 (993)
T KOG1983|consen 35 PSTPSALAFDPTQGLLAIGTRTGAIKIYGQP 65 (993)
T ss_pred CCCCcceeeccccceEEEEEecccEEEeccc
Confidence 3456679999999999999999999998544
No 464
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=88.05 E-value=5.2 Score=29.97 Aligned_cols=30 Identities=10% Similarity=0.341 Sum_probs=23.8
Q ss_pred CCeeEEEEccCC------CEEEEEeCCCeEEEEeCC
Q 020798 158 DPVTAVDFNRDG------TMIVTSSYDGLCRIWDAS 187 (321)
Q Consensus 158 ~~v~~~~~~~~~------~~l~~~~~dg~i~~~d~~ 187 (321)
..+.+++|+|.| -.|++.+.++.+.+|...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 368899999954 267788899999999755
No 465
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=87.96 E-value=7.6 Score=27.50 Aligned_cols=117 Identities=9% Similarity=0.119 Sum_probs=60.0
Q ss_pred EEEccCCCEEEEEeCCCeEEEEeCCCCceee-------eeccCCCCCeEEEEEcc-----CCCEEEEEecCCeEEEEeCC
Q 020798 163 VDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-------TLIDDENPPVSFVKFSP-----NGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 163 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~-------~~~~~~~~~~~~~~~~~-----~g~~l~~~~~d~~i~i~d~~ 230 (321)
-.|......|++++..|.|.+++........ .++ ..+..+++++--+ +...|+.|+ ...|..||+.
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~ 81 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVE 81 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcc
Confidence 3455555578888888889888865322110 111 1233455553322 334555555 5569999987
Q ss_pred CCcEEEEEeccCCceeEEEe-EEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 231 TGKILKTYTGHTNSKYCISS-TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
....+..-..+. ...++.. .+...+..+++ .+.+..|.-||....+.....
T Consensus 82 ~N~d~Fyke~~D-Gvn~i~~g~~~~~~~~l~i-vGGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 82 NNSDLFYKEVPD-GVNAIVIGKLGDIPSPLVI-VGGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred cCchhhhhhCcc-ceeEEEEEecCCCCCcEEE-ECceEEEEEeCCCCcEEEEEe
Confidence 665443222222 2222322 22222334444 445667777887655555443
No 466
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=87.91 E-value=2.8 Score=22.41 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=23.5
Q ss_pred CCCCEEEEe-eCCCcEEEEecCCCEEEEEEeCC
Q 020798 125 PQSNMIVSG-AFDETVRIWDVKTGKCLKVLPAH 156 (321)
Q Consensus 125 ~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~ 156 (321)
|++++|+++ ..++.|.++|..+++.+..+...
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg 33 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG 33 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence 566766554 45789999999888877777653
No 467
>KOG2063 consensus Vacuolar assembly/sorting proteins VPS39/VAM6/VPS3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.55 E-value=28 Score=33.47 Aligned_cols=76 Identities=18% Similarity=0.242 Sum_probs=44.3
Q ss_pred EECCCCCEEEEecCCceEEEeeccccCCCCCCCC----CcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc
Q 020798 30 KFSHDGRLLASSSADKTLLTYSLSSISNSDSTPP----SPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA 105 (321)
Q Consensus 30 ~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~----~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 105 (321)
++..-|+.+..|+.+|.+..|.+........... ..... .-++.+|..+...+.-..++ ...|+.+.++++...
T Consensus 21 ~va~~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~-~~~kk~i~~l~~~~~~~~ll-~l~dsqi~~~~l~~~ 98 (877)
T KOG2063|consen 21 CVAAYGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEK-EFSKKPINKLLVCASLELLL-ILSDSQIAVHKLPEL 98 (877)
T ss_pred HHHHhCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhh-hhccchhHHHhhcchhcchh-eecCCcceeeecCcc
Confidence 3445678899999999999998765432222111 00000 11245666666665544444 345677888887665
Q ss_pred ce
Q 020798 106 TC 107 (321)
Q Consensus 106 ~~ 107 (321)
+.
T Consensus 99 ~~ 100 (877)
T KOG2063|consen 99 EP 100 (877)
T ss_pred cc
Confidence 54
No 468
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=87.52 E-value=2.7 Score=27.44 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=28.8
Q ss_pred EeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 262 ~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
.+..+|.+.-||..+++.---+.+-. .-+.++.+||+..++.+
T Consensus 32 e~~~~GRll~ydp~t~~~~vl~~~L~-fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 32 EGRPTGRLLRYDPSTKETTVLLDGLY-FPNGVALSPDESFVLVA 74 (89)
T ss_dssp HT---EEEEEEETTTTEEEEEEEEES-SEEEEEE-TTSSEEEEE
T ss_pred cCCCCcCEEEEECCCCeEEEehhCCC-ccCeEEEcCCCCEEEEE
Confidence 35667889999998887544444433 45999999999987776
No 469
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=87.01 E-value=12 Score=28.83 Aligned_cols=152 Identities=15% Similarity=0.102 Sum_probs=80.2
Q ss_pred CCCEEEEEeCCC--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEEEEeCCCCCe
Q 020798 84 DSRFLVSASDDK--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLKVLPAHSDPV 160 (321)
Q Consensus 84 ~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v 160 (321)
+|.++.+.+.-| .|++||+.+++.+.+..-....++.--...-++.+ .-.-.+|.-..+|.++-+++..+. .++.-
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCcc
Confidence 445565555443 59999999888765433221222211111113332 233567777788877766554443 22233
Q ss_pred eEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec-cCCCCCeE---EEEEccCCCEEEEEecCCeEEEEeCCCCcEEE
Q 020798 161 TAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI-DDENPPVS---FVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236 (321)
Q Consensus 161 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~---~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~ 236 (321)
+.++ .++..++.+....++++-|..+.....++. .....+|. .+.|- +|...+-.-.+..|...|..+|+.+.
T Consensus 134 WgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~ 210 (262)
T COG3823 134 WGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVA 210 (262)
T ss_pred eeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEE
Confidence 3443 456667777777788877766543322221 11122222 22222 56555555555667777777887766
Q ss_pred EEe
Q 020798 237 TYT 239 (321)
Q Consensus 237 ~~~ 239 (321)
.+.
T Consensus 211 wid 213 (262)
T COG3823 211 WID 213 (262)
T ss_pred EEE
Confidence 553
No 470
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=87.01 E-value=21 Score=31.51 Aligned_cols=113 Identities=13% Similarity=0.107 Sum_probs=60.1
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC------CEEEEEe--
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS------RFLVSAS-- 92 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~------~~l~~~~-- 92 (321)
.....-..|+|.|||++|++--..|.|++++........... .+......-.++...|+++|+- ++|+..-
T Consensus 27 ~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~-l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~ 105 (454)
T TIGR03606 27 SGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFT-LPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTY 105 (454)
T ss_pred CCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeec-CCceeccCCCCceeeEEECCCccccCCCcEEEEEEec
Confidence 345677789999999888776546888887643321100000 0000001125788999999873 2444331
Q ss_pred --------CCCcEEEEecCCc-------ceee-ee---ecCcccEEEEEECCCCCEEEEeeCC
Q 020798 93 --------DDKTIRLWDVPTA-------TCLK-TL---IGHTNYVFCVNFNPQSNMIVSGAFD 136 (321)
Q Consensus 93 --------~d~~i~iwd~~~~-------~~~~-~~---~~~~~~v~~~~~~~~~~~l~~~~~d 136 (321)
....|.-|.+... +.+. .+ ..|. -..+.|.|||.++++.+..
T Consensus 106 ~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 106 KNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred cCCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence 1233544554321 1111 11 1233 2467899999876655543
No 471
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=86.98 E-value=17 Score=30.51 Aligned_cols=103 Identities=13% Similarity=0.209 Sum_probs=60.8
Q ss_pred ccEEEEEECCCCCEEEEeeCCCc------EEEEecCC--C--EEE---E--EEeCCC--------CCeeEEEEccCCCEE
Q 020798 116 NYVFCVNFNPQSNMIVSGAFDET------VRIWDVKT--G--KCL---K--VLPAHS--------DPVTAVDFNRDGTMI 172 (321)
Q Consensus 116 ~~v~~~~~~~~~~~l~~~~~dg~------i~~wd~~~--~--~~~---~--~~~~~~--------~~v~~~~~~~~~~~l 172 (321)
+.++.+.+.+++..+++.+.+|. ++.+++.. + ..+ . .+.... ....++++.+++.++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 34667788766666666676676 55555432 1 001 0 111111 134578887788888
Q ss_pred EEEeCC------CeEEEEeCCCCceeeeec--------------cCCCCCeEEEEEccCCCEEEEEe
Q 020798 173 VTSSYD------GLCRIWDASTGHCMKTLI--------------DDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 173 ~~~~~d------g~i~~~d~~~~~~~~~~~--------------~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
++.-.+ ..|.-++.. +.....+. ...+.....++++|+|+.|+++.
T Consensus 100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~ 165 (326)
T PF13449_consen 100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM 165 (326)
T ss_pred EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence 777777 788888866 44332220 11234578899999999666654
No 472
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=86.68 E-value=3.2 Score=21.86 Aligned_cols=32 Identities=19% Similarity=0.074 Sum_probs=21.3
Q ss_pred CCCCCeEEEEecCCCceEEEEeecC-CccEEEc
Q 020798 285 GHTDPVISVASHPTENIIASGALDN-DRTVKIW 316 (321)
Q Consensus 285 ~h~~~v~~~~~~p~~~~l~s~~~d~-~~~i~iw 316 (321)
.....-...+|+|||+.|+-.+..+ .|.-.||
T Consensus 6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3445667889999999999887532 1556665
No 473
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.32 E-value=24 Score=31.44 Aligned_cols=27 Identities=7% Similarity=-0.015 Sum_probs=22.5
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
.|..+..++.|..++-.+.+|.+.++=
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeL 131 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMEL 131 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEc
Confidence 578888999999999999999776653
No 474
>PRK13684 Ycf48-like protein; Provisional
Probab=86.17 E-value=19 Score=30.33 Aligned_cols=152 Identities=13% Similarity=0.121 Sum_probs=74.9
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEE-EecCCCEEEEEEe-CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q 020798 115 TNYVFCVNFNPQSNMIVSGAFDETVRI-WDVKTGKCLKVLP-AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192 (321)
Q Consensus 115 ~~~v~~~~~~~~~~~l~~~~~dg~i~~-wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 192 (321)
...+..+.+.|++.+++++ ..|.+.. +| ..++.-.... .....++++.+.++++.+++ +..|.+++=....+..-
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~v-g~~G~~~~~s~d~G~sW 248 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWML-ARGGQIRFNDPDDLESW 248 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEE-ecCCEEEEccCCCCCcc
Confidence 4567888999987666554 4565542 22 1122222222 23456788999998876655 45676653223333321
Q ss_pred eeeccC---CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec-cCCceeEEEeEEEecCCeEEEEeCCCCe
Q 020798 193 KTLIDD---ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG-HTNSKYCISSTFSVTNGKYIVSGSEDSC 268 (321)
Q Consensus 193 ~~~~~~---~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 268 (321)
...... ....+..+.+.+++..++ ++.+|.+.. ....++.-..... ...+.......+. .++..++ .+..|.
T Consensus 249 ~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~-~~~~~~~-~G~~G~ 324 (334)
T PRK13684 249 SKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFL-DPEKGFV-LGQRGV 324 (334)
T ss_pred ccccCCccccccceeeEEEcCCCCEEE-EcCCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEe-CCCceEE-ECCCce
Confidence 211111 123456778888877555 455665443 3333333222211 0111111222222 3444444 556787
Q ss_pred EEEEE
Q 020798 269 VYLWE 273 (321)
Q Consensus 269 i~vwd 273 (321)
|--|+
T Consensus 325 il~~~ 329 (334)
T PRK13684 325 LLRYV 329 (334)
T ss_pred EEEec
Confidence 76665
No 475
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=85.57 E-value=0.12 Score=44.27 Aligned_cols=145 Identities=12% Similarity=0.209 Sum_probs=89.8
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEEEEe
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~ 154 (321)
.....|-+++.-++.++.+..+..||-....... . ..+.....++|.-++..+ +.+-..+.+.+||+.+....+.-.
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~agq~~le-~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~ 114 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKAGQVILE-L-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES 114 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhhcceecc-c-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhc
Confidence 3445677877778889999999999865443222 1 234445567787777764 445677899999987543221111
Q ss_pred CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeE
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTL 224 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i 224 (321)
.....-.-+.|++....++.+...|.+.++.-.+.+.... ...+...+.++++.+.+.. +.++.|..+
T Consensus 115 gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv-~Gkh~RRgtq~av~lEd~v-il~dcd~~L 182 (615)
T KOG2247|consen 115 GGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIV-MGKHQRRGTQIAVTLEDYV-ILCDCDNTL 182 (615)
T ss_pred cCcchHHHHhhccCCccccccccccceEEEeccchhhhhh-hcccccceeEEEeccccee-eecCcHHHH
Confidence 1111112267888888888888899999998765432222 2235556778888877643 344444433
No 476
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=85.26 E-value=21 Score=29.87 Aligned_cols=105 Identities=8% Similarity=0.082 Sum_probs=49.5
Q ss_pred CCCEEEEEeCCC-----cEEEEecCCccee---eeeecCccc--EEEEEECCCCCEEEEeeC-----CCcEEEEecCCCE
Q 020798 84 DSRFLVSASDDK-----TIRLWDVPTATCL---KTLIGHTNY--VFCVNFNPQSNMIVSGAF-----DETVRIWDVKTGK 148 (321)
Q Consensus 84 ~~~~l~~~~~d~-----~i~iwd~~~~~~~---~~~~~~~~~--v~~~~~~~~~~~l~~~~~-----dg~i~~wd~~~~~ 148 (321)
++++++.|+.++ .+..||+.+.+.. ..+..-... -.+++. -++..++.|+. ...+..||+.+.+
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 456666776543 4666777665421 111110100 011222 23455566653 2357788887654
Q ss_pred EEE--EEeCCCCCeeEEEEccCCCEEEEEeCCC----eEEEEeCCCCc
Q 020798 149 CLK--VLPAHSDPVTAVDFNRDGTMIVTSSYDG----LCRIWDASTGH 190 (321)
Q Consensus 149 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~d~~~~~ 190 (321)
=.. .++. .......+...++.+++.|+.++ .+..||+.+.+
T Consensus 151 W~~~~~~p~-~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 151 WFELPDFPG-EPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred eeECCCCCC-CCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence 221 1211 11112222234566777777654 24578877654
No 477
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=84.64 E-value=34 Score=31.86 Aligned_cols=162 Identities=13% Similarity=0.184 Sum_probs=76.6
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceee-ee--ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK-TL--IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL 150 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 150 (321)
..+-.+.|+.+.. |++-..+|++.+|++....... .+ ......|.-+.+..+|-.+++ .+|.+.+-.-......
T Consensus 84 ~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVavlt--~~g~v~~i~~~~~~~~ 160 (829)
T KOG2280|consen 84 GELIGMGWSDDEE-LICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVAVLT--VSGQVILINGVEEPKL 160 (829)
T ss_pred CCeeeecccCCce-EEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceEEEe--cCCcEEEEcCCCcchh
Confidence 4778899998765 5567899999999975432211 01 112223444444444533333 3344443321111111
Q ss_pred EEEeC---CCCCeeEEEEccCCC---EEEEEe-CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCe
Q 020798 151 KVLPA---HSDPVTAVDFNRDGT---MIVTSS-YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNT 223 (321)
Q Consensus 151 ~~~~~---~~~~v~~~~~~~~~~---~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~ 223 (321)
..++. ..-+-.+-...+++. .++-.. ..+ ..++-.................+..+..+|++++|+.-...|.
T Consensus 161 ~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~ 239 (829)
T KOG2280|consen 161 RKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGK 239 (829)
T ss_pred hhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCCCceEEEEEEcCCcceEEEEecCCc
Confidence 22211 111111222222211 111111 000 0111111111111111112245677899999999999999999
Q ss_pred EEEEeCCCCcEEEEEe
Q 020798 224 LRLWNYSTGKILKTYT 239 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~ 239 (321)
|.+.+....+.+-.+.
T Consensus 240 i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 240 IWVVSIDLSQILCEFN 255 (829)
T ss_pred EEEEecchhhhhhccC
Confidence 9998877665555443
No 478
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=84.50 E-value=17 Score=28.20 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=58.3
Q ss_pred CEEEEEeCCCcEEEEecCCc--ceeeeeecCcccEEEEEECCCCCEEEEeeCC---C---cEEEE---ecC--CCEEE--
Q 020798 86 RFLVSASDDKTIRLWDVPTA--TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD---E---TVRIW---DVK--TGKCL-- 150 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g---~i~~w---d~~--~~~~~-- 150 (321)
+.|+.+.....|.+|++... +...++. .-+.|..+.++..|+++++--.+ . .+|+| +.. ...++
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 45555566778999998833 2333333 44778899999999999985322 2 55664 221 01111
Q ss_pred ---------------------EEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC
Q 020798 151 ---------------------KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188 (321)
Q Consensus 151 ---------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 188 (321)
-.++. ..++.+++..|-..-|+.|+. +.+.+|.+..
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl-~~~p~ciaCC~~tG~LlVg~~-~~l~lf~l~~ 164 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPL-SEPPLCIACCPVTGNLLVGCG-NKLVLFTLKY 164 (215)
T ss_pred EEcccccccCCCCccccceEEEEecC-CCCCCEEEecCCCCCEEEEcC-CEEEEEEEEE
Confidence 11222 335677887775444444444 5677887653
No 479
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=84.33 E-value=3 Score=20.86 Aligned_cols=25 Identities=16% Similarity=0.363 Sum_probs=20.1
Q ss_pred EEEEeCCCCeEEEEEcccceEEEEe
Q 020798 259 YIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
.+++++.+|.+..+|..+++.+.+.
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 4667888999999999888876543
No 480
>PLN02153 epithiospecifier protein
Probab=84.04 E-value=25 Score=29.72 Aligned_cols=24 Identities=8% Similarity=0.207 Sum_probs=15.2
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCcce
Q 020798 84 DSRFLVSASDD-----KTIRLWDVPTATC 107 (321)
Q Consensus 84 ~~~~l~~~~~d-----~~i~iwd~~~~~~ 107 (321)
++++++.|+.+ ..+.+||+.+.+.
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W 113 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEW 113 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEE
Confidence 45666677643 3577888876543
No 481
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=83.35 E-value=39 Score=31.51 Aligned_cols=50 Identities=14% Similarity=0.323 Sum_probs=34.8
Q ss_pred CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC
Q 020798 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188 (321)
Q Consensus 137 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 188 (321)
-.|++|++. |+.+..+.-....+-.+.|+.+. .|++...+|++++|++..
T Consensus 64 ~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 64 PYIRIFNIS-GQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG 113 (829)
T ss_pred eeEEEEecc-ccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch
Confidence 457788754 55544433333367789998765 577888999999999754
No 482
>PLN02193 nitrile-specifier protein
Probab=82.96 E-value=34 Score=30.51 Aligned_cols=138 Identities=16% Similarity=0.105 Sum_probs=62.6
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCceeeeeccC--CCCCeEEEEEccCCCEEEEEecC-----CeEEEEeCCCCcEE
Q 020798 168 DGTMIVTSSYD-----GLCRIWDASTGHCMKTLIDD--ENPPVSFVKFSPNGKFILVGTLD-----NTLRLWNYSTGKIL 235 (321)
Q Consensus 168 ~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~d-----~~i~i~d~~~~~~~ 235 (321)
++.+++.|+.+ ..+..||+.+.+-....... ..+.....+..-++++++.|+.+ ..+..||+.+.+..
T Consensus 228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~ 307 (470)
T PLN02193 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWF 307 (470)
T ss_pred CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEE
Confidence 45566677654 35778888765432211100 01111111222355666666644 34678887765533
Q ss_pred EEEec--cCCceeEEEeEEEecCCeEEEEeCCC----CeEEEEEcccceEE--EEec-CCCC-CeEEEEecCCCceEEEE
Q 020798 236 KTYTG--HTNSKYCISSTFSVTNGKYIVSGSED----SCVYLWELQSRKVV--QKLE-GHTD-PVISVASHPTENIIASG 305 (321)
Q Consensus 236 ~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~--~~~~-~h~~-~v~~~~~~p~~~~l~s~ 305 (321)
..... ........... ..+++.++.|+.+ ..+.+||+.+.+-. ..+. .... ...+++ .-++++++.|
T Consensus 308 ~~~~~~~~~~~R~~~~~~--~~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~-~~~~~iyv~G 384 (470)
T PLN02193 308 HCSTPGDSFSIRGGAGLE--VVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASA-AVGKHIVIFG 384 (470)
T ss_pred eCCCCCCCCCCCCCcEEE--EECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEE-EECCEEEEEC
Confidence 21110 00001111111 1246666666655 45888998775432 1110 0111 112222 2356788888
Q ss_pred eec
Q 020798 306 ALD 308 (321)
Q Consensus 306 ~~d 308 (321)
+..
T Consensus 385 G~~ 387 (470)
T PLN02193 385 GEI 387 (470)
T ss_pred Ccc
Confidence 753
No 483
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=82.77 E-value=48 Score=33.09 Aligned_cols=150 Identities=15% Similarity=0.304 Sum_probs=83.7
Q ss_pred EEEEECCC-CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEE-CCC-------CCEEEEeeCCCcEEEEecC--
Q 020798 77 SDLVFSSD-SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF-NPQ-------SNMIVSGAFDETVRIWDVK-- 145 (321)
Q Consensus 77 ~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~-------~~~l~~~~~dg~i~~wd~~-- 145 (321)
..+-+-|. ++.-+ +.|+.+.+|+.+++.....+.+....|..+.+ -|. =++++.-..--.|.++-+.
T Consensus 82 ~~mGiFpeI~RaWi--TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~ 159 (1311)
T KOG1900|consen 82 TDMGIFPEIGRAWI--TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFD 159 (1311)
T ss_pred eeeccchhhcceEE--EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEec
Confidence 34444443 33333 46889999999886655555555555544443 222 1233332333445554332
Q ss_pred --CCEE-----EEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeC----CCC---c-eee----------------e
Q 020798 146 --TGKC-----LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA----STG---H-CMK----------------T 194 (321)
Q Consensus 146 --~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~----~~~---~-~~~----------------~ 194 (321)
++.. ...+......|.++....+|+.|++|-.+ . +|.+ ..+ + +.+ .
T Consensus 160 ~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg-~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~ 236 (1311)
T KOG1900|consen 160 EFTGELSIFNTSFKISVDGVSVNCITYTENGRIFFAGRDG-N--LYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLS 236 (1311)
T ss_pred cccCcccccccceeeecCCceEEEEEeccCCcEEEeecCC-C--EEEEEEeccCchhhcccccccCchhHHHHhhhhhhc
Confidence 1111 12233345567888878888877666554 3 3332 111 0 110 1
Q ss_pred eccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 020798 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 195 ~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~ 231 (321)
+...+..+|..+.++...+.+.+-+..+.|.+||+..
T Consensus 237 ~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 237 VPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 1113345788899988888888888999999999865
No 484
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=82.65 E-value=5.5 Score=21.18 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=21.5
Q ss_pred CCeE-EEEeCCCCeEEEEEcccceEEEEecC
Q 020798 256 NGKY-IVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 256 ~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
++++ +++.-.++.|.++|..+++.+..+..
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 3444 44455688999999988888777665
No 485
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=82.58 E-value=25 Score=28.76 Aligned_cols=94 Identities=20% Similarity=0.289 Sum_probs=56.2
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEee------CCCcEEEEecCCCEEEEEEeC-----CCCCeeE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA------FDETVRIWDVKTGKCLKVLPA-----HSDPVTA 162 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~~wd~~~~~~~~~~~~-----~~~~v~~ 162 (321)
...|++||..+.+...--.+-.+.|..+.|..+.+.++.|. ....+..||..+..- ..+.. -.+++..
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgpv~a 93 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGPVTA 93 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCcEEE
Confidence 44699999887765444445567899999986655666553 345678898876542 22222 2367777
Q ss_pred EEEcc-CCC-EEEEEe-C--CCeEEEEeCCC
Q 020798 163 VDFNR-DGT-MIVTSS-Y--DGLCRIWDAST 188 (321)
Q Consensus 163 ~~~~~-~~~-~l~~~~-~--dg~i~~~d~~~ 188 (321)
+.+.. ++. ..+.|. . +..+..||-.+
T Consensus 94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~ 124 (281)
T PF12768_consen 94 LTFISNDGSNFWVAGRSANGSTFLMKYDGSS 124 (281)
T ss_pred EEeeccCCceEEEeceecCCCceEEEEcCCc
Confidence 77643 333 343433 2 23466676543
No 486
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=82.25 E-value=33 Score=29.92 Aligned_cols=143 Identities=19% Similarity=0.276 Sum_probs=74.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCcee--ee-eccCCCCCeEEEEEc---c--CCCEEEEEecCCeEEEEeCCC--Cc-----
Q 020798 169 GTMIVTSSYDGLCRIWDASTGHCM--KT-LIDDENPPVSFVKFS---P--NGKFILVGTLDNTLRLWNYST--GK----- 233 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~~~--~~-~~~~~~~~~~~~~~~---~--~g~~l~~~~~d~~i~i~d~~~--~~----- 233 (321)
...+++|+..|.+++|+....... .. +...-..+|-.+..- + ....|++ -.-..+.||.+.. +.
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccCc
Confidence 458999999999999998543211 11 111223455555432 2 2223333 4456777887621 11
Q ss_pred --EEEEEeccCCceeEEEeE---EEecC-CeEEEEeCCCCeEEEEEcccceEEEEecC--CCCCeEEEEecCCCceEEEE
Q 020798 234 --ILKTYTGHTNSKYCISST---FSVTN-GKYIVSGSEDSCVYLWELQSRKVVQKLEG--HTDPVISVASHPTENIIASG 305 (321)
Q Consensus 234 --~~~~~~~~~~~~~~~~~~---~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s~ 305 (321)
.+...-.|.-.......+ |-... ..+++.-+-||.+.+|+-+.-.....+.+ +.+| +.+.|.-+.|+++
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgP---l~Y~~~tDsfvt~ 192 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGP---LCYCPRTDSFVTA 192 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcC---eEEeecCCEEEEe
Confidence 122222222221112222 21122 46788889999999999765443344443 2333 5566666677776
Q ss_pred eecCCccEEEcc
Q 020798 306 ALDNDRTVKIWT 317 (321)
Q Consensus 306 ~~d~~~~i~iw~ 317 (321)
+. +..+..|.
T Consensus 193 ss--s~~l~~Yk 202 (418)
T PF14727_consen 193 SS--SWTLECYK 202 (418)
T ss_pred cC--ceeEEEec
Confidence 53 24555554
No 487
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=81.97 E-value=32 Score=29.51 Aligned_cols=187 Identities=17% Similarity=0.332 Sum_probs=98.6
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEc----cCCCE--EEEEe-CC---CeEEEEeCC--CCcee
Q 020798 125 PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN----RDGTM--IVTSS-YD---GLCRIWDAS--TGHCM 192 (321)
Q Consensus 125 ~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~----~~~~~--l~~~~-~d---g~i~~~d~~--~~~~~ 192 (321)
|...+++....++-+.+||+. |+.++.+.. +....+... -.++. |+.++ .+ .+|++|.+. ++. +
T Consensus 66 p~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~-L 141 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLD-GKELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGE-L 141 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETT-S-EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTE-E
T ss_pred cccceEEEEeCCCCEEEEcCC-CcEEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCc-c
Confidence 345677778888899999987 455555542 334433332 13332 44444 32 478998664 332 2
Q ss_pred eeeccC------CCCCeEEEEE--cc-CCC-EEEEEecCCeEEEEeCC---CC----cEEEEEeccCCceeEEEeEEEec
Q 020798 193 KTLIDD------ENPPVSFVKF--SP-NGK-FILVGTLDNTLRLWNYS---TG----KILKTYTGHTNSKYCISSTFSVT 255 (321)
Q Consensus 193 ~~~~~~------~~~~~~~~~~--~~-~g~-~l~~~~~d~~i~i~d~~---~~----~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
..+... ....+..+++ ++ +|. +.++...+|.+..|-+. ++ ++++.+..... +..|....
T Consensus 142 ~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ----~EGCVVDD 217 (381)
T PF02333_consen 142 TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQ----PEGCVVDD 217 (381)
T ss_dssp EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-----EEEEEEET
T ss_pred eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCc----ceEEEEec
Confidence 222111 1112344443 33 455 45567788988777653 33 45677765433 33344445
Q ss_pred CCeEEEEeCCCCeEEEEEccc-----ceEEEEecC--CCCCeEEEEec--CCC-ceEEEEeecCCccEEEccccc
Q 020798 256 NGKYIVSGSEDSCVYLWELQS-----RKVVQKLEG--HTDPVISVASH--PTE-NIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 256 ~~~~l~~~~~dg~i~vwd~~~-----~~~~~~~~~--h~~~v~~~~~~--p~~-~~l~s~~~d~~~~i~iw~~~~ 320 (321)
....|..|-++.-|.-|+.+. ++.+....+ ....|-.++.- +++ .||+..+. ++++..+|+.+.
T Consensus 218 e~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQ-G~~sf~Vy~r~~ 291 (381)
T PF02333_consen 218 ETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQ-GDNSFAVYDREG 291 (381)
T ss_dssp TTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEG-GGTEEEEEESST
T ss_pred ccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcC-CCCeEEEEecCC
Confidence 566788888887777777642 233433333 34677777763 343 46776665 467888998753
No 488
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=80.49 E-value=31 Score=28.33 Aligned_cols=190 Identities=14% Similarity=0.114 Sum_probs=98.3
Q ss_pred EEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcce
Q 020798 28 SVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC 107 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 107 (321)
.++++ +++...+..+..+++.|+...... ..+-.+. -.+.-+++.. .|++...+..|.-+-+.|+.+.+.
T Consensus 91 Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP-----~~~~~ln-t~gyaygv~v--sGn~aYVadlddgfLivdvsdpss 160 (370)
T COG5276 91 DVRVS--EEYVYVADWSSGLRIVDISTPDSP-----TLIGFLN-TDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSS 160 (370)
T ss_pred eeEec--ccEEEEEcCCCceEEEeccCCCCc-----ceecccc-CCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCC
Confidence 34444 466777777888999988653221 1111111 1123334444 577888777666678888866532
Q ss_pred ---eeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC--CCCCeeEEEEccCCCEEEEEeCCCeEE
Q 020798 108 ---LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA--HSDPVTAVDFNRDGTMIVTSSYDGLCR 182 (321)
Q Consensus 108 ---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~ 182 (321)
.............++.+ |++-..+..|+-+.+.|+........+.. ....+.++..+++..++ +....| +.
T Consensus 161 P~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~-vvy~eg-vl 236 (370)
T COG5276 161 PQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYL-VVYDEG-VL 236 (370)
T ss_pred ceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEE-EEcccc-eE
Confidence 22222223333455555 67777778899999999876543222211 12245666666544333 333333 45
Q ss_pred EEeCCCCceeeeeccCCCC-CeEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 020798 183 IWDASTGHCMKTLIDDENP-PVSFVKFSPNGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 183 ~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~ 231 (321)
+-|..+......+-.-... ++..-.+.-.|++......+.-+.+.|+.+
T Consensus 237 ivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisn 286 (370)
T COG5276 237 IVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISN 286 (370)
T ss_pred EEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccC
Confidence 5666554422222111111 111112333455666666666666666654
No 489
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=80.27 E-value=50 Score=30.66 Aligned_cols=243 Identities=15% Similarity=0.170 Sum_probs=117.5
Q ss_pred EEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccc-cccccEEEEEECCC---CCEEEEEeCCCc-EEEEec
Q 020798 28 SVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT-GHEQGVSDLVFSSD---SRFLVSASDDKT-IRLWDV 102 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~~~---~~~l~~~~~d~~-i~iwd~ 102 (321)
+..++|+.+.+-.|=....|.-|-+. +.+..+..+. .....|.||..... .+..++|-.++. -++-.+
T Consensus 32 s~~~s~~sn~IdiGIS~S~ISsYIi~-------PTPKLiwsypi~pt~iV~~~dV~~~~~~~~~~~~glt~rKk~~ll~i 104 (670)
T PF10395_consen 32 SDDFSPDSNQIDIGISGSAISSYIIK-------PTPKLIWSYPISPTTIVECCDVLEKSDGKKLYCVGLTERKKFKLLLI 104 (670)
T ss_pred ecccCCCCceEEEEeccchhhheecC-------CCcceeEeeccCcCceEEEEEeEecCCCcEEEEEEEeeCCeeEEEEE
Confidence 33678888877666545555545321 2222222222 23455677765432 234555544443 343333
Q ss_pred CCc-----------c--eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE--EEe-CCCCCeeEEEEc
Q 020798 103 PTA-----------T--CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK--VLP-AHSDPVTAVDFN 166 (321)
Q Consensus 103 ~~~-----------~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~-~~~~~v~~~~~~ 166 (321)
... + ....+. -.+.+..+.+.++++.+++....|.|.+||...+.... ... .+...+.--.|-
T Consensus 105 ~~~~~~~~~~~~~~e~~~~~~~k-l~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv 183 (670)
T PF10395_consen 105 ERKVGSTEDGTVNSETTNEFELK-LDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFV 183 (670)
T ss_pred EccCccccccccCccccceEEEE-cccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhh
Confidence 222 0 011122 35668889999999999999999999999983322111 111 111111100222
Q ss_pred c------CCCEEEEEeC-C---CeEEEEeC--CCCceeeeec--cCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCC
Q 020798 167 R------DGTMIVTSSY-D---GLCRIWDA--STGHCMKTLI--DDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 167 ~------~~~~l~~~~~-d---g~i~~~d~--~~~~~~~~~~--~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~ 231 (321)
+ ...++++.+. . -.++++.+ ...... .+. ...........|+. +|...-. .++.|.+|++..
T Consensus 184 ~~~~~~~~~~~ll~v~~~~~~k~~ykL~~l~~~~~~~~-El~s~~~e~~~~~~s~f~Y~~G~LY~l--~~~~i~~ysip~ 260 (670)
T PF10395_consen 184 NDFELENGKDLLLTVSQLSNSKLSYKLISLSNESSSIF-ELSSTILENFGLEDSKFCYQFGKLYQL--SKKTISSYSIPN 260 (670)
T ss_pred cccccccCCceEEEEEEcCCCcEEEEEEEeccCCcceE-EeehheeccCCcccceEEEeCCEEEEE--eCCEEEEEEcCC
Confidence 2 1234443333 2 24677777 222211 111 01111122223332 4543332 678999999988
Q ss_pred CcEEEEEeccC--Cce-eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 232 GKILKTYTGHT--NSK-YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 232 ~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
-+...++.-.. ... ..+.....+...+.|++ .+..|++.|+.-...+..+
T Consensus 261 f~~~~tI~l~~ii~~~~~~~vSl~~~s~nRvLLs--~~nkIyLld~~~~siLse~ 313 (670)
T PF10395_consen 261 FQIQKTISLPSIIDKESDDLVSLKPPSPNRVLLS--VNNKIYLLDLKFESILSEF 313 (670)
T ss_pred ceEEEEEEechhhccccccceEeecCCCCeEEEE--cCCEEEEEeehhhhhhhhh
Confidence 77666654321 010 11222222233455553 3568999998655544443
No 490
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=80.12 E-value=14 Score=24.16 Aligned_cols=41 Identities=15% Similarity=0.203 Sum_probs=25.3
Q ss_pred eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEe
Q 020798 92 SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG 133 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 133 (321)
..+|.+..||..+++...-+.+ -...+.+++++|+.+++.+
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~~-L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLDG-LYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEEE-ESSEEEEEE-TTSSEEEEE
T ss_pred CCCcCEEEEECCCCeEEEehhC-CCccCeEEEcCCCCEEEEE
Confidence 3457788899888864322222 2346789999999977665
No 491
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=79.30 E-value=7.2 Score=20.51 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=21.5
Q ss_pred EEEeCCCCeEEEEEcccceEEEEecC
Q 020798 260 IVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
+..++.+|.|+-.|.++++.+.+++.
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 44569999999999999999887654
No 492
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=79.01 E-value=17 Score=28.19 Aligned_cols=48 Identities=6% Similarity=0.130 Sum_probs=35.2
Q ss_pred eEEEEeCCCCeEEEEEccc--ceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 258 KYIVSGSEDSCVYLWELQS--RKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 258 ~~l~~~~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
+.|..+...+.|.+|++.. .+++..+..- +.|..++++..|++|+|-=
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEE
Confidence 3444446667899999983 3455566543 7899999999999999963
No 493
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=78.69 E-value=6.6 Score=36.27 Aligned_cols=67 Identities=19% Similarity=0.338 Sum_probs=42.6
Q ss_pred CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
..++++.-+|.+..++.+..||.+.+|+.......+ +... ..+-..+.|...| +++.++|..+.-|.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qsk-i~~~-~~p~~nlv~tnhg--l~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSK-ICEE-AKPKENLVFTNHG--LVTATSDRRALAWK 81 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccchhh-hhhh-cCCccceeeeccc--eEEEeccchhheee
Confidence 346677888999999999999999999875332111 1111 1222344555444 56667777777775
No 494
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=78.20 E-value=51 Score=29.52 Aligned_cols=186 Identities=14% Similarity=0.134 Sum_probs=0.0
Q ss_pred CCCCEEEEE---eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCC
Q 020798 83 SDSRFLVSA---SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159 (321)
Q Consensus 83 ~~~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 159 (321)
.++=+++.. .......++| ..+.....+.........+...++|.+++... ..++.+|+. |+.+.........
T Consensus 113 ~~gl~~~~~~~~~~~~~~~~iD-~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~ 188 (477)
T PF05935_consen 113 EDGLYFVNGNDWDSSSYTYLID-NNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGY 188 (477)
T ss_dssp TT-EEEEEETT--BEEEEEEEE-TTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTE
T ss_pred CCcEEEEeCCCCCCCceEEEEC-CCccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcc
Q ss_pred ---eeEEEEccCCCEEEEEeC-------------CCeEEEEeCCCCceeeeeccCCC-----------------------
Q 020798 160 ---VTAVDFNRDGTMIVTSSY-------------DGLCRIWDASTGHCMKTLIDDEN----------------------- 200 (321)
Q Consensus 160 ---v~~~~~~~~~~~l~~~~~-------------dg~i~~~d~~~~~~~~~~~~~~~----------------------- 200 (321)
-..+...|+|++|+.+.. ...|...| .+|+.+..+.....
T Consensus 189 ~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~ 267 (477)
T PF05935_consen 189 YDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGG 267 (477)
T ss_dssp E-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTT
T ss_pred cccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCC
Q ss_pred ---CCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeE-------E-----------EeEEEecCCe
Q 020798 201 ---PPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC-------I-----------SSTFSVTNGK 258 (321)
Q Consensus 201 ---~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-------~-----------~~~~~~~~~~ 258 (321)
..++++.+.+ ++.+++++-.-..|...|.++++..-.+..+..-... . ...+...-|+
T Consensus 268 ~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~w~~~~~~~ll~~vd~~G~~~~~~~~~~~~~~gQ 347 (477)
T PF05935_consen 268 RDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGGWNGTYQDYLLTPVDSNGNPIDCGDGDFDWFWGQ 347 (477)
T ss_dssp SBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-STT--TTTGGGB-EEB-TTS-B-EBSSSS----SS-
T ss_pred CCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCCCCCcccchheeeeeccCCceeeccCCCCcccccc
Q ss_pred EEEEeCCCC---eEEEEE
Q 020798 259 YIVSGSEDS---CVYLWE 273 (321)
Q Consensus 259 ~l~~~~~dg---~i~vwd 273 (321)
+-+.--.+| .|.+||
T Consensus 348 H~~~~~~~g~~~~l~vFD 365 (477)
T PF05935_consen 348 HTAHLIPDGPQGNLLVFD 365 (477)
T ss_dssp EEEEE-TTS---SEEEEE
T ss_pred cceEEcCCCCeEEEEEEE
No 495
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=77.96 E-value=76 Score=31.45 Aligned_cols=30 Identities=20% Similarity=0.383 Sum_probs=25.3
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
....++|+|...+++.++.+|.|++|-...
T Consensus 37 ~~~~~afD~~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 37 TPSALAFDPTQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred CCcceeeccccceEEEEEecccEEEecccc
Confidence 345688999999999999999999997543
No 496
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=76.83 E-value=32 Score=32.96 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=48.3
Q ss_pred CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE-EeCCC-----eEEEEeCCCCceeeeeccCCCCCeEEEEEcc
Q 020798 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT-SSYDG-----LCRIWDASTGHCMKTLIDDENPPVSFVKFSP 210 (321)
Q Consensus 137 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (321)
+.|.+-|............+..++.+-+|+|||+.++- .+.++ .|++-|+++...-...+.-....|......+
T Consensus 329 ~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e 408 (912)
T TIGR02171 329 GNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLE 408 (912)
T ss_pred CeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecC
Confidence 46777776554444331456788899999999999887 44443 4788888653221111122234455566666
Q ss_pred CCCEEEE
Q 020798 211 NGKFILV 217 (321)
Q Consensus 211 ~g~~l~~ 217 (321)
+|..+++
T Consensus 409 ~gdt~iv 415 (912)
T TIGR02171 409 NGDTVIV 415 (912)
T ss_pred CCCeEEE
Confidence 6665443
No 497
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=74.45 E-value=34 Score=27.48 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=38.9
Q ss_pred CEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe-cCCeEEEEeCCCCeEEEE
Q 020798 213 KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV-TNGKYIVSGSEDSCVYLW 272 (321)
Q Consensus 213 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~dg~i~vw 272 (321)
..++.|++++.|.|.|...-..+..+.-..-+......-... .|. .++.++.||.|++.
T Consensus 196 scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdy-RI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 196 SCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDY-RIVVACRDGKIYTI 255 (257)
T ss_pred ceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccce-EEEEEeCCCEEEEE
Confidence 458899999999999988777777766554443322222222 333 46667889988753
No 498
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=74.18 E-value=48 Score=27.27 Aligned_cols=147 Identities=19% Similarity=0.172 Sum_probs=75.5
Q ss_pred CCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceee--e
Q 020798 33 HDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK--T 110 (321)
Q Consensus 33 ~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~ 110 (321)
-.|+++.++..|..+.++|+.+.. .+....++......-..++.| |++-..+..|+-+.+-|+....... .
T Consensus 136 vsGn~aYVadlddgfLivdvsdps-----sP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~ 208 (370)
T COG5276 136 VSGNYAYVADLDDGFLIVDVSDPS-----SPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIG 208 (370)
T ss_pred ecCCEEEEeeccCcEEEEECCCCC-----CceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEE
Confidence 357888777766677777776421 112222232233333455554 5677777888999999987654322 1
Q ss_pred eecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC--CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC
Q 020798 111 LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA--HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST 188 (321)
Q Consensus 111 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 188 (321)
-......+.++..+++-.+++.. +--+.+-|..+......+.. ...++..-.+.-.+++......+.-+.+-|+.+
T Consensus 209 ~~n~g~g~~sv~vsdnr~y~vvy--~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisn 286 (370)
T COG5276 209 SYNTGPGTYSVSVSDNRAYLVVY--DEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISN 286 (370)
T ss_pred EEecCCceEEEEecCCeeEEEEc--ccceEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccC
Confidence 12223356777777654444433 33355566655442232221 122221112223355555555555555556554
No 499
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=73.72 E-value=1e+02 Score=30.81 Aligned_cols=145 Identities=15% Similarity=0.220 Sum_probs=76.4
Q ss_pred CEEEEecC---------CceEEEeeccccCCCCCCCCCccc-----c--cccccccEEEEEECCCCCEEEEEeCCCcEEE
Q 020798 36 RLLASSSA---------DKTLLTYSLSSISNSDSTPPSPLQ-----K--FTGHEQGVSDLVFSSDSRFLVSASDDKTIRL 99 (321)
Q Consensus 36 ~~l~~~~~---------d~~v~~~~~~~~~~~~~~~~~~~~-----~--~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~i 99 (321)
.|||+|.. .|.+.+|++-+... .+..|.. . .+..++.|..++ .-+|. |+++ ..-.|.+
T Consensus 1047 ~ylavGT~~~~gEDv~~RGr~hi~diIeVVP---epgkP~t~~KlKel~~eE~KGtVsavc-eV~G~-l~~~-~GqKI~v 1120 (1366)
T KOG1896|consen 1047 PYLAVGTAFIQGEDVPARGRIHIFDIIEVVP---EPGKPFTKNKLKELYIEEQKGTVSAVC-EVRGH-LLSS-QGQKIIV 1120 (1366)
T ss_pred ceEEEEEeecccccccCcccEEEEEEEEecC---CCCCCcccceeeeeehhhcccceEEEE-EeccE-EEEc-cCcEEEE
Confidence 47777743 47788888765321 1221111 1 123456666554 23565 4433 3457999
Q ss_pred EecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-EEEEEe--CCCCCeeEEEEccCCC--EEEE
Q 020798 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-CLKVLP--AHSDPVTAVDFNRDGT--MIVT 174 (321)
Q Consensus 100 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~--~~~~~v~~~~~~~~~~--~l~~ 174 (321)
|+++....+.-+.--.-.++.....--+++|+.|..-..|.+.-.+... .+..+. ...-.+.++.|--+|. .+++
T Consensus 1121 ~~l~r~~~ligVaFiD~~~yv~s~~~vknlIl~gDV~ksisfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flv 1200 (1366)
T KOG1896|consen 1121 RKLDRDSELIGVAFIDLPLYVHSMKVVKNLILAGDVMKSISFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLV 1200 (1366)
T ss_pred EEeccCCcceeeEEeccceeEEehhhhhhheehhhhhhceEEEEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEE
Confidence 9984433222111112222222233335677777766666665544322 222221 1223578888888776 4677
Q ss_pred EeCCCeEEEEeC
Q 020798 175 SSYDGLCRIWDA 186 (321)
Q Consensus 175 ~~~dg~i~~~d~ 186 (321)
+..++.|+++-.
T Consensus 1201 sDa~rNi~vy~Y 1212 (1366)
T KOG1896|consen 1201 SDADRNIHVYMY 1212 (1366)
T ss_pred EcCCCcEEEEEe
Confidence 888998888743
No 500
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=73.25 E-value=39 Score=32.49 Aligned_cols=79 Identities=13% Similarity=0.216 Sum_probs=50.3
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEE-eeCCC-----cEEEEecCCCE-EEEEEeCCCCCeeEEEEc
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS-GAFDE-----TVRIWDVKTGK-CLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg-----~i~~wd~~~~~-~~~~~~~~~~~v~~~~~~ 166 (321)
.+.|.+-|.........-..+...+..-+|+|||++|+- .+..+ .|++-++.+.. -...++.....|..-...
T Consensus 328 ~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~ 407 (912)
T TIGR02171 328 TGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVL 407 (912)
T ss_pred CCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEec
Confidence 357777787665543321456778889999999999887 34333 48888886532 223445555666666666
Q ss_pred cCCCEE
Q 020798 167 RDGTMI 172 (321)
Q Consensus 167 ~~~~~l 172 (321)
++|...
T Consensus 408 e~gdt~ 413 (912)
T TIGR02171 408 ENGDTV 413 (912)
T ss_pred CCCCeE
Confidence 666543
Done!