Query 020798
Match_columns 321
No_of_seqs 351 out of 2051
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 08:20:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020798.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020798hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ery_A WD repeat-containing pr 100.0 9.3E-54 3.2E-58 354.2 43.9 299 13-319 13-311 (312)
2 1vyh_C Platelet-activating fac 100.0 2E-52 6.9E-57 358.7 40.4 290 16-319 101-410 (410)
3 3ow8_A WD repeat-containing pr 100.0 8.6E-52 2.9E-56 343.3 39.6 292 15-318 24-319 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 4.3E-51 1.5E-55 342.1 42.8 292 13-317 45-340 (340)
5 2ynn_A Coatomer subunit beta'; 100.0 2.8E-51 9.7E-56 337.9 40.8 294 13-320 3-302 (304)
6 2pbi_B Guanine nucleotide-bind 100.0 8.2E-50 2.8E-54 336.0 41.9 292 14-317 55-354 (354)
7 4g56_B MGC81050 protein; prote 100.0 1.2E-49 4E-54 335.3 35.6 292 19-320 38-343 (357)
8 3frx_A Guanine nucleotide-bind 100.0 1.9E-48 6.4E-53 323.2 42.1 295 13-319 7-316 (319)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.9E-49 2E-53 329.8 38.8 299 12-320 4-335 (345)
10 3iz6_a 40S ribosomal protein R 100.0 6.2E-50 2.1E-54 340.0 32.2 296 14-320 57-375 (380)
11 4gqb_B Methylosome protein 50; 100.0 3E-48 1E-52 324.5 39.2 293 20-320 27-331 (344)
12 1erj_A Transcriptional repress 100.0 4.4E-47 1.5E-51 323.9 42.1 293 21-320 62-389 (393)
13 2hes_X YDR267CP; beta-propelle 100.0 2.1E-47 7.3E-52 318.3 38.9 294 12-320 3-328 (330)
14 2xzm_R RACK1; ribosome, transl 100.0 4.3E-47 1.5E-51 318.3 39.0 298 13-320 11-340 (343)
15 1nr0_A Actin interacting prote 100.0 3.8E-47 1.3E-51 341.7 40.8 295 13-320 49-355 (611)
16 1nr0_A Actin interacting prote 100.0 6.2E-47 2.1E-51 340.4 39.7 299 8-320 132-567 (611)
17 4aow_A Guanine nucleotide-bind 100.0 2.1E-45 7.2E-50 307.3 43.5 296 14-320 29-337 (340)
18 2ynn_A Coatomer subunit beta'; 100.0 2.1E-46 7.1E-51 308.9 35.3 253 65-320 5-259 (304)
19 2ymu_A WD-40 repeat protein; u 100.0 4.5E-45 1.5E-49 326.5 42.2 285 13-317 293-577 (577)
20 3zwl_B Eukaryotic translation 100.0 1.7E-44 5.7E-49 304.8 42.3 293 12-320 21-346 (369)
21 3dm0_A Maltose-binding peripla 100.0 1.8E-44 6.1E-49 329.2 41.2 296 14-320 373-693 (694)
22 3ei3_B DNA damage-binding prot 100.0 5.5E-45 1.9E-49 310.0 34.2 295 11-320 61-382 (383)
23 1sq9_A Antiviral protein SKI8; 100.0 1E-44 3.5E-49 309.6 35.2 297 14-320 7-395 (397)
24 1gxr_A ESG1, transducin-like e 100.0 3.2E-43 1.1E-47 293.5 43.4 285 19-318 47-335 (337)
25 1vyh_C Platelet-activating fac 100.0 3.8E-44 1.3E-48 307.3 36.6 250 66-320 101-369 (410)
26 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-43 5.8E-48 292.2 39.0 289 9-320 4-296 (313)
27 2ymu_A WD-40 repeat protein; u 100.0 2.7E-43 9.2E-48 315.0 42.8 288 13-320 252-539 (577)
28 3i2n_A WD repeat-containing pr 100.0 4.6E-44 1.6E-48 301.0 33.8 296 11-320 6-353 (357)
29 3gre_A Serine/threonine-protei 100.0 3E-44 1E-48 310.7 33.0 298 14-317 53-437 (437)
30 4e54_B DNA damage-binding prot 100.0 6.8E-45 2.3E-49 314.5 27.7 300 10-320 106-430 (435)
31 2pm9_A Protein WEB1, protein t 100.0 1E-44 3.6E-49 311.3 28.6 293 20-321 64-415 (416)
32 1k8k_C P40, ARP2/3 complex 41 100.0 3.9E-43 1.3E-47 297.1 36.5 288 19-319 4-360 (372)
33 3k26_A Polycomb protein EED; W 100.0 1.6E-43 5.4E-48 298.6 33.5 288 17-319 12-365 (366)
34 1r5m_A SIR4-interacting protei 100.0 8.4E-43 2.9E-47 299.9 38.5 291 21-319 43-424 (425)
35 3ow8_A WD repeat-containing pr 100.0 4.1E-43 1.4E-47 291.2 35.1 249 15-275 72-320 (321)
36 3vl1_A 26S proteasome regulato 100.0 1.5E-42 5.2E-47 298.3 36.0 289 19-321 94-420 (420)
37 4a11_B DNA excision repair pro 100.0 1.9E-42 6.3E-47 296.3 35.0 304 14-320 34-365 (408)
38 3mkq_A Coatomer beta'-subunit; 100.0 3.6E-42 1.2E-46 319.4 38.7 292 14-319 4-301 (814)
39 1got_B GT-beta; complex (GTP-b 100.0 2.7E-42 9.2E-47 288.7 34.1 252 14-273 88-340 (340)
40 2pm9_A Protein WEB1, protein t 100.0 1.6E-43 5.6E-48 303.9 27.2 289 22-320 11-337 (416)
41 3dwl_C Actin-related protein 2 100.0 9.6E-44 3.3E-48 301.6 24.8 285 20-318 8-377 (377)
42 4h5i_A Guanine nucleotide-exch 100.0 1.3E-42 4.3E-47 293.2 28.1 287 24-319 15-342 (365)
43 3dw8_B Serine/threonine-protei 100.0 8.4E-42 2.9E-46 296.0 33.5 291 22-319 27-445 (447)
44 2pm7_B Protein transport prote 100.0 3.1E-41 1E-45 277.1 34.4 247 68-319 4-284 (297)
45 1gxr_A ESG1, transducin-like e 100.0 4.3E-41 1.5E-45 280.5 35.4 282 22-320 8-296 (337)
46 2pbi_B Guanine nucleotide-bind 100.0 4.8E-41 1.6E-45 282.6 35.5 265 4-273 85-354 (354)
47 1pgu_A Actin interacting prote 100.0 5.3E-41 1.8E-45 302.1 36.0 294 14-318 54-364 (615)
48 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-40 3.6E-45 322.3 39.8 289 17-319 609-912 (1249)
49 4gqb_B Methylosome protein 50; 100.0 5.5E-41 1.9E-45 280.5 32.8 248 22-279 81-334 (344)
50 1yfq_A Cell cycle arrest prote 100.0 2.3E-41 7.8E-46 283.1 30.0 283 16-312 4-315 (342)
51 4ery_A WD repeat-containing pr 100.0 3.2E-40 1.1E-44 273.0 36.4 251 65-320 15-268 (312)
52 3vl1_A 26S proteasome regulato 100.0 6.5E-41 2.2E-45 288.2 33.1 281 25-320 58-365 (420)
53 4aez_A CDC20, WD repeat-contai 100.0 3.4E-40 1.2E-44 282.2 37.3 282 20-320 88-380 (401)
54 4gga_A P55CDC, cell division c 100.0 3.9E-40 1.3E-44 283.5 37.6 278 26-319 108-394 (420)
55 3f3f_A Nucleoporin SEH1; struc 100.0 4.9E-41 1.7E-45 281.1 31.1 297 15-320 3-337 (351)
56 3v7d_B Cell division control p 100.0 4.9E-40 1.7E-44 286.4 38.6 283 15-320 113-421 (464)
57 2hes_X YDR267CP; beta-propelle 100.0 1.2E-40 4E-45 277.6 32.0 259 14-276 47-328 (330)
58 3iz6_a 40S ribosomal protein R 100.0 3.7E-41 1.3E-45 286.0 29.3 271 4-278 87-377 (380)
59 3fm0_A Protein CIAO1; WDR39,SG 100.0 4E-40 1.4E-44 276.1 34.7 250 65-319 7-282 (345)
60 1p22_A F-BOX/WD-repeat protein 100.0 5.9E-40 2E-44 283.7 36.1 274 19-320 129-414 (435)
61 3frx_A Guanine nucleotide-bind 100.0 1.4E-39 4.9E-44 269.8 36.3 245 66-319 10-266 (319)
62 4g56_B MGC81050 protein; prote 100.0 4.2E-41 1.4E-45 283.2 27.3 275 29-320 11-301 (357)
63 2pm7_B Protein transport prote 100.0 7.1E-40 2.4E-44 269.0 33.3 251 17-276 3-285 (297)
64 1pgu_A Actin interacting prote 100.0 1.7E-39 5.9E-44 292.2 38.7 293 12-321 192-615 (615)
65 3mmy_A MRNA export factor; mRN 100.0 6.6E-40 2.3E-44 276.5 33.7 300 10-319 26-348 (368)
66 4ggc_A P55CDC, cell division c 100.0 4.6E-39 1.6E-43 266.3 37.7 278 26-319 28-314 (318)
67 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.8E-39 2.3E-43 277.8 40.3 283 13-321 149-443 (445)
68 1erj_A Transcriptional repress 100.0 2E-39 6.9E-44 276.6 35.9 242 71-320 62-341 (393)
69 2j04_B YDR362CP, TAU91; beta p 100.0 3.5E-41 1.2E-45 295.3 25.6 296 17-321 201-518 (524)
70 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.8E-39 1.6E-43 278.7 38.0 279 15-320 110-391 (445)
71 3bg1_A Protein SEC13 homolog; 100.0 7.6E-41 2.6E-45 277.1 25.3 247 68-319 8-292 (316)
72 2aq5_A Coronin-1A; WD40 repeat 100.0 9.1E-40 3.1E-44 279.6 31.2 285 25-320 36-342 (402)
73 2xzm_R RACK1; ribosome, transl 100.0 5.7E-39 1.9E-43 268.9 35.4 246 66-319 14-284 (343)
74 3bg1_A Protein SEC13 homolog; 100.0 2.7E-40 9.1E-45 273.8 24.2 250 16-275 6-292 (316)
75 2oaj_A Protein SNI1; WD40 repe 100.0 3.2E-39 1.1E-43 300.6 34.2 214 9-236 5-247 (902)
76 3v7d_B Cell division control p 100.0 3.8E-38 1.3E-42 274.5 38.7 291 4-316 141-459 (464)
77 3sfz_A APAF-1, apoptotic pepti 100.0 8.7E-39 3E-43 309.0 38.0 294 13-320 647-1034(1249)
78 2oaj_A Protein SNI1; WD40 repe 100.0 7.2E-39 2.5E-43 298.2 34.6 160 21-191 56-245 (902)
79 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.1E-38 7.3E-43 275.0 33.9 293 24-319 5-390 (450)
80 3jrp_A Fusion protein of prote 100.0 2.9E-38 1E-42 267.6 33.4 250 65-319 3-286 (379)
81 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-37 4.8E-42 263.0 33.0 246 69-320 4-274 (372)
82 3jrp_A Fusion protein of prote 100.0 1E-37 3.6E-42 264.2 31.3 253 15-276 3-287 (379)
83 2j04_B YDR362CP, TAU91; beta p 100.0 3E-39 1E-43 283.1 20.6 261 22-319 132-427 (524)
84 4aow_A Guanine nucleotide-bind 100.0 2E-36 6.8E-41 252.8 36.4 248 66-320 31-286 (340)
85 3dm0_A Maltose-binding peripla 100.0 6.8E-37 2.3E-41 279.2 36.4 246 68-320 377-632 (694)
86 3dwl_C Actin-related protein 2 100.0 3.3E-39 1.1E-43 273.7 19.5 243 70-319 8-280 (377)
87 2j04_A TAU60, YPL007P, hypothe 100.0 9E-38 3.1E-42 268.5 28.1 266 18-319 10-296 (588)
88 3mkq_A Coatomer beta'-subunit; 100.0 4E-37 1.4E-41 285.6 33.7 252 65-320 5-259 (814)
89 1sq9_A Antiviral protein SKI8; 100.0 3.9E-37 1.3E-41 262.6 31.0 259 13-278 52-397 (397)
90 3gre_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 272.0 24.2 273 30-320 34-359 (437)
91 3zwl_B Eukaryotic translation 100.0 3.8E-36 1.3E-40 253.6 35.4 250 66-320 25-304 (369)
92 4aez_A CDC20, WD repeat-contai 100.0 5.1E-36 1.7E-40 256.3 34.0 248 21-283 132-387 (401)
93 4gq1_A NUP37; propeller, trans 100.0 1.7E-37 5.7E-42 264.6 24.6 237 79-318 95-387 (393)
94 2xyi_A Probable histone-bindin 100.0 1.7E-36 5.7E-41 261.6 31.1 247 68-320 123-410 (430)
95 1r5m_A SIR4-interacting protei 100.0 1.7E-35 5.9E-40 254.2 34.9 243 70-319 42-360 (425)
96 3dw8_B Serine/threonine-protei 100.0 2.2E-36 7.5E-41 262.0 28.0 243 71-320 26-373 (447)
97 3jro_A Fusion protein of prote 100.0 1.6E-36 5.5E-41 278.5 28.7 248 67-319 3-284 (753)
98 3k26_A Polycomb protein EED; W 100.0 1.5E-36 5E-41 256.0 25.9 245 69-320 14-318 (366)
99 3jro_A Fusion protein of prote 100.0 4.4E-37 1.5E-41 282.2 23.7 252 16-276 2-285 (753)
100 3i2n_A WD repeat-containing pr 100.0 6.3E-36 2.2E-40 251.3 28.5 247 67-319 12-290 (357)
101 3odt_A Protein DOA1; ubiquitin 100.0 6.6E-35 2.3E-39 240.7 34.0 242 64-320 9-255 (313)
102 4gga_A P55CDC, cell division c 100.0 3.1E-35 1.1E-39 252.9 32.0 258 18-290 142-409 (420)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-35 3.9E-40 254.2 28.6 257 17-279 75-345 (402)
104 3vu4_A KMHSV2; beta-propeller 100.0 3.4E-35 1.2E-39 247.0 30.8 285 10-319 6-335 (355)
105 3ei3_B DNA damage-binding prot 100.0 3E-35 1E-39 250.0 30.4 245 65-320 65-339 (383)
106 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-36 6.4E-41 253.7 22.3 268 29-317 42-330 (343)
107 1yfq_A Cell cycle arrest prote 100.0 1.6E-35 5.6E-40 247.5 26.9 241 69-320 7-282 (342)
108 2xyi_A Probable histone-bindin 100.0 4.8E-35 1.6E-39 252.5 30.3 257 17-277 122-411 (430)
109 3bws_A Protein LP49; two-domai 100.0 4.8E-34 1.7E-38 246.3 36.5 293 15-320 115-432 (433)
110 2j04_A TAU60, YPL007P, hypothe 100.0 3.6E-35 1.2E-39 252.5 27.8 275 2-307 34-350 (588)
111 1p22_A F-BOX/WD-repeat protein 100.0 7.4E-34 2.5E-38 245.5 35.4 234 69-319 129-364 (435)
112 4e54_B DNA damage-binding prot 100.0 9.2E-35 3.1E-39 251.1 27.0 248 68-320 114-387 (435)
113 3mmy_A MRNA export factor; mRN 100.0 9.5E-34 3.3E-38 238.8 32.5 252 62-320 28-304 (368)
114 4a11_B DNA excision repair pro 100.0 6.5E-34 2.2E-38 243.2 31.8 283 20-319 96-404 (408)
115 4h5i_A Guanine nucleotide-exch 100.0 1.5E-34 5.2E-39 243.8 24.2 252 18-276 68-343 (365)
116 2w18_A PALB2, fancn, partner a 100.0 2E-33 6.8E-38 227.6 28.6 251 13-319 76-356 (356)
117 1l0q_A Surface layer protein; 100.0 7.4E-32 2.5E-36 229.6 37.8 265 36-320 3-275 (391)
118 3lrv_A PRE-mRNA-splicing facto 100.0 6E-34 2.1E-38 238.4 20.7 231 80-320 43-292 (343)
119 4ggc_A P55CDC, cell division c 100.0 4.9E-32 1.7E-36 224.0 31.9 244 19-277 63-316 (318)
120 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-32 5.3E-37 230.8 29.2 238 65-320 11-271 (355)
121 1l0q_A Surface layer protein; 100.0 1.4E-30 4.8E-35 221.7 41.6 259 13-289 22-288 (391)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-32 5.3E-37 238.2 29.8 239 74-318 5-337 (450)
123 3bws_A Protein LP49; two-domai 100.0 6.8E-31 2.3E-35 226.6 32.4 287 22-320 59-390 (433)
124 3f3f_A Nucleoporin SEH1; struc 100.0 4.4E-31 1.5E-35 220.6 29.4 236 67-305 5-278 (351)
125 4gq1_A NUP37; propeller, trans 100.0 4.1E-32 1.4E-36 231.4 19.3 247 21-275 87-388 (393)
126 1nir_A Nitrite reductase; hemo 100.0 2.5E-29 8.4E-34 221.9 32.3 279 30-320 144-458 (543)
127 2w18_A PALB2, fancn, partner a 100.0 9.2E-30 3.1E-34 206.3 27.0 218 21-274 109-355 (356)
128 1nir_A Nitrite reductase; hemo 100.0 7.7E-28 2.6E-32 212.4 35.8 292 15-320 171-514 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 9E-29 3.1E-33 212.0 28.1 265 17-300 111-410 (415)
130 2ecf_A Dipeptidyl peptidase IV 100.0 1.8E-28 6.2E-33 225.4 30.0 285 23-319 36-412 (741)
131 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.5E-28 8.7E-33 209.2 25.2 280 22-319 61-386 (415)
132 1ri6_A Putative isomerase YBHE 100.0 1.1E-26 3.6E-31 194.0 30.4 272 37-319 7-307 (343)
133 3vgz_A Uncharacterized protein 100.0 2.7E-25 9.2E-30 186.3 37.3 271 23-308 40-334 (353)
134 3u4y_A Uncharacterized protein 100.0 6.5E-26 2.2E-30 188.5 32.4 276 29-320 3-304 (331)
135 2ojh_A Uncharacterized protein 100.0 1.6E-26 5.4E-31 188.6 23.5 253 40-309 17-293 (297)
136 1xfd_A DIP, dipeptidyl aminope 100.0 4.1E-27 1.4E-31 215.8 21.6 284 25-319 18-392 (723)
137 2z3z_A Dipeptidyl aminopeptida 100.0 8.3E-26 2.9E-30 206.6 29.4 281 24-320 82-435 (706)
138 2ecf_A Dipeptidyl peptidase IV 100.0 1.1E-25 3.9E-30 206.8 29.4 282 25-319 110-458 (741)
139 1k32_A Tricorn protease; prote 99.9 5.7E-25 2E-29 208.9 29.1 279 17-317 197-499 (1045)
140 3hfq_A Uncharacterized protein 99.9 5E-24 1.7E-28 178.4 31.1 270 43-319 14-316 (347)
141 2z3z_A Dipeptidyl aminopeptida 99.9 9.2E-25 3.1E-29 199.7 28.6 279 26-319 28-390 (706)
142 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-25 1.1E-29 203.3 25.5 283 15-306 49-428 (723)
143 1pby_B Quinohemoprotein amine 99.9 1.8E-24 6E-29 180.0 27.3 263 36-320 2-310 (337)
144 1ri6_A Putative isomerase YBHE 99.9 8.9E-24 3E-28 176.2 31.4 269 21-300 35-335 (343)
145 1k32_A Tricorn protease; prote 99.9 2.3E-24 7.7E-29 204.8 30.1 275 22-320 294-637 (1045)
146 3o4h_A Acylamino-acid-releasin 99.9 8.9E-25 3.1E-29 195.5 25.8 274 23-319 21-314 (582)
147 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-23 3.5E-28 181.3 27.5 208 23-232 36-279 (434)
148 3u4y_A Uncharacterized protein 99.9 6.9E-23 2.4E-27 170.2 31.6 274 14-299 31-326 (331)
149 3pe7_A Oligogalacturonate lyas 99.9 6.1E-24 2.1E-28 180.5 24.0 293 15-319 22-381 (388)
150 3scy_A Hypothetical bacterial 99.9 1.4E-22 4.9E-27 170.5 31.0 276 34-319 12-336 (361)
151 3vgz_A Uncharacterized protein 99.9 1.5E-22 5.3E-27 169.5 30.5 243 73-320 40-303 (353)
152 2ojh_A Uncharacterized protein 99.9 2.7E-23 9.1E-28 169.4 22.0 233 18-266 36-292 (297)
153 1pby_B Quinohemoprotein amine 99.9 1.4E-22 4.8E-27 168.5 26.2 245 25-287 35-321 (337)
154 1jmx_B Amine dehydrogenase; ox 99.9 6.5E-22 2.2E-26 165.4 27.1 234 79-320 5-325 (349)
155 3hfq_A Uncharacterized protein 99.9 1.4E-21 4.8E-26 163.5 28.1 249 21-279 37-322 (347)
156 1z68_A Fibroblast activation p 99.9 6.9E-23 2.4E-27 187.7 21.6 281 25-319 61-442 (719)
157 2oit_A Nucleoporin 214KDA; NH2 99.9 2.6E-22 8.9E-27 172.6 23.2 230 74-307 37-321 (434)
158 1jmx_B Amine dehydrogenase; ox 99.9 8.7E-22 3E-26 164.6 25.8 241 28-286 4-335 (349)
159 1jof_A Carboxy-CIS,CIS-muconat 99.9 1E-21 3.4E-26 165.6 25.7 244 74-320 40-341 (365)
160 3scy_A Hypothetical bacterial 99.9 9.3E-21 3.2E-25 159.4 31.6 265 22-296 48-360 (361)
161 1z68_A Fibroblast activation p 99.9 1.7E-22 5.7E-27 185.2 18.6 277 28-319 20-390 (719)
162 3c5m_A Oligogalacturonate lyas 99.9 8.5E-22 2.9E-26 167.6 20.5 275 26-318 38-380 (396)
163 3o4h_A Acylamino-acid-releasin 99.9 8.7E-22 3E-26 176.1 20.3 231 73-318 21-274 (582)
164 3azo_A Aminopeptidase; POP fam 99.9 5.4E-21 1.8E-25 173.6 23.3 290 17-318 17-367 (662)
165 3fvz_A Peptidyl-glycine alpha- 99.9 1.1E-18 3.8E-23 144.8 33.5 242 73-320 23-322 (329)
166 1jof_A Carboxy-CIS,CIS-muconat 99.9 6.2E-20 2.1E-24 154.6 25.9 245 22-277 38-342 (365)
167 1q7f_A NHL, brain tumor CG1071 99.9 5E-18 1.7E-22 138.0 32.5 241 71-320 27-280 (286)
168 1q7f_A NHL, brain tumor CG1071 99.9 7.2E-18 2.5E-22 137.0 32.5 248 20-276 26-280 (286)
169 2oiz_A Aromatic amine dehydrog 99.9 1.3E-18 4.3E-23 146.2 28.6 267 15-300 43-360 (361)
170 4a5s_A Dipeptidyl peptidase 4 99.9 7.1E-20 2.4E-24 168.1 21.9 239 76-319 19-352 (740)
171 4a5s_A Dipeptidyl peptidase 4 99.8 1.5E-19 5.3E-24 165.9 22.4 280 25-318 18-396 (740)
172 2dg1_A DRP35, lactonase; beta 99.8 3E-18 1E-22 142.4 27.5 268 25-307 7-299 (333)
173 3fvz_A Peptidyl-glycine alpha- 99.8 8.4E-18 2.9E-22 139.5 29.7 242 22-276 22-322 (329)
174 2xdw_A Prolyl endopeptidase; a 99.8 4.2E-18 1.4E-22 155.7 30.0 245 71-319 122-413 (710)
175 3azo_A Aminopeptidase; POP fam 99.8 1.8E-18 6.2E-23 157.0 27.4 267 17-296 61-389 (662)
176 3pe7_A Oligogalacturonate lyas 99.8 1.1E-18 3.9E-23 147.9 22.6 251 66-320 23-329 (388)
177 2z2n_A Virginiamycin B lyase; 99.8 1.7E-15 5.7E-20 123.6 40.5 281 19-319 10-294 (299)
178 2oiz_A Aromatic amine dehydrog 99.8 3.4E-18 1.2E-22 143.5 24.7 270 33-320 13-334 (361)
179 2gop_A Trilobed protease; beta 99.8 1.6E-17 5.4E-22 138.8 28.4 259 23-318 14-329 (347)
180 2bkl_A Prolyl endopeptidase; m 99.8 1.1E-17 3.6E-22 152.6 24.9 279 31-320 75-397 (695)
181 1qks_A Cytochrome CD1 nitrite 99.8 7.5E-16 2.6E-20 135.9 35.3 275 33-319 165-476 (567)
182 3e5z_A Putative gluconolactona 99.8 3.4E-16 1.2E-20 127.8 28.8 228 67-306 21-275 (296)
183 3e5z_A Putative gluconolactona 99.8 3.9E-16 1.3E-20 127.5 28.6 242 17-278 21-288 (296)
184 2xdw_A Prolyl endopeptidase; a 99.8 1.7E-16 5.9E-21 145.0 28.3 245 21-278 122-416 (710)
185 1rwi_B Serine/threonine-protei 99.8 2.4E-16 8.2E-21 126.8 25.5 239 75-320 25-264 (270)
186 3no2_A Uncharacterized protein 99.8 5.6E-16 1.9E-20 124.9 27.6 214 84-306 4-231 (276)
187 3c5m_A Oligogalacturonate lyas 99.8 4.1E-18 1.4E-22 144.8 15.4 237 76-319 38-328 (396)
188 2bkl_A Prolyl endopeptidase; m 99.8 1.2E-16 4.1E-21 145.7 25.0 246 21-279 118-400 (695)
189 2qc5_A Streptogramin B lactona 99.8 8.1E-14 2.8E-18 113.6 38.0 280 20-319 16-299 (300)
190 1qks_A Cytochrome CD1 nitrite 99.8 3E-14 1E-18 125.7 37.3 284 25-319 198-537 (567)
191 1rwi_B Serine/threonine-protei 99.8 1E-15 3.4E-20 123.2 25.9 241 25-278 25-266 (270)
192 1yr2_A Prolyl oligopeptidase; 99.8 6.4E-16 2.2E-20 141.9 27.3 279 32-319 115-440 (741)
193 2dg1_A DRP35, lactonase; beta 99.8 1.5E-14 5E-19 120.1 32.9 248 5-266 27-300 (333)
194 3no2_A Uncharacterized protein 99.8 3E-15 1E-19 120.6 27.8 240 33-287 3-263 (276)
195 2gop_A Trilobed protease; beta 99.7 8.7E-16 3E-20 128.2 24.5 219 74-319 15-290 (347)
196 3dsm_A Uncharacterized protein 99.7 7.7E-15 2.6E-19 121.5 28.5 266 42-319 14-301 (328)
197 2z2n_A Virginiamycin B lyase; 99.7 8.5E-14 2.9E-18 113.4 34.0 238 72-318 13-253 (299)
198 3dsm_A Uncharacterized protein 99.7 7.8E-15 2.7E-19 121.5 26.0 252 25-295 45-319 (328)
199 2mad_H Methylamine dehydrogena 99.7 3E-13 1E-17 113.7 34.1 273 30-320 27-350 (373)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 9.9E-14 3.4E-18 114.0 27.9 237 74-319 18-298 (314)
201 1yr2_A Prolyl oligopeptidase; 99.7 2.4E-14 8.2E-19 131.5 26.0 244 21-278 160-443 (741)
202 3hrp_A Uncharacterized protein 99.7 2.5E-13 8.4E-18 115.7 30.0 239 74-319 131-409 (409)
203 2qc5_A Streptogramin B lactona 99.7 2.8E-12 9.7E-17 104.3 34.4 238 73-319 19-259 (300)
204 3sjl_D Methylamine dehydrogena 99.6 4.5E-13 1.5E-17 111.5 26.2 272 29-319 38-362 (386)
205 3hrp_A Uncharacterized protein 99.6 2.7E-12 9.1E-17 109.3 31.0 239 23-274 130-408 (409)
206 1xip_A Nucleoporin NUP159; bet 99.6 2.4E-14 8.2E-19 119.5 17.0 181 25-219 39-232 (388)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.9E-12 6.7E-17 106.2 27.9 244 20-276 14-299 (314)
208 3c75_H MADH, methylamine dehyd 99.6 2.7E-13 9.4E-18 114.7 22.5 268 33-319 82-401 (426)
209 2mad_H Methylamine dehydrogena 99.6 1.5E-11 5.2E-16 103.3 32.8 244 28-283 70-357 (373)
210 3g4e_A Regucalcin; six bladed 99.6 4.1E-12 1.4E-16 103.6 28.6 221 76-306 15-260 (297)
211 3sjl_D Methylamine dehydrogena 99.6 2.8E-12 9.5E-17 106.7 26.4 254 28-298 82-384 (386)
212 3dr2_A Exported gluconolactona 99.6 3.7E-12 1.3E-16 104.3 26.2 226 68-306 39-295 (305)
213 2qe8_A Uncharacterized protein 99.6 1.8E-12 6E-17 108.0 22.7 262 24-306 17-309 (343)
214 3g4e_A Regucalcin; six bladed 99.5 8.7E-11 3E-15 95.7 29.5 226 20-261 9-257 (297)
215 1xip_A Nucleoporin NUP159; bet 99.5 8.8E-13 3E-17 110.1 17.7 174 75-262 39-230 (388)
216 3iuj_A Prolyl endopeptidase; h 99.5 8.2E-12 2.8E-16 113.7 25.3 239 71-319 126-404 (693)
217 3dr2_A Exported gluconolactona 99.5 1.5E-11 5.3E-16 100.6 24.7 228 19-267 40-298 (305)
218 2ghs_A AGR_C_1268P; regucalcin 99.5 6.6E-11 2.3E-15 97.8 28.5 219 76-306 51-290 (326)
219 3iuj_A Prolyl endopeptidase; h 99.5 6.1E-12 2.1E-16 114.6 23.7 241 21-278 126-407 (693)
220 3c75_H MADH, methylamine dehyd 99.5 2.5E-11 8.6E-16 102.7 25.5 240 28-283 122-409 (426)
221 2hz6_A Endoplasmic reticulum t 99.4 4.7E-14 1.6E-18 118.6 4.9 204 84-301 8-217 (369)
222 1yiq_A Quinohemoprotein alcoho 99.4 2E-10 6.8E-15 104.2 27.7 257 35-304 121-534 (689)
223 2ghs_A AGR_C_1268P; regucalcin 99.4 1.1E-09 3.8E-14 90.3 30.1 220 24-261 49-287 (326)
224 3hxj_A Pyrrolo-quinoline quino 99.4 3.6E-10 1.2E-14 93.3 23.6 267 22-320 58-324 (330)
225 2ece_A 462AA long hypothetical 99.4 1.2E-09 3.9E-14 91.9 26.0 223 83-306 93-399 (462)
226 1kb0_A Quinohemoprotein alcoho 99.3 1.3E-09 4.3E-14 98.8 27.2 257 34-304 127-536 (677)
227 1mda_H Methylamine dehydrogena 99.3 1.4E-10 5E-15 96.5 19.4 218 96-320 47-346 (368)
228 3q7m_A Lipoprotein YFGL, BAMB; 99.3 3.4E-09 1.2E-13 89.2 28.0 260 34-317 102-375 (376)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1E-09 3.5E-14 92.4 24.6 262 34-319 52-336 (376)
230 1mda_H Methylamine dehydrogena 99.3 2.3E-10 7.9E-15 95.3 19.8 245 28-297 69-366 (368)
231 1npe_A Nidogen, entactin; glyc 99.3 2.6E-08 8.9E-13 79.6 31.0 221 74-300 36-263 (267)
232 1kb0_A Quinohemoprotein alcoho 99.3 1.4E-09 4.9E-14 98.4 25.5 232 84-320 127-507 (677)
233 1yiq_A Quinohemoprotein alcoho 99.3 1.1E-09 3.7E-14 99.4 24.0 281 35-320 70-505 (689)
234 1fwx_A Nitrous oxide reductase 99.3 1.2E-09 4E-14 95.0 22.9 220 83-309 99-409 (595)
235 2qe8_A Uncharacterized protein 99.3 3.8E-10 1.3E-14 93.9 18.1 224 74-318 17-276 (343)
236 2hz6_A Endoplasmic reticulum t 99.3 1.7E-12 5.7E-17 109.2 2.9 188 34-239 8-200 (369)
237 2iwa_A Glutamine cyclotransfer 99.2 2.4E-08 8.1E-13 78.9 25.8 197 76-277 23-238 (266)
238 2iwa_A Glutamine cyclotransfer 99.2 1.8E-08 6.3E-13 79.5 24.4 195 117-318 22-235 (266)
239 3hxj_A Pyrrolo-quinoline quino 99.2 2.5E-09 8.4E-14 88.2 19.2 260 27-318 23-282 (330)
240 3nol_A Glutamine cyclotransfer 99.2 3.7E-08 1.3E-12 76.9 22.8 183 117-306 44-243 (262)
241 2fp8_A Strictosidine synthase; 99.1 7.4E-08 2.5E-12 79.2 25.6 246 24-276 19-313 (322)
242 2ece_A 462AA long hypothetical 99.1 1.3E-07 4.5E-12 79.6 24.8 193 125-319 93-351 (462)
243 3nok_A Glutaminyl cyclase; bet 99.1 5.4E-08 1.8E-12 76.0 20.8 180 117-305 56-253 (268)
244 3mbr_X Glutamine cyclotransfer 99.1 4.2E-07 1.4E-11 70.3 25.4 183 116-305 21-222 (243)
245 2fp8_A Strictosidine synthase; 99.1 3.6E-07 1.2E-11 75.1 27.0 234 75-320 20-313 (322)
246 4a2l_A BT_4663, two-component 99.0 5.2E-06 1.8E-10 76.9 36.3 271 23-305 309-603 (795)
247 1npe_A Nidogen, entactin; glyc 99.0 2.6E-06 9E-11 67.9 29.7 225 86-319 2-237 (267)
248 1k3i_A Galactose oxidase precu 99.0 5.9E-08 2E-12 87.8 22.2 271 28-307 190-530 (656)
249 1kv9_A Type II quinohemoprotei 99.0 7.1E-07 2.4E-11 80.8 29.0 261 35-305 117-519 (668)
250 3nol_A Glutamine cyclotransfer 99.0 1.1E-07 3.9E-12 74.1 20.2 159 76-240 45-210 (262)
251 4a2l_A BT_4663, two-component 99.0 7.3E-06 2.5E-10 75.9 35.0 277 26-319 175-479 (795)
252 1kv9_A Type II quinohemoprotei 99.0 1.4E-07 4.7E-12 85.4 22.9 231 85-319 117-487 (668)
253 2p4o_A Hypothetical protein; p 99.0 6.7E-06 2.3E-10 66.9 31.3 224 74-306 32-276 (306)
254 3nok_A Glutaminyl cyclase; bet 99.0 7.3E-07 2.5E-11 69.7 22.9 157 76-240 57-219 (268)
255 1fwx_A Nitrous oxide reductase 99.0 2.8E-07 9.6E-12 80.3 22.5 186 126-320 100-361 (595)
256 2ad6_A Methanol dehydrogenase 98.9 1.2E-06 4.2E-11 77.6 26.9 259 35-306 115-525 (571)
257 2p4o_A Hypothetical protein; p 98.9 4.8E-06 1.6E-10 67.9 28.4 209 11-235 20-245 (306)
258 3tc9_A Hypothetical hydrolase; 98.9 2E-06 6.8E-11 73.6 25.8 240 75-319 138-429 (430)
259 1flg_A Protein (quinoprotein e 98.9 2.4E-06 8.3E-11 75.9 26.8 163 137-304 291-545 (582)
260 3mbr_X Glutamine cyclotransfer 98.9 1.8E-06 6.2E-11 66.8 22.6 157 76-239 23-187 (243)
261 1w6s_A Methanol dehydrogenase 98.9 2.6E-06 8.9E-11 75.7 25.7 206 93-303 180-531 (599)
262 3v64_C Agrin; beta propeller, 98.9 2.5E-05 8.4E-10 64.9 30.8 206 74-284 73-283 (349)
263 3v9f_A Two-component system se 98.8 3.2E-05 1.1E-09 71.4 32.8 274 23-305 312-600 (781)
264 1k3i_A Galactose oxidase precu 98.8 1E-06 3.5E-11 79.8 21.5 243 78-320 190-497 (656)
265 4hw6_A Hypothetical protein, I 98.8 1.1E-05 3.9E-10 68.9 26.6 239 75-319 140-432 (433)
266 2xe4_A Oligopeptidase B; hydro 98.8 2.5E-06 8.4E-11 78.4 23.9 194 75-274 175-398 (751)
267 3v65_B Low-density lipoprotein 98.8 4.3E-05 1.5E-09 64.4 29.2 216 74-294 116-336 (386)
268 2ad6_A Methanol dehydrogenase 98.8 8.6E-06 2.9E-10 72.2 26.0 155 85-239 115-343 (571)
269 3v9f_A Two-component system se 98.8 0.00012 3.9E-09 67.8 36.1 285 24-319 258-567 (781)
270 3qqz_A Putative uncharacterize 98.8 2.9E-05 9.8E-10 60.9 25.7 202 17-229 20-251 (255)
271 2xe4_A Oligopeptidase B; hydro 98.7 2E-06 6.9E-11 79.0 21.6 194 25-229 175-398 (751)
272 3qqz_A Putative uncharacterize 98.7 4.4E-05 1.5E-09 59.9 25.0 201 110-317 21-250 (255)
273 1w6s_A Methanol dehydrogenase 98.7 1.8E-05 6.3E-10 70.3 25.5 198 85-284 62-350 (599)
274 3p5b_L Low density lipoprotein 98.7 0.00012 4.2E-09 61.8 33.5 216 73-293 111-337 (400)
275 3tc9_A Hypothetical hydrolase; 98.7 4.3E-05 1.5E-09 65.3 26.1 152 25-187 138-300 (430)
276 4hw6_A Hypothetical protein, I 98.6 8.1E-05 2.8E-09 63.6 27.1 201 24-234 139-376 (433)
277 1ijq_A LDL receptor, low-densi 98.6 0.00014 4.8E-09 59.4 32.1 205 74-283 30-245 (316)
278 3kya_A Putative phosphatase; s 98.6 0.00019 6.5E-09 61.8 27.0 242 75-321 140-476 (496)
279 3m0c_C LDL receptor, low-densi 98.5 0.00068 2.3E-08 62.3 31.1 208 73-283 423-639 (791)
280 3amr_A 3-phytase; beta-propell 98.5 9.7E-05 3.3E-09 60.3 22.3 185 126-319 39-262 (355)
281 1flg_A Protein (quinoprotein e 98.5 0.00018 6.1E-09 64.0 26.1 156 85-240 117-364 (582)
282 3v64_C Agrin; beta propeller, 98.5 0.00033 1.1E-08 58.1 29.8 232 77-317 37-272 (349)
283 3v65_B Low-density lipoprotein 98.5 0.00042 1.4E-08 58.3 29.7 232 77-317 80-315 (386)
284 3sov_A LRP-6, low-density lipo 98.4 0.00042 1.4E-08 56.6 28.1 204 75-283 36-245 (318)
285 2xbg_A YCF48-like protein; pho 98.4 0.00046 1.6E-08 56.6 31.2 276 23-317 35-319 (327)
286 2ism_A Putative oxidoreductase 98.4 0.00054 1.9E-08 56.8 25.6 223 75-306 32-333 (352)
287 3amr_A 3-phytase; beta-propell 98.3 0.00061 2.1E-08 55.6 23.5 199 78-283 30-271 (355)
288 3p5b_L Low density lipoprotein 98.3 0.00099 3.4E-08 56.3 30.3 212 23-240 111-329 (400)
289 1n7d_A LDL receptor, low-densi 98.3 1.1E-05 3.8E-10 73.2 14.0 216 75-295 407-633 (699)
290 2p9w_A MAL S 1 allergenic prot 98.3 0.00085 2.9E-08 54.3 25.0 198 76-276 15-265 (334)
291 3sov_A LRP-6, low-density lipo 98.3 0.00095 3.3E-08 54.5 25.5 207 24-239 35-246 (318)
292 2vpj_A Kelch-like protein 12; 98.2 0.00068 2.3E-08 54.7 22.3 227 84-320 14-278 (301)
293 3m0c_C LDL receptor, low-densi 98.2 0.0037 1.3E-07 57.5 28.4 209 23-238 423-639 (791)
294 1ijq_A LDL receptor, low-densi 98.1 0.002 6.8E-08 52.5 32.3 218 94-318 9-236 (316)
295 2p9w_A MAL S 1 allergenic prot 98.1 0.002 6.9E-08 52.1 22.5 163 116-278 13-217 (334)
296 3s94_A LRP-6, low-density lipo 98.1 0.0046 1.6E-07 55.3 25.9 203 74-281 40-248 (619)
297 3ii7_A Kelch-like protein 7; p 98.1 0.0027 9.2E-08 51.3 24.0 227 86-320 13-272 (306)
298 3kya_A Putative phosphatase; s 98.1 0.0043 1.5E-07 53.5 26.8 206 25-239 140-416 (496)
299 2xbg_A YCF48-like protein; pho 98.0 0.0045 1.5E-07 50.7 27.2 232 23-273 79-319 (327)
300 2xn4_A Kelch-like protein 2; s 98.0 0.0042 1.4E-07 50.1 23.6 225 86-320 17-276 (302)
301 1n7d_A LDL receptor, low-densi 98.0 0.00014 4.8E-09 66.1 13.9 210 24-239 406-622 (699)
302 4a0p_A LRP6, LRP-6, low-densit 97.9 0.011 3.9E-07 52.9 29.0 202 74-282 37-243 (628)
303 1zgk_A Kelch-like ECH-associat 97.9 0.0054 1.8E-07 49.7 21.3 226 84-320 24-287 (308)
304 2vpj_A Kelch-like protein 12; 97.9 0.0068 2.3E-07 48.8 23.5 189 84-278 62-280 (301)
305 3s94_A LRP-6, low-density lipo 97.8 0.015 5E-07 52.1 33.6 158 24-190 84-245 (619)
306 3ei3_A DNA damage-binding prot 97.8 0.033 1.1E-06 53.5 33.3 280 23-320 553-913 (1158)
307 3a9g_A Putative uncharacterize 97.7 0.014 4.7E-07 48.4 26.7 225 75-305 30-329 (354)
308 2xn4_A Kelch-like protein 2; s 97.7 0.014 4.9E-07 46.9 22.5 186 84-278 61-278 (302)
309 1zgk_A Kelch-like ECH-associat 97.5 0.023 7.7E-07 45.9 21.1 186 84-278 70-289 (308)
310 3ii7_A Kelch-like protein 7; p 97.5 0.025 8.7E-07 45.5 25.2 188 84-278 55-274 (306)
311 2g8s_A Glucose/sorbosone dehyd 97.5 0.031 1.1E-06 46.2 25.4 225 75-305 19-340 (353)
312 1tl2_A L10, protein (tachylect 97.5 0.018 6.1E-07 43.6 16.3 140 74-222 41-201 (236)
313 2uvk_A YJHT; unknown function, 97.4 0.024 8.3E-07 46.8 18.9 220 84-311 19-329 (357)
314 4asc_A Kelch repeat and BTB do 97.4 0.034 1.2E-06 45.0 23.6 211 88-308 8-253 (315)
315 2woz_A Kelch repeat and BTB do 97.4 0.042 1.4E-06 44.6 22.4 224 87-320 18-287 (318)
316 4a0p_A LRP6, LRP-6, low-densit 97.3 0.082 2.8E-06 47.4 30.9 200 74-279 340-552 (628)
317 2g8s_A Glucose/sorbosone dehyd 97.3 0.053 1.8E-06 44.8 24.6 148 23-174 17-214 (353)
318 3sre_A PON1, serum paraoxonase 97.2 0.065 2.2E-06 44.2 22.0 154 74-231 50-252 (355)
319 4asc_A Kelch repeat and BTB do 97.2 0.068 2.3E-06 43.2 21.5 191 82-278 43-279 (315)
320 3sre_A PON1, serum paraoxonase 97.1 0.08 2.7E-06 43.6 25.7 197 25-230 51-297 (355)
321 2ism_A Putative oxidoreductase 97.1 0.088 3E-06 43.5 23.3 106 23-134 30-153 (352)
322 3pbp_A Nucleoporin NUP82; beta 97.1 0.034 1.1E-06 46.6 15.4 108 75-184 67-208 (452)
323 2zwa_A Leucine carboxyl methyl 97.1 0.17 5.7E-06 46.1 21.7 222 83-307 396-674 (695)
324 2uvk_A YJHT; unknown function, 97.0 0.099 3.4E-06 43.0 19.5 141 137-281 168-347 (357)
325 2be1_A Serine/threonine-protei 96.9 0.025 8.7E-07 46.2 13.2 194 86-281 11-236 (339)
326 1tl2_A L10, protein (tachylect 96.9 0.048 1.6E-06 41.3 13.2 141 24-181 41-203 (236)
327 3pbp_A Nucleoporin NUP82; beta 96.8 0.18 6E-06 42.4 19.0 143 83-227 30-208 (452)
328 3a9g_A Putative uncharacterize 96.7 0.19 6.5E-06 41.5 26.7 197 23-231 28-296 (354)
329 3das_A Putative oxidoreductase 96.5 0.25 8.6E-06 40.5 29.9 226 74-306 32-326 (347)
330 2woz_A Kelch repeat and BTB do 96.4 0.28 9.7E-06 39.5 19.3 190 82-278 54-289 (318)
331 2zwa_A Leucine carboxyl methyl 96.4 0.57 2E-05 42.6 20.3 196 125-320 396-635 (695)
332 1cru_A Protein (soluble quinop 96.3 0.3 1E-05 41.8 16.8 106 23-134 26-162 (454)
333 1cru_A Protein (soluble quinop 96.0 0.63 2.2E-05 39.8 19.4 103 75-177 28-163 (454)
334 1xi4_A Clathrin heavy chain; a 95.8 1.1 3.9E-05 43.7 19.0 198 79-283 71-296 (1630)
335 3ott_A Two-component system se 95.2 1.8 6.3E-05 39.6 28.3 231 73-318 21-258 (758)
336 2xzh_A Clathrin heavy chain 1; 95.0 1.1 3.9E-05 36.2 26.9 234 29-278 72-334 (365)
337 2be1_A Serine/threonine-protei 94.8 0.14 4.6E-06 41.9 8.3 116 170-285 11-139 (339)
338 3s25_A Hypothetical 7-bladed b 94.6 1.4 4.8E-05 35.3 20.5 174 80-276 59-255 (302)
339 3das_A Putative oxidoreductase 94.5 1.7 5.7E-05 35.6 19.7 80 152-231 26-116 (347)
340 2xzh_A Clathrin heavy chain 1; 94.1 1.9 6.7E-05 34.9 30.5 209 78-295 71-309 (365)
341 3sbq_A Nitrous-oxide reductase 93.8 1.4 4.8E-05 38.5 12.7 72 160-231 325-408 (638)
342 1bpo_A Protein (clathrin); cla 93.4 3.2 0.00011 35.2 27.1 210 78-296 70-309 (494)
343 1xi4_A Clathrin heavy chain; a 93.3 6.8 0.00023 38.6 18.3 233 31-279 73-334 (1630)
344 3ott_A Two-component system se 91.4 8.3 0.00029 35.3 35.4 260 23-304 21-295 (758)
345 1suu_A DNA gyrase subunit A; t 90.4 6 0.0002 31.8 27.9 195 33-230 6-230 (312)
346 3s25_A Hypothetical 7-bladed b 90.1 6.2 0.00021 31.6 21.8 139 83-237 23-182 (302)
347 1bpo_A Protein (clathrin); cla 89.9 8.3 0.00028 32.7 30.0 234 29-278 71-333 (494)
348 3ei3_A DNA damage-binding prot 89.9 15 0.00051 35.6 32.1 223 75-306 515-755 (1158)
349 3sbq_A Nitrous-oxide reductase 89.6 1.9 6.6E-05 37.7 8.8 107 27-134 326-453 (638)
350 2wg3_C Hedgehog-interacting pr 88.3 11 0.00039 32.2 14.1 104 75-178 15-159 (463)
351 4gq2_M Nucleoporin NUP120; bet 87.1 8.3 0.00028 36.5 12.4 33 251-283 241-273 (950)
352 1zi0_A DNA gyrase subunit A; b 86.5 11 0.00038 30.1 26.1 195 33-229 1-224 (307)
353 2wg3_C Hedgehog-interacting pr 85.3 17 0.00057 31.1 26.5 110 24-135 14-158 (463)
354 3l6v_A GYRA, DNA gyrase subuni 82.2 20 0.00068 29.6 27.1 153 32-186 4-178 (370)
355 3qhy_B Beta-lactamase inhibito 76.6 25 0.00087 27.6 17.0 142 75-230 25-167 (282)
356 3uc1_A DNA gyrase subunit A; D 76.3 29 0.00099 28.0 21.1 159 26-186 98-277 (327)
357 4gq2_M Nucleoporin NUP120; bet 75.6 47 0.0016 31.4 12.8 37 159-195 237-273 (950)
358 3zwu_A Alkaline phosphatase PH 73.3 18 0.00061 32.0 8.8 58 161-218 479-548 (592)
359 4fhn_B Nucleoporin NUP120; pro 71.5 8.5 0.00029 37.3 7.0 30 254-283 246-275 (1139)
360 4a9v_A PHOX; hydrolase, beta-p 68.6 30 0.001 30.4 9.0 60 160-219 478-549 (592)
361 3no0_A DNA gyrase subunit A; D 66.3 45 0.0015 26.1 19.1 158 24-186 68-244 (276)
362 3qhy_B Beta-lactamase inhibito 66.2 46 0.0016 26.1 17.8 244 25-303 25-269 (282)
363 3f7f_A Nucleoporin NUP120; nuc 65.8 21 0.00073 32.3 7.7 29 256-284 230-258 (729)
364 3q6k_A 43.2 kDa salivary prote 64.9 59 0.002 26.9 20.7 165 138-305 124-341 (381)
365 3b7f_A Glycosyl hydrolase, BNR 62.9 63 0.0021 26.5 25.8 103 75-179 116-254 (394)
366 4fhn_B Nucleoporin NUP120; pro 58.4 7.7 0.00026 37.6 3.9 37 75-111 239-275 (1139)
367 4a9v_A PHOX; hydrolase, beta-p 57.4 86 0.0029 27.7 9.7 61 74-134 476-549 (592)
368 3f7f_A Nucleoporin NUP120; nuc 57.1 20 0.00068 32.5 5.9 35 75-111 223-257 (729)
369 1wp5_A Topoisomerase IV; broke 56.2 77 0.0026 25.5 27.2 192 33-230 3-224 (323)
370 3zwu_A Alkaline phosphatase PH 55.2 74 0.0025 28.2 9.2 59 75-133 477-548 (592)
371 3no0_A DNA gyrase subunit A; D 53.4 79 0.0027 24.7 21.6 154 25-187 25-195 (276)
372 4hvt_A Ritya.17583.B, post-pro 46.8 1.7E+02 0.0058 26.6 23.9 238 75-318 130-428 (711)
373 3uc1_A DNA gyrase subunit A; D 42.4 1.3E+02 0.0045 24.1 24.8 160 25-187 43-227 (327)
374 4hvt_A Ritya.17583.B, post-pro 31.4 3E+02 0.01 25.0 19.9 194 119-319 132-380 (711)
375 3l6v_A GYRA, DNA gyrase subuni 22.6 3.2E+02 0.011 22.4 19.9 68 34-103 112-179 (370)
376 3al9_A Plexin-A2; beta-propell 22.6 2.8E+02 0.0097 24.2 7.5 66 118-183 402-476 (539)
377 1q47_A Semaphorin 3A; beta pro 21.4 3.6E+02 0.012 23.2 7.8 55 129-183 423-487 (495)
No 1
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=9.3e-54 Score=354.19 Aligned_cols=299 Identities=68% Similarity=1.160 Sum_probs=275.7
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
+.+...+.+|.+.|++++|+|+|++|++++.|+.+++|+... ......+.+|...|.+++|+|++++|++++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 84 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--------GKFEKTISGHKLGISDVAWSSDSNLLVSAS 84 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------CCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC--------cccchhhccCCCceEEEEEcCCCCEEEEEC
Confidence 567788999999999999999999999999999999998743 234556788999999999999999999999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
.|+.|++||+.+++++..+.+|...+.+++|+|++++|++++.|+.|++||+++++....+..|..++.+++|+|+++.+
T Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 85 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
++++.|+.|++||+++++....+...+...+..++|+|++++|++++.|+.|++||+++++.+..+.+|.....++...+
T Consensus 165 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 165 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred EEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 99999999999999998887777666677899999999999999999999999999999999999988877665555566
Q ss_pred EecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
..+++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.++|+.|++|+.+
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 6678999999999999999999999999999999999999999999999999988788999999875
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2e-52 Score=358.69 Aligned_cols=290 Identities=31% Similarity=0.602 Sum_probs=263.9
Q ss_pred eeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
...+.+|..+|++++|+|++++|++|+.|+.|++|++... .....+.+|...|.+++|+|++++|++|+.|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~--------~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~ 172 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG--------DFERTLKGHTDSVQDISFDHSGKLLASCSADM 172 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC--------CCCEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC
Confidence 4567899999999999999999999999999999987542 34567889999999999999999999999999
Q ss_pred cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 96 TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
+|++||+.+++++..+.+|...|.+++|+|++++|++++.|+.|++||++++.++..+..|...+.++.++|++..++++
T Consensus 173 ~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~ 252 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252 (410)
T ss_dssp CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC--------------------CCEEEEEecCCeEEEEeCCCCcEE
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN--------------------GKFILVGTLDNTLRLWNYSTGKIL 235 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------g~~l~~~~~d~~i~i~d~~~~~~~ 235 (321)
+.|++|++||++++++...+ ..+...+.+++|+|+ |.+|++++.|+.|++||+++++.+
T Consensus 253 s~D~~v~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred cCCCeEEEEECCCCceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 99999999999988776655 356678999999996 678999999999999999999999
Q ss_pred EEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEE
Q 020798 236 KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKI 315 (321)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~i 315 (321)
..+.+|...+.++ ...+++.+|++|+.||.|++||+.+++.+..+.+|..+|++++|+|++.+|++|+. |+.|++
T Consensus 332 ~~~~~h~~~v~~v---~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~--D~~i~v 406 (410)
T 1vyh_C 332 MTLVGHDNWVRGV---LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV--DQTVKV 406 (410)
T ss_dssp EEEECCSSCEEEE---EECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEET--TSEEEE
T ss_pred EEEECCCCcEEEE---EEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeC--CCcEEE
Confidence 9999988765544 33578999999999999999999999999999999999999999999999999994 589999
Q ss_pred cccc
Q 020798 316 WTQE 319 (321)
Q Consensus 316 w~~~ 319 (321)
|+..
T Consensus 407 W~~r 410 (410)
T 1vyh_C 407 WECR 410 (410)
T ss_dssp EC--
T ss_pred EeCC
Confidence 9863
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.6e-52 Score=343.34 Aligned_cols=292 Identities=23% Similarity=0.396 Sum_probs=261.3
Q ss_pred eeeeccCCcccEEEEEECCC----CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE
Q 020798 15 LTQTLNGHLRAISSVKFSHD----GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~----g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~ 90 (321)
+.+.+++|.+.|++++|+|+ +++|++|+.|+.+++|++.... ......+.+|...|.+++|+++++++++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~------~~~~~~l~gh~~~v~~~~~~~~~~~l~s 97 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER------LDLQWSLEGHQLGVVSVDISHTLPIAAS 97 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE------EEEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC------eeeeeeeccCCCCEEEEEECCCCCEEEE
Confidence 44678899999999999985 6799999999999999875321 1223457899999999999999999999
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
++.|+.|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++....+..|...+.+++|+|+++
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 177 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSS
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCC
Confidence 99999999999999998888888998999999999999999999999999999999988888888999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEe
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISS 250 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 250 (321)
+|++++.|+.|++||+++++.+..+ ..+..++..++|+|++++|++++.|+.|++||+++++.+..+.+|...+.++.
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~- 255 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA- 255 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEE-CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEE-
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEE-cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEE-
Confidence 9999999999999999998877665 34566789999999999999999999999999999999999998887655443
Q ss_pred EEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
..+++.+|++++.|+.|++||+.+++++..+.+|..+|.+++|+|++++|++++ .|+.|++||.
T Consensus 256 --~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~--~d~~i~vwd~ 319 (321)
T 3ow8_A 256 --FCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG--DDQEIHIYDC 319 (321)
T ss_dssp --ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTCCEEEEEC
T ss_pred --ECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe--CCCeEEEEeC
Confidence 347899999999999999999999999999999999999999999999999998 4589999985
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.3e-51 Score=342.11 Aligned_cols=292 Identities=24% Similarity=0.457 Sum_probs=257.1
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
....+.+.+|.+.|++++|+|++++|++|+.|+.|++|+... ...+..+..|...|.+++|+|++++|++|+
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 116 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT--------TNKVHAIPLRSSWVMTCAYAPSGNYVACGG 116 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT--------CCEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC--------CCcceEeecCCccEEEEEECCCCCEEEEEe
Confidence 345678999999999999999999999999999999998753 234566778999999999999999999999
Q ss_pred CCCcEEEEecCCc----ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 93 DDKTIRLWDVPTA----TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 93 ~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
.|+.+++|++.+. .....+.+|...+.++.|++++ .+++++.|+.|++||+++++....+..|...|.+++|+|+
T Consensus 117 ~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp TTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC
Confidence 9999999999765 3455678999999999999876 5889999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEE
Q 020798 169 GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248 (321)
Q Consensus 169 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 248 (321)
++++++++.|+.|++||++++.+...+ ..+...+..++|+|++++|++++.|+.|++||+++++.+..+..+. ....+
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-~~~~v 273 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVREGMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN-IICGI 273 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-CCSCE
T ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEE-cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC-cccce
Confidence 999999999999999999988776665 3566789999999999999999999999999999988877765322 22224
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
......+++++|++|+.||.|++||+.+++.+..+.+|..+|.+++|+|++.+||+|+. |+.|+|||
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~--D~~i~iWd 340 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSW--DSFLKIWN 340 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEET--TSCEEEEC
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcC--CccEEecC
Confidence 44445689999999999999999999999999999999999999999999999999995 58999997
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.8e-51 Score=337.94 Aligned_cols=294 Identities=20% Similarity=0.363 Sum_probs=258.8
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
.++.+++.+|.+.|++++|+|+|++|++++.|+.+++|++.. ...+..+..|...|.+++|+|++++|++|+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET--------QVEVRSIQVTETPVRAGKFIARKNWIIVGS 74 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--------TEEEEEEECCSSCEEEEEEEGGGTEEEEEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC--------CceeEEeeccCCcEEEEEEeCCCCEEEEEC
Confidence 356778899999999999999999999999999999998753 234567788999999999999999999999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEcc-CCC
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNR-DGT 170 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~ 170 (321)
.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||++++ .....+..|...|.+++|+| ++.
T Consensus 75 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 9999999999999999999999999999999999999999999999999999877 55667889999999999999 578
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc--CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEE
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP--NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCI 248 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 248 (321)
.|++++.|++|++||++.......+...+...+..+.++| ++++|++++.|+.|++||+++++.+..+.+|...+..+
T Consensus 155 ~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~ 234 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFA 234 (304)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred EEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEE
Confidence 9999999999999999877666666555666788888886 77899999999999999999999999999998765443
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCc--eEEEEeecCCccEEEccccc
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN--IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~--~l~s~~~d~~~~i~iw~~~~ 320 (321)
...+++.+|++|+.||.|++||+.+++++..+..|...+.+++|+|++. ++|+|+. ..+.+|+..+
T Consensus 235 ---~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~---~g~~~~~~~~ 302 (304)
T 2ynn_A 235 ---VFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD---NGFTVLSLGN 302 (304)
T ss_dssp ---EECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEET---TEEEEEECC-
T ss_pred ---EECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecC---CceEEEEecc
Confidence 3457899999999999999999999999999999999999999999875 5777762 3466777654
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.2e-50 Score=335.96 Aligned_cols=292 Identities=22% Similarity=0.410 Sum_probs=255.2
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
...+.+++|...|++++|+|++++|++|+.|+.+++|+... ......+..|...|.+++|+|++++|++|+.
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~--------~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~ 126 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT--------TNKEHAVTMPCTWVMACAYAPSGCAIACGGL 126 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--------CCEEEEEECSSSCCCEEEECTTSSEEEEEST
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC--------CCcceEEecCCCCEEEEEECCCCCEEEEeeC
Confidence 45678899999999999999999999999999999998643 2234556678889999999999999999999
Q ss_pred CCcEEEEecCCc------ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc
Q 020798 94 DKTIRLWDVPTA------TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167 (321)
Q Consensus 94 d~~i~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~ 167 (321)
|+.+++|++... .....+.+|...+.+++|+|++..|++++.|++|++||+++++.+..+..|...|.+++|+|
T Consensus 127 d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 127 DNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp TSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred CCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence 999999998643 23456678999999999999999999999999999999999999999999999999999988
Q ss_pred --CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 168 --DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 168 --~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
+++.|++++.|+.|++||++++++...+ ..+...+..++|+|++++|++++.|+.|++||++.++.+..+..+.. .
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~-~ 284 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI-I 284 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC-C
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc-c
Confidence 4679999999999999999998877665 45667899999999999999999999999999999887777754332 1
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
..+......+++.+|++|+.|+.|++||+.+++.+..+.+|.++|.+++|+|++++|++|+. |+.|+||+
T Consensus 285 ~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~--D~~v~vW~ 354 (354)
T 2pbi_B 285 FGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSW--DHTLRVWA 354 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEET--TSEEEEEC
T ss_pred cceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcC--CCCEEecC
Confidence 22333444578999999999999999999999999999999999999999999999999994 58999996
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-49 Score=335.34 Aligned_cols=292 Identities=21% Similarity=0.290 Sum_probs=235.9
Q ss_pred ccCCcccEEEEEECCCCCEEEEecC------CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSA------DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~------d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
...|.+.|++++|||||++||+|+. |+.+++|+..... ..........+|...|.+++|+|+++ +++++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~----~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s 112 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA----PNESLCTAGVQTEAGVTDVAWVSEKG-ILVAS 112 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC-------CGGGCSEEEECSSCEEEEEEETTTE-EEEEE
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC----cceeEecccCCCCCCEEEEEEcCCCC-EEEEE
Confidence 3579999999999999999999997 6778888654321 11122234457889999999999986 55678
Q ss_pred CCCcEEEEecCCcceee----eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 93 DDKTIRLWDVPTATCLK----TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
.||+|++||+.+++... ...+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|+
T Consensus 113 ~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 113 DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 89999999998876432 34579999999999999999999999999999999999999999999999999999998
Q ss_pred CC-EEEEEeCCCeEEEEeCCCCceeeeec-cCCCCCeEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 169 GT-MIVTSSYDGLCRIWDASTGHCMKTLI-DDENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 169 ~~-~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
+. .+++++.|+.|++||+++++....+. ..+...+..++|+|+ +.+|++++.|+.|++||+++++.+..+.+|...+
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v 272 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI 272 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCE
T ss_pred CCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeE
Confidence 75 78899999999999999887655442 234556889999997 5688899999999999999999999998888776
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecC-CCceEEEEeecCCccEEEccccc
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP-TENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.++. |.+.++++|++|+.||+|+|||+++++++..+ +|.++|++++|+| ++.+||+||. |+.|++|++..
T Consensus 273 ~~l~--~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~--Dg~v~iW~~~~ 343 (357)
T 4g56_B 273 TGLA--YSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGW--DHKVLHHHLPS 343 (357)
T ss_dssp EEEE--ECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEET--TSCEEEEECC-
T ss_pred EEEE--EcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcC--CCeEEEEECCC
Confidence 5543 33333478999999999999999998877654 7999999999999 7899999995 58999999854
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-48 Score=323.22 Aligned_cols=295 Identities=27% Similarity=0.476 Sum_probs=252.5
Q ss_pred ceeeeeccCCcccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
..+...|.+|.+.|++++|+|++ ++|++|+.|+.+++|++..... ....++..+.+|...|.+++|+|++++|++|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 45678899999999999999965 8999999999999999864321 1123456788999999999999999999999
Q ss_pred eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC---
Q 020798 92 SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD--- 168 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~--- 168 (321)
+.|++|++||+.+++....+.+|...|.+++|+|++.+|++++.|+.|++||++ ++++..+..|...+.+++|.|.
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC---
T ss_pred eCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCC
Confidence 999999999999999999999999999999999999999999999999999997 4566778889999999999985
Q ss_pred ---CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 169 ---GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 169 ---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
+..+++++.|+.|++||+++.+....+ ..+...+..++|+|+|++|++++.|+.|++||+.+++.+..+..+. ..
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~v 240 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIEADF-IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD-EV 240 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS-CE
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhheee-cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-cE
Confidence 448999999999999999987766554 3567789999999999999999999999999999999888887543 33
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC--------CCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG--------HTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
....+.+++.+|++++.+ .+++|++..+..+..+.. |...+.+++|+|+|++|++|+ .|+.|+||+
T Consensus 241 ---~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~--~Dg~i~vWd 314 (319)
T 3frx_A 241 ---FSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY--TDNVIRVWQ 314 (319)
T ss_dssp ---EEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE--TTSCEEEEE
T ss_pred ---EEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEee--cCceEEEEE
Confidence 333445789988887755 599999988777665542 456799999999999999998 458999999
Q ss_pred cc
Q 020798 318 QE 319 (321)
Q Consensus 318 ~~ 319 (321)
+.
T Consensus 315 ~~ 316 (319)
T 3frx_A 315 VM 316 (319)
T ss_dssp EE
T ss_pred Ee
Confidence 85
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-49 Score=329.76 Aligned_cols=299 Identities=23% Similarity=0.397 Sum_probs=244.4
Q ss_pred cceeeeeccCCcc-cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE
Q 020798 12 PYTLTQTLNGHLR-AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 12 ~~~~~~~~~~h~~-~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~ 90 (321)
...+.+.+.+|.. .|.+++|+|+|++||+|+.|+.|++|++..... ........+|...|.+++|+|++++|++
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-----~~~~~~~~~h~~~v~~~~~sp~g~~l~s 78 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-----ICKSVLSEGHQRTVRKVAWSPCGNYLAS 78 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEE-----EEEEEECSSCSSCEEEEEECTTSSEEEE
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-----eeeeeeccccCCcEEEEEECCCCCEEEE
Confidence 4567788999988 999999999999999999999999998753210 0011223689999999999999999999
Q ss_pred EeCCCcEEEEecCCc--ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC---EEEEEEeCCCCCeeEEEE
Q 020798 91 ASDDKTIRLWDVPTA--TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG---KCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~v~~~~~ 165 (321)
|+.|+.+++|++... ++...+.+|...|.+++|+|++++|++++.|+.|++||++++ +++..+..|...|.+++|
T Consensus 79 ~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred EECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 999999999998766 456778899999999999999999999999999999999765 345667889999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCcee-eeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC------------
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCM-KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG------------ 232 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~------------ 232 (321)
+|++.+|++++.|+.|++||.+.+... ......+...|..++|+|+|++|++++.|+.|++||....
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~ 238 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccC
Confidence 999999999999999999998876532 2233456778999999999999999999999999996321
Q ss_pred ---cEEEEEec-cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce---------EEEEecCCCCCeEEEEecCCC
Q 020798 233 ---KILKTYTG-HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK---------VVQKLEGHTDPVISVASHPTE 299 (321)
Q Consensus 233 ---~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~---------~~~~~~~h~~~v~~~~~~p~~ 299 (321)
+.+..+.+ |...++.+ ...+++..|++++.|+.|++|+..... ......+|...|++++|+|++
T Consensus 239 ~~~~~~~~~~~~h~~~v~~v---~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 239 PSWKCICTLSGFHSRTIYDI---AWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp CEEEEEEEECSSCSSCEEEE---EECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS
T ss_pred CccceeEEecCCCCCcEEEE---EEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC
Confidence 22334443 44444333 334778899999999999999986542 123346899999999999998
Q ss_pred -ceEEEEeecCCccEEEccccc
Q 020798 300 -NIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 300 -~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.+||+||. ||.|++|+.+.
T Consensus 316 ~~~laS~s~--Dg~v~~W~~~~ 335 (345)
T 3fm0_A 316 PGLLASCSD--DGEVAFWKYQR 335 (345)
T ss_dssp TTEEEEEET--TSCEEEEEECC
T ss_pred ceEEEEcCC--CCcEEEEEecC
Confidence 58999984 58999999864
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.2e-50 Score=340.02 Aligned_cols=296 Identities=21% Similarity=0.440 Sum_probs=251.8
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
...+.|.+|.+.|++++|+|++++|++|+.|+.|++|+... ......+..|...|.+++|+|++++|++|+.
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~--------~~~~~~~~~h~~~v~~~~~s~~g~~las~~~ 128 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT--------SQKTHAIKLHCPWVMECAFAPNGQSVACGGL 128 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT--------TEEEEEEECCCTTCCCCEECTTSSEEEECCS
T ss_pred EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------CccceEEecCCCCEEEEEECCCCCEEEEeeC
Confidence 35678999999999999999999999999999999998743 2345677889999999999999999999999
Q ss_pred CCcEEEEecCCcc-------eeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEE-----eCCCCCe
Q 020798 94 DKTIRLWDVPTAT-------CLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVL-----PAHSDPV 160 (321)
Q Consensus 94 d~~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~-----~~~~~~v 160 (321)
|+.+++||+.+.. ....+.+|...+.++.|.|++ ..|++|+.|++|++||+++++.+..+ ..|...+
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence 9999999986532 234567899999999999974 57999999999999999999887766 5688899
Q ss_pred eEEEEcc-CCCEEEEEeCCCeEEEEeCCCC-ceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 161 TAVDFNR-DGTMIVTSSYDGLCRIWDASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 161 ~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
.+++|++ +++++++++.|++|++||++.. ..... ...+...|..++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT-YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE-ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE-ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 9999987 7889999999999999999844 43433 4456778999999999999999999999999999999988887
Q ss_pred eccCCc----eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe----cCCCCCeEEEEecCCCceEEEEeecCC
Q 020798 239 TGHTNS----KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL----EGHTDPVISVASHPTENIIASGALDND 310 (321)
Q Consensus 239 ~~~~~~----~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~p~~~~l~s~~~d~~ 310 (321)
..+... ...+....+.++|++|++|+.||.|++||+..++.+..+ .+|.++|.+++|+|++.+|++||. |
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~--D 365 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW--D 365 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT--T
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC--C
Confidence 654321 111223344578999999999999999999988887766 679999999999999999999995 5
Q ss_pred ccEEEccccc
Q 020798 311 RTVKIWTQEK 320 (321)
Q Consensus 311 ~~i~iw~~~~ 320 (321)
+.|+||+++.
T Consensus 366 ~~i~iW~~~~ 375 (380)
T 3iz6_a 366 KNLKIWAFSG 375 (380)
T ss_dssp SCEEEEECCS
T ss_pred CCEEEEecCC
Confidence 8999999864
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3e-48 Score=324.54 Aligned_cols=293 Identities=18% Similarity=0.251 Sum_probs=236.5
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccC--CCC-CCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSIS--NSD-STPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~--~~~-~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
..|.+.|.+++|+|||++|++++ |+++++|+..... ... ............|..+|.+++|+|++ .|++|+.||.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 45778899999999999999887 6677777532110 000 01111112223467789999999985 6789999999
Q ss_pred EEEEecCCcceeee----eecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC-E
Q 020798 97 IRLWDVPTATCLKT----LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT-M 171 (321)
Q Consensus 97 i~iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 171 (321)
|++||+.+++.... ..+|...|.+++|+|++++|++|+.|++|++||+++++++..+..|...|.+++|+|++. +
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 99999998865433 458999999999999999999999999999999999999999999999999999999875 7
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeecc-CCCCCeEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 172 IVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
|++++.|++|++||+++++....+.. .+...+..++|+|+ ++++++|+.|+.|++||+++++.+..+.+|...+.++.
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~ 264 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLV 264 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 89999999999999999887766532 33456888999985 67888999999999999999999999999988765543
Q ss_pred eEEEecCC-eEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCc-eEEEEeecCCccEEEccccc
Q 020798 250 STFSVTNG-KYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN-IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 250 ~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~~~d~~~~i~iw~~~~ 320 (321)
| .+++ .+|++|+.|++|+|||+.+++++ .+.+|.+.|++++|+|++. +|++||. |++|++|++..
T Consensus 265 --f-sp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~--D~~v~~w~v~~ 331 (344)
T 4gqb_B 265 --F-SPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGW--DHQVVHHVVPT 331 (344)
T ss_dssp --E-CSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEET--TSCEEEEECCC
T ss_pred --E-ccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcC--CCeEEEEECCC
Confidence 3 3565 68999999999999999988765 5789999999999999986 5678884 58999999864
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-47 Score=323.92 Aligned_cols=293 Identities=33% Similarity=0.603 Sum_probs=241.3
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCC------C--CCCc--ccccccccccEEEEEECCCCCEEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDS------T--PPSP--LQKFTGHEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~------~--~~~~--~~~~~~h~~~i~~~~~~~~~~~l~~ 90 (321)
+|...|.+++|+|+|++||+|+ ++.+++|++........ . .... ......+...|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999987 78999998754221000 0 0000 0001123345999999999999999
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc-CC
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-DG 169 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~ 169 (321)
|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||++++++...+. +...+.+++|+| ++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDG 219 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCC
Confidence 9999999999999999888899999999999999999999999999999999999998877765 556799999999 88
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeec------cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC-----------
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLI------DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG----------- 232 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~----------- 232 (321)
.++++++.|+.|++||+++++....+. ..+...+..++|+|+|++|++++.|+.|++||+++.
T Consensus 220 ~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~ 299 (393)
T 1erj_A 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS 299 (393)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------------
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCC
Confidence 999999999999999999887665542 345667999999999999999999999999998753
Q ss_pred -cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecC------CCceEEEE
Q 020798 233 -KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP------TENIIASG 305 (321)
Q Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p------~~~~l~s~ 305 (321)
.....+.+|...+.++ ...+++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++++||+|
T Consensus 300 ~~~~~~~~~h~~~v~~~---~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sg 376 (393)
T 1erj_A 300 GTCEVTYIGHKDFVLSV---ATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATG 376 (393)
T ss_dssp -CEEEEEECCSSCEEEE---EECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEE
T ss_pred CcceEEEecccCcEEEE---EECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEE
Confidence 2345566676654433 3457899999999999999999999999999999999999999876 68899999
Q ss_pred eecCCccEEEccccc
Q 020798 306 ALDNDRTVKIWTQEK 320 (321)
Q Consensus 306 ~~d~~~~i~iw~~~~ 320 (321)
+ .|+.|+||+.++
T Consensus 377 s--~Dg~i~iW~~~~ 389 (393)
T 1erj_A 377 S--GDCKARIWKYKK 389 (393)
T ss_dssp E--TTSEEEEEEEEE
T ss_pred C--CCCcEEECcccc
Confidence 9 458999999864
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-47 Score=318.35 Aligned_cols=294 Identities=23% Similarity=0.376 Sum_probs=231.1
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccc-cc-ccccEEEEEECCCCCEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKF-TG-HEQGVSDLVFSSDSRFLV 89 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~i~~~~~~~~~~~l~ 89 (321)
..++.+.+++|.+.|.+++|+|+ +|++|+.|+.|++|++.... ......+ .+ |...|.+++|+|++++|+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~------~~~~~~~~~~~h~~~v~~v~~sp~~~~la 74 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDD------FTLIDVLDETAHKKAIRSVAWRPHTSLLA 74 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSC------CEEEEEECTTCCCSCEEEEEECTTSSEEE
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCC------eEEEEEEecCCccCCEEEEEECCCCCEEE
Confidence 45667889999999999999988 99999999999999875311 1122333 33 999999999999999999
Q ss_pred EEeCCCcEEEEecCC-------cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC----CEEEEEEeCCCC
Q 020798 90 SASDDKTIRLWDVPT-------ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT----GKCLKVLPAHSD 158 (321)
Q Consensus 90 ~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~----~~~~~~~~~~~~ 158 (321)
+|+.|+.|++||+.. .+....+.+|...|.+++|+|++++|++|+.|+.|++||++. .+++..+..|..
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 999999999999853 345567789999999999999999999999999999999943 256677889999
Q ss_pred CeeEEEEccCCCEEEEEeCCCeEEEEeCCCC--ceeeeeccCCCCCeEEEEEccC--CCEEEEEecCCeEEEEeCCCC--
Q 020798 159 PVTAVDFNRDGTMIVTSSYDGLCRIWDASTG--HCMKTLIDDENPPVSFVKFSPN--GKFILVGTLDNTLRLWNYSTG-- 232 (321)
Q Consensus 159 ~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~--g~~l~~~~~d~~i~i~d~~~~-- 232 (321)
.|.+++|+|++.+|++++.|++|++||...+ +++.. +..+...|..++|+|+ +.+|++++.|+.|++||+..+
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 233 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAV-LNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEE-ECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEE-ccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence 9999999999999999999999999998765 33433 3456778999999998 778999999999999998654
Q ss_pred ------cEEEEEec-cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce--EEE-EecCCCC-CeEEEEecC--CC
Q 020798 233 ------KILKTYTG-HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK--VVQ-KLEGHTD-PVISVASHP--TE 299 (321)
Q Consensus 233 ------~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~-~~~~h~~-~v~~~~~~p--~~ 299 (321)
.....+.. |...+.++. +. + +.+|++++.||.|++||..+++ .+. ...+|.. .|.+++|+| ++
T Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~v~--~s-~-~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~ 309 (330)
T 2hes_X 234 DDQQEWVCEAILPDVHKRQVYNVA--WG-F-NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGK 309 (330)
T ss_dssp TSCEEEEEEEECCSCCSSCEEEEE--EC-T-TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----
T ss_pred cccceeEEeeecccccccceEEEE--Ec-C-CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCc
Confidence 23334443 555554443 32 3 4489999999999999998763 333 3467877 899999999 68
Q ss_pred ceEEEEeecCCccEEEccccc
Q 020798 300 NIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 300 ~~l~s~~~d~~~~i~iw~~~~ 320 (321)
++||+|+. |+.|+||+.++
T Consensus 310 ~~las~s~--Dg~v~~W~~~~ 328 (330)
T 2hes_X 310 TILATGGD--DGIVNFWSLEK 328 (330)
T ss_dssp CCEEEEET--TSEEEEEEC--
T ss_pred eEEEEecC--CCcEEEEEecc
Confidence 99999994 58999999874
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.3e-47 Score=318.28 Aligned_cols=298 Identities=25% Similarity=0.423 Sum_probs=239.7
Q ss_pred ceeeeeccCCcccEEEEEE-----CC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC
Q 020798 13 YTLTQTLNGHLRAISSVKF-----SH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR 86 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~-----s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~ 86 (321)
..+...|++|.+.|++++| +| ++++|++|+.|+.|++|++...... .....+...+.+|...|.+++|+|+++
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~-~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQN-GYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCS-SBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcc-cccccccchhccCCCceEEEEECCCCC
Confidence 4566789999999999999 76 9999999999999999998643211 011234556789999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE--eCCCCCeeEEE
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL--PAHSDPVTAVD 164 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~~~v~~~~ 164 (321)
++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+......... ..|...+.+++
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeee
Confidence 9999999999999999999999999999999999999999999999999999999999854332221 26788999999
Q ss_pred EccCC----------CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC-Cc
Q 020798 165 FNRDG----------TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST-GK 233 (321)
Q Consensus 165 ~~~~~----------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~-~~ 233 (321)
|+|++ .++++++.|+.|++||.. .+.... ...+...+..++|+|+|++|++++.|+.|++||+.. ..
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~-~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYT-FKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEE-EECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEE-EcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 99986 689999999999999954 333333 345667899999999999999999999999999943 33
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE--Eec-----------CCCCCeEEEEecCCCc
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ--KLE-----------GHTDPVISVASHPTEN 300 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~-----------~h~~~v~~~~~~p~~~ 300 (321)
....+. +...+ ....+.+++.+++++ .|+.|++||+.+++... .+. +|...|.+++|+|+++
T Consensus 248 ~~~~~~-~~~~v---~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 322 (343)
T 2xzm_R 248 PQREFD-AGSTI---NQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK 322 (343)
T ss_dssp CSEEEE-CSSCE---EEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC
T ss_pred cceeec-CCCcE---EEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC
Confidence 444442 22233 333345778877654 68889999998765432 333 6888999999999999
Q ss_pred eEEEEeecCCccEEEccccc
Q 020798 301 IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~~ 320 (321)
+|++|+ .||.|++|+.+.
T Consensus 323 ~l~sg~--~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 323 KLFAGF--TDGVIRTFSFET 340 (343)
T ss_dssp CEEEEE--TTSEEEEEEEEE
T ss_pred eEEEec--CCceEEEEEEEc
Confidence 999998 458999999863
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.8e-47 Score=341.74 Aligned_cols=295 Identities=21% Similarity=0.294 Sum_probs=252.8
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
....+.+.+|...|++++|+|+|++||+|+.|+.|++||+.... ......+.+|.+.|.+++|+|++++|++++
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~------~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~ 122 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT------HILKTTIPVFSGPVKDISWDSESKRIAAVG 122 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT------CCEEEEEECSSSCEEEEEECTTSCEEEEEE
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc------ceeeEeecccCCceEEEEECCCCCEEEEEE
Confidence 34566788999999999999999999999999999999975321 123346778999999999999999999888
Q ss_pred CC----CcEEEEecCCcceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc
Q 020798 93 DD----KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR 167 (321)
Q Consensus 93 ~d----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~ 167 (321)
.+ +.|++|| .++....+.+|...|.+++|+|++. .|++++.|++|++||..++++...+..|...|.+++|+|
T Consensus 123 ~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp 200 (611)
T 1nr0_A 123 EGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 200 (611)
T ss_dssp CCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECT
T ss_pred CCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECC
Confidence 65 3677777 4555667889999999999999986 599999999999999999998889999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeecc------CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 168 DGTMIVTSSYDGLCRIWDASTGHCMKTLID------DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 168 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
++++|++++.|++|++||+.+++....+.. .+...|..++|+|+|++|++++.|++|++||+.+++.+..+..+
T Consensus 201 dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 201 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 999999999999999999998877665532 56678999999999999999999999999999999988887643
Q ss_pred CCc-eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 242 TNS-KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
... .......+ ++..+++++.||.+++||...++....+.+|..+|++++|+|++++|++|+. |++|++||.+.
T Consensus 281 ~~~~~~~~~~~~---~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~--D~~v~~Wd~~~ 355 (611)
T 1nr0_A 281 TRIEDQQLGIIW---TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA--EGHINSWDIST 355 (611)
T ss_dssp SSGGGCEEEEEE---CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTT
T ss_pred CCccceeEEEEE---cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC--CCcEEEEECCC
Confidence 221 11222222 5788999999999999999998888889999999999999999999999984 58999999753
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.2e-47 Score=340.37 Aligned_cols=299 Identities=25% Similarity=0.375 Sum_probs=245.6
Q ss_pred ccCCcceeeeeccCCcccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC
Q 020798 8 ESFRPYTLTQTLNGHLRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR 86 (321)
Q Consensus 8 ~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~ 86 (321)
..++..+....+.+|.+.|++++|+|++. +|++|+.|+.+++|+... ...+..+.+|...|.+++|+|+++
T Consensus 132 ~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~--------~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 132 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP--------FKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp EETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT--------BEEEEEECCCSSCEEEEEECTTSS
T ss_pred EEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC--------CeEeeeeccccCceEEEEECCCCC
Confidence 33444445567889999999999999997 599999999999998542 234567789999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCcceeeeee-------cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE-------
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKTLI-------GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV------- 152 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~------- 152 (321)
+|++++.|+.|++||+.+++....+. +|...|.+++|+|++++|++++.|++|++||++++++...
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 99999999999999999988777663 7999999999999999999999999999999988765433
Q ss_pred ------------------------------------EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec
Q 020798 153 ------------------------------------LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI 196 (321)
Q Consensus 153 ------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 196 (321)
+..|...|++++|+|+++.|++++.|++|++||+.+++......
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~ 363 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP 363 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSS
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecc
Confidence 34688899999999999999999999999999987654322110
Q ss_pred c-------------------------------------------------------------------------------
Q 020798 197 D------------------------------------------------------------------------------- 197 (321)
Q Consensus 197 ~------------------------------------------------------------------------------- 197 (321)
.
T Consensus 364 ~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~ 443 (611)
T 1nr0_A 364 DVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 443 (611)
T ss_dssp CSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEE
T ss_pred cCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCcee
Confidence 0
Q ss_pred --CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE--EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEE
Q 020798 198 --DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 198 --~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd 273 (321)
.+...+.+++|+|+|++|++++.|+.|++||+.++.. +.. .+|...+.+ ..+.|++++|++++.|+.|++||
T Consensus 444 ~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~---v~fspdg~~las~s~d~~v~~w~ 519 (611)
T 1nr0_A 444 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITS---VAFSNNGAFLVATDQSRKVIPYS 519 (611)
T ss_dssp EEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEE---EEECTTSSEEEEEETTSCEEEEE
T ss_pred eeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEE---EEECCCCCEEEEEcCCCCEEEEE
Confidence 0112356789999999999999999999999987653 233 456655444 34458999999999999999999
Q ss_pred ccc-ceEEEE--ecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 274 LQS-RKVVQK--LEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 274 ~~~-~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+.+ ++++.. +.+|...|++++|+|++++||+|+. |++|+||+++.
T Consensus 520 ~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~--D~~v~lW~~~~ 567 (611)
T 1nr0_A 520 VANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSL--DNSVIVWNMNK 567 (611)
T ss_dssp GGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTC
T ss_pred cCCCCceeeeeeeeecccceeEEEECCCCCEEEEEEC--CCcEEEEECCC
Confidence 987 555443 3459999999999999999999995 58999999864
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.1e-45 Score=307.27 Aligned_cols=296 Identities=28% Similarity=0.466 Sum_probs=249.4
Q ss_pred eeeeeccCCcccEEEEEECCC-CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 14 TLTQTLNGHLRAISSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
++..+|+||.+.|++++|+|+ +++|+||+.|+.|++|++..... ....+...+.+|...|.+++|+|++++|++++
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~---~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET---NYGIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS---CSEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc---ccceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 466789999999999999997 68999999999999999865321 12234567789999999999999999999999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEE-EEEeCCCCCeeEEEEccCC--
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL-KVLPAHSDPVTAVDFNRDG-- 169 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~v~~~~~~~~~-- 169 (321)
.|+.|++|+............+...+....++++++.|++++.|+.+++||+...... .....|...+..++|++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 9999999999998887777888888999999999999999999999999998766543 3456788899999998865
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
..+++++.|+.|++||+++++....+. .+...|.+++|+|++++|++++.|+.|++||+++.+.+..+..+. . +.
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~---v~ 260 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-I---IN 260 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-C---EE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-e---EE
Confidence 478899999999999999988766653 466789999999999999999999999999999999988887653 2 33
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe---------cCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL---------EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---------~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.....+++. +++++.|+.|++||++++..+..+ .+|...|++++|+|++++|++|+. ||.|+||+++.
T Consensus 261 ~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~--Dg~v~iW~~~t 337 (340)
T 4aow_A 261 ALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT--DNLVRVWQVTI 337 (340)
T ss_dssp EEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEET--TSCEEEEEEEC
T ss_pred eeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeC--CCEEEEEeCCC
Confidence 333445555 556678999999999887766554 368889999999999999999984 58999999874
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-46 Score=308.88 Aligned_cols=253 Identities=22% Similarity=0.402 Sum_probs=224.5
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
....+.+|.+.|.+++|+|++++|++++.||.|++||+.++..+..+..|...+.+++|+|++++|++|+.|+.|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 45678899999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCe
Q 020798 145 KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNT 223 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~ 223 (321)
++++.+..+..|...|.+++|+|++.++++++.|++|++||++++.........+...+.+++|+| ++..|++++.|+.
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 999999999999999999999999999999999999999999887655555667778899999999 6789999999999
Q ss_pred EEEEeCCCCcEEEEEec-cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceE
Q 020798 224 LRLWNYSTGKILKTYTG-HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENII 302 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 302 (321)
|++||++++.....+.. +......+... ..+++.+|++|+.|+.|++||+++++++..+.+|...|.+++|+|++.+|
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 243 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYY-PLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII 243 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEEC-CSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEE-EcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEE
Confidence 99999988766555543 33333333221 22478899999999999999999999999999999999999999999999
Q ss_pred EEEeecCCccEEEccccc
Q 020798 303 ASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 303 ~s~~~d~~~~i~iw~~~~ 320 (321)
++|+. |+.|++||.+.
T Consensus 244 ~s~s~--Dg~i~iWd~~~ 259 (304)
T 2ynn_A 244 ISGSE--DGTLKIWNSST 259 (304)
T ss_dssp EEEET--TSCEEEEETTT
T ss_pred EEEcC--CCeEEEEECCC
Confidence 99994 58999999863
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.5e-45 Score=326.48 Aligned_cols=285 Identities=38% Similarity=0.626 Sum_probs=251.8
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
.+..+.+.+|...|.+++|+|++++|++++.|+.+++|++.. ..+..+.+|...|.+++|+|++++|++++
T Consensus 293 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~---------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 363 (577)
T 2ymu_A 293 GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---------QHLQTLTGHSSSVWGVAFSPDGQTIASAS 363 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---------CEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC---------CeeEEEeCCCCCEEEEEECCCCCEEEEEe
Confidence 345667889999999999999999999999999999998642 23456778999999999999999999999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
.|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|++++|+|+++.+
T Consensus 364 ~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 364 DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp TTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 9999999995 55667888899999999999999999999999999999995 567778888999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
++++.|+.+++||.. ++.+..+ ..+...+..++|+|++++|++++.|+.|++||. +++.+..+.+|...+.++ .
T Consensus 442 ~~~~~d~~v~~w~~~-~~~~~~~-~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l---~ 515 (577)
T 2ymu_A 442 ASASDDKTVKLWNRN-GQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV---A 515 (577)
T ss_dssp EEEETTSEEEEEETT-SCEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEE---E
T ss_pred EEEcCCCEEEEEECC-CCEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEE---E
Confidence 999999999999975 4444444 356678999999999999999999999999994 678889999988775554 3
Q ss_pred EecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
..+++++|++++.||.|++||. +++.+..+.+|.++|++++|+||+++|++++. |+.|++||
T Consensus 516 ~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~--D~~i~~Wd 577 (577)
T 2ymu_A 516 FSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASS--DKTVKLWN 577 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET--TSCEEEEC
T ss_pred EcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC--CCEEEEeC
Confidence 3579999999999999999996 67888899999999999999999999999984 58999997
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-44 Score=304.82 Aligned_cols=293 Identities=22% Similarity=0.363 Sum_probs=252.9
Q ss_pred cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 12 PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 12 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
.......+.+|.+.|++++|+|+|++|++++.|+.|++|++.. ...+..+.+|...|.+++|+|++++|+++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 92 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN--------GERLGTLDGHTGTIWSIDVDCFTKYCVTG 92 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT--------CCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--------chhhhhhhhcCCcEEEEEEcCCCCEEEEE
Confidence 3445567899999999999999999999999999999998753 24566788899999999999999999999
Q ss_pred eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC-----CcEEEEecCCCE-----------EEEEEeC
Q 020798 92 SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIWDVKTGK-----------CLKVLPA 155 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~-----------~~~~~~~ 155 (321)
+.|+.|++||+.+++....+. +...+.+++|+|+++.+++++.+ +.|++||+..+. ....+..
T Consensus 93 ~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 171 (369)
T 3zwl_B 93 SADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT 171 (369)
T ss_dssp ETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC
T ss_pred eCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccC
Confidence 999999999999998877776 88899999999999999999998 999999986542 2234445
Q ss_pred CCC--CeeEEEEccCCCEEEEEeCCCeEEEEeCCC-CceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCC
Q 020798 156 HSD--PVTAVDFNRDGTMIVTSSYDGLCRIWDAST-GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 156 ~~~--~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~ 232 (321)
|.. .+.+++|+|+++.+++++.||.|++||+++ ......+ ..+...+..++|+|++++|++++.|+.|++||++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 172 HEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp CTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE-ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 555 899999999999999999999999999998 4444443 455678999999999999999999999999999999
Q ss_pred cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC--------------eEEEEEcccceEEEEecCCCCCeEEEEecCC
Q 020798 233 KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS--------------CVYLWELQSRKVVQKLEGHTDPVISVASHPT 298 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--------------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~ 298 (321)
+.+..+.. .... ......++++++++++.++ .+++||+.+++.+..+.+|..+|.+++|+|+
T Consensus 251 ~~~~~~~~-~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~ 326 (369)
T 3zwl_B 251 QVLKKYET-DCPL---NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQ 326 (369)
T ss_dssp CEEEEEEC-SSCE---EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred ceeeeecC-CCCc---eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCC
Confidence 98888873 3332 2334457899999999888 8999999999999999999999999999999
Q ss_pred CceEEEEeecCCccEEEccccc
Q 020798 299 ENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 299 ~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+++|++|+. |+.|++|+.++
T Consensus 327 ~~~l~s~~~--dg~v~iw~~~~ 346 (369)
T 3zwl_B 327 GTSYASGGE--DGFIRLHHFEK 346 (369)
T ss_dssp SSEEEEEET--TSEEEEEEECH
T ss_pred CCEEEEEcC--CCeEEEEECcc
Confidence 999999984 58999999864
No 21
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-44 Score=329.18 Aligned_cols=296 Identities=26% Similarity=0.461 Sum_probs=245.1
Q ss_pred eeeeeccCCcccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 14 TLTQTLNGHLRAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
.+...+++|.+.|++++|+|++ ++|++|+.|+.|++|++..... ........+.+|...|.+++|+|++++|++|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~---~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK---AYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT---CSCEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc---ccccccceecCCCCcEEEEEECCCCCEEEEEe
Confidence 3456789999999999999875 7999999999999999864221 11223456789999999999999999999999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE---eCCCCCeeEEEEccCC
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL---PAHSDPVTAVDFNRDG 169 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~---~~~~~~v~~~~~~~~~ 169 (321)
.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||.......... ..|...|.+++|+|++
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 9999999999999988999999999999999999999999999999999998765433322 3578889999999986
Q ss_pred --CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeE
Q 020798 170 --TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYC 247 (321)
Q Consensus 170 --~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 247 (321)
..+++++.|++|++||+++++....+ ..|...+.+++|+|+|++|++++.|+.|++||+++++.+..+..+. .
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~-~--- 604 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS-V--- 604 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS-C---
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC-c---
Confidence 57999999999999999988766554 4566789999999999999999999999999999998887765432 2
Q ss_pred EEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC-------------------CCeEEEEecCCCceEEEEeec
Q 020798 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT-------------------DPVISVASHPTENIIASGALD 308 (321)
Q Consensus 248 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-------------------~~v~~~~~~p~~~~l~s~~~d 308 (321)
+......+++.++++++ ++.|++||+++++.+..+..+. ..+++++|+|++++|++|+
T Consensus 605 v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs-- 681 (694)
T 3dm0_A 605 IHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY-- 681 (694)
T ss_dssp EEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE--
T ss_pred EEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc--
Confidence 33333457787777665 5669999999988877665332 1378999999999999998
Q ss_pred CCccEEEccccc
Q 020798 309 NDRTVKIWTQEK 320 (321)
Q Consensus 309 ~~~~i~iw~~~~ 320 (321)
.||.|+||++.+
T Consensus 682 ~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 682 TDGVIRVWGIGR 693 (694)
T ss_dssp TTSEEEEEEC--
T ss_pred CCCeEEEEeccC
Confidence 458999999863
No 22
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.5e-45 Score=310.02 Aligned_cols=295 Identities=16% Similarity=0.281 Sum_probs=242.0
Q ss_pred CcceeeeeccCCcccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC-CCCEE
Q 020798 11 RPYTLTQTLNGHLRAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS-DSRFL 88 (321)
Q Consensus 11 ~~~~~~~~~~~h~~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~l 88 (321)
.+..+.+.+.+|...|++++|+|++ ++|++|+.|+.|++|++.... ........+|...|.+++|+| ++++|
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~l 134 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN------KTSFIQGMGPGDAITGMKFNQFNTNQL 134 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT------CEEEECCCSTTCBEEEEEEETTEEEEE
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc------cceeeecCCcCCceeEEEeCCCCCCEE
Confidence 4667788899999999999999999 999999999999999986421 112223347999999999999 78999
Q ss_pred EEEeCCCcEEEEecCCcceeeeeec---CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEE
Q 020798 89 VSASDDKTIRLWDVPTATCLKTLIG---HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 165 (321)
++++.|+.|++||+.+. ....+.. |...+.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.+++|
T Consensus 135 ~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 135 FVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEF 212 (383)
T ss_dssp EEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEE
Confidence 99999999999999864 3444443 4478999999999999999999999999999 46678888899999999999
Q ss_pred ccCCC-EEEEEeCCCeEEEEeCCC----CceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 166 NRDGT-MIVTSSYDGLCRIWDAST----GHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 166 ~~~~~-~l~~~~~dg~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
+|+++ ++++++.|+.|++||+++ +...... .+...+..++|+| ++++|++++.|+.|++||+++++.+..+.
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 99998 999999999999999987 4444444 4667899999999 99999999999999999999887766665
Q ss_pred ccCCc-------ee-------EEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC--CCCCeEEEEecCCCceEE
Q 020798 240 GHTNS-------KY-------CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG--HTDPVISVASHPTENIIA 303 (321)
Q Consensus 240 ~~~~~-------~~-------~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~ 303 (321)
.|... .. .+......+++++ +|+.||.|++||+.+++.+..+.+ |...+..++|+|++++|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~ 368 (383)
T 3ei3_B 291 IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLA 368 (383)
T ss_dssp ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEE
T ss_pred cccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEE
Confidence 44211 10 1111222345555 788999999999999999999887 456777889999999999
Q ss_pred EEeecCCccEEEccccc
Q 020798 304 SGALDNDRTVKIWTQEK 320 (321)
Q Consensus 304 s~~~d~~~~i~iw~~~~ 320 (321)
+|+ |+.|+||+++.
T Consensus 369 s~s---d~~i~iw~~~~ 382 (383)
T 3ei3_B 369 SGM---GFNILIWNRED 382 (383)
T ss_dssp EEE---TTEEEEEECC-
T ss_pred Eec---CCcEEEEecCC
Confidence 996 48999999875
No 23
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1e-44 Score=309.60 Aligned_cols=297 Identities=16% Similarity=0.236 Sum_probs=253.7
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC----C---C
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD----S---R 86 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~----~---~ 86 (321)
.+.+.+.+|.+.|++++|+| ++|++|+.|+.|++|++..... ..+...+..+.+|...|.+++|+|+ + +
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN--ENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTT--CCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccc--ccCCCcceEEecCCCcEEEEEEecccccCCcccc
Confidence 45677899999999999999 8999999999999999875432 1122345677789999999999999 9 9
Q ss_pred EEEEEeCCCcEEEEecCCcce-----eeeeecC-----cccEEEEEEC----CCCCE-EEEeeCCCcEEEEecCC-----
Q 020798 87 FLVSASDDKTIRLWDVPTATC-----LKTLIGH-----TNYVFCVNFN----PQSNM-IVSGAFDETVRIWDVKT----- 146 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~~wd~~~----- 146 (321)
+|++++.|+.|++||+.+++. ...+..| ...|.+++|+ |+++. |++++.||.|++||+++
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 999999999999999988876 7778888 5899999999 99999 99999999999999987
Q ss_pred -CEEEE-----EE-------eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC--C---CCCeEEEEE
Q 020798 147 -GKCLK-----VL-------PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD--E---NPPVSFVKF 208 (321)
Q Consensus 147 -~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~---~~~~~~~~~ 208 (321)
++.+. .+ ..|...+.+++|+|++ .+++++.|+.|++||+++++....+... + ...+..++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 55444 55 4478899999999999 9999999999999999988777665431 4 667999999
Q ss_pred ccCCCEEEEEecC---CeEEEEeCCCCcEEEEEec-------------cCCceeEEEeEEEecCCeEEEEeCCCCeEEEE
Q 020798 209 SPNGKFILVGTLD---NTLRLWNYSTGKILKTYTG-------------HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLW 272 (321)
Q Consensus 209 ~~~g~~l~~~~~d---~~i~i~d~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vw 272 (321)
+|++++|++++.| +.|++||+++++.+..+.. |...+.++ ...+++++|++++.||.|++|
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL---SFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEE---EECSSSSEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEE---EECCCCCEEEEEeCCCeEEEE
Confidence 9999999999999 9999999999999999987 76655443 334789999999999999999
Q ss_pred EcccceEEEEec------CC---------------CCCeEEEEecCCC----------ceEEEEeecCCccEEEccccc
Q 020798 273 ELQSRKVVQKLE------GH---------------TDPVISVASHPTE----------NIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 273 d~~~~~~~~~~~------~h---------------~~~v~~~~~~p~~----------~~l~s~~~d~~~~i~iw~~~~ 320 (321)
|+.+++.+..+. +| ..+|.+++|+|++ ++|++|+ .|+.|++|+++.
T Consensus 319 d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~--~dg~i~iw~~~~ 395 (397)
T 1sq9_A 319 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVC--LDRSIRWFREAG 395 (397)
T ss_dssp ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEE--TTTEEEEEEEEC
T ss_pred EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEec--CCCcEEEEEcCC
Confidence 999999999998 88 9999999999998 7999998 458999999874
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.2e-43 Score=293.47 Aligned_cols=285 Identities=17% Similarity=0.340 Sum_probs=245.9
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccc--cccccEEEEEECCCCCEEEEEeCCCc
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT--GHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~--~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
..+|...|++++|+|++++|++++ |+.+++|++..... ...+..+. +|...|.+++|+|++++|++++.|+.
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 120 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN-----KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC-----CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc-----eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 347999999999999999999999 99999999864321 12223333 78899999999999999999999999
Q ss_pred EEEEecCCcc--eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 97 IRLWDVPTAT--CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 97 i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
|++||+.+++ ....+..|...+.+++|+|+++.+++++.|+.|++||+++++....+..|...+.+++|+|+++.+++
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEE
Confidence 9999998876 55667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
++.|+.+++||+++++...... ....+..++|+|+++++++++.++.|++||+.+++.. .+..|...... ....
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~---~~~~ 274 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHD--FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLS---LKFA 274 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEE---EEEC
T ss_pred EecCCcEEEEECCCCceEeeec--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeE---EEEC
Confidence 9999999999999887766553 4567899999999999999999999999999988754 45566555433 3345
Q ss_pred cCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+++++|++++.||.|++||+.+++.+.. ..|..+|.+++|+|++++|++++ .|+.|++|++
T Consensus 275 ~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iw~~ 335 (337)
T 1gxr_A 275 YCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGS--GDKKATVYEV 335 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEE--TTSCEEEEEE
T ss_pred CCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEec--CCCeEEEEEE
Confidence 7899999999999999999999887754 34788999999999999999998 4689999986
No 25
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.8e-44 Score=307.35 Aligned_cols=250 Identities=29% Similarity=0.539 Sum_probs=228.6
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
...+.+|...|.+++|+|++++|++|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45678999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred CCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEE
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~ 225 (321)
+++++..+..|...|.+++|+|+++.+++++.|++|++||++++.++..+. .+...+..+.++|+++++++++.|+.|+
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 999999999999999999999999999999999999999999988777654 4566799999999999999999999999
Q ss_pred EEeCCCCcEEEEEeccCCceeEEEeEEEec-------------------CCeEEEEeCCCCeEEEEEcccceEEEEecCC
Q 020798 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVT-------------------NGKYIVSGSEDSCVYLWELQSRKVVQKLEGH 286 (321)
Q Consensus 226 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h 286 (321)
+||+.+++....+.+|...+.++.. .+. ++.+|++|+.|+.|++||+++++.+..+.+|
T Consensus 260 vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 260 VWVVATKECKAELREHRHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEE--CCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEECCCCceeeEecCCCceEEEEEE--cCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 9999999999999888877665543 221 2678999999999999999999999999999
Q ss_pred CCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 287 TDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 287 ~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..+|++++|+|++++|++|+ .|+.|++||.+.
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s--~D~~i~vwd~~~ 369 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCA--DDKTLRVWDYKN 369 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEE--TTTEEEEECCTT
T ss_pred CCcEEEEEEcCCCCEEEEEe--CCCeEEEEECCC
Confidence 99999999999999999998 458999999854
No 26
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-43 Score=292.21 Aligned_cols=289 Identities=27% Similarity=0.419 Sum_probs=249.2
Q ss_pred cCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEE
Q 020798 9 SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFL 88 (321)
Q Consensus 9 ~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l 88 (321)
.+.++++.+.+.+|.+.|++++| |++++|++++.||.|++|++.. ......+..|...|.+++|+|++++|
T Consensus 4 ~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l 74 (313)
T 3odt_A 4 PFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD--------QWLGTVVYTGQGFLNSVCYDSEKELL 74 (313)
T ss_dssp -CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS--------SEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred ccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC--------CEEEEEeecCCccEEEEEECCCCCEE
Confidence 45567788999999999999999 9999999999999999998753 23345667889999999999999999
Q ss_pred EEEeCCCcEEEEecCCc---ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEE
Q 020798 89 VSASDDKTIRLWDVPTA---TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 165 (321)
++++.|+.+++|++... +....+.+|...+.++.+ +++.+++++.|+.|++|| .++....+..|..++.++.|
T Consensus 75 ~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~ 150 (313)
T 3odt_A 75 LFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKV 150 (313)
T ss_dssp EEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEE
T ss_pred EEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEE
Confidence 99999999999998654 456677889999999999 578999999999999999 67778888899999999999
Q ss_pred cc-CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc
Q 020798 166 NR-DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244 (321)
Q Consensus 166 ~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 244 (321)
.| +++.+++++.|+.+++||.. +....+...+...+..++|+|++. +++++.|+.|++||+++++.+..+..|...
T Consensus 151 ~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 227 (313)
T 3odt_A 151 VSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESF 227 (313)
T ss_dssp EETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCce
Confidence 98 88999999999999999943 444555444677899999999998 889999999999999999999999888776
Q ss_pred eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..++. ..+++ .|++++.||.|++||+.+++.+..+..|..+|.+++|+|++++ ++++ .|+.|++|+.+.
T Consensus 228 i~~~~---~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~--~dg~i~iw~~~~ 296 (313)
T 3odt_A 228 VYCIK---LLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDI-IVGS--SDNLVRIFSQEK 296 (313)
T ss_dssp EEEEE---ECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCE-EEEE--TTSCEEEEESCG
T ss_pred EEEEE---EecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCE-EEEe--CCCcEEEEeCCC
Confidence 55443 34667 5889999999999999999999999999999999999999984 4566 468999999864
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.7e-43 Score=315.00 Aligned_cols=288 Identities=38% Similarity=0.632 Sum_probs=252.0
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
.+....+.+|...|.+++|+|++++|++++.|+.+++|+... ..+..+.+|...|.+++|+|++++|++++
T Consensus 252 ~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~l~t~~ 322 (577)
T 2ymu_A 252 GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---------QLLQTLTGHSSSVWGVAFSPDGQTIASAS 322 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---------CEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---------cEEEEEecCCCCeEEEEECCCCCEEEEEe
Confidence 345677889999999999999999999999999999998532 34566788999999999999999999999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
.|+.|++||..... +..+.+|...+.+++++|+++.|++++.|+.|++||. +++.+..+..|...|.+++|+|++++|
T Consensus 323 ~d~~i~~w~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 323 DDKTVKLWNRNGQH-LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 400 (577)
T ss_dssp TTSCEEEEETTSCE-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred CCCeEEEEeCCCCe-eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 99999999986554 5677889999999999999999999999999999995 567788888999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
++++.|+.|++||.. ++....+ ..+...+..++|+|++++|++++.|+.|++||. +++.+..+.+|...+.++ .
T Consensus 401 ~~~~~d~~v~~~~~~-~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~---~ 474 (577)
T 2ymu_A 401 ASASDDKTVKLWNRN-GQLLQTL-TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV---A 474 (577)
T ss_dssp EEEETTSEEEEECTT-CCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEE---E
T ss_pred EEEeCCCEEEEEeCC-CCEEEEe-cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEE---E
Confidence 999999999999964 4444444 356678999999999999999999999999996 567788888887765443 3
Q ss_pred EecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..+++++|++++.|+.|++||. +++.+..+.+|..+|++++|+|++++||+++ .|+.|+|||...
T Consensus 475 ~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~--~dg~v~lwd~~~ 539 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS--DDKTVKLWNRNG 539 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEE--TTSEEEEECTTS
T ss_pred EcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE--CcCEEEEEeCCC
Confidence 4579999999999999999995 6788889999999999999999999999998 458999999753
No 28
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.6e-44 Score=300.99 Aligned_cols=296 Identities=14% Similarity=0.277 Sum_probs=240.4
Q ss_pred CcceeeeeccCCcccEEEEEECCCCCEE-EEecC---CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC--
Q 020798 11 RPYTLTQTLNGHLRAISSVKFSHDGRLL-ASSSA---DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-- 84 (321)
Q Consensus 11 ~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~~~~~---d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-- 84 (321)
+|..+.+.+++|...|++++|+|+++.+ ++++. |+.+++|++.... .......+|...|.+++|+|+
T Consensus 6 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~ 78 (357)
T 3i2n_A 6 KPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD-------LKLLREIEKAKPIKCGTFGATSL 78 (357)
T ss_dssp CCCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS-------EEEEEEEEESSCEEEEECTTCCT
T ss_pred hhHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc-------ccceeeecccCcEEEEEEcCCCC
Confidence 3455666778999999999999999655 56665 9999999986421 111222378899999999998
Q ss_pred -CCEEEEEeCCCcEEEEecCCcc-eeeeeecCcccEEEEE------ECCCCCEEEEeeCCCcEEEEecCCCE-EEEEEeC
Q 020798 85 -SRFLVSASDDKTIRLWDVPTAT-CLKTLIGHTNYVFCVN------FNPQSNMIVSGAFDETVRIWDVKTGK-CLKVLPA 155 (321)
Q Consensus 85 -~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~~ 155 (321)
+++|++++.|+.|++||+.+++ ....+.+|...|.++. |+|+++.|++++.|+.|++||+++++ ....+..
T Consensus 79 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 158 (357)
T 3i2n_A 79 QQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP 158 (357)
T ss_dssp TTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence 6999999999999999999887 7788889999999995 57889999999999999999999876 5666655
Q ss_pred CCC----CeeEEE----EccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc---CCCEEEEEecCCeE
Q 020798 156 HSD----PVTAVD----FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP---NGKFILVGTLDNTL 224 (321)
Q Consensus 156 ~~~----~v~~~~----~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~l~~~~~d~~i 224 (321)
|.. .+.+++ |+|+++.+++++.|+.|++||+++++.... ..+...+..++|+| ++.++++++.|+.|
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--cCCCCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 544 788888 788999999999999999999998876443 23456799999999 99999999999999
Q ss_pred EEEeCCCCcEEEEE-----eccCCceeEEEeEEEecCCe-EEEEeCCCCeEEEEEcccc-------------------eE
Q 020798 225 RLWNYSTGKILKTY-----TGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSR-------------------KV 279 (321)
Q Consensus 225 ~i~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~-------------------~~ 279 (321)
++||+++++.+..+ ..|...+.++. ..+++. +|++|+.||.|++||++.+ +.
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKAHKSTVWQVR---HLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL 313 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEECCSSCEEEEE---EETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred EEEeCcCCCcccceeeeccCCCcCCEEEEE---ECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence 99999876544333 36666554433 346777 8999999999999999753 45
Q ss_pred EEEecCCCCCeEEEEecCCCceEE-EEeecCCccEEEccccc
Q 020798 280 VQKLEGHTDPVISVASHPTENIIA-SGALDNDRTVKIWTQEK 320 (321)
Q Consensus 280 ~~~~~~h~~~v~~~~~~p~~~~l~-s~~~d~~~~i~iw~~~~ 320 (321)
+..+.+|..+|.+++|+|++++|+ +|+ .|+.|++|++++
T Consensus 314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~--~d~~i~iw~~~~ 353 (357)
T 3i2n_A 314 LQNVTLSTQPISSLDWSPDKRGLCVCSS--FDQTVRVLIVTK 353 (357)
T ss_dssp EEEEECCSSCEEEEEECSSSTTEEEEEE--TTSEEEEEEECC
T ss_pred eeccccCCCCeeEEEEcCCCCeEEEEec--CCCcEEEEECCC
Confidence 777889999999999999999998 787 458999999865
No 29
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-44 Score=310.68 Aligned_cols=298 Identities=16% Similarity=0.292 Sum_probs=240.1
Q ss_pred eeeeec-cCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 14 TLTQTL-NGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 14 ~~~~~~-~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
++...+ ++|.+.|++++|+| ++++|++|+.|+.|++|++....... .......+ .|...|.+++|+|++++|+++
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--VYSSSLTY-DCSSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--CCSCSEEE-ECSSCEEEEEECTTSSEEEEE
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--ccceeeec-cCCCCEEEEEEeCCCCEEEEE
Confidence 355566 89999999999999 99999999999999999987632211 11122222 589999999999999999999
Q ss_pred eCCCcEEEEecC---Ccceeeeeec------------CcccEEEEE--ECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe
Q 020798 92 SDDKTIRLWDVP---TATCLKTLIG------------HTNYVFCVN--FNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 92 ~~d~~i~iwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 154 (321)
+.|+.|++||+. .++......+ +...+.++. +++++++|++++.|+.|++||+++++.+..+.
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 209 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE 209 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc
Confidence 999999999995 4443332221 445566666 56789999999999999999999999998888
Q ss_pred C--CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEc----cCCCEEEEEecCCeEEEEe
Q 020798 155 A--HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFS----PNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 155 ~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~l~~~~~d~~i~i~d 228 (321)
. |...|++++|+|++..|++++.||.|++||+++++++..+...+...+..++++ |++.+|++++.|+.|++||
T Consensus 210 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 210 NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEE
Confidence 7 789999999999999999999999999999999888777654556678899665 4688999999999999999
Q ss_pred CCCCcEEEEEeccCCcee-----------------------EEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC
Q 020798 229 YSTGKILKTYTGHTNSKY-----------------------CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
+++++.+..+.++..... .+...... ++.+|++|+.||.|++||+.+++.+..+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 999998888876532111 01112222 678999999999999999998876665554
Q ss_pred -------------------------------------CCCCeEEEEecCC--CceEEEEeecCCccEEEcc
Q 020798 286 -------------------------------------HTDPVISVASHPT--ENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 286 -------------------------------------h~~~v~~~~~~p~--~~~l~s~~~d~~~~i~iw~ 317 (321)
|.+.|++++|+++ +.+|++|+ .||.|+||+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~--~dG~I~iw~ 437 (437)
T 3gre_A 369 PSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACD--NSGLIGIFQ 437 (437)
T ss_dssp C--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEE--TTSCEEEEC
T ss_pred ccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEc--CCceEEEeC
Confidence 8899999999998 78999987 569999995
No 30
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.8e-45 Score=314.50 Aligned_cols=300 Identities=20% Similarity=0.249 Sum_probs=234.9
Q ss_pred CCcceeeeeccCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC-CCCE
Q 020798 10 FRPYTLTQTLNGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS-DSRF 87 (321)
Q Consensus 10 ~~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~ 87 (321)
...+.+.+...+|.+.|++++|+| ++++||+|+.||.|++|++.... ......+.+|.+.|.+|+|+| ++++
T Consensus 106 ~~~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~------~~~~~~~~gH~~~V~~l~f~p~~~~~ 179 (435)
T 4e54_B 106 LDSYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD------KPTFIKGIGAGGSITGLKFNPLNTNQ 179 (435)
T ss_dssp TTTTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS------CCEEECCCSSSCCCCEEEECSSCTTE
T ss_pred ccceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC------ceeEEEccCCCCCEEEEEEeCCCCCE
Confidence 334555566678999999999999 56799999999999999875321 223445678999999999998 6889
Q ss_pred EEEEeCCCcEEEEecCCcceeeeee--cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEE
Q 020798 88 LVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 88 l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 165 (321)
|++|+.|++|++||+++........ .+...+.+++|+|++++|++|+.||.|++||++. +.+..+..|...|.+++|
T Consensus 180 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 180 FYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVAL 258 (435)
T ss_dssp EEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEE
T ss_pred EEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeee
Confidence 9999999999999998765433222 2334577899999999999999999999999864 456677889999999999
Q ss_pred ccCCC-EEEEEeCCCeEEEEeCCCCceeeee--ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC
Q 020798 166 NRDGT-MIVTSSYDGLCRIWDASTGHCMKTL--IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242 (321)
Q Consensus 166 ~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 242 (321)
+|++. ++++++.|+.|++||+++.+....+ ...+...|..++|+|+|++|++++.|+.|++||+.+++....+..|.
T Consensus 259 ~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp CTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred cCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 99876 7889999999999999876544332 23456789999999999999999999999999999988777776543
Q ss_pred Cc----eeEEEeEEEecCCeEEEEe------------CCCCeEEEEEcccceEEEEec-CCCCCeEEE-EecCCCceEEE
Q 020798 243 NS----KYCISSTFSVTNGKYIVSG------------SEDSCVYLWELQSRKVVQKLE-GHTDPVISV-ASHPTENIIAS 304 (321)
Q Consensus 243 ~~----~~~~~~~~~~~~~~~l~~~------------~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~-~~~p~~~~l~s 304 (321)
.. ...+...+. +++..++++ ..++.|++||..+++.+..+. +|...|.++ +|+|++.+||+
T Consensus 339 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~las 417 (435)
T 4e54_B 339 HRHFQHLTPIKAAWH-PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLAS 417 (435)
T ss_dssp CCCCSSSCCCBCEEC-SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEE
T ss_pred ccccccceeEEEEEc-CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEE
Confidence 21 111222222 334444443 244689999999999887764 688889988 69999999999
Q ss_pred EeecCCccEEEccccc
Q 020798 305 GALDNDRTVKIWTQEK 320 (321)
Q Consensus 305 ~~~d~~~~i~iw~~~~ 320 (321)
|+ |+.|+||+.+.
T Consensus 418 g~---d~~i~iW~~~~ 430 (435)
T 4e54_B 418 AM---GYHILIWSQQE 430 (435)
T ss_dssp EC---SSEEEECCCC-
T ss_pred Ec---CCcEEEEECCc
Confidence 75 46899999874
No 31
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-44 Score=311.33 Aligned_cols=293 Identities=16% Similarity=0.276 Sum_probs=246.1
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeCCCcEE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIR 98 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~ 98 (321)
..|...|++++|+|++++|++++.|+.+++|++.... .....+..+.+|...|.+++|+|+ +++|++++.|+.|+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEAN----NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTT----SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeeccccc----ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence 3588999999999999999999999999999886421 112356677889999999999998 89999999999999
Q ss_pred EEecCCcc------eee---eeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCC------CCCeeE
Q 020798 99 LWDVPTAT------CLK---TLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAH------SDPVTA 162 (321)
Q Consensus 99 iwd~~~~~------~~~---~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~------~~~v~~ 162 (321)
+||+.+.+ ... ....|...+.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+ ...+.+
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEE
Confidence 99998876 222 23678899999999999 789999999999999999999988888776 788999
Q ss_pred EEEccCC-CEEEEEeCCC---eEEEEeCCCCceeeeecc-CCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEE
Q 020798 163 VDFNRDG-TMIVTSSYDG---LCRIWDASTGHCMKTLID-DENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILK 236 (321)
Q Consensus 163 ~~~~~~~-~~l~~~~~dg---~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~~~ 236 (321)
++|+|++ .++++++.++ .|++||++++........ .+...+..++|+| ++++|++++.|+.|++||+++++.+.
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce
Confidence 9999997 5899999998 999999998643333333 5677899999999 99999999999999999999999999
Q ss_pred EEeccCCceeEEEeEEEecCC-eEEEEeCCCCeEEEEEcccceEEEEe--------------------------------
Q 020798 237 TYTGHTNSKYCISSTFSVTNG-KYIVSGSEDSCVYLWELQSRKVVQKL-------------------------------- 283 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~-------------------------------- 283 (321)
.+..|...+.++. + .+++ .+|++++.||.|++||+.+.......
T Consensus 300 ~~~~~~~~v~~~~--~-s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (416)
T 2pm9_A 300 QFPARGNWCFKTK--F-APEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL 376 (416)
T ss_dssp EEECSSSCCCCEE--E-CTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCC
T ss_pred eecCCCCceEEEE--E-CCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc
Confidence 9998877665543 3 3666 89999999999999999776432211
Q ss_pred ---cCCCCCeEEEEecCCCceEEEEeecCCccEEEcccccC
Q 020798 284 ---EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 284 ---~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~~ 321 (321)
..|..++.+++|+|+|++|++|+ .|+.|+||+++-|
T Consensus 377 ~~~~~~~~~~~~~~~s~dg~~la~~~--~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 377 QAPTWYGEPSPAAHWAFGGKLVQITP--DGKGVSITNPKIS 415 (416)
T ss_dssp CCCSTTCCCSCCCEEETTTEEECBCT--TSSCBCCBCCCCC
T ss_pred cCCccccCCccceEEeeCCeEEEEeC--CCCeEEEEEeccC
Confidence 11677888999999999999998 4689999998754
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.9e-43 Score=297.08 Aligned_cols=288 Identities=18% Similarity=0.252 Sum_probs=240.3
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIR 98 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~ 98 (321)
++.|.++|++++|+|++++|++++.|+.|++|++.... ...+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~ 77 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK------WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAY 77 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE------EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc------EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEE
Confidence 45699999999999999999999999999999875421 114567788999999999999999999999999999
Q ss_pred EEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEE----EEEEeCCCCCeeEEEEccCCCEE
Q 020798 99 LWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC----LKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 99 iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
+||+.+++.... +..|...+.+++|+|++++|++++.|+.|++||++.+.. ......|...|.+++|+|+++.+
T Consensus 78 vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 78 VWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp EEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE
T ss_pred EEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEE
Confidence 999988764433 467889999999999999999999999999999987652 22335678999999999999999
Q ss_pred EEEeCCCeEEEEeCC------------------CCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE
Q 020798 173 VTSSYDGLCRIWDAS------------------TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI 234 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~ 234 (321)
++++.|+.+++||++ .++....+ ..+...+..++|+|++++|++++.|+.|++||+++++.
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA 236 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 999999999999964 44444443 35566799999999999999999999999999999999
Q ss_pred EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc--ceE--------------------------------E
Q 020798 235 LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS--RKV--------------------------------V 280 (321)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~--~~~--------------------------------~ 280 (321)
+..+..+.....++. ..+++.++++| .|+.|++|++.. ++. .
T Consensus 237 ~~~~~~~~~~v~~~~---~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
T 1k8k_C 237 VATLASETLPLLAVT---FITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE 312 (372)
T ss_dssp EEEEECSSCCEEEEE---EEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---
T ss_pred eEEEccCCCCeEEEE---EecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccc
Confidence 999988876655443 34688888887 899999999987 321 0
Q ss_pred ------EEe-cCCCCCeEEEEec-CCC---ceEEEEeecCCccEEEcccc
Q 020798 281 ------QKL-EGHTDPVISVASH-PTE---NIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 281 ------~~~-~~h~~~v~~~~~~-p~~---~~l~s~~~d~~~~i~iw~~~ 319 (321)
..+ .+|..+|++++|+ +++ .+|++|+ .||.|++|+++
T Consensus 313 ~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~--~Dg~i~~W~~~ 360 (372)
T 1k8k_C 313 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTG--MDGGMSIWDVR 360 (372)
T ss_dssp ------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEE--TTSEEEEEEHH
T ss_pred cCccccccccccccCCcceeEEecCCCcceeeEEEec--CCCceEEEEec
Confidence 223 4899999999966 666 9999998 45899999975
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-43 Score=298.61 Aligned_cols=288 Identities=18% Similarity=0.373 Sum_probs=239.6
Q ss_pred eeccCCcccEEEEEECCC----CCEEEEecCCceEEEeeccccCCCCCCCCCcccccc-----cccccEEEEEECCC---
Q 020798 17 QTLNGHLRAISSVKFSHD----GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT-----GHEQGVSDLVFSSD--- 84 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~----g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~i~~~~~~~~--- 84 (321)
....+|.+.|++++|+|+ ...+++++.++.|++|++.... .+..+. .|...|.+++|+|+
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 83 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQG--------EIRLLQSYVDADADENFYTCAWTYDSNT 83 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGG--------CEEEEEEEECSCTTCCEEEEEEEECTTT
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCc--------EEEeeeeccccCCCCcEEEEEeccCCCC
Confidence 445699999999999984 4456666667799999986432 122222 36688999999998
Q ss_pred -CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecCCCEEEEEE---eCCCCC
Q 020798 85 -SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVKTGKCLKVL---PAHSDP 159 (321)
Q Consensus 85 -~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~---~~~~~~ 159 (321)
+++|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....+ ..|...
T Consensus 84 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 84 SHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 67999999999999999999998888999999999999999 8999999999999999999999988887 679999
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec---------------------------cCCCCCeEEEEEccCC
Q 020798 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI---------------------------DDENPPVSFVKFSPNG 212 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~g 212 (321)
|.+++|+|+++.+++++.|+.|++||+++++....+. ..+...+.+++|+ +
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 9999999999999999999999999998765432211 1256678889998 7
Q ss_pred CEEEEEecCCeEEEEeCCCCcE--------------EEEEeccCCceeEEEeEEEecC--CeEEEEeCCCCeEEEEEccc
Q 020798 213 KFILVGTLDNTLRLWNYSTGKI--------------LKTYTGHTNSKYCISSTFSVTN--GKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 213 ~~l~~~~~d~~i~i~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~vwd~~~ 276 (321)
+++++++.|+.|++||+.+++. +..+..|...+.++.. .++ +++|++|+.||.|++||+.+
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF---SMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCC---EECTTSSEEEEECTTSCEEEEECCS
T ss_pred CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEE---cCCCCCcEEEEEecCCcEEEEECCC
Confidence 7999999999999999887643 6777777666555433 246 99999999999999999988
Q ss_pred ce----EEEEecCC--CCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 277 RK----VVQKLEGH--TDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 277 ~~----~~~~~~~h--~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
++ ....+.+| ..+|++++|+|++++|++|+ .|+.|++||+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~ 365 (366)
T 3k26_A 319 EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC--DDASIWRWDRL 365 (366)
T ss_dssp SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE--TTSEEEEEEC-
T ss_pred CCCccccceEEcccccCCceEEEEeCCCCCeEEEEe--CCCEEEEEEec
Confidence 64 44567777 78999999999999999998 45899999985
No 34
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-43 Score=299.86 Aligned_cols=291 Identities=17% Similarity=0.287 Sum_probs=241.6
Q ss_pred CCcccEEEEEECCCCC-EEEEecCCceEEEeec----cccCC------CC--CCCCCcccccccccccEEEEEECCCCCE
Q 020798 21 GHLRAISSVKFSHDGR-LLASSSADKTLLTYSL----SSISN------SD--STPPSPLQKFTGHEQGVSDLVFSSDSRF 87 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~----~~~~~------~~--~~~~~~~~~~~~h~~~i~~~~~~~~~~~ 87 (321)
.|.+.|++++|+|+|+ +||+|+.|+.+++|++ ..... .. ..+........+|...|.+++|+|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4568999999999999 9999999999999998 43220 00 0000000112236889999999999999
Q ss_pred EEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE---------------
Q 020798 88 LVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV--------------- 152 (321)
Q Consensus 88 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~--------------- 152 (321)
|++++.|+.|++|| .+++....+.+|...+.+++|+|++++|++++.|+.|++||+++++....
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAEN 201 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecc
Confidence 99999999999999 56677788889999999999999999999999999999999987765432
Q ss_pred -----------------------------------------EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce
Q 020798 153 -----------------------------------------LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191 (321)
Q Consensus 153 -----------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 191 (321)
+..|..++.+++|+|+++.+++++.|+.|++||+++++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 202 HSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp ----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred ccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 234667899999999999999999999999999998876
Q ss_pred eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEE
Q 020798 192 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYL 271 (321)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~v 271 (321)
...+ ..+...+..++|+|++ ++++++.|+.|++||+++++.+..+..|.....++ ...+++.+|++++.||.|++
T Consensus 282 ~~~~-~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~---~~s~~~~~l~~~~~dg~i~i 356 (425)
T 1r5m_A 282 QNCF-YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAG---RISQDGQKYAVAFMDGQVNV 356 (425)
T ss_dssp SEEE-CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEE---EECTTSSEEEEEETTSCEEE
T ss_pred ceEe-cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEE---EEcCCCCEEEEEECCCeEEE
Confidence 6655 3456679999999999 99999999999999999999999988877665443 34578999999999999999
Q ss_pred EEcccce--------------------EEEEecCCCC--CeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 272 WELQSRK--------------------VVQKLEGHTD--PVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 272 wd~~~~~--------------------~~~~~~~h~~--~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
||+.+++ .+..+.+|.. +|.+++|+|++++|++++ .|+.|++|+++
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iw~~~ 424 (425)
T 1r5m_A 357 YDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY--SLQEGSVVAIP 424 (425)
T ss_dssp EECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE--SSSCCEEEECC
T ss_pred EECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe--cCceEEEEeec
Confidence 9999888 8889999976 999999999999999998 45899999986
No 35
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-43 Score=291.16 Aligned_cols=249 Identities=25% Similarity=0.448 Sum_probs=225.0
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
+...+.+|...|.+++|+|++.++++++.|+.|++||+.. ...+..+..|...+.+++|+|++++|++++.|
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~--------~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d 143 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN--------GKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV 143 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT--------TEEEEEEECCTTCCCCEEECTTSSEEEEECTT
T ss_pred eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--------CCEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 3456899999999999999999999999999999998753 23455667788889999999999999999999
Q ss_pred CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
+.|++|++++++....+..|...+.+++|+|++++|++++.|+.|++||+++++.+..+..|..+|.+++|+|++++|++
T Consensus 144 g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s 223 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT 223 (321)
T ss_dssp SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE
T ss_pred CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE
Confidence 99999999999888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
++.|+.|++||++++.....+ ..+...+..++|+|++++|++++.|+.|++||+.+++.+..+.+|...+..+. ..
T Consensus 224 ~s~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~---~s 299 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLAGTL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK---YN 299 (321)
T ss_dssp ECTTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE---EC
T ss_pred EcCCCeEEEEECCCcceeEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEE---EC
Confidence 999999999999988766655 45667799999999999999999999999999999999999998887755443 34
Q ss_pred cCCeEEEEeCCCCeEEEEEcc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~ 275 (321)
+++.+|++++.||.|++||..
T Consensus 300 ~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 300 GNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTSSEEEEEETTCCEEEEECC
T ss_pred CCCCEEEEEeCCCeEEEEeCC
Confidence 789999999999999999963
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.5e-42 Score=298.35 Aligned_cols=289 Identities=15% Similarity=0.241 Sum_probs=239.1
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIR 98 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~ 98 (321)
+..| ..+....|+|++++|++|+.|+.|++|++.. ......+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~ 164 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF--------NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLK 164 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS--------CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC--------cceeeecccccCccEEEEECCCCCEEEEEeCCCeEE
Confidence 3444 4555668899999999999999999998653 234555678999999999999999999999999999
Q ss_pred EEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCC---C------------------
Q 020798 99 LWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAH---S------------------ 157 (321)
Q Consensus 99 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~---~------------------ 157 (321)
+||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..+ .
T Consensus 165 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 244 (420)
T 3vl1_A 165 IWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHE 244 (420)
T ss_dssp EEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGG
T ss_pred EEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeee
Confidence 9999999988889999999999999999999999999999999999999988877643 2
Q ss_pred ---CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-EEEEEecCCeEEEEeCCCCc
Q 020798 158 ---DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-FILVGTLDNTLRLWNYSTGK 233 (321)
Q Consensus 158 ---~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~d~~i~i~d~~~~~ 233 (321)
..+.+++|+|+++.+++++.||.|++||+++++....+...+...+..++|+|+++ +|++++.|+.|++||+++++
T Consensus 245 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 245 ISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp GCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred cccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 44555666889999999999999999999998877777666777899999999999 99999999999999999874
Q ss_pred -EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc---------eEEEEecCCCCCeEEEEecCCCc---
Q 020798 234 -ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR---------KVVQKLEGHTDPVISVASHPTEN--- 300 (321)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---------~~~~~~~~h~~~v~~~~~~p~~~--- 300 (321)
++..+..+.... +...+. +++.+|++++.||.|++|++... .....+.+|...|.+++|+|++.
T Consensus 325 ~~~~~~~~~~~~~--v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g 401 (420)
T 3vl1_A 325 CPVGEFLINEGTP--INNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNG 401 (420)
T ss_dssp SCSEEEEESTTSC--EEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSC
T ss_pred CchhhhhccCCCC--ceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcc
Confidence 366666643322 233333 47889999999999999998763 12234567888999999999998
Q ss_pred eEEEEeecCCccEEEcccccC
Q 020798 301 IIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~~~ 321 (321)
.+++.+ ++|.+.+|+.+.+
T Consensus 402 ~l~a~g--~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 402 EVLEVG--KNNFCALYNLSNP 420 (420)
T ss_dssp EEEEEE--TTTEEEEEESCC-
T ss_pred eEEEEc--CCceEEEEeccCC
Confidence 444444 4589999999863
No 37
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-42 Score=296.27 Aligned_cols=304 Identities=22% Similarity=0.323 Sum_probs=243.8
Q ss_pred eeeeeccCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCc-----ccccccccccEEEEEECC-CCC
Q 020798 14 TLTQTLNGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSP-----LQKFTGHEQGVSDLVFSS-DSR 86 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~-----~~~~~~h~~~i~~~~~~~-~~~ 86 (321)
+....+.+|.+.|++++|+| ++++|++|+.||.|++|++............. .....+|...|.+++|+| +++
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 34566789999999999999 99999999999999999987543211110000 111235999999999999 778
Q ss_pred EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCC---CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEE
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ---SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 163 (321)
+|++++.|+.|++||+.+++....+. +...+.++.++|. +.++++++.++.|++||+++++....+..|...|.++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV 192 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence 99999999999999999988766655 6778899999884 4589999999999999999998888899999999999
Q ss_pred EEccCCC-EEEEEeCCCeEEEEeCCCCceeeeec---------------cCCCCCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 164 DFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLI---------------DDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 164 ~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
+|+|++. ++++++.||.|++||++++....... ..+...+..++|+|++++|++++.|+.|++|
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 9999998 58899999999999998764221111 3455679999999999999999999999999
Q ss_pred eCCCCcEEEEEeccCC--ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 228 NYSTGKILKTYTGHTN--SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 228 d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
|+.+++....+..+.. .............+..+++++.++.|++||+.+++.+..+.+|..+|.+++|+|++++|++|
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEE
Confidence 9998876544332211 01111122222345567777889999999999999999999999999999999999999999
Q ss_pred eecCCccEEEccccc
Q 020798 306 ALDNDRTVKIWTQEK 320 (321)
Q Consensus 306 ~~d~~~~i~iw~~~~ 320 (321)
+. ||.|++|+.+.
T Consensus 353 ~~--dg~i~iw~~~~ 365 (408)
T 4a11_B 353 SR--DCNILAWVPSL 365 (408)
T ss_dssp ET--TSCEEEEEECC
T ss_pred CC--CCeEEEEeCCC
Confidence 84 58999999864
No 38
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.6e-42 Score=319.41 Aligned_cols=292 Identities=21% Similarity=0.376 Sum_probs=259.5
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
.+.+.+++|...|++++|+|+|++||+++.||.|++|++.. ...+..+.+|...|.+++|+|++++|++++.
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 75 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET--------QVEVRSIQVTETPVRAGKFIARKNWIIVGSD 75 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--------TEEEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC--------CceEEEEecCCCcEEEEEEeCCCCEEEEEeC
Confidence 45677899999999999999999999999999999998753 3356677889999999999999999999999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEcc-CCCE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNR-DGTM 171 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~ 171 (321)
||.|++||+.+++....+.+|...|.+++|+|++.+|++++.||.|++||+.++ .....+..|..++.+++|+| ++..
T Consensus 76 dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 76 DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE
Confidence 999999999999998999999999999999999999999999999999999887 67778889999999999999 7889
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc--CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEE
Q 020798 172 IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP--NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCIS 249 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 249 (321)
+++++.||.|++||++++.....+...+...+..++|+| ++.++++++.|+.|++||+.+++.+..+.+|...+.++
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~- 234 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFA- 234 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEE-
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEE-
Confidence 999999999999999887766666655557788999999 99999999999999999999999999998887765443
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCc--eEEEEeecCCccEEEcccc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN--IIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~--~l~s~~~d~~~~i~iw~~~ 319 (321)
...+++.++++++.||.|++||+.+++.+..+..|..++.+++|+|++. ++++++ ++.+.+|+..
T Consensus 235 --~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 301 (814)
T 3mkq_A 235 --VFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF---DNGFTVLSLG 301 (814)
T ss_dssp --EECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE---TTEEEEEECS
T ss_pred --EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe---CCCEEEEEcC
Confidence 3457899999999999999999999999999999999999999999987 455554 3457788764
No 39
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-42 Score=288.74 Aligned_cols=252 Identities=25% Similarity=0.467 Sum_probs=222.5
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
.....+..|...|.+++|+|+|++|++|+.|+.+++|++.... ........+.+|...|.++.|++++. +++++.
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~ 162 (340)
T 1got_B 88 NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE----GNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG 162 (340)
T ss_dssp CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS----BSCEEEEEEECCSSCEEEEEEEETTE-EEEEET
T ss_pred CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC----CcceeEEEecCCCccEEEEEECCCCc-EEEEEC
Confidence 3456678899999999999999999999999999999976421 11223456778999999999998875 889999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEE
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||++++++...+..|...|.+++|+|+++.|+
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 242 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEE
Confidence 99999999999999899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeeeeccC-CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 174 TSSYDGLCRIWDASTGHCMKTLIDD-ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+++.|++|++||+++++....+... ....+..++|+|+|++|++++.|+.|++||+.+++.+..+.+|...+.++.
T Consensus 243 s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~--- 319 (340)
T 1got_B 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLG--- 319 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE---
T ss_pred EEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEE---
Confidence 9999999999999988766554322 234689999999999999999999999999999999999999988766543
Q ss_pred EecCCeEEEEeCCCCeEEEEE
Q 020798 253 SVTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd 273 (321)
..+++.+|++|+.||.|++||
T Consensus 320 ~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 320 VTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEEC
T ss_pred EcCCCCEEEEEcCCccEEecC
Confidence 347899999999999999996
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-43 Score=303.87 Aligned_cols=289 Identities=19% Similarity=0.383 Sum_probs=243.2
Q ss_pred CcccEEEEEECCCCC-EEEEe----------cCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE
Q 020798 22 HLRAISSVKFSHDGR-LLASS----------SADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 22 h~~~v~~~~~s~~g~-~l~~~----------~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~ 90 (321)
+...|.+++|+|+|+ +|+++ +.|+.|++|++...... .++.. ..|...|.+++|+|++++|++
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~-----~~~~~-~~~~~~v~~~~~s~~~~~l~~ 84 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE-----KPIAS-LQVDSKFNDLDWSHNNKIIAG 84 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC-----SCSCC-CCCSSCEEEEEECSSSSCEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC-----cEEEE-EecCCceEEEEECCCCCeEEE
Confidence 456788999999997 99999 89999999998653211 12222 257889999999999999999
Q ss_pred EeCCCcEEEEecCC----cceeeeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCE------EEEE---EeCC
Q 020798 91 ASDDKTIRLWDVPT----ATCLKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGK------CLKV---LPAH 156 (321)
Q Consensus 91 ~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~------~~~~---~~~~ 156 (321)
++.|+.|++||+.. .+....+.+|...|.+++|+|+ +++|++++.|+.|++||+++++ .... ...|
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 99999999999987 3467788899999999999998 8899999999999999998876 2222 3568
Q ss_pred CCCeeEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeeccCC-----CCCeEEEEEccCC-CEEEEEecCC---eEEE
Q 020798 157 SDPVTAVDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLIDDE-----NPPVSFVKFSPNG-KFILVGTLDN---TLRL 226 (321)
Q Consensus 157 ~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~g-~~l~~~~~d~---~i~i 226 (321)
...+.+++|+|+ +..+++++.|+.|++||+++++....+.... ...+..++|+|++ .++++++.|+ .|++
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 889999999999 7899999999999999999988776664432 5679999999997 6889999998 9999
Q ss_pred EeCCCC-cEEEEEe-ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCC-ceEE
Q 020798 227 WNYSTG-KILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE-NIIA 303 (321)
Q Consensus 227 ~d~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~ 303 (321)
||++++ +.+..+. +|...+.++ .+.+.++.+|++++.||.|++||+++++.+..+.+|..+|.+++|+|++ .+|+
T Consensus 245 ~d~~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 245 WDLRNANTPLQTLNQGHQKGILSL--DWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp EETTSTTSCSBCCCSCCSSCEEEE--EECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEE
T ss_pred EeCCCCCCCcEEeecCccCceeEE--EeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEE
Confidence 999986 5666666 676655443 3333389999999999999999999999999999999999999999999 8999
Q ss_pred EEeecCCccEEEccccc
Q 020798 304 SGALDNDRTVKIWTQEK 320 (321)
Q Consensus 304 s~~~d~~~~i~iw~~~~ 320 (321)
+++. |+.|++|+++.
T Consensus 323 s~~~--d~~i~iw~~~~ 337 (416)
T 2pm9_A 323 CASF--DNKIEVQTLQN 337 (416)
T ss_dssp ECCS--SSEEEEEESCC
T ss_pred EEec--CCcEEEEEccC
Confidence 9984 58999999864
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.6e-44 Score=301.65 Aligned_cols=285 Identities=13% Similarity=0.149 Sum_probs=223.6
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRL 99 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~i 99 (321)
+.|..+|++++|+|+|++|++|+.|+.|++|++... ....+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN------GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYV 81 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT------EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEE
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC------ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 346779999999999999999999999999998632 01345677889999999999999999999999999999
Q ss_pred EecCCcc---eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEE---EEEEeC-CCCCeeEEEEccCCCEE
Q 020798 100 WDVPTAT---CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC---LKVLPA-HSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 100 wd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l 172 (321)
||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. |...|.+++|+|++++|
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp C------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred EEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 9998876 5666778999999999999999999999999999999988763 566666 99999999999999999
Q ss_pred EEEeCCCeEEEEeCCC------------------CceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE
Q 020798 173 VTSSYDGLCRIWDAST------------------GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI 234 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~ 234 (321)
++++.|+.|++||++. +++...+ .+...+..++|+|++++|++++.|+.|++||+.+++.
T Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 9999999999999852 2333333 5667899999999999999999999999999998876
Q ss_pred ----EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce--------------------------------
Q 020798 235 ----LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK-------------------------------- 278 (321)
Q Consensus 235 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-------------------------------- 278 (321)
+..+..|...+.++. ..+++++|++|+.++.+ +|+.....
T Consensus 240 ~~~~~~~~~~~~~~v~~~~---~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLL---WANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPV 315 (377)
T ss_dssp CEEECCCEECSSSCEEEEE---EEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----
T ss_pred cceeeEeecCCCCceEEEE---EcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccc
Confidence 677777777655443 34789999999877766 66654211
Q ss_pred -------EEE-------------EecCCCCCeEEEEecCCCc----eEEEEeecCCccEEEccc
Q 020798 279 -------VVQ-------------KLEGHTDPVISVASHPTEN----IIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 279 -------~~~-------------~~~~h~~~v~~~~~~p~~~----~l~s~~~d~~~~i~iw~~ 318 (321)
... ....|.+.|+++++.+... .|+|||. ||.|+|||+
T Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~--Dg~i~iWdl 377 (377)
T 3dwl_C 316 SFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGT--DGRVVLWTL 377 (377)
T ss_dssp ---------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEET--TSEEEEECC
T ss_pred ccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecC--CCcEEEecC
Confidence 000 0112899999999766543 5999985 589999985
No 42
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-42 Score=293.21 Aligned_cols=287 Identities=15% Similarity=0.194 Sum_probs=216.6
Q ss_pred ccEEEEEECCCCCEEEEecCC-------ceEEEeeccccCCCCCCCCC--cccccccccccEEEEEECCCCCEEEEEe--
Q 020798 24 RAISSVKFSHDGRLLASSSAD-------KTLLTYSLSSISNSDSTPPS--PLQKFTGHEQGVSDLVFSSDSRFLVSAS-- 92 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d-------~~v~~~~~~~~~~~~~~~~~--~~~~~~~h~~~i~~~~~~~~~~~l~~~~-- 92 (321)
.+|++++|+|||++|++|+.+ +.|++|++............ ....+.+|...|.+++++ ++.+++|+
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 589999999999999998754 35999987542211000000 112356777888887764 45666653
Q ss_pred ---------CCCcEEEEecCCcceee----e-----eecCcccEEEEEECCCCCEEEE--eeCCCcEEEEecCCCEEEEE
Q 020798 93 ---------DDKTIRLWDVPTATCLK----T-----LIGHTNYVFCVNFNPQSNMIVS--GAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 93 ---------~d~~i~iwd~~~~~~~~----~-----~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~~wd~~~~~~~~~ 152 (321)
.|+.+++|++....... . ...+...+.+++|+|||+++++ ++.|++|++||+++++++..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 56789999986543211 1 1234456889999999998764 45789999999999998888
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceee-eeccCCCCCeEEEEEccCCCEEEEEecCC----eEEEE
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK-TLIDDENPPVSFVKFSPNGKFILVGTLDN----TLRLW 227 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~~~d~----~i~i~ 227 (321)
+. |...|.+++|+|+++++++++.++ +.+|+..+++... .....+...+..++|+|+++++++++.|+ .+++|
T Consensus 173 ~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 173 IE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred eC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 75 777899999999999999988665 5556555555443 33344566789999999999999998887 68889
Q ss_pred eCCCCcE----EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe-cCCCCCeEEEEecCCCceE
Q 020798 228 NYSTGKI----LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL-EGHTDPVISVASHPTENII 302 (321)
Q Consensus 228 d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l 302 (321)
++..... ...+.+|...+.+ ....|+|++||+|+.|+.|+|||+++++++..+ .+|..+|++++|+||+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~---~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITS---MDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEE---EEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEE
T ss_pred ccccceecceeeeeecCCCCCeEe---EEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEE
Confidence 9876543 3345566665444 334589999999999999999999999998875 7899999999999999999
Q ss_pred EEEeecCCccEEEcccc
Q 020798 303 ASGALDNDRTVKIWTQE 319 (321)
Q Consensus 303 ~s~~~d~~~~i~iw~~~ 319 (321)
|+||. |++|+||++.
T Consensus 328 aS~S~--D~tvrvw~ip 342 (365)
T 4h5i_A 328 ASVSA--ANTIHIIKLP 342 (365)
T ss_dssp EEEET--TSEEEEEECC
T ss_pred EEEeC--CCeEEEEEcC
Confidence 99995 5899999984
No 43
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.4e-42 Score=295.99 Aligned_cols=291 Identities=20% Similarity=0.376 Sum_probs=229.2
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCC---CCCCCccccccccc------------ccEEEEEECCCC-
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSD---STPPSPLQKFTGHE------------QGVSDLVFSSDS- 85 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~---~~~~~~~~~~~~h~------------~~i~~~~~~~~~- 85 (321)
|.+.|++++|+|+|++||+|+.||.|++|++....... .........+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999987543211 11112355677898 889999999998
Q ss_pred -CEEEEEeCCCcEEEEecCCccee---------------------------------------ee-eecCcccEEEEEEC
Q 020798 86 -RFLVSASDDKTIRLWDVPTATCL---------------------------------------KT-LIGHTNYVFCVNFN 124 (321)
Q Consensus 86 -~~l~~~~~d~~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~ 124 (321)
.+|++++.|+.|++||+.++... .. ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 78999999999999998764331 11 35799999999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCC-CEEEE-------EEeCCCCCeeEEEEccCC-CEEEEEeCCCeEEEEeCCCCce----
Q 020798 125 PQSNMIVSGAFDETVRIWDVKT-GKCLK-------VLPAHSDPVTAVDFNRDG-TMIVTSSYDGLCRIWDASTGHC---- 191 (321)
Q Consensus 125 ~~~~~l~~~~~dg~i~~wd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~---- 191 (321)
|++++|+++ .|+.|++||++. ++... .+..|...|.+++|+|++ ..|++++.||.|++||+++++.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 999999998 799999999984 33443 245788999999999998 8999999999999999998765
Q ss_pred eeeeccCCCC------------CeEEEEEccCCCEEEEEecCCeEEEEeCCC-CcEEEEEeccCCcee------------
Q 020798 192 MKTLIDDENP------------PVSFVKFSPNGKFILVGTLDNTLRLWNYST-GKILKTYTGHTNSKY------------ 246 (321)
Q Consensus 192 ~~~~~~~~~~------------~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~------------ 246 (321)
...+. .+.. .+..++|+|+|++|++++. +.|++||+++ ++.+..+..|.....
T Consensus 266 ~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 266 SKLFE-EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp CEEEC-CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeEec-cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 33333 3332 7999999999999999988 9999999987 788888877643111
Q ss_pred EEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec---------------------------------CCCCCeEEE
Q 020798 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE---------------------------------GHTDPVISV 293 (321)
Q Consensus 247 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---------------------------------~h~~~v~~~ 293 (321)
.+......+++.+|++|+.||.|++||+.+++.+. +. .+...|..+
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 00012334789999999999999999999887653 22 234578999
Q ss_pred EecCCCceEEEEeecCCccEEEcccc
Q 020798 294 ASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 294 ~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+|+|++++||+++.+ .+++|..+
T Consensus 423 ~~~p~~~~la~~~~~---~~~~~~~~ 445 (447)
T 3dw8_B 423 AWHPKENIIAVATTN---NLYIFQDK 445 (447)
T ss_dssp EECSSSSEEEEECSS---CEEEEECC
T ss_pred EECCCCCEEEEEecc---eeeeeccc
Confidence 999999999999743 48888754
No 44
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.1e-41 Score=277.07 Aligned_cols=247 Identities=23% Similarity=0.431 Sum_probs=206.8
Q ss_pred ccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC--cceeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEe
Q 020798 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT--ATCLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWD 143 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd 143 (321)
.+.+|...|.+++|+|+|++|++|+.|+.|++||+.. .+.+..+.+|...|.+++|+|+ +++|++|+.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4578999999999999999999999999999999974 3567788999999999999874 88999999999999999
Q ss_pred cCCCE--EEEEEeCCCCCeeEEEEccC--CCEEEEEeCCCeEEEEeCCCCcee-eeeccCCCCCeEEEEEccC-------
Q 020798 144 VKTGK--CLKVLPAHSDPVTAVDFNRD--GTMIVTSSYDGLCRIWDASTGHCM-KTLIDDENPPVSFVKFSPN------- 211 (321)
Q Consensus 144 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~------- 211 (321)
+++++ ....+..|...|.+++|+|+ +..|++++.|+.|++||++.+... ......+...+..++|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 98764 45566789999999999997 789999999999999999865321 2334456678999999997
Q ss_pred ------CCEEEEEecCCeEEEEeCCCCc----EEEEEeccCCceeEEEeEEEecC---CeEEEEeCCCCeEEEEEcccce
Q 020798 212 ------GKFILVGTLDNTLRLWNYSTGK----ILKTYTGHTNSKYCISSTFSVTN---GKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 212 ------g~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
+++|++++.|+.|++||+++++ .+..+.+|...+.++. | .|+ +.+|++++.|++|++||++...
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~--~-sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA--W-SPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE--E-CCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEE--E-CCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 5799999999999999998765 5667888887765543 3 355 5899999999999999997642
Q ss_pred ---EEEEe--cCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 279 ---VVQKL--EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 279 ---~~~~~--~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
....+ ..|...|.+++|+|++++||+++. |+.|+||+..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~--D~~v~lw~~~ 284 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--DNKVTLWKEN 284 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET--TSCEEEEEEC
T ss_pred CccceeeeecccCCCcEEEEEECCCCCEEEEEcC--CCcEEEEEEC
Confidence 12233 568889999999999999999984 5899999875
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.3e-41 Score=280.54 Aligned_cols=282 Identities=18% Similarity=0.307 Sum_probs=235.2
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
|.++|.+++|+|||++++++..++.+..|... .........+|...|.+++|+|++++|++++ ||.|++||
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~ 78 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIP--------RHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWD 78 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCC--------SEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccC--------CccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEE
Confidence 56789999999999999988877765444221 1112223447999999999999999999998 99999999
Q ss_pred cCCccee---eeee--cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE--EEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 102 VPTATCL---KTLI--GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK--CLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 102 ~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
+.++... ..+. .|...+.+++|+|++++|++++.|+.|++||+++++ ....+..|...+.+++|+|+++.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 158 (337)
T 1gxr_A 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 158 (337)
T ss_dssp TTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred CCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEE
Confidence 9876532 2222 788999999999999999999999999999998876 56677889999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
++.|+.+++||+++++....+. .+...+..++|+|+++++++++.|+.|++||+++++.+..+.. ..... .....
T Consensus 159 ~~~dg~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~v~---~~~~s 233 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF-TSQIF---SLGYC 233 (337)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-SSCEE---EEEEC
T ss_pred EeCCCcEEEEeCCCCceeeeee-cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC-CCceE---EEEEC
Confidence 9999999999999887766653 4566799999999999999999999999999999988877653 33333 33345
Q ss_pred cCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
++++++++++.++.|++||+.+++.. .+..|..+|.+++|+|++++|++++. |+.|++|+.+.
T Consensus 234 ~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~ 296 (337)
T 1gxr_A 234 PTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGK--DNLLNAWRTPY 296 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEET--TSEEEEEETTT
T ss_pred CCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecC--CCcEEEEECCC
Confidence 78999999999999999999887754 57789999999999999999999984 58999999864
No 46
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-41 Score=282.56 Aligned_cols=265 Identities=23% Similarity=0.426 Sum_probs=226.2
Q ss_pred ccccccCC--cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEE
Q 020798 4 DQSLESFR--PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVF 81 (321)
Q Consensus 4 ~~~~~~~~--~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 81 (321)
|..+..|+ +....+.+..|...|.+++|+|+|++|++|+.|+.+++|++...... ........+.+|...|.+++|
T Consensus 85 Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 85 DGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE--NMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC--CSGGGCEEEEECSSCEEEEEE
T ss_pred CCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc--cccccceeeeccCCcEEEEEE
Confidence 34444443 23345667788899999999999999999999999999987542211 112334566789999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECC--CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCC
Q 020798 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNP--QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159 (321)
Q Consensus 82 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 159 (321)
+|+++.|++++.|++|++||+++++++..+.+|...+.+++++| +++.|++|+.|+.|++||+++++++..+..|...
T Consensus 163 ~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~ 242 (354)
T 2pbi_B 163 TNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESD 242 (354)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred eCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC
Confidence 99999999999999999999999999999999999999999987 4689999999999999999999999999999999
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC-CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD-ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
|.+++|+|++..|++++.|++|++||++.++....+... ....+..++|+|+|++|++++.|+.|++||+.+++.+..+
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l 322 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL 322 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEE
Confidence 999999999999999999999999999987665544322 2346789999999999999999999999999999999999
Q ss_pred eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEE
Q 020798 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd 273 (321)
.+|...+.++ ...+++.+|++|+.||.|++|+
T Consensus 323 ~~h~~~v~~l---~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 323 FGHENRVSTL---RVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CCCSSCEEEE---EECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCcEEEE---EECCCCCEEEEEcCCCCEEecC
Confidence 9988775554 3458999999999999999995
No 47
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.3e-41 Score=302.06 Aligned_cols=294 Identities=19% Similarity=0.306 Sum_probs=248.8
Q ss_pred eeeeeccCCccc-EEEEEECC--CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE
Q 020798 14 TLTQTLNGHLRA-ISSVKFSH--DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 14 ~~~~~~~~h~~~-v~~~~~s~--~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~ 90 (321)
...+.+.+|... |++++|+| ++++|++++.|+.|++|++.............+..+..|...|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 566778999999 99999999 999999999999999999853210000012345567789999999999999999999
Q ss_pred EeCC----CcEEEEecCCcceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEEEEEEeCCCC---CeeE
Q 020798 91 ASDD----KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLPAHSD---PVTA 162 (321)
Q Consensus 91 ~~~d----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~---~v~~ 162 (321)
++.+ +.|.+|| .++....+.+|...|.+++|+|++. .+++++.|+.|++||+.+++....+..|.. .|.+
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 9988 6888888 5566778889999999999999997 799999999999999999999999999998 9999
Q ss_pred EEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeecc---CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 020798 163 VDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLID---DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 163 ~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~ 238 (321)
++|+|+ ++.+++++.|+.|++||+++++....+.. .+...+..+.|+ ++++|++++.|+.|++||+.+++.+..+
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 999999 99999999999999999999887777634 667789999999 9999999999999999999999998888
Q ss_pred eccCCc--eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEc
Q 020798 239 TGHTNS--KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 239 ~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw 316 (321)
..+... .......+ +++.++++++.||.|++||+.+++.+..+.+|..+|.+++| |+ |++++ .|+.|++|
T Consensus 291 ~~~~~~~~~~~~~~~~--~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~--~dg~i~~w 362 (615)
T 1pgu_A 291 TLDKQQLGNQQVGVVA--TGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGS--YDGRIMEW 362 (615)
T ss_dssp ECCTTCGGGCEEEEEE--EETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEE--TTSCEEET
T ss_pred cCCCCcccCceeEEEe--CCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEEC--CCCeEEEE
Confidence 765211 11222222 37889999999999999999999999999999999999999 87 67766 34678888
Q ss_pred cc
Q 020798 317 TQ 318 (321)
Q Consensus 317 ~~ 318 (321)
+.
T Consensus 363 ~~ 364 (615)
T 1pgu_A 363 SS 364 (615)
T ss_dssp TT
T ss_pred Ec
Confidence 75
No 48
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-40 Score=322.32 Aligned_cols=289 Identities=26% Similarity=0.455 Sum_probs=255.1
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
..+.+|.+.|++++|+|+|++|++|+.|+.|++|++.. ...+..+.+|...|.+++|+|++++|++++.|+.
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~--------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 680 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET--------GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKK 680 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC--------CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCe
Confidence 45679999999999999999999999999999998754 2356678899999999999999999999999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECC--CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNP--QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
|++||+.+++.+..+.+|...+.+++|+| ++..+++++.|+.|++||++++++...+..|...|.+++|+|+++.+++
T Consensus 681 v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred EEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEE
Confidence 99999999999999999999999999999 4568999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeccC------------CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe-cc
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDD------------ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT-GH 241 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~ 241 (321)
++.||.|++||++++.....+... ....+.+++|+|+|+.+++++ ++.+.+||+.++..+..+. +|
T Consensus 761 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 761 CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSS
T ss_pred EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCC
Confidence 999999999999887665443211 122567889999999998876 7899999999998887775 55
Q ss_pred CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.....++ ...+++.++++++.||.|++||+.++..+..+.+|..+|.+++|+|++++|++++. |+.|++|+.+
T Consensus 840 ~~~v~~~---~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~--dg~v~vw~~~ 912 (1249)
T 3sfz_A 840 HSTIQYC---DFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASD--DQTIRVWETK 912 (1249)
T ss_dssp SSCCCEE---EECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEEHH
T ss_pred CCceEEE---EEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeC--CCeEEEEEcc
Confidence 5554433 34578999999999999999999999999999999999999999999999999984 5899999964
No 49
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=280.55 Aligned_cols=248 Identities=17% Similarity=0.225 Sum_probs=202.5
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
|..+|.+++|+|++ .|++|+.||.|++||+..... .......+.+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~----~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENET----LIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWD 155 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSS----CEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCc----eeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 55689999999985 678999999999999864221 0111223458999999999999999999999999999999
Q ss_pred cCCcceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEEEEEEe--CCCCCeeEEEEccC-CCEEEEEeC
Q 020798 102 VPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDFNRD-GTMIVTSSY 177 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~ 177 (321)
+.+++++..+.+|...|.+++|+|++. .|++++.|+.|++||+++++....+. .+...+.+++|+|+ +.++++++.
T Consensus 156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred CCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 999999999999999999999999874 78999999999999999988776653 45567899999995 568889999
Q ss_pred CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC-CEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC
Q 020798 178 DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG-KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 178 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
|+.|++||+++++++..+. .+...|..++|+|++ ++|++++.|+.|++||+.+++++ .+.+|...+.++. |. ++
T Consensus 236 dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~--~s-p~ 310 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDAT--WS-PL 310 (344)
T ss_dssp TSEEEEEESCC--CCEEEE-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEE--EC-SS
T ss_pred CCcEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEE--Ee-CC
Confidence 9999999999988777654 466789999999998 57889999999999999988765 4678877765443 33 55
Q ss_pred C-eEEEEeCCCCeEEEEEcccceE
Q 020798 257 G-KYIVSGSEDSCVYLWELQSRKV 279 (321)
Q Consensus 257 ~-~~l~~~~~dg~i~vwd~~~~~~ 279 (321)
+ .+|++|+.||+|++|++.+...
T Consensus 311 ~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 311 NHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp STTEEEEEETTSCEEEEECCC---
T ss_pred CCeEEEEEcCCCeEEEEECCCCCC
Confidence 5 5778999999999999976543
No 50
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.3e-41 Score=283.08 Aligned_cols=283 Identities=14% Similarity=0.155 Sum_probs=237.7
Q ss_pred eeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC-EEEEEeCC
Q 020798 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR-FLVSASDD 94 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~~~~~d 94 (321)
.....+|.+.|++++|+|++++|++++.|+.|++|++.... ...+...+.+|...|.+++|+|+++ +|++++.|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 78 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA-----KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT-----TEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCC-----ccccceeeeecCCceEEEEECCCCCcEEEEEcCC
Confidence 34456899999999999999999999999999999986421 1112345568999999999999999 99999999
Q ss_pred CcEEEEec-CCcceeeeeec--CcccEEEEEECCCCCEEEEeeCCCcEEEEecCC---------CEEEEEEeCCCCCeeE
Q 020798 95 KTIRLWDV-PTATCLKTLIG--HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT---------GKCLKVLPAHSDPVTA 162 (321)
Q Consensus 95 ~~i~iwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~---------~~~~~~~~~~~~~v~~ 162 (321)
|.|++||+ .+++. ..+.+ |...|.+++|+| ++.|++++.|+.|++||+++ ++++..+. |...+.+
T Consensus 79 g~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~ 155 (342)
T 1yfq_A 79 GEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFT 155 (342)
T ss_dssp SCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEE
T ss_pred CeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEE
Confidence 99999999 77764 66778 999999999999 99999999999999999987 55555555 8889999
Q ss_pred EEEccCCCEEEEEeCCCeEEEEeCCC-Cce-eeeeccCCCCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCC------c
Q 020798 163 VDFNRDGTMIVTSSYDGLCRIWDAST-GHC-MKTLIDDENPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTG------K 233 (321)
Q Consensus 163 ~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~-~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~------~ 233 (321)
++|+|++ +++++.++.|++||+++ +.. .......+...+..++|+| +++++++++.|+.|++|++... +
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 9999887 89999999999999987 543 2333345566799999999 9999999999999999999876 7
Q ss_pred EEEEEeccCCc------eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCC-CCCeEEEEecCCCceEEEEe
Q 020798 234 ILKTYTGHTNS------KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH-TDPVISVASHPTENIIASGA 306 (321)
Q Consensus 234 ~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~~ 306 (321)
.+..+..|... ...+......+++++|++++.||.|++||+.+++.+..+.+| ..+|.+++ |++++|++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLAT 311 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEE
T ss_pred cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEe
Confidence 77778776540 112333344578999999999999999999999999999998 99999999 9999999999
Q ss_pred ecCCcc
Q 020798 307 LDNDRT 312 (321)
Q Consensus 307 ~d~~~~ 312 (321)
.| +.
T Consensus 312 ~D--g~ 315 (342)
T 1yfq_A 312 SD--DT 315 (342)
T ss_dssp EC--TH
T ss_pred cC--Cc
Confidence 66 55
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.2e-40 Score=272.96 Aligned_cols=251 Identities=35% Similarity=0.609 Sum_probs=219.6
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
....+.+|...|.+++|+|++++|++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 34567899999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeE
Q 020798 145 KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTL 224 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i 224 (321)
++++.+..+..|...|.+++|+|+++.+++++.|+.|++||+++++....+. .+...+..++|+|+++++++++.|+.|
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-CCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 9999999999999999999999999999999999999999999888766653 456679999999999999999999999
Q ss_pred EEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEE---EEecCCCce
Q 020798 225 RLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS---VASHPTENI 301 (321)
Q Consensus 225 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~---~~~~p~~~~ 301 (321)
++||+++++.+..+...... .+......+++++|++++.||.|++||+++++.+..+.+|...+.. ....+++.+
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp EEEETTTCCEEEEECCSSCC--CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred EEEECCCCceeeEEeccCCC--ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 99999999888777543322 2333445688999999999999999999999999999888765433 333467889
Q ss_pred EEEEeecCCccEEEccccc
Q 020798 302 IASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 302 l~s~~~d~~~~i~iw~~~~ 320 (321)
|++|+ .|+.|++||.+.
T Consensus 252 l~sg~--~dg~i~vwd~~~ 268 (312)
T 4ery_A 252 IVSGS--EDNLVYIWNLQT 268 (312)
T ss_dssp EEECC--TTSCEEEEETTT
T ss_pred EEEEC--CCCEEEEEECCC
Confidence 99998 458999999864
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.5e-41 Score=288.19 Aligned_cols=281 Identities=19% Similarity=0.270 Sum_probs=232.0
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
.+++++|+|+|++|++++.|+.+++|++..... ...+..| ..+....|++++++|++++.|+.|++||+.+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 128 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDG--------SKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF 128 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEET--------TTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccce--------eeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC
Confidence 345789999999999999999999998764321 2233344 4455567899999999999999999999999
Q ss_pred cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEE
Q 020798 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184 (321)
Q Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 184 (321)
++....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|+++.|++++.|+.|++|
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 98877778999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred eCCCCceeeeeccC--CCC---------------------CeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec-
Q 020798 185 DASTGHCMKTLIDD--ENP---------------------PVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG- 240 (321)
Q Consensus 185 d~~~~~~~~~~~~~--~~~---------------------~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~- 240 (321)
|+++++....+... +.. .+..++|+|++++|++++.|+.|++||+++++.+..+..
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc
Confidence 99988877665431 222 333455678999999999999999999999988777754
Q ss_pred cCCceeEEEeEEEecCCe-EEEEeCCCCeEEEEEcccce-EEEEecC-CCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 241 HTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRK-VVQKLEG-HTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~-~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
|.....++ ...+++. +|++|+.||.|++||+++++ .+..+.+ |..+|.++.+ |++.+|++++ .|+.|++|+
T Consensus 289 ~~~~v~~~---~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~--~d~~v~iw~ 362 (420)
T 3vl1_A 289 FTCSCNSL---TVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSG--FDTSIKLDI 362 (420)
T ss_dssp TSSCEEEE---EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEET--TTEEEEEEE
T ss_pred cCCCceeE---EEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEec--CCccEEEEe
Confidence 44444333 3346777 99999999999999999874 3666666 6677888855 5788999998 458999999
Q ss_pred ccc
Q 020798 318 QEK 320 (321)
Q Consensus 318 ~~~ 320 (321)
++.
T Consensus 363 ~~~ 365 (420)
T 3vl1_A 363 ISD 365 (420)
T ss_dssp ECC
T ss_pred ccC
Confidence 754
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.4e-40 Score=282.20 Aligned_cols=282 Identities=22% Similarity=0.402 Sum_probs=232.8
Q ss_pred cCCccc--EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccc-cccccEEEEEECCCCCEEEEEeCCCc
Q 020798 20 NGHLRA--ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT-GHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 20 ~~h~~~--v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
.+|... +.+++|++ ..+++++.|+.|++|++... .....+. .|...|.+++|+|++++|++|+.||.
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~--------~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~ 157 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSG--------SVSALAETDESTYVASVKWSHDGSFLSVGLGNGL 157 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTC--------CEEEEEECCTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCC--------cEeEeeecCCCCCEEEEEECCCCCEEEEECCCCe
Confidence 466655 44466664 56788889999999987542 1222333 37889999999999999999999999
Q ss_pred EEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC-CCEEEEEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 97 IRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK-TGKCLKVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
|++||+.+++.+..+.+|...+.+++|+ ++.|++++.||.|++||++ .......+..|...|.+++|+|++..|+++
T Consensus 158 i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 158 VDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEE
Confidence 9999999999889999999999999994 5799999999999999998 566777888999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-EEEEEe--cCCeEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-FILVGT--LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
+.|+.|++||+++++....+. .+...+..++|+|++. ++++++ .|+.|++||+.+++.+..+..+ .. +....
T Consensus 236 ~~d~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~---v~~~~ 310 (401)
T 4aez_A 236 GNDNVVQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-SQ---VTSLI 310 (401)
T ss_dssp ETTSCEEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-SC---EEEEE
T ss_pred eCCCeEEEccCCCCCccEEec-CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-Cc---EEEEE
Confidence 999999999999887766553 4566789999999765 455544 6999999999999988888643 33 33344
Q ss_pred EecCCeEEEE--eCCCCeEEEEEcccceEE--EEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 253 SVTNGKYIVS--GSEDSCVYLWELQSRKVV--QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 253 ~~~~~~~l~~--~~~dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..+++.++++ |+.||.|++||+.+++.. ..+.+|..+|.+++|+|++.+|++++ .|+.|++|+.+.
T Consensus 311 ~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~--~dg~i~iw~~~~ 380 (401)
T 4aez_A 311 WSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA--SDENLKFWRVYD 380 (401)
T ss_dssp ECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC--TTSEEEEEECCC
T ss_pred ECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEECCC
Confidence 4578888888 668999999999986544 44678999999999999999999998 458999999864
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.9e-40 Score=283.50 Aligned_cols=278 Identities=24% Similarity=0.430 Sum_probs=228.3
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA 105 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 105 (321)
++.|+||++ ++||+|. |+.|++|+..... ...+..+.+|...|++++|+|+|++|++|+.||.|++||+.++
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~------~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGD------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 179 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCC------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCC------EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC
Confidence 567999975 5787775 9999999875421 1122344578889999999999999999999999999999999
Q ss_pred ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEE
Q 020798 106 TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184 (321)
Q Consensus 106 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 184 (321)
+.+..+.+|...+.++.++ +..|++++.|+.+++||.... ..+..+..|...+..+.++|++..+++++.|+.+++|
T Consensus 180 ~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 9999999999999988775 679999999999999998764 4566788999999999999999999999999999999
Q ss_pred eCCCCcee---eeeccCCCCCeEEEEEccCCC-EEEEE--ecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe
Q 020798 185 DASTGHCM---KTLIDDENPPVSFVKFSPNGK-FILVG--TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258 (321)
Q Consensus 185 d~~~~~~~---~~~~~~~~~~~~~~~~~~~g~-~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (321)
|..+++.. ......+...+..++|+|.+. .++++ +.|+.|++||+.+++.+..+..+.. . ....+. +++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~-v--~~~~~~-~~~~ 333 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-V--CSILWS-PHYK 333 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC-E--EEEEEE-TTTT
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc-e--eeeeec-CCCC
Confidence 99876432 122345566799999999654 44443 4799999999999999888876543 2 233344 5566
Q ss_pred EEEEe--CCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 259 YIVSG--SEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 259 ~l~~~--~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.++++ +.|+.|+|||+.+++++..+.+|.++|++++|+|++.+|||||. |++|+|||+.
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~--D~tvriWdv~ 394 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAA--DETLRLWRCF 394 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEET--TTEEEEECCS
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEec--CCeEEEEECC
Confidence 55543 47999999999999999999999999999999999999999994 5899999974
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.9e-41 Score=281.09 Aligned_cols=297 Identities=16% Similarity=0.245 Sum_probs=222.9
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--CCCEEEEEe
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--DSRFLVSAS 92 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--~~~~l~~~~ 92 (321)
+.+.+.+|.+.|++++|+|++++|++|+.|+.|++|++.... ........+.+|...|.+++|+| ++++|++++
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT----SNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS----CCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC----CcceecceeccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 345678999999999999999999999999999999986421 11234556778999999999999 699999999
Q ss_pred CCCcEEEEecCCc---------ceeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCCEEEEEEe-------
Q 020798 93 DDKTIRLWDVPTA---------TCLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTGKCLKVLP------- 154 (321)
Q Consensus 93 ~d~~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~~~~~------- 154 (321)
.|+.|++||+.++ +....+..|...+.+++|+|+ +++|++++.|+.|++||+++++.+..+.
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 9999999999876 446677889999999999999 9999999999999999998765433221
Q ss_pred ------CCCCCeeEEEEccC---CCEEEEEeCCCeEEEEeCCCCcee-eeeccCCCCCeEEEEEccCC----CEEEEEec
Q 020798 155 ------AHSDPVTAVDFNRD---GTMIVTSSYDGLCRIWDASTGHCM-KTLIDDENPPVSFVKFSPNG----KFILVGTL 220 (321)
Q Consensus 155 ------~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~g----~~l~~~~~ 220 (321)
.|...+.+++|+|+ +..+++++.++.+.+|+...+... ......+...+..++|+|++ ++|++++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 56778999999997 889999999999988887766542 22334567789999999998 89999999
Q ss_pred CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEE----EEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEec
Q 020798 221 DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYI----VSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296 (321)
Q Consensus 221 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 296 (321)
|+.|++||++.+............. ...........+ ..+.....+.+|+....+.+..+.+|..+|++++|+
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 315 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEESLTNS---NMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWN 315 (351)
T ss_dssp TSCEEEEEEEECC------------------------------------------CCSEEEEEEEEECTTSSCEEEEEEC
T ss_pred CCeEEEEeCCCCcCccccCCcccce---eccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEc
Confidence 9999999998765433322211111 111111122222 233345566777777778889999999999999999
Q ss_pred CCCceEEEEeecCCccEEEccccc
Q 020798 297 PTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 297 p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
|++++|++|+ .|+.|++|+.+.
T Consensus 316 ~~~~~l~s~~--~dg~v~iw~~~~ 337 (351)
T 3f3f_A 316 LTGTILSSAG--DDGKVRLWKATY 337 (351)
T ss_dssp SSSCCEEEEE--TTSCEEEEEECT
T ss_pred CCCCEEEEec--CCCcEEEEecCc
Confidence 9999999998 458999999864
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.9e-40 Score=286.41 Aligned_cols=283 Identities=25% Similarity=0.506 Sum_probs=241.7
Q ss_pred eeeeccCCcccE-EEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 15 LTQTLNGHLRAI-SSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 15 ~~~~~~~h~~~v-~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
....+.+|...| .++.+ ++++|++|+.|+.|++|++.. ...+..+.+|...|.+++|+|++ +|++|+.
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~--------~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~ 181 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN--------KKFLLQLSGHDGGVWALKYAHGG-ILVSGST 181 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT--------TEEEEEECCCSSCEEEEEECSTT-EEEEEET
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC--------CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC
Confidence 456788998885 66655 578999999999999998753 23566788999999999999988 8999999
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEEC--CCCCEEEEeeCCCcEEEEecCCCEE----------------------
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFN--PQSNMIVSGAFDETVRIWDVKTGKC---------------------- 149 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~~wd~~~~~~---------------------- 149 (321)
||.|++||+.+++....+.+|...|.+++++ +++.++++++.|+.|++||++++..
T Consensus 182 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTT
T ss_pred CCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeE
Confidence 9999999999999999999999999999998 5778999999999999999987642
Q ss_pred -EEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 150 -LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 150 -~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
...+..|...+.++ +++++.+++++.|+.|++||+++++.+..+. .+...+..++|+|+++++++++.|+.|++||
T Consensus 262 ~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 262 FVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERKRCISASMDTTIRIWD 338 (464)
T ss_dssp EEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred EEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 34566777777766 5778999999999999999999988776653 4567799999999999999999999999999
Q ss_pred CCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeec
Q 020798 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d 308 (321)
+++++.+..+.+|...+.++.. ++.+|++|+.||.|++||+.+++...... |...+..++|+|++++|++|+
T Consensus 339 ~~~~~~~~~~~~h~~~v~~~~~-----~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-- 410 (464)
T 3v7d_B 339 LENGELMYTLQGHTALVGLLRL-----SDKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-- 410 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEE-----CSSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE--
T ss_pred CCCCcEEEEEeCCCCcEEEEEE-----cCCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec--
Confidence 9999999999988877655432 36899999999999999999887665543 566788899999999999987
Q ss_pred CCccEEEccccc
Q 020798 309 NDRTVKIWTQEK 320 (321)
Q Consensus 309 ~~~~i~iw~~~~ 320 (321)
|+.|++||.+.
T Consensus 411 -dg~i~iwd~~~ 421 (464)
T 3v7d_B 411 -ENQFNIYNLRS 421 (464)
T ss_dssp -TTEEEEEETTT
T ss_pred -CCeEEEEECCC
Confidence 47999999864
No 57
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-40 Score=277.64 Aligned_cols=259 Identities=26% Similarity=0.450 Sum_probs=198.6
Q ss_pred eeeeec-cC-CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEE
Q 020798 14 TLTQTL-NG-HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSA 91 (321)
Q Consensus 14 ~~~~~~-~~-h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~ 91 (321)
++...+ .+ |...|.+++|+|++++|++|+.|+.|++|++..... .......+..+.+|...|.+++|+|++++|++|
T Consensus 47 ~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~-~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~ 125 (330)
T 2hes_X 47 TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESAD-RTFEMDLLAIIEGHENEVKGVAWSNDGYYLATC 125 (330)
T ss_dssp EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--------CCCEEEEEEC----CEEEEEECTTSCEEEEE
T ss_pred EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcC-ccccceeEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 344445 44 999999999999999999999999999998753211 011223456678999999999999999999999
Q ss_pred eCCCcEEEEecCCc----ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC--EEEEEEeCCCCCeeEEEE
Q 020798 92 SDDKTIRLWDVPTA----TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG--KCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 92 ~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~--~~~~~~~~~~~~v~~~~~ 165 (321)
+.|+.|++||+... +++..+.+|...|.+++|+|++++|++++.|++|++||..++ +++..+..|...|.+++|
T Consensus 126 s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~ 205 (330)
T 2hes_X 126 SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDF 205 (330)
T ss_dssp ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEe
Confidence 99999999999432 456677899999999999999999999999999999998876 567788899999999999
Q ss_pred ccC--CCEEEEEeCCCeEEEEeCCCC--------ceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc--
Q 020798 166 NRD--GTMIVTSSYDGLCRIWDASTG--------HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK-- 233 (321)
Q Consensus 166 ~~~--~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~-- 233 (321)
+|+ +..+++++.|++|++||++.+ .+...+...+...+..++|++++ +|++++.|+.|++||..+++
T Consensus 206 ~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~ 284 (330)
T 2hes_X 206 DKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWK 284 (330)
T ss_dssp CCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEE
T ss_pred cCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceE
Confidence 998 668999999999999998654 22223323366789999999765 78899999999999988764
Q ss_pred EEEEE-eccCC-ceeEEEeEEEec-CCeEEEEeCCCCeEEEEEccc
Q 020798 234 ILKTY-TGHTN-SKYCISSTFSVT-NGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 234 ~~~~~-~~~~~-~~~~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~ 276 (321)
.+... .+|.. .+.++ .+.+. ++.+|++|+.||.|++||++.
T Consensus 285 ~~~~~~~~h~~~~v~~v--~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 285 VFAKRALCHGVYEINVV--KWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEESCTTTTSCEEEE--EEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEeccccccccceEEEE--EEecCCCceEEEEecCCCcEEEEEecc
Confidence 23333 44544 44333 23322 688999999999999999864
No 58
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.7e-41 Score=286.04 Aligned_cols=271 Identities=27% Similarity=0.485 Sum_probs=225.1
Q ss_pred ccccccCCc--ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEE
Q 020798 4 DQSLESFRP--YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVF 81 (321)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 81 (321)
|..++-|+. .+....+.+|...|.+++|+|+|++|++|+.|+.+++|++....... ........+.+|.+.|.++.|
T Consensus 87 D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~gh~~~v~~~~~ 165 (380)
T 3iz6_a 87 DGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD-GNMPVSRVLTGHKGYASSCQY 165 (380)
T ss_dssp TSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC-CSSTTCCBCCCCSSCCCCCBC
T ss_pred CCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc-CCccceeeccCCCcceEEEEE
Confidence 445555543 34567788999999999999999999999999999999986533211 122334567899999999999
Q ss_pred CCCC-CEEEEEeCCCcEEEEecCCcceeeee-----ecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecC-CCEEEEEE
Q 020798 82 SSDS-RFLVSASDDKTIRLWDVPTATCLKTL-----IGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVK-TGKCLKVL 153 (321)
Q Consensus 82 ~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~-~~~~~~~~ 153 (321)
+|++ ..|++|+.|++|++||+.+++.+..+ .+|...+.+++++| ++++|++|+.|+.|++||++ .++.+..+
T Consensus 166 ~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~ 245 (380)
T 3iz6_a 166 VPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY 245 (380)
T ss_dssp CSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE
T ss_pred ecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE
Confidence 9974 57999999999999999999877665 67899999999987 78899999999999999998 45677788
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCC------CCCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE------NPPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
..|...|.+++|+|++..|++++.|++|++||+++++....+.... ...+..++|+|+|++|++|+.|+.|++|
T Consensus 246 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw 325 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW 325 (380)
T ss_dssp CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence 8999999999999999999999999999999999987766543221 2347899999999999999999999999
Q ss_pred eCCCCcEEEEE----eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce
Q 020798 228 NYSTGKILKTY----TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 228 d~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
|+.+++.+..+ .+|...+.++. ..+++.+|++|+.||.|++|++...+
T Consensus 326 d~~~~~~~~~~~~~~~~h~~~v~~l~---~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 326 DTLLAEMVLNLGTLQNSHEGRISCLG---LSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ETTTCCEEEEECCSCSSCCCCCCEEE---ECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCceEEEEecccCCCCCceEEEE---ECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99998888777 45666655543 35789999999999999999987543
No 59
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=276.08 Aligned_cols=250 Identities=21% Similarity=0.426 Sum_probs=210.2
Q ss_pred cccccccccc-cEEEEEECCCCCEEEEEeCCCcEEEEecCCcceee---eeecCcccEEEEEECCCCCEEEEeeCCCcEE
Q 020798 65 PLQKFTGHEQ-GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK---TLIGHTNYVFCVNFNPQSNMIVSGAFDETVR 140 (321)
Q Consensus 65 ~~~~~~~h~~-~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 140 (321)
.+..+.+|.. .|..++|+|+|++|++|+.|+.|++||+.++.... ...+|...|.+++|+|++++|++++.|+.++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 3456778887 89999999999999999999999999998775332 2358999999999999999999999999999
Q ss_pred EEecCCC--EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCcee--eeeccCCCCCeEEEEEccCCCEEE
Q 020798 141 IWDVKTG--KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM--KTLIDDENPPVSFVKFSPNGKFIL 216 (321)
Q Consensus 141 ~wd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~l~ 216 (321)
+||+..+ +++..+..|..+|.+++|+|++++|++++.|++|++||++.+... ......+...+..++|+|++++|+
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence 9998876 456778899999999999999999999999999999999865432 233445677899999999999999
Q ss_pred EEecCCeEEEEeCCCCc--EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc---------------eE
Q 020798 217 VGTLDNTLRLWNYSTGK--ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR---------------KV 279 (321)
Q Consensus 217 ~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---------------~~ 279 (321)
+++.|+.|++||..+++ ....+.+|...+.++ .+.+++++|++|+.|++|++||.... +.
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l---~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEGHESTVWSL---AFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE---EECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecCCCCceEEE---EECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 99999999999998775 346777887765544 33578999999999999999997422 23
Q ss_pred EEEecC-CCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 280 VQKLEG-HTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 280 ~~~~~~-h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+..+.+ |...|.+++|+|++..|++++. |+.|++|+.+
T Consensus 244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~--d~~i~vw~~~ 282 (345)
T 3fm0_A 244 ICTLSGFHSRTIYDIAWCQLTGALATACG--DDAIRVFQED 282 (345)
T ss_dssp EEEECSSCSSCEEEEEECTTTCCEEEEET--TSCEEEEEEC
T ss_pred eEEecCCCCCcEEEEEEecCCCEEEEEeC--CCeEEEEEeC
Confidence 445555 8889999999999999999984 5899999864
No 60
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.9e-40 Score=283.65 Aligned_cols=274 Identities=29% Similarity=0.534 Sum_probs=236.8
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIR 98 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~ 98 (321)
..+|...|++++| ++++|++|+.|+.|++|++.. ......+.+|...|.+++| ++++|++|+.||.|+
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~--------~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~ 196 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT--------LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR 196 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS--------CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC--------CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEE
Confidence 3467788998887 799999999999999998753 2345677899999999999 788999999999999
Q ss_pred EEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEE---EEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 99 LWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL---KVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 99 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
+||+.+++.+..+.+|...|.++++++ +.+++++.||.|++||+++++.. ..+..|...|.+++| +++.++++
T Consensus 197 vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~ 272 (435)
T 1p22_A 197 VWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSA 272 (435)
T ss_dssp EEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEE
T ss_pred EEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEE
Confidence 999999999999999999999999974 59999999999999999877544 567789999999998 67899999
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEec
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT 255 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
+.||.|++||+++++.+..+. .+...+.++.+ +++++++++.|+.|++||+++++.+..+.+|...+.++..
T Consensus 273 ~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~----- 344 (435)
T 1p22_A 273 SGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----- 344 (435)
T ss_dssp ETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-----
T ss_pred eCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-----
Confidence 999999999999988777664 45567888877 5679999999999999999999999999988877665542
Q ss_pred CCeEEEEeCCCCeEEEEEcccce---------EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 256 NGKYIVSGSEDSCVYLWELQSRK---------VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~---------~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
++.+|++|+.||.|++||+.+++ .+..+.+|..+|.+++| ++.+|++|+ .||.|++||++.
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s--~Dg~i~iwd~~~ 414 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS--HDDTILIWDFLN 414 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECC--SSSEEEEEC---
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEe--CCCEEEEEECCC
Confidence 68899999999999999998776 78889999999999999 688999998 458999999854
No 61
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.4e-39 Score=269.78 Aligned_cols=245 Identities=27% Similarity=0.498 Sum_probs=214.0
Q ss_pred ccccccccccEEEEEECCCC-CEEEEEeCCCcEEEEecCCc-----ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcE
Q 020798 66 LQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTA-----TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETV 139 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 139 (321)
...+.+|.+.|.+++|+|++ ++|++|+.|++|++|++... .++..+.+|...|.+++|+|++++|++++.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 34678999999999999965 89999999999999998642 3456788999999999999999999999999999
Q ss_pred EEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccC------CC
Q 020798 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPN------GK 213 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~------g~ 213 (321)
++||+++++....+..|...|.+++|+|++..+++++.|++|++||++.. +...+ ..+...+..+.+.|. +.
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~-~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATL-LGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEE-CCCSSCEEEEEECCC------CC
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEE-eccCCcEEEEEEccCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999753 44443 345667899999985 44
Q ss_pred EEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEE
Q 020798 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV 293 (321)
Q Consensus 214 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 293 (321)
.+++++.|+.|++||+++.+....+.+|...+.++. ..+++++|++|+.||.|++||+.+++.+..+..+ .+|.++
T Consensus 168 ~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~---~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~ 243 (319)
T 3frx_A 168 TIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLT---ASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSL 243 (319)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEE---ECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEE
T ss_pred EEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEE---EcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEE
Confidence 899999999999999999999999988887765543 3578999999999999999999999988888754 689999
Q ss_pred EecCCCceEEEEeecCCccEEEcccc
Q 020798 294 ASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 294 ~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+|+|++.+|++++. ..|++|+.+
T Consensus 244 ~~sp~~~~la~~~~---~~i~v~~~~ 266 (319)
T 3frx_A 244 AFSPNRYWLAAATA---TGIKVFSLD 266 (319)
T ss_dssp EECSSSSEEEEEET---TEEEEEEET
T ss_pred EEcCCCCEEEEEcC---CCcEEEEeC
Confidence 99999999998862 359999875
No 62
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.2e-41 Score=283.17 Aligned_cols=275 Identities=18% Similarity=0.228 Sum_probs=196.8
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC------CCcEEEEec
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD------DKTIRLWDV 102 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~------d~~i~iwd~ 102 (321)
+.+.+++.++.+. .+.....|++. ......|+..|.+++|+|||++|++|+. |+.|++|+.
T Consensus 11 ~d~g~~~~~~~~~-g~~~~~~w~~p------------~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~ 77 (357)
T 4g56_B 11 VDLGTENLYFQSN-GSSKGSAWGRP------------VTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKD 77 (357)
T ss_dssp ------------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESS
T ss_pred CCCCccceEEecC-CCccccccCCC------------CCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEEC
Confidence 3556666555443 35566777542 1223469999999999999999999997 778999998
Q ss_pred CCcce----eeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE----EEeCCCCCeeEEEEccCCCEEEE
Q 020798 103 PTATC----LKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK----VLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 103 ~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
.++.. .....+|...|.+++|+|++. +++++.||.|++||+.+++... ....|...|++++|+|++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s 156 (357)
T 4g56_B 78 PEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVS 156 (357)
T ss_dssp CC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEE
T ss_pred CCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEE
Confidence 76543 233456888999999999875 5667889999999998876443 23478999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-EEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEE
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-FILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFS 253 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (321)
++.|+.|++||+++++.+..+ ..+...+..++|+|++. ++++++.|+.|++||+++++.+..+..+..........+.
T Consensus 157 gs~dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s 235 (357)
T 4g56_B 157 GGKDFSVKVWDLSQKAVLKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWH 235 (357)
T ss_dssp EETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC
T ss_pred EeCCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhh
Confidence 999999999999998877665 35667899999999875 7888999999999999998876655443322222333455
Q ss_pred ecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCC-ceEEEEeecCCccEEEccccc
Q 020798 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE-NIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+.++.+|++|+.|+.|++||+++++.+..+.+|..+|++++|+|++ ++||+|+. |++|+|||.+.
T Consensus 236 p~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~--D~~i~iwd~~~ 301 (357)
T 4g56_B 236 PEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISE--DCTVAVLDADF 301 (357)
T ss_dssp TTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEET--TSCEEEECTTS
T ss_pred hcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeC--CCEEEEEECCC
Confidence 4456789999999999999999999999999999999999999997 57899984 58999999864
No 63
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.1e-40 Score=268.95 Aligned_cols=251 Identities=19% Similarity=0.297 Sum_probs=205.0
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC--CCEEEEEeCC
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD--SRFLVSASDD 94 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~--~~~l~~~~~d 94 (321)
..+.+|.+.|++++|+|+|++||+|+.|+.|++|++... ....+..+.+|.+.|.+++|+++ +++|++|+.|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~------~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D 76 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 76 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS------CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC------CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC
Confidence 457899999999999999999999999999999997531 12346678899999999999864 8999999999
Q ss_pred CcEEEEecCCcc--eeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCCE--EEEEEeCCCCCeeEEEEccC
Q 020798 95 KTIRLWDVPTAT--CLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTGK--CLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 95 ~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~ 168 (321)
++|++||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+..|...|.+++|+|+
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 999999998764 45567789999999999997 7899999999999999998653 23456789999999999997
Q ss_pred -------------CCEEEEEeCCCeEEEEeCCCCce---eeeeccCCCCCeEEEEEccCC---CEEEEEecCCeEEEEeC
Q 020798 169 -------------GTMIVTSSYDGLCRIWDASTGHC---MKTLIDDENPPVSFVKFSPNG---KFILVGTLDNTLRLWNY 229 (321)
Q Consensus 169 -------------~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~g---~~l~~~~~d~~i~i~d~ 229 (321)
++.|++++.|++|++||++++.. ....+..|...|..++|+|++ ++|++++.|+.|++||+
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 46899999999999999976541 222334577789999999984 89999999999999998
Q ss_pred CCCc--E-EEEE--eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 230 STGK--I-LKTY--TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 230 ~~~~--~-~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
.+.. . ...+ ..+...+. ...+.+++++|++++.||.|++|+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~---~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 237 DNEQGPWKKTLLKEEKFPDVLW---RASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSTTSCCEEEESSSSCCSSCEE---EEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCCccceeeeecccCCCcEE---EEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 7643 1 2222 23333333 333457899999999999999999863
No 64
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.7e-39 Score=292.19 Aligned_cols=293 Identities=20% Similarity=0.348 Sum_probs=235.4
Q ss_pred cceeeeeccCCcc---cEEEEEECCC-CCEEEEecCCceEEEeeccccCCCCCCCCCccccc-c---cccccEEEEEECC
Q 020798 12 PYTLTQTLNGHLR---AISSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKF-T---GHEQGVSDLVFSS 83 (321)
Q Consensus 12 ~~~~~~~~~~h~~---~v~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~-~---~h~~~i~~~~~~~ 83 (321)
+.+....+.+|.. .|++++|+|+ +++|++++.|+.+++|++.. ...+..+ . .|...|.+++|+
T Consensus 192 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~--------~~~~~~~~~~~~~~~~~v~~~~~~- 262 (615)
T 1pgu_A 192 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS--------GEFLKYIEDDQEPVQGGIFALSWL- 262 (615)
T ss_dssp TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT--------CCEEEECCBTTBCCCSCEEEEEES-
T ss_pred CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCC--------CCEeEEecccccccCCceEEEEEc-
Confidence 3456677889999 9999999999 99999999999999998753 2334455 4 799999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCcceeeeeecC----cccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCC
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGH----TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 159 (321)
++++|++++.|+.|++||+.+++....+..+ ...+.++.+. +++.+++++.|+.|++||+.+++.+..+..|..+
T Consensus 263 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 341 (615)
T 1pgu_A 263 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKG 341 (615)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSC
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCC
Confidence 9999999999999999999999888777766 3667788875 8899999999999999999888777777666665
Q ss_pred eeEEEEccC---------------------------------CCEEEEEeC-----------------------------
Q 020798 160 VTAVDFNRD---------------------------------GTMIVTSSY----------------------------- 177 (321)
Q Consensus 160 v~~~~~~~~---------------------------------~~~l~~~~~----------------------------- 177 (321)
|.+++| |+ +..+++++.
T Consensus 342 v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 420 (615)
T 1pgu_A 342 ITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFT 420 (615)
T ss_dssp EEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEE
T ss_pred EEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCE
Confidence 555555 33 334444444
Q ss_pred ---------------------------------------------CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC
Q 020798 178 ---------------------------------------------DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG 212 (321)
Q Consensus 178 ---------------------------------------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g 212 (321)
++.+++||+.+++........+...+..++|+|++
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 500 (615)
T 1pgu_A 421 AVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE 500 (615)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS
T ss_pred EEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCC
Confidence 44444444444332212233456679999999999
Q ss_pred CEEEEEecCCeEEEEeCCCCcEEEEEec-cCCceeEEEeEEEec----------CCeEEEEeCCCCeEEEEEcccc-eEE
Q 020798 213 KFILVGTLDNTLRLWNYSTGKILKTYTG-HTNSKYCISSTFSVT----------NGKYIVSGSEDSCVYLWELQSR-KVV 280 (321)
Q Consensus 213 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~l~~~~~dg~i~vwd~~~~-~~~ 280 (321)
++|++++.|+.|++||+.+++.+..+.+ |...+.++ ...+ ++++|++++.||.|++||+.++ +.+
T Consensus 501 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~---~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 577 (615)
T 1pgu_A 501 TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAI---SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII 577 (615)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEE---EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCE
T ss_pred CEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEE---EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceec
Confidence 9999999999999999999999888876 76665443 3346 8999999999999999999987 788
Q ss_pred EEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccccC
Q 020798 281 QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 281 ~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~~ 321 (321)
..+.+|..+|++++|+|++. |++++ .|+.|++|+++.|
T Consensus 578 ~~~~~h~~~v~~l~~s~~~~-l~s~~--~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 578 KALNAHKDGVNNLLWETPST-LVSSG--ADACIKRWNVVLE 615 (615)
T ss_dssp EETTSSTTCEEEEEEEETTE-EEEEE--TTSCEEEEEEC--
T ss_pred hhhhcCccceEEEEEcCCCC-eEEec--CCceEEEEeeecC
Confidence 88999999999999999999 99998 4589999999864
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=276.54 Aligned_cols=300 Identities=15% Similarity=0.252 Sum_probs=239.7
Q ss_pred CCcceeeeeccCCcccEEEEEECCC---CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC
Q 020798 10 FRPYTLTQTLNGHLRAISSVKFSHD---GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR 86 (321)
Q Consensus 10 ~~~~~~~~~~~~h~~~v~~~~~s~~---g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~ 86 (321)
..|....+.+.+|.+.|++++|+|+ |++|++|+.|+.|++|++... .......+.+|...|.+++|+|+++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS------GQTIPKAQQMHTGPVLDVCWSDDGS 99 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT------SCEEEEEEEECSSCEEEEEECTTSS
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC------CceeEEEeccccCCEEEEEECcCCC
Confidence 4466677788999999999999999 699999999999999998631 1122356778999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEE--CCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNF--NPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
+|++++.|+.|++||+.+++... +..|...|.+++| +|++++|++++.|+.|++||+++++.+..+..+. .+.++.
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~ 177 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCAD 177 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEE
T ss_pred EEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEE
Confidence 99999999999999999888655 5679999999999 8999999999999999999999998888877654 555666
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeee-eccCCCCCeEEEEEccCCCE----EEEEecCCeEEEEeCCCC---cEEE
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKT-LIDDENPPVSFVKFSPNGKF----ILVGTLDNTLRLWNYSTG---KILK 236 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~----l~~~~~d~~i~i~d~~~~---~~~~ 236 (321)
+. ...+++++.++.+++|+++....... ...........+.+.++... +++++.|+.|++||+... +.+.
T Consensus 178 ~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 178 VI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp EE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred ec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 55 45788899999999999987543322 22233345566666665544 999999999999999876 4566
Q ss_pred EEeccCCce---------eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEee
Q 020798 237 TYTGHTNSK---------YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGAL 307 (321)
Q Consensus 237 ~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~ 307 (321)
.+..|.... ..+......+++++|++|+.||.|++||+.+++.+..+.+|..+|.+++|+|++++|++|+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 666654310 02334445578999999999999999999999999999999999999999999999999985
Q ss_pred cC-CccEEEcccc
Q 020798 308 DN-DRTVKIWTQE 319 (321)
Q Consensus 308 d~-~~~i~iw~~~ 319 (321)
|+ ...+.+|+.+
T Consensus 336 d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 336 YDWSKGHEFYNPQ 348 (368)
T ss_dssp CCSTTCGGGCCTT
T ss_pred ccccccccccCCC
Confidence 42 1234444443
No 66
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=266.32 Aligned_cols=278 Identities=23% Similarity=0.414 Sum_probs=223.1
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA 105 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 105 (321)
.++|+||+++ +||+|. |++|++||..... ......+.+|...|.+++|+|++++|++|+.|+.|++||++++
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~------~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGD------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCC------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCC------EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 4679999986 777764 9999999875421 1122334578889999999999999999999999999999999
Q ss_pred ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEE
Q 020798 106 TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184 (321)
Q Consensus 106 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 184 (321)
+++..+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+..|...+..+.+.++++.+++++.|+.|++|
T Consensus 100 ~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 177 (318)
T ss_dssp EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEE
Confidence 999999999988876655 4678999999999999998765 4556778899999999999999999999999999999
Q ss_pred eCCCCceee---eeccCCCCCeEEEEEccCCCEE---EEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe
Q 020798 185 DASTGHCMK---TLIDDENPPVSFVKFSPNGKFI---LVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK 258 (321)
Q Consensus 185 d~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~l---~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (321)
|+++++... .....+...+..+.++|++..+ ++++.++.|++||.............. ... ...+. +++.
T Consensus 178 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~-~v~--~~~~~-~~~~ 253 (318)
T 4ggc_A 178 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVC--SILWS-PHYK 253 (318)
T ss_dssp ESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS-CEE--EEEEE-TTTT
T ss_pred ECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee-eee--eeeec-cccc
Confidence 998765322 2223445678889999876543 345678999999999887776654332 222 22333 4555
Q ss_pred EEEE--eCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 259 YIVS--GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 259 ~l~~--~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+++ |+.|+.|++||+++++++..+.+|.++|++++|+|++++|||||. |++|+|||+.
T Consensus 254 ~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~--D~~v~iWd~~ 314 (318)
T 4ggc_A 254 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAA--DETLRLWRCF 314 (318)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEET--TTEEEEECCS
T ss_pred ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEec--CCeEEEEECC
Confidence 4443 458999999999999999999999999999999999999999994 5899999974
No 67
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.8e-39 Score=277.80 Aligned_cols=283 Identities=30% Similarity=0.594 Sum_probs=244.6
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
.+....+.+|...|.+++|+ +++|++|+.|+.|++|++.. ...+..+.+|...|.++.|+ ++.+++|+
T Consensus 149 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~--------~~~~~~~~~h~~~v~~~~~~--~~~l~s~s 216 (445)
T 2ovr_B 149 GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET--------GECIHTLYGHTSTVRCMHLH--EKRVVSGS 216 (445)
T ss_dssp CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT--------TEEEEEECCCSSCEEEEEEE--TTEEEEEE
T ss_pred CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc--------CcEEEEECCCCCcEEEEEec--CCEEEEEe
Confidence 44667789999999999997 67999999999999998753 23456778899999999995 56899999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
.|+.|++||+.+++....+.+|...+.++++ +++.+++++.|+.|++||+++++.+..+..|...+.+++| ++..+
T Consensus 217 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 292 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHV 292 (445)
T ss_dssp TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEE
T ss_pred CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEE
Confidence 9999999999999999999999999999999 6789999999999999999999999999999999999999 78899
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec---cCCceeEEE
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG---HTNSKYCIS 249 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~ 249 (321)
++++.|+.|++||+++++....+. .+...+..+.+ +++++++++.|+.|++||+++++.+..+.. |...+.++.
T Consensus 293 ~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 369 (445)
T 2ovr_B 293 VSGSLDTSIRVWDVETGNCIHTLT-GHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ 369 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC-CCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEE
T ss_pred EEEeCCCeEEEEECCCCCEEEEEc-CCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEE
Confidence 999999999999999988776654 44555666555 577999999999999999999999999876 444444332
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe-----cCCCCCeEEEEecCCCceEEEEeecCCcc----EEEccccc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL-----EGHTDPVISVASHPTENIIASGALDNDRT----VKIWTQEK 320 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~p~~~~l~s~~~d~~~~----i~iw~~~~ 320 (321)
. ++.+|++|+.||.|++||+.+++.+..+ .+|..+|++++|+|++.++|+|+.| |. |.+||.+.
T Consensus 370 ---~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d--g~~~~~l~v~df~~ 442 (445)
T 2ovr_B 370 ---F--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN--GTEETKLLVLDFDV 442 (445)
T ss_dssp ---E--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSS--SSSCCEEEEEECCC
T ss_pred ---E--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccC--CCCccEEEEEECCC
Confidence 2 5789999999999999999999988877 4688899999999999999999855 55 99999875
Q ss_pred C
Q 020798 321 E 321 (321)
Q Consensus 321 ~ 321 (321)
+
T Consensus 443 ~ 443 (445)
T 2ovr_B 443 D 443 (445)
T ss_dssp C
T ss_pred C
Confidence 4
No 68
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2e-39 Score=276.57 Aligned_cols=242 Identities=34% Similarity=0.611 Sum_probs=207.2
Q ss_pred cccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCc------------------ccEEEEEECCCCCEEEE
Q 020798 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHT------------------NYVFCVNFNPQSNMIVS 132 (321)
Q Consensus 71 ~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~~ 132 (321)
+|...|.+++|+|+|++|++|+ ++.+++|++.+++.+..+..|. ..|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999876 6899999999988776665443 24899999999999999
Q ss_pred eeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-C
Q 020798 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-N 211 (321)
Q Consensus 133 ~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~ 211 (321)
++.|+.|++||+.+++....+..|...|.+++|+|+++.|++++.|++|++||++++++...+. ....+..++++| +
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS--IEDGVTTVAVSPGD 218 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSTT
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE--cCCCcEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999988766553 345688999999 8
Q ss_pred CCEEEEEecCCeEEEEeCCCCcEEEEE-------eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc-------
Q 020798 212 GKFILVGTLDNTLRLWNYSTGKILKTY-------TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR------- 277 (321)
Q Consensus 212 g~~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~------- 277 (321)
+++|++++.|+.|++||+++++.+..+ .+|...+.+ ....+++++|++|+.||.|++||+++.
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~---v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS---VVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE---EEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE---EEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 999999999999999999999887776 345555443 334578999999999999999999753
Q ss_pred -----eEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 278 -----KVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 278 -----~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.....+.+|...|.+++|+|++.+|++|+. |+.|++||.+.
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~--D~~v~iwd~~~ 341 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK--DRGVLFWDKKS 341 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGGGCEEEEEET--TSEEEEEETTT
T ss_pred CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC--CCeEEEEECCC
Confidence 345567889999999999999999999994 58999999864
No 69
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-41 Score=295.29 Aligned_cols=296 Identities=12% Similarity=0.101 Sum_probs=216.3
Q ss_pred eeccCCcccEEEEEECCC------CCEEEEecCCceEEEeeccccCCCC---CCCCCcccccccccccEEEEEECCCCCE
Q 020798 17 QTLNGHLRAISSVKFSHD------GRLLASSSADKTLLTYSLSSISNSD---STPPSPLQKFTGHEQGVSDLVFSSDSRF 87 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~------g~~l~~~~~d~~v~~~~~~~~~~~~---~~~~~~~~~~~~h~~~i~~~~~~~~~~~ 87 (321)
..+.+|.+.|.+++|+|+ +.+||+++.|+.|++|++....... .....+...+.+|...|.+++|++++ .
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 345678899999999997 5799999999999999986532110 01123445678899999999999864 7
Q ss_pred EEEEeCCCcEEEEecCCcc-eeeeeecCcccEEEE--EECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEeCCCC--Cee
Q 020798 88 LVSASDDKTIRLWDVPTAT-CLKTLIGHTNYVFCV--NFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLPAHSD--PVT 161 (321)
Q Consensus 88 l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~--~v~ 161 (321)
|++|+.||+|++||+.++. +...+.+|...|.++ .++|++ .+|++++.|++|++||++++++...+..|.. .+.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 9999999999999998764 345678999999999 578887 8999999999999999998776655555543 578
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 162 AVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
+++|+|++..+++++.|++|++||++++.+...+. .+...|..++|+|+|++|++|+.|++|++||+..+ .+..+...
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~ 437 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNS 437 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC---
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeee-cCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccC
Confidence 99999999999999999999999999887766554 46778999999999999999999999999998653 21111100
Q ss_pred C--CceeEE-EeEEEecCCeEEEEeCCCCeEEEEEcc-cceEEEEecCCCCCeEEEEecCCCc---eEEEEeecCCccEE
Q 020798 242 T--NSKYCI-SSTFSVTNGKYIVSGSEDSCVYLWELQ-SRKVVQKLEGHTDPVISVASHPTEN---IIASGALDNDRTVK 314 (321)
Q Consensus 242 ~--~~~~~~-~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~p~~~---~l~s~~~d~~~~i~ 314 (321)
. .....+ ...+ .+++..+. ...+ +++|+.. ++..+..+.+|..+|.+|+|+|++. ++|+|+ .+|.|+
T Consensus 438 ~~~~~~~~v~~v~~-sp~g~~~~-~~~~--~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~--~~g~vr 511 (524)
T 2j04_B 438 SATQKSLRLWKWDY-SIKDDKYR-IDSS--YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSN--SAGLLT 511 (524)
T ss_dssp ---CCCCEEEECBC-CSSSCEEE-ECCC--CCCCC-------------CCCSCCCEEECCSTTTTTEEEEEC--TTSEEE
T ss_pred ccceeeeEEEEecc-CCCCCeEE-ccCC--ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhc--cCceEE
Confidence 0 000112 2222 35565432 2222 2333332 4566778899999999999999965 888887 469999
Q ss_pred EcccccC
Q 020798 315 IWTQEKE 321 (321)
Q Consensus 315 iw~~~~~ 321 (321)
||+++.|
T Consensus 512 lw~l~~~ 518 (524)
T 2j04_B 512 LEYLSLE 518 (524)
T ss_dssp EEECSCC
T ss_pred EEEcccc
Confidence 9998765
No 70
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.8e-39 Score=278.74 Aligned_cols=279 Identities=32% Similarity=0.652 Sum_probs=241.1
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
..+.+.+|.+.|.. +++++|++|++|+.|+.|++|++.. ...+..+.+|...|.++.|+ ++++++|+.|
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~--------~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~d 178 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT--------GKCLRTLVGHTGGVWSSQMR--DNIIISGSTD 178 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTT--------CCEEEECCCCSSCEEEEEEE--TTEEEEEETT
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCC--------CcEEEEEcCCCCCEEEEEec--CCEEEEEeCC
Confidence 34567899887533 3556799999999999999998753 23566778999999999997 5699999999
Q ss_pred CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
|.|++||+.+++....+.+|...|.++.++ ++.+++++.||.|++||+++++....+..|..++.+++| ++..+++
T Consensus 179 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~ 254 (445)
T 2ovr_B 179 RTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVS 254 (445)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEE
T ss_pred CeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEE
Confidence 999999999999999999999999999995 568999999999999999999999999999999999998 6788999
Q ss_pred EeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
++.|+.|++||+++++....+. .+...+..+.+ ++.++++++.|+.|++||+++++.+..+.+|.....++.
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~----- 326 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME----- 326 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEEC-CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE-----
T ss_pred EcCCCEEEEEECCCCcEeEEec-CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE-----
Confidence 9999999999999888776654 45567888888 888999999999999999999999999988876654432
Q ss_pred cCCeEEEEeCCCCeEEEEEcccceEEEEecC---CCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLEG---HTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.++.++++|+.||.|++||+++++.+..+.+ |..+|.+++|+ +++|++|+ .||.|++||.+.
T Consensus 327 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~--~dg~v~iwd~~~ 391 (445)
T 2ovr_B 327 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSS--DDGTVKLWDLKT 391 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEE--TTSEEEEEETTT
T ss_pred EeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEe--CCCeEEEEECCC
Confidence 2477999999999999999999999888876 88899999996 57999998 458999999864
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.6e-41 Score=277.10 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=200.1
Q ss_pred ccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc--eeeeeecCcccEEEEEECC--CCCEEEEeeCCCcEEEEe
Q 020798 68 KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT--CLKTLIGHTNYVFCVNFNP--QSNMIVSGAFDETVRIWD 143 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd 143 (321)
.+.+|.+.|.+++|+|+|++|++|+.|++|++||+.++. .+..+.+|...|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998764 4567889999999999986 388999999999999999
Q ss_pred cCCCE--EEEEEeCCCCCeeEEEEccC--CCEEEEEeCCCeEEEEeCCCCce--eeeeccCCCCCeEEEEEccC------
Q 020798 144 VKTGK--CLKVLPAHSDPVTAVDFNRD--GTMIVTSSYDGLCRIWDASTGHC--MKTLIDDENPPVSFVKFSPN------ 211 (321)
Q Consensus 144 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~------ 211 (321)
+++++ ....+..|...|.+++|+|+ +.+|++++.|+.|++||++.+.. .......+...+..++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98763 55667789999999999998 77999999999999999986532 12333455667888999987
Q ss_pred -----------CCEEEEEecCCeEEEEeCCCC---cEEEEEeccCCceeEEEeEEEecCC----eEEEEeCCCCeEEEEE
Q 020798 212 -----------GKFILVGTLDNTLRLWNYSTG---KILKTYTGHTNSKYCISSTFSVTNG----KYIVSGSEDSCVYLWE 273 (321)
Q Consensus 212 -----------g~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~dg~i~vwd 273 (321)
+++|++++.|+.|++||++.. +.+..+.+|...+.++. | .+++ .+|++|+.||+|++|+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~--~-sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVA--W-APSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEE--C-CCCSSCSCCEEEEEETTCEEEEEE
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEE--e-cCCCCCCCceEEEEcCCCeEEEEE
Confidence 468999999999999999755 45666777877655543 2 3554 7899999999999999
Q ss_pred cccc---e-EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 274 LQSR---K-VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 274 ~~~~---~-~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+... + ....+..|..+|.+++|+|++++||+|+. |+.|+||+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~--D~~v~lw~~~ 292 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG--DNKVTLWKES 292 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES--SSCEEEEEEC
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC--CCeEEEEEEC
Confidence 9762 1 22345668899999999999999999984 5899999975
No 72
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.1e-40 Score=279.65 Aligned_cols=285 Identities=21% Similarity=0.353 Sum_probs=230.1
Q ss_pred cEEEEEECCCCCEE-EEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC-CCCEEEEEeCCCcEEEEec
Q 020798 25 AISSVKFSHDGRLL-ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS-DSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 25 ~v~~~~~s~~g~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~ 102 (321)
....++++|+...+ ++++.||.|.+|++..... ....+..+.+|...|.+++|+| ++++|++|+.||.|++||+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~----~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~ 111 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGR----VDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEI 111 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE----CCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEEC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCC----CCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEc
Confidence 34458899887654 4578999999999854211 1234456789999999999999 8999999999999999999
Q ss_pred CCc-------ceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEE--eCCCCCeeEEEEccCCCEE
Q 020798 103 PTA-------TCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVL--PAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 103 ~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l 172 (321)
.++ +.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++....+ ..|...|.+++|+|+++.|
T Consensus 112 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 112 PDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp CTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE
T ss_pred cCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE
Confidence 887 5567788999999999999998 69999999999999999999998888 7899999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccCC-CCCeEEEEEccCCCEEEEE---ecCCeEEEEeCCCCcE-EEEEe-ccCCcee
Q 020798 173 VTSSYDGLCRIWDASTGHCMKTLIDDE-NPPVSFVKFSPNGKFILVG---TLDNTLRLWNYSTGKI-LKTYT-GHTNSKY 246 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~---~~d~~i~i~d~~~~~~-~~~~~-~~~~~~~ 246 (321)
++++.|+.|++||+++++....+...+ ...+..+.|+|++++|+++ +.|+.|++||+++++. +.... .+.....
T Consensus 192 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 192 CTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred EEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 999999999999999988777763333 3347889999999999998 6899999999988654 33332 2333332
Q ss_pred EEEeEEEecCCeEEE-EeCCCCeEEEEEcccceE-EEEecC--CCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 247 CISSTFSVTNGKYIV-SGSEDSCVYLWELQSRKV-VQKLEG--HTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 247 ~~~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~-~~~~~~--h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
. ....+++++|+ +|+.||.|++||+.+++. +..+.. |..+|.+++|+|++.+++++ ++.+++|++..
T Consensus 272 ~---~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~----~~~~~~~~l~~ 342 (402)
T 2aq5_A 272 L---PFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK----CEIARFYKLHE 342 (402)
T ss_dssp E---EEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG----TEEEEEEEEET
T ss_pred E---EEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceec----ceeEEEEEcCC
Confidence 2 33346777775 677899999999998763 444433 56899999999999998863 45899999753
No 73
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.7e-39 Score=268.93 Aligned_cols=246 Identities=25% Similarity=0.459 Sum_probs=205.2
Q ss_pred ccccccccccEEEEEE-----CC-CCCEEEEEeCCCcEEEEecCCc-------ceeeeeecCcccEEEEEECCCCCEEEE
Q 020798 66 LQKFTGHEQGVSDLVF-----SS-DSRFLVSASDDKTIRLWDVPTA-------TCLKTLIGHTNYVFCVNFNPQSNMIVS 132 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~-----~~-~~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~ 132 (321)
...+.+|.+.|.+++| ++ ++++|++|+.|++|++||+... .....+.+|...|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 4567899999999999 76 8999999999999999998753 345667899999999999999999999
Q ss_pred eeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee-ccCCCCCeEEEEEccC
Q 020798 133 GAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL-IDDENPPVSFVKFSPN 211 (321)
Q Consensus 133 ~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~ 211 (321)
++.|++|++||+++++....+..|...|.+++|+|+++.+++++.|+.|++||+......... ...+...+.+++|+|+
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999743222111 1245567899999998
Q ss_pred C----------CEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc-eEE
Q 020798 212 G----------KFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR-KVV 280 (321)
Q Consensus 212 g----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~ 280 (321)
+ .++++++.|+.|++|| ...+....+.+|...+.++ ...+++++|++|+.||.|++||+... ...
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~---~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHL---SISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEE---EECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEE---EECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 7 7899999999999999 4566777788887765544 34578999999999999999999543 333
Q ss_pred EEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 281 QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 281 ~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
..+ .+...|.+++|+|++.++++|+ |+.|++|+.+
T Consensus 250 ~~~-~~~~~v~~v~~sp~~~~la~~~---d~~v~iw~~~ 284 (343)
T 2xzm_R 250 REF-DAGSTINQIAFNPKLQWVAVGT---DQGVKIFNLM 284 (343)
T ss_dssp EEE-ECSSCEEEEEECSSSCEEEEEE---SSCEEEEESS
T ss_pred eee-cCCCcEEEEEECCCCCEEEEEC---CCCEEEEEeC
Confidence 333 2456799999999999887664 4679999975
No 74
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.7e-40 Score=273.82 Aligned_cols=250 Identities=17% Similarity=0.262 Sum_probs=197.6
Q ss_pred eeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--CCCEEEEEeC
Q 020798 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--DSRFLVSASD 93 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--~~~~l~~~~~ 93 (321)
...+.+|.+.|++++|+|+|++||+|+.|+.|++|++.... ...+..+.+|...|.+++|++ ++++|++|+.
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~------~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~ 79 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG------QILIADLRGHEGPVWQVAWAHPMYGNILASCSY 79 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE------EEEEEEEECCSSCEEEEEECCGGGSSCEEEEET
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC------cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC
Confidence 44568999999999999999999999999999999985311 123456789999999999986 4899999999
Q ss_pred CCcEEEEecCCcc--eeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCCE---EEEEEeCCCCCeeEEEEc
Q 020798 94 DKTIRLWDVPTAT--CLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTGK---CLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 94 d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~---~~~~~~~~~~~v~~~~~~ 166 (321)
|++|++||+++++ ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+. ....+..|...+.+++|+
T Consensus 80 D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 80 DRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp TSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEEC
T ss_pred CCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEc
Confidence 9999999998763 45567789999999999998 7899999999999999998753 234456788899999999
Q ss_pred cC-----------------CCEEEEEeCCCeEEEEeCCCCc---eeeeeccCCCCCeEEEEEccCC----CEEEEEecCC
Q 020798 167 RD-----------------GTMIVTSSYDGLCRIWDASTGH---CMKTLIDDENPPVSFVKFSPNG----KFILVGTLDN 222 (321)
Q Consensus 167 ~~-----------------~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~g----~~l~~~~~d~ 222 (321)
|+ +..|++++.|+.|++||++... ... .+..+...|..++|+|++ ++|++++.|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~-~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQ-KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEE-CCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceee-ecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 97 3689999999999999997542 233 334567789999999986 8899999999
Q ss_pred eEEEEeCCCCc----EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 223 TLRLWNYSTGK----ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 223 ~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
+|++||+.+.. ....+..|...+..+ .+.+++++|++++.||.|++|+..
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v---~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKFNDVVWHV---SWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEECSSCEEEE---EECTTTCCEEEEESSSCEEEEEEC
T ss_pred eEEEEEccCccccchhhhhhhcCCCcEEEE---EEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999987621 122334455554433 335789999999999999999975
No 75
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-39 Score=300.59 Aligned_cols=214 Identities=14% Similarity=0.241 Sum_probs=178.9
Q ss_pred cCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEE
Q 020798 9 SFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFL 88 (321)
Q Consensus 9 ~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l 88 (321)
.|.++...+ .||...|++++|+|++++||+|+.|+.|++|+.... .... ...|...|.+++|+| +++|
T Consensus 5 ~~~~~~~~~--~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~--------~~~~-~~~~~~~V~~l~fsp-g~~L 72 (902)
T 2oaj_A 5 IFSLAETNK--YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV--------EVVI-KLEDRSAIKEMRFVK-GIYL 72 (902)
T ss_dssp TEEEEEEEE--EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC--------EEEE-ECSSCCCEEEEEEET-TTEE
T ss_pred eeeeccccc--cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc--------EEEE-EcCCCCCEEEEEEcC-CCEE
Confidence 344444333 489999999999999999999999999999976431 1112 234778999999999 8899
Q ss_pred EEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEE-----------EEEeCCC
Q 020798 89 VSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL-----------KVLPAHS 157 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-----------~~~~~~~ 157 (321)
++++.|+.|++||+.+++++..+. |...|.+++|+|++++|++|+.||.|++||+++++.. ..+..|.
T Consensus 73 ~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred EEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 999999999999999998877775 6678999999999999999999999999999988754 2235688
Q ss_pred CCeeEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeeccC-----------------CCCCeEEEEEccCCCEEEEEe
Q 020798 158 DPVTAVDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLIDD-----------------ENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 158 ~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~l~~~~ 219 (321)
.+|.+++|+|+ +..+++++.|+.+ +||+++++....+... +...+..++|+|+|++|++++
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 99999999996 4688999999999 9999998776655322 135699999999999999999
Q ss_pred cCCeEEEEeCCCCcEEE
Q 020798 220 LDNTLRLWNYSTGKILK 236 (321)
Q Consensus 220 ~d~~i~i~d~~~~~~~~ 236 (321)
.|+.|++||+++++.+.
T Consensus 231 ~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 231 EDNSLVFWDANSGHMIM 247 (902)
T ss_dssp TTCCEEEEETTTCCEEE
T ss_pred CCCeEEEEECCCCcEEE
Confidence 99999999998887665
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.8e-38 Score=274.49 Aligned_cols=291 Identities=26% Similarity=0.465 Sum_probs=235.9
Q ss_pred ccccccCC--cceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEE
Q 020798 4 DQSLESFR--PYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVF 81 (321)
Q Consensus 4 ~~~~~~~~--~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 81 (321)
|..+..++ ..+....+.+|.+.|++++|+|++ +|++|+.|+.|++|++.. ...+..+.+|...|.+++|
T Consensus 141 dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~--------~~~~~~~~~h~~~v~~l~~ 211 (464)
T 3v7d_B 141 DKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK--------GCCTHVFEGHNSTVRCLDI 211 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT--------TEEEEEECCCSSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC--------CcEEEEECCCCCccEEEEE
Confidence 33444333 345677788999999999999988 999999999999998753 2346677889999999999
Q ss_pred C--CCCCEEEEEeCCCcEEEEecCCcce-----------------------eeeeecCcccEEEEEECCCCCEEEEeeCC
Q 020798 82 S--SDSRFLVSASDDKTIRLWDVPTATC-----------------------LKTLIGHTNYVFCVNFNPQSNMIVSGAFD 136 (321)
Q Consensus 82 ~--~~~~~l~~~~~d~~i~iwd~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 136 (321)
+ ++++++++++.|+.|++||+.+... ...+.+|...+.++ +++++.+++++.|
T Consensus 212 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d 289 (464)
T 3v7d_B 212 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYD 289 (464)
T ss_dssp EESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETT
T ss_pred ecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCC
Confidence 8 5788999999999999999987642 34566788888776 5778999999999
Q ss_pred CcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEE
Q 020798 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFIL 216 (321)
Q Consensus 137 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 216 (321)
+.|++||+++++.+..+..|...|.+++|+|+++.+++++.||.|++||+++++.+..+. .+...+..+.++ +++++
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~ 366 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ-GHTALVGLLRLS--DKFLV 366 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEC--SSEEE
T ss_pred CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-CCCCcEEEEEEc--CCEEE
Confidence 999999999999999999999999999999999999999999999999999988777664 456778888886 57999
Q ss_pred EEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEE-ecCCCCCeEEEEe
Q 020798 217 VGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK-LEGHTDPVISVAS 295 (321)
Q Consensus 217 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~h~~~v~~~~~ 295 (321)
+++.|+.|++||+.+++....... ...... ....+++.++++|+ ||.|++||+++++.+.. +..|..+|.+++|
T Consensus 367 s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~---~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~ 441 (464)
T 3v7d_B 367 SAAADGSIRGWDANDYSRKFSYHH-TNLSAI---TTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNF 441 (464)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC-TTCCCE---EEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEE
T ss_pred EEeCCCcEEEEECCCCceeeeecC-CCCccE---EEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEe
Confidence 999999999999998876655532 222222 22236788999888 89999999999999876 6778999999999
Q ss_pred cCCCceEEEEeecCCccEEEc
Q 020798 296 HPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 296 ~p~~~~l~s~~~d~~~~i~iw 316 (321)
+ +..+++++.+ ++.+.+|
T Consensus 442 ~--~~~l~~~~~~-~g~~~i~ 459 (464)
T 3v7d_B 442 K--GKTLVAAVEK-DGQSFLE 459 (464)
T ss_dssp E--TTEEEEEEEE-TTEEEEE
T ss_pred c--CCEEEEEEEe-CCeEEEE
Confidence 7 4444444433 3555444
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.7e-39 Score=309.00 Aligned_cols=294 Identities=21% Similarity=0.412 Sum_probs=248.4
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--CCCEEEE
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--DSRFLVS 90 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--~~~~l~~ 90 (321)
.+....+.+|...|.+++|+|+|++|++++.|+.|++|++.. ...+..+.+|...|.+++|+| ++.++++
T Consensus 647 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s 718 (1249)
T 3sfz_A 647 GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT--------GKLVHTYDEHSEQVNCCHFTNKSNHLLLAT 718 (1249)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--------CCEEEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC--------CceEEEEcCCCCcEEEEEEecCCCceEEEE
Confidence 345677889999999999999999999999999999998753 345677889999999999999 4568999
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC-------------CC
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA-------------HS 157 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-------------~~ 157 (321)
|+.|+.|++||+.++++...+.+|...|.+++|+|+++.+++++.||.|++||+++++....+.. ..
T Consensus 719 g~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1249)
T 3sfz_A 719 GSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVE 798 (1249)
T ss_dssp EETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCC
T ss_pred EeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999998877665532 22
Q ss_pred CCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEE
Q 020798 158 DPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT 237 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~ 237 (321)
..+.+++|+|++..+++++ ++.+.+||+.++.........+...+..++|+|+++++++++.|+.|++||+.++..+..
T Consensus 799 ~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~ 877 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVAD 877 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEE
T ss_pred ceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeee
Confidence 3688999999999988887 689999999998888777767778899999999999999999999999999999998888
Q ss_pred EeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEE--------------------------------------------
Q 020798 238 YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWE-------------------------------------------- 273 (321)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd-------------------------------------------- 273 (321)
+.+|...+.++. ..+++.+|++++.||.|++|+
T Consensus 878 ~~~h~~~v~~v~---~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1249)
T 3sfz_A 878 CRGHLSWVHGVM---FSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTG 954 (1249)
T ss_dssp ECCCSSCEEEEE---ECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSC
T ss_pred cCCCccceEEEE---ECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcc
Confidence 888776544332 234566666666666666665
Q ss_pred -----------------------------------cccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 274 -----------------------------------LQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 274 -----------------------------------~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+.+++....+.+|..+|.+++|+|++++|++++. |+.|++|+.
T Consensus 955 ~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~--dg~i~vwd~ 1032 (1249)
T 3sfz_A 955 QIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE--DSVIQVWNW 1032 (1249)
T ss_dssp CEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECS--SSBEEEEET
T ss_pred eEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcC--CCEEEEEEC
Confidence 3444455666789999999999999999999984 589999997
Q ss_pred cc
Q 020798 319 EK 320 (321)
Q Consensus 319 ~~ 320 (321)
+.
T Consensus 1033 ~~ 1034 (1249)
T 3sfz_A 1033 QT 1034 (1249)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-39 Score=298.23 Aligned_cols=160 Identities=15% Similarity=0.212 Sum_probs=137.9
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
.|...|.+++|+| |++|++++.|+.|++|++... ..+..+. |...|.+++|+|++++|++|+.||.|++|
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~--------~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lw 125 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ--------KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVY 125 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC--------SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC--------cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 5788999999999 889999999999999998642 2334443 66789999999999999999999999999
Q ss_pred ecCCccee-----------eeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCC------------
Q 020798 101 DVPTATCL-----------KTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAH------------ 156 (321)
Q Consensus 101 d~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~------------ 156 (321)
|+.+++.. ....+|...|.+++|+|+ +..+++++.|+.| +||+++++....+..|
T Consensus 126 d~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~ 204 (902)
T 2oaj_A 126 DIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSE 204 (902)
T ss_dssp ETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCC
T ss_pred ECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccc
Confidence 99887653 234678899999999996 4689999999999 9999999988877655
Q ss_pred ------CCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce
Q 020798 157 ------SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191 (321)
Q Consensus 157 ------~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 191 (321)
...|.+++|+|++.+|++++.|+.|++||++++++
T Consensus 205 ~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 205 KTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp CTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred ccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 46799999999999999999999999999876543
No 79
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-38 Score=275.02 Aligned_cols=293 Identities=18% Similarity=0.220 Sum_probs=230.3
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccC---CC-----CCC----------------------------------
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSIS---NS-----DST---------------------------------- 61 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~---~~-----~~~---------------------------------- 61 (321)
.++.+++|+|+|++|+++ .++.|.+|++.... .. ...
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 478899999999976666 57899999976543 00 000
Q ss_pred -------CCCcccccccccccEEEEEECCCCCEE-EEEeCCCcEEEEecC--Ccceeeeee--cCcccEEEEEECCCCCE
Q 020798 62 -------PPSPLQKFTGHEQGVSDLVFSSDSRFL-VSASDDKTIRLWDVP--TATCLKTLI--GHTNYVFCVNFNPQSNM 129 (321)
Q Consensus 62 -------~~~~~~~~~~h~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~ 129 (321)
...+.....+|...|.+++|+|++++| ++++.|+.|++||+. +++.+..+. .|...+.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 000011123566689999999999996 889999999999998 777777665 56788999999999999
Q ss_pred EEEeeCCCcEEEEecCCCEEEE----EEeCCCCCeeEEEEccC---CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCC
Q 020798 130 IVSGAFDETVRIWDVKTGKCLK----VLPAHSDPVTAVDFNRD---GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP 202 (321)
Q Consensus 130 l~~~~~dg~i~~wd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 202 (321)
|++++.+|.+++|++.+++... .+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+...+...
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 9999999999999998776443 66779999999999999 9999999999999999999888777766677788
Q ss_pred eEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC----------------------CceeEEEeEEEecCCeEE
Q 020798 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT----------------------NSKYCISSTFSVTNGKYI 260 (321)
Q Consensus 203 ~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l 260 (321)
+..++|+ ++++|++++.|+.|++||+.+++.+..+..+. .....+......+++++|
T Consensus 244 v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 9999999 99999999999999999999999888876321 111223344455788899
Q ss_pred EEeC-CCCeEEEEEc--ccc---eEEEEecCCCCCeEEEEecCCCceEEEEeec----CCccEEEcccc
Q 020798 261 VSGS-EDSCVYLWEL--QSR---KVVQKLEGHTDPVISVASHPTENIIASGALD----NDRTVKIWTQE 319 (321)
Q Consensus 261 ~~~~-~dg~i~vwd~--~~~---~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d----~~~~i~iw~~~ 319 (321)
++++ .++.|++|++ ..+ +.+..+..| ..|.+++|+|++.+++.++.+ ++..|++|..+
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 8888 8999999999 555 667778888 889999999965555544432 24568888764
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-38 Score=267.62 Aligned_cols=250 Identities=23% Similarity=0.417 Sum_probs=211.3
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC--CcceeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEE
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP--TATCLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVR 140 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~ 140 (321)
.+..+.+|...|.+++|+|++++|++|+.||.|++||+. +.+....+.+|...|.+++|+|+ +++|++++.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 345678999999999999999999999999999999997 55667778899999999999987 89999999999999
Q ss_pred EEecCCCE--EEEEEeCCCCCeeEEEEccC--CCEEEEEeCCCeEEEEeCCCCcee-eeeccCCCCCeEEEEEcc-----
Q 020798 141 IWDVKTGK--CLKVLPAHSDPVTAVDFNRD--GTMIVTSSYDGLCRIWDASTGHCM-KTLIDDENPPVSFVKFSP----- 210 (321)
Q Consensus 141 ~wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~----- 210 (321)
+||+++++ ....+..|...|.+++|+|+ +..+++++.|+.|++||++..... ......+...+..++|+|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999987 66777889999999999999 899999999999999999876432 223345667899999999
Q ss_pred --------CCCEEEEEecCCeEEEEeCCCCc----EEEEEeccCCceeEEEeEEEecC---CeEEEEeCCCCeEEEEEcc
Q 020798 211 --------NGKFILVGTLDNTLRLWNYSTGK----ILKTYTGHTNSKYCISSTFSVTN---GKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 211 --------~g~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~ 275 (321)
++.++++++.|+.|++||+++++ .+..+.+|...+.++ ...++ +.+|++++.||.|++||+.
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~---~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV---AWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE---EECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE---EECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 69999999999999999997654 445666777665443 33467 8999999999999999998
Q ss_pred cce-----EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 276 SRK-----VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 276 ~~~-----~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
++. .+.....|...|.+++|+|++++|++++. |+.|++|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~iw~~~ 286 (379)
T 3jrp_A 240 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--DNKVTLWKEN 286 (379)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES--SSSEEEEEEE
T ss_pred CCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC--CCcEEEEeCC
Confidence 763 22233448889999999999999999984 5899999986
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-37 Score=262.96 Aligned_cols=246 Identities=17% Similarity=0.230 Sum_probs=215.4
Q ss_pred cccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc--eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC
Q 020798 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT--CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT 146 (321)
Q Consensus 69 ~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 146 (321)
+..|...|.+++|+|++++|++++.|+.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 34588999999999999999999999999999998886 7788889999999999999999999999999999999988
Q ss_pred CEEEEEE--eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce---eeeeccCCCCCeEEEEEccCCCEEEEEecC
Q 020798 147 GKCLKVL--PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC---MKTLIDDENPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 147 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d 221 (321)
++..... ..|...+.+++|+|+++.+++++.|+.+++||++.+.. .......+...+..++|+|++++|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 8754443 56888999999999999999999999999999987652 334445567789999999999999999999
Q ss_pred CeEEEEeC------------------CCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 222 NTLRLWNY------------------STGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 222 ~~i~i~d~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
+.|++||+ ..++.+..+..|.....++ ...+++.+|++++.||.|++||+++++.+..+
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV---CFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE---EECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEE---EECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 99999995 4677888887777665443 33478999999999999999999999999999
Q ss_pred cCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 284 EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 284 ~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..|..+|.+++|+|++.+|++| .|+.|++|+.+.
T Consensus 241 ~~~~~~v~~~~~~~~~~~l~~~---~d~~i~i~~~~~ 274 (372)
T 1k8k_C 241 ASETLPLLAVTFITESSLVAAG---HDCFPVLFTYDS 274 (372)
T ss_dssp ECSSCCEEEEEEEETTEEEEEE---TTSSCEEEEEET
T ss_pred ccCCCCeEEEEEecCCCEEEEE---eCCeEEEEEccC
Confidence 9999999999999999999887 358999999864
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-37 Score=264.23 Aligned_cols=253 Identities=19% Similarity=0.301 Sum_probs=209.6
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC--CCEEEEEe
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD--SRFLVSAS 92 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~--~~~l~~~~ 92 (321)
+.+.+.+|...|++++|+|++++|++|+.|+.|++|++.. .....+..+.+|...|.+++|+++ +++|++++
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~ 76 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS 76 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEET------TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCC------CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec
Confidence 4567789999999999999999999999999999999852 112345667889999999999987 89999999
Q ss_pred CCCcEEEEecCCcc--eeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCCE--EEEEEeCCCCCeeEEEEc
Q 020798 93 DDKTIRLWDVPTAT--CLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTGK--CLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 93 ~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~ 166 (321)
.||.|++||+.+++ ....+..|...+.+++|+|+ +.+|++++.|+.|++||++.+. ....+..|...|.+++|+
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~ 156 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 156 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEEC
T ss_pred cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEc
Confidence 99999999999886 66777889999999999999 8999999999999999998773 344567899999999999
Q ss_pred c-------------CCCEEEEEeCCCeEEEEeCCCCcee---eeeccCCCCCeEEEEEccC---CCEEEEEecCCeEEEE
Q 020798 167 R-------------DGTMIVTSSYDGLCRIWDASTGHCM---KTLIDDENPPVSFVKFSPN---GKFILVGTLDNTLRLW 227 (321)
Q Consensus 167 ~-------------~~~~l~~~~~dg~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~---g~~l~~~~~d~~i~i~ 227 (321)
| ++..+++++.|+.|++||++++... ......+...+..++|+|+ +++|++++.|+.|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw 236 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 236 (379)
T ss_dssp CCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE
Confidence 9 6899999999999999999765422 2233456678999999999 8999999999999999
Q ss_pred eCCCCc---EEEEEec--cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 228 NYSTGK---ILKTYTG--HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 228 d~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
|+.++. ....+.. +... +......+++++|++++.||.|++|++..
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPDV---LWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSSC---EEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred eCCCCCccceeeeeccccCCCc---EEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 998764 2222222 3333 33344457899999999999999999874
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-39 Score=283.10 Aligned_cols=261 Identities=10% Similarity=0.099 Sum_probs=197.6
Q ss_pred CcccEEEEEECCCC---------CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 22 HLRAISSVKFSHDG---------RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 22 h~~~v~~~~~s~~g---------~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
+.+.|.+++|+|++ ++||+++.++.. -..+|+++.|++++
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~-------------------------------~~~~~~~~~laS~s 180 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD-------------------------------EPLNEHLEMFDKEK 180 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------------------------------------
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccC-------------------------------CccchhhhhhccCC
Confidence 56789999999987 788888754310 01268889999999
Q ss_pred CCCcEEEEecCCccee----eeeecCcccEEEEEECCC------CCEEEEeeCCCcEEEEecCCCEE-----------EE
Q 020798 93 DDKTIRLWDVPTATCL----KTLIGHTNYVFCVNFNPQ------SNMIVSGAFDETVRIWDVKTGKC-----------LK 151 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~~wd~~~~~~-----------~~ 151 (321)
.|++|+|||+.+++.. ..+.+|.+.|..++|+|+ +.+|++++.||+|++||+..+.. ..
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~ 260 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL 260 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE
T ss_pred CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE
Confidence 9999999999776542 335667888999999996 57999999999999999976532 23
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEE--EEccCC-CEEEEEecCCeEEEEe
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFV--KFSPNG-KFILVGTLDNTLRLWN 228 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~g-~~l~~~~~d~~i~i~d 228 (321)
.+..|...|++++|++++ .|++|+.||+|++||++++.........+...|..+ .|+|+| .+|++++.|++|+|||
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 567789999999999864 799999999999999987644333344567789988 578888 8999999999999999
Q ss_pred CCCCcEEEEEeccCC--ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 229 YSTGKILKTYTGHTN--SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
+++++.+..+.+|.. .+.++ .| .|+++.+++++.|++|++||++++..+..+.+|.++|++++|+|++++|++|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~v~~v--~f-sp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 340 PKDIATTKTTVSRFRGSNLVPV--VY-CPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp GGGHHHHCEEEEECSCCSCCCE--EE-ETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEE
T ss_pred CCCCCcccccccccccCcccce--Ee-CCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEE
Confidence 998876666655543 22233 23 47788899999999999999999888788889999999999999999999999
Q ss_pred ecCCccEEEcccc
Q 020798 307 LDNDRTVKIWTQE 319 (321)
Q Consensus 307 ~d~~~~i~iw~~~ 319 (321)
. |++|++|+..
T Consensus 417 ~--Dgtv~lwd~~ 427 (524)
T 2j04_B 417 A--DGSLIITNAA 427 (524)
T ss_dssp T--TTEEECCBSC
T ss_pred C--CCEEEEEech
Confidence 4 5899999974
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2e-36 Score=252.81 Aligned_cols=248 Identities=27% Similarity=0.483 Sum_probs=214.6
Q ss_pred ccccccccccEEEEEECCC-CCEEEEEeCCCcEEEEecCCcc-----eeeeeecCcccEEEEEECCCCCEEEEeeCCCcE
Q 020798 66 LQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLWDVPTAT-----CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETV 139 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 139 (321)
..++++|.+.|++|+|+|+ +++|++|+.|++|++||+.+.+ +...+.+|...|.+++|+|++++|++++.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3468899999999999997 6899999999999999987643 356678999999999999999999999999999
Q ss_pred EEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC--CEEEE
Q 020798 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG--KFILV 217 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~l~~ 217 (321)
++|+............+...+....+++++..+++++.|+.+++||.............+...+..++|++++ .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 9999999988888888888999999999999999999999999999987665555455666778889998764 56788
Q ss_pred EecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecC
Q 020798 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p 297 (321)
++.|+.|++||+++++.+..+.+|...+.++. ..+++++|++|+.||.|++||+++.+.+..+..+ ..|.+++|+|
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~---~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~ 266 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVT---VSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 266 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEE---ECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECS
T ss_pred EcCCCEEEEEECCCCceeeEecCCCCcEEEEE---ECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCC
Confidence 99999999999999999999998887765543 3578999999999999999999999988888755 5899999999
Q ss_pred CCceEEEEeecCCccEEEccccc
Q 020798 298 TENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 298 ~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
++.+++++ . |+.|++||.+.
T Consensus 267 ~~~~~~~~-~--d~~i~iwd~~~ 286 (340)
T 4aow_A 267 NRYWLCAA-T--GPSIKIWDLEG 286 (340)
T ss_dssp SSSEEEEE-E--TTEEEEEETTT
T ss_pred CCceeecc-C--CCEEEEEECCC
Confidence 98766554 3 58999999864
No 85
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.8e-37 Score=279.24 Aligned_cols=246 Identities=28% Similarity=0.496 Sum_probs=213.0
Q ss_pred ccccccccEEEEEECCCC-CEEEEEeCCCcEEEEecCCc-----ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEE
Q 020798 68 KFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTA-----TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRI 141 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 141 (321)
.+.+|.+.|++++|+|++ ++|++|+.|++|++|++.+. .....+.+|...|.+++|+|++++|++|+.|+.|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 467899999999999874 78999999999999998753 335677899999999999999999999999999999
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee--ccCCCCCeEEEEEccCC--CEEEE
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL--IDDENPPVSFVKFSPNG--KFILV 217 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~g--~~l~~ 217 (321)
||+.+++....+..|...|.+++|+|+++.|++++.|++|++||.......... ...+...+.+++|+|++ ..+++
T Consensus 457 wd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 536 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVS 536 (694)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEE
T ss_pred EECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEE
Confidence 999999999999999999999999999999999999999999998654322211 12455679999999986 58999
Q ss_pred EecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecC
Q 020798 218 GTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHP 297 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p 297 (321)
++.|+.|++||+++++....+.+|...+.++ ...+++++|++|+.||.|++||+.+++.+..+.. ...|.+++|+|
T Consensus 537 ~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v---~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp 612 (694)
T 3dm0_A 537 ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTV---AVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSP 612 (694)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEE---EECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECS
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCCCEEEE---EEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcC
Confidence 9999999999999999999999988775544 3357899999999999999999999998887765 46899999999
Q ss_pred CCceEEEEeecCCccEEEccccc
Q 020798 298 TENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 298 ~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
++.+|++++ ++.|+|||++.
T Consensus 613 ~~~~l~~~~---~~~i~iwd~~~ 632 (694)
T 3dm0_A 613 NRYWLCAAT---EHGIKIWDLES 632 (694)
T ss_dssp SSSEEEEEE---TTEEEEEETTT
T ss_pred CCcEEEEEc---CCCEEEEECCC
Confidence 999888875 35699999864
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-39 Score=273.69 Aligned_cols=243 Identities=15% Similarity=0.174 Sum_probs=198.5
Q ss_pred ccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc--ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC
Q 020798 70 TGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA--TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG 147 (321)
Q Consensus 70 ~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 147 (321)
..+...|.+++|+|++++|++++.|+.|++||+.++ +....+.+|...|.+++|+|++++|++++.|+.|++||+.++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 345678999999999999999999999999999987 677788899999999999999999999999999999999887
Q ss_pred E---EEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce---eeeeccCCCCCeEEEEEccCCCEEEEEecC
Q 020798 148 K---CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC---MKTLIDDENPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 148 ~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d 221 (321)
+ ....+..|...|.+++|+|+++.|++++.|+.|++||+++++. ...+...+...+..++|+|++++|++++.|
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred CceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 6 5666778999999999999999999999999999999988763 444444377889999999999999999999
Q ss_pred CeEEEEeCC------------------CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceE----
Q 020798 222 NTLRLWNYS------------------TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV---- 279 (321)
Q Consensus 222 ~~i~i~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~---- 279 (321)
+.|++||+. .++.+..+ .|...+.++ ...+++++|++++.||.|++||+.+++.
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~---~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAV---GFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEE---EECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEE---EECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence 999999985 24455555 665554443 3457899999999999999999998876
Q ss_pred EEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 280 VQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 280 ~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+..+.+|..+|.+++|+|++++|++|+ .++.+ +|+..
T Consensus 244 ~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~~~-~~~~~ 280 (377)
T 3dwl_C 244 LITVKLSQLPLRSLLWANESAIVAAGY--NYSPI-LLQGN 280 (377)
T ss_dssp CCCEECSSSCEEEEEEEETTEEEEEES--SSSEE-EECCC
T ss_pred eEeecCCCCceEEEEEcCCCCEEEEEc--CCcEE-EEEeC
Confidence 778889999999999999999999986 33444 66553
No 87
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-38 Score=268.51 Aligned_cols=266 Identities=9% Similarity=0.061 Sum_probs=209.0
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcE
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
..+.-...|.+++|||||+++|+++.|++|+ +.. ..+.+.+|...|.+++|+|+| .++.+
T Consensus 10 ~~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~-----------~~~~l~gh~~~v~~V~FsPdg-------~~~~~ 69 (588)
T 2j04_A 10 DRKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPK-----------YAKDINCNSKNLFHVKEFPLE-------FENKL 69 (588)
T ss_dssp CSCCCSSSSCCEEECTTSCEEEECSSSEEEE--EEC-----------CCSCCSSBGGGTEEEEEECCC-------CCCTT
T ss_pred cHhHhhccEEEEEECCCCCEEEEEcCCceee--ccc-----------ccceecCCCccEEEEEECCCC-------CcceE
Confidence 3345567899999999999999999999998 421 112346899999999999998 45655
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCC-----CeeEEEEccCCCEE
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD-----PVTAVDFNRDGTMI 172 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l 172 (321)
.+|+..... ...+ .|...|.+++|+|+|..|++++.||.|++||.+. +...+. |.. .+.+++|+|+|++|
T Consensus 70 ~~~~~~~~~-~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~L 144 (588)
T 2j04_A 70 DFELAQQNG-LLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSI 144 (588)
T ss_dssp TTSCCCSSC-SSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCE
T ss_pred EEEeCCCce-Eeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEE
Confidence 555543222 1222 4578899999999999999999999999999543 556666 665 49999999999999
Q ss_pred EEEeCCCeEEEEeCCCCce-------eeee---ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE---EEEE-
Q 020798 173 VTSSYDGLCRIWDASTGHC-------MKTL---IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI---LKTY- 238 (321)
Q Consensus 173 ~~~~~dg~i~~~d~~~~~~-------~~~~---~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~---~~~~- 238 (321)
++|+.||+|++||+.++.. +..+ ...+...|..++|+|+| +++++.|+.+++||+..++. .+.+
T Consensus 145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE
T ss_pred EEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec
Confidence 9999999999999988752 3333 24456789999999999 88889999999999988763 3455
Q ss_pred eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEe--cCCCceEEEEeecCCccEEEc
Q 020798 239 TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS--HPTENIIASGALDNDRTVKIW 316 (321)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~p~~~~l~s~~~d~~~~i~iw 316 (321)
.+|...+..+.+ . ++.||+++ ++.|++||+.+++......+|.+.|.+++| +|++..|++++ ++|. ++|
T Consensus 223 ~~h~~~V~svaF--s---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~--edG~-klw 293 (588)
T 2j04_A 223 NASRRKITDLKI--V---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSN--KTSY-KVL 293 (588)
T ss_dssp CCCSSCCCCEEE--E---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS--SCEE-EEE
T ss_pred ccccCcEEEEEE--E---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc--CCCC-EEE
Confidence 356555555543 2 57888887 699999999988774444489999999999 99999999987 4578 999
Q ss_pred ccc
Q 020798 317 TQE 319 (321)
Q Consensus 317 ~~~ 319 (321)
..+
T Consensus 294 ~~d 296 (588)
T 2j04_A 294 LED 296 (588)
T ss_dssp ESS
T ss_pred eec
Confidence 753
No 88
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4e-37 Score=285.59 Aligned_cols=252 Identities=21% Similarity=0.403 Sum_probs=224.0
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 45677899999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCe
Q 020798 145 KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNT 223 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~ 223 (321)
.+++.+..+..|...|++++|+|++..+++++.||.|++||+.++.........+...+.+++|+| +++.+++++.|+.
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~ 164 (814)
T 3mkq_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (814)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred CCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999999999999999999999999999999999999877444444456677899999999 8899999999999
Q ss_pred EEEEeCCCCcEEEEEeccC-CceeEEEeEEEe-cCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCce
Q 020798 224 LRLWNYSTGKILKTYTGHT-NSKYCISSTFSV-TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENI 301 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 301 (321)
|++||+.+++....+..+. ....++. +.+ +++.++++++.||.|++||+.+++.+..+.+|..+|.+++|+|++++
T Consensus 165 v~vwd~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 242 (814)
T 3mkq_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVD--YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI 242 (814)
T ss_dssp EEEEETTCSSCSEEEECCCTTCCCEEE--ECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred EEEEECCCCcceeEEecCCCCCEEEEE--EEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 9999998887776666544 4443332 221 27899999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCccEEEccccc
Q 020798 302 IASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 302 l~s~~~d~~~~i~iw~~~~ 320 (321)
|++|+. ||.|++|+...
T Consensus 243 l~~~~~--dg~v~vwd~~~ 259 (814)
T 3mkq_A 243 IISGSE--DGTLKIWNSST 259 (814)
T ss_dssp EEEEET--TSCEEEEETTT
T ss_pred EEEEeC--CCeEEEEECCC
Confidence 999984 58999999763
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.9e-37 Score=262.65 Aligned_cols=259 Identities=17% Similarity=0.255 Sum_probs=216.6
Q ss_pred ceeeeeccCCcccEEEEEECCC----C---CEEEEecCCceEEEeeccccCCCCCCCCCcccccccc-----cccEEEEE
Q 020798 13 YTLTQTLNGHLRAISSVKFSHD----G---RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGH-----EQGVSDLV 80 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~----g---~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~i~~~~ 80 (321)
......+.+|...|++++|+|+ | ++|++++.|+.|++|++..... ........+..| ...|.+++
T Consensus 52 ~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~ 128 (397)
T 1sq9_A 52 KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE---TKKVIFEKLDLLDSDMKKHSFWALK 128 (397)
T ss_dssp GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTT---TCCEEEEEECCSCTTGGGSCEEEEE
T ss_pred CCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcc---cccccceeecccccccCCCcEEEEE
Confidence 3456777899999999999999 9 9999999999999999875321 111114556677 58999999
Q ss_pred EC----CCCCE-EEEEeCCCcEEEEecCC------cceee-----ee-------ecCcccEEEEEECCCCCEEEEeeCCC
Q 020798 81 FS----SDSRF-LVSASDDKTIRLWDVPT------ATCLK-----TL-------IGHTNYVFCVNFNPQSNMIVSGAFDE 137 (321)
Q Consensus 81 ~~----~~~~~-l~~~~~d~~i~iwd~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg 137 (321)
|+ |++++ |++++.|+.|++||+.+ .+.+. .+ ..|...+.+++|+|++ .|++++.|+
T Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg 207 (397)
T 1sq9_A 129 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG 207 (397)
T ss_dssp EECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS
T ss_pred EeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC
Confidence 99 99999 99999999999999988 66555 55 3488889999999999 999999999
Q ss_pred cEEEEecCCCEEEEEEeC---C---CCCeeEEEEccCCCEEEEEeCC---CeEEEEeCCCCceeeeeccC----------
Q 020798 138 TVRIWDVKTGKCLKVLPA---H---SDPVTAVDFNRDGTMIVTSSYD---GLCRIWDASTGHCMKTLIDD---------- 198 (321)
Q Consensus 138 ~i~~wd~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~---------- 198 (321)
.|++||+++++.+..+.. | ...+.+++|+|++.+|++++.| +.|++||+++++.+..+...
T Consensus 208 ~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 287 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGE 287 (397)
T ss_dssp EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CC
T ss_pred cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccc
Confidence 999999999999999988 8 9999999999999999999999 99999999988877666431
Q ss_pred --CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe------cc---------------CCceeEEEeEEEec
Q 020798 199 --ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT------GH---------------TNSKYCISSTFSVT 255 (321)
Q Consensus 199 --~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~~ 255 (321)
+...+..++|+|++++|++++.|+.|++||+++++.+..+. .| ...+..+ ...+
T Consensus 288 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~---~~~~ 364 (397)
T 1sq9_A 288 FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV---KFLK 364 (397)
T ss_dssp BSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE---EEEC
T ss_pred cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEE---Eecc
Confidence 56779999999999999999999999999999999999998 66 5554443 3346
Q ss_pred CC----------eEEEEeCCCCeEEEEEcccce
Q 020798 256 NG----------KYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 256 ~~----------~~l~~~~~dg~i~vwd~~~~~ 278 (321)
++ .+|++++.||.|++|++.+++
T Consensus 365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 66 799999999999999998753
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-38 Score=271.98 Aligned_cols=273 Identities=12% Similarity=0.274 Sum_probs=214.3
Q ss_pred EECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccc-ccccccEEEEEECC-CCCEEEEEeCCCcEEEEecCC---
Q 020798 30 KFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKF-TGHEQGVSDLVFSS-DSRFLVSASDDKTIRLWDVPT--- 104 (321)
Q Consensus 30 ~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~--- 104 (321)
.|+|+++.+++++ .|+. ....+..+ .+|.+.|.+++|+| ++++|++|+.||.|++||+.+
T Consensus 34 ~f~~~~~~~~~~~------~w~~---------~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~ 98 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNL---------RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIV 98 (437)
T ss_dssp GGCCCCCCCCCCC------GGGC---------CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHT
T ss_pred hcCCccccccccc------cccc---------cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECccccc
Confidence 4677888777665 2532 23445666 78999999999999 999999999999999999866
Q ss_pred ccee--eeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC---CCEEEEEEe----------C--CCCCeeEEE--E
Q 020798 105 ATCL--KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK---TGKCLKVLP----------A--HSDPVTAVD--F 165 (321)
Q Consensus 105 ~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~---~~~~~~~~~----------~--~~~~v~~~~--~ 165 (321)
+... .....|...|.+++|+|++++|++++.||.|++||+. +++...... . +...+.++. +
T Consensus 99 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 99 GEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp TCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred CcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 3211 1122589999999999999999999999999999984 443333222 1 455666666 5
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC-CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe-ccCC
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD-ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT-GHTN 243 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~ 243 (321)
++++..+++++.|+.|++||+++++.+..+... +...+.+++|+|++++|++++.|+.|++||+++++.+..+. .+..
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 678999999999999999999998887776543 56689999999999999999999999999999999988886 4444
Q ss_pred ceeEEEeE-EEecCCeEEEEeCCCCeEEEEEcccceEEEEecC--------------------------CCCCeEEEEec
Q 020798 244 SKYCISST-FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG--------------------------HTDPVISVASH 296 (321)
Q Consensus 244 ~~~~~~~~-~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------------------------h~~~v~~~~~~ 296 (321)
.+.++... ...+++.+|++|+.||.|++||+++++.+..+.+ |..+|++++|+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 43333221 2235788999999999999999999887776664 44557788888
Q ss_pred CCCceEEEEeecCCccEEEccccc
Q 020798 297 PTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 297 p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
++++|++|+. |+.|++||++.
T Consensus 339 -~~~~l~s~~~--d~~i~~wd~~~ 359 (437)
T 3gre_A 339 -NDKILLTDEA--TSSIVMFSLNE 359 (437)
T ss_dssp -TTEEEEEEGG--GTEEEEEETTC
T ss_pred -CceEEEecCC--CCeEEEEECCC
Confidence 6789999985 48999999864
No 91
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-36 Score=253.59 Aligned_cols=250 Identities=21% Similarity=0.404 Sum_probs=215.6
Q ss_pred ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 66 LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 66 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
...+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeee----------ccCCC--CCeEEEEE
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD-----GLCRIWDASTGHCMKTL----------IDDEN--PPVSFVKF 208 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~----------~~~~~--~~~~~~~~ 208 (321)
+++....+. +..++.+++|+|++..+++++.+ +.+++||++.......+ ...+. ..+..++|
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 999888887 78899999999999999999998 99999998754321111 11122 27899999
Q ss_pred ccCCCEEEEEecCCeEEEEeCCC-CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC
Q 020798 209 SPNGKFILVGTLDNTLRLWNYST-GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287 (321)
Q Consensus 209 ~~~g~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~ 287 (321)
+|+++++++++.|+.|++||+++ .+.+..+..|...+.++ ...+++.+|++++.||.|++||+++++.+..+. +.
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~ 259 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM---QFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TD 259 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEE---EECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CS
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEE---EECCCCCEEEEecCCceEEEEECCCCceeeeec-CC
Confidence 99999999999999999999998 78888888877765443 334789999999999999999999998888777 67
Q ss_pred CCeEEEEecCCCceEEEEeecCCc------------cEEEccccc
Q 020798 288 DPVISVASHPTENIIASGALDNDR------------TVKIWTQEK 320 (321)
Q Consensus 288 ~~v~~~~~~p~~~~l~s~~~d~~~------------~i~iw~~~~ 320 (321)
.++.+++|+|+++++++++.++.. .|++|+.+.
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 260 CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 899999999999999999854211 788998753
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.1e-36 Score=256.31 Aligned_cols=248 Identities=25% Similarity=0.407 Sum_probs=208.1
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
.|...|++++|+|++++|++|+.||.+++|++.. ...+..+.+|...|.+++| ++++|++++.|+.|++|
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~ 201 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES--------QTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHH 201 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT--------CCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC--------CeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEE
Confidence 3889999999999999999999999999998753 2345677799999999999 56799999999999999
Q ss_pred ecC-CcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCC-EEEEEe--
Q 020798 101 DVP-TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGT-MIVTSS-- 176 (321)
Q Consensus 101 d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-- 176 (321)
|++ .......+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..|...|.+++|+|++. ++++++
T Consensus 202 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 202 DVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred ecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 998 4566777889999999999999999999999999999999999988888889999999999999765 556654
Q ss_pred CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe--cCCeEEEEeCCCCcEEEE--EeccCCceeEEEeEE
Q 020798 177 YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT--LDNTLRLWNYSTGKILKT--YTGHTNSKYCISSTF 252 (321)
Q Consensus 177 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~--~d~~i~i~d~~~~~~~~~--~~~~~~~~~~~~~~~ 252 (321)
.|+.|++||+++++....+. ....+..++|+|+++++++++ .|+.|++||+.+++.... +.+|...+.++ .
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~---~ 356 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYS---A 356 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEE---E
T ss_pred CCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEE---E
Confidence 79999999999988777663 445799999999999999954 899999999998665544 55676665444 3
Q ss_pred EecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 253 SVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
..+++.+|++++.||.|++|++.+++.+...
T Consensus 357 ~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 357 LSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp ECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 3478999999999999999999988776544
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.7e-37 Score=264.61 Aligned_cols=237 Identities=16% Similarity=0.147 Sum_probs=175.6
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCccee-----eeeecCcccEEEEEECC--------CCCEEEEeeCCCcEEEEecC
Q 020798 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCL-----KTLIGHTNYVFCVNFNP--------QSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 79 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~i~~wd~~ 145 (321)
..+++++++|++++.|++|++||..+++.. ..+.+|.+.|.+++|+| ++++|++++.|++|++||++
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 344456678999999999999999887543 34578999999999997 78899999999999999999
Q ss_pred CCEEEEEEeCCCCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeec------------------------cCCC
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLI------------------------DDEN 200 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~------------------------~~~~ 200 (321)
++.+...+..|..++.+++|+|++. +|++++.|++|++||+++++...... ..+.
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 8888877788899999999999875 79999999999999998765432211 1233
Q ss_pred CCeEEEEEc-cCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCcee----------------EEEeEEEe-cCCeEEEE
Q 020798 201 PPVSFVKFS-PNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKY----------------CISSTFSV-TNGKYIVS 262 (321)
Q Consensus 201 ~~~~~~~~~-~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~~l~~ 262 (321)
..+..+.|. |+++.+++++.|+.+++||+..++....+..+..... .+...+.+ .++.++++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA 334 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence 456677776 7999999999999999999988766555543322111 11122222 35667888
Q ss_pred eCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 263 GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
|+.||.|++||+.+++.+....+|..+|++++|+|+|++||+++.| | +.+|++
T Consensus 335 gs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~--G-v~lvrL 387 (393)
T 4gq1_A 335 HSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEG--S-VLLTRL 387 (393)
T ss_dssp ETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESS--E-EEEEEE
T ss_pred ECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCC--C-eEEEEE
Confidence 9999999999999998887788899999999999999999999843 3 555554
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.7e-36 Score=261.58 Aligned_cols=247 Identities=19% Similarity=0.403 Sum_probs=207.5
Q ss_pred ccccccccEEEEEECCC-CCEEEEEeCCCcEEEEecCC----------cceeeeeecCcccEEEEEECCCCC-EEEEeeC
Q 020798 68 KFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLWDVPT----------ATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAF 135 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 135 (321)
....|.+.|.+++|+|+ +++|++++.+|.|++|++.+ ......+.+|...+.+++|+|++. +|++++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 44679999999999997 67999999999999999976 466777889999999999999988 9999999
Q ss_pred CCcEEEEecCCCEE-------EEEEeCCCCCeeEEEEcc-CCCEEEEEeCCCeEEEEeCCCC---ceeeeeccCCCCCeE
Q 020798 136 DETVRIWDVKTGKC-------LKVLPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTG---HCMKTLIDDENPPVS 204 (321)
Q Consensus 136 dg~i~~wd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~~~~ 204 (321)
||.|++||+..+.. ...+..|...|.+++|+| ++..|++++.|+.|++||++++ .....+ ..+...+.
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~ 281 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV-DAHTAEVN 281 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE-ECCSSCEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe-ecCCCCeE
Confidence 99999999987321 345668999999999999 6778999999999999999876 333333 35667899
Q ss_pred EEEEccCCC-EEEEEecCCeEEEEeCCC-CcEEEEEeccCCceeEEEeEEEecCC-eEEEEeCCCCeEEEEEccc-----
Q 020798 205 FVKFSPNGK-FILVGTLDNTLRLWNYST-GKILKTYTGHTNSKYCISSTFSVTNG-KYIVSGSEDSCVYLWELQS----- 276 (321)
Q Consensus 205 ~~~~~~~g~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~----- 276 (321)
+++|+|+++ ++++++.|+.|++||+++ ...+..+..|...+.++ .+ .+++ .+|++++.||.|++||+..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i--~~-sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV--QW-SPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE--EE-CSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE--EE-CCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 999999987 688999999999999987 56677888887765544 33 3555 5799999999999999987
Q ss_pred ---------ceEEEEecCCCCCeEEEEecCCCc-eEEEEeecCCccEEEccccc
Q 020798 277 ---------RKVVQKLEGHTDPVISVASHPTEN-IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 277 ---------~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~~~d~~~~i~iw~~~~ 320 (321)
.+++..+.+|...|++++|+|++. +|++++ .|+.|+||++..
T Consensus 359 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s--~dg~i~iw~~~~ 410 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS--EDNIMQVWQMAE 410 (430)
T ss_dssp CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE--TTSEEEEEEECH
T ss_pred CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE--CCCCEEEeEccc
Confidence 367778889999999999999999 788887 458999999853
No 95
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-35 Score=254.23 Aligned_cols=243 Identities=24% Similarity=0.428 Sum_probs=206.6
Q ss_pred ccccccEEEEEECCCCC-EEEEEeCCCcEEEEec----CCcc------eeeeeec----------CcccEEEEEECCCCC
Q 020798 70 TGHEQGVSDLVFSSDSR-FLVSASDDKTIRLWDV----PTAT------CLKTLIG----------HTNYVFCVNFNPQSN 128 (321)
Q Consensus 70 ~~h~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~ 128 (321)
..|...|.+++|+|+++ +|++++.|+.|++|++ .+++ ....+.. |...|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 45668999999999999 9999999999999999 8777 3443433 677999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee-------------
Q 020798 129 MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL------------- 195 (321)
Q Consensus 129 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~------------- 195 (321)
+|++++.||.|++|| .+++....+..|..+|.+++|+|+++.|++++.|+.+++||+++++....+
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 999999999999999 667778888899999999999999999999999999999999876543321
Q ss_pred ------------------------------------------ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc
Q 020798 196 ------------------------------------------IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233 (321)
Q Consensus 196 ------------------------------------------~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~ 233 (321)
...+...+..++|+|++++|++++.|+.|++||+++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN 280 (425)
T ss_dssp -----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS
T ss_pred cccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 11234568889999999999999999999999999998
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccE
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i 313 (321)
.+..+..|.....++. ..+++ ++++++.||.|++||+.+++.+..+..|..+|.+++|+|++++|++++ .|+.|
T Consensus 281 ~~~~~~~~~~~i~~~~---~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i 354 (425)
T 1r5m_A 281 SQNCFYGHSQSIVSAS---WVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF--MDGQV 354 (425)
T ss_dssp CSEEECCCSSCEEEEE---EETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE--TTSCE
T ss_pred cceEecCCCccEEEEE---ECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE--CCCeE
Confidence 8888887776654433 33677 899999999999999999999999999999999999999999999998 45899
Q ss_pred EEcccc
Q 020798 314 KIWTQE 319 (321)
Q Consensus 314 ~iw~~~ 319 (321)
++|+.+
T Consensus 355 ~i~~~~ 360 (425)
T 1r5m_A 355 NVYDLK 360 (425)
T ss_dssp EEEECH
T ss_pred EEEECC
Confidence 999985
No 96
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=261.97 Aligned_cols=243 Identities=14% Similarity=0.322 Sum_probs=199.6
Q ss_pred cccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc-----------eeeeeecCc------------ccEEEEEECCCC
Q 020798 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT-----------CLKTLIGHT------------NYVFCVNFNPQS 127 (321)
Q Consensus 71 ~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 127 (321)
.|.+.|.+++|+|++++|++|+.||.|++||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 357899999999999999999999999999998776 466788898 889999999998
Q ss_pred --CEEEEeeCCCcEEEEecCCCEEE---------------------------------------EE-EeCCCCCeeEEEE
Q 020798 128 --NMIVSGAFDETVRIWDVKTGKCL---------------------------------------KV-LPAHSDPVTAVDF 165 (321)
Q Consensus 128 --~~l~~~~~dg~i~~wd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 165 (321)
..|++++.|+.|++||+.++... .. ...|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 78999999999999998764431 12 3578999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCC-Cceeeee------ccCCCCCeEEEEEccCC-CEEEEEecCCeEEEEeCCCCcE---
Q 020798 166 NRDGTMIVTSSYDGLCRIWDAST-GHCMKTL------IDDENPPVSFVKFSPNG-KFILVGTLDNTLRLWNYSTGKI--- 234 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~------~~~~~~~~~~~~~~~~g-~~l~~~~~d~~i~i~d~~~~~~--- 234 (321)
+|+++.|+++ .|+.|++||++. .+....+ ...+...+..++|+|++ ++|++++.|+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 899999999984 3333322 34566789999999998 9999999999999999998876
Q ss_pred -EEEEeccCC------------ceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc-ceEEEEecCCCCC-----------
Q 020798 235 -LKTYTGHTN------------SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS-RKVVQKLEGHTDP----------- 289 (321)
Q Consensus 235 -~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h~~~----------- 289 (321)
+..+..+.. .+ ......+++++|++++. +.|++||+++ ++.+..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSI---SDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCE---EEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred eeeEeccCCCccccccccccCceE---EEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 677777654 33 33344578999999998 9999999987 7788888888532
Q ss_pred ----eEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 290 ----VISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 290 ----v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+..++|+|++++|++|+. |+.|++||.+.
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~--dg~v~iwd~~~ 373 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSY--NNFFRMFDRNT 373 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECS--TTEEEEEETTT
T ss_pred ccccceEEEECCCCCEEEEecc--CCEEEEEEcCC
Confidence 334999999999999984 58999999864
No 97
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=278.52 Aligned_cols=248 Identities=23% Similarity=0.424 Sum_probs=209.1
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC--CcceeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEE
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP--TATCLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIW 142 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~w 142 (321)
..+.+|.+.|++++|+|++++|++|+.||.|++||+. +.+....+.+|...|.+++|+|+ +++|++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 3567899999999999999999999999999999997 45667778899999999999988 8999999999999999
Q ss_pred ecCCCE--EEEEEeCCCCCeeEEEEccC--CCEEEEEeCCCeEEEEeCCCCcee-eeeccCCCCCeEEEEEcc-------
Q 020798 143 DVKTGK--CLKVLPAHSDPVTAVDFNRD--GTMIVTSSYDGLCRIWDASTGHCM-KTLIDDENPPVSFVKFSP------- 210 (321)
Q Consensus 143 d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~------- 210 (321)
|+.+++ ....+..|..+|.+++|+|+ +..+++++.||.|++||++++... ......+...+..+.|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999887 66777889999999999999 999999999999999999876322 222345667899999999
Q ss_pred ------CCCEEEEEecCCeEEEEeCCCC----cEEEEEeccCCceeEEEeEEEecC---CeEEEEeCCCCeEEEEEcccc
Q 020798 211 ------NGKFILVGTLDNTLRLWNYSTG----KILKTYTGHTNSKYCISSTFSVTN---GKYIVSGSEDSCVYLWELQSR 277 (321)
Q Consensus 211 ------~g~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~ 277 (321)
++.++++++.||.|++||++++ .....+.+|...+.++. ..++ +.+|++|+.||.|++||+.++
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~---~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA---WSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE---ECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEE---eccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 5899999999999999999876 45667777777655443 3466 899999999999999999886
Q ss_pred e-----EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 278 K-----VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 278 ~-----~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+ .+.....|...|++++|+|++++|++|+. ||.|++|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~--Dg~I~vwd~~ 284 (753)
T 3jro_A 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--DNKVTLWKEN 284 (753)
T ss_dssp SSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS--SSCEECCBCC
T ss_pred CCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC--CCEEEEEecC
Confidence 4 33344568899999999999999999984 5899999986
No 98
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-36 Score=255.95 Aligned_cols=245 Identities=15% Similarity=0.319 Sum_probs=206.6
Q ss_pred cccccccEEEEEECCC----CCEEEEEeCCCcEEEEecCCcceeeeeec-----CcccEEEEEECCC----CCEEEEeeC
Q 020798 69 FTGHEQGVSDLVFSSD----SRFLVSASDDKTIRLWDVPTATCLKTLIG-----HTNYVFCVNFNPQ----SNMIVSGAF 135 (321)
Q Consensus 69 ~~~h~~~i~~~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~ 135 (321)
..+|...|.+++|+|+ ...+++++.++.|++||+.+++.+..+.. |...+.+++|+|+ +.+|++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 3479999999999984 45667777777999999998876665543 5577999999998 668999999
Q ss_pred CCcEEEEecCCCEEEEEEeCCCCCeeEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeeec--cCCCCCeEEEEEccCC
Q 020798 136 DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTGHCMKTLI--DDENPPVSFVKFSPNG 212 (321)
Q Consensus 136 dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~g 212 (321)
||.|++||+.+++.+..+..|..+|.+++|+| ++..|++++.||.|++||+++++....+. ..+...+..++|+|++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 99999999999999999999999999999999 89999999999999999999887766652 4567789999999999
Q ss_pred CEEEEEecCCeEEEEeCCCCcEEEEEe----------------------------ccCCceeEEEeEEEecCCeEEEEeC
Q 020798 213 KFILVGTLDNTLRLWNYSTGKILKTYT----------------------------GHTNSKYCISSTFSVTNGKYIVSGS 264 (321)
Q Consensus 213 ~~l~~~~~d~~i~i~d~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (321)
++|++++.|+.|++||+++++.+..+. .|...+.++.. . +.++++++
T Consensus 174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~---~~~l~~~~ 248 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW--L---GDLILSKS 248 (366)
T ss_dssp SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE--E---TTEEEEEC
T ss_pred CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEE--c---CCEEEEEe
Confidence 999999999999999998765433222 25555555443 2 67999999
Q ss_pred CCCeEEEEEcccce--------------EEEEecCCCCCeEEEEecCC--CceEEEEeecCCccEEEccccc
Q 020798 265 EDSCVYLWELQSRK--------------VVQKLEGHTDPVISVASHPT--ENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 265 ~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~p~--~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.||.|++||+.+.+ .+..+.+|..+|.+++|+|+ +++|++|+ .|+.|++|+++.
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~--~dg~i~vwd~~~ 318 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN--QVGKLYVWDLEV 318 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC--TTSCEEEEECCS
T ss_pred cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe--cCCcEEEEECCC
Confidence 99999999998763 37788899999999999999 99999998 458999999864
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-37 Score=282.24 Aligned_cols=252 Identities=19% Similarity=0.298 Sum_probs=205.4
Q ss_pred eeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC--CCEEEEEeC
Q 020798 16 TQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD--SRFLVSASD 93 (321)
Q Consensus 16 ~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~--~~~l~~~~~ 93 (321)
...+.+|.+.|++++|+|+|++|++|+.||.|++|++... .......+.+|.+.|.+++|+|+ +++|++|+.
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~------~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~ 75 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 75 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT------EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC------CCccceeccCCcCceEEEEecCCCCCCEEEEEeC
Confidence 3567899999999999999999999999999999987521 12345677899999999999988 999999999
Q ss_pred CCcEEEEecCCcc--eeeeeecCcccEEEEEECCC--CCEEEEeeCCCcEEEEecCCCE--EEEEEeCCCCCeeEEEEcc
Q 020798 94 DKTIRLWDVPTAT--CLKTLIGHTNYVFCVNFNPQ--SNMIVSGAFDETVRIWDVKTGK--CLKVLPAHSDPVTAVDFNR 167 (321)
Q Consensus 94 d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~ 167 (321)
||.|++||+.+++ ....+.+|...|.+++|+|+ ++.+++++.||.|++||++++. ....+..|...|.+++|+|
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECC
T ss_pred CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecC
Confidence 9999999998886 56777889999999999999 9999999999999999998763 3445678999999999999
Q ss_pred -------------CCCEEEEEeCCCeEEEEeCCCCce---eeeeccCCCCCeEEEEEccC---CCEEEEEecCCeEEEEe
Q 020798 168 -------------DGTMIVTSSYDGLCRIWDASTGHC---MKTLIDDENPPVSFVKFSPN---GKFILVGTLDNTLRLWN 228 (321)
Q Consensus 168 -------------~~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~---g~~l~~~~~d~~i~i~d 228 (321)
++..+++++.||.|++||++++.. .......+...+.+++|+|+ ++++++++.||.|++||
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 588999999999999999987632 22233456778999999999 89999999999999999
Q ss_pred CCCCcE-----EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 229 YSTGKI-----LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 229 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
+.+++. +.....+...+.++ ...+++.++++|+.||.|++|++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~l---~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKFPDVLWRA---SWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp ESSSSSCCBCCBSSSSCCSSCCCCE---EECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCCCcceeEEeccCCCCCceEEE---EEcCCCCEEEEEcCCCEEEEEecCC
Confidence 987631 11122233433333 3357899999999999999999873
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.3e-36 Score=251.33 Aligned_cols=247 Identities=15% Similarity=0.268 Sum_probs=199.9
Q ss_pred cccccccccEEEEEECCCCCEE-EEEeC---CCcEEEEecCCcceeee-eecCcccEEEEEECCC---CCEEEEeeCCCc
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFL-VSASD---DKTIRLWDVPTATCLKT-LIGHTNYVFCVNFNPQ---SNMIVSGAFDET 138 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l-~~~~~---d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~---~~~l~~~~~dg~ 138 (321)
..+.+|...|.+++|+|+++.+ ++++. |+.|++||+.+++.... ..+|...|.+++|+|+ +++|++++.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 3456799999999999998655 45655 89999999998876443 3478899999999998 699999999999
Q ss_pred EEEEecCCCE-EEEEEeCCCCCeeEEEE------ccCCCEEEEEeCCCeEEEEeCCCCc-eeeeeccC---CCCCeEEEE
Q 020798 139 VRIWDVKTGK-CLKVLPAHSDPVTAVDF------NRDGTMIVTSSYDGLCRIWDASTGH-CMKTLIDD---ENPPVSFVK 207 (321)
Q Consensus 139 i~~wd~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~~~d~~~~~-~~~~~~~~---~~~~~~~~~ 207 (321)
|++||+.+++ ....+..|...|.+++| +|+++.|++++.|+.|++||++++. ....+... ....+..++
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 9999999887 77888899999999954 6889999999999999999998876 34443221 133677777
Q ss_pred ----EccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEec---CCeEEEEeCCCCeEEEEEcccceEE
Q 020798 208 ----FSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT---NGKYIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 208 ----~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
|+|+++++++++.|+.|++||+++++.... ..+.....++ ...+ ++.+|++++.||.|++||+++++.+
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~---~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSL---EFDRKDISMNKLVATSLEGKFHVFDMRTQHPT 247 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEE---EESCSSSSCCEEEEEESTTEEEEEEEEEEETT
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEE---EcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc
Confidence 788999999999999999999999887554 3444444333 3345 7899999999999999999887654
Q ss_pred EEe-----cCCCCCeEEEEecCCCc-eEEEEeecCCccEEEcccc
Q 020798 281 QKL-----EGHTDPVISVASHPTEN-IIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 281 ~~~-----~~h~~~v~~~~~~p~~~-~l~s~~~d~~~~i~iw~~~ 319 (321)
..+ .+|..+|.+++|+|+++ +|++|+ .|+.|++|+++
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~ 290 (357)
T 3i2n_A 248 KGFASVSEKAHKSTVWQVRHLPQNRELFLTAG--GAGGLHLWKYE 290 (357)
T ss_dssp TEEEEEEEECCSSCEEEEEEETTEEEEEEEEE--TTSEEEEEEEE
T ss_pred cceeeeccCCCcCCEEEEEECCCCCcEEEEEe--CCCcEEEeecC
Confidence 444 38999999999999998 899988 45899999986
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-35 Score=240.70 Aligned_cols=242 Identities=25% Similarity=0.444 Sum_probs=206.0
Q ss_pred CcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEe
Q 020798 64 SPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWD 143 (321)
Q Consensus 64 ~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd 143 (321)
.....+.+|.+.|.+++| +++++|++++.||.|++||+.+++....+..|...+.+++|+|++++|++++.|+.|++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 456678899999999999 9999999999999999999999888888889999999999999999999999999999999
Q ss_pred cCCC---EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEcc-CCCEEEEEe
Q 020798 144 VKTG---KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSP-NGKFILVGT 219 (321)
Q Consensus 144 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~ 219 (321)
+... +....+..|...+.+++| +++.+++++.|+.+++|| .++....+ ..+...+..+.+.| +++++++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL-QAHNASVWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE-ECCSSCEEEEEEEETTTTEEEEEE
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec-ccCCCceeEEEEccCCCCEEEEEE
Confidence 8654 556677889999999999 567999999999999999 33434333 34567788899988 899999999
Q ss_pred cCCeEEEEeCCCCcEEEEEec-cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCC
Q 020798 220 LDNTLRLWNYSTGKILKTYTG-HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPT 298 (321)
Q Consensus 220 ~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~ 298 (321)
.|+.|++|| ..+.+..+.. +.....++ ...+++. +++++.||.|++||+++++.+..+.+|..+|.+++|+|+
T Consensus 163 ~d~~i~i~d--~~~~~~~~~~~~~~~i~~~---~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 163 ADKTIKLWQ--NDKVIKTFSGIHNDVVRHL---AVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp TTSCEEEEE--TTEEEEEECSSCSSCEEEE---EEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred CCCCEEEEe--cCceEEEEeccCcccEEEE---EEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence 999999999 4556666765 55544333 3346777 889999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCccEEEccccc
Q 020798 299 ENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 299 ~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+ .|++++ .|+.|++||.+.
T Consensus 237 ~-~l~~~~--~dg~v~iwd~~~ 255 (313)
T 3odt_A 237 G-DIVSCG--EDRTVRIWSKEN 255 (313)
T ss_dssp S-CEEEEE--TTSEEEEECTTT
T ss_pred C-CEEEEe--cCCEEEEEECCC
Confidence 9 688887 458999999864
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.1e-35 Score=252.93 Aligned_cols=258 Identities=24% Similarity=0.418 Sum_probs=210.2
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcE
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
.+.+|...|++++|+|+|++||+|+.|+.|++|++.. ...+..+.+|...+.++.++ +++|++|+.|+.+
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~--------~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i 211 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--------QKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHI 211 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT--------TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEE
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC--------CcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCce
Confidence 3457888999999999999999999999999998754 24567788999999988874 6799999999999
Q ss_pred EEEecCCc-ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE----EEEEEeCCCCCeeEEEEccCCC-E
Q 020798 98 RLWDVPTA-TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK----CLKVLPAHSDPVTAVDFNRDGT-M 171 (321)
Q Consensus 98 ~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~ 171 (321)
++||.... ..+..+.+|...+..+.++|+++++++++.|+.+++|+..+++ .+.....|...|.+++|+|.+. .
T Consensus 212 ~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 212 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTE
T ss_pred eEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccE
Confidence 99998765 4456778999999999999999999999999999999998764 3445667889999999999765 5
Q ss_pred EEEE--eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe--cCCeEEEEeCCCCcEEEEEeccCCceeE
Q 020798 172 IVTS--SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT--LDNTLRLWNYSTGKILKTYTGHTNSKYC 247 (321)
Q Consensus 172 l~~~--~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 247 (321)
++++ +.|+.|++||++++.+...+.. ...+..+.|+|+++.+++++ .|+.|++||+.+++.+..+.+|...+.+
T Consensus 292 la~~~gs~D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~ 369 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 369 (420)
T ss_dssp EEEEECTTTCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEeecCCCEEEEEeCCccccceeecc--ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 5543 4799999999999987776643 34678899999999988765 6899999999999999999999887655
Q ss_pred EEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCe
Q 020798 248 ISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV 290 (321)
Q Consensus 248 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v 290 (321)
+. ..++|++|++|+.|++|+|||+.......+.+.+...+
T Consensus 370 l~---~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~ 409 (420)
T 4gga_A 370 LT---MSPDGATVASAAADETLRLWRCFELDPARRREREKASA 409 (420)
T ss_dssp EE---ECTTSSCEEEEETTTEEEEECCSCSSCC----------
T ss_pred EE---EcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCc
Confidence 43 35799999999999999999998765555554444433
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-35 Score=254.21 Aligned_cols=257 Identities=18% Similarity=0.307 Sum_probs=210.2
Q ss_pred eeccCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCC
Q 020798 17 QTLNGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDD 94 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d 94 (321)
..+.+|...|++++|+| ++++|++|+.|+.|++|++....... ....++..+.+|...|.+++|+|++ ++|++++.|
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL-PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS-CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc-ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 45679999999999999 99999999999999999986532211 1124567788999999999999998 699999999
Q ss_pred CcEEEEecCCcceeeee--ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE-eCCCCC-eeEEEEccCCC
Q 020798 95 KTIRLWDVPTATCLKTL--IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL-PAHSDP-VTAVDFNRDGT 170 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~~~-v~~~~~~~~~~ 170 (321)
+.|++||+.+++....+ .+|...|.+++|+|++++|++++.|+.|++||+++++.+..+ ..|... +..+.|+|++.
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 99999999999988888 789999999999999999999999999999999999988888 677765 89999999999
Q ss_pred EEEEE---eCCCeEEEEeCCCCce-eeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcE-EEEEeccC--
Q 020798 171 MIVTS---SYDGLCRIWDASTGHC-MKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKI-LKTYTGHT-- 242 (321)
Q Consensus 171 ~l~~~---~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~-~~~~~~~~-- 242 (321)
+++++ +.|+.|++||++++.. .......+...+..++|+|+++++++++ .|+.|++||+.+++. +..+..+.
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~ 313 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSK 313 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCS
T ss_pred EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccC
Confidence 99988 7899999999987654 2333334556788999999999997554 799999999998873 44444433
Q ss_pred CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceE
Q 020798 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV 279 (321)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (321)
.....+ ...+++.++++ .++.+++|++.+++.
T Consensus 314 ~~v~~~---~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 314 ESQRGM---GYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp SCCSEE---EECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred Ccccce---EEeccccccee--cceeEEEEEcCCCcE
Confidence 444333 23467777654 567999999987653
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.4e-35 Score=247.03 Aligned_cols=285 Identities=12% Similarity=0.178 Sum_probs=205.9
Q ss_pred CCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEE-
Q 020798 10 FRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFL- 88 (321)
Q Consensus 10 ~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l- 88 (321)
+...+....+++|...|++++|+|||++|++|+.++ +++|++.... . ....+..++..+.+.++++.+
T Consensus 6 ~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~ 74 (355)
T 3vu4_A 6 MITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA--------H--IMSQEMRHLSKVRMLHRTNYVA 74 (355)
T ss_dssp -------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE--------E--EEEEECSCCCEEEECTTSSEEE
T ss_pred ccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc--------e--eeeeecCCeEEEEEcCCCCEEE
Confidence 333444456688999999999999999999998775 6799865321 1 112222357888899988877
Q ss_pred EEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCCCCCeeEEEEcc
Q 020798 89 VSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAHSDPVTAVDFNR 167 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~ 167 (321)
++++.|+.|++||+.+++++..+. +...+.++.++++. ++++ .++.|++||+.++ +.+..+.. +...+++++
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~ 147 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN 147 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET
T ss_pred EEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc
Confidence 567888999999999998877776 66789999998764 4443 4789999999887 55554443 444566777
Q ss_pred CCCEEEE--EeCCCeEEEEeCCCCce--------------e-eeeccCCCCCeEEEEEccCCCEEEEEecCCe-EEEEeC
Q 020798 168 DGTMIVT--SSYDGLCRIWDASTGHC--------------M-KTLIDDENPPVSFVKFSPNGKFILVGTLDNT-LRLWNY 229 (321)
Q Consensus 168 ~~~~l~~--~~~dg~i~~~d~~~~~~--------------~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~-i~i~d~ 229 (321)
..+++ ++.+|.|++||++++.. . ......|...|.+++|+|+|++|++++.|++ |++||+
T Consensus 148 --~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 --GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp --TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEET
T ss_pred --cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 55655 57899999999987541 0 2334567788999999999999999999998 999999
Q ss_pred CCCcEEEEEe-c-cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceE--EEEec---------------------
Q 020798 230 STGKILKTYT-G-HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV--VQKLE--------------------- 284 (321)
Q Consensus 230 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~--------------------- 284 (321)
++++.+..+. + |...+.++ .+.+++.+|++++.|+.|++||++.... ...+.
T Consensus 226 ~~~~~~~~~~~g~h~~~v~~~---~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T 3vu4_A 226 EDGVLVREFRRGLDRADVVDM---KWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSV 302 (355)
T ss_dssp TTCCEEEEEECTTCCSCEEEE---EECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCC
T ss_pred CCCcEEEEEEcCCCCCcEEEE---EECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEecc
Confidence 9999999997 4 66655443 3457899999999999999999976431 11111
Q ss_pred CCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 285 GHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 285 ~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+..+...++|+|++++|++++ .||.+++|++.
T Consensus 303 ~~~~~~~~~a~~~d~~~l~~~~--~dg~~~~~~~~ 335 (355)
T 3vu4_A 303 DKHVRGCKIAWISESSLVVVWP--HTRMIETFKVV 335 (355)
T ss_dssp CTTCCCCEEEESSSSEEEEEET--TTTEEEEEEEE
T ss_pred CCCCCceEEEEeCCCCEEEEEe--CCCeEEEEEEE
Confidence 1122347799999999999998 46899999864
No 105
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3e-35 Score=249.95 Aligned_cols=245 Identities=14% Similarity=0.245 Sum_probs=197.7
Q ss_pred cccccccccccEEEEEECCCC-CEEEEEeCCCcEEEEecCCcceeeeee--cCcccEEEEEECC-CCCEEEEeeCCCcEE
Q 020798 65 PLQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLI--GHTNYVFCVNFNP-QSNMIVSGAFDETVR 140 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~dg~i~ 140 (321)
....+.+|...|.+++|+|++ ++|++|+.|+.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 345667899999999999999 899999999999999999887665554 6999999999999 678999999999999
Q ss_pred EEecCCCEEEEEEeCC---CCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-EEE
Q 020798 141 IWDVKTGKCLKVLPAH---SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-FIL 216 (321)
Q Consensus 141 ~wd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~ 216 (321)
+||+++. ....+..+ ...+.+++|+|+++.+++++.|+.|++||++ ++....+. .+...+..++|+|+++ +++
T Consensus 145 iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~-~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 145 LRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK-LHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEE-CSSSCEEEEEECSSCTTEEE
T ss_pred EEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEec-cCCCcEEEEEECCCCCCEEE
Confidence 9999864 44444433 4789999999999999999999999999995 44454443 4567899999999999 899
Q ss_pred EEecCCeEEEEeCCC----CcEEEEEeccCCceeEEEeEEEec-CCeEEEEeCCCCeEEEEEcccceEEEEecCCC----
Q 020798 217 VGTLDNTLRLWNYST----GKILKTYTGHTNSKYCISSTFSVT-NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT---- 287 (321)
Q Consensus 217 ~~~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~---- 287 (321)
+++.|+.|++||+++ +..+..+ +|...+.++ ...+ ++.+|++++.|+.|++||+++++.+..+.+|.
T Consensus 222 s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~---~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 222 TSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAA---YFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEE---EECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred EEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEE---EEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 999999999999987 5666666 465554443 3346 89999999999999999999877655555442
Q ss_pred -------------CCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 288 -------------DPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 288 -------------~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..+..++|+|++++ +|+ .|+.|++||.+.
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s--~d~~i~iwd~~~ 339 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLN--DKRTIDIYDANS 339 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTT--CCCCEEEEETTT
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccC--CCCeEEEEecCC
Confidence 23444666666666 555 468999999853
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-36 Score=253.67 Aligned_cols=268 Identities=12% Similarity=0.099 Sum_probs=202.3
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC-----
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP----- 103 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~----- 103 (321)
..+.+++++|++|+.|+.|++|++.... .+..+. ...|.++.|+|+ +++++.|+.|++|+..
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~--------~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~ 108 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSK--------TITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITI 108 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSS--------CEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCc--------EEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEE
Confidence 3456788999999999999999986422 222222 456777888887 9999999999999765
Q ss_pred ----Ccceeeee-ecCcccEEEEEECC--CCCEEEEeeCCCcEEEEecCCCEEEEEEe-CCCCCeeEEEEccCCCEEEEE
Q 020798 104 ----TATCLKTL-IGHTNYVFCVNFNP--QSNMIVSGAFDETVRIWDVKTGKCLKVLP-AHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 104 ----~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 175 (321)
+.+.+... .+|...|.+++++| +++++++++.||.|++||+++++...... .+...+.+++|+|++.++++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 34433333 36778899999999 99999999999999999999988866553 455689999999999999999
Q ss_pred eCCCeEEEEeCCCCcee-eeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec---cCCceeEEEeE
Q 020798 176 SYDGLCRIWDASTGHCM-KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG---HTNSKYCISST 251 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~ 251 (321)
+.||.|++||+++++.. ..+...+...+..++|+|+|.+|++++ ++.|++||+++++.+..+.. +...... ...
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~ 266 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGT-VTY 266 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CC-EEE
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccc-eEE
Confidence 99999999999998876 444433678899999999999999999 55999999998876544432 1111111 123
Q ss_pred EEecCCeEEEEeCC-CCeEEEEEcccceEEEEecCCCCCeEEEEecC---CCceEEEEeecCCccEEEcc
Q 020798 252 FSVTNGKYIVSGSE-DSCVYLWELQSRKVVQKLEGHTDPVISVASHP---TENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 252 ~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p---~~~~l~s~~~d~~~~i~iw~ 317 (321)
...+++++|++++. |+.|++|++......... .++..++|+| +...+++++.| +.+.++-
T Consensus 267 ~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d--~~~~~~~ 330 (343)
T 3lrv_A 267 DIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGD--GGIAAIL 330 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEET--TEEEEEE
T ss_pred EECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecC--CceEEEE
Confidence 34578999999888 999999999665432222 5678888888 78888888754 5666653
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.6e-35 Score=247.54 Aligned_cols=241 Identities=13% Similarity=0.163 Sum_probs=202.1
Q ss_pred cccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc---eeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEec
Q 020798 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT---CLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDV 144 (321)
Q Consensus 69 ~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~ 144 (321)
..+|...|.+++|+|++++|++++.|+.|++|++.++. ......+|...|.+++|+|+++ +|++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 34789999999999999999999999999999998776 3455668999999999999999 9999999999999999
Q ss_pred -CCCEEEEEEeC--CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC---------CceeeeeccCCCCCeEEEEEccCC
Q 020798 145 -KTGKCLKVLPA--HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST---------GHCMKTLIDDENPPVSFVKFSPNG 212 (321)
Q Consensus 145 -~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~g 212 (321)
.+++. ..+.. |...|.+++|+| +..+++++.|+.|++||+++ +++...+. +...+..++|+|++
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEEEEECSSE
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCceEEEEecCCc
Confidence 77754 56677 999999999999 99999999999999999886 55444432 56678999999987
Q ss_pred CEEEEEecCCeEEEEeCCC-CcE--EEEEeccCCceeEEEeEEEec-CCeEEEEeCCCCeEEEEEcccc------eEEEE
Q 020798 213 KFILVGTLDNTLRLWNYST-GKI--LKTYTGHTNSKYCISSTFSVT-NGKYIVSGSEDSCVYLWELQSR------KVVQK 282 (321)
Q Consensus 213 ~~l~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~------~~~~~ 282 (321)
+++++.|+.|++||+++ +.. ......+.....+ ....+ ++.++++++.||.|++|++... +....
T Consensus 163 --l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~---i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 163 --LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRD---VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp --EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEE---EEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred --EEEEeCCCeEEEEECCccccccceeeecCCCCceeE---EEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 88999999999999987 542 3333344444333 33446 7899999999999999999876 66777
Q ss_pred ecCCCC---------CeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 283 LEGHTD---------PVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 283 ~~~h~~---------~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+..|.. +|.+++|+|++++|++|+ .|+.|++||.+.
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~vwd~~~ 282 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG--SDGIISCWNLQT 282 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE--TTSCEEEEETTT
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEec--CCceEEEEcCcc
Confidence 777755 999999999999999998 458999999864
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.8e-35 Score=252.46 Aligned_cols=257 Identities=23% Similarity=0.383 Sum_probs=210.4
Q ss_pred eeccCCcccEEEEEECCC-CCEEEEecCCceEEEeeccccCCCCC--CCCCcccccccccccEEEEEECCCCC-EEEEEe
Q 020798 17 QTLNGHLRAISSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDS--TPPSPLQKFTGHEQGVSDLVFSSDSR-FLVSAS 92 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~--~~~~~~~~~~~h~~~i~~~~~~~~~~-~l~~~~ 92 (321)
..+.+|.+.|++++|+|+ +++||+++.+|.|++|++........ ....++..+.+|...|.+++|+|+++ +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445689999999999997 68999999999999999875322111 12345677889999999999999988 999999
Q ss_pred CCCcEEEEecCCcce-------eeeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecCCC---EEEEEEeCCCCCee
Q 020798 93 DDKTIRLWDVPTATC-------LKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVKTG---KCLKVLPAHSDPVT 161 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~v~ 161 (321)
.||.|++|++..+.. ...+.+|...|.+++|+| ++..|++++.|+.|++||++++ +....+..|...|.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987321 345668999999999999 6788999999999999999876 46667778999999
Q ss_pred EEEEccCCC-EEEEEeCCCeEEEEeCCCCc-eeeeeccCCCCCeEEEEEccCCC-EEEEEecCCeEEEEeCCC-------
Q 020798 162 AVDFNRDGT-MIVTSSYDGLCRIWDASTGH-CMKTLIDDENPPVSFVKFSPNGK-FILVGTLDNTLRLWNYST------- 231 (321)
Q Consensus 162 ~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~d~~i~i~d~~~------- 231 (321)
+++|+|++. ++++++.||.|++||+++.. .+..+ ..+...+..++|+|+++ +|++++.|+.|++||+..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 999999987 68899999999999998743 33333 44667899999999985 688999999999999976
Q ss_pred -------CcEEEEEeccCCceeEEEeEEEecCCe-EEEEeCCCCeEEEEEcccc
Q 020798 232 -------GKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSR 277 (321)
Q Consensus 232 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~ 277 (321)
.+++..+.+|...+..+ ...+++. +|++++.||.|++|++...
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~---~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDF---SWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEE---EECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccccCCcceEEEcCCCCCCceEE---EECCCCCCEEEEEECCCCEEEeEcccc
Confidence 35677777776655443 3346677 8999999999999999754
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.8e-34 Score=246.35 Aligned_cols=293 Identities=13% Similarity=0.180 Sum_probs=232.1
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
....+..+ ..+.+++|+|++.++++++.++.|.+|++...... ...+...+.+|...|.+++|+++++++++++.|
T Consensus 115 ~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d 190 (433)
T 3bws_A 115 FISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTV---RLSPPEKYKKKLGFVETISIPEHNELWVSQMQA 190 (433)
T ss_dssp EEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEE---EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG
T ss_pred EEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEe---eecCcccccccCCceeEEEEcCCCEEEEEECCC
Confidence 34444444 34558999998888899999999999997643211 001112456888999999999999999999999
Q ss_pred CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEE
Q 020798 95 KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV 173 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 173 (321)
+.|++||+.+++....+..|...+.+++|+|+++.++ +++.++.|++||+++++....+..+ ..+.+++|+|+++.++
T Consensus 191 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELY 269 (433)
T ss_dssp TEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEE
T ss_pred CEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEE
Confidence 9999999999988888888999999999999999875 4558999999999999887777654 4589999999999988
Q ss_pred EEe--------CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEE-EEEecCCeEEEEeCCCCcEEEEEeccCCc
Q 020798 174 TSS--------YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFI-LVGTLDNTLRLWNYSTGKILKTYTGHTNS 244 (321)
Q Consensus 174 ~~~--------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 244 (321)
+++ .|+.|++||+++++...... +...+..++|+|+++.+ ++++.++.|++||+.+++.+..+.. ...
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~ 346 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDKEKLIDTIG--PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-FDK 346 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTTTEEEEEEE--EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-SSS
T ss_pred EEECCCCccccCCCeEEEEECCCCcEEeecc--CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-CCC
Confidence 887 48899999999887655542 22357789999999765 5557899999999999988877753 233
Q ss_pred eeEEEeEEEecCCeEEEEeCC---------------CCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecC
Q 020798 245 KYCISSTFSVTNGKYIVSGSE---------------DSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~---------------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
.. .....++++++++++. ||.|++||+.+++.+..+..+ ..+.+++|+|++++|++++. .
T Consensus 347 ~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~-~ 421 (433)
T 3bws_A 347 PN---TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDF-L 421 (433)
T ss_dssp EE---EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEET-T
T ss_pred CC---eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEEC-C
Confidence 22 2334478887777765 579999999999988888764 57899999999999988764 3
Q ss_pred CccEEEccccc
Q 020798 310 DRTVKIWTQEK 320 (321)
Q Consensus 310 ~~~i~iw~~~~ 320 (321)
|+.|++|+++.
T Consensus 422 d~~i~v~~~~~ 432 (433)
T 3bws_A 422 DHQIRVYRRDG 432 (433)
T ss_dssp TTEEEEEEETT
T ss_pred CCeEEEEEecC
Confidence 68999999863
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-35 Score=252.47 Aligned_cols=275 Identities=13% Similarity=0.070 Sum_probs=205.3
Q ss_pred CCccccccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEE
Q 020798 2 SSDQSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVF 81 (321)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 81 (321)
|.|.+++ + .+..+.+++|...|.+++|+|+| .++.+.+|+... .....+ .|...|.+++|
T Consensus 34 s~D~TV~--d-~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~---------~~~~~~-~~~~~V~~vaw 93 (588)
T 2j04_A 34 FPDISIG--Q-PKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQ---------NGLLNS-QPVCYPRVCKP 93 (588)
T ss_dssp SSSEEEE--E-ECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCS---------SCSSTT-SCSCCEEEEEE
T ss_pred cCCceee--c-ccccceecCCCccEEEEEECCCC-------CcceEEEEeCCC---------ceEeec-CCCCcEEEEEE
Confidence 3444555 2 23335568999999999999999 355544443211 111222 45788999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcc-----cEEEEEECCCCCEEEEeeCCCcEEEEecCCCE-------E
Q 020798 82 SSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTN-----YVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK-------C 149 (321)
Q Consensus 82 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-------~ 149 (321)
+|+|++||+++.||.|++||... ++..+. |.. .+.+++|+|+|++|++|+.||+|++||++++. .
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~ 170 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF 170 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Confidence 99999999999999999999644 455555 554 49999999999999999999999999998874 2
Q ss_pred EEEE----eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCcee---eeeccCCCCCeEEEEEccCCCEEEEEecCC
Q 020798 150 LKVL----PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM---KTLIDDENPPVSFVKFSPNGKFILVGTLDN 222 (321)
Q Consensus 150 ~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~ 222 (321)
+..+ .+|...|.+++|+|+| +++++.|+++++||+.++... ..+...+...|..++|+ |+.+++++ ++
T Consensus 171 l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~ 245 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG 245 (588)
T ss_dssp EEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS
T ss_pred eeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC
Confidence 4555 5677899999999999 889999999999999876632 23333555678999999 68888886 69
Q ss_pred eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce-----------------------E
Q 020798 223 TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK-----------------------V 279 (321)
Q Consensus 223 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----------------------~ 279 (321)
.|++||+.+++......+|......+.. ...+++..+++++.||+ ++|....-. .
T Consensus 246 tIkLWd~~~~~~~~~~~gh~~~V~~va~-~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~ 323 (588)
T 2j04_A 246 YVHKIDLKNYSISSLKTGSLENFHIIPL-NHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNE 323 (588)
T ss_dssp EEEEEETTTTEEEEEECSCCSCCCEEEE-TTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTS
T ss_pred eEEEEECCCCeEEEEEcCCCceEEEEEe-eeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCc
Confidence 9999999988774444477776655432 01478999999999999 999873211 1
Q ss_pred EEEecCCCCCeEEEEecCCCceEEEEee
Q 020798 280 VQKLEGHTDPVISVASHPTENIIASGAL 307 (321)
Q Consensus 280 ~~~~~~h~~~v~~~~~~p~~~~l~s~~~ 307 (321)
+..+++ ...|.+++|+|+|..+|+++.
T Consensus 324 l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 324 FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 111222 335899999999999999874
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.4e-34 Score=245.46 Aligned_cols=234 Identities=33% Similarity=0.638 Sum_probs=206.7
Q ss_pred cccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE
Q 020798 69 FTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK 148 (321)
Q Consensus 69 ~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 148 (321)
..+|...|.++.+ ++++|++|+.||.|++||+.+++....+.+|...|.++++ +++.|++|+.||.|++||+.+++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 3456778998887 7899999999999999999999999999999999999988 67899999999999999999999
Q ss_pred EEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceee--eeccCCCCCeEEEEEccCCCEEEEEecCCeEEE
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMK--TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRL 226 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i 226 (321)
.+..+..|...|.+++|++ ..+++++.||.|++||++++.... .....+...+..+.+ +++++++++.|+.|++
T Consensus 205 ~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 9999999999999999974 589999999999999998776442 334556677888888 7889999999999999
Q ss_pred EeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 227 WNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 227 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
||+++++.+..+.+|.....++.. ++.++++|+.||.|++||+++++.+..+.+|..+|.+++| ++.+|++|+
T Consensus 281 wd~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~ 353 (435)
T 1p22_A 281 WNTSTCEFVRTLNGHKRGIACLQY-----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 353 (435)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEE-----ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEE
T ss_pred EECCcCcEEEEEcCCCCcEEEEEe-----CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEe
Confidence 999999999999988877655432 4789999999999999999999999999999999999999 688999998
Q ss_pred ecCCccEEEcccc
Q 020798 307 LDNDRTVKIWTQE 319 (321)
Q Consensus 307 ~d~~~~i~iw~~~ 319 (321)
. ||.|++||.+
T Consensus 354 ~--dg~i~vwd~~ 364 (435)
T 1p22_A 354 Y--DGKIKVWDLV 364 (435)
T ss_dssp T--TSCEEEEEHH
T ss_pred C--CCcEEEEECC
Confidence 4 5899999974
No 112
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.2e-35 Score=251.09 Aligned_cols=248 Identities=17% Similarity=0.270 Sum_probs=193.8
Q ss_pred ccccccccEEEEEECC-CCCEEEEEeCCCcEEEEecCCcce--eeeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEe
Q 020798 68 KFTGHEQGVSDLVFSS-DSRFLVSASDDKTIRLWDVPTATC--LKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWD 143 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd 143 (321)
...+|...|++|+|+| ++++||+|+.||.|+|||+.+++. ...+.+|...|.+++|+| ++++|++++.||+|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 4457888999999999 467899999999999999987653 344568999999999998 678999999999999999
Q ss_pred cCCCEEEEEEeC--CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-EEEEEec
Q 020798 144 VKTGKCLKVLPA--HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-FILVGTL 220 (321)
Q Consensus 144 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~ 220 (321)
++++........ +...+.+++|+|++.+|++++.||.|++||++.. .+..+ ..+...|..++|+|++. ++++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~-~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNL-RMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCS-BCCSSCEEEEEECTTCSSEEEEEET
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEE-ecccceEEeeeecCCCceEEEEecC
Confidence 987654443333 3345788999999999999999999999998754 33333 35667899999999876 6778999
Q ss_pred CCeEEEEeCCCCcEEEEE---eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCC------CeE
Q 020798 221 DNTLRLWNYSTGKILKTY---TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD------PVI 291 (321)
Q Consensus 221 d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~------~v~ 291 (321)
|+.|++||+++.+....+ .+|...+.+ ..+.+++.+|++++.||.|++||+.+++....+..|.. .+.
T Consensus 272 d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~---~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFLYSLPHRHPVNA---ACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp TSBCCEEETTTCCSSSCCSBCCBCSSCEEE---CCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred cceeeEEecccccccceEEEeeeccccccc---eeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 999999999876543332 345554433 33457899999999999999999999887776666542 234
Q ss_pred EEEecCCCceEEEEeec----------CCccEEEccccc
Q 020798 292 SVASHPTENIIASGALD----------NDRTVKIWTQEK 320 (321)
Q Consensus 292 ~~~~~p~~~~l~s~~~d----------~~~~i~iw~~~~ 320 (321)
.+.|+|++..+++++.+ +++.|++||.+.
T Consensus 349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~ 387 (435)
T 4e54_B 349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS 387 (435)
T ss_dssp BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence 56788888887777532 235799999754
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.5e-34 Score=238.81 Aligned_cols=252 Identities=18% Similarity=0.317 Sum_probs=201.0
Q ss_pred CCCcccccccccccEEEEEECCC---CCEEEEEeCCCcEEEEecCC-ccee-eeeecCcccEEEEEECCCCCEEEEeeCC
Q 020798 62 PPSPLQKFTGHEQGVSDLVFSSD---SRFLVSASDDKTIRLWDVPT-ATCL-KTLIGHTNYVFCVNFNPQSNMIVSGAFD 136 (321)
Q Consensus 62 ~~~~~~~~~~h~~~i~~~~~~~~---~~~l~~~~~d~~i~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d 136 (321)
+...+..+.+|...|.+++|+|+ |++|++|+.||.|++||+.+ +... ..+.+|...|.+++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 44556778899999999999999 59999999999999999987 4444 6778899999999999999999999999
Q ss_pred CcEEEEecCCCEEEEEEeCCCCCeeEEEE--ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCE
Q 020798 137 ETVRIWDVKTGKCLKVLPAHSDPVTAVDF--NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKF 214 (321)
Q Consensus 137 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 214 (321)
|.|++||+++++... +..|..+|.+++| +|++..+++++.|+.|++||+++++....+... ..+..+.+ ....
T Consensus 108 g~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~~~--~~~~ 182 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP--ERCYCADV--IYPM 182 (368)
T ss_dssp SEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS--SCEEEEEE--ETTE
T ss_pred CcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC--CCceEEEe--cCCe
Confidence 999999999988766 4568999999999 899999999999999999999988776665432 23444444 4558
Q ss_pred EEEEecCCeEEEEeCCCCcEEEEEec--cCCceeEEEeEEEec-CCeEEEEeCCCCeEEEEEcccc---eEEEEecCCCC
Q 020798 215 ILVGTLDNTLRLWNYSTGKILKTYTG--HTNSKYCISSTFSVT-NGKYIVSGSEDSCVYLWELQSR---KVVQKLEGHTD 288 (321)
Q Consensus 215 l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~h~~ 288 (321)
+++++.++.+.+|++........... ......++....... ....+++++.||.|++||+... +.+..+.+|..
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 88999999999999987654433322 122223333222111 1234999999999999999876 45667777765
Q ss_pred ------------CeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 289 ------------PVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 289 ------------~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+|.+++|+|++++|++|+. |+.|++||.+.
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~--dg~i~iwd~~~ 304 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGS--DGRFSFWDKDA 304 (368)
T ss_dssp C----CCCEEECCEEEEEECTTTCCEEEEET--TSCEEEEETTT
T ss_pred ccccccccccccceEEEEEecCCCEEEEEcc--CCeEEEEECCC
Confidence 7999999999999999984 58999999864
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.5e-34 Score=243.22 Aligned_cols=283 Identities=21% Similarity=0.383 Sum_probs=198.5
Q ss_pred cCCcccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC---CEEEEEeCCC
Q 020798 20 NGHLRAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS---RFLVSASDDK 95 (321)
Q Consensus 20 ~~h~~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~---~~l~~~~~d~ 95 (321)
.+|...|.+++|+| ++++|++++.|+.+++|++... .....+ .+...+.++.+++.+ .++++++.|+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--------QTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--------EEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--------ccceec-cCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 46999999999999 7889999999999999987642 222223 367789999999854 4999999999
Q ss_pred cEEEEecCCcceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCE-EEEEE---------------eCCCC
Q 020798 96 TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGK-CLKVL---------------PAHSD 158 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~-~~~~~---------------~~~~~ 158 (321)
.|++||+.+++....+.+|...+.+++|+|++. .|++++.||.|++||++++. ....+ ..|..
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG 246 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC
Confidence 999999999988888999999999999999998 58899999999999998764 22332 46788
Q ss_pred CeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC----CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE
Q 020798 159 PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD----ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI 234 (321)
Q Consensus 159 ~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~ 234 (321)
.|.+++|+|+++.+++++.|+.+++||+++++........ .............+..+++++.++.|++||+.+++.
T Consensus 247 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 326 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ 326 (408)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE
T ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc
Confidence 9999999999999999999999999999987654332211 111122222333455677778899999999999999
Q ss_pred EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCC-ceEEEEeecCCccE
Q 020798 235 LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE-NIIASGALDNDRTV 313 (321)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~~~d~~~~i 313 (321)
+..+.+|...+.++ ...+++++|++|+.||.|++||+.+.+.+.....+. ....+.|.. ..+.+.+ .++.+
T Consensus 327 ~~~~~~~~~~v~~~---~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~ 398 (408)
T 4a11_B 327 ITMLKGHYKTVDCC---VFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDAWSSSD--EEGGT 398 (408)
T ss_dssp EEEECCCSSCEEEE---EEETTTTEEEEEETTSCEEEEEECC--------------------------------------
T ss_pred eeeeccCCCeEEEE---EEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE---eccccccccceeecccC--ccCce
Confidence 99999888776554 334789999999999999999999988765544332 223334433 3333333 46889
Q ss_pred EEcccc
Q 020798 314 KIWTQE 319 (321)
Q Consensus 314 ~iw~~~ 319 (321)
++|+..
T Consensus 399 ~~W~~~ 404 (408)
T 4a11_B 399 SAWSHP 404 (408)
T ss_dssp ------
T ss_pred eecCCc
Confidence 999864
No 115
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-34 Score=243.81 Aligned_cols=252 Identities=12% Similarity=0.171 Sum_probs=191.1
Q ss_pred eccCCcccEEEEEECCCCCEEEE-----------ecCCceEEEeeccccCCCCCC-CCCcccccccccccEEEEEECCCC
Q 020798 18 TLNGHLRAISSVKFSHDGRLLAS-----------SSADKTLLTYSLSSISNSDST-PPSPLQKFTGHEQGVSDLVFSSDS 85 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~-----------~~~d~~v~~~~~~~~~~~~~~-~~~~~~~~~~h~~~i~~~~~~~~~ 85 (321)
.|.+|...|.+++++ ++.+++ ++.|+.+++|++......... ..........+...+.+++|+|||
T Consensus 68 ~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 467888889888765 445554 456788999987543210000 000111223455678999999999
Q ss_pred CEEEEE--eCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE--EEeCCCCCee
Q 020798 86 RFLVSA--SDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK--VLPAHSDPVT 161 (321)
Q Consensus 86 ~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~~~~~~v~ 161 (321)
++++++ +.|+.|++||+.+++++..+. |...|.+++|+|+++++++++.+ .+.+|+..+++... ....|...+.
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLS 223 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEE
Confidence 998754 478999999999998877765 77789999999999999998855 46666666665443 3346778899
Q ss_pred EEEEccCCCEEEEEeCCC----eEEEEeCCCCcee---eeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE
Q 020798 162 AVDFNRDGTMIVTSSYDG----LCRIWDASTGHCM---KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI 234 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~dg----~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~ 234 (321)
+++|+|++..+++++.++ .+++|++...... ......+...|.+++|+|+|++|++|+.|+.|+|||++++++
T Consensus 224 ~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM 303 (365)
T ss_dssp EEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE
Confidence 999999999999998877 6888988765432 122345567799999999999999999999999999999999
Q ss_pred EEEE-eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 235 LKTY-TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 235 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
+..+ .+|...+.++. +.|||++||+|+.|++|+|||+..
T Consensus 304 ~~~~~~gH~~~V~~v~---fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 304 SKIFKQAHSFAITEVT---ISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEETTSSSSCEEEEE---ECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEecCcccCCEEEEE---ECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9886 67887765543 358999999999999999999954
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2e-33 Score=227.65 Aligned_cols=251 Identities=14% Similarity=0.145 Sum_probs=184.7
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC----CCEE
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD----SRFL 88 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~----~~~l 88 (321)
+.+.+++++|..+|..+.|.||-.-|+... +. .-+...|+.++++|+ ++.+
T Consensus 76 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~----------------~~~~~~v~sla~spd~~~~~~~l 130 (356)
T 2w18_A 76 WEKLYTWHFAEVPVLQIVPVPDVYNLVCVA---------LG----------------NLEIREIRALFCSSDDESEKQVL 130 (356)
T ss_dssp EEEEEEEECCSSCEEEECCCTTCCSCEEEE---------EC----------------SSSEEEEEEECC------CCEEE
T ss_pred ceeeEEEeccCceeEEEEEcCcccceeeee---------ec----------------cccccceEEEEECCCccccccEE
Confidence 356788899999999999999764333211 11 013467899999999 8889
Q ss_pred EEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEee--CCCcEEEEecC-CCEEEEEEeCCCCCeeEEEE
Q 020798 89 VSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA--FDETVRIWDVK-TGKCLKVLPAHSDPVTAVDF 165 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~wd~~-~~~~~~~~~~~~~~v~~~~~ 165 (321)
++++.+ +++|++.+ ++.+.+++ .|+.|++|++. +++.+..+..|...+..++|
T Consensus 131 ~s~g~~--~~v~~l~~----------------------g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~f 186 (356)
T 2w18_A 131 LKSGNI--KAVLGLTK----------------------RRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTF 186 (356)
T ss_dssp EEEEEE--EEEEEETT----------------------TEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEE
T ss_pred EeCCCe--EEEEecCC----------------------CcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEe
Confidence 887743 66775433 33333322 57788888873 36666677789999999999
Q ss_pred cc---CCCEEEEEeCCCeEEEEeCCCCceeeeeccCC--CCCeEEEEEccCCCEE------------EEEecCCeEEEEe
Q 020798 166 NR---DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE--NPPVSFVKFSPNGKFI------------LVGTLDNTLRLWN 228 (321)
Q Consensus 166 ~~---~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~l------------~~~~~d~~i~i~d 228 (321)
+| ++..|++++.|++|++||++++++++.+...+ ...+..++|+|+|+++ ++|+.|++|++||
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred eccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 99 77999999999999999999999888875432 2356778999999887 4577889999999
Q ss_pred CCCCcEEEEEe-----ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeE-EEEecCCCceE
Q 020798 229 YSTGKILKTYT-----GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI-SVASHPTENII 302 (321)
Q Consensus 229 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l 302 (321)
..+++.+..+. +|... .+... .++.++++|+.|++|+|||+.+++.+..+.+|...+. .++|+|+|++|
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~--~lsg~---~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGR--FLEGD---VKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCC--EEEEE---EETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred CCCCEEEEEEEeeccCCCcce--eEccc---cCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 99998877652 44332 22221 2367899999999999999999999999999987765 58999999999
Q ss_pred EEEeecCCccEEEcccc
Q 020798 303 ASGALDNDRTVKIWTQE 319 (321)
Q Consensus 303 ~s~~~d~~~~i~iw~~~ 319 (321)
++|+. |++|||||..
T Consensus 342 aSGS~--D~TIklWd~~ 356 (356)
T 2w18_A 342 LAGQK--DGNIFVYHYS 356 (356)
T ss_dssp EEECT--TSCEEEEEEC
T ss_pred EEEEC--CCcEEEecCC
Confidence 99994 5899999863
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=7.4e-32 Score=229.62 Aligned_cols=265 Identities=12% Similarity=0.137 Sum_probs=211.7
Q ss_pred CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEE-EEEeCCCcEEEEecCCcceeeeeecC
Q 020798 36 RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFL-VSASDDKTIRLWDVPTATCLKTLIGH 114 (321)
Q Consensus 36 ~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~ 114 (321)
.++++++.|+.|++|++... ..+..+..| ..+.+++|+|+++++ ++++.|+.|++||+.+++....+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~--------~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN--------KVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT--------EEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred EEEEEcCCCCEEEEEECCCC--------eEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC
Confidence 46788999999999987532 234445555 458999999999977 56778999999999999887777655
Q ss_pred cccEEEEEECCCCCEEE-EeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE-EEEeCCCeEEEEeCCCCcee
Q 020798 115 TNYVFCVNFNPQSNMIV-SGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI-VTSSYDGLCRIWDASTGHCM 192 (321)
Q Consensus 115 ~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~ 192 (321)
. .+.+++|+|++++++ +++.++.|++||+.+++....+..+ ..+.+++|+|+++.+ ++++.++.|++||+++++..
T Consensus 74 ~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 74 S-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred C-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 5 899999999999875 4556799999999999988877654 468999999999977 67788999999999988776
Q ss_pred eeeccCCCCCeEEEEEccCCCEE-EEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeC---CCCe
Q 020798 193 KTLIDDENPPVSFVKFSPNGKFI-LVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS---EDSC 268 (321)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~g~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~dg~ 268 (321)
..+.. ...+..++|+|+++++ +++..++.|++||+++++.+..+..+. .. ......++++++++++ .++.
T Consensus 152 ~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~---~~~~~~~~g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 152 NTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-AP---SGIAVNPEGTKAYVTNVDKYFNT 225 (391)
T ss_dssp EEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-EE---EEEEECTTSSEEEEEEECSSCCE
T ss_pred EEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-Cc---cceEECCCCCEEEEEecCcCCCc
Confidence 66543 3456889999999988 456678999999999998887775432 22 2233457888888777 6899
Q ss_pred EEEEEcccceEEEEecCCCCCeEEEEecCCCceE-EEEeecCCccEEEccccc
Q 020798 269 VYLWELQSRKVVQKLEGHTDPVISVASHPTENII-ASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 269 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~~~d~~~~i~iw~~~~ 320 (321)
|++||+.+++.+..+..|. .+.+++|+|++++| ++++ .|+.|++||.+.
T Consensus 226 v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~--~d~~v~v~d~~~ 275 (391)
T 1l0q_A 226 VSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALS--FXNTVSVIDTAT 275 (391)
T ss_dssp EEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEET--TTTEEEEEETTT
T ss_pred EEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcC--CCCEEEEEECCC
Confidence 9999999999888888765 47899999999887 4544 468999999863
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-34 Score=238.44 Aligned_cols=231 Identities=10% Similarity=0.070 Sum_probs=183.3
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC---------CCEEE
Q 020798 80 VFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK---------TGKCL 150 (321)
Q Consensus 80 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~---------~~~~~ 150 (321)
.+.+++++|++|+.||.|++||+.+++.+..+. ...+.++.++|+ +++++.|+.|++|+.. +++.+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 344678899999999999999999988776665 456777788887 9999999999999765 44434
Q ss_pred EEEe-CCCCCeeEEEEcc--CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 151 KVLP-AHSDPVTAVDFNR--DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 151 ~~~~-~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
..+. .|..+|.+++|+| +++++++++.||+|++||+++++........+...+.+++|+|+|.+|++|+.|+.|++|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 4333 5678899999999 999999999999999999999887655544555568999999999999999999999999
Q ss_pred eCCCCcEE-EEEec-cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC---CCCCeE--EEEecCCCc
Q 020798 228 NYSTGKIL-KTYTG-HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG---HTDPVI--SVASHPTEN 300 (321)
Q Consensus 228 d~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---h~~~v~--~~~~~p~~~ 300 (321)
|+++++.+ ..+.. |...+.++ .+.+++.+|++++ ++.|++||+++.+.+..+.. |..++. +++|+|+++
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l---~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEV---KFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEE---EECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred ECCCCCCCccEEeccCCCCEEEE---EEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 99999877 77777 77665444 3357899999999 55999999998876554443 444444 699999999
Q ss_pred eEEEEeecCCccEEEccccc
Q 020798 301 IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~~ 320 (321)
+|++++. +|+.|++|+.++
T Consensus 274 ~l~~~s~-~d~~i~v~~~~~ 292 (343)
T 3lrv_A 274 NMIAYSN-ESNSLTIYKFDK 292 (343)
T ss_dssp EEEEEET-TTTEEEEEEECT
T ss_pred EEEEecC-CCCcEEEEEEcc
Confidence 9999874 257899998754
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.9e-32 Score=224.04 Aligned_cols=244 Identities=25% Similarity=0.426 Sum_probs=202.7
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIR 98 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~ 98 (321)
+.+|...|++++|+|+|++|++|+.|+.|++|++.. ...+..+.+|...+.++.+ +++.+++++.++.++
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~--------~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--------QKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIH 132 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT--------TEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC--------ceeEEEecCccceEEEeec--CCCEEEEEecCCceE
Confidence 457888999999999999999999999999998754 2356677889888877655 567899999999999
Q ss_pred EEecCCc-ceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEE----EEEEeCCCCCeeEEEEccCCCEE-
Q 020798 99 LWDVPTA-TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC----LKVLPAHSDPVTAVDFNRDGTMI- 172 (321)
Q Consensus 99 iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l- 172 (321)
+|+.... .....+.+|...+..+.+.++++++++++.|+.|++||+++++. ......+...+..++++|++..+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 212 (318)
T 4ggc_A 133 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 212 (318)
T ss_dssp EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEE
T ss_pred eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEE
Confidence 9998765 44566788999999999999999999999999999999987642 33455678889999999976533
Q ss_pred --EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe--cCCeEEEEeCCCCcEEEEEeccCCceeEE
Q 020798 173 --VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT--LDNTLRLWNYSTGKILKTYTGHTNSKYCI 248 (321)
Q Consensus 173 --~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 248 (321)
++++.++.|++||.+......... ....+..+.++|+++.+++++ .|+.|++||+++++++..+.+|...+.++
T Consensus 213 ~~~~~~~~~~i~lwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l 290 (318)
T 4ggc_A 213 ATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL 290 (318)
T ss_dssp EEEECTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEEecCCCCEEEEEeccccccccccc--ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 355678999999998876655442 345688899999999888765 78999999999999999999998876554
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEcccc
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSR 277 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (321)
. ..+++++|++|+.||+|+|||+...
T Consensus 291 ~---~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 291 T---MSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp E---ECTTSSCEEEEETTTEEEEECCSCC
T ss_pred E---EcCCCCEEEEEecCCeEEEEECCCC
Confidence 3 3578999999999999999998654
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.5e-32 Score=230.82 Aligned_cols=238 Identities=14% Similarity=0.189 Sum_probs=183.7
Q ss_pred cccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEe
Q 020798 65 PLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWD 143 (321)
Q Consensus 65 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd 143 (321)
++..+..|...|.+++|+|+|++|++|+.++ +++|++.+.+....... ..+..+++.++++.+ ++++.|+.|++||
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 4556678999999999999999999888775 78999988765544322 246778888888877 5678889999999
Q ss_pred cCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCC-ceeeeeccCCCCCeEEEEEccCCCEEEE--Eec
Q 020798 144 VKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTG-HCMKTLIDDENPPVSFVKFSPNGKFILV--GTL 220 (321)
Q Consensus 144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~--~~~ 220 (321)
.++++++..+. +..+|.+++++++. ++++ .++.+++||+.++ +.+..+.. +...+++++ .++++ ++.
T Consensus 88 ~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~sg~~ 157 (355)
T 3vu4_A 88 DVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYSNEFN 157 (355)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEEESSC
T ss_pred CCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEeCCCc
Confidence 99999888876 56789999998764 3333 4789999999887 54444322 344566777 56666 578
Q ss_pred CCeEEEEeCCCCc---------------E-EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCe-EEEEEcccceEEEEe
Q 020798 221 DNTLRLWNYSTGK---------------I-LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSC-VYLWELQSRKVVQKL 283 (321)
Q Consensus 221 d~~i~i~d~~~~~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~ 283 (321)
||.|++||+.+++ + +..+.+|...+.++. ..+++.+|++|+.||+ |++||+++++.+..+
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~---~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVR---LNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEE---ECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEE---ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 9999999998765 1 677888887765543 3579999999999998 999999999999999
Q ss_pred c-C-CCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 284 E-G-HTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 284 ~-~-h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
. + |..+|.+++|+|++++|++|+. |+.|+|||++.
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~--d~~v~iw~~~~ 271 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSD--KWTLHVFEIFN 271 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEET--TCEEEEEESSC
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEEC--CCEEEEEEccC
Confidence 8 5 9999999999999999999984 58999999864
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.4e-30 Score=221.71 Aligned_cols=259 Identities=15% Similarity=0.170 Sum_probs=205.8
Q ss_pred ceeeeeccCCcccEEEEEECCCCCEE-EEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE-
Q 020798 13 YTLTQTLNGHLRAISSVKFSHDGRLL-ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS- 90 (321)
Q Consensus 13 ~~~~~~~~~h~~~v~~~~~s~~g~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~- 90 (321)
.++.+.+.+|. .+.+++|+|+|++| ++++.|+.|++|++... ..+..+..+. .+.+++|+|++++|++
T Consensus 22 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--------~~~~~~~~~~-~v~~~~~spdg~~l~~~ 91 (391)
T 1l0q_A 22 NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGS-SPQGVAVSPDGKQVYVT 91 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSS-SEEEEEECTTSSEEEEE
T ss_pred CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC--------eEEEEEECCC-CccceEECCCCCEEEEE
Confidence 34556666664 58999999999976 67779999999987532 2334444443 8999999999998764
Q ss_pred EeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCC
Q 020798 91 ASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDG 169 (321)
Q Consensus 91 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (321)
++.++.|++||+.+++....+..+ ..+.+++|+|+++.+ ++++.++.|++||+++++....+..+ ..+..++|+|++
T Consensus 92 ~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg 169 (391)
T 1l0q_A 92 NMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDG 169 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTS
T ss_pred ECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCC
Confidence 456799999999999877766644 467899999999977 67888999999999999988887765 456899999999
Q ss_pred CEE-EEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe---cCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 170 TMI-VTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT---LDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 170 ~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
+.+ ++++.++.|++||+++++....+. ....+..++|+|+|+++++++ .++.|++||+.+++.+..+..+.. .
T Consensus 170 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~ 246 (391)
T 1l0q_A 170 TKVYVANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-P 246 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-E
T ss_pred CEEEEEeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-c
Confidence 877 567788999999999887665553 234678899999999999887 689999999999998888876543 2
Q ss_pred eEEEeEEEecCCeEE-EEeCCCCeEEEEEcccceEEEEecCCCCC
Q 020798 246 YCISSTFSVTNGKYI-VSGSEDSCVYLWELQSRKVVQKLEGHTDP 289 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~h~~~ 289 (321)
......++++++ ++++.|+.|++||+.+++.+..+..|..+
T Consensus 247 ---~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 247 ---AGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNP 288 (391)
T ss_dssp ---EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred ---cEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCC
Confidence 222334677766 67789999999999999988888776554
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=238.21 Aligned_cols=239 Identities=14% Similarity=0.185 Sum_probs=196.4
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc---eeeeee--------------------------------------
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT---CLKTLI-------------------------------------- 112 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~-------------------------------------- 112 (321)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 467899999999966655 57899999998887 444333
Q ss_pred ----------------cCcccEEEEEECCCCCEE-EEeeCCCcEEEEecC--CCEEEEEEe--CCCCCeeEEEEccCCCE
Q 020798 113 ----------------GHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVK--TGKCLKVLP--AHSDPVTAVDFNRDGTM 171 (321)
Q Consensus 113 ----------------~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~ 171 (321)
+|...|.+++|+|++++| ++++.||.|++||+. +++....+. .|...|.+++|+|++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 233369999999999996 889999999999998 777777665 56788999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceee---eeccCCCCCeEEEEEccC---CCEEEEEecCCeEEEEeCCCCcEEEE-EeccCCc
Q 020798 172 IVTSSYDGLCRIWDASTGHCMK---TLIDDENPPVSFVKFSPN---GKFILVGTLDNTLRLWNYSTGKILKT-YTGHTNS 244 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~---g~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~ 244 (321)
|++++.+|.+++|++.++.... .....+...+.+++|+|+ +++|++++.|+.|++||+++++.+.. +.+|...
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 9999999999999998765432 122345678999999999 99999999999999999999988877 4467666
Q ss_pred eeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC-------------------------CCCCeEEEEecCCC
Q 020798 245 KYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG-------------------------HTDPVISVASHPTE 299 (321)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------------------------h~~~v~~~~~~p~~ 299 (321)
+.++. + . ++.+|++|+.|+.|++||+.+++.+..+.. ....|.+++|+|++
T Consensus 244 v~~~~--~-s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 244 VSSIC--C-G-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp EEEEE--E-C-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred eEEEE--E-C-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 55543 3 3 899999999999999999999988777653 23578999999999
Q ss_pred ceEEEEeecCCccEEEccc
Q 020798 300 NIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 300 ~~l~s~~~d~~~~i~iw~~ 318 (321)
++|++++. .++.|++|++
T Consensus 320 ~~l~~~~~-~d~~i~iw~~ 337 (450)
T 2vdu_B 320 PFVAFFVE-ATKCIIILEM 337 (450)
T ss_dssp SEEEEEET-TCSEEEEEEE
T ss_pred CEEEEEEC-CCCeEEEEEe
Confidence 99999873 3689999998
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=6.8e-31 Score=226.64 Aligned_cols=287 Identities=13% Similarity=0.127 Sum_probs=218.2
Q ss_pred CcccEEEEE---ECCCCCEEEEecC--------------CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC
Q 020798 22 HLRAISSVK---FSHDGRLLASSSA--------------DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD 84 (321)
Q Consensus 22 h~~~v~~~~---~s~~g~~l~~~~~--------------d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~ 84 (321)
....+..++ |+|+++.++..+. ++.+.+|.+... ......+..+..+ ..+.+++|+|+
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~----~~~~~~~~~~~~~-~~~~~~~~s~~ 133 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKE----GITHRFISRFKTG-FQPKSVRFIDN 133 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBT----TCSEEEEEEEECS-SCBCCCEESSS
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCC----CCcceEEEEEcCC-CCceEEEEeCC
Confidence 345778888 9998877654322 222233332210 0111223333333 44668999997
Q ss_pred CCEEEEEeCCCcEEEEecCCcceee-----eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCC
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLK-----TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 159 (321)
++++++++.++.|++||+.+++... .+.+|...+.+++|+|++..+++++.|+.|++||+++++....+..|...
T Consensus 134 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~ 213 (433)
T 3bws_A 134 TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW 213 (433)
T ss_dssp SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS
T ss_pred CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC
Confidence 7788888889999999999888765 34578889999999999999999999999999999999888888888999
Q ss_pred eeEEEEccCCCEEEEE-eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe--------cCCeEEEEeCC
Q 020798 160 VTAVDFNRDGTMIVTS-SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT--------LDNTLRLWNYS 230 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~--------~d~~i~i~d~~ 230 (321)
+.+++|+|+++.++++ +.++.|++||+++++....+.. ...+..++|+|+|+++++++ .|+.|++||+.
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 9999999999987554 4799999999998877655432 34588999999999999887 48899999999
Q ss_pred CCcEEEEEeccCCceeEEEeEEEecCCe-EEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecC
Q 020798 231 TGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
+++.+..+.. ...... ....++++ .+++++.++.|++||+.+++.+..+. +...+.+++|+|++++|++++.+.
T Consensus 292 ~~~~~~~~~~-~~~~~~---~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 292 KEKLIDTIGP-PGNKRH---IVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp TTEEEEEEEE-EECEEE---EEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCC
T ss_pred CCcEEeeccC-CCCcce---EEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCC
Confidence 9887766532 222222 23346664 66777999999999999988887776 667899999999999988887543
Q ss_pred -------------CccEEEccccc
Q 020798 310 -------------DRTVKIWTQEK 320 (321)
Q Consensus 310 -------------~~~i~iw~~~~ 320 (321)
||.|++||.+.
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTT
T ss_pred CccccccccccccceEEEEEECCC
Confidence 46999999853
No 124
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.4e-31 Score=220.59 Aligned_cols=236 Identities=17% Similarity=0.303 Sum_probs=176.9
Q ss_pred cccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc----ceeeeeecCcccEEEEEECC--CCCEEEEeeCCCcEE
Q 020798 67 QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA----TCLKTLIGHTNYVFCVNFNP--QSNMIVSGAFDETVR 140 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~ 140 (321)
..+.+|...|.+++|+|++++|++++.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 456789999999999999999999999999999999876 35566788999999999999 589999999999999
Q ss_pred EEecCCC---------EEEEEEeCCCCCeeEEEEccC--CCEEEEEeCCCeEEEEeCCCCceeeeec------------c
Q 020798 141 IWDVKTG---------KCLKVLPAHSDPVTAVDFNRD--GTMIVTSSYDGLCRIWDASTGHCMKTLI------------D 197 (321)
Q Consensus 141 ~wd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~------------~ 197 (321)
+||++++ +....+..|...|.+++|+|+ +..+++++.|+.|++||+++++....+. .
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999876 567778889999999999999 9999999999999999998765433221 1
Q ss_pred CCCCCeEEEEEccC---CCEEEEEecCCeEEEEeCCCCcE--EEEEeccCCceeEEEeEEEecCC----eEEEEeCCCCe
Q 020798 198 DENPPVSFVKFSPN---GKFILVGTLDNTLRLWNYSTGKI--LKTYTGHTNSKYCISSTFSVTNG----KYIVSGSEDSC 268 (321)
Q Consensus 198 ~~~~~~~~~~~~~~---g~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~dg~ 268 (321)
.+...+.++.|+|+ +.++++++.++.+.+|+...++. +..+.+|...+.++. ..+++ .+|++|+.||.
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~---~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSIS---WAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEE---ECCCSSCSSEEEEEEETTSC
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEE---ECCCCCCcceEEEEEcCCCe
Confidence 34557889999997 99999999999998888877765 556667766654443 34666 89999999999
Q ss_pred EEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 269 VYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 269 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
|++||++.+........+...+......+....++.+
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQG 278 (351)
T ss_dssp EEEEEEEECC---------------------------
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCccccccccc
Confidence 9999998765444333333333444444444443333
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.1e-32 Score=231.38 Aligned_cols=247 Identities=16% Similarity=0.132 Sum_probs=174.5
Q ss_pred CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--------CCCEEEEEe
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--------DSRFLVSAS 92 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--------~~~~l~~~~ 92 (321)
.|...+....+++++++||+++.|++|++|+...... ....++..+.+|.+.|.+++|+| ++++|++|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~---~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETI---ITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEE---EEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcc---ceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 3444455555667788999999999999999764321 11123456789999999999987 789999999
Q ss_pred CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEEEEE-------------------
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKV------------------- 152 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~------------------- 152 (321)
.|++|+|||+.++.....+..|...+.+++|+|++. +|++++.|++|++||+++++....
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 999999999988887888888999999999999874 799999999999999987654322
Q ss_pred ------EeCCCCCeeEEEEc-cCCCEEEEEeCCCeEEEEeCCCCceeeeeccC------------------CCCCeEEEE
Q 020798 153 ------LPAHSDPVTAVDFN-RDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD------------------ENPPVSFVK 207 (321)
Q Consensus 153 ------~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------------------~~~~~~~~~ 207 (321)
...|...+.++.|. |++..+++++.|+++++||+..++....+... ....+. ..
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 322 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLG-AC 322 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSC-CE
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCccee-EE
Confidence 12466778888886 79999999999999999999765543322110 111111 23
Q ss_pred Ecc--CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc
Q 020798 208 FSP--NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ 275 (321)
Q Consensus 208 ~~~--~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (321)
++| ++.++++|+.|+.|++||+.+++.+..+..|...+.. ..+.++|++||+++.+| +.+|.+.
T Consensus 323 ~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~s---vafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVD---FCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEE---EEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEE---EEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 333 3445667778999999999999888877777766443 33458999999998766 6666653
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=2.5e-29 Score=221.90 Aligned_cols=279 Identities=12% Similarity=0.127 Sum_probs=216.7
Q ss_pred EECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec--CCcce
Q 020798 30 KFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV--PTATC 107 (321)
Q Consensus 30 ~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~--~~~~~ 107 (321)
+|+|++.++++++.|+.|.+||... ...+..+..+.. +..++|+|+|++|++++.|+.|.+||+ .++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t--------~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDS--------KKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTT--------CCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCC--------ceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE
Confidence 4899999999999999999998653 223445552222 889999999999999999999999999 78887
Q ss_pred eeeeecCcccEEEEEECC----CCCEEEEee-CCCcEEEEecCCCEEEEEEeCC-----------CCCeeEEEEccCCCE
Q 020798 108 LKTLIGHTNYVFCVNFNP----QSNMIVSGA-FDETVRIWDVKTGKCLKVLPAH-----------SDPVTAVDFNRDGTM 171 (321)
Q Consensus 108 ~~~~~~~~~~v~~~~~~~----~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~ 171 (321)
+..+. +...+..++|+| +++++++++ .+++|.+||..+++++..+..+ ...+..+.++|++..
T Consensus 215 ~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 215 VAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp EEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred EEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 77776 455678999999 999998887 4899999999999888877642 236889999998765
Q ss_pred -EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcEEEEEeccCCce--eE
Q 020798 172 -IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKILKTYTGHTNSK--YC 247 (321)
Q Consensus 172 -l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~--~~ 247 (321)
+++...++.|.+||..+.+............+..+.|+|+|+++++++ .+++|.+||+.+++++..+.....+. ..
T Consensus 294 ~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g 373 (543)
T 1nir_A 294 FIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRG 373 (543)
T ss_dssp EEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTC
T ss_pred EEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCC
Confidence 456667899999999876543311112344566789999999877665 58899999999999988886422111 11
Q ss_pred EEeEEEecC-CeEEEEeC-CCCeEEEEEccc-------ceEEEEecCCCCCeEEEEecCCCceEEEEee---c--CCccE
Q 020798 248 ISSTFSVTN-GKYIVSGS-EDSCVYLWELQS-------RKVVQKLEGHTDPVISVASHPTENIIASGAL---D--NDRTV 313 (321)
Q Consensus 248 ~~~~~~~~~-~~~l~~~~-~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~---d--~~~~i 313 (321)
.. +..++ +..++++. .|++|.+||+.+ .++++.+.+|...+..+++||++++|.+++. | .+++|
T Consensus 374 ~~--~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v 451 (543)
T 1nir_A 374 AN--FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSV 451 (543)
T ss_dssp EE--EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCE
T ss_pred cc--cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceE
Confidence 21 22344 77777775 689999999988 8899999999988999999999999999761 1 14689
Q ss_pred EEccccc
Q 020798 314 KIWTQEK 320 (321)
Q Consensus 314 ~iw~~~~ 320 (321)
.+||.+.
T Consensus 452 ~v~d~~~ 458 (543)
T 1nir_A 452 AVFDLKN 458 (543)
T ss_dssp EEEETTC
T ss_pred EEEECCC
Confidence 9999863
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=9.2e-30 Score=206.27 Aligned_cols=218 Identities=13% Similarity=0.194 Sum_probs=164.7
Q ss_pred CCcccEEEEEECCC----CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe--CC
Q 020798 21 GHLRAISSVKFSHD----GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS--DD 94 (321)
Q Consensus 21 ~h~~~v~~~~~s~~----g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~--~d 94 (321)
-|.+.|.+++|+|| ++++++++.+ +.+|++ ++++++.+++ .|
T Consensus 109 ~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l------------------------------~~g~lv~ss~~g~d 156 (356)
T 2w18_A 109 LEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGL------------------------------TKRRLVSSSGTLSD 156 (356)
T ss_dssp SSEEEEEEECC------CCEEEEEEEEE--EEEEEE------------------------------TTTEEEEEESSSTT
T ss_pred ccccceEEEEECCCccccccEEEeCCCe--EEEEec------------------------------CCCcEEEecccCCC
Confidence 36779999999999 9999997733 555532 3555555533 58
Q ss_pred CcEEEEec-CCcceeeeeecCcccEEEEEECC---CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCC---CCeeEEEEcc
Q 020798 95 KTIRLWDV-PTATCLKTLIGHTNYVFCVNFNP---QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS---DPVTAVDFNR 167 (321)
Q Consensus 95 ~~i~iwd~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~---~~v~~~~~~~ 167 (321)
+.|++|++ ++++.+..+.+|...+..++|+| ++..|++++.|++|++||+++++++..+..|. ..+.+++|+|
T Consensus 157 ~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp 236 (356)
T 2w18_A 157 QQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE 236 (356)
T ss_dssp CEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE
T ss_pred CcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC
Confidence 88999998 44777777888999999999999 77999999999999999999999999987654 3567779999
Q ss_pred CCCEE------------EEEeCCCeEEEEeCCCCceeeeec----cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCC
Q 020798 168 DGTMI------------VTSSYDGLCRIWDASTGHCMKTLI----DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 168 ~~~~l------------~~~~~dg~i~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~ 231 (321)
++..+ ++|+.|+++++||..+++.+..+. ..+... .+..+.++.++++++.|++|+|||+.+
T Consensus 237 dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~--~lsg~~sg~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 237 MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR--FLEGDVKDHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC--EEEEEEETTEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce--eEccccCCCEEEEEcCCCcEEEEECCC
Confidence 99876 567789999999999988765432 222222 233344578899999999999999999
Q ss_pred CcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 232 GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
++.+..+.+|...... ...+.|||++|++|+.|++|+|||+
T Consensus 315 Gk~l~tL~gH~~~vvs--~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 315 GQCTALLPPVSDQHWS--FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSEEEEECCC--CCCC--EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CcEEEEecCCCCCeEE--EEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999888665432 2234579999999999999999996
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=7.7e-28 Score=212.36 Aligned_cols=292 Identities=11% Similarity=0.102 Sum_probs=219.2
Q ss_pred eeeecc-CCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC----CCCEEE
Q 020798 15 LTQTLN-GHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS----DSRFLV 89 (321)
Q Consensus 15 ~~~~~~-~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~----~~~~l~ 89 (321)
+...+. +|. +..++|+|||++|++++.|+.|.+||+.. .....+..+. +...+..++|+| +|++++
T Consensus 171 ~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~------~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 171 IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWA------KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTS------SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEE
T ss_pred EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcC------CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEE
Confidence 445555 443 88999999999999999999999999831 1122344444 345689999999 999999
Q ss_pred EEe-CCCcEEEEecCCcceeeeeecC----------c-ccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEEE--EEe
Q 020798 90 SAS-DDKTIRLWDVPTATCLKTLIGH----------T-NYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCLK--VLP 154 (321)
Q Consensus 90 ~~~-~d~~i~iwd~~~~~~~~~~~~~----------~-~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~--~~~ 154 (321)
+++ .+++|.+||..+.+++..+..+ . ..+..+.++|++.. +++...++.|.+||..+.+... .+.
T Consensus 242 v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 242 AGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp EEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE
T ss_pred EEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec
Confidence 887 4899999999999887776542 2 26889999998765 5666788999999998765333 343
Q ss_pred CCCCCeeEEEEccCCCEEEEEe-CCCeEEEEeCCCCceeeeeccC---CCCCeEEEEEccC-CCEEEEEe-cCCeEEEEe
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSS-YDGLCRIWDASTGHCMKTLIDD---ENPPVSFVKFSPN-GKFILVGT-LDNTLRLWN 228 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~-g~~l~~~~-~d~~i~i~d 228 (321)
+...+..++|+|+++++++++ .+++|.+||+.++++...+... +......+ ++|+ |..++++. .|++|.+||
T Consensus 322 -~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d 399 (543)
T 1nir_A 322 -AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIG 399 (543)
T ss_dssp -CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEE
T ss_pred -cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEE
Confidence 456678899999999776654 6889999999999877665432 22122222 4676 55566654 579999999
Q ss_pred CCC-------CcEEEEEeccCCceeEEEeEEEecCCeEEEEeC-------CCCeEEEEEcccceEE-EEe--------cC
Q 020798 229 YST-------GKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS-------EDSCVYLWELQSRKVV-QKL--------EG 285 (321)
Q Consensus 229 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~dg~i~vwd~~~~~~~-~~~--------~~ 285 (321)
+.+ .+.++.+..+......+. ..+++++|++++ .+++|.|||+.+.+.. ..+ ..
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~---~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~ 476 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGGSLFIK---THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGE 476 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEE---CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCS
T ss_pred eCCCCCchhcCeEEEEEEcCCCCceEEE---cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCC
Confidence 988 889999988765544433 358999999987 2679999999988765 433 35
Q ss_pred CCCCeEEEEecCCCceEEEEee---cCCccEEEccccc
Q 020798 286 HTDPVISVASHPTENIIASGAL---DNDRTVKIWTQEK 320 (321)
Q Consensus 286 h~~~v~~~~~~p~~~~l~s~~~---d~~~~i~iw~~~~ 320 (321)
+...+..++|+|+|+.+..+.. +.++.|.|||.+.
T Consensus 477 ~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 477 GAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp SCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 6778999999999999887643 3468999999763
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=9e-29 Score=211.99 Aligned_cols=265 Identities=11% Similarity=0.095 Sum_probs=204.8
Q ss_pred eeccCCcccEEEEEECC--------------CCCEEEEecCC------ceEEEeeccccCCCCCCCCCcccccccccccE
Q 020798 17 QTLNGHLRAISSVKFSH--------------DGRLLASSSAD------KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGV 76 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~--------------~g~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 76 (321)
..+.+|...+..+++++ .+..++.++.+ +.|++||+.. .....+.+|...+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g---------~~~~~l~~~~~~v 181 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG---------YNQFVVHRSPQPL 181 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS---------CSCEEEEEESSCE
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC---------CCCEEEeCCCCcc
Confidence 45778888887777765 15666666554 7999998753 1245677889999
Q ss_pred EEEEECCCCCEEEEEeCCC---cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCCc--EEEEecCCCEEE
Q 020798 77 SDLVFSSDSRFLVSASDDK---TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDET--VRIWDVKTGKCL 150 (321)
Q Consensus 77 ~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~~wd~~~~~~~ 150 (321)
.+++|+|+|++|++++.++ .|++||+.+++.. .+..|...+.+++|+|+|+.|+ +++.++. |++||+++++.
T Consensus 182 ~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~- 259 (415)
T 2hqs_A 182 MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI- 259 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-
T ss_pred eeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-
Confidence 9999999999999998875 8999999988764 5667888899999999999887 6666554 99999988775
Q ss_pred EEEeCCCCCeeEEEEccCCCEEEEEeC-CC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC---CeE
Q 020798 151 KVLPAHSDPVTAVDFNRDGTMIVTSSY-DG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD---NTL 224 (321)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d---~~i 224 (321)
..+..|...+.+++|+|+++.|++++. ++ .|.+||+.+++... + ..+...+..++|+|+|++|+.++.+ ..|
T Consensus 260 ~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l-~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i 337 (415)
T 2hqs_A 260 RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-I-TWEGSQNQDADVSSDGKFMVMVSSNGGQQHI 337 (415)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-C-CCSSSEEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-E-ecCCCcccCeEECCCCCEEEEEECcCCceEE
Confidence 456677888999999999998888776 44 67888988776332 2 2234567789999999999988764 589
Q ss_pred EEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC---eEEEEEcccceEEEEecCCCCCeEEEEecCCCc
Q 020798 225 RLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS---CVYLWELQSRKVVQKLEGHTDPVISVASHPTEN 300 (321)
Q Consensus 225 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 300 (321)
.+||+.+++.. .+..+. .. ....+.++|++|+.++.++ .|++||+. ++....+.+|.+.|.+++|+|...
T Consensus 338 ~~~d~~~~~~~-~l~~~~-~~---~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 338 AKQDLATGGVQ-VLSSTF-LD---ETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEETTTCCEE-ECCCSS-SC---EEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred EEEECCCCCEE-EecCCC-Cc---CCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 99999988764 344332 22 2233457899888888776 79999987 455677889999999999999864
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=1.8e-28 Score=225.37 Aligned_cols=285 Identities=13% Similarity=0.125 Sum_probs=210.8
Q ss_pred cccEEEEEECCCCCEEEEecC-Cc-----eEEEeeccccCCCCCCCCCcccccccc--c---------------------
Q 020798 23 LRAISSVKFSHDGRLLASSSA-DK-----TLLTYSLSSISNSDSTPPSPLQKFTGH--E--------------------- 73 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~-d~-----~v~~~~~~~~~~~~~~~~~~~~~~~~h--~--------------------- 73 (321)
...+.+++|||||++|++++. |+ .|.+|++.+.. ....+..+ .
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ--------TRLLVDSKVVLPGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC--------EEEEECGGGTC--------------------C
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc--------eeEccchhhcccccccccchhhhhhhhhhhcc
Confidence 457999999999999999988 88 89999876422 11111111 1
Q ss_pred -ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc--eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEE
Q 020798 74 -QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT--CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL 150 (321)
Q Consensus 74 -~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 150 (321)
..+.+++|+|||++|++++. +.|.+||+.++. ....+..|...+..++|+|||++|+.++ ++.|++||+.+++..
T Consensus 108 ~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 108 MTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp CEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred ccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence 34788999999999998886 899999998872 3455667778899999999999999887 468999999988766
Q ss_pred EEEeCCCCC----------------eeEEEEccCCCEEEEEeCCC---------------------------------eE
Q 020798 151 KVLPAHSDP----------------VTAVDFNRDGTMIVTSSYDG---------------------------------LC 181 (321)
Q Consensus 151 ~~~~~~~~~----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i 181 (321)
.....+... +..++|+|||+.|++++.|+ .|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 544433332 47899999999998887665 78
Q ss_pred EEEeCCC-Cceeeeecc-CCCCCeEEEEEccCCCEEEEEec-----CCeEEEEeCCCCcEEEEEeccCCcee-EEEeEEE
Q 020798 182 RIWDAST-GHCMKTLID-DENPPVSFVKFSPNGKFILVGTL-----DNTLRLWNYSTGKILKTYTGHTNSKY-CISSTFS 253 (321)
Q Consensus 182 ~~~d~~~-~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~-~~~~~~~ 253 (321)
.+||+.+ ++....... .+...+..++| |+|++|+++.. +..|.+||+.+++....+..+...-. .+....+
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 8999988 765433222 24456788999 99999987654 46799999999887766654432100 0111233
Q ss_pred ecCCeEEEEeCCCCeEEEEEcc-cceEEEEecCCCCCeEEE-EecCCCceEEEEeec-CCccEEEcccc
Q 020798 254 VTNGKYIVSGSEDSCVYLWELQ-SRKVVQKLEGHTDPVISV-ASHPTENIIASGALD-NDRTVKIWTQE 319 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~-~~~p~~~~l~s~~~d-~~~~i~iw~~~ 319 (321)
.+||+++++++.||.++||.+. .++ ...+..|...|.++ .|+|+++.|+..+.+ +...++||+.+
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 4788899999999988888775 345 77788888889887 599999877655433 22389999864
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.5e-28 Score=209.21 Aligned_cols=280 Identities=12% Similarity=0.110 Sum_probs=206.1
Q ss_pred CcccEEEEEECCCCC-EEEEec----CCc----eEEEeec--cccCCCCCCCCCcc--cccccccccEEEEEECC-----
Q 020798 22 HLRAISSVKFSHDGR-LLASSS----ADK----TLLTYSL--SSISNSDSTPPSPL--QKFTGHEQGVSDLVFSS----- 83 (321)
Q Consensus 22 h~~~v~~~~~s~~g~-~l~~~~----~d~----~v~~~~~--~~~~~~~~~~~~~~--~~~~~h~~~i~~~~~~~----- 83 (321)
+...+...+|++.|. ++++|+ .+| .+++||+ ... ..+ ..+.+|...+..+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~d~~~ 132 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPG--------TVLAQNSYKVNKQWLRYAGHTASDEVF 132 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTT--------CEEEEEEEEECGGGHHHHHHHHHHHHH
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCC--------CEEeeeEEEcChhHHHHHHHHHHHHHH
Confidence 345677788888875 565775 467 8999997 432 122 34667777776666553
Q ss_pred ---------CCCEEEEEeCC------CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCC---cEEEEecC
Q 020798 84 ---------DSRFLVSASDD------KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE---TVRIWDVK 145 (321)
Q Consensus 84 ---------~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~wd~~ 145 (321)
.+..++.++.+ +.|++||+... ....+.+|...+.+++|+|+|+.|++++.++ .|++||++
T Consensus 133 ~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~ 211 (415)
T 2hqs_A 133 EKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA 211 (415)
T ss_dssp HHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred HHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC
Confidence 25556655543 79999999754 4567778899999999999999999998875 99999999
Q ss_pred CCEEEEEEeCCCCCeeEEEEccCCCEEE-EEeCCC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-C
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRDGTMIV-TSSYDG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-D 221 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d 221 (321)
+++.. .+..|...+.+++|+|+|+.|+ +++.++ .|++||+++++.. .+ ..+...+..++|+|+|++|+.++. +
T Consensus 212 tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l-~~~~~~~~~~~~spdg~~l~~~s~~~ 288 (415)
T 2hqs_A 212 NGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QV-TDGRSNNTEPTWFPDSQNLAFTSDQA 288 (415)
T ss_dssp TCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EC-CCCSSCEEEEEECTTSSEEEEEECTT
T ss_pred CCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eC-cCCCCcccceEECCCCCEEEEEECCC
Confidence 88765 4566788899999999999877 565555 4999999887653 32 344567889999999999988776 4
Q ss_pred C--eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC---CeEEEEEcccceEEEEecCCCCCeEEEEec
Q 020798 222 N--TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED---SCVYLWELQSRKVVQKLEGHTDPVISVASH 296 (321)
Q Consensus 222 ~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 296 (321)
+ .|.+||+.+++.. .+..+... +......++|++|+.++.+ ..|++||+.+++. ..+..|. .+.+++|+
T Consensus 289 g~~~i~~~d~~~~~~~-~l~~~~~~---~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~s 362 (415)
T 2hqs_A 289 GRPQVYKVNINGGAPQ-RITWEGSQ---NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLA 362 (415)
T ss_dssp SSCEEEEEETTSSCCE-ECCCSSSE---EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEEC
T ss_pred CCcEEEEEECCCCCEE-EEecCCCc---ccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEc
Confidence 4 6888898887643 33333322 2223445789988887754 5899999998776 3455554 89999999
Q ss_pred CCCceEEEEeecCC-ccEEEcccc
Q 020798 297 PTENIIASGALDND-RTVKIWTQE 319 (321)
Q Consensus 297 p~~~~l~s~~~d~~-~~i~iw~~~ 319 (321)
|++++|++++.|+. ..|++|+.+
T Consensus 363 pdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 363 PNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCCCEEEEEEcCCCccEEEEEECC
Confidence 99999999886632 268898875
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=1.1e-26 Score=193.96 Aligned_cols=272 Identities=11% Similarity=0.193 Sum_probs=187.5
Q ss_pred EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC-CcEEEEecC--Ccc--eeeee
Q 020798 37 LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD-KTIRLWDVP--TAT--CLKTL 111 (321)
Q Consensus 37 ~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d-~~i~iwd~~--~~~--~~~~~ 111 (321)
++++++.++.|.+|++... .....+. ...|...+..++|+|++++|++++.+ +.|.+|++. +++ .+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHE-----GALTLTQ-VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEEGGGTEEEEEEECTT-----SCEEEEE-EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred EEEeCCCCCeEEEEEECCC-----CcEEEee-eEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc
Confidence 3445578999999988520 0111122 23466778899999999998888876 899999997 444 23334
Q ss_pred ecCcccEEEEEECCCCCEEEEee-CCCcEEEEecC---CCEEEEEEeCCCCCeeEEEEccCCCEEEEEe-CCCeEEEEeC
Q 020798 112 IGHTNYVFCVNFNPQSNMIVSGA-FDETVRIWDVK---TGKCLKVLPAHSDPVTAVDFNRDGTMIVTSS-YDGLCRIWDA 186 (321)
Q Consensus 112 ~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~ 186 (321)
..+. .+..++|+|+++++++++ .++.|++||+. ..+....+.. ...+.+++|+|+++.+++++ .++.+++||+
T Consensus 81 ~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 81 ALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp ECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred ccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 4333 678899999999876665 48889999994 3334444443 34588999999999888777 8999999999
Q ss_pred CC-Cceee----eeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCC--CcE--EEEEecc----CCceeEEEeEE
Q 020798 187 ST-GHCMK----TLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYST--GKI--LKTYTGH----TNSKYCISSTF 252 (321)
Q Consensus 187 ~~-~~~~~----~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~--~~~--~~~~~~~----~~~~~~~~~~~ 252 (321)
.+ ++... .........+..++|+|+|+++++++ .++.|.+|++.. ++. ....... ..... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~i~ 237 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW-AADIH 237 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC-EEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCC-ccceE
Confidence 87 54322 22223344677899999999876655 789999999953 433 2223211 11111 22233
Q ss_pred EecCCeEEE-EeCCCCeEEEEEcc----cceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 253 SVTNGKYIV-SGSEDSCVYLWELQ----SRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 253 ~~~~~~~l~-~~~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
..+++++|+ ++..++.|++||+. ..+.+..+..+.. +.+++|+|++++|++++.+ ++.|.+|+.+
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~-~~~v~v~~~d 307 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQK-SHHISVYEIV 307 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTT-TCEEEEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCC-CCeEEEEEEc
Confidence 346787665 56689999999998 3345555655544 8999999999988887643 5889999654
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=2.7e-25 Score=186.31 Aligned_cols=271 Identities=11% Similarity=0.075 Sum_probs=206.4
Q ss_pred cccEEEEEECCCCCEEEEecC-------CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEE-EEeCC
Q 020798 23 LRAISSVKFSHDGRLLASSSA-------DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLV-SASDD 94 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~-------d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~-~~~~d 94 (321)
...+..++|+|+|+++++++. ++.|.+||.... ..+..+.. ...+..++|+|++++++ +...+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~--------~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~ 110 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL--------EVTQAIHN-DLKPFGATINNTTQTLWFGNTVN 110 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC--------CEEEEEEE-SSCCCSEEEETTTTEEEEEETTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC--------eEEEEEec-CCCcceEEECCCCCEEEEEecCC
Confidence 456889999999998887764 568999976532 22233322 33467899999998655 45557
Q ss_pred CcEEEEecCCcceeeeeecCcc---------cEEEEEECCCCCEEEEee--CCCcEEEEecCCCEEEEEEeCCCCCeeEE
Q 020798 95 KTIRLWDVPTATCLKTLIGHTN---------YVFCVNFNPQSNMIVSGA--FDETVRIWDVKTGKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 163 (321)
+.|.+||..+++....+..+.. .+..++++|+++.+++++ .++.|.+||..+++....++.+...+..+
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGL 190 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCC
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceE
Confidence 9999999999987776654432 268899999999877665 47889999999999888887566668899
Q ss_pred EEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC---CCCCeEEEEEccCCCEEEEEec-CCeEEEEeCCCCcEEEEEe
Q 020798 164 DFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD---ENPPVSFVKFSPNGKFILVGTL-DNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 164 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~-d~~i~i~d~~~~~~~~~~~ 239 (321)
+|+|+++.+++++.++.+.+||+.+++....+... ....+..++|+|+|++++++.. ++.|.+||+.+++.+..+.
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 99999999999999999999999988776655431 2334677999999998877765 4899999999999888776
Q ss_pred ccCCceeEEEeEEEecCCeE-EEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeec
Q 020798 240 GHTNSKYCISSTFSVTNGKY-IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD 308 (321)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d 308 (321)
.... .. ..+ .+++++ +++...++.|.+||..+++.+..+.... .+.+++|+|++++|..+..+
T Consensus 271 ~~~~--~~--~~~-s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 271 APES--LA--VLF-NPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CSSC--CC--EEE-ETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEEC
T ss_pred cCCC--ce--EEE-CCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEcc
Confidence 5432 12 223 367764 5555679999999999998888776543 67999999999976665543
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=6.5e-26 Score=188.52 Aligned_cols=276 Identities=14% Similarity=0.187 Sum_probs=195.0
Q ss_pred EEECCCCCE-EEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-CCcEEEEecCCcc
Q 020798 29 VKFSHDGRL-LASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-DKTIRLWDVPTAT 106 (321)
Q Consensus 29 ~~~s~~g~~-l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~ 106 (321)
..|.+++++ +++++.++.|.+||.... ..+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~ 73 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTL--------EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP 73 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTC--------CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCccc--------ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 346666554 778888999999987532 2233334445556 9999999997766655 8899999999888
Q ss_pred e-eeeeecCcccEEEEEECCCCCEEEEeeCCC---cEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE-EeCCCe-
Q 020798 107 C-LKTLIGHTNYVFCVNFNPQSNMIVSGAFDE---TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT-SSYDGL- 180 (321)
Q Consensus 107 ~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~- 180 (321)
. ...+..+.....+++++|++++++++..++ .|++||+.+++.+..++.+ .....++|+|+++.+++ ...++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~ 152 (331)
T 3u4y_A 74 PKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANT 152 (331)
T ss_dssp CEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTE
T ss_pred eeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCce
Confidence 6 566665655555599999999998655553 8999999999888877654 45689999999985554 456678
Q ss_pred EEEEeCCCCcee----eeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcE---EEEEeccCCceeEEEeEE
Q 020798 181 CRIWDASTGHCM----KTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKI---LKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 181 i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~ 252 (321)
+.+|++.....+ .... ........++|+|+|+++++++ .++.|.+||+.+++. +..+...... .. ..
T Consensus 153 i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~-~~---~~ 227 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLP-GT---IV 227 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCC-CC---EE
T ss_pred EEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCC-ce---EE
Confidence 999998753322 1111 2234578899999999776655 588999999998887 7776644322 22 23
Q ss_pred EecCCeEEEEe-CCCCeEEEEEcccceE--EEEecCC----CCC---eEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 253 SVTNGKYIVSG-SEDSCVYLWELQSRKV--VQKLEGH----TDP---VISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 253 ~~~~~~~l~~~-~~dg~i~vwd~~~~~~--~~~~~~h----~~~---v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..++|++++++ ..++.|.+||+.+++. +..+..+ ..+ ...++|+|++++|+.++.+ ++.|++|+++.
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~d~~~ 304 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI-SRELKVFTISG 304 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT-TTEEEEEETTS
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC-CCcEEEEEecC
Confidence 34788866544 5678899999998876 4433322 222 2458999999998777654 57899999864
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.6e-26 Score=188.62 Aligned_cols=253 Identities=14% Similarity=0.156 Sum_probs=184.7
Q ss_pred EecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC-cceeeeeecC-ccc
Q 020798 40 SSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT-ATCLKTLIGH-TNY 117 (321)
Q Consensus 40 ~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~-~~~ 117 (321)
.++.++.|.+|++... ....+..|...|.+++|+|++++|++++ ++.|.+||+.+ ++.......+ ...
T Consensus 17 ~~~~~~~i~~~d~~~~---------~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR---------KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATIC 86 (297)
T ss_dssp -CCCCEEEEEEETTTT---------EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCB
T ss_pred CCCcceeEEEEeCCCC---------ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccccc
Confidence 4567899999987532 1234556888999999999999999876 78999999998 7765555455 366
Q ss_pred EEEEEECCCCCEEEEee--CCCcEEE--EecCCCEEEEEEeCCCCCeeEEEEccCCCEEE-EEeCCCeEEEEeCC--CCc
Q 020798 118 VFCVNFNPQSNMIVSGA--FDETVRI--WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIV-TSSYDGLCRIWDAS--TGH 190 (321)
Q Consensus 118 v~~~~~~~~~~~l~~~~--~dg~i~~--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~d~~--~~~ 190 (321)
+.+++|+|++++|++++ .++..++ ++..+++ ...+..+ ..+..++|+|+++.++ ++..++.+++|+++ ++.
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 78899999999999988 3344444 4555544 3333333 3588899999999777 67789999999853 333
Q ss_pred eeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCC-CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC--
Q 020798 191 CMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYS-TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-- 266 (321)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-- 266 (321)
. .. ...+...+..+.|+|+|++++.++ .++.+++|++. .+..+..+..+... +......+++++|++++.+
T Consensus 165 ~-~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 165 E-TR-LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG---DWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp E-EE-CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE---EEEEEECTTSSEEEEEEEETT
T ss_pred c-eE-cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc---cCCeEECCCCCEEEEEEcCCC
Confidence 2 22 233445688999999999888766 58889999875 44555555544322 3333445789988887765
Q ss_pred ---------CeEEEEEcccceE--EEEecCCCCCeEEEEecCCCceEEEEeecC
Q 020798 267 ---------SCVYLWELQSRKV--VQKLEGHTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 267 ---------g~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
+.|++||+.+++. +..+.+|...+.+++|+|++++|++++.|.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988754 445557888999999999999999988663
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=4.1e-27 Score=215.77 Aligned_cols=284 Identities=11% Similarity=0.094 Sum_probs=197.3
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccc---cEEEEEECCCCCEEEEEeCC-------
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQ---GVSDLVFSSDSRFLVSASDD------- 94 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~---~i~~~~~~~~~~~l~~~~~d------- 94 (321)
.+.+++|+|||+++++ +.|+.+++|++.... ....+..|.. .|.+++|+|||++|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~ 88 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHS 88 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------EEEEeccccccccccceEEECCCCCEEEEEecCccceeec
Confidence 3667899999998776 789999999886532 2233344443 48999999999999998764
Q ss_pred --CcEEEEecCCcceeeee---ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCe---------
Q 020798 95 --KTIRLWDVPTATCLKTL---IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPV--------- 160 (321)
Q Consensus 95 --~~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v--------- 160 (321)
+.+.+||+.+++. ..+ .+|...+..++|+|||+.|+.++. +.|++||+.+++.......+...+
T Consensus 89 ~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp CCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHH
T ss_pred ceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECccccee
Confidence 6788999998875 223 234445788999999999998876 799999998887665554443333
Q ss_pred ---------eEEEEccCCCEEEEEeCCC----------------------------------eEEEEeCCCCceeeeecc
Q 020798 161 ---------TAVDFNRDGTMIVTSSYDG----------------------------------LCRIWDASTGHCMKTLID 197 (321)
Q Consensus 161 ---------~~~~~~~~~~~l~~~~~dg----------------------------------~i~~~d~~~~~~~~~~~~ 197 (321)
.+++|+|||+.|++++.++ .+++||+.+++....+..
T Consensus 167 ~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~ 246 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP 246 (723)
T ss_dssp HHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC
T ss_pred EEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC
Confidence 7899999999998887543 799999988765444322
Q ss_pred C-----CCCCeEEEEEccCCCEEEEEec----CCeEEEEeCCCCcEEEEEeccC-CceeEE-EeEEEecCCeEEEE--eC
Q 020798 198 D-----ENPPVSFVKFSPNGKFILVGTL----DNTLRLWNYSTGKILKTYTGHT-NSKYCI-SSTFSVTNGKYIVS--GS 264 (321)
Q Consensus 198 ~-----~~~~~~~~~~~~~g~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~l~~--~~ 264 (321)
. +...+..++|+|||+++++... +..|.+||+.+++....+..+. ...... ....+.+||+.|+. +.
T Consensus 247 ~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 326 (723)
T 1xfd_A 247 PDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI 326 (723)
T ss_dssp CCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE
T ss_pred CccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEec
Confidence 1 1345778999999998876653 2579999999988766554322 111100 01233478886664 45
Q ss_pred CCC------eEEEEE-cccce--EEEEecCCCCCeEE-EEecCCCceEEEEeecC-CccEEEcccc
Q 020798 265 EDS------CVYLWE-LQSRK--VVQKLEGHTDPVIS-VASHPTENIIASGALDN-DRTVKIWTQE 319 (321)
Q Consensus 265 ~dg------~i~vwd-~~~~~--~~~~~~~h~~~v~~-~~~~p~~~~l~s~~~d~-~~~i~iw~~~ 319 (321)
.++ .|.+|| ...++ ....+..+...+.. ++|+|+++.|+..+.++ .+.++||+.+
T Consensus 327 ~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 327 PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 666 566677 33333 14445544445555 69999999998766442 2679999864
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=8.3e-26 Score=206.59 Aligned_cols=281 Identities=16% Similarity=0.194 Sum_probs=200.5
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP 103 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 103 (321)
..|.+++|||| ++++.+. ++.+.+|++... ....+..+...+.+++|+|||++|+++ .++.|++|++.
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~---------~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLAR---------KVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTT---------EEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCC---------ceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecC
Confidence 56999999999 6655553 599999987532 123344556678889999999999885 67999999998
Q ss_pred C-----cceeeeeecCccc--------------EEEEEECCCCCEEEEee------------------------------
Q 020798 104 T-----ATCLKTLIGHTNY--------------VFCVNFNPQSNMIVSGA------------------------------ 134 (321)
Q Consensus 104 ~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~------------------------------ 134 (321)
+ ++.......+... +.++.|+|||++|++++
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 8 7654433333332 47899999999999887
Q ss_pred ---CCCcEEEEecCCCEEEEEEe--CCCCCeeEEEEccCCCEEEEEeCCC-----eEEEEeCCCCceeeeeccC-CC---
Q 020798 135 ---FDETVRIWDVKTGKCLKVLP--AHSDPVTAVDFNRDGTMIVTSSYDG-----LCRIWDASTGHCMKTLIDD-EN--- 200 (321)
Q Consensus 135 ---~dg~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~-~~--- 200 (321)
.+..|++||+.+++...... .|...+..++|+|+++.+++++.++ .|++||+.+++....+... ..
T Consensus 230 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp SCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 44679999999887654432 4556789999999999988877665 8999999988333333211 11
Q ss_pred CCeEEEEEcc--CCCEEEEEecCCeEEEEeCC-CCcEEEEEeccCCceeEEEeEEEecCCeEEE-EeCCCC----eEEEE
Q 020798 201 PPVSFVKFSP--NGKFILVGTLDNTLRLWNYS-TGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDS----CVYLW 272 (321)
Q Consensus 201 ~~~~~~~~~~--~g~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg----~i~vw 272 (321)
..+..+.|+| +|++++++..++.+++|++. +++.+..+..+...... .....++++.|+ +++.++ .|..|
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~--~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTN--FAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEE--EEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEe--eeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 1235678999 99999988889989999875 56667766655433322 123346776665 445544 67777
Q ss_pred EcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCC--ccEEEccccc
Q 020798 273 ELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND--RTVKIWTQEK 320 (321)
Q Consensus 273 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~--~~i~iw~~~~ 320 (321)
|+.+++ ...+. |...+.+++|+|++++++..+.+.+ +.|++|+.+.
T Consensus 388 d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 388 DIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp ETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred EcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 776665 33443 6677999999999999888755432 5699998754
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1.1e-25 Score=206.78 Aligned_cols=282 Identities=11% Similarity=0.089 Sum_probs=201.7
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
.|.+++|||||++|++++. +.|.+|++..... .....+..|...+..++|+|||++|+.++. +.|++||+.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~------~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK------AAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCST------TSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCc------ceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCC
Confidence 4889999999999999886 8999998864310 023345667788999999999999998874 6899999988
Q ss_pred cceeeeeecCccc----------------EEEEEECCCCCEEEEeeCCC-------------------------------
Q 020798 105 ATCLKTLIGHTNY----------------VFCVNFNPQSNMIVSGAFDE------------------------------- 137 (321)
Q Consensus 105 ~~~~~~~~~~~~~----------------v~~~~~~~~~~~l~~~~~dg------------------------------- 137 (321)
++.......+... +..++|+|||++|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 7755433333321 36789999999999887665
Q ss_pred --cEEEEecCC-CEEEEEEe--CCCCCeeEEEEccCCCEEEEEeC-----CCeEEEEeCCCCceeeeeccCCCC---CeE
Q 020798 138 --TVRIWDVKT-GKCLKVLP--AHSDPVTAVDFNRDGTMIVTSSY-----DGLCRIWDASTGHCMKTLIDDENP---PVS 204 (321)
Q Consensus 138 --~i~~wd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~~~~~~~~~~~~~~---~~~ 204 (321)
.|++||+.+ ++...... .|...+..++| |+|+.|++++. +..|++||+.+++........... .+.
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 789999988 76544332 36677899999 99998887653 568999999988765443322211 345
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCC-CCcEEEEEeccCCceeEEEeEEEecCCeEE-EEeCCCC--eEEEEEccc-ceE
Q 020798 205 FVKFSPNGKFILVGTLDNTLRLWNYS-TGKILKTYTGHTNSKYCISSTFSVTNGKYI-VSGSEDS--CVYLWELQS-RKV 279 (321)
Q Consensus 205 ~~~~~~~g~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~dg--~i~vwd~~~-~~~ 279 (321)
.++|+|+|++++++..++.++||.+. +++ ...+..+...... .....++++.| ++++.++ .+++|++.. +..
T Consensus 341 ~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~ 417 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDE--LLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ 417 (741)
T ss_dssp CCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEE--EEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC
T ss_pred ceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEe--EeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC
Confidence 68999999988888888877777665 344 5666555443322 22234677655 4556565 899999864 454
Q ss_pred EEEecCCCCCeEEEEecCCCceEEEEeecCC--ccEEEcccc
Q 020798 280 VQKLEGHTDPVISVASHPTENIIASGALDND--RTVKIWTQE 319 (321)
Q Consensus 280 ~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~--~~i~iw~~~ 319 (321)
...+.. ...+.+++|+|++++|+....+.+ ..+.+|+.+
T Consensus 418 ~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 418 PQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp CEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred eeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 556665 567889999999999888754422 457777653
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=5.7e-25 Score=208.94 Aligned_cols=279 Identities=15% Similarity=0.111 Sum_probs=215.2
Q ss_pred eeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCc
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKT 96 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~ 96 (321)
+.+.+|...+.++.|+++ .++++++.++.+.+|.+... ......+..|. .+...+|+|+|++|+.+ .++.
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~-------g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~ 266 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLD-------GKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGS 266 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETT-------SCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTE
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCC-------CCcceEecCCC-CcceeeEcCCCCEEEEE-eCCE
Confidence 345789999999999998 67778888899999976421 11223344444 45677999999999887 4889
Q ss_pred EEEEecCCcceeeeeec-----------CcccEEEEEEC-CCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCC-CeeEE
Q 020798 97 IRLWDVPTATCLKTLIG-----------HTNYVFCVNFN-PQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD-PVTAV 163 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~ 163 (321)
|.+|++...+ +..+.. |...+..++|+ |+|+.|++++ ++.+++|++..++... +..|.. .+..+
T Consensus 267 i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~ 343 (1045)
T 1k32_A 267 IYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRR 343 (1045)
T ss_dssp EEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEE
T ss_pred EEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEee
Confidence 9999985443 334433 34468899999 9999988877 7899999998776443 555666 78999
Q ss_pred EEccCCCEEEEEeCCCeEE-EEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC
Q 020798 164 DFNRDGTMIVTSSYDGLCR-IWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT 242 (321)
Q Consensus 164 ~~~~~~~~l~~~~~dg~i~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 242 (321)
+|+ +++.++.++.++.+. +||+.+++.. .+. .+...+..++|+|+|++|++++.++.|++||+.+++.......+.
T Consensus 344 ~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~ 420 (1045)
T 1k32_A 344 GGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 420 (1045)
T ss_dssp CSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred eEc-CCCeEEEEECCCceEEEEECCCCCce-Eec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC
Confidence 999 999999988888888 9998876543 333 455678899999999999999999999999999998877776665
Q ss_pred CceeEEEeEEEecCCeEEEEeCCC----------CeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCcc
Q 020798 243 NSKYCISSTFSVTNGKYIVSGSED----------SCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312 (321)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~d----------g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~ 312 (321)
.....+ .+.+||++|++++.+ +.|++||+.+++ +..+..|...+.+++|+|+|++|+.++.+ +.
T Consensus 421 ~~v~~~---~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~--~~ 494 (1045)
T 1k32_A 421 AMITDF---TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYR--SL 494 (1045)
T ss_dssp SCCCCE---EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESC--CC
T ss_pred CCccce---EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecc--cC
Confidence 554333 335899999887654 489999999877 66778888889999999999999988743 44
Q ss_pred EEEcc
Q 020798 313 VKIWT 317 (321)
Q Consensus 313 i~iw~ 317 (321)
..+|+
T Consensus 495 ~~~~~ 499 (1045)
T 1k32_A 495 DPSPD 499 (1045)
T ss_dssp CCEEC
T ss_pred CcCcc
Confidence 55554
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=5e-24 Score=178.43 Aligned_cols=270 Identities=14% Similarity=0.246 Sum_probs=179.6
Q ss_pred CCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC---CCcEEEEecCCcc--eeeeeecCccc
Q 020798 43 ADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD---DKTIRLWDVPTAT--CLKTLIGHTNY 117 (321)
Q Consensus 43 ~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~--~~~~~~~~~~~ 117 (321)
.++.+.+|.+..... .... .....+...+..++|+|+|+ |++++. ++.|.+|++.+++ .+..+..+...
T Consensus 14 ~~~~i~v~~~d~~tg----~~~~-~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~ 87 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAK----TLTN-DGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTP 87 (347)
T ss_dssp SCCEEEEEEEETTTT----EEEE-EEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred CCCCEEEEEEcCCCC----eEEE-eeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCC
Confidence 356677877643110 0011 11233456678899999999 555544 6899999997665 33344456667
Q ss_pred EEEEEECCCCCEEEEee-CCCcEEEEecCC-C--EEEEEEeCC---------CCCeeEEEEccCCCEEEEEeCCCeEEEE
Q 020798 118 VFCVNFNPQSNMIVSGA-FDETVRIWDVKT-G--KCLKVLPAH---------SDPVTAVDFNRDGTMIVTSSYDGLCRIW 184 (321)
Q Consensus 118 v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~-~--~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 184 (321)
+..++++|++++|++++ .++.+.+|++.. + +.+..+... ...+..++|+|+++++++...++.+++|
T Consensus 88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 78899999999888877 678999999953 3 223333221 1247889999999966666678899999
Q ss_pred eCC-CCceee--eeccCCCCCeEEEEEccCCCEEEEE-ecCCeEEEEeCCC--CcE--EEEEeccCCc---eeEEEeEEE
Q 020798 185 DAS-TGHCMK--TLIDDENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYST--GKI--LKTYTGHTNS---KYCISSTFS 253 (321)
Q Consensus 185 d~~-~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~-~~d~~i~i~d~~~--~~~--~~~~~~~~~~---~~~~~~~~~ 253 (321)
|+. +++... .........+..++|+|+|++++++ ..++.+.+|++.. ++. +..+...... .........
T Consensus 168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (347)
T 3hfq_A 168 NVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRL 247 (347)
T ss_dssp EECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEE
T ss_pred EECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEE
Confidence 998 443321 1222233456789999999977664 5678999999864 443 2223221111 012233344
Q ss_pred ecCCeEE-EEeCCCCeEEEEEccc---ceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 254 VTNGKYI-VSGSEDSCVYLWELQS---RKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 254 ~~~~~~l-~~~~~dg~i~vwd~~~---~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.++|++| ++...++.|.+|++.. .+.+..+..+...+.+++|+|++++|++++.+ ++.|.+|+.+
T Consensus 248 spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~~~d 316 (347)
T 3hfq_A 248 SHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN-TDNATLYARD 316 (347)
T ss_dssp CTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT-TTEEEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC-CCcEEEEEEe
Confidence 5789876 5556789999999973 24566666667778999999999999888754 4789999553
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=9.2e-25 Score=199.71 Aligned_cols=279 Identities=10% Similarity=0.129 Sum_probs=193.8
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccc-----------------cccEEEEEECCCCCEE
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGH-----------------EQGVSDLVFSSDSRFL 88 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h-----------------~~~i~~~~~~~~~~~l 88 (321)
+..+.|. |+.+++++.++ | +||+.+.... ...+..| ...|.+++|+|+ +.+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~-------~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~ 95 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSA-------QTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLV 95 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC--------------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEE
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEe-------eEEeechhHhhhhccchhccccccccCceeEEECCC-CeE
Confidence 4446777 66677777788 7 9987643210 0111111 146999999999 666
Q ss_pred EEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC-----CEEEEEEeCCCCC----
Q 020798 89 VSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT-----GKCLKVLPAHSDP---- 159 (321)
Q Consensus 89 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~-----~~~~~~~~~~~~~---- 159 (321)
+.+. ++.+++||+.+++.. .+..+...+..++|+|+|+.|+++ .++.|++||+.+ ++.......+...
T Consensus 96 ~~~~-~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g 172 (706)
T 2z3z_A 96 VLFT-QGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYG 172 (706)
T ss_dssp EEEE-TTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEES
T ss_pred EEEE-CCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcc
Confidence 5553 599999999888653 444566678889999999999885 679999999988 7655443333332
Q ss_pred ----------eeEEEEccCCCEEEEEe---------------------------------CCCeEEEEeCCCCceeeeec
Q 020798 160 ----------VTAVDFNRDGTMIVTSS---------------------------------YDGLCRIWDASTGHCMKTLI 196 (321)
Q Consensus 160 ----------v~~~~~~~~~~~l~~~~---------------------------------~dg~i~~~d~~~~~~~~~~~ 196 (321)
+.+++|+|||+.|++++ .+..|++||+.+++......
T Consensus 173 ~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~ 252 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT 252 (706)
T ss_dssp SCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC
T ss_pred cchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc
Confidence 47899999999999887 44679999999876543322
Q ss_pred c-CCCCCeEEEEEccCCCEEEEEecCC-----eEEEEeCCCCcEEEEEe-ccCCc-eeEEEeEEEec--CCeEEEEeCCC
Q 020798 197 D-DENPPVSFVKFSPNGKFILVGTLDN-----TLRLWNYSTGKILKTYT-GHTNS-KYCISSTFSVT--NGKYIVSGSED 266 (321)
Q Consensus 197 ~-~~~~~~~~~~~~~~g~~l~~~~~d~-----~i~i~d~~~~~~~~~~~-~~~~~-~~~~~~~~~~~--~~~~l~~~~~d 266 (321)
. .+...+..++|+|+|++|++++.++ .|.+||+.+++....+. ..... ...+......+ +|+++++++.|
T Consensus 253 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC
Confidence 2 3345678999999999999887775 89999999884333332 21111 00011123346 89999999999
Q ss_pred CeEEEEEcc-cceEEEEecCCCCCeEE-EEecCCCceEEEEeecCC---ccEEEcccc
Q 020798 267 SCVYLWELQ-SRKVVQKLEGHTDPVIS-VASHPTENIIASGALDND---RTVKIWTQE 319 (321)
Q Consensus 267 g~i~vwd~~-~~~~~~~~~~h~~~v~~-~~~~p~~~~l~s~~~d~~---~~i~iw~~~ 319 (321)
|.+++|++. .++.+..+..|...+.+ ++|+|+++.|+.++.+++ ..|..|+.+
T Consensus 333 g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 333 GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 999999886 56777788888888887 799999998877765432 255555543
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=3.1e-25 Score=203.33 Aligned_cols=283 Identities=12% Similarity=0.056 Sum_probs=192.0
Q ss_pred eeeeccCCcc---cEEEEEECCCCCEEEEecCC---------ceEEEeeccccCCCCCCCCCcccccccccccEEEEEEC
Q 020798 15 LTQTLNGHLR---AISSVKFSHDGRLLASSSAD---------KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFS 82 (321)
Q Consensus 15 ~~~~~~~h~~---~v~~~~~s~~g~~l~~~~~d---------~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~ 82 (321)
..+.+.+|.. .|.+++|||||++|++++.+ +.+.+|++..... ..+....+|...+..++|+
T Consensus 49 ~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~l~~~~~~~~~~~~~~~S 122 (723)
T 1xfd_A 49 STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP------QSLDPPEVSNAKLQYAGWG 122 (723)
T ss_dssp CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC------EECCCTTCCSCCCSBCCBC
T ss_pred EEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce------EeccCCccccccccccEEC
Confidence 3445556654 49999999999999998764 7788998864321 1222334555568899999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccE------------------EEEEECCCCCEEEEeeCCC-------
Q 020798 83 SDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYV------------------FCVNFNPQSNMIVSGAFDE------- 137 (321)
Q Consensus 83 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~l~~~~~dg------- 137 (321)
|||+.|+.++. +.|++||+.+++.......+...+ ..++|+|||+.|++++.++
T Consensus 123 PdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~ 201 (723)
T 1xfd_A 123 PKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIME 201 (723)
T ss_dssp SSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEE
T ss_pred CCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEE
Confidence 99999998876 789999998887655444333322 6899999999998887543
Q ss_pred ---------------------------cEEEEecCCCEEEEEEeCC------CCCeeEEEEccCCCEEEEEeC----CCe
Q 020798 138 ---------------------------TVRIWDVKTGKCLKVLPAH------SDPVTAVDFNRDGTMIVTSSY----DGL 180 (321)
Q Consensus 138 ---------------------------~i~~wd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----dg~ 180 (321)
.|++||+.+++....+..+ ...+..++|+|||+.+++... +..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 281 (723)
T 1xfd_A 202 LPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSI 281 (723)
T ss_dssp ECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEE
T ss_pred eeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEE
Confidence 7999999888754555443 456889999999998876643 357
Q ss_pred EEEEeCCCCceeeeeccCCCCCe----EEEEEccCCCEEEEE--ecCC------eEEEEe-CCCCcE--EEEEeccCCce
Q 020798 181 CRIWDASTGHCMKTLIDDENPPV----SFVKFSPNGKFILVG--TLDN------TLRLWN-YSTGKI--LKTYTGHTNSK 245 (321)
Q Consensus 181 i~~~d~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~l~~~--~~d~------~i~i~d-~~~~~~--~~~~~~~~~~~ 245 (321)
|++||+.+++........+...+ ..++|+|+|+.|+.. ..++ .|.+|| ...++. ...+.......
T Consensus 282 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 361 (723)
T 1xfd_A 282 LTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV 361 (723)
T ss_dssp EEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE
T ss_pred EEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEE
Confidence 99999998876544322222222 267899999977654 4566 577777 344431 33333222221
Q ss_pred eEEEeEEEecCCeEEEEe-CCC--CeEEEEEcccce--EEEEecC---CCCCeEEEEecCCCceEEEEe
Q 020798 246 YCISSTFSVTNGKYIVSG-SED--SCVYLWELQSRK--VVQKLEG---HTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~-~~d--g~i~vwd~~~~~--~~~~~~~---h~~~v~~~~~~p~~~~l~s~~ 306 (321)
.......++|+.|+.. ..+ +.+++|++.... ....+.. |...+..++|+|++++|+...
T Consensus 362 --~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 362 --TKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp --EEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred --EeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 2222345788877654 444 789999986432 2334443 567789999999999888754
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=1.8e-24 Score=180.02 Aligned_cols=263 Identities=11% Similarity=0.104 Sum_probs=191.0
Q ss_pred CEEEEecCCceEEEeeccccCCCCCCCCCcccccc-cccc-cEEEEEECCCCCEEE-EEeCCCcEEEEecCCcceeeeee
Q 020798 36 RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT-GHEQ-GVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLI 112 (321)
Q Consensus 36 ~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~-~h~~-~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~ 112 (321)
++|++++.++.|.+||.... ..+..+. ++.. .+..++|+|++++++ ++..++.|.+||+.+++....+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 73 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM--------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID 73 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred cEEEEcCCCCeEEEEECCCC--------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEE
Confidence 47889999999999987532 1222332 1211 478899999998664 55667899999999888766554
Q ss_pred c-C----cccEEEEEECCCCCEEEEee------------CCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE
Q 020798 113 G-H----TNYVFCVNFNPQSNMIVSGA------------FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 113 ~-~----~~~v~~~~~~~~~~~l~~~~------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
. + ...+..++++|++++++++. .++.|.+||+.+++....+.. ...+..++|+|+++.++++
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe
Confidence 2 1 22566889999999988875 579999999999888777765 4457889999999988777
Q ss_pred eCCCeEEEEeCCCCceeeeeccCC-CCCeEEEEEccCCCEEEEEecCC------------------------eEEEEeCC
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDE-NPPVSFVKFSPNGKFILVGTLDN------------------------TLRLWNYS 230 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~d~------------------------~i~i~d~~ 230 (321)
++.+.+||+.+++....+.... ..+ +.|+|+|+.++.....+ .|.+||+.
T Consensus 153 --~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 153 --GRDLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp --SSSEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred --CCeEEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 6889999999887765553332 122 26789888765544322 47899999
Q ss_pred CCcEEE-EEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecC
Q 020798 231 TGKILK-TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 231 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
+++... .+..+..... .....+++++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~---~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~-- 299 (337)
T 1pby_B 228 TGEMAMREVRIMDVFYF---STAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGA-- 299 (337)
T ss_dssp TCCEEEEEEEECSSCEE---EEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESB--
T ss_pred CCCceEeecCCCCCcee---eEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcC--
Confidence 887652 1222222222 23345788888887 799999999998888777644 45789999999998888753
Q ss_pred CccEEEccccc
Q 020798 310 DRTVKIWTQEK 320 (321)
Q Consensus 310 ~~~i~iw~~~~ 320 (321)
++.|++||.+.
T Consensus 300 ~~~i~v~d~~~ 310 (337)
T 1pby_B 300 LGDLAAYDAET 310 (337)
T ss_dssp SSEEEEEETTT
T ss_pred CCcEEEEECcC
Confidence 58899999863
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=8.9e-24 Score=176.19 Aligned_cols=269 Identities=11% Similarity=0.159 Sum_probs=180.9
Q ss_pred CCcccEEEEEECCCCCEEEEecCC-ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-CCcEE
Q 020798 21 GHLRAISSVKFSHDGRLLASSSAD-KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-DKTIR 98 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d-~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-d~~i~ 98 (321)
.|...+.+++|+|+|++|++++.+ +.+.+|++... ......+..+..+. .+..++|+|++++|++++. ++.|.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD----DGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVS 109 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT----TCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCC----CCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEE
Confidence 466788999999999988888776 99999987521 01111223333333 7889999999998876654 78899
Q ss_pred EEecC---CcceeeeeecCcccEEEEEECCCCCEEEEee-CCCcEEEEecCC-CEEEE----EEeC-CCCCeeEEEEccC
Q 020798 99 LWDVP---TATCLKTLIGHTNYVFCVNFNPQSNMIVSGA-FDETVRIWDVKT-GKCLK----VLPA-HSDPVTAVDFNRD 168 (321)
Q Consensus 99 iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~-~~~~~----~~~~-~~~~v~~~~~~~~ 168 (321)
+||+. ..+....+.. ...+.+++|+|+++++++++ .++.|++||+.+ ++... .... ....+..++|+|+
T Consensus 110 ~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp EEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred EEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC
Confidence 99994 3333333333 34578899999999888776 889999999987 54332 2222 3456788999999
Q ss_pred CCEEEEEe-CCCeEEEEeCCC--Cce--eeeec--c-C--CCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCC--C--Cc
Q 020798 169 GTMIVTSS-YDGLCRIWDAST--GHC--MKTLI--D-D--ENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYS--T--GK 233 (321)
Q Consensus 169 ~~~l~~~~-~dg~i~~~d~~~--~~~--~~~~~--~-~--~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~--~--~~ 233 (321)
++.+++++ .++.+.+||+.. +.. ..... . . ....+..++|+|+|++|+++. .++.|.+||+. + .+
T Consensus 189 g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~ 268 (343)
T 1ri6_A 189 EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 268 (343)
T ss_dssp SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE
Confidence 99776554 789999999953 322 11111 1 1 122456799999999887655 68999999998 2 33
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeC-CCCeEEEEEcc--cce--EEEEecCCCCCeEEEEecCCCc
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGS-EDSCVYLWELQ--SRK--VVQKLEGHTDPVISVASHPTEN 300 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~--~~~--~~~~~~~h~~~v~~~~~~p~~~ 300 (321)
.+..+..+.. ... ....+++++|++++ .++.|.+|++. +++ .+..+... ....+++|.|+.+
T Consensus 269 ~~~~~~~~~~-~~~---~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 269 KEGFQPTETQ-PRG---FNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEECSSS-CCC---EEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred EeeeecCCCc-cce---EEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccC
Confidence 4444443332 222 23347888777776 68999999654 443 34444442 3457778877654
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=2.3e-24 Score=204.84 Aligned_cols=275 Identities=12% Similarity=0.080 Sum_probs=207.4
Q ss_pred CcccEEEEEEC-CCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccc-cEEEEEECCCCCEEEEEeCCCcEE-
Q 020798 22 HLRAISSVKFS-HDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQ-GVSDLVFSSDSRFLVSASDDKTIR- 98 (321)
Q Consensus 22 h~~~v~~~~~s-~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~~~~~~l~~~~~d~~i~- 98 (321)
|...+.+++|+ |||++|++++ ++.+.+|+.... ....+..|.. .+..++|+ +|+.|++++.++.+.
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~ 362 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT---------YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLG 362 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS---------BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC---------ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEE
Confidence 45578999999 9999999887 788988876431 1233456666 89999999 999999998888888
Q ss_pred EEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCC
Q 020798 99 LWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 99 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
+|++.+++.. .+.+|...+..++|+|+|++|++++.++.|++||+.+++.......|...+..++|+|+|+.+++++.+
T Consensus 363 ~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 363 IYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred EEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 8998877643 344777889999999999999999999999999999998877777888899999999999999887764
Q ss_pred C----------eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE-------E------
Q 020798 179 G----------LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI-------L------ 235 (321)
Q Consensus 179 g----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~-------~------ 235 (321)
+ .+++||+.+++ ...+ ..+...+..++|+|+|++|+.++.++...+|+...... +
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~-~~~l-~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRK-IFAA-TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLI 519 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTE-EEEC-SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESS
T ss_pred ccccccCCCCCeEEEEECCCCc-EEEe-eCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeC
Confidence 4 89999999876 3333 33445577899999999999988877777776433221 0
Q ss_pred ------------------------------EEEeccCCceeEEEeEEEecCCeEEEE-------------eCCCCeEEEE
Q 020798 236 ------------------------------KTYTGHTNSKYCISSTFSVTNGKYIVS-------------GSEDSCVYLW 272 (321)
Q Consensus 236 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------~~~dg~i~vw 272 (321)
..+..+... +......+++.++++ ......|.+|
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~---~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 596 (1045)
T 1k32_A 520 PGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGD---YRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKY 596 (1045)
T ss_dssp TTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBC---EEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEE
T ss_pred CCCCCccccCcCccccccccccccCHhHceEEcCCCCCC---hhheEEcCCCeEEEEecccCcccccccccCCCceEEEE
Confidence 111111111 222333567887775 1235578899
Q ss_pred EcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 273 ELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 273 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
|+.+++.. .+. ..+.+++|+|||++|++++.| .|++|+.+.
T Consensus 597 d~~~~~~~-~l~---~~v~~~~~S~DG~~l~~~~~~---~i~~~d~~~ 637 (1045)
T 1k32_A 597 DVKTRKVT-EVK---NNLTDLRLSADRKTVMVRKDD---GKIYTFPLE 637 (1045)
T ss_dssp ETTTCCEE-EEE---EEEEEEEECTTSCEEEEEETT---SCEEEEESS
T ss_pred ECCCCcEE-Eee---cCcceEEECCCCCEEEEEcCC---cEEEEeCcc
Confidence 99887643 232 568899999999999998633 699999854
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=8.9e-25 Score=195.45 Aligned_cols=274 Identities=12% Similarity=0.045 Sum_probs=192.6
Q ss_pred cccEEEEEECCCCCEEEEecC-CceEEEeeccccCCCCCCCCCccccccccc-ccEEEEEECCCCCEEEEEeC---CCcE
Q 020798 23 LRAISSVKFSHDGRLLASSSA-DKTLLTYSLSSISNSDSTPPSPLQKFTGHE-QGVSDLVFSSDSRFLVSASD---DKTI 97 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~~~~~~~l~~~~~---d~~i 97 (321)
..+|.+++|+|||++||+++. |+.+.+|++... ....+..|. ..+..++|+|| +.++++.. +...
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g---------~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~ 90 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG---------ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQH 90 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT---------EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC---------CcEeeecccccccccccCCCC-eEEEEeccCCCCcce
Confidence 557999999999999999887 999999986321 123344455 68999999999 77777765 4556
Q ss_pred EEEecCC--cceeeeeecCcccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEE
Q 020798 98 RLWDVPT--ATCLKTLIGHTNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 98 ~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 174 (321)
++|.+.. ......+.... .....+|+|+++. +++.+.++.+.+||+.+++.......+. .+++|+|||+.+++
T Consensus 91 ~l~~~~~~~~g~~~~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~ 166 (582)
T 3o4h_A 91 ALFKVNTSRPGEEQRLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAG 166 (582)
T ss_dssp EEEEEETTSTTCCEECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEE
T ss_pred EEEEEeccCCCccccccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEE
Confidence 6665433 21112332222 2335678888753 3344444555699999887665544333 78999999999998
Q ss_pred EeCC----CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC--eEEEEeCCCCcEEEEEeccCCceeEE
Q 020798 175 SSYD----GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN--TLRLWNYSTGKILKTYTGHTNSKYCI 248 (321)
Q Consensus 175 ~~~d----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~ 248 (321)
++.+ +.|++||+.+++.. .+ ..+...+..++|+|||+.|+++..++ .|.+||+.+++.. .+..+......+
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~-~l-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~ 243 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLR-VF-DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSY 243 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCE-EE-CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHH
T ss_pred EEEcCCCCeEEEEEcCCCCCce-Ee-ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhh
Confidence 8766 78999999887654 33 34455678899999999999877888 8999999988877 555544322211
Q ss_pred -----EeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCC-ccEEEcccc
Q 020798 249 -----SSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDND-RTVKIWTQE 319 (321)
Q Consensus 249 -----~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~-~~i~iw~~~ 319 (321)
......+||.++++++.++.+++|++ ++... .+...|.+++|+ +++++++++.+.. ..+.+|+.+
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 11113478888999999999999999 65543 345678999999 9999988876532 446677653
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1e-23 Score=181.32 Aligned_cols=208 Identities=16% Similarity=0.119 Sum_probs=158.3
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCC--cc-----cccccccccEEEEEECCCCCEEE----EE
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPS--PL-----QKFTGHEQGVSDLVFSSDSRFLV----SA 91 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~--~~-----~~~~~h~~~i~~~~~~~~~~~l~----~~ 91 (321)
...++.+++++++.++++++.++ +++|+............. .+ .....+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 44688999999999999999888 888876543221111000 00 01123556799999999999999 78
Q ss_pred eCCCcEEEEecCCc--------ce---eeeeecCcccEEEEEECCC-CCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCC
Q 020798 92 SDDKTIRLWDVPTA--------TC---LKTLIGHTNYVFCVNFNPQ-SNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP 159 (321)
Q Consensus 92 ~~d~~i~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 159 (321)
+.|+.|++||+.+. +. ...+.+|...|.+++|+|+ +++|++++.||+|++||++++........|...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 88999999998654 11 3445679999999999998 789999999999999999998776666778889
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccC------CCCCeEEEEEccCCCEEEEEe-cCC------eEEE
Q 020798 160 VTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDD------ENPPVSFVKFSPNGKFILVGT-LDN------TLRL 226 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~l~~~~-~d~------~i~i 226 (321)
+.+++|+|++++|++++.||.|++||.+ ++....+... +...+..+.|++++.++++.. .+| .+++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 9999999999999999999999999998 4433333211 112678899999988776543 343 3899
Q ss_pred EeCCCC
Q 020798 227 WNYSTG 232 (321)
Q Consensus 227 ~d~~~~ 232 (321)
|++++.
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 998764
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=6.9e-23 Score=170.23 Aligned_cols=274 Identities=11% Similarity=0.139 Sum_probs=181.2
Q ss_pred eeeeeccCCcccEEEEEECCCCCEEEEecC-CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe
Q 020798 14 TLTQTLNGHLRAISSVKFSHDGRLLASSSA-DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS 92 (321)
Q Consensus 14 ~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~ 92 (321)
++...+..+...+ .++|+|+|+++++++. ++.+.+|+...... ....+..+.....+++|+|++++++++.
T Consensus 31 ~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 102 (331)
T 3u4y_A 31 EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-------KVVAIQEGQSSMADVDITPDDQFAVTVT 102 (331)
T ss_dssp CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-------EEEEEEECSSCCCCEEECTTSSEEEECC
T ss_pred ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-------eEEecccCCCCccceEECCCCCEEEEec
Confidence 3444445556667 9999999997666554 88999998754211 1334445555555599999999998555
Q ss_pred CCC---cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEe-eCCCc-EEEEecCCCEEE----EEEeCCCCCeeEE
Q 020798 93 DDK---TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG-AFDET-VRIWDVKTGKCL----KVLPAHSDPVTAV 163 (321)
Q Consensus 93 ~d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~~wd~~~~~~~----~~~~~~~~~v~~~ 163 (321)
.++ .|.+||+.+++.+..+.. ......++|+|++++++++ ..++. |.+|++.....+ ............+
T Consensus 103 ~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 181 (331)
T 3u4y_A 103 GLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNI 181 (331)
T ss_dssp CSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEE
T ss_pred CCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccce
Confidence 553 899999999887766554 3446899999999865544 55688 999998754322 1122334567899
Q ss_pred EEccCCCEEEEE-eCCCeEEEEeCCCCce---eeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcE--EE
Q 020798 164 DFNRDGTMIVTS-SYDGLCRIWDASTGHC---MKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKI--LK 236 (321)
Q Consensus 164 ~~~~~~~~l~~~-~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~--~~ 236 (321)
+|+|+++.++++ ..++.|.+||+.+++. +..+.. ...+..++|+|+|++++++. .++.|.+||+.+++. +.
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT--NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeec
Confidence 999999966554 5689999999998876 555432 24456789999999877665 467899999998876 44
Q ss_pred EEecc----CCceeEEEeEEEecCCeEEE-EeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCC
Q 020798 237 TYTGH----TNSKYCISSTFSVTNGKYIV-SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299 (321)
Q Consensus 237 ~~~~~----~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~ 299 (321)
.+... .............+++++|+ ++..++.|.+||+..... ..+.+....-....++|+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 260 SFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV-GYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp EEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE-EECTTCCCBSCEEECCCC-
T ss_pred ccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc-cceecccccCCeEEECCcc
Confidence 44322 11111101123347787765 455677999999976543 3333333222234445543
No 149
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.93 E-value=6.1e-24 Score=180.48 Aligned_cols=293 Identities=12% Similarity=0.078 Sum_probs=193.3
Q ss_pred eeeeccCCcccEEE-----EEECCCCCEEEEecC-Cce--EEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCC
Q 020798 15 LTQTLNGHLRAISS-----VKFSHDGRLLASSSA-DKT--LLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSR 86 (321)
Q Consensus 15 ~~~~~~~h~~~v~~-----~~~s~~g~~l~~~~~-d~~--v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~ 86 (321)
....+..|...... ++|||||++|+.++. ++. +.+|++... ...+...++...+..+.|+|+|+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g--------~~~~lt~~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ--------VATQLTEGRGDNTFGGFLSPDDD 93 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTC--------EEEECCCSSCBCSSSCEECTTSS
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCC--------ceEEeeeCCCCCccceEEcCCCC
Confidence 34556777766666 899999999998887 664 666665432 12223334444455678999999
Q ss_pred EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEE--EECCCCCEEEEe----------------------eCCCcEEEE
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCV--NFNPQSNMIVSG----------------------AFDETVRIW 142 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~----------------------~~dg~i~~w 142 (321)
.|+.++.++.|++||+.+++.......+...+... .++|++..++.. ..+..|++|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 99999999999999999987655555555544333 348999888742 244689999
Q ss_pred ecCCCEEEEEEeCCCCCeeEEEEcc-CCCEEEEEeCC------CeEEEEeCCCCceeeeeccCCC-CCeEEEEEccCCCE
Q 020798 143 DVKTGKCLKVLPAHSDPVTAVDFNR-DGTMIVTSSYD------GLCRIWDASTGHCMKTLIDDEN-PPVSFVKFSPNGKF 214 (321)
Q Consensus 143 d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~ 214 (321)
|+.+++.... ..+...+..++|+| +++.++.+..+ ..+.++|...+.. ..+..... ..+....|+|+|+.
T Consensus 174 d~~~g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 174 DLKTGESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp ETTTCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSC
T ss_pred ECCCCceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCE
Confidence 9998865443 34566789999999 99988877653 3788888765543 23322221 24667899999997
Q ss_pred EEEEec-CC----eEEEEeCCCCcEEE--EEeccCCceeEEEeEEEecCCeEEEEe---------CCCCeEEEEEcccce
Q 020798 215 ILVGTL-DN----TLRLWNYSTGKILK--TYTGHTNSKYCISSTFSVTNGKYIVSG---------SEDSCVYLWELQSRK 278 (321)
Q Consensus 215 l~~~~~-d~----~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~dg~i~vwd~~~~~ 278 (321)
|+..+. ++ .|.+||+.+++... .+.++.............+||+.|+.. ..+..|++||+.+++
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 765443 22 39999999887433 232210000000000123577766643 456789999998876
Q ss_pred EEEEecCCCC-----------CeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 279 VVQKLEGHTD-----------PVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 279 ~~~~~~~h~~-----------~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
. ..+..|.. .+.+++|+|||+.|+..+. .++...||.++
T Consensus 332 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~-~~g~~~l~~~~ 381 (388)
T 3pe7_A 332 Q-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD-VHGKPALYLAT 381 (388)
T ss_dssp E-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC-TTSSCEEEEEE
T ss_pred e-EEeccccCcccccccccccCCCCccCCCCCCEEEEEec-CCCceeEEEEE
Confidence 5 44555554 5788999999999998774 45677777654
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=1.4e-22 Score=170.48 Aligned_cols=276 Identities=13% Similarity=0.198 Sum_probs=178.6
Q ss_pred CCCEEEEe----cCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC----CcEEEEecCC-
Q 020798 34 DGRLLASS----SADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD----KTIRLWDVPT- 104 (321)
Q Consensus 34 ~g~~l~~~----~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d----~~i~iwd~~~- 104 (321)
+..++++| +.++.+.+|.+.... .....+... +...+..++|+|+|++|++++.+ +.|.+|++..
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~----g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEET----GESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTT----CCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCC----CCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC
Confidence 33455555 345688888764311 111122222 56667889999999999988876 7999998865
Q ss_pred -cc--eeeeeecCcccEEEEEECCCCCEEEEee-CCCcEEEEecCCCEEEEE----Ee--C--------CCCCeeEEEEc
Q 020798 105 -AT--CLKTLIGHTNYVFCVNFNPQSNMIVSGA-FDETVRIWDVKTGKCLKV----LP--A--------HSDPVTAVDFN 166 (321)
Q Consensus 105 -~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~----~~--~--------~~~~v~~~~~~ 166 (321)
++ .+.....+......+++ +++++++++ .++.+.+|++.....+.. .. . +...+.+++|+
T Consensus 86 ~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 86 KGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp TTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred CCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 33 22333334555667777 777776665 678999999875432211 11 1 12235789999
Q ss_pred cCCCEEEEEe-CCCeEEEEeCCCCce------e------eeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCC
Q 020798 167 RDGTMIVTSS-YDGLCRIWDASTGHC------M------KTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTG 232 (321)
Q Consensus 167 ~~~~~l~~~~-~dg~i~~~d~~~~~~------~------~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~ 232 (321)
|+++.+++++ .++.+.+|++..... + .............++|+|+|++++++. .++.|.+||+.++
T Consensus 164 pdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 164 PDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 9999766555 588999998764321 1 122223344577899999999888777 5899999999876
Q ss_pred cE--EEEEeccCCceeEEEeEEEecCCeEEEEeCC--CCeEEEEEcc--cce--EEEEecCCCCCeEEEEecCCCceEEE
Q 020798 233 KI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSE--DSCVYLWELQ--SRK--VVQKLEGHTDPVISVASHPTENIIAS 304 (321)
Q Consensus 233 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--dg~i~vwd~~--~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s 304 (321)
+. +..+................++|++|++++. ++.|.+|++. +++ .+..+.. ...+.+++|+|++++|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 244 MLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLV 322 (361)
T ss_dssp EEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEE
T ss_pred ceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEE
Confidence 54 2333222111111223334578988866554 5899999995 343 4444544 456789999999999988
Q ss_pred EeecCCccEEEcccc
Q 020798 305 GALDNDRTVKIWTQE 319 (321)
Q Consensus 305 ~~~d~~~~i~iw~~~ 319 (321)
++.+ ++.|.+|..+
T Consensus 323 ~~~~-~~~v~v~~~d 336 (361)
T 3scy_A 323 ACRD-TNVIQIFERD 336 (361)
T ss_dssp EETT-TTEEEEEEEC
T ss_pred EECC-CCCEEEEEEE
Confidence 8754 4789997654
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1.5e-22 Score=169.49 Aligned_cols=243 Identities=13% Similarity=0.113 Sum_probs=182.8
Q ss_pred cccEEEEEECCCCCEEEEEeC-------CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCCcEEEEec
Q 020798 73 EQGVSDLVFSSDSRFLVSASD-------DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDETVRIWDV 144 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~ 144 (321)
...+..++|+|+++++++++. ++.|.+||..+++....+.. ...+..++++|+++.++ +...++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 456889999999998887764 56899999999887766653 33467889999999654 5556799999999
Q ss_pred CCCEEEEEEeCCCCC---------eeEEEEccCCCEEEEEe--CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC
Q 020798 145 KTGKCLKVLPAHSDP---------VTAVDFNRDGTMIVTSS--YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK 213 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 213 (321)
.+++....+..+... +..++|+|+++.+++++ .++.|.+||..+++....+. .....+..++|+|+|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEETTTT
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccceEEECCCCC
Confidence 999888777665422 67899999999777665 47899999999887766653 1233466789999999
Q ss_pred EEEEEecCCeEEEEeCCCCcEEEEEeccCC-ceeEEEeEEEecCCeEEEEe-CCCCeEEEEEcccceEEEEecCCCCCeE
Q 020798 214 FILVGTLDNTLRLWNYSTGKILKTYTGHTN-SKYCISSTFSVTNGKYIVSG-SEDSCVYLWELQSRKVVQKLEGHTDPVI 291 (321)
Q Consensus 214 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~h~~~v~ 291 (321)
+++++..++.|.+||+.+++.+..+..... ...........+++++++++ ..++.|.+||+.+++.+..+.... + .
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~-~ 275 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-S-L 275 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-C-C
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-C-c
Confidence 999999999999999999998877754221 11112222334677655544 556999999999998887776543 2 6
Q ss_pred EEEecCCCceEEEEeecCCccEEEccccc
Q 020798 292 SVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 292 ~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.++|+|+++++..+.. .++.|.+||.+.
T Consensus 276 ~~~~s~dg~~l~v~~~-~~~~v~~~d~~~ 303 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHR-QAGKVSVIDAKS 303 (353)
T ss_dssp CEEEETTTTEEEEEET-TTTEEEEEETTT
T ss_pred eEEECCCCCEEEEEEC-CCCeEEEEECCC
Confidence 7999999997666543 358999999853
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=2.7e-23 Score=169.44 Aligned_cols=233 Identities=18% Similarity=0.211 Sum_probs=165.3
Q ss_pred eccCCcccEEEEEECCCCCEEEEecCCceEEEeeccc-cCCCCCCCCCcccccccc-cccEEEEEECCCCCEEEEEe--C
Q 020798 18 TLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSS-ISNSDSTPPSPLQKFTGH-EQGVSDLVFSSDSRFLVSAS--D 93 (321)
Q Consensus 18 ~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~-~~~~~~~~~~~~~~~~~h-~~~i~~~~~~~~~~~l~~~~--~ 93 (321)
.+..|...|.+++|+|+|++|++++ ++.+.+|++.. .. .......| ...+.+++|+|++++|++++ .
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~--------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 106 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS--------PEKVDTGFATICNNDHGISPDGALYAISDKVE 106 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS--------CEECCCTTCCCBCSCCEECTTSSEEEEEECTT
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC--------ceEeccccccccccceEECCCCCEEEEEEeCC
Confidence 4556888999999999999999987 78999998764 21 12223333 36788999999999999988 3
Q ss_pred CCcEEEEe--cCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCCcEEEEecC--CCEEEEEEeCCCCCeeEEEEccC
Q 020798 94 DKTIRLWD--VPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDETVRIWDVK--TGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 94 d~~i~iwd--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~--~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
++...+|. ..++. ...+..+ ..+..++|+|+++.|+ +++.++.+++|++. +++ ...+..+...+.+++|+|+
T Consensus 107 ~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~d 183 (297)
T 2ojh_A 107 FGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPD 183 (297)
T ss_dssp TSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTT
T ss_pred CCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCC
Confidence 34555554 44444 3333333 3488899999999877 77889999999853 333 4455667788999999999
Q ss_pred CCEEEEEe-CCCeEEEEeCC-CCceeeeeccCCCCCeEEEEEccCCCEEEEEecC-----------CeEEEEeCCCCcEE
Q 020798 169 GTMIVTSS-YDGLCRIWDAS-TGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD-----------NTLRLWNYSTGKIL 235 (321)
Q Consensus 169 ~~~l~~~~-~dg~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d-----------~~i~i~d~~~~~~~ 235 (321)
++.+++++ .++.+++|++. .+.....+ ..+...+..+.|+|+|++|++++.+ +.|.+||+.+++..
T Consensus 184 g~~l~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 184 GRWIYFNSSRTGQMQIWRVRVDGSSVERI-TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSSCEEEC-CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred CCEEEEEecCCCCccEEEECCCCCCcEEE-ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 99887666 58889999875 33333333 3344567789999999999888765 56999999887653
Q ss_pred E--EEeccCCceeEEEeEEEecCCeEEEEeCCC
Q 020798 236 K--TYTGHTNSKYCISSTFSVTNGKYIVSGSED 266 (321)
Q Consensus 236 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 266 (321)
. .+.++......+ .+.+++++|++++.+
T Consensus 263 ~~~~~~~~~~~~~~~---~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 263 TLFDLFGGQGTMNSP---NWSPDGDEFAYVRYF 292 (297)
T ss_dssp EEEEEEESTTTSCSC---CBCTTSSEEEEEEEC
T ss_pred eeeccCCCCcccccc---eECCCCCEEEEEEec
Confidence 3 333444443332 234788888777654
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.4e-22 Score=168.51 Aligned_cols=245 Identities=12% Similarity=0.096 Sum_probs=179.1
Q ss_pred cEEEEEECCCCCEE-EEecCCceEEEeeccccCCCCCCCCCccccccc-----ccccEEEEEECCCCCEEEEEe------
Q 020798 25 AISSVKFSHDGRLL-ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTG-----HEQGVSDLVFSSDSRFLVSAS------ 92 (321)
Q Consensus 25 ~v~~~~~s~~g~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~i~~~~~~~~~~~l~~~~------ 92 (321)
.+..++|+|+|+++ ++++.++.|.+|++.... .+..+.. |...+..++|+|+|++|+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 106 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--------TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE 106 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--------EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--------eEeeEEcCCcccccccccceEECCCCCEEEEEecccccc
Confidence 47789999999865 556678899999875421 1222221 223567899999999988886
Q ss_pred ------CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEc
Q 020798 93 ------DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 93 ------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~ 166 (321)
.++.|.+||+.+++....+.. ...+..++|+|++++++++ ++.|++||+.+++....+..+... ..+.|+
T Consensus 107 ~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s 182 (337)
T 1pby_B 107 LTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AETYAQ 182 (337)
T ss_dssp SSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTTBCC
T ss_pred cccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCceeC
Confidence 579999999998877665543 4456788999999988877 688999999999887776654311 133788
Q ss_pred cCCCEEEEEeC-CC-----------------------eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC
Q 020798 167 RDGTMIVTSSY-DG-----------------------LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN 222 (321)
Q Consensus 167 ~~~~~l~~~~~-dg-----------------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~ 222 (321)
|++..++..+. ++ .+.+||+.+++............+..++|+|+|++++++ ++
T Consensus 183 ~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~ 260 (337)
T 1pby_B 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YN 260 (337)
T ss_dssp CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ES
T ss_pred CCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CC
Confidence 98876654432 22 468999988776422222333456789999999999887 78
Q ss_pred eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC
Q 020798 223 TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287 (321)
Q Consensus 223 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~ 287 (321)
.|.+||+.+++.+..+..... ... ....+++++|++++.++.|++||+.+++.+..+..+.
T Consensus 261 ~v~~~d~~~~~~~~~~~~~~~-~~~---~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 261 VLESFDLEKNASIKRVPLPHS-YYS---VNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEEEETTTTEEEEEEECSSC-CCE---EEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred eEEEEECCCCcCcceecCCCc-eee---EEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 999999999988877764432 222 2334788888888899999999999998887776543
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=6.5e-22 Score=165.36 Aligned_cols=234 Identities=12% Similarity=0.109 Sum_probs=172.0
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCc-ccEEEEEECCCCCEEE-EeeCCCcEEEEecCCCEEEEEEeCC
Q 020798 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHT-NYVFCVNFNPQSNMIV-SGAFDETVRIWDVKTGKCLKVLPAH 156 (321)
Q Consensus 79 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~ 156 (321)
++++++++++++++.++.|.+||+.+++....+..+. ..+..++++|+++.++ ++..++.|.+||+.+++....+...
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 4677888899999999999999999988777665443 1467889999998654 5567899999999999887776643
Q ss_pred C------CCeeEEEEccCCCEEEEEeCC------------CeEEEEeCCCCceeeeec-cCCCCCeEEEEEccCCCEEEE
Q 020798 157 S------DPVTAVDFNRDGTMIVTSSYD------------GLCRIWDASTGHCMKTLI-DDENPPVSFVKFSPNGKFILV 217 (321)
Q Consensus 157 ~------~~v~~~~~~~~~~~l~~~~~d------------g~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~ 217 (321)
. ..+..++|+|+++.+++++.+ +.|.+||+.+++...... ......+..++|+|+|+ +++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEE
Confidence 3 237889999999999888865 899999998754322111 11223467788999999 555
Q ss_pred EecCCeEEEEeCCCCcEEEEEeccCC------------------------ceeEE-------------------------
Q 020798 218 GTLDNTLRLWNYSTGKILKTYTGHTN------------------------SKYCI------------------------- 248 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~~~~~~~~~~------------------------~~~~~------------------------- 248 (321)
++ +.|.+||+.+++.+..+..... ....+
T Consensus 164 ~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 43 3499999999888777653320 00000
Q ss_pred ----------------EeEEEec-CCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCc
Q 020798 249 ----------------SSTFSVT-NGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDR 311 (321)
Q Consensus 249 ----------------~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~ 311 (321)
......+ ++++++++ ++.|.+||+.+++.+..+... ..+.+++|+|++++|++++ .++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~--~~~ 316 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGG--TFN 316 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEES--BSS
T ss_pred CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEec--CCC
Confidence 0111225 78888877 889999999999887777643 3578999999999888865 358
Q ss_pred cEEEccccc
Q 020798 312 TVKIWTQEK 320 (321)
Q Consensus 312 ~i~iw~~~~ 320 (321)
.|++||.+.
T Consensus 317 ~v~v~d~~~ 325 (349)
T 1jmx_B 317 DLAVFNPDT 325 (349)
T ss_dssp EEEEEETTT
T ss_pred eEEEEeccc
Confidence 999999863
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.4e-21 Score=163.52 Aligned_cols=249 Identities=12% Similarity=0.166 Sum_probs=165.4
Q ss_pred CCcccEEEEEECCCCCEEEEecC---CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe-CCCc
Q 020798 21 GHLRAISSVKFSHDGRLLASSSA---DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS-DDKT 96 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~---d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~-~d~~ 96 (321)
.+...+..++|+|+|+ |++++. ++.|.+|++.... ...+..+..+...+..++|+|+|++|++++ .++.
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~------~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~ 109 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT------AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGT 109 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE------EEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc------EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCE
Confidence 4556777899999999 555543 6899999884311 112333345667788999999999888887 7789
Q ss_pred EEEEecCC-cc--eeeeeec---------CcccEEEEEECCCCCEEEEeeCCCcEEEEecC-CCEEEE--EEeCC-CCCe
Q 020798 97 IRLWDVPT-AT--CLKTLIG---------HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK-TGKCLK--VLPAH-SDPV 160 (321)
Q Consensus 97 i~iwd~~~-~~--~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~-~~~~~~--~~~~~-~~~v 160 (321)
+.+|++.. +. .+..+.. ....+.+++|+|+++.+++...++.|++|++. +++... .+..+ ....
T Consensus 110 v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p 189 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGP 189 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCE
T ss_pred EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCC
Confidence 99999963 22 2222221 12347889999999966666678899999998 454322 22222 3357
Q ss_pred eEEEEccCCCEEEE-EeCCCeEEEEeCCC--Ccee--eeeccCC-----CCCeEEEEEccCCCEEEE-EecCCeEEEEeC
Q 020798 161 TAVDFNRDGTMIVT-SSYDGLCRIWDAST--GHCM--KTLIDDE-----NPPVSFVKFSPNGKFILV-GTLDNTLRLWNY 229 (321)
Q Consensus 161 ~~~~~~~~~~~l~~-~~~dg~i~~~d~~~--~~~~--~~~~~~~-----~~~~~~~~~~~~g~~l~~-~~~d~~i~i~d~ 229 (321)
..++|+|+|+++++ ...++.+.+|++.. ++.. ....... ...+..++|+|+|++|++ ...++.|.+|++
T Consensus 190 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 190 RHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 78999999996655 55788999998763 4321 1111111 134778999999998855 456899999998
Q ss_pred CCC---cEEEEEeccCCceeEEEeEEEecCCeEEEEeCC-CCeEEEEEc--ccceE
Q 020798 230 STG---KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE-DSCVYLWEL--QSRKV 279 (321)
Q Consensus 230 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~vwd~--~~~~~ 279 (321)
... +.+..+..+......+ ...++|++|++++. ++.|.+|++ .++++
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~~~---~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 270 TADGHLTLIQQISTEGDFPRDF---DLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp CGGGCEEEEEEEECSSSCCCEE---EECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCCcEEEeEEEecCCCCcCeE---EECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 732 3444554433222222 23478887777654 589999955 45554
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=6.9e-23 Score=187.66 Aligned_cols=281 Identities=12% Similarity=0.069 Sum_probs=183.1
Q ss_pred cEEEEEECCCCCEEEEecC---------CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 25 AISSVKFSHDGRLLASSSA---------DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~---------d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
.+.+++|||||++|++++. ++.+.+|++.+..... ...+ ...+..++|+|||+.|+.+. ++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~------~~~l---~~~~~~~~~SPDG~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR------GNEL---PRPIQYLCWSPVGSKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------SSCC---CSSBCCEEECSSTTCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc------ceec---CcccccceECCCCCEEEEEE-CC
Confidence 3899999999999999876 7899999986532100 0111 24578899999999999875 78
Q ss_pred cEEEEecCCcceeeee-ecCcccE-----------------EEEEECCCCCEEEEeeCCC--------------------
Q 020798 96 TIRLWDVPTATCLKTL-IGHTNYV-----------------FCVNFNPQSNMIVSGAFDE-------------------- 137 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg-------------------- 137 (321)
.|++|++.+++..... .++...+ .+++|+|||+.|++++.|.
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 9999999887654322 2222222 4799999999999887552
Q ss_pred --------------cEEEEecCCCEEE---E-----EEeCCCCCeeEEEEccCCCEEEEEeCC----CeEEEEe----CC
Q 020798 138 --------------TVRIWDVKTGKCL---K-----VLPAHSDPVTAVDFNRDGTMIVTSSYD----GLCRIWD----AS 187 (321)
Q Consensus 138 --------------~i~~wd~~~~~~~---~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~d----~~ 187 (321)
.|++||+.+++.. . .+..|...+..++|+||++++++.... ..|.+|| +.
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~ 290 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ 290 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC
Confidence 7889999877642 1 123467778999999998766664332 2488899 77
Q ss_pred CCceeeeec---cCCCCCeE-----EEEEccCCCEEEE--EecCC--eEEEEeCCCCcEEEEEeccCCceeEEEeEEEec
Q 020798 188 TGHCMKTLI---DDENPPVS-----FVKFSPNGKFILV--GTLDN--TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT 255 (321)
Q Consensus 188 ~~~~~~~~~---~~~~~~~~-----~~~~~~~g~~l~~--~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
++++..... ..+...+. .+.|+|+|+.++. +..++ .|.+||+.+++ ...+..+...... ..++ +
T Consensus 291 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~--~~~~-d 366 (719)
T 1z68_A 291 TWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAIN--IFRV-T 366 (719)
T ss_dssp SEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEE--EEEE-C
T ss_pred CCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEE--EEEE-e
Confidence 765443321 22333343 6789999996654 33444 57778887766 3344433322222 2333 3
Q ss_pred CCeEEEEeCC----CCeEEEEEccc--ce-EEEEec----CCCCCeEEEEecCCCceEEEE-eecCCccEEEcccc
Q 020798 256 NGKYIVSGSE----DSCVYLWELQS--RK-VVQKLE----GHTDPVISVASHPTENIIASG-ALDNDRTVKIWTQE 319 (321)
Q Consensus 256 ~~~~l~~~~~----dg~i~vwd~~~--~~-~~~~~~----~h~~~v~~~~~~p~~~~l~s~-~~d~~~~i~iw~~~ 319 (321)
++..++++.. ++..++|.+.. +. ....+. +|...+..+.|+|++++++.. +.+....+.+|+.+
T Consensus 367 ~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 367 QDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGR 442 (719)
T ss_dssp SSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSS
T ss_pred CCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECC
Confidence 4444445544 58888998764 32 123333 256678899999999887754 33333467888764
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=2.6e-22 Score=172.57 Aligned_cols=230 Identities=12% Similarity=0.142 Sum_probs=162.5
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc----------eee-----eeecCcccEEEEEECCCCCEEE----Eee
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT----------CLK-----TLIGHTNYVFCVNFNPQSNMIV----SGA 134 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----------~~~-----~~~~~~~~v~~~~~~~~~~~l~----~~~ 134 (321)
..++.+++++++.++++++.++ +++|+..... ... ....+...+.+++|+|++++|+ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 3578899999999999999888 8888753110 000 1123566799999999999999 788
Q ss_pred CCCcEEEEecCCC--------E---EEEEEeCCCCCeeEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCC
Q 020798 135 FDETVRIWDVKTG--------K---CLKVLPAHSDPVTAVDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP 202 (321)
Q Consensus 135 ~dg~i~~wd~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 202 (321)
.|+.|++||++++ + ....+..|...|.+++|+|+ +.+|++++.||+|++||++++....... .+...
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~-~~~~~ 194 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL-PSTVA 194 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE-CGGGC
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc-CCCCc
Confidence 9999999998654 1 23445668899999999998 7899999999999999999875543332 34567
Q ss_pred eEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC-----ceeEEEeEEEecCCeEEEE-eCCCC------eEE
Q 020798 203 VSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN-----SKYCISSTFSVTNGKYIVS-GSEDS------CVY 270 (321)
Q Consensus 203 ~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~-~~~dg------~i~ 270 (321)
+.+++|+|+|++|++|+.|+.|++||++ ++....+..+.. ........+. +++.++++ .+.+| .++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~-~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI-GTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE-ETTEEEEEEEETTCCSSSCCEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe-cCceEEEEEccCCCccCCCCceE
Confidence 9999999999999999999999999998 666666654422 1233444444 56666643 33443 389
Q ss_pred EEEcccce-----EEEEec-------CCCCCeEEEEecCCCceEEEEee
Q 020798 271 LWELQSRK-----VVQKLE-------GHTDPVISVASHPTENIIASGAL 307 (321)
Q Consensus 271 vwd~~~~~-----~~~~~~-------~h~~~v~~~~~~p~~~~l~s~~~ 307 (321)
+|++...+ ....+. +...+-..+.+-++.+++++++.
T Consensus 273 i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~ 321 (434)
T 2oit_A 273 MALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASA 321 (434)
T ss_dssp EEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEET
T ss_pred EEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecC
Confidence 99997542 122221 22233344445577777777653
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=8.7e-22 Score=164.58 Aligned_cols=241 Identities=12% Similarity=0.099 Sum_probs=174.3
Q ss_pred EEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccccc-ccEEEEEECCCCCEEE-EEeCCCcEEEEecCCc
Q 020798 28 SVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHE-QGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTA 105 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~ 105 (321)
.++++++++++++++.++.|.+||.... ..+..+..+. ..+..++|+|++++++ ++..++.|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC--------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 4578899999999999999999987542 1223333222 2577899999998665 5557889999999988
Q ss_pred ceeeeeecC------cccEEEEEECCCCCEEEEeeCC------------CcEEEEecCCCE---EEEEEeCCCCCeeEEE
Q 020798 106 TCLKTLIGH------TNYVFCVNFNPQSNMIVSGAFD------------ETVRIWDVKTGK---CLKVLPAHSDPVTAVD 164 (321)
Q Consensus 106 ~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d------------g~i~~wd~~~~~---~~~~~~~~~~~v~~~~ 164 (321)
+....+... ...+..++++|+++++++++.+ +.|.+||+.+++ .+..+.. ...+.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~ 154 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMR 154 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCccccee
Confidence 876655432 2336788999999999988865 899999998743 2233333 34678899
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCC---------------------------------------------
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE--------------------------------------------- 199 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--------------------------------------------- 199 (321)
|+|+++ +++++. .+.+||+.+++....+....
T Consensus 155 ~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 231 (349)
T 1jmx_B 155 AADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 231 (349)
T ss_dssp ECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred ECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccc
Confidence 999999 555544 49999998877654432211
Q ss_pred ----------------------CCCeEEEEEcc-CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC
Q 020798 200 ----------------------NPPVSFVKFSP-NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 200 ----------------------~~~~~~~~~~~-~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
...+..++++| +|++++++ ++.|.+||+.+++.+..+..... ... ....++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~-~~~---~~~s~d 305 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHT-YYC---VAFDKK 305 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSC-CCE---EEECSS
T ss_pred ceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCC-ccc---eEECCC
Confidence 01234567779 99998887 88999999999988877764332 222 233467
Q ss_pred CeEEEEeCCCCeEEEEEcccceEEEEecCC
Q 020798 257 GKYIVSGSEDSCVYLWELQSRKVVQKLEGH 286 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h 286 (321)
+++|++++.++.|++||+.+++.+..+..+
T Consensus 306 g~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 306 GDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 888888888999999999999888776544
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=1e-21 Score=165.57 Aligned_cols=244 Identities=12% Similarity=0.133 Sum_probs=166.3
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecC-Ccceeeeee--cCcccEEEEEECCCCCE--EEEee-------------C
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVP-TATCLKTLI--GHTNYVFCVNFNPQSNM--IVSGA-------------F 135 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~--~~~~~v~~~~~~~~~~~--l~~~~-------------~ 135 (321)
..+..++|+|+|++|++++.+ .|.+|++. +++...... .+ +....++++|++++ +++++ .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 357789999999999988887 99999987 665433221 11 22445789999984 45553 6
Q ss_pred CCcEEEEecC-CCEEEEEEe----CCCCCeeEEEEccCCCEEEEEe-CCCeEEEEeCC-CCceee--eeccC-CCCCeEE
Q 020798 136 DETVRIWDVK-TGKCLKVLP----AHSDPVTAVDFNRDGTMIVTSS-YDGLCRIWDAS-TGHCMK--TLIDD-ENPPVSF 205 (321)
Q Consensus 136 dg~i~~wd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~-~~~~~~--~~~~~-~~~~~~~ 205 (321)
++.+.+|++. +++....+. .+...+..++|+|+|+.++++. .++.|++||+. +++... .+... +...+..
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 8999999997 455443333 2456789999999999887765 46799999998 665422 22111 2445788
Q ss_pred EEEccCCCEEEEEec-CCeEEEEeCC--CCcEEE---EEeccC----Ccee------EEEeEE-EecCCeEEEEeCCC-C
Q 020798 206 VKFSPNGKFILVGTL-DNTLRLWNYS--TGKILK---TYTGHT----NSKY------CISSTF-SVTNGKYIVSGSED-S 267 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~-d~~i~i~d~~--~~~~~~---~~~~~~----~~~~------~~~~~~-~~~~~~~l~~~~~d-g 267 (321)
++|+|+|++++++.. ++.|.+|++. +++... .+.... .... ...... ..+||++|++++.+ .
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 999999999888775 6899999765 455432 222111 1010 122233 56889888766532 2
Q ss_pred -----eEEEEEcc-cceEEE---EecCCCCCeEEEEecC---CCceEEEEeecCCccEEEccccc
Q 020798 268 -----CVYLWELQ-SRKVVQ---KLEGHTDPVISVASHP---TENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 268 -----~i~vwd~~-~~~~~~---~~~~h~~~v~~~~~~p---~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.|++|++. ++++.. ....+......++|+| ++++|++++.+ ++.|++|+.+.
T Consensus 278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~-~~~v~v~~~~~ 341 (365)
T 1jof_A 278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ-EGWLEIYRWKD 341 (365)
T ss_dssp TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS-SCEEEEEEEET
T ss_pred CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC-CCeEEEEEEch
Confidence 89999996 555433 2334555678899999 89999998754 47899998764
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=9.3e-21 Score=159.39 Aligned_cols=265 Identities=13% Similarity=0.183 Sum_probs=173.2
Q ss_pred CcccEEEEEECCCCCEEEEecCC----ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe-CCCc
Q 020798 22 HLRAISSVKFSHDGRLLASSSAD----KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS-DDKT 96 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d----~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~-~d~~ 96 (321)
|...+..++|+|+|++|++++.+ +.+.+|++.... .....+.....+......+++ ++++|++++ .++.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~----g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~ 121 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK----GTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGS 121 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT----TEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC----CcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCE
Confidence 56677889999999999998875 799999875310 111122233334556777888 788777665 6789
Q ss_pred EEEEecCCcceeeee------ec--------CcccEEEEEECCCCCEEEEee-CCCcEEEEecCCCE-------E-----
Q 020798 97 IRLWDVPTATCLKTL------IG--------HTNYVFCVNFNPQSNMIVSGA-FDETVRIWDVKTGK-------C----- 149 (321)
Q Consensus 97 i~iwd~~~~~~~~~~------~~--------~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~-------~----- 149 (321)
+.+|++.....+..+ .+ +...+.+++|+|+++++++++ .++.|++|++.... .
T Consensus 122 v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 122 ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 999999754322211 11 123457899999999765554 57899999886433 1
Q ss_pred -EEEEeCCCCCeeEEEEccCCCEEEEEe-CCCeEEEEeCCCCcee--eeec--cCCCCCeEEEEEccCCCEEEEEecC--
Q 020798 150 -LKVLPAHSDPVTAVDFNRDGTMIVTSS-YDGLCRIWDASTGHCM--KTLI--DDENPPVSFVKFSPNGKFILVGTLD-- 221 (321)
Q Consensus 150 -~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~--~~~~--~~~~~~~~~~~~~~~g~~l~~~~~d-- 221 (321)
......+......++|+|+++++++++ .++.|.+||+.++... ..+. .........++|+|+|++|+++..+
T Consensus 202 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 202 PEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred ccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 111223345678999999999887776 6899999999866432 2221 1122345789999999998776654
Q ss_pred CeEEEEeCC--CCc--EEEEEeccCCceeEEEeEEEecCCeEEEEeC-CCCeEEEEEc--ccceEEEEec-CCCCCeEEE
Q 020798 222 NTLRLWNYS--TGK--ILKTYTGHTNSKYCISSTFSVTNGKYIVSGS-EDSCVYLWEL--QSRKVVQKLE-GHTDPVISV 293 (321)
Q Consensus 222 ~~i~i~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~vwd~--~~~~~~~~~~-~h~~~v~~~ 293 (321)
+.|.+|++. +++ .+..+.. ...... ....++|++|++++ .++.|.+|++ .++++..... .+...+.|+
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~---~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v 357 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLT-GIHPRN---FIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCL 357 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEEC-SSCCCE---EEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEE
T ss_pred CEEEEEEEcCCCCcEEEeeEecC-CCCCce---EEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEE
Confidence 899999985 444 3444433 112222 23347898777776 6789999755 4565543321 234567888
Q ss_pred Eec
Q 020798 294 ASH 296 (321)
Q Consensus 294 ~~~ 296 (321)
.|.
T Consensus 358 ~~~ 360 (361)
T 3scy_A 358 KFV 360 (361)
T ss_dssp EEE
T ss_pred EEc
Confidence 875
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=1.7e-22 Score=185.17 Aligned_cols=277 Identities=12% Similarity=0.149 Sum_probs=184.4
Q ss_pred EEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccc---cEEEEEECCCCCEEEEEeC---------CC
Q 020798 28 SVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQ---GVSDLVFSSDSRFLVSASD---------DK 95 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~---~i~~~~~~~~~~~l~~~~~---------d~ 95 (321)
.++|+|+|++++++ .|+.+++|+.... .....+..|.. .+.+++|||||++|++++. ++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~ 90 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETG--------QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTA 90 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSC--------CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCC--------cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecce
Confidence 67999999766655 5999999987542 12223333332 3889999999999998876 78
Q ss_pred cEEEEecCCccee--eeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE-eCCCCCe------------
Q 020798 96 TIRLWDVPTATCL--KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL-PAHSDPV------------ 160 (321)
Q Consensus 96 ~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~~~v------------ 160 (321)
.|++||+.+++.+ ..+ ...+..++|+|||+.|+.+. ++.|++||+.+++..... ..+...+
T Consensus 91 ~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee 166 (719)
T 1z68_A 91 TYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEE 166 (719)
T ss_dssp EEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHH
T ss_pred EEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeee
Confidence 9999999988752 222 24577899999999999875 789999999887654432 1222212
Q ss_pred -----eEEEEccCCCEEEEEeCCC----------------------------------eEEEEeCCCCcee--eee----
Q 020798 161 -----TAVDFNRDGTMIVTSSYDG----------------------------------LCRIWDASTGHCM--KTL---- 195 (321)
Q Consensus 161 -----~~~~~~~~~~~l~~~~~dg----------------------------------~i~~~d~~~~~~~--~~~---- 195 (321)
.+++|+|||+.|++++.|. .+++||+.+++.. ..+
T Consensus 167 ~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 246 (719)
T 1z68_A 167 MLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA 246 (719)
T ss_dssp TTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH
T ss_pred cccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc
Confidence 4899999999999887542 7889999887642 111
Q ss_pred -ccCCCCCeEEEEEccCCCEEEEEecC----CeEEEEe----CCCCcEEEEE----eccCCceeE--EEeEEEecCCeEE
Q 020798 196 -IDDENPPVSFVKFSPNGKFILVGTLD----NTLRLWN----YSTGKILKTY----TGHTNSKYC--ISSTFSVTNGKYI 260 (321)
Q Consensus 196 -~~~~~~~~~~~~~~~~g~~l~~~~~d----~~i~i~d----~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~l 260 (321)
...+...+..++|+||++++++.... ..|.+|| +.+++....+ ..+...... .....+.+||+.+
T Consensus 247 ~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 326 (719)
T 1z68_A 247 MIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISY 326 (719)
T ss_dssp HHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCE
T ss_pred cCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeE
Confidence 11244457889999998877664432 2488899 7776543332 233322210 0012234678754
Q ss_pred E--EeCCCC--eEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeec---CCccEEEcccc
Q 020798 261 V--SGSEDS--CVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALD---NDRTVKIWTQE 319 (321)
Q Consensus 261 ~--~~~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d---~~~~i~iw~~~ 319 (321)
+ +...+| .|.+||+.+++ ...+..+...+..+.+. +++.|+..+.+ .++.++||..+
T Consensus 327 ~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 327 YKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 4 344555 56777776665 44566666678888777 77776666532 24778888764
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.89 E-value=8.5e-22 Score=167.58 Aligned_cols=275 Identities=12% Similarity=0.083 Sum_probs=179.6
Q ss_pred EEEEEECCCCCEEEEecCC---ceEEEeeccccCCCCCCCCCccccccccccc-EEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 26 ISSVKFSHDGRLLASSSAD---KTLLTYSLSSISNSDSTPPSPLQKFTGHEQG-VSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d---~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
+..++|||||++|+..... ..+.+|++.... ...+..+... ...+.|+|+|++|+.++.++.|.+||
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~---------~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d 108 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ---------AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVD 108 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE---------EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc---------EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEE
Confidence 6778999999998776443 356667654321 1122222222 23378999999999999999999999
Q ss_pred cCCcceeeeeecCcccEEE-------------------EEECCCCCEEEEe-----eCCCcEEEEecCCCEEEEEEeCCC
Q 020798 102 VPTATCLKTLIGHTNYVFC-------------------VNFNPQSNMIVSG-----AFDETVRIWDVKTGKCLKVLPAHS 157 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~~wd~~~~~~~~~~~~~~ 157 (321)
+.+++.......+...... +.++|+++.++.+ ..+..|++||+.+++..... .+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~ 187 (396)
T 3c5m_A 109 LETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDT 187 (396)
T ss_dssp TTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EES
T ss_pred CCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCC
Confidence 9887654443333332222 3467777766544 45678999999888755444 456
Q ss_pred CCeeEEEEcc-CCCEEEEEeCC------CeEEEEeCCCCceeeeeccCC-CCCeEEEEEccCCCEEEEEecC-----CeE
Q 020798 158 DPVTAVDFNR-DGTMIVTSSYD------GLCRIWDASTGHCMKTLIDDE-NPPVSFVKFSPNGKFILVGTLD-----NTL 224 (321)
Q Consensus 158 ~~v~~~~~~~-~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~d-----~~i 224 (321)
..+..+.|+| ++..++..+.+ ..|.+||+..+.. ..+.... ...+..+.|+|+|++|+.++.+ +.|
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 6788999999 78777666543 3688888876542 2222211 2246678999999987776543 449
Q ss_pred EEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeC----------------CCCeEEEEEcccceEEEEecCCCC
Q 020798 225 RLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS----------------EDSCVYLWELQSRKVVQKLEGHTD 288 (321)
Q Consensus 225 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------------~dg~i~vwd~~~~~~~~~~~~h~~ 288 (321)
.+||+.+++........ . . ...+.+++|++++.++ .++.|++||+.+++. ..+..+..
T Consensus 267 ~~~d~~~g~~~~l~~~~-~-~---~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~ 340 (396)
T 3c5m_A 267 YKANPETLENEEVMVMP-P-C---SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHST 340 (396)
T ss_dssp EEECTTTCCEEEEEECC-S-E---EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCC
T ss_pred EEEECCCCCeEEeeeCC-C-C---CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCC
Confidence 99999888654433211 1 1 1334432888877653 347899999987764 33444443
Q ss_pred -----------CeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 289 -----------PVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 289 -----------~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
.+..++|+|+++.|+.++.+ ++...||.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~-~~~~~l~~~ 380 (396)
T 3c5m_A 341 SWDVLDGDRQITHPHPSFTPNDDGVLFTSDF-EGVPAIYIA 380 (396)
T ss_dssp CCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEE
T ss_pred ccccccccccCCCCCceEccCCCeEEEEecC-CCCceEEEE
Confidence 25678999999999888754 456666654
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=8.7e-22 Score=176.10 Aligned_cols=231 Identities=14% Similarity=0.065 Sum_probs=166.6
Q ss_pred cccEEEEEECCCCCEEEEEeC-CCcEEEEecCCcceeeeeecCc-ccEEEEEECCCCCEEEEeeC---CCcEEEEecCC-
Q 020798 73 EQGVSDLVFSSDSRFLVSASD-DKTIRLWDVPTATCLKTLIGHT-NYVFCVNFNPQSNMIVSGAF---DETVRIWDVKT- 146 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~~wd~~~- 146 (321)
...|.+++|+|||+.|++++. ||+++||++.+++. ..+..+. ..+..++|+|+ +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999998877 99999999966654 4454555 57899999999 67776664 45556654432
Q ss_pred --CEEEEEEeCCCCCeeEEEEccCCCE-EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC--
Q 020798 147 --GKCLKVLPAHSDPVTAVDFNRDGTM-IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD-- 221 (321)
Q Consensus 147 --~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d-- 221 (321)
+... .+.. .......+|+|+++. +++.+.++.+.+||+.+++..... .... ..++|+|||++|+.++.+
T Consensus 99 ~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~-~~~~---~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 99 RPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA-RLPG---FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp STTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-EESS---CEEEEEEETTEEEEEEEEET
T ss_pred CCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-cCCC---ceEEECCCCCEEEEEEEcCC
Confidence 2222 2322 223456788888863 334444445559999887654332 2211 678999999999987766
Q ss_pred --CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC--eEEEEEcccceEEEEecCCCCCeEEEE---
Q 020798 222 --NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS--CVYLWELQSRKVVQKLEGHTDPVISVA--- 294 (321)
Q Consensus 222 --~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~--- 294 (321)
..|++||+.+++.. .+..+.... ....+.|||+.|+++..++ .|++||+.+++.. .+.+|...+.+++
T Consensus 173 ~~~~i~~~d~~~g~~~-~l~~~~~~~---~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VFDSGEGSF---SSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp TEEEEEEEETTTCCCE-EECCSSCEE---EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred CCeEEEEEcCCCCCce-EeecCCCcc---ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 78999999888754 455554433 3334458999999888888 8999999988877 7778887888888
Q ss_pred -----ecCCCceEEEEeecCCccEEEccc
Q 020798 295 -----SHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 295 -----~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
|+|||.++++++. ++.++||+.
T Consensus 248 ~~~~~~spdg~~~~~~~~--~g~~~l~~~ 274 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARR--EGRSAVFID 274 (582)
T ss_dssp EEEEEECTTSCEEEEEEE--TTEEEEEET
T ss_pred ccceeEcCCCcEEEEEEc--CCcEEEEEE
Confidence 9999987888774 478999986
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=5.4e-21 Score=173.56 Aligned_cols=290 Identities=12% Similarity=0.044 Sum_probs=191.0
Q ss_pred eeccCCcccEEEEEECCCCCEEEEe--cCCceEEEeeccccCCCCCCCCCcccccccccccEE---------EEEEC--C
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLASS--SADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVS---------DLVFS--S 83 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~~~--~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~---------~~~~~--~ 83 (321)
+.+.+|...+..++|++++-+++.. +.++...+|..... .....+..|...+. ...|+ |
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP 88 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD--------GAEESALPAPWNVRNRVFEYSGFPWAGVPRP 88 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT--------SCEEESSCTTCCBCCCGGGTCCCCEEEECCS
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC--------CCcceeCCCCccccccccccCCccceeeeec
Confidence 3467899999999999887777777 66888889975210 11233444444444 45454 9
Q ss_pred CCCE-EEEEeC-CCcEEEEecC--C-cceeeeeec-----CcccEEEEEECCCCCEEEEeeCC----------CcEEEEe
Q 020798 84 DSRF-LVSASD-DKTIRLWDVP--T-ATCLKTLIG-----HTNYVFCVNFNPQSNMIVSGAFD----------ETVRIWD 143 (321)
Q Consensus 84 ~~~~-l~~~~~-d~~i~iwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~~wd 143 (321)
||+. |+.++. +..|.++++. . +. ...+.. |...+..++|+|||+.|++++.+ ..|++||
T Consensus 89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 89 AGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred CCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 9998 776554 5567777765 2 33 344444 66778899999999999988876 5899999
Q ss_pred cCC------CEEEEEEe-CCCCCeeEEEEccCCCEEEEEeCC--------CeEEEEeCC-CCc--eeeeeccCCCCCeEE
Q 020798 144 VKT------GKCLKVLP-AHSDPVTAVDFNRDGTMIVTSSYD--------GLCRIWDAS-TGH--CMKTLIDDENPPVSF 205 (321)
Q Consensus 144 ~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~~d~~-~~~--~~~~~~~~~~~~~~~ 205 (321)
+.+ ++. ..+. .+...+..++|+|||+.|+.++.+ ..|++||+. ++. ....+...+...+..
T Consensus 168 ~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~ 246 (662)
T 3azo_A 168 LDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ 246 (662)
T ss_dssp TTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE
T ss_pred CCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc
Confidence 987 543 3444 455677889999999999877754 379999998 461 333443333456788
Q ss_pred EEEccCCCEEEEEecCC--eEEEEeCCCCcEEEEEeccCCc---eeE--EEeEEEecCCeEEEEeCCCCeEEEE--Eccc
Q 020798 206 VKFSPNGKFILVGTLDN--TLRLWNYSTGKILKTYTGHTNS---KYC--ISSTFSVTNGKYIVSGSEDSCVYLW--ELQS 276 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~l~~~~~dg~i~vw--d~~~ 276 (321)
+.|+|+|++++++..++ .|.+||+.+++.......+... .+. +......++++++++++. +.++|| |+.+
T Consensus 247 ~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp EEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred eEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 99999999777777777 6777777666654433222111 000 111222367888999888 999999 5444
Q ss_pred ceEEEEecCCCCCeEEE-EecCCCceEEEEeecCCccEEEccc
Q 020798 277 RKVVQKLEGHTDPVISV-ASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 277 ~~~~~~~~~h~~~v~~~-~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
++ +..+..|...+..+ +++++...+++++.+....|.+|+.
T Consensus 326 ~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 326 GE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDT 367 (662)
T ss_dssp TE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEET
T ss_pred Cc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEEC
Confidence 44 67788887778877 5554444455544332234444443
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.88 E-value=1.1e-18 Score=144.84 Aligned_cols=242 Identities=14% Similarity=0.196 Sum_probs=176.0
Q ss_pred cccEEEEEECCCCCEEEEEeCC------------------------CcEEEEecCCcceeeeee-cCcccEEEEEECCCC
Q 020798 73 EQGVSDLVFSSDSRFLVSASDD------------------------KTIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQS 127 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d------------------------~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 127 (321)
-+.+.+++++|+|+++++...+ +.|.+||..+++...... ++......++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3678999999999988888777 479999998888765443 344568899999999
Q ss_pred CEEEEeeCCCcEEEEecCCCE-EEEEE---------eCCCCCeeEEEEcc-CCCEEEEEe-CCCeEEEEeCCCCceeeee
Q 020798 128 NMIVSGAFDETVRIWDVKTGK-CLKVL---------PAHSDPVTAVDFNR-DGTMIVTSS-YDGLCRIWDASTGHCMKTL 195 (321)
Q Consensus 128 ~~l~~~~~dg~i~~wd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~~~d~~~~~~~~~~ 195 (321)
+.+++...++.|++||..... .+..+ ..+......++++| ++.++++.+ .++.|++||. .+.....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEe
Confidence 988888888999999976442 33333 22334678999999 788888776 6899999994 45544443
Q ss_pred ccCC---------CCCeEEEEEccC-CCEEEEEecCCeEEEEeCCCCcEEEEEecc--CCceeEEEeEEEec------CC
Q 020798 196 IDDE---------NPPVSFVKFSPN-GKFILVGTLDNTLRLWNYSTGKILKTYTGH--TNSKYCISSTFSVT------NG 257 (321)
Q Consensus 196 ~~~~---------~~~~~~~~~~~~-g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~------~~ 257 (321)
.... -.....++++|+ +.++++...++.|++||..+++.+..+... ......+ .+ .+ ++
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~--~~-~pg~~~~~~g 258 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI--SY-IPGFLFAVNG 258 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE--EE-ETTEEEEEEC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee--ee-cCCEEEEeCC
Confidence 2111 123678999998 776677677889999999889888887532 2222222 22 23 23
Q ss_pred eEEEEeCCCCeEEEEEcccceEEEEe---cCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 258 KYIVSGSEDSCVYLWELQSRKVVQKL---EGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 258 ~~l~~~~~dg~i~vwd~~~~~~~~~~---~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..+++...+..|++|+..+++.+..+ .++.....+++++|+|.++++.. .+++|++|+.+.
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~--~~~~I~~~~~~~ 322 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA--HTNTVWKFTLTE 322 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES--SSCCEEEEEEEE
T ss_pred CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC--CCCEEEEEeCCc
Confidence 33333345568999999999988877 35667789999999998888765 457899999753
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=6.2e-20 Score=154.62 Aligned_cols=245 Identities=11% Similarity=0.094 Sum_probs=162.4
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeecc-ccCCCCCCCCCcccccccccccEEEEEECCCCCE--EEEEe------
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLS-SISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRF--LVSAS------ 92 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~--l~~~~------ 92 (321)
+...+..++|+|+|++|++++.+ .+.+|++. ... ...+.....+ +.+..++|+|+|++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~------~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~ 109 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTE------IVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAV 109 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTE------EEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCC------EEEeeEeecC-CCCccEEECCCCCEEEEEEecCCccee
Confidence 34467889999999999988887 89999875 210 0001111111 22456889999994 44543
Q ss_pred -------CCCcEEEEecC-Ccceeeeee----cCcccEEEEEECCCCCEEEEee-CCCcEEEEecC-CCEEE--EEEe--
Q 020798 93 -------DDKTIRLWDVP-TATCLKTLI----GHTNYVFCVNFNPQSNMIVSGA-FDETVRIWDVK-TGKCL--KVLP-- 154 (321)
Q Consensus 93 -------~d~~i~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~-~~~~~--~~~~-- 154 (321)
.++.+.+|++. .++....+. .+...+.+++|+|+|++++++. .++.|++||+. +++.. ..+.
T Consensus 110 ~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 110 YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred ccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence 68899999997 455433332 2456788999999999887765 46799999998 66543 2333
Q ss_pred CCCCCeeEEEEccCCCEEEEEeC-CCeEEEEeCC--CCceee---eec--cCC--C-C-------CeEEEE-EccCCCEE
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSSY-DGLCRIWDAS--TGHCMK---TLI--DDE--N-P-------PVSFVK-FSPNGKFI 215 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~d~~--~~~~~~---~~~--~~~--~-~-------~~~~~~-~~~~g~~l 215 (321)
.+...+..++|+|+|+.+++++. ++.+.+|+.. +++... .+. ... . . .+..++ |+|+|++|
T Consensus 190 ~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 190 DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 23566889999999998887765 7899999764 454321 111 111 0 1 367899 99999998
Q ss_pred EEEecC-C-----eEEEEeCC-CCcEEEE---EeccCCceeEEEeEEEec---CCeEEEEeCCC-CeEEEEEcccc
Q 020798 216 LVGTLD-N-----TLRLWNYS-TGKILKT---YTGHTNSKYCISSTFSVT---NGKYIVSGSED-SCVYLWELQSR 277 (321)
Q Consensus 216 ~~~~~d-~-----~i~i~d~~-~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d-g~i~vwd~~~~ 277 (321)
+++..+ + .|.+|++. ++++... ...+......+ .+. | +|++|++++.+ +.|++|++...
T Consensus 270 ~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~--a~s-p~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 270 FASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSN--AVS-PCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCC--CEE-ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccc--eec-CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 876643 3 89999986 5665431 22222111111 222 5 78888888764 89999998765
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=5e-18 Score=137.97 Aligned_cols=241 Identities=14% Similarity=0.247 Sum_probs=171.5
Q ss_pred cccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeee------cCcccEEEEEE-CCCCCEEEEeeC-CCcEEEE
Q 020798 71 GHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLI------GHTNYVFCVNF-NPQSNMIVSGAF-DETVRIW 142 (321)
Q Consensus 71 ~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~v~~~~~-~~~~~~l~~~~~-dg~i~~w 142 (321)
++-..+.+++++++++++++...++.|.+||.. ++....+. ++...+..+++ .++++.+++... ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 344668899999999988888889999999987 44444442 23456789999 566666666533 7899999
Q ss_pred ecCCCEEEEEEeC-CCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc-CCCCCeEEEEEccCCCEEEEEec
Q 020798 143 DVKTGKCLKVLPA-HSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVGTL 220 (321)
Q Consensus 143 d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~ 220 (321)
| .+++....+.. +...+..+++.|+++++++...++.|.+||.. ++....+.. .....+..++++++|+++++...
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 9 55666655543 33568899999999988877788999999965 344443322 22345788999999997777777
Q ss_pred CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC-eEEEEEcccceEEEEecCCC--CCeEEEEecC
Q 020798 221 DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS-CVYLWELQSRKVVQKLEGHT--DPVISVASHP 297 (321)
Q Consensus 221 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~p 297 (321)
++.|++||. +++.+..+........ .......++|.++++...++ .|++||. .++.+..+..+. ..+.+++++|
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~g~~~~-p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGEGITNY-PIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCTTTSCS-EEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET
T ss_pred CCEEEEEcC-CCCEEEEEccCCccCC-CcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC
Confidence 899999997 4566666644321111 22233446788888887776 9999995 456666665443 3478999999
Q ss_pred CCceEEEEeecCCccEEEccccc
Q 020798 298 TENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 298 ~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+++++++ + .++.|++|+...
T Consensus 261 ~g~l~vs-~--~~~~v~v~~~~~ 280 (286)
T 1q7f_A 261 DGSVVLA-S--KDYRLYIYRYVQ 280 (286)
T ss_dssp TTEEEEE-E--TTTEEEEEECSC
T ss_pred CCcEEEE-C--CCCeEEEEEccc
Confidence 9998887 3 357999998753
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=7.2e-18 Score=137.05 Aligned_cols=248 Identities=11% Similarity=0.216 Sum_probs=172.7
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEE-CCCCCEEEEEeC-CCcE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVF-SSDSRFLVSASD-DKTI 97 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~-~~~~~~l~~~~~-d~~i 97 (321)
.+|...+.+++++|+|+++++...++.|.+|+........... .....+|...+..+++ .++++++++... ++.|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~---~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGE---CGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECC---BSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecc---cCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 3567789999999999988888889999999764211000000 0001234456889999 577776666543 7899
Q ss_pred EEEecCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe--CCCCCeeEEEEccCCCEEEE
Q 020798 98 RLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDFNRDGTMIVT 174 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~ 174 (321)
.+|| .+++.+..+. .+...+..++++|+++.+++...++.|++||.. ++....+. .+...+..++++|+++++++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 9999 5555555443 234568899999999988887788999999964 45455553 33456889999999988777
Q ss_pred EeCCCeEEEEeCCCCceeeeeccC-CCCCeEEEEEccCCCEEEEEecCC-eEEEEeCCCCcEEEEEeccCCceeEEEeEE
Q 020798 175 SSYDGLCRIWDASTGHCMKTLIDD-ENPPVSFVKFSPNGKFILVGTLDN-TLRLWNYSTGKILKTYTGHTNSKYCISSTF 252 (321)
Q Consensus 175 ~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 252 (321)
...++.|++||... +.+..+... ....+..++++++|+++++...++ .|.+||. +++.+..+..+........ ..
T Consensus 181 ~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~-i~ 257 (286)
T 1q7f_A 181 DNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFD-VA 257 (286)
T ss_dssp EGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEE-EE
T ss_pred ECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCccee-EE
Confidence 77899999999754 444444322 124578899999999888777775 9999995 5667777655433222222 23
Q ss_pred EecCCeEEEEeCCCCeEEEEEccc
Q 020798 253 SVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
..++|+++++ +.++.|++|++..
T Consensus 258 ~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 258 LMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EETTTEEEEE-ETTTEEEEEECSC
T ss_pred ECCCCcEEEE-CCCCeEEEEEccc
Confidence 3468887777 5689999999754
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=1.3e-18 Score=146.19 Aligned_cols=267 Identities=13% Similarity=0.147 Sum_probs=183.9
Q ss_pred eeeeccCCcccEEEEEECCCCCEEEEec----------CCceEEEeeccccCCCCCCCCCccccccc------ccccEEE
Q 020798 15 LTQTLNGHLRAISSVKFSHDGRLLASSS----------ADKTLLTYSLSSISNSDSTPPSPLQKFTG------HEQGVSD 78 (321)
Q Consensus 15 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~------h~~~i~~ 78 (321)
+...+..+..+ .++|+|||++|+++. .++.|.+||..... .+..+.. +......
T Consensus 43 ~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--------~~~~i~~~~~~~~~g~~p~~ 112 (361)
T 2oiz_A 43 FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--------FEKEISLPPKRVQGLNYDGL 112 (361)
T ss_dssp EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--------EEEEEEECTTBCCBCCCGGG
T ss_pred EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--------EEEEEEcCccccccCCCcce
Confidence 34455555555 899999999999876 36779999875321 2222221 2234667
Q ss_pred EEECCCCCEEEEEeC--CCcEEEEecCCcceeee-eecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCC-CEEEEE-
Q 020798 79 LVFSSDSRFLVSASD--DKTIRLWDVPTATCLKT-LIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKT-GKCLKV- 152 (321)
Q Consensus 79 ~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~-~~~~~~- 152 (321)
++++|+|++|+++.. +++|.+||+.+++.+.. +.. .. ...+.+.|++ ..+++.+.||.+.+|+... ++....
T Consensus 113 i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~ 190 (361)
T 2oiz_A 113 FRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQS 190 (361)
T ss_dssp EEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEE
T ss_pred EEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeec
Confidence 999999999998763 57899999999987766 432 22 2335567765 5678888999999999865 443311
Q ss_pred -----EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce--eeeeccC------C---CCCeEEEEEccCCCEEE
Q 020798 153 -----LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC--MKTLIDD------E---NPPVSFVKFSPNGKFIL 216 (321)
Q Consensus 153 -----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~------~---~~~~~~~~~~~~g~~l~ 216 (321)
+.....++ .+.+.+++..++..+.++.+.++|+..... ...+... . ......++++|+++.++
T Consensus 191 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ly 269 (361)
T 2oiz_A 191 RSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMY 269 (361)
T ss_dssp ECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEE
T ss_pred cccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEE
Confidence 12222222 233467777777788899999999865431 1111000 0 01112368999988887
Q ss_pred EEec-----------CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccc--eEEEEe
Q 020798 217 VGTL-----------DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSR--KVVQKL 283 (321)
Q Consensus 217 ~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~ 283 (321)
++.. .+.|.+||+.+++.+..+..+. ...+ ...++|++|++++. +.|.+||..++ +.+..+
T Consensus 270 v~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~i---a~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 270 VFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSM---TIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp EEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEE---EEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred EEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEE---EECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 7654 3489999999999999988765 3333 23478889988887 99999999999 999888
Q ss_pred cCCCCCeEEEEecCCCc
Q 020798 284 EGHTDPVISVASHPTEN 300 (321)
Q Consensus 284 ~~h~~~v~~~~~~p~~~ 300 (321)
..+...-..++++|+|+
T Consensus 344 ~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 344 EGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTSCSSEEEEEECCCSC
T ss_pred ccCCCCcEEEEecCCCC
Confidence 76777779999999986
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=7.1e-20 Score=168.11 Aligned_cols=239 Identities=12% Similarity=0.093 Sum_probs=163.5
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCccc-----EEEEEECCCCCEEEEeeCC---------CcEEE
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNY-----VFCVNFNPQSNMIVSGAFD---------ETVRI 141 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------g~i~~ 141 (321)
..++.|+|++++++++ |+.|++||+.++++...+.+|... .....|+|||++|+.++.+ +.+.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 4578999999988886 899999999999876666666532 2347889999999988775 56779
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCe-----------------E
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPV-----------------S 204 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~-----------------~ 204 (321)
||+.+++... +..+...+...+|+|||+.|+.+. ++.|++||+.++...+.........+ .
T Consensus 97 ~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 97 YDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 9999987543 556677899999999999998874 68999999987764432221111111 2
Q ss_pred EEEEccCCCEEEEEecCC------------------------------------eEEEEeCCC---Cc--EEEEEecc--
Q 020798 205 FVKFSPNGKFILVGTLDN------------------------------------TLRLWNYST---GK--ILKTYTGH-- 241 (321)
Q Consensus 205 ~~~~~~~g~~l~~~~~d~------------------------------------~i~i~d~~~---~~--~~~~~~~~-- 241 (321)
.+.|+|||+.|+.+..|. .|++||+.+ ++ ....+...
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 478999999998875321 478888887 62 22233220
Q ss_pred --CCceeEEEeEEEecCCeEEEEe----CCCCeEEEEEcccce----EE--EEe--cCCCCCeE-----EEEecCCCceE
Q 020798 242 --TNSKYCISSTFSVTNGKYIVSG----SEDSCVYLWELQSRK----VV--QKL--EGHTDPVI-----SVASHPTENII 302 (321)
Q Consensus 242 --~~~~~~~~~~~~~~~~~~l~~~----~~dg~i~vwd~~~~~----~~--~~~--~~h~~~v~-----~~~~~p~~~~l 302 (321)
....+ +....+.+||+.++.. ..+..|++||+.+++ +. ..+ .+|...|. +.+|+|||+.|
T Consensus 255 ~~~~~~~-~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 255 MLIGDHY-LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHTSCEE-EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred CCCCCeE-EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 01122 3333334788866543 234479999998876 21 122 44655554 78999999988
Q ss_pred E-EEee-cCCccEEEcccc
Q 020798 303 A-SGAL-DNDRTVKIWTQE 319 (321)
Q Consensus 303 ~-s~~~-d~~~~i~iw~~~ 319 (321)
+ ..+. ++...|.+|+.+
T Consensus 334 ~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQID 352 (740)
T ss_dssp EEEEECTTSCEEEEEEETT
T ss_pred EEEEEcCCCceEEEEEECC
Confidence 7 6653 233467777764
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=1.5e-19 Score=165.87 Aligned_cols=280 Identities=10% Similarity=0.125 Sum_probs=177.6
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccc-----cEEEEEECCCCCEEEEEeCC-----
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQ-----GVSDLVFSSDSRFLVSASDD----- 94 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~i~~~~~~~~~~~l~~~~~d----- 94 (321)
....++|+|||++++++ |+.|++|++.... ....+.+|.. ....+.|||||++|+.++.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--------SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR 87 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCC--------EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCc--------eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE
Confidence 35578999999999886 8999999876432 1222333332 23458899999999988876
Q ss_pred ----CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE-eCCCCCe---------
Q 020798 95 ----KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL-PAHSDPV--------- 160 (321)
Q Consensus 95 ----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~~~v--------- 160 (321)
+.+.+||+.+++.. .+..+...+...+|+|||+.|+.+. ++.|++|++.+++..+.. ..+...+
T Consensus 88 ~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp SCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHH
T ss_pred EccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccc
Confidence 56779999998753 4666777899999999999998874 689999999887644321 1222112
Q ss_pred --------eEEEEccCCCEEEEEeCCC------------------------------------eEEEEeCCC---Cc--e
Q 020798 161 --------TAVDFNRDGTMIVTSSYDG------------------------------------LCRIWDAST---GH--C 191 (321)
Q Consensus 161 --------~~~~~~~~~~~l~~~~~dg------------------------------------~i~~~d~~~---~~--~ 191 (321)
..+.|+|||+.|+..+.|. .+++||+.+ ++ .
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce
Confidence 3589999999988775221 578899887 63 1
Q ss_pred eeeecc-----CCCCCeEEEEEccCCCEEEEEec----CCeEEEEeCCCCc----E--EEEE--eccCCceeE--EEeEE
Q 020798 192 MKTLID-----DENPPVSFVKFSPNGKFILVGTL----DNTLRLWNYSTGK----I--LKTY--TGHTNSKYC--ISSTF 252 (321)
Q Consensus 192 ~~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~----d~~i~i~d~~~~~----~--~~~~--~~~~~~~~~--~~~~~ 252 (321)
...+.. .+...+..++|+|||+.++.... +..|.+||+.+++ . +..+ ..+...... .....
T Consensus 246 ~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 246 SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH 325 (740)
T ss_dssp EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCE
T ss_pred EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCce
Confidence 222221 14445788999999997665533 2379999998876 1 1111 222211110 00122
Q ss_pred EecCCeEEE-EeC-CC--CeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEE-EEee--cCCccEEEccc
Q 020798 253 SVTNGKYIV-SGS-ED--SCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA-SGAL--DNDRTVKIWTQ 318 (321)
Q Consensus 253 ~~~~~~~l~-~~~-~d--g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~~~--d~~~~i~iw~~ 318 (321)
+.+||+.++ ..+ .+ ..|++||+..++.. .+......|..+.. ++++.|+ ++.. ++.+...||.+
T Consensus 326 fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 326 FTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred EcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 347888766 444 33 46888898766543 44444455666542 3455444 4433 33344556554
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.84 E-value=3e-18 Score=142.37 Aligned_cols=268 Identities=11% Similarity=0.074 Sum_probs=183.3
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
.|.+++|+|++..++..+.++.+..|.- .....+..+...+.+++|++++++++++..++.|.+||..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITA-----------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEEC-----------EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred ccceeeecCCccceeEEeecccCccccc-----------ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 4667889999888877777888888721 12334455666788999999999877888899999999988
Q ss_pred cceeeeeecCcccEEEEEECCCCCEEEEeeCC----CcEEEEecCCCEEEEEEe--CCCCCeeEEEEccCCCEEEEEeC-
Q 020798 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD----ETVRIWDVKTGKCLKVLP--AHSDPVTAVDFNRDGTMIVTSSY- 177 (321)
Q Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~- 177 (321)
++.......+...+.+++++|+++++++...+ +.|.+||..++.....+. .+...+..++++|+++++++...
T Consensus 76 ~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 76 KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccc
Confidence 77544333566779999999999888777666 689999988776443332 23456889999999987776653
Q ss_pred -----CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE-ecCCeEEEEeCCC-CcEEEEE-----eccCCce
Q 020798 178 -----DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYST-GKILKTY-----TGHTNSK 245 (321)
Q Consensus 178 -----dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~d~~i~i~d~~~-~~~~~~~-----~~~~~~~ 245 (321)
.+.|..+|..+++... +.. ....+..++|+|+|+.++++ ..++.|.+||+.+ +..+..+ ......
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~-~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~- 232 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRTVTP-IIQ-NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH- 232 (333)
T ss_dssp BTTBCCEEEEEECTTSCCEEE-EEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-
T ss_pred cccCCCceEEEEeCCCCEEEE-eec-CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-
Confidence 3567777766544322 211 12246789999999866554 4578999999863 3322211 101110
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCC------CeEEEEecCCCceEEEEee
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTD------PVISVASHPTENIIASGAL 307 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~------~v~~~~~~p~~~~l~s~~~ 307 (321)
.........++|.++++...++.|.+||. .++.+..+..+.. .+.+++|+|++..|..++.
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 12223344567888777777889999998 4566666654432 6899999999866655443
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=8.4e-18 Score=139.50 Aligned_cols=242 Identities=15% Similarity=0.180 Sum_probs=172.2
Q ss_pred CcccEEEEEECCCCCEEEEecCC------------------------ceEEEeeccccCCCCCCCCCccccc-ccccccE
Q 020798 22 HLRAISSVKFSHDGRLLASSSAD------------------------KTLLTYSLSSISNSDSTPPSPLQKF-TGHEQGV 76 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d------------------------~~v~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i 76 (321)
-.+.+..++++|+|+++++.+.+ +.|.+||.... ..+..+ .++-..+
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g--------~~~~~~~~~~~~~p 93 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA--------EILQSSGKNLFYLP 93 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC--------CEEEEECTTTCSSE
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC--------eEEeccCCCccCCc
Confidence 35689999999999999888777 36777765321 111112 1334568
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEecCCcc-eeeee---------ecCcccEEEEEECC-CCCEEEEee-CCCcEEEEec
Q 020798 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTAT-CLKTL---------IGHTNYVFCVNFNP-QSNMIVSGA-FDETVRIWDV 144 (321)
Q Consensus 77 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~~wd~ 144 (321)
..++++++|+++++...++.|++|+..... .+..+ .++......++++| +++.+++.+ .++.|++|+
T Consensus 94 ~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 899999999988888889999999986542 33333 23344688999999 777777776 689999999
Q ss_pred CCCEEEEEEeCC----------CCCeeEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeecc-CCCCCeEEEEEccCC
Q 020798 145 KTGKCLKVLPAH----------SDPVTAVDFNRD-GTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNG 212 (321)
Q Consensus 145 ~~~~~~~~~~~~----------~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~g 212 (321)
.+++.+..+... -.....++++|+ +.++++...++.|++||..+++.+..+.. .....+..++++| +
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G 251 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C
Confidence 456666555321 123789999998 77777777899999999987777666532 2344577888998 4
Q ss_pred CEEEEE-------ecCCeEEEEeCCCCcEEEEEe---ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 213 KFILVG-------TLDNTLRLWNYSTGKILKTYT---GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 213 ~~l~~~-------~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
..+... ..+..|++||..+++.+..+. .+...... ....++|.++++...++.|++|++..
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~---ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHD---IVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEE---EEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeE---EEECCCCCEEEEECCCCEEEEEeCCc
Confidence 333332 234589999999999988874 22222222 33457888889999999999999753
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.84 E-value=4.2e-18 Score=155.67 Aligned_cols=245 Identities=12% Similarity=0.121 Sum_probs=167.4
Q ss_pred cccccEEEEEECCCCCEEEEEeCCC-----cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCc-------
Q 020798 71 GHEQGVSDLVFSSDSRFLVSASDDK-----TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET------- 138 (321)
Q Consensus 71 ~h~~~i~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~------- 138 (321)
+|...+..++|||||++|+.+..++ .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3445688999999999998765543 8999999998765432222 22567899999999988887765
Q ss_pred ---------EEEEecCCCE----EEEEEeCCCCCeeEEEEccCCCEEEEEeC-----CCeEEEEeCCC------Cc-eee
Q 020798 139 ---------VRIWDVKTGK----CLKVLPAHSDPVTAVDFNRDGTMIVTSSY-----DGLCRIWDAST------GH-CMK 193 (321)
Q Consensus 139 ---------i~~wd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~------~~-~~~ 193 (321)
|++|++.+++ .+.....+...+..+.|+|+|+.++..+. +..+++||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 9999998765 22222224455789999999998887654 56899999876 42 233
Q ss_pred eeccCCCCCeEEEEEccCCCEEEEEecC----CeEEEEeCCCCcE--EEEEeccCCceeEEEeEEEecCCeEEEEeCCCC
Q 020798 194 TLIDDENPPVSFVKFSPNGKFILVGTLD----NTLRLWNYSTGKI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267 (321)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~g~~l~~~~~d----~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 267 (321)
.+.... ..... .|+|+|+.|+..+.. ..|.+||+.++.. ...+..+.... .+......+++.++++...++
T Consensus 281 ~l~~~~-~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 281 KLIDNF-EGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD-VLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEECSS-SSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-EEEEEEEETTTEEEEEEEETT
T ss_pred EeeCCC-CcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC-eEEEEEEEcCCEEEEEEEECC
Confidence 333322 22333 588898888776543 3699999987641 23333333211 122222235678888888888
Q ss_pred e--EEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE--eecCCccEEEcccc
Q 020798 268 C--VYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG--ALDNDRTVKIWTQE 319 (321)
Q Consensus 268 ~--i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~--~~d~~~~i~iw~~~ 319 (321)
. |.+|++.+++.+..+..+...+.+++++|++..++.. +....+.|.+||++
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 5 5667776777777788787789999999998765533 44456789999875
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=1.8e-18 Score=156.95 Aligned_cols=267 Identities=16% Similarity=0.158 Sum_probs=167.8
Q ss_pred eeccCCcccEE---------EEEEC--CCCCE-EEEecC-CceEEEeeccccCCCCCCCCCccccccc-----ccccEEE
Q 020798 17 QTLNGHLRAIS---------SVKFS--HDGRL-LASSSA-DKTLLTYSLSSISNSDSTPPSPLQKFTG-----HEQGVSD 78 (321)
Q Consensus 17 ~~~~~h~~~v~---------~~~~s--~~g~~-l~~~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~i~~ 78 (321)
+.+..|...+. ..+|+ |||++ |+..+. +..|.++++.. ........+.. |...+..
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~------~g~~~~~~l~~~~~~~~~~~~~~ 134 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDA------PGGAVPRPLTPVSAVGGGLRWAD 134 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTS------TTCCCCEECSCCCCSTTCEEEEE
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCC------CCCCCCEeccCCccCCCCccccC
Confidence 44556655555 55565 99998 776554 45555554320 00011222333 5677889
Q ss_pred EEECCCCCEEEEEeCC----------CcEEEEecCC------cceeeeee-cCcccEEEEEECCCCCEEEEeeCC-----
Q 020798 79 LVFSSDSRFLVSASDD----------KTIRLWDVPT------ATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFD----- 136 (321)
Q Consensus 79 ~~~~~~~~~l~~~~~d----------~~i~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----- 136 (321)
++|+|||+.|++++.+ ..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.+
T Consensus 135 ~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~ 213 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMP 213 (662)
T ss_dssp EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCT
T ss_pred cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCC
Confidence 9999999999988876 5799999988 553 4454 555677889999999999877754
Q ss_pred ---CcEEEEecC-CC---EEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC--eEEEEeCCCCceeeeeccCCCC------
Q 020798 137 ---ETVRIWDVK-TG---KCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG--LCRIWDASTGHCMKTLIDDENP------ 201 (321)
Q Consensus 137 ---g~i~~wd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~------ 201 (321)
..|++||+. ++ +.......+...+..++|+|+|++++++..++ .|.+||+.+++... +......
T Consensus 214 ~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~p~w 292 (662)
T 3azo_A 214 WEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ-LCRREEEFAGPLW 292 (662)
T ss_dssp TTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE-SSCCSSBSSCCCC
T ss_pred CCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceee-cccccccccCccc
Confidence 379999998 56 44444455567899999999999777777788 67777776655332 2211111
Q ss_pred --CeEEEEEccCCCEEEEEecCCeEEEE--eCCCCcEEEEEeccCCceeEEEeEEEecCCeE-EEEeCCCC--eEEEEEc
Q 020798 202 --PVSFVKFSPNGKFILVGTLDNTLRLW--NYSTGKILKTYTGHTNSKYCISSTFSVTNGKY-IVSGSEDS--CVYLWEL 274 (321)
Q Consensus 202 --~~~~~~~~~~g~~l~~~~~d~~i~i~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~dg--~i~vwd~ 274 (321)
.+..++|+|++++++++.. +.++|| |+.+++ +..+..+...... .+....+.+ +++++.+. .|.++|+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~---~~s~~~~~~~~~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAA---TLTVSGTRAVGVAASPRTAYEVVELDT 367 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEE---EEEEETTEEEEEEEETTEEEEEEEEET
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEE---EEecCCCEEEEEEcCCCCCCEEEEEEC
Confidence 1456889999999999888 988888 655554 5566555433222 212223333 33444454 4555566
Q ss_pred ccceEEEEecCCCCCeEEEEec
Q 020798 275 QSRKVVQKLEGHTDPVISVASH 296 (321)
Q Consensus 275 ~~~~~~~~~~~h~~~v~~~~~~ 296 (321)
.+++.......+...+....+.
T Consensus 368 ~~g~~~~l~~~~~~~~~~~~~~ 389 (662)
T 3azo_A 368 VTGRARTIGARHTDPVDPAYYP 389 (662)
T ss_dssp TTCCEEEEESCCCCSSCGGGSC
T ss_pred CCCceEEeecCCcccCCccccC
Confidence 6665433223343333333333
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=1.1e-18 Score=147.93 Aligned_cols=251 Identities=15% Similarity=0.104 Sum_probs=164.8
Q ss_pred ccccccccccEEE-----EEECCCCCEEEEEeC-CC--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCC
Q 020798 66 LQKFTGHEQGVSD-----LVFSSDSRFLVSASD-DK--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE 137 (321)
Q Consensus 66 ~~~~~~h~~~i~~-----~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 137 (321)
...++.|...... .+|+|||++|+.++. ++ .|.+||+.+++......++...+....|+|+++.|+.++.++
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGR 102 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTT
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCC
Confidence 3444555544444 789999999998887 66 488889988876655555655555678999999999999999
Q ss_pred cEEEEecCCCEEEEEEeCCCCCeeEEE--EccCCCEEEEE----------------------eCCCeEEEEeCCCCceee
Q 020798 138 TVRIWDVKTGKCLKVLPAHSDPVTAVD--FNRDGTMIVTS----------------------SYDGLCRIWDASTGHCMK 193 (321)
Q Consensus 138 ~i~~wd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~----------------------~~dg~i~~~d~~~~~~~~ 193 (321)
.|++||+.+++.......+...+.... ++|+++.++.. ..+..|.+||+.+++...
T Consensus 103 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (388)
T 3pe7_A 103 NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV 182 (388)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence 999999999887766666655444333 48999887643 234679999998876433
Q ss_pred eeccCCCCCeEEEEEcc-CCCEEEEEecC------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCC-
Q 020798 194 TLIDDENPPVSFVKFSP-NGKFILVGTLD------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE- 265 (321)
Q Consensus 194 ~~~~~~~~~~~~~~~~~-~g~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 265 (321)
.. .....+..+.|+| +|+.|+....+ ..|.++|...++.. .+..+..... +......+||+.|+..+.
T Consensus 183 l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~-~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 183 IL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGES-CTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp EE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEE-EEEEEECTTSSCEEEEEEE
T ss_pred ee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcc-cccceECCCCCEEEEEecC
Confidence 22 2234578899999 99988876653 37888887665433 3322222112 222334578886654332
Q ss_pred ----CCeEEEEEcccceE--EEEecCCCCC---eEEEEecCCCceEEEEee-------cCCccEEEccccc
Q 020798 266 ----DSCVYLWELQSRKV--VQKLEGHTDP---VISVASHPTENIIASGAL-------DNDRTVKIWTQEK 320 (321)
Q Consensus 266 ----dg~i~vwd~~~~~~--~~~~~~h~~~---v~~~~~~p~~~~l~s~~~-------d~~~~i~iw~~~~ 320 (321)
++.|++||+.+++. +..+.++... ....+|+|||+.|+.... +++..|++||.+.
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 259 KGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp TTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred CCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 22499999988763 3334331111 122479999998886532 3456899999763
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.83 E-value=1.7e-15 Score=123.59 Aligned_cols=281 Identities=10% Similarity=0.056 Sum_probs=190.4
Q ss_pred ccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEE
Q 020798 19 LNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIR 98 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~ 98 (321)
+..+...+.+++++|+|++.++...++.+..|+... .. .......+...+..+++.++++++++...++.|.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~-~~-------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLDG-KI-------TEYPLPTPDAKVMCLTISSDGEVWFTENAANKIG 81 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CE-------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCC-Ce-------EEecCCcccCceeeEEECCCCCEEEeCCCCCeEE
Confidence 445667899999999999887777678898887541 10 0001112346789999999999888777788899
Q ss_pred EEecCCcceeeeee--cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE-EeCCCCCeeEEEEccCCCEEEEE
Q 020798 99 LWDVPTATCLKTLI--GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV-LPAHSDPVTAVDFNRDGTMIVTS 175 (321)
Q Consensus 99 iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~ 175 (321)
.|+.. ++. ..+. .....+..++++++++.+++...++.|..||. +++.... .......+..+++.++++.+++.
T Consensus 82 ~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 82 RITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp EECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred EECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 99976 332 2222 24456889999999988887777889999998 5543322 23344568899999999887777
Q ss_pred eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEec
Q 020798 176 SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVT 255 (321)
Q Consensus 176 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (321)
..++.+..||. +++............+..++++++|+++++...++.|.+||. +++... +....... .+......+
T Consensus 159 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~-~~~~i~~~~ 234 (299)
T 2z2n_A 159 NQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNA-RPHAITAGA 234 (299)
T ss_dssp TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTC-CEEEEEECS
T ss_pred CCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCC-CceeEEECC
Confidence 77789999998 555433222223345778999999997766666789999998 666443 32211111 122333446
Q ss_pred CCeEEEEeCCCCeEEEEEcccceEEE-EecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 256 NGKYIVSGSEDSCVYLWELQSRKVVQ-KLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+|..+++...++.|..||. +++... .+..+...+.++++ +++.++++.+ . +.|..++.+
T Consensus 235 ~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~--~-~~l~~~~~~ 294 (299)
T 2z2n_A 235 GIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME--C-DKIGKLTLI 294 (299)
T ss_dssp TTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET--T-TEEEEEEEC
T ss_pred CCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec--C-CcEEEEEcC
Confidence 7887777667889999998 444322 23445567899999 8998888754 2 345555554
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=3.4e-18 Score=143.52 Aligned_cols=270 Identities=12% Similarity=0.111 Sum_probs=179.4
Q ss_pred CCCCEEEEec------CCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe----------CCCc
Q 020798 33 HDGRLLASSS------ADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS----------DDKT 96 (321)
Q Consensus 33 ~~g~~l~~~~------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~----------~d~~ 96 (321)
++++++++.. .|+.+.+||.... +.+..+..+..+ .++|+|++++++++. .++.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~--------~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~ 82 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNG--------KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDV 82 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTC--------CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCC--------eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCE
Confidence 3566665543 3678999986432 223344444444 899999999998876 2567
Q ss_pred EEEEecCCcceeeeeecC------cccEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEE-EeCCCCCeeEEEEcc
Q 020798 97 IRLWDVPTATCLKTLIGH------TNYVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKV-LPAHSDPVTAVDFNR 167 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~ 167 (321)
|.+||..+.+.+..+... ......++++|+|++|+++.. ++.|.+||+.+++.+.. ++.. ....+.+.|
T Consensus 83 v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p 160 (361)
T 2oiz_A 83 VEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQP 160 (361)
T ss_dssp EEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECT
T ss_pred EEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcC
Confidence 999999988877666432 234567899999999988764 57899999999988777 5432 223355677
Q ss_pred CC-CEEEEEeCCCeEEEEeCCC-Cceeeee-----ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc--EEEEE
Q 020798 168 DG-TMIVTSSYDGLCRIWDAST-GHCMKTL-----IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK--ILKTY 238 (321)
Q Consensus 168 ~~-~~l~~~~~dg~i~~~d~~~-~~~~~~~-----~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~--~~~~~ 238 (321)
++ ..+++.+.||.+.+++... ++..... ......+ ..+.+++++..++..+.++.+.++|+.... .+..+
T Consensus 161 ~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~ 239 (361)
T 2oiz_A 161 NRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPW 239 (361)
T ss_dssp TSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEE
T ss_pred CCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccc
Confidence 65 5778888999999998754 4433111 1111111 123446777777777788999999986543 22222
Q ss_pred eccC------Cc-eeEEEeEEEecCCeEEEEeCC-----------CCeEEEEEcccceEEEEecCCCCCeEEEEecCCCc
Q 020798 239 TGHT------NS-KYCISSTFSVTNGKYIVSGSE-----------DSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN 300 (321)
Q Consensus 239 ~~~~------~~-~~~~~~~~~~~~~~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 300 (321)
.... .. ..........+++..++++.. .+.|.+||+.+++.+..+..+. ..+++|+|+|+
T Consensus 240 ~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~ 317 (361)
T 2oiz_A 240 SLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN 317 (361)
T ss_dssp ESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT
T ss_pred cccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC
Confidence 1100 00 000000122356555554422 3589999999999999998877 89999999999
Q ss_pred eEEEEeecCCccEEEccccc
Q 020798 301 IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~~ 320 (321)
+|++++ . +.|.+||.+.
T Consensus 318 ~l~v~n--~-~~v~v~D~~t 334 (361)
T 2oiz_A 318 LMLTLD--G-GNVNVYDISQ 334 (361)
T ss_dssp EEEEEC--S-SCEEEEECSS
T ss_pred EEEEeC--C-CeEEEEECCC
Confidence 998876 2 7899999763
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=1.6e-17 Score=138.78 Aligned_cols=259 Identities=14% Similarity=0.193 Sum_probs=166.5
Q ss_pred cccEEEEEECCCCCEEEEec---------CCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC
Q 020798 23 LRAISSVKFSHDGRLLASSS---------ADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD 93 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~---------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~ 93 (321)
...+..+++ ||++++... .++.|.+|++.... ...+ ..+..+.|+|||++|+..+.
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~---------~~~l----~~~~~~~~SpDg~~la~~~~ 78 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA---------RRFI----ENATMPRISPDGKKIAFMRA 78 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC---------EEEE----ESCEEEEECTTSSEEEEEEE
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc---------eEEc----ccCCCeEECCCCCEEEEEEe
Confidence 356777888 898887642 25667777765321 1122 45788999999999987765
Q ss_pred C---C--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC---------------------------CcEEE
Q 020798 94 D---K--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD---------------------------ETVRI 141 (321)
Q Consensus 94 d---~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~~ 141 (321)
+ + .|.+|++.+++...... +.. +..+.|+|+++.|+.++.+ ..|++
T Consensus 79 ~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (347)
T 2gop_A 79 NEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWI 156 (347)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEE
T ss_pred ccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEE
Confidence 4 3 47888888776544333 334 8899999999988877632 57899
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC-------eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCE
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG-------LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKF 214 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 214 (321)
||+.+++.+..+.. . .+..++|+|++ +++++..+. ...+|.+.+++. ..+... ..+.. ++|+|++
T Consensus 157 ~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~--~~~~~--~spdg~~ 228 (347)
T 2gop_A 157 FDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK--VSFYA--VDSDGER 228 (347)
T ss_dssp EETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE--ESEEE--EEECSSC
T ss_pred EECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC--cceee--ECCCCCE
Confidence 99998876344443 3 78899999999 777775542 334443334432 333222 23333 3999998
Q ss_pred EEEEecC--------CeEEEEeCCCCcEEEEEeccCCceeEEEe-EEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC
Q 020798 215 ILVGTLD--------NTLRLWNYSTGKILKTYTGHTNSKYCISS-TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 215 l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
|+..+.+ ..|.+|| +++.......+... +.. ..+. ++ ++++++.++.+++| +.+++.. .+..
T Consensus 229 l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~---~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~ 299 (347)
T 2gop_A 229 ILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRG---VGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAK 299 (347)
T ss_dssp EEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSE---EEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEEC
T ss_pred EEEEEccccCCccccceEEEEC--CCceEeccccCCcc---cCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEec
Confidence 8877643 3688888 55543333332222 221 2334 67 88889999999999 8765543 3444
Q ss_pred CCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 286 HTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 286 h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+...|.+++|+| .++++++.+ +....||..
T Consensus 300 ~~~~v~~~~~s~--~~~~~~~~~-~~~~~l~~~ 329 (347)
T 2gop_A 300 GRHWIMGFDVDE--IVVYLKETA-TRLRELFTW 329 (347)
T ss_dssp SSSEEEEEEESS--SEEEEEECS-SSCCEEEEE
T ss_pred CCCeEEeeeeeC--cEEEEEcCC-CChHHheEe
Confidence 577899999999 566665543 222356643
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.81 E-value=1.1e-17 Score=152.64 Aligned_cols=279 Identities=11% Similarity=0.044 Sum_probs=175.4
Q ss_pred ECCCCCEEEEecCCc---eEEEeeccccCCCCCCCCCcccc----cccccccEEEEEECCCCCEEEE-----EeCCCcEE
Q 020798 31 FSHDGRLLASSSADK---TLLTYSLSSISNSDSTPPSPLQK----FTGHEQGVSDLVFSSDSRFLVS-----ASDDKTIR 98 (321)
Q Consensus 31 ~s~~g~~l~~~~~d~---~v~~~~~~~~~~~~~~~~~~~~~----~~~h~~~i~~~~~~~~~~~l~~-----~~~d~~i~ 98 (321)
.+|+|++++....++ .-.+|-.... ......+.. -.+|...+..++|||||++|+. |+.+..|+
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~ 150 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGE----SGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLH 150 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEEST----TSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCC----CCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEE
Confidence 348999888766544 3445543211 111111111 1245567899999999999983 34456899
Q ss_pred EEecCCccee-eeeecCcccEEEEEECCCCCEEEEeeCCCc-------------EEEEecCCCE----EEEEEeCCCCCe
Q 020798 99 LWDVPTATCL-KTLIGHTNYVFCVNFNPQSNMIVSGAFDET-------------VRIWDVKTGK----CLKVLPAHSDPV 160 (321)
Q Consensus 99 iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------i~~wd~~~~~----~~~~~~~~~~~v 160 (321)
+||+.+++.+ ....... ....++|+|||+.|+.++.+.. |++|++.++. ++.....+...+
T Consensus 151 v~dl~tg~~~~~~~~~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~ 229 (695)
T 2bkl_A 151 VIDVDSGEWSKVDVIEGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF 229 (695)
T ss_dssp EEETTTCCBCSSCCBSCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE
T ss_pred EEECCCCCCcCCcccCcc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE
Confidence 9999998754 2111111 1157899999999999888766 9999998765 333333455678
Q ss_pred eEEEEccCCCEEEEEeCCC----eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe---cCCeEEEEeCCCCc
Q 020798 161 TAVDFNRDGTMIVTSSYDG----LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT---LDNTLRLWNYSTGK 233 (321)
Q Consensus 161 ~~~~~~~~~~~l~~~~~dg----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~---~d~~i~i~d~~~~~ 233 (321)
..+.|+|+|+.++..+.++ .+.++|..++.. ..+..... ......+ ++|.+++.+. .++.|.+||+.+++
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~-~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVG-AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSS-CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCC-ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 8999999999888776555 677777655442 23322222 3344445 5666444333 25789999998765
Q ss_pred E---EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc-cceEEEEecCC-CCCeEEEEecCCCceEEEE--e
Q 020798 234 I---LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ-SRKVVQKLEGH-TDPVISVASHPTENIIASG--A 306 (321)
Q Consensus 234 ~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~--~ 306 (321)
. ...+..+... ......+. ++.++++...|+..++|.+. .++....+..+ ...|..++++|++..++.. +
T Consensus 307 ~~~~~~l~~~~~~~-~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss 383 (695)
T 2bkl_A 307 RASWKEIVPEDSSA-SLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTS 383 (695)
T ss_dssp GGGCEEEECCCSSC-EEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEE
T ss_pred ccCCeEEecCCCCC-eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcC
Confidence 2 3333222121 11112222 67888999999988888765 35556666655 5678889999998766643 3
Q ss_pred ecCCccEEEccccc
Q 020798 307 LDNDRTVKIWTQEK 320 (321)
Q Consensus 307 ~d~~~~i~iw~~~~ 320 (321)
....++|++||++.
T Consensus 384 ~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 384 FTTPRQIYKTSVST 397 (695)
T ss_dssp TTEEEEEEEEETTT
T ss_pred CCCCCEEEEEECCC
Confidence 33457899998753
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.80 E-value=7.5e-16 Score=135.87 Aligned_cols=275 Identities=12% Similarity=0.108 Sum_probs=192.0
Q ss_pred CCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC--Ccceeee
Q 020798 33 HDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP--TATCLKT 110 (321)
Q Consensus 33 ~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~ 110 (321)
|.+.++++...++.|.++|.... ..+..+.. ...+..+.|+|||+++++++.|+.|.+||+. +.+.+..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY--------EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC--------CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCC--------eEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE
Confidence 44566777888999999987542 22333332 2356789999999999999999999999995 7777666
Q ss_pred eecCcccEEEEEEC----CCCCEEEEee-CCCcEEEEecCCCEEEEEEeCC-----------CCCeeEEEEccCCCEEE-
Q 020798 111 LIGHTNYVFCVNFN----PQSNMIVSGA-FDETVRIWDVKTGKCLKVLPAH-----------SDPVTAVDFNRDGTMIV- 173 (321)
Q Consensus 111 ~~~~~~~v~~~~~~----~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~- 173 (321)
+... .....++++ |+|+++++++ .++.+.++|..+.+.+..+... ...+..+..++++..++
T Consensus 236 i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 236 IKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred EecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 6543 345789999 6999877665 5689999999998887776532 12567788888766544
Q ss_pred EEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcEEEEEec-cCCce--eEEE
Q 020798 174 TSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKILKTYTG-HTNSK--YCIS 249 (321)
Q Consensus 174 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~~~~~~~-~~~~~--~~~~ 249 (321)
.....|.|.++|....................+.|+|+|++++++. .++.|.++|+.+++++..+.. ...+. ....
T Consensus 315 ~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~ 394 (567)
T 1qks_A 315 NVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN 394 (567)
T ss_dssp EETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred EecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee
Confidence 4556799999998765432222112334466788999999987766 578999999999998877654 22111 1122
Q ss_pred eEEEecC-CeEEEEeC-CCCeEEEEEccc-------ceEEEEecCCCCCeEEEEecCCCceEEEEee-cC----CccEEE
Q 020798 250 STFSVTN-GKYIVSGS-EDSCVYLWELQS-------RKVVQKLEGHTDPVISVASHPTENIIASGAL-DN----DRTVKI 315 (321)
Q Consensus 250 ~~~~~~~-~~~l~~~~-~dg~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~-d~----~~~i~i 315 (321)
+..++ +..++++. .++.|.++|..+ .+.++.+......-..+..+|++++|-.... .. ...|.+
T Consensus 395 --~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v 472 (567)
T 1qks_A 395 --FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV 472 (567)
T ss_dssp --EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE
T ss_pred --eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEE
Confidence 33455 55555554 568999999987 5677877765433356788999988776541 11 247889
Q ss_pred cccc
Q 020798 316 WTQE 319 (321)
Q Consensus 316 w~~~ 319 (321)
+|.+
T Consensus 473 ~d~~ 476 (567)
T 1qks_A 473 FDIK 476 (567)
T ss_dssp EEGG
T ss_pred EECC
Confidence 8875
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=3.4e-16 Score=127.83 Aligned_cols=228 Identities=11% Similarity=0.079 Sum_probs=161.6
Q ss_pred cccccccccEEEEEECCCCC-EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 67 QKFTGHEQGVSDLVFSSDSR-FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 67 ~~~~~h~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
..+..+.....+++|+|+++ +++++..++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 34445556678999999998 7778888999999999877 45566677778999999999988877777899999997
Q ss_pred CCEEEEEEeCC----CCCeeEEEEccCCCEEEEEe-----------------CCCeEEEEeCCCCceeeeeccCCCCCeE
Q 020798 146 TGKCLKVLPAH----SDPVTAVDFNRDGTMIVTSS-----------------YDGLCRIWDASTGHCMKTLIDDENPPVS 204 (321)
Q Consensus 146 ~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 204 (321)
+++........ ...+..++++|+|+++++.. ..+.|..++.. ++. ..+. .......
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~-~~~~~~~ 175 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPI-RDRVKPN 175 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEE-CCCSSEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEee-cCCCCCc
Confidence 77654332211 23456899999999888732 13456666655 332 2222 2334567
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCC-CCcE---EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEE
Q 020798 205 FVKFSPNGKFILVGTLDNTLRLWNYS-TGKI---LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 205 ~~~~~~~g~~l~~~~~d~~i~i~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
.++|+|+|+.+++...++.|.+|++. +++. ...+......... ....++|.++++. ++.|.+||.. ++.+
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~---i~~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG---LRVDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS---EEEBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe---EEECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 89999999998666678899999986 5554 2333111111122 2334678866665 7889999986 7777
Q ss_pred EEecCCCCCeEEEEe-cCCCceEEEEe
Q 020798 281 QKLEGHTDPVISVAS-HPTENIIASGA 306 (321)
Q Consensus 281 ~~~~~h~~~v~~~~~-~p~~~~l~s~~ 306 (321)
..+..+.. +.+++| .|+++.|..++
T Consensus 250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 250 GRVLTPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp EEEECSSC-CCEEEEESTTSCEEEEEE
T ss_pred EEEECCCC-ceeEEEECCCCCEEEEEc
Confidence 77777777 899999 68988877776
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=3.9e-16 Score=127.47 Aligned_cols=242 Identities=11% Similarity=0.078 Sum_probs=167.3
Q ss_pred eeccCCcccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 17 QTLNGHLRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
..+..+.....+++|+|+|+ +++++..++.|..|+.... ...+..+...+.+++++++|+++++...++
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~ 90 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----------LSPEMHPSHHQNGHCLNKQGHLIACSHGLR 90 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----------EEEEESSCSSEEEEEECTTCCEEEEETTTT
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----------eEEEECCCCCcceeeECCCCcEEEEecCCC
Confidence 44455667788999999998 7888888999999976431 234445667789999999999887777778
Q ss_pred cEEEEecCCcceeeeeecC----cccEEEEEECCCCCEEEE----ee-------------CCCcEEEEecCCCEEEEEEe
Q 020798 96 TIRLWDVPTATCLKTLIGH----TNYVFCVNFNPQSNMIVS----GA-------------FDETVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~----~~-------------~dg~i~~wd~~~~~~~~~~~ 154 (321)
.|.+||..+++........ ...+..++++|+|+++++ +. ..+.|..++.. ++ ...+.
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~ 168 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPI 168 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEee
Confidence 9999999777643322111 123567899999998887 32 13456666655 44 33344
Q ss_pred CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCC-CCce---eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS-TGHC---MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
.+......++|+|+++.+++.+.++.|.+||+. ++.. ...+ ......+..++++++|+++++. ++.|.+||..
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 555667899999999988777778999999986 4443 2222 2223345678999999866655 8899999976
Q ss_pred CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce
Q 020798 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
++.+..+..+.. ...+ .+..++++.|++++.++ +.-++..+.+
T Consensus 246 -g~~~~~~~~~~~-~~~~--~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 246 -GDELGRVLTPQT-TSNL--CFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp -SCEEEEEECSSC-CCEE--EEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred -CCEEEEEECCCC-ceeE--EEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 777777766554 3332 34356787787777654 4445665544
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.78 E-value=1.7e-16 Score=145.05 Aligned_cols=245 Identities=13% Similarity=0.108 Sum_probs=163.9
Q ss_pred CCcccEEEEEECCCCCEEEEecCCc-----eEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 21 GHLRAISSVKFSHDGRLLASSSADK-----TLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d~-----~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
+|...+..++|||||++||.++.++ .|++|++.+.. .+. .......+..++|+|||+.|+.++.++
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------~~~-~~~~~~~~~~~~wspDg~~l~~~~~~~ 192 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------ELP-DVLERVKFSCMAWTHDGKGMFYNAYPQ 192 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------EEE-EEEEEECSCCEEECTTSSEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCc-ccccCcccceEEEEeCCCEEEEEEECC
Confidence 4555788999999999998765433 89999876422 111 111122356799999999999888776
Q ss_pred c----------------EEEEecCCccee----eeeecCcccEEEEEECCCCCEEEEeeC-----CCcEEEEecCC----
Q 020798 96 T----------------IRLWDVPTATCL----KTLIGHTNYVFCVNFNPQSNMIVSGAF-----DETVRIWDVKT---- 146 (321)
Q Consensus 96 ~----------------i~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~wd~~~---- 146 (321)
. |++|++.+++.. .....+...+..+.|+|||++|+..+. +..|++||+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 193 QDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred ccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccc
Confidence 5 999999877522 122224556788999999999877654 56899999976
Q ss_pred --CE-EEEEEeCCCCCeeEEEEccCCCEEEEEeCC----CeEEEEeCCCCce--eeeeccCCC-CCeEEEEEccCCCEEE
Q 020798 147 --GK-CLKVLPAHSDPVTAVDFNRDGTMIVTSSYD----GLCRIWDASTGHC--MKTLIDDEN-PPVSFVKFSPNGKFIL 216 (321)
Q Consensus 147 --~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~--~~~~~~~~~-~~~~~~~~~~~g~~l~ 216 (321)
+. ....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..... ..+..+.+++++.+++
T Consensus 273 ~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~ 351 (710)
T 2xdw_A 273 ITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVL 351 (710)
T ss_dssp SCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEE
T ss_pred cCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEE
Confidence 42 34455555555544 478888877766543 3699999987631 233333322 2567788887777788
Q ss_pred EEecCC--eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEE-Ee---CCCCeEEEEEcccce
Q 020798 217 VGTLDN--TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV-SG---SEDSCVYLWELQSRK 278 (321)
Q Consensus 217 ~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~---~~dg~i~vwd~~~~~ 278 (321)
+...++ .|.+||+.+++.+..+..+.... ......+++..++ +. ...+.|+.||+.+++
T Consensus 352 ~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v---~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 352 CYLHDVKNTLQLHDLATGALLKIFPLEVGSV---VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEECCCSSEE---EEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEECCEEEEEEEECCCCCEEEecCCCCceE---EEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 888887 46677877787777776653322 2222234665444 32 356789999998765
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.78 E-value=2.4e-16 Score=126.84 Aligned_cols=239 Identities=9% Similarity=-0.041 Sum_probs=160.4
Q ss_pred cEEEEEECCCCCEEE-EEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 75 GVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
...++++++++++++ +...++.|.+|+..+.........+...+..++++++++.+++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 678899999999776 547788999999766543222222334577899999988666655 889999998765432221
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~ 233 (321)
......+..+++.++++++++...++.|.+|+..+....... ......+..++++++|+++++...++.|.+||.....
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 122356789999999987777777889999986554322211 1112345678999999977766677899999987765
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccE
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTV 313 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i 313 (321)
............ ......++|.++++...++.|.+|+............+...+.+++++|+|+++++.+ .++.|
T Consensus 183 ~~~~~~~~~~~p---~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~--~~~~v 257 (270)
T 1rwi_B 183 QVVLPFTDITAP---WGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADR--GNDRV 257 (270)
T ss_dssp EEECCCSSCCSE---EEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEG--GGTEE
T ss_pred eEeecccCCCCc---eEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEEC--CCCEE
Confidence 443222221222 2233446777777777889999999876544332223345689999999999877765 35789
Q ss_pred EEccccc
Q 020798 314 KIWTQEK 320 (321)
Q Consensus 314 ~iw~~~~ 320 (321)
++++...
T Consensus 258 ~~~~~~~ 264 (270)
T 1rwi_B 258 VKLTSLE 264 (270)
T ss_dssp EEECCCG
T ss_pred EEEcCCC
Confidence 9998754
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.78 E-value=5.6e-16 Score=124.91 Aligned_cols=214 Identities=12% Similarity=0.137 Sum_probs=166.3
Q ss_pred CCCEEEEEeCCCcEEEEecCCcceeeeeecCc-ccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCC-CCee
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHT-NYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS-DPVT 161 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~v~ 161 (321)
.++.|++++.++.|.+||.++++.+..+..+. ..+..+.+.|+|+.++ +.++.|+.||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46789999999999999999999888887665 4678899999999888 34678999998 788888777643 4678
Q ss_pred EEEEccCCCEEEEEeC-CCeEEEEeCCCCceeeeeccCC-----CCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEE
Q 020798 162 AVDFNRDGTMIVTSSY-DGLCRIWDASTGHCMKTLIDDE-----NPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL 235 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~ 235 (321)
++.+.++|+.+++.+. ++.+..+|. +++.+..+.... ......+...++|+++++...++.|..||.. ++.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 8999999999998887 788888886 555554432111 1123446788999999998899999999987 9999
Q ss_pred EEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC------CCeEEEEecCCCceEEEEe
Q 020798 236 KTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT------DPVISVASHPTENIIASGA 306 (321)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~------~~v~~~~~~p~~~~l~s~~ 306 (321)
..+.....+ ... ...+++..++++..++.|..+|..+++.+.++..+. ..+.+++..++|+++++..
T Consensus 159 w~~~~~~~~-~~~---~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 159 NSVKLSGTP-FSS---AFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEECSSCC-CEE---EECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEECCCCc-cce---eEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 888764322 222 224688999988888899999999999988876432 2378888999999998874
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=4.1e-18 Score=144.78 Aligned_cols=237 Identities=11% Similarity=0.064 Sum_probs=153.3
Q ss_pred EEEEEECCCCCEEEEEeCC---CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE
Q 020798 76 VSDLVFSSDSRFLVSASDD---KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 152 (321)
+..++|+|+|++|+..... ..|.+||+.+++......++......+.|+|+++.|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 6678899999998776543 3688889888765433232322223367999999999999889999999988876655
Q ss_pred EeCCCCCeeE-------------------EEEccCCCEEEEE-----eCCCeEEEEeCCCCceeeeeccCCCCCeEEEEE
Q 020798 153 LPAHSDPVTA-------------------VDFNRDGTMIVTS-----SYDGLCRIWDASTGHCMKTLIDDENPPVSFVKF 208 (321)
Q Consensus 153 ~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 208 (321)
...+...... +.|+|+++.++.. ..+..|.+||+.+++..... .....+..+.|
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~~ 195 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH--QDTAWLGHPIY 195 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE--EESSCEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec--cCCcccccceE
Confidence 5444332222 2456776655443 35668999999887654333 23445778999
Q ss_pred cc-CCCEEEEEecC------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEccc
Q 020798 209 SP-NGKFILVGTLD------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQS 276 (321)
Q Consensus 209 ~~-~g~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~ 276 (321)
+| +++.|+..+.+ ..|.+||+..++... +..+.. ...+......++|++|+..+.+ +.|++||+.+
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAE-GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCT-TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCC-CccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 99 78877665543 368889987654332 222211 1223333445788877665433 4599999987
Q ss_pred ceEEEEecCCCCCeEEEEecC-CCceEEEEee--------------cCCccEEEcccc
Q 020798 277 RKVVQKLEGHTDPVISVASHP-TENIIASGAL--------------DNDRTVKIWTQE 319 (321)
Q Consensus 277 ~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~~~--------------d~~~~i~iw~~~ 319 (321)
++...... .. ... +.|+| ++++++.++. +++..|++||.+
T Consensus 274 g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 274 LENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp CCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred CCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 76433221 11 123 89999 9998887642 234679999875
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=1.2e-16 Score=145.73 Aligned_cols=246 Identities=13% Similarity=0.072 Sum_probs=159.0
Q ss_pred CCcccEEEEEECCCCCEEE-----EecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 21 GHLRAISSVKFSHDGRLLA-----SSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~-----~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
+|...+..++|||||++|| .|+.+..|++|++.+..... ...+... ....++|+|||+.|+.++.+.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~------~~~~~~~--~~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK------VDVIEGG--KYATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS------SCCBSCC--TTCCCEECTTSSEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC------CcccCcc--cccceEEecCCCEEEEEEecC
Confidence 5666799999999999999 56666899999987543210 0011111 125789999999999988877
Q ss_pred c-------------EEEEecCCcc----eeeeeecCcccEEEEEECCCCCEEEEeeCCC----cEEEEecCCCEEEEEEe
Q 020798 96 T-------------IRLWDVPTAT----CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE----TVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 96 ~-------------i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~wd~~~~~~~~~~~ 154 (321)
. |++|++.++. .+.....+...+..+.++|||++|+.++.++ .|++|+..+++.. .+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~ 268 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV 268 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee
Confidence 6 9999998775 2223334556788999999999988777655 6777776555433 344
Q ss_pred CCCCCeeEEEEccCCCEEEEEe---CCCeEEEEeCCCCce--eeeeccCC-CCCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSS---YDGLCRIWDASTGHC--MKTLIDDE-NPPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~---~dg~i~~~d~~~~~~--~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
.+...+....+ +++.+++.+. .++.|.+||+.++.. ...+.... ...+..+.++ ++.++++...|+..++|.
T Consensus 269 ~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 269 KGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp ECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred cCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 44555566666 5666444443 257899999977642 23333332 3446777777 677778888898877775
Q ss_pred CC-CCcEEEEEeccCCceeEEEeEEEecCCeEEE----EeCCCCeEEEEEcccceE
Q 020798 229 YS-TGKILKTYTGHTNSKYCISSTFSVTNGKYIV----SGSEDSCVYLWELQSRKV 279 (321)
Q Consensus 229 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~dg~i~vwd~~~~~~ 279 (321)
+. +++.+..+..+... .+......+++..++ +....+.|++||+.+++.
T Consensus 347 ~~~~g~~~~~l~~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 347 ATLKGKPVRTVQLPGVG--AASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EETTCCEEEECCCSSSS--EECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EeCCCCeeEEecCCCCe--EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 54 35555555433111 122122234665555 334567899999987653
No 189
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=8.1e-14 Score=113.59 Aligned_cols=280 Identities=9% Similarity=0.023 Sum_probs=188.0
Q ss_pred cCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEE
Q 020798 20 NGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRL 99 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~i 99 (321)
......+.++++.++|++.++...++.|..|+.. ... . ...+..+...+..+++.++++++++...++.|..
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~------~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI------K-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGK 87 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE------E-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce------E-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEE
Confidence 3445688899999999988887778889888754 110 0 0011223356889999999987777766788999
Q ss_pred EecCCcceee-eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE-EEeCCCCCeeEEEEccCCCEEEEEeC
Q 020798 100 WDVPTATCLK-TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK-VLPAHSDPVTAVDFNRDGTMIVTSSY 177 (321)
Q Consensus 100 wd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~ 177 (321)
||.. ++... ........+..+++.++++.+++...++.|..+|.. ++... .+......+..+++.++++++++...
T Consensus 88 ~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 165 (300)
T 2qc5_A 88 LSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQ 165 (300)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred ECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecC
Confidence 9987 54322 222234568899999999888877768899999987 54432 23334456889999999997766666
Q ss_pred CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEE-eccCCceeEEEeEEEecC
Q 020798 178 DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTY-TGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 178 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 256 (321)
++.|..+|. +++............+..++++++|+++++....+.|.+||. +++..... ...... .......++
T Consensus 166 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~---~~~i~~d~~ 240 (300)
T 2qc5_A 166 NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNAR---PHAITAGKN 240 (300)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCC---EEEEEECST
T ss_pred CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCC---ceEEEECCC
Confidence 788999998 444333222223345778999999987776666778999998 55544332 111122 222334467
Q ss_pred CeEEEEeCCCCeEEEEEcccceEE-EEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 257 GKYIVSGSEDSCVYLWELQSRKVV-QKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
|.++++...++.|..||.. ++.. ..+......+.++++.++|+++++.. + .|..++.+
T Consensus 241 g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~---~-~i~~~~p~ 299 (300)
T 2qc5_A 241 SEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK---C-KIGKLNLN 299 (300)
T ss_dssp TCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS---S-EEEEEEEC
T ss_pred CCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc---C-ceEEeCCC
Confidence 8877777677899999984 4332 22333445689999999998777643 2 56666554
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.76 E-value=3e-14 Score=125.73 Aligned_cols=284 Identities=13% Similarity=0.113 Sum_probs=190.5
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEEC----CCCCEEEEEeC-CCcEEE
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFS----SDSRFLVSASD-DKTIRL 99 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~----~~~~~l~~~~~-d~~i~i 99 (321)
.+..++|+|||+++++++.++.|.+||+... ....+..+.. ......++|+ |+|++++++.. ++++.+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~------t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~V 270 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMK------EPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVI 270 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSS------SCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCC------CCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEE
Confidence 5668999999999999999999999997410 1122333332 2346789999 69998877654 589999
Q ss_pred EecCCcceeeeeec----------Ccc-cEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEE--EEEeCCCCCeeEEEE
Q 020798 100 WDVPTATCLKTLIG----------HTN-YVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCL--KVLPAHSDPVTAVDF 165 (321)
Q Consensus 100 wd~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~--~~~~~~~~~v~~~~~ 165 (321)
+|..+.+.+..+.. |.. .+..+..++++.. ++....+|.|.++|..+.+.. ..+. .......+.|
T Consensus 271 iD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~ 349 (567)
T 1qks_A 271 MDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGL 349 (567)
T ss_dssp EETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEE
T ss_pred EECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceE
Confidence 99999887766542 112 5677888887655 455567799999998765322 2232 2345678899
Q ss_pred ccCCCEEEEEe-CCCeEEEEeCCCCceeeeecc-CCCC-CeEEE-EEccCCCEE-EEEe-cCCeEEEEeCCC-------C
Q 020798 166 NRDGTMIVTSS-YDGLCRIWDASTGHCMKTLID-DENP-PVSFV-KFSPNGKFI-LVGT-LDNTLRLWNYST-------G 232 (321)
Q Consensus 166 ~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~-~~~~-~~~~~-~~~~~g~~l-~~~~-~d~~i~i~d~~~-------~ 232 (321)
+|++++++++. .++.|.++|+.+++....+.. ...+ +-..+ .++|++..+ +++. .++.|.++|..+ .
T Consensus 350 ~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~ 429 (567)
T 1qks_A 350 DGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW 429 (567)
T ss_dssp CTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccC
Confidence 99999877655 678999999999887655543 2111 10112 267875444 4443 468999999987 6
Q ss_pred cEEEEEeccCCceeEEEeEEEecCCeEEEEeCC-------CCeEEEEEcccc-----e-EEEEec--------CCCCCeE
Q 020798 233 KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE-------DSCVYLWELQSR-----K-VVQKLE--------GHTDPVI 291 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------dg~i~vwd~~~~-----~-~~~~~~--------~h~~~v~ 291 (321)
+.++.+.........+ ...++++++.+... .+.|.|||+.+. . ....+. .-...+.
T Consensus 430 kvv~~i~~~g~g~~~i---~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 430 KILDSFPALGGGSLFI---KTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp SEEEEEECSCSCCCCE---ECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred EEEEEEecCCCCCEEE---EeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 7788876543222222 23578888877653 358999999876 2 112221 1235789
Q ss_pred EEEecCCCceEEEEee---cCCccEEEcccc
Q 020798 292 SVASHPTENIIASGAL---DNDRTVKIWTQE 319 (321)
Q Consensus 292 ~~~~~p~~~~l~s~~~---d~~~~i~iw~~~ 319 (321)
.+.|+|+|+++-.+.. +.++.|.++|.+
T Consensus 507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNGKDQESALVVVDDK 537 (567)
T ss_dssp EEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred eeeECCCCCEEEEEeecCCCCCCcEEEEECC
Confidence 9999999987666533 235788888865
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=1e-15 Score=123.18 Aligned_cols=241 Identities=9% Similarity=-0.013 Sum_probs=161.8
Q ss_pred cEEEEEECCCCCEEE-EecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC
Q 020798 25 AISSVKFSHDGRLLA-SSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP 103 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 103 (321)
...+++++|+|++++ +.+.++.|..|+...... ......+...+.+++++++++++++.. ++.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~--------~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT--------TVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc--------ceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCC
Confidence 778999999999777 557788898887543211 000012234577899999998666555 8899999987
Q ss_pred CcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEE
Q 020798 104 TATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRI 183 (321)
Q Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 183 (321)
..............+..++++++++.+++...++.|.+|+..+.............+..++++++++++++...++.|.+
T Consensus 96 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 96 SNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK 175 (270)
T ss_dssp CSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEE
T ss_pred CceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEE
Confidence 65432221223356789999999987777777889999986554333222222345688999999987777777889999
Q ss_pred EeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEe
Q 020798 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263 (321)
Q Consensus 184 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (321)
||........... .....+..++++++|.++++...++.|.+||............+... .......++|+++++.
T Consensus 176 ~~~~~~~~~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~---p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 176 LEAESNNQVVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNT---PLAVAVDSDRTVYVAD 251 (270)
T ss_dssp ECTTTCCEEECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSC---EEEEEECTTCCEEEEE
T ss_pred EecCCCceEeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCC---ceeEEECCCCCEEEEE
Confidence 9987655432221 22245788999999977776667889999998665433211111112 2223334678888888
Q ss_pred CCCCeEEEEEcccce
Q 020798 264 SEDSCVYLWELQSRK 278 (321)
Q Consensus 264 ~~dg~i~vwd~~~~~ 278 (321)
..++.|+++++...+
T Consensus 252 ~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 252 RGNDRVVKLTSLEHH 266 (270)
T ss_dssp GGGTEEEEECCCGGG
T ss_pred CCCCEEEEEcCCCcc
Confidence 899999999987654
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.76 E-value=6.4e-16 Score=141.90 Aligned_cols=279 Identities=12% Similarity=0.065 Sum_probs=172.1
Q ss_pred CCCCCEEEEecCCce---EEEeeccccCCCCCCCCCccc----ccccccccEEEEEECCCCCEEEEEeCC-----CcEEE
Q 020798 32 SHDGRLLASSSADKT---LLTYSLSSISNSDSTPPSPLQ----KFTGHEQGVSDLVFSSDSRFLVSASDD-----KTIRL 99 (321)
Q Consensus 32 s~~g~~l~~~~~d~~---v~~~~~~~~~~~~~~~~~~~~----~~~~h~~~i~~~~~~~~~~~l~~~~~d-----~~i~i 99 (321)
+|+|++++....++. -.+|....... .......+. .-.+|...+..++|||||++|+.++.+ ..|++
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAP-VGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSC-TTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCcc-CCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 489998887655443 45564431100 001111110 112344468899999999999876543 35999
Q ss_pred EecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCc--------------EEEEecCCCEE--EEEEe--CCCCCee
Q 020798 100 WDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDET--------------VRIWDVKTGKC--LKVLP--AHSDPVT 161 (321)
Q Consensus 100 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~~wd~~~~~~--~~~~~--~~~~~v~ 161 (321)
||+.+++.+... .+...+..++|+|| +.|+.+..++. |++|++.++.. ...+. .+...+.
T Consensus 194 ~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~ 271 (741)
T 1yr2_A 194 VGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH 271 (741)
T ss_dssp EETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred EECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence 999998765431 12222347889999 88888776554 88999876541 22222 2333578
Q ss_pred EEEEccCCCEEEEEeCC-----CeEEEEeCCCC--ceeeeeccCCCCCeEEEEEccCCCEEEEEec----CCeEEEEeCC
Q 020798 162 AVDFNRDGTMIVTSSYD-----GLCRIWDASTG--HCMKTLIDDENPPVSFVKFSPNGKFILVGTL----DNTLRLWNYS 230 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~----d~~i~i~d~~ 230 (321)
.+.|+|+|+.++..+.+ ..+++||+.++ ++...+...... .... ++|+|+.|+..+. ++.|.+||+.
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA-QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS-CEEE-EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc-eEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 99999999988877644 38999998776 313333333322 3333 3488888887765 3469999988
Q ss_pred CC--cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcc-cceEEEEecCC-CCCeEEEEecCCCceEEEE-
Q 020798 231 TG--KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQ-SRKVVQKLEGH-TDPVISVASHPTENIIASG- 305 (321)
Q Consensus 231 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~- 305 (321)
++ +....+..+.. . +..... .++.++++...|+..+||.+. .++....+..+ ...|..++++|++..|+..
T Consensus 350 ~~~~~~~~l~~~~~~-~--l~~~~~-~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 425 (741)
T 1yr2_A 350 GSTPRFDTVVPESKD-N--LESVGI-AGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSF 425 (741)
T ss_dssp SSSCEEEEEECCCSS-E--EEEEEE-EBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEE
T ss_pred CCccccEEEecCCCC-e--EEEEEE-ECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEE
Confidence 75 33333333322 1 221111 257788888889987777664 45556666543 5678899999998766633
Q ss_pred -eecCCccEEEcccc
Q 020798 306 -ALDNDRTVKIWTQE 319 (321)
Q Consensus 306 -~~d~~~~i~iw~~~ 319 (321)
+....++|++||++
T Consensus 426 ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 426 SSFTQPATVLALDPA 440 (741)
T ss_dssp EETTEEEEEEEEETT
T ss_pred cCCCCCCEEEEEECC
Confidence 33445789999875
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=1.5e-14 Score=120.07 Aligned_cols=248 Identities=8% Similarity=0.069 Sum_probs=161.8
Q ss_pred cccccCCcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC
Q 020798 5 QSLESFRPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD 84 (321)
Q Consensus 5 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~ 84 (321)
..++.+ .......+..+...+.+++|+|+|++++++..++.|.+|+.... ........+...+.+++++++
T Consensus 27 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~--------~~~~~~~~~~~~~~~i~~~~d 97 (333)
T 2dg1_A 27 SELQTI-TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK--------EIKRPFVSHKANPAAIKIHKD 97 (333)
T ss_dssp GGSCEE-ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC--------CEEEEEECSSSSEEEEEECTT
T ss_pred ccCccc-ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC--------cEEEEeeCCCCCcceEEECCC
Confidence 334444 23344456667777899999999998888888999999976431 111112234567999999999
Q ss_pred CCEEEEEeCC----CcEEEEecCCcceeeeee--cCcccEEEEEECCCCCEEEEeeC------CCcEEEEecCCCEEEEE
Q 020798 85 SRFLVSASDD----KTIRLWDVPTATCLKTLI--GHTNYVFCVNFNPQSNMIVSGAF------DETVRIWDVKTGKCLKV 152 (321)
Q Consensus 85 ~~~l~~~~~d----~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~~~~ 152 (321)
|+++++...+ +.|.+||..++.....+. .+...+..++++|+++.+++... .+.|..+|..+++....
T Consensus 98 g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 98 GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 9988777666 689999988776432222 23456889999999988776653 35677777665543332
Q ss_pred EeCCCCCeeEEEEccCCCEEE-EEeCCCeEEEEeCCC-Cceeee----ec-c-CCCCCeEEEEEccCCCEEEEEecCCeE
Q 020798 153 LPAHSDPVTAVDFNRDGTMIV-TSSYDGLCRIWDAST-GHCMKT----LI-D-DENPPVSFVKFSPNGKFILVGTLDNTL 224 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~d~~~-~~~~~~----~~-~-~~~~~~~~~~~~~~g~~l~~~~~d~~i 224 (321)
. .....+..++|+|+++.++ +...++.|.+||+.+ +..... .. . .....+..++++++|+++++...++.|
T Consensus 178 ~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v 256 (333)
T 2dg1_A 178 I-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRV 256 (333)
T ss_dssp E-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEE
T ss_pred e-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 2 2234578899999998654 445678999999863 322211 11 1 111346779999999988777778899
Q ss_pred EEEeCCCCcEEEEEeccCC------ceeEEEeEEEecCCeEEEEeCCC
Q 020798 225 RLWNYSTGKILKTYTGHTN------SKYCISSTFSVTNGKYIVSGSED 266 (321)
Q Consensus 225 ~i~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~d 266 (321)
.+||. +++.+..+..... ....+ .+ .+++..|+.++.+
T Consensus 257 ~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~--~~-~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 257 LVFNK-RGYPIGQILIPGRDEGHMLRSTHP--QF-IPGTNQLIICSND 300 (333)
T ss_dssp EEECT-TSCEEEEEECTTGGGTCSCBCCEE--EE-CTTSCEEEEEEEC
T ss_pred EEECC-CCCEEEEEEcCCCccccccCcceE--EE-CCCCCEEEEEeCc
Confidence 99998 5666666654321 22222 33 3676556554444
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=3e-15 Score=120.61 Aligned_cols=240 Identities=14% Similarity=0.150 Sum_probs=172.9
Q ss_pred CCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccccc-ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeee
Q 020798 33 HDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHE-QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL 111 (321)
Q Consensus 33 ~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 111 (321)
..+++|++++.++.|.+||..+ .+.+..+..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~t--------G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDT--------KEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTT--------TEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCC--------CeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 3568899999999999998633 23344555444 4678999999999888 45778999998 78877777
Q ss_pred ecC-cccEEEEEECCCCCEEEEeeC-CCcEEEEecCCCEEEEEEeCC------CCCeeEEEEccCCCEEEEEeCCCeEEE
Q 020798 112 IGH-TNYVFCVNFNPQSNMIVSGAF-DETVRIWDVKTGKCLKVLPAH------SDPVTAVDFNRDGTMIVTSSYDGLCRI 183 (321)
Q Consensus 112 ~~~-~~~v~~~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~~ 183 (321)
..+ ...+.++.+.|+|+.+++.+. ++.+..+|. +++.+..+... ......+++.++++++++...++.|..
T Consensus 72 ~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~ 150 (276)
T 3no2_A 72 AAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 150 (276)
T ss_dssp ECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE
T ss_pred cCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE
Confidence 654 346888999999999998877 778888885 56665555421 123445678899999999999999999
Q ss_pred EeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC---ceeEEEeEEEecCCeEE
Q 020798 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN---SKYCISSTFSVTNGKYI 260 (321)
Q Consensus 184 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l 260 (321)
||.. ++.+.++... .....+...++|+.++++..++.|..+|..+++.+..+..... ....+......++|..+
T Consensus 151 ~d~~-G~~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 151 IAPN-GQLLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp ECTT-SCEEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred ECCC-CCEEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE
Confidence 9998 8777666433 2344567789999998888888999999999999988864321 11223334445678877
Q ss_pred EEeCC--C------CeEEEEEc-ccceEEEEecCCC
Q 020798 261 VSGSE--D------SCVYLWEL-QSRKVVQKLEGHT 287 (321)
Q Consensus 261 ~~~~~--d------g~i~vwd~-~~~~~~~~~~~h~ 287 (321)
++... . +..+++++ .+++++..+..+.
T Consensus 228 v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 263 (276)
T 3no2_A 228 ICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKV 263 (276)
T ss_dssp EEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTT
T ss_pred EEeccCccccccccCCceEEEECCCCCEEEEecCcc
Confidence 76631 1 23466776 5677777776543
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.75 E-value=8.7e-16 Score=128.17 Aligned_cols=219 Identities=12% Similarity=0.163 Sum_probs=147.5
Q ss_pred ccEEEEEECCCCCEEEEEe---------CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC---C--cE
Q 020798 74 QGVSDLVFSSDSRFLVSAS---------DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD---E--TV 139 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g--~i 139 (321)
..+....+ +|++++... .++.|.+||+.+++. ..+ ..+..+.|+|||+.|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR-RFI----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce-EEc----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 34667777 888887542 256799999988764 233 457789999999998877643 2 48
Q ss_pred EEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCC---------------------------CeEEEEeCCCCcee
Q 020798 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYD---------------------------GLCRIWDASTGHCM 192 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~~~d~~~~~~~ 192 (321)
++||+.+++.......+ . +..++|+|+++.|+.++.+ ..|.+||+.+++..
T Consensus 88 ~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 88 WVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 88898888766554433 3 8999999999988877632 57889999887753
Q ss_pred eeeccCCCCCeEEEEEccCCCEEEEEecCC-------eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCC
Q 020798 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDN-------TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE 265 (321)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 265 (321)
..+.. . .+..+.|+|+| +++++..+. ...+|.+.+++. ..+..+ ... .. . .++|+.|+.++.
T Consensus 166 ~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~---~~-~-spdg~~l~~~~~ 234 (347)
T 2gop_A 166 EEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSF---YA-V-DSDGERILLYGK 234 (347)
T ss_dssp EEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESE---EE-E-EECSSCEEEEEC
T ss_pred eeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cce---ee-E-CCCCCEEEEEEc
Confidence 44433 2 56788999999 777765432 334444334443 333322 221 11 2 478887776654
Q ss_pred C--------CeEEEEEcccceEEEEecCCCCCeEE-EEecCCCceEEEEeecCCccEEEcccc
Q 020798 266 D--------SCVYLWELQSRKVVQKLEGHTDPVIS-VASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 266 d--------g~i~vwd~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+ ..|.+|| +++......+|...+.. +.|+ ++ ++++++. ++.++|| ..
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~--~~~~~l~-~~ 290 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFE--EGSVNLY-IW 290 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEE--TTEEEEE-EE
T ss_pred cccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEec--CCcEEEE-Ec
Confidence 3 3688888 55554444566778886 9999 88 7777764 4688998 64
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=7.7e-15 Score=121.54 Aligned_cols=266 Identities=11% Similarity=0.036 Sum_probs=173.2
Q ss_pred cCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEE
Q 020798 42 SADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCV 121 (321)
Q Consensus 42 ~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 121 (321)
+.++.|.++|............ ...-.........+.+. .++.+++...++.|.+||..+++.+..+. .......+
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~--~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i 89 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFY--RANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYI 89 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHH--HHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEE
T ss_pred CCCceEEEEECCCCEEhhhhHh--hhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEE
Confidence 4488999998754321100000 00000111335667774 35555666678899999999998877774 34567889
Q ss_pred EECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCC-----CCeeEEEEccCCCEEEEEe-CCCeEEEEeCCCCceeeee
Q 020798 122 NFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHS-----DPVTAVDFNRDGTMIVTSS-YDGLCRIWDASTGHCMKTL 195 (321)
Q Consensus 122 ~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~ 195 (321)
++++++..+++...++.|.+||..+++....++... .....+++ .++..+++.. .++.|.++|+.+++....+
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 998888544444488999999999998877776443 13456777 4444444443 4889999999988876665
Q ss_pred ccCCCCCeEEEEEccCCCEEEEEecC----------CeEEEEeCCCCcEEEEEeccCC-ceeEEEeEEEecCCeEEEEeC
Q 020798 196 IDDENPPVSFVKFSPNGKFILVGTLD----------NTLRLWNYSTGKILKTYTGHTN-SKYCISSTFSVTNGKYIVSGS 264 (321)
Q Consensus 196 ~~~~~~~~~~~~~~~~g~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 264 (321)
... .....++++|+|++++++..+ +.|.++|..+++....+....+ .... ....++++.|.++.
T Consensus 169 ~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~---la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 169 TIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSE---VQLNGTRDTLYWIN 243 (328)
T ss_dssp ECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEE---EEECTTSCEEEEES
T ss_pred EcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCcee---EEEecCCCEEEEEc
Confidence 432 234568899999977766554 7899999999988777653221 1222 23346777777665
Q ss_pred CCCeEEEEEcccceEEEE--ecCCCCCeEEEEecC-CCceEEEEee--cCCccEEEcccc
Q 020798 265 EDSCVYLWELQSRKVVQK--LEGHTDPVISVASHP-TENIIASGAL--DNDRTVKIWTQE 319 (321)
Q Consensus 265 ~dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~p-~~~~l~s~~~--d~~~~i~iw~~~ 319 (321)
. .|.+||..+++.... +..+.....+++++| ++.++++... -.++.|.+|+.+
T Consensus 244 ~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 244 N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred c--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 4 899999988775321 222235678999999 5666666510 135789999976
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.73 E-value=8.5e-14 Score=113.38 Aligned_cols=238 Identities=8% Similarity=0.067 Sum_probs=164.9
Q ss_pred ccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeee-eecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEE
Q 020798 72 HEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKT-LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCL 150 (321)
Q Consensus 72 h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 150 (321)
+...+.++++.++|+++++...++.|.+||.. ++.... .......+..++++++++.+++...++.|..||.......
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~ 91 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKE 91 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEE
Confidence 34578999999999977776667899999987 543221 1234567889999999988887777888999997632212
Q ss_pred EEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 151 KVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
..++.....+..+++.+++.++++...++.+..||. +++............+..++++++|+.+++...++.|..||.
T Consensus 92 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 222234557889999999988887777889999998 444333222223445788999999988777666789999998
Q ss_pred CCcEEEEEe-ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE-EecCCCCCeEEEEecCCCceEEEEeec
Q 020798 231 TGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ-KLEGHTDPVISVASHPTENIIASGALD 308 (321)
Q Consensus 231 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~~~d 308 (321)
+++...... ..... .......+++.++++...++.|.+||. +++... ....+...+.+++++++++++++..
T Consensus 170 ~g~~~~~~~~~~~~~---~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-- 243 (299)
T 2z2n_A 170 SGDITEFKIPTPASG---PVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW-- 243 (299)
T ss_dssp TCCEEEEECSSTTCC---EEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET--
T ss_pred CCcEEEeeCCCCCCc---ceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc--
Confidence 666544211 11122 222333467887777777889999998 555432 2333556789999999998777653
Q ss_pred CCccEEEccc
Q 020798 309 NDRTVKIWTQ 318 (321)
Q Consensus 309 ~~~~i~iw~~ 318 (321)
.++.|..|+.
T Consensus 244 ~~~~i~~~d~ 253 (299)
T 2z2n_A 244 GANKIGRLTS 253 (299)
T ss_dssp TTTEEEEEET
T ss_pred CCceEEEECC
Confidence 3467888875
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=7.8e-15 Score=121.49 Aligned_cols=252 Identities=13% Similarity=0.050 Sum_probs=168.3
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
....+++. ++++.++...++.|.++|.... +.+..+. .......++++++++.+++...++.|.+||..+
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~--------~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTF--------KEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTC--------CEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECccc--------EEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 45667774 4555566666789999987542 2223332 235678899988885545444789999999999
Q ss_pred cceeeeeecCc-----ccEEEEEECCCCCEEEEee--CCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC
Q 020798 105 ATCLKTLIGHT-----NYVFCVNFNPQSNMIVSGA--FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY 177 (321)
Q Consensus 105 ~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 177 (321)
++....+.... .....+++ +++.++.+. .++.|.++|+++++....++... ....++++|++++++++..
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCC
T ss_pred CeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECC
Confidence 88766554322 13445666 355555554 48899999999998887776533 4568899999987776655
Q ss_pred C----------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEE--EeccCCce
Q 020798 178 D----------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKT--YTGHTNSK 245 (321)
Q Consensus 178 d----------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~~ 245 (321)
+ +.|.++|..+++....+..........++++|+++.++++.. .|.+||..+++.... +.......
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p 269 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKY 269 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCE
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCce
Confidence 4 789999999887665554332335788999999999887654 899999988775321 11101122
Q ss_pred eEEEeEEEecCCeEEEEe----CCCCeEEEEEcccceEEEEecCCCCCeEEEEe
Q 020798 246 YCISSTFSVTNGKYIVSG----SEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~----~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 295 (321)
.. ..+.+.++..+++. ..++.|.+||.. ++.+..+..-..| ..++|
T Consensus 270 ~g--i~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P-~~~~~ 319 (328)
T 3dsm_A 270 YG--LTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIP-GAFCW 319 (328)
T ss_dssp EE--EEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESE-EEEEE
T ss_pred EE--EEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCc-ceEEE
Confidence 22 22332367777776 678999999998 8877776532222 44444
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.71 E-value=3e-13 Score=113.66 Aligned_cols=273 Identities=10% Similarity=-0.015 Sum_probs=173.0
Q ss_pred EECCCCCEEEEecC--Cc---eEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe----------CC
Q 020798 30 KFSHDGRLLASSSA--DK---TLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS----------DD 94 (321)
Q Consensus 30 ~~s~~g~~l~~~~~--d~---~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~----------~d 94 (321)
...|+++++++... .. .|.++|..... .+..+.....+ .++++|||++++.+. .+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~--------~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~ 96 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGS--------ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRT 96 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCe--------EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCC
Confidence 44578887777653 22 67888765422 22233322222 899999999998875 36
Q ss_pred CcEEEEecCCcceeeeeecC-------cccEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEE-EeCCCCCeeEEE
Q 020798 95 KTIRLWDVPTATCLKTLIGH-------TNYVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKV-LPAHSDPVTAVD 164 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~ 164 (321)
+.|.+||..+.+.+..+... ......+.++|||++|+.+.. ++.|.++| .+++.+.. ++... ++.
T Consensus 97 ~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~ 171 (373)
T 2mad_H 97 DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYH 171 (373)
T ss_pred CeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEE
Confidence 78999999888766654321 123457899999999988764 47899999 99988777 65322 234
Q ss_pred EccCC-CEEEEEeCCCeEEEEeCCCCceeeeec-----cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc--EEE
Q 020798 165 FNRDG-TMIVTSSYDGLCRIWDASTGHCMKTLI-----DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK--ILK 236 (321)
Q Consensus 165 ~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~--~~~ 236 (321)
+.|++ +.+++.+.||.+.++|. +++...... ....+......+.+++..++..+..+.+.+.|+.... .+.
T Consensus 172 ~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~ 250 (373)
T 2mad_H 172 IHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKA 250 (373)
T ss_pred EEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEee
Confidence 45554 45667778999999999 766553221 1111111234556665554444567899999986542 223
Q ss_pred EEeccCC-------ceeEEEeEEEecCCeEEEEeCC----------CCeEEEEEcccceEEEEecCCCCCeEEEEecCCC
Q 020798 237 TYTGHTN-------SKYCISSTFSVTNGKYIVSGSE----------DSCVYLWELQSRKVVQKLEGHTDPVISVASHPTE 299 (321)
Q Consensus 237 ~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~ 299 (321)
.+..... ...........+++..+..+.. .+.|.++|+.+++.+.++... ....+++|+|||
T Consensus 251 ~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg 329 (373)
T 2mad_H 251 PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDG 329 (373)
T ss_pred eeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCC
Confidence 2221100 0000111222456666555432 357999999999998888643 357999999999
Q ss_pred c-eEEEEeecCCccEEEccccc
Q 020798 300 N-IIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 300 ~-~l~s~~~d~~~~i~iw~~~~ 320 (321)
+ ++.++.. .++.|.++|.+.
T Consensus 330 ~~~l~v~~~-~~~~V~ViD~~t 350 (373)
T 2mad_H 330 GPDLYALSA-GTEVLHIYDAGA 350 (373)
T ss_pred CeEEEEEcC-CCCeEEEEECCC
Confidence 9 6666653 257899999753
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.68 E-value=9.9e-14 Score=113.95 Aligned_cols=237 Identities=11% Similarity=0.121 Sum_probs=158.0
Q ss_pred ccEEEEEECCCCCEEEE-------EeCCCcEEEEecCCcceeeeee----cCcccEEEEEECCC-CCEEEEeeCCCcEEE
Q 020798 74 QGVSDLVFSSDSRFLVS-------ASDDKTIRLWDVPTATCLKTLI----GHTNYVFCVNFNPQ-SNMIVSGAFDETVRI 141 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~-------~~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~ 141 (321)
....+++|+++++++++ +..++.|.+||..+++...... ++...+..++++++ ++.+++. ....|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEE
Confidence 45678999999987777 5778899999987776432211 24466889999999 6545544 3447899
Q ss_pred EecCCCEEEEE-EeC----CCCCeeEEEEccCCCEEEEEeCC---------------CeEEEEeCCCCceeeeeccCCCC
Q 020798 142 WDVKTGKCLKV-LPA----HSDPVTAVDFNRDGTMIVTSSYD---------------GLCRIWDASTGHCMKTLIDDENP 201 (321)
Q Consensus 142 wd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~~~d~~~~~~~~~~~~~~~~ 201 (321)
||.. ++.... ... ....+..+++.++++++++...+ +.+..+|.. ++..... . ...
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~-~~~ 172 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-T-AFQ 172 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-E-EES
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-c-CCC
Confidence 9988 654433 221 12347899999999887776654 567777765 4432221 1 122
Q ss_pred CeEEEEEc----cCCCEEEEE-ecCCeEEEEeCC-CCcE-----EEEEeccC-CceeEEEeEEEecCCeEEEEeCCCCeE
Q 020798 202 PVSFVKFS----PNGKFILVG-TLDNTLRLWNYS-TGKI-----LKTYTGHT-NSKYCISSTFSVTNGKYIVSGSEDSCV 269 (321)
Q Consensus 202 ~~~~~~~~----~~g~~l~~~-~~d~~i~i~d~~-~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~dg~i 269 (321)
....++++ |+|+.++++ ..++.|.+||+. +++. ...+..+. .. .......++|.++++...++.|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~---p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG---ADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE---EEEEEEBTTCCEEEEEETTTEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC---CCceEECCCCCEEEEEcCCCEE
Confidence 35678899 999766555 457899999976 4432 11222111 11 2223345678888877778899
Q ss_pred EEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 270 YLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 270 ~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+||..+++.+..+..+...+.+++++|+++.|..++. .++.|..|+.+
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~-~~~~l~~~~~~ 298 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH-ENNAVWKFEWQ 298 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET-TTTEEEEEECS
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC-CCCeEEEEeCC
Confidence 99998867766666666678999999999985554443 34678888765
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.68 E-value=2.4e-14 Score=131.46 Aligned_cols=244 Identities=15% Similarity=0.071 Sum_probs=152.5
Q ss_pred CCcccEEEEEECCCCCEEEEecCC-----ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 21 GHLRAISSVKFSHDGRLLASSSAD-----KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
+|...+..++|||||++||.++.+ ..|++|++.+... +. ...+...+..++|+|| +.|+.++.++
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--------~~-~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--------LA-DELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--------EE-EEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--------CC-ccCCCceeccEEEECC-CEEEEEEecC
Confidence 344578899999999999886543 4699998764321 11 1112222357899999 9888887665
Q ss_pred c--------------EEEEecCCcce----eeeeecCcccEEEEEECCCCCEEEEeeCC-----CcEEEEecCCCE-E-E
Q 020798 96 T--------------IRLWDVPTATC----LKTLIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIWDVKTGK-C-L 150 (321)
Q Consensus 96 ~--------------i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~-~-~ 150 (321)
. |++|++.++.. +.....+...+..+.|+|||++|+..+.+ ..|++||+.++. . .
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 4 88999877652 22222233457889999999988876644 389999998762 1 3
Q ss_pred EEEeCCCCCeeEEEEccCCCEEEEEeC----CCeEEEEeCCCC-ceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEE
Q 020798 151 KVLPAHSDPVTAVDFNRDGTMIVTSSY----DGLCRIWDASTG-HCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLR 225 (321)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~ 225 (321)
..+..+........ .|+++.|+..+. ++.|.+||+.++ .....+.......+..+.+. ++.++++...|+..+
T Consensus 310 ~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~ 387 (741)
T 1yr2_A 310 TALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQ 387 (741)
T ss_dssp EEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEE
T ss_pred EEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEE
Confidence 44444544444443 488888877765 345999998875 23344444444445566666 556677778888776
Q ss_pred EEeCC-CCcEEEEEeccCCceeEEEeEEEecCCeEEE----EeCCCCeEEEEEcccce
Q 020798 226 LWNYS-TGKILKTYTGHTNSKYCISSTFSVTNGKYIV----SGSEDSCVYLWELQSRK 278 (321)
Q Consensus 226 i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~dg~i~vwd~~~~~ 278 (321)
||.+. +++.+..+..+... .+......+++..++ +....+.|++||+.+++
T Consensus 388 l~~~~~~g~~~~~l~~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 388 VLAFDLDGKPAGAVSLPGIG--SASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEETTSCEEEECBCSSSC--EEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEeCCCCceeeccCCCCe--EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 66543 45555555432111 122222235665444 33456889999998765
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=2.5e-13 Score=115.73 Aligned_cols=239 Identities=10% Similarity=0.088 Sum_probs=158.1
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCC--cEEEEecCCCEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE--TVRIWDVKTGKCLK 151 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~wd~~~~~~~~ 151 (321)
.....|+|+++++++++...++.|++||..++........ ..... ++++|+++.|+++..++ .|.+++...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 3578899999999777777788999999988765443333 22333 89999999988887766 78888876554333
Q ss_pred EE----eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeee----eccCCCCC-eEEEEEccC-CCEEEEEecC
Q 020798 152 VL----PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT----LIDDENPP-VSFVKFSPN-GKFILVGTLD 221 (321)
Q Consensus 152 ~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~----~~~~~~~~-~~~~~~~~~-g~~l~~~~~d 221 (321)
.+ ......+..++++|++..|+.+..++.|+.||..++..... ........ ...++++|+ +.++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 33 21445678899999555555577788999999987653221 11111111 128999995 5555555567
Q ss_pred CeEEEEeCCCCcEEEEEeccC---C---------ceeEEEeEEEecCCeEEEEeC-CCCeEEEEEcccceEEEEecCC--
Q 020798 222 NTLRLWNYSTGKILKTYTGHT---N---------SKYCISSTFSVTNGKYIVSGS-EDSCVYLWELQSRKVVQKLEGH-- 286 (321)
Q Consensus 222 ~~i~i~d~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~h-- 286 (321)
+.|+.|+.... +..+.++. . ...........++|.++++-. .++.|+.|++.+++.. .+.++
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~ 365 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVD 365 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTT
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCC
Confidence 89999997543 33333321 0 001122233456788888878 8999999998777643 33333
Q ss_pred -------------CCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 287 -------------TDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 287 -------------~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
-....+++++|++.++++-. .+++|+.+++|
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~--~n~~Ir~i~~e 409 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEA--WGKAIRKYAVE 409 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES--TTCEEEEEEEC
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEEC--CCCeEEEEEeC
Confidence 23578999999988888765 45678877764
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.66 E-value=2.8e-12 Score=104.35 Aligned_cols=238 Identities=11% Similarity=0.119 Sum_probs=163.0
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceee-eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK-TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 151 (321)
...+.++++.++|+..++...++.|.+||.. ++... .+......+..++++++++.+++...++.|..||.. ++...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 3567899999999988877778999999987 54332 122233568899999999887777667889999987 54332
Q ss_pred -EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 152 -VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 152 -~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
..+.....+..+++.++++++++...++.+..+|.. ++............+..++++++|+++++...++.|..||.
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 222234668899999999888777778899999987 54432222223445788999999996666556788999998
Q ss_pred CCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE-EecCCCCCeEEEEecCCCceEEEEeecC
Q 020798 231 TGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ-KLEGHTDPVISVASHPTENIIASGALDN 309 (321)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~~~d~ 309 (321)
+++... +....... ........+++.++++....+.|.+|+. +++... .+..+...+.++++.++++++++.. .
T Consensus 175 ~g~~~~-~~~~~~~~-~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~--~ 249 (300)
T 2qc5_A 175 TGKLEE-YPLPTNAA-APVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW--G 249 (300)
T ss_dssp TCCEEE-EECSSTTC-CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET--T
T ss_pred CCcEEE-eeCCCCCC-CcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc--C
Confidence 555543 32211111 1222333457877777777788999998 444332 2334456789999999998777653 3
Q ss_pred CccEEEcccc
Q 020798 310 DRTVKIWTQE 319 (321)
Q Consensus 310 ~~~i~iw~~~ 319 (321)
++.|..|+.+
T Consensus 250 ~~~i~~~~~~ 259 (300)
T 2qc5_A 250 ANQIGRITND 259 (300)
T ss_dssp TTEEEEECTT
T ss_pred CCeEEEECCC
Confidence 4678887753
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.63 E-value=4.5e-13 Score=111.48 Aligned_cols=272 Identities=14% Similarity=0.135 Sum_probs=174.7
Q ss_pred EEECCCCCEEEEecC-----CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe----------C
Q 020798 29 VKFSHDGRLLASSSA-----DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS----------D 93 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~-----d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~----------~ 93 (321)
....|+++.+++... ++.|.+.|.... ..+..+..-..+ . ++++|||++++++. .
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--------~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~ 107 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--------RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGER 107 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--------EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC--------eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCC
Confidence 345799998887755 578888876532 223333322333 4 99999999887765 3
Q ss_pred CCcEEEEecCCcceeeeeecC-------cccEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEEEeCCCCCeeEEE
Q 020798 94 DKTIRLWDVPTATCLKTLIGH-------TNYVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDPVTAVD 164 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 164 (321)
++.|.+||..+.+....+... ......+.++|||++++.+.. ++.|.++|+.+++.+..++... . ...
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~ 184 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHI 184 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEE
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-cee
Confidence 678999999999887766321 123456899999999887763 6899999999999888886532 1 223
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCC-Cceeeee---ccCCCCCe-EEEEEc-cCCCEEEEEecCCeEEEEeCCCCc--EEE
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDAST-GHCMKTL---IDDENPPV-SFVKFS-PNGKFILVGTLDNTLRLWNYSTGK--ILK 236 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~---~~~~~~~~-~~~~~~-~~g~~l~~~~~d~~i~i~d~~~~~--~~~ 236 (321)
+....+.+++.+.||.+.+.++.. ++..... ......++ ....|. ++|++++ .+.++.+.++|+.+.. .+.
T Consensus 185 ~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 185 FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp EEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECC
T ss_pred ecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeec
Confidence 333445677888899888888865 4432211 11111111 123554 6786655 4558999999987654 332
Q ss_pred EEecc----------CCceeEEEeEEEecCCeEEEEeC----------CCCeEEEEEcccceEEEEecCCCCCeEEEEec
Q 020798 237 TYTGH----------TNSKYCISSTFSVTNGKYIVSGS----------EDSCVYLWELQSRKVVQKLEGHTDPVISVASH 296 (321)
Q Consensus 237 ~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 296 (321)
.+... ......+. . .+++..++... ....|.++|+.+++.+.++.. ..++.+++++
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a--~-~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs 339 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVA--Y-HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVS 339 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEE--E-ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEEC
T ss_pred ceeccccccccccccCCCcceee--E-CCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEEC
Confidence 22200 00001111 1 24555554432 125799999999999888764 2368899999
Q ss_pred CCCc-eEEEEeecCCccEEEcccc
Q 020798 297 PTEN-IIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 297 p~~~-~l~s~~~d~~~~i~iw~~~ 319 (321)
||++ +|.+... .++.|.++|.+
T Consensus 340 ~D~~~~ly~tn~-~~~~VsViD~~ 362 (386)
T 3sjl_D 340 QDEKPLLYALST-GDKTLYIHDAE 362 (386)
T ss_dssp SSSSCEEEEEET-TTTEEEEEETT
T ss_pred CCCCeEEEEEcC-CCCeEEEEECC
Confidence 9996 5555432 46789999875
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.63 E-value=2.7e-12 Score=109.35 Aligned_cols=239 Identities=10% Similarity=0.073 Sum_probs=153.3
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC--cEEEE
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK--TIRLW 100 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~--~i~iw 100 (321)
......++|+|+|+++++...++.|+.|+..... +..+........ ++|+++++.|+++..++ .|.++
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~---------~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~ 199 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK---------VTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVY 199 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTE---------EEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCE---------EEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEE
Confidence 3468899999999988888878999999875321 111111122234 89999999988887766 78888
Q ss_pred ecCCcceeeee----ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEE----EeCCCCCe--eEEEEccC-C
Q 020798 101 DVPTATCLKTL----IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKV----LPAHSDPV--TAVDFNRD-G 169 (321)
Q Consensus 101 d~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~----~~~~~~~v--~~~~~~~~-~ 169 (321)
+...+.....+ ......+.+++++|++..|+.+..++.|+.||..++..... ...+.... ..++|+|+ +
T Consensus 200 d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 200 MKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp EGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred EcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence 87655433332 11345577899999655666677788999999987653322 11222222 38999995 5
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeccCC--------------CCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcE
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLIDDE--------------NPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKI 234 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~ 234 (321)
.++++...++.|+.|+.... ...+.... -.....++++|+|+++++-. .++.|+.|++.++..
T Consensus 280 ~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 280 NFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 56666667889999987643 22221111 12367899999999777766 788999999877764
Q ss_pred EEEEeccCC------------ceeEEEeEEEecCCeEEEEeCCCCeEEEEEc
Q 020798 235 LKTYTGHTN------------SKYCISSTFSVTNGKYIVSGSEDSCVYLWEL 274 (321)
Q Consensus 235 ~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (321)
..+.++.. ...........+++.++++-..++.|+.+++
T Consensus 358 -~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 358 -STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp -EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred -EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 33333200 0011122233355777777777777776664
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.62 E-value=2.4e-14 Score=119.54 Aligned_cols=181 Identities=15% Similarity=0.134 Sum_probs=135.4
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCC---CCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNS---DSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~---~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
.++.+++++...++++|+.++.+ +|++...... ......+.... .+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~-v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAV-VGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEE-EEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCEEE-EEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 58899999999999999988655 5987654310 00011222222 3555 999999 89999988 889999999
Q ss_pred cCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeE
Q 020798 102 VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 181 (321)
+.+.........|...+..+.+.+. .++++..||.+.+||++++.... +...|++++|+|+| ++.+..||.+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 9877655556667777888777654 38888999999999999876543 34579999999999 6789999999
Q ss_pred EEEeCCCCce--eeeec-----c---CCCCCeEEEEEccCCCEEEEEe
Q 020798 182 RIWDASTGHC--MKTLI-----D---DENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 182 ~~~d~~~~~~--~~~~~-----~---~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
++|+....+. ...+. . .+...+..+.|.+++.++++-.
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9998877664 33331 1 2456799999999999888743
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=1.9e-12 Score=106.18 Aligned_cols=244 Identities=10% Similarity=0.120 Sum_probs=157.7
Q ss_pred cCCcccEEEEEECCCCCEEEE-------ecCCceEEEeeccccCCCCCCCCCccc--ccccccccEEEEEECCC-CCEEE
Q 020798 20 NGHLRAISSVKFSHDGRLLAS-------SSADKTLLTYSLSSISNSDSTPPSPLQ--KFTGHEQGVSDLVFSSD-SRFLV 89 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~g~~l~~-------~~~d~~v~~~~~~~~~~~~~~~~~~~~--~~~~h~~~i~~~~~~~~-~~~l~ 89 (321)
........+++|+++|+++++ +..++.|..|+...... .... ...++...+..++++++ +++++
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~------~~~~~~~~~~~~~~~~~i~~~~~~g~l~v 87 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK------TVICKPEVNGYGGIPAGCQCDRDANQLFV 87 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE------EEEECCEETTEECCEEEEEECSSSSEEEE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE------EEEEecccCCCCCCCceEEEecCCCcEEE
Confidence 334456789999999988877 66788899997543211 0000 01124467899999999 76555
Q ss_pred EEeCCCcEEEEecCCcceeee-eec----CcccEEEEEECCCCCEEEEeeCC---------------CcEEEEecCCCEE
Q 020798 90 SASDDKTIRLWDVPTATCLKT-LIG----HTNYVFCVNFNPQSNMIVSGAFD---------------ETVRIWDVKTGKC 149 (321)
Q Consensus 90 ~~~~d~~i~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~~wd~~~~~~ 149 (321)
+. ..+.|.+||.. ++.... ... ....+..++++++++.+++...+ +.|..||.. ++.
T Consensus 88 ~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 AD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE
T ss_pred EE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE
Confidence 44 44479999987 654322 111 12347889999999887776554 567777765 543
Q ss_pred EEEEeCCCCCeeEEEEc----cCCCEEEEE-eCCCeEEEEeCC-CCcee--eee--ccCCC-CCeEEEEEccCCCEEEEE
Q 020798 150 LKVLPAHSDPVTAVDFN----RDGTMIVTS-SYDGLCRIWDAS-TGHCM--KTL--IDDEN-PPVSFVKFSPNGKFILVG 218 (321)
Q Consensus 150 ~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~~~d~~-~~~~~--~~~--~~~~~-~~~~~~~~~~~g~~l~~~ 218 (321)
.... .+......++++ |+++.++.+ ..++.|.+||.. .+... ..+ ..... ..+..++++++|+++++.
T Consensus 165 ~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 165 IQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred EEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence 3322 223446788999 998765554 567899999976 33311 111 11111 346789999999988877
Q ss_pred ecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe-EEEEeCCCCeEEEEEccc
Q 020798 219 TLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 219 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~ 276 (321)
..++.|.+||..+++.+..+..+......+ .+ .++++ ++++...++.|..|++..
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i--~~-~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRCPFEKPSNL--HF-KPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEECSSSCEEEE--EE-CTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCEEEEEcCCCCcEeEEEeCCCCCceeE--EE-CCCCCEEEEEeCCCCeEEEEeCCC
Confidence 778899999988777666665443333222 23 56787 555566678899999864
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.60 E-value=2.7e-13 Score=114.71 Aligned_cols=268 Identities=13% Similarity=0.098 Sum_probs=172.8
Q ss_pred CCCCEEEEecCC-----ceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEe----------CCCcE
Q 020798 33 HDGRLLASSSAD-----KTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSAS----------DDKTI 97 (321)
Q Consensus 33 ~~g~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~----------~d~~i 97 (321)
|+++.+++.... +.|.++|.... +.+..+..-..+ .++++||+++++++. .++.|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--------~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~V 151 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--------RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYV 151 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--------EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEE
Confidence 566766655442 68888887542 223333322233 799999999888775 36789
Q ss_pred EEEecCCcceeeeeecC-------cccEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC
Q 020798 98 RLWDVPTATCLKTLIGH-------TNYVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
.++|..+.+.+..+.-- ......+.++||+++++.+.. ++.|.+.|+.+.+.+..++.... ....|+
T Consensus 152 sviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~ 227 (426)
T 3c75_H 152 EVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPA 227 (426)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEE
T ss_pred EEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccC
Confidence 99999999887765421 123346789999999988764 57899999999998888775321 223343
Q ss_pred C-CEEEEEeCCCeEEEEeCCCCceeee----eccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEE--EEEecc
Q 020798 169 G-TMIVTSSYDGLCRIWDASTGHCMKT----LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKIL--KTYTGH 241 (321)
Q Consensus 169 ~-~~l~~~~~dg~i~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~ 241 (321)
+ ..+++.+.||.+.+.+..+++.... +.....+....+.+.+++..++.....+.+.+.|....... ..+...
T Consensus 228 g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 228 SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence 3 4566677788877777755443321 11111111223567888888777778889999998655422 111100
Q ss_pred ---C-------CceeEEEeEEEecCCeEEEEeC----------CCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCc-
Q 020798 242 ---T-------NSKYCISSTFSVTNGKYIVSGS----------EDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTEN- 300 (321)
Q Consensus 242 ---~-------~~~~~~~~~~~~~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~- 300 (321)
. .....+ .+ .+++..+++.. .++.|.++|+.+.+.+.++.... ...+++|+||++
T Consensus 308 ~~~~i~~g~~p~g~~~v--a~-s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~ 383 (426)
T 3c75_H 308 TEAERADDWRPGGWQQT--AY-HRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEP 383 (426)
T ss_dssp CTTTGGGTEEECSSSCE--EE-EGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSC
T ss_pred cccccccccccCCceee--EE-cCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCE
Confidence 0 000011 22 35555444432 23579999999999998886432 468999999999
Q ss_pred eEEEEeecCCccEEEcccc
Q 020798 301 IIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 301 ~l~s~~~d~~~~i~iw~~~ 319 (321)
++.+... .++.|.++|.+
T Consensus 384 ~lyv~n~-~s~~VsVID~~ 401 (426)
T 3c75_H 384 LLYALSA-GTQTLHIYDAA 401 (426)
T ss_dssp EEEEEET-TTTEEEEEETT
T ss_pred EEEEEcC-CCCeEEEEECC
Confidence 7777654 35789999975
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=1.5e-11 Score=103.30 Aligned_cols=244 Identities=11% Similarity=-0.017 Sum_probs=156.3
Q ss_pred EEEECCCCCEEEEec----------CCceEEEeeccccCCCCCCCCC-cccccccccccEEEEEECCCCCEEEEEeC--C
Q 020798 28 SVKFSHDGRLLASSS----------ADKTLLTYSLSSISNSDSTPPS-PLQKFTGHEQGVSDLVFSSDSRFLVSASD--D 94 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~~~~~~l~~~~~--d 94 (321)
.++++|||++++++. .++.+.++|..........+.. ..... +......+.|+|||++|+++.. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~--~g~~p~~~~~spDG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFD--VGPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccc--cCCCccceEECCCCCEEEEEecCCC
Confidence 899999999998875 3678889987543211100000 00000 0123457999999999998864 4
Q ss_pred CcEEEEecCCcceeee-eecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEEEe-----CCCCCe-eEEEEc
Q 020798 95 KTIRLWDVPTATCLKT-LIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKVLP-----AHSDPV-TAVDFN 166 (321)
Q Consensus 95 ~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~-----~~~~~v-~~~~~~ 166 (321)
+.|.++| .+++.... +.. .. ++.+.|++ +.+++.+.||.+.++|. +++...... ....++ ....+.
T Consensus 148 ~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 7899999 99887666 432 11 23445554 45666778999999999 776553321 112222 234566
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCc--eeeeecc--C-------CCCCeEEEEEccCCCEEEEEec----------CCeEE
Q 020798 167 RDGTMIVTSSYDGLCRIWDASTGH--CMKTLID--D-------ENPPVSFVKFSPNGKFILVGTL----------DNTLR 225 (321)
Q Consensus 167 ~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~--~-------~~~~~~~~~~~~~g~~l~~~~~----------d~~i~ 225 (321)
+++..++..+..+.+.+.|..+.. ....+.. . .......+.++|+++.++++.. ++.|.
T Consensus 222 ~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 222 NKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred ecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 666655555578899999986542 1121110 0 0112334789999988877653 35799
Q ss_pred EEeCCCCcEEEEEeccCCceeEEEeEEEecCCe-EEEEeC-CCCeEEEEEcccceEEEEe
Q 020798 226 LWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGS-EDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 226 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~~~~~~~~~ 283 (321)
++|+.+++.+..+..... ...+ ...+||+ .++++. .++.|.++|+.+++.+..+
T Consensus 302 VID~~t~~vv~~i~~g~~-p~~i---~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 302 SVTGLVGQTSSQISLGHD-VDAI---SVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEECCCCEEEEEEECCCC-cCeE---EECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 999999999888864332 2223 2346787 777776 5899999999999988773
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.60 E-value=4.1e-12 Score=103.59 Aligned_cols=221 Identities=13% Similarity=0.108 Sum_probs=145.9
Q ss_pred EEEEEECCC-CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe
Q 020798 76 VSDLVFSSD-SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 76 i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 154 (321)
.....|+++ +.++++...++.|..||..+++. ..+ .....+.+++++++++++++ . +..|.+||..+++......
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEe
Confidence 456789885 45566667788999999987764 222 34567889999999995554 3 5679999998877544332
Q ss_pred CC----CCCeeEEEEccCCCEEEEEeC-----------CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE-
Q 020798 155 AH----SDPVTAVDFNRDGTMIVTSSY-----------DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG- 218 (321)
Q Consensus 155 ~~----~~~v~~~~~~~~~~~l~~~~~-----------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~- 218 (321)
.. ...+..+++.|+|+++++... .+.+..++.. ++.. .+.. .......++|+|+++.++.+
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~-~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFD-QVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEE-EESBEEEEEECTTSCEEEEEE
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEee-ccccccceEEcCCCCEEEEec
Confidence 21 234678999999997665432 2344444443 2222 2211 12235789999999877554
Q ss_pred ecCCeEEEEeC--CCCcEE--EEE---eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeE
Q 020798 219 TLDNTLRLWNY--STGKIL--KTY---TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVI 291 (321)
Q Consensus 219 ~~d~~i~i~d~--~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~ 291 (321)
+.++.|.+||+ .++... +.+ ...... .......++|.+.++....+.|..||..+++.+..+..+...++
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~---p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI---PDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCE---EEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCC---CCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce
Confidence 45788999987 455432 112 111121 22233446788777777788899999988998888887777899
Q ss_pred EEEec-CCCceEEEEe
Q 020798 292 SVASH-PTENIIASGA 306 (321)
Q Consensus 292 ~~~~~-p~~~~l~s~~ 306 (321)
+++|. |+++.|..++
T Consensus 245 ~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 245 SCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEESGGGCEEEEEE
T ss_pred EEEEeCCCCCEEEEEc
Confidence 99998 8876554443
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.59 E-value=2.8e-12 Score=106.75 Aligned_cols=254 Identities=12% Similarity=0.095 Sum_probs=160.5
Q ss_pred EEEECCCCCEEEEec----------CCceEEEeeccccCCCCCCCCCcccccccc-------cccEEEEEECCCCCEEEE
Q 020798 28 SVKFSHDGRLLASSS----------ADKTLLTYSLSSISNSDSTPPSPLQKFTGH-------EQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~i~~~~~~~~~~~l~~ 90 (321)
.++++|||++++++. .++.|.+||..... .+..+.-. ......+.|+|||+++++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--------v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyV 153 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--------PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLF 153 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--------EEEEEECCCccccccCCCCceEEEcCCCCEEEE
Confidence 399999999988775 35779999875432 22222110 123456899999999988
Q ss_pred EeC--CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC-CEEEEEEeCC----CCCee-E
Q 020798 91 ASD--DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT-GKCLKVLPAH----SDPVT-A 162 (321)
Q Consensus 91 ~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~----~~~v~-~ 162 (321)
+.. ++.|.++|+.+++.+..+..... ...+....+.+++.+.||.+.+.++.+ ++.......+ ..++. .
T Consensus 154 an~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~ 230 (386)
T 3sjl_D 154 YQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINH 230 (386)
T ss_dssp EECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSC
T ss_pred EEcCCCCeEEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccc
Confidence 764 68999999999998777643221 122222345666777888888888865 4432211111 12222 2
Q ss_pred EEEc-cCCCEEEEEeCCCeEEEEeCCCCc--eeeeec--c------C-CCCCeEEEEEccCCCEEEEEec----------
Q 020798 163 VDFN-RDGTMIVTSSYDGLCRIWDASTGH--CMKTLI--D------D-ENPPVSFVKFSPNGKFILVGTL---------- 220 (321)
Q Consensus 163 ~~~~-~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~--~------~-~~~~~~~~~~~~~g~~l~~~~~---------- 220 (321)
.+|. ++|++ +..+.+|.+++.|..+.. ....+. . . .......++++++++.+++...
T Consensus 231 ~~~~~~dG~~-~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 231 PAYSQKAGRL-VWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp CEEETTTTEE-EEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred ceeEcCCCcE-EEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 3554 56654 446678999999997653 222221 0 0 0112234778999988887653
Q ss_pred CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe-EEEE-eCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCC
Q 020798 221 DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVS-GSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPT 298 (321)
Q Consensus 221 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~-~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~ 298 (321)
.+.|.++|+.+++.+..+.... ..+. +...+|++ +|++ ...++.|.++|..+++.++.+.....+ +.+.+++|
T Consensus 310 ~~~V~viD~~t~kv~~~i~vg~-~~~~---lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p-~~l~~s~d 384 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKFEMGH-EIDS---INVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG-PQVITTAD 384 (386)
T ss_dssp EEEEEEEETTTCCEEEEEEEEE-EECE---EEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS-CCEEEECC
T ss_pred CCEEEEEECCCCeEEEEEECCC-Ccce---EEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCC-ceeEECCc
Confidence 2579999999999998876432 1222 23346765 5555 556899999999999999888754333 45555554
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.58 E-value=3.7e-12 Score=104.29 Aligned_cols=226 Identities=10% Similarity=0.111 Sum_probs=146.5
Q ss_pred ccccccccEEEEEECCCCC-EEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC
Q 020798 68 KFTGHEQGVSDLVFSSDSR-FLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT 146 (321)
Q Consensus 68 ~~~~h~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 146 (321)
.+.....-.....|+++++ ++++...++.|..|+. +++ ...+..+...+..++++++|+.+++...++.|.+|+..
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 3333445567889999998 5667777889999987 443 34444556678899999999877666666789999975
Q ss_pred CEEEEEEeC----CCCCeeEEEEccCCCEEEE----EeC-------------CCeEEEEeCCCCceeeeeccCCCCCeEE
Q 020798 147 GKCLKVLPA----HSDPVTAVDFNRDGTMIVT----SSY-------------DGLCRIWDASTGHCMKTLIDDENPPVSF 205 (321)
Q Consensus 147 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 205 (321)
++....... ....+..+++.|+|+++++ +.. .+.|..+|..+++..... .......
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p~g 192 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHPNG 192 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCCCcc
Confidence 543222111 1134678999999998776 321 256777887666543322 1234577
Q ss_pred EEEccCCCEEEEEecC------CeEEEEeCCCCcEE--EEEec-cCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 206 VKFSPNGKFILVGTLD------NTLRLWNYSTGKIL--KTYTG-HTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~d------~~i~i~d~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
++|+|+++.|+++... +.|.+|++..+.+. ..+.. ..... ......++|.+. +++.+ .|.+|+. .
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p---dgi~~d~~G~lw-v~~~~-gv~~~~~-~ 266 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP---DGFCVDRGGWLW-SSSGT-GVCVFDS-D 266 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC---CSEEECTTSCEE-ECCSS-EEEEECT-T
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC---CeEEECCCCCEE-EecCC-cEEEECC-C
Confidence 9999999988777665 68999998755411 11111 11111 112334677744 44444 4999997 4
Q ss_pred ceEEEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 277 RKVVQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 277 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
++.+..+..+. .+.+++|+|+++.|..++
T Consensus 267 g~~~~~~~~~~-~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 267 GQLLGHIPTPG-TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp SCEEEEEECSS-CCCEEEECTTSCEEEEEE
T ss_pred CCEEEEEECCC-ceeEEEEeCCCCEEEEEc
Confidence 66666666554 588999999987776665
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=1.8e-12 Score=108.03 Aligned_cols=262 Identities=12% Similarity=0.079 Sum_probs=161.1
Q ss_pred ccEEEEEECCCCCEEEEecC--CceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-----CCc
Q 020798 24 RAISSVKFSHDGRLLASSSA--DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-----DKT 96 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~--d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-----d~~ 96 (321)
..+..++++|+|+++++... ++.+.+|.+..... ...+. .......|...+..++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~-~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPP-QSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCC-CCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCC-cccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 67889999999999888632 33244454421100 00000 00112245678999999999986665433 578
Q ss_pred EEEEecCCcceeeeeec------CcccEEEEEECCCCCEE-EEee---CCCcEEEEecCCCEEEEEEeCCCCCee-EEEE
Q 020798 97 IRLWDVPTATCLKTLIG------HTNYVFCVNFNPQSNMI-VSGA---FDETVRIWDVKTGKCLKVLPAHSDPVT-AVDF 165 (321)
Q Consensus 97 i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l-~~~~---~dg~i~~wd~~~~~~~~~~~~~~~~v~-~~~~ 165 (321)
|.+||+.+++.+..+.. +...+..+++++++..+ ++.. .++.|.+||+.+++....+..|..... ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 99999998876555432 22346788999865554 5444 578999999988876665544322110 1344
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC-eEEEEeCC---CCc--------
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN-TLRLWNYS---TGK-------- 233 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~-~i~i~d~~---~~~-------- 233 (321)
.+++..+.+.+.++.++.|. ..+..++++|+|+.|+.+..++ .+..++.. .+.
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp EETTEECBEECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred eECCEEEEeccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 55666666666777665442 1356799999999888877665 55555431 110
Q ss_pred EEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC-CCCCeEEEEecCCCceEEEEe
Q 020798 234 ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG-HTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~ 306 (321)
.+... ++...... ....++|.++++...++.|.+||..+++....... +.....++++.+++.++++.+
T Consensus 240 ~~~~~-g~~g~pdg---ia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 240 KIERY-SEKPICDG---ISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp TCEEE-EECCSCSC---EEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred ceEec-ccCCCCce---EEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 00111 11111111 22346788888888899999999855554322222 245679999999998888875
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=8.7e-11 Score=95.70 Aligned_cols=226 Identities=12% Similarity=0.084 Sum_probs=142.4
Q ss_pred cCCcccEEEEEECCC-CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEE
Q 020798 20 NGHLRAISSVKFSHD-GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIR 98 (321)
Q Consensus 20 ~~h~~~v~~~~~s~~-g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~ 98 (321)
..+..--....|+|+ +.++++...++.|..|+..... ...+ .....+.+++++++|+++++ . ++.|.
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~ 76 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---------VQRV-TMDAPVSSVALRQSGGYVAT-I-GTKFC 76 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---------EEEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---------EEEE-eCCCceEEEEECCCCCEEEE-E-CCeEE
Confidence 334445567899995 4566677778899999865321 1111 23457899999999995554 4 56799
Q ss_pred EEecCCcceeeeeec----CcccEEEEEECCCCCEEEEeeC-----------CCcEEEEecCCCEEEEEEeCCCCCeeEE
Q 020798 99 LWDVPTATCLKTLIG----HTNYVFCVNFNPQSNMIVSGAF-----------DETVRIWDVKTGKCLKVLPAHSDPVTAV 163 (321)
Q Consensus 99 iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 163 (321)
+||..+++....... ....+..++++|+|+++++... .+.|+.++.. ++... +.........+
T Consensus 77 ~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi 154 (297)
T 3g4e_A 77 ALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGL 154 (297)
T ss_dssp EEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEE
T ss_pred EEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-Eeeccccccce
Confidence 999987764322211 1245788999999997665432 2344444433 33222 22223345789
Q ss_pred EEccCCCEEE-EEeCCCeEEEEeC--CCCcee--eeec--cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEE
Q 020798 164 DFNRDGTMIV-TSSYDGLCRIWDA--STGHCM--KTLI--DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILK 236 (321)
Q Consensus 164 ~~~~~~~~l~-~~~~dg~i~~~d~--~~~~~~--~~~~--~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~ 236 (321)
+|+|+++.++ +.+.++.|..||+ .++... +.+. .........++++++|++.++....+.|..||..+++.+.
T Consensus 155 ~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred EEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 9999998665 4556789999986 444321 1111 1112346789999999877777777889999998899888
Q ss_pred EEeccCCceeEEEeEEEecCCeEEE
Q 020798 237 TYTGHTNSKYCISSTFSVTNGKYIV 261 (321)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~l~ 261 (321)
.+..+.....+ +.|..++++.|.
T Consensus 235 ~i~~p~~~~t~--~~f~g~d~~~L~ 257 (297)
T 3g4e_A 235 TVKLPVDKTTS--CCFGGKNYSEMY 257 (297)
T ss_dssp EEECSSSBEEE--EEEESGGGCEEE
T ss_pred EEECCCCCceE--EEEeCCCCCEEE
Confidence 88765433322 334435554443
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=8.8e-13 Score=110.13 Aligned_cols=174 Identities=12% Similarity=0.130 Sum_probs=126.5
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcc---------eee-eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEec
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT---------CLK-TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV 144 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~ 144 (321)
.++.+++++...++++|+.++ +.+|++...+ ... ....+.. |..++| +++.|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 578899999999999999875 6679864332 111 2234566 999999 88999988 8899999999
Q ss_pred CCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeE
Q 020798 145 KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTL 224 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i 224 (321)
++.......+.+..++.++.+.+. .+++++.||.+.+||+.++.... ....+.+++|+|+| ++.|..||.+
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 876555556677778888777654 38889999999999998776543 23468999999999 6788999999
Q ss_pred EEEeCCCCcE--EEEEec----c--CCceeEEEeEEEecCCeEEEE
Q 020798 225 RLWNYSTGKI--LKTYTG----H--TNSKYCISSTFSVTNGKYIVS 262 (321)
Q Consensus 225 ~i~d~~~~~~--~~~~~~----~--~~~~~~~~~~~~~~~~~~l~~ 262 (321)
++|+....+. .+.+.. + ......+....+..++.++++
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9998877664 555521 1 011123333444467777775
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.51 E-value=8.2e-12 Score=113.75 Aligned_cols=239 Identities=14% Similarity=0.145 Sum_probs=148.2
Q ss_pred cccccEEEEEECCCCCEEEEEe-----CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCC--------
Q 020798 71 GHEQGVSDLVFSSDSRFLVSAS-----DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDE-------- 137 (321)
Q Consensus 71 ~h~~~i~~~~~~~~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------- 137 (321)
+|...+..++|||||++|+.+. ....|++||+.+++.+.... +......++|+ |++.|+.+..+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 3555788899999999888432 23469999999988544311 11112467899 999888887764
Q ss_pred -----cEEEEecCCCE----EEEEEeC-CCCCeeEEEEccCCCEEEEEeC----CCeEEEEeCCCCc-eeeeeccCCCCC
Q 020798 138 -----TVRIWDVKTGK----CLKVLPA-HSDPVTAVDFNRDGTMIVTSSY----DGLCRIWDASTGH-CMKTLIDDENPP 202 (321)
Q Consensus 138 -----~i~~wd~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~-~~~~~~~~~~~~ 202 (321)
.|++|++.++. .+...+. +......+.|+|+++.++.... .+.++++|+.++. ....+.... ..
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~-~~ 282 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL-DA 282 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS-SS
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC-Cc
Confidence 39999987653 2222223 3445678999999997755432 3589999997663 233333222 22
Q ss_pred eEEEEEccCCCEEEEEe-cC---CeEEEEeCCCCcE--EEEEeccCCceeEEEeEEEecCCeEEEEe-CCCC--eEEEEE
Q 020798 203 VSFVKFSPNGKFILVGT-LD---NTLRLWNYSTGKI--LKTYTGHTNSKYCISSTFSVTNGKYIVSG-SEDS--CVYLWE 273 (321)
Q Consensus 203 ~~~~~~~~~g~~l~~~~-~d---~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg--~i~vwd 273 (321)
.... ++++|..|+..+ .+ +.|..+|+.++.. ...+..+.... + .+. ++++.|+.. ..++ .|++|+
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~--~~s-~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV--L--TVH-SGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC--E--EEE-EETTEEEEEEEETTEEEEEEEC
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE--E--EEE-EECCEEEEEEEECCeeEEEEEE
Confidence 3333 566666655444 33 5799999887643 23444443332 2 333 345555544 4454 688899
Q ss_pred cccceEEEEecC-CCCCeEEEEecCCCceEEEEee--cCCccEEEcccc
Q 020798 274 LQSRKVVQKLEG-HTDPVISVASHPTENIIASGAL--DNDRTVKIWTQE 319 (321)
Q Consensus 274 ~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~~~--d~~~~i~iw~~~ 319 (321)
+..+. ...+.. ....+..+.++|++..|+.... ...+.|..||++
T Consensus 357 ~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 357 YEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp TTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 87543 344432 3456778888999877665532 234678888864
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.51 E-value=1.5e-11 Score=100.57 Aligned_cols=228 Identities=10% Similarity=0.071 Sum_probs=146.1
Q ss_pred ccCCcccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcE
Q 020798 19 LNGHLRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 19 ~~~h~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
+..+......++|+|+|+ ++++...++.+..|+... ....+..+...+..++++++|+++++...++.|
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----------~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v 109 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----------TVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAI 109 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----------CEEEEEESCSCEEEEEECTTSCEEEEETTTTEE
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----------CEEEEeCCCCccceeeECCCCCEEEEECCCCEE
Confidence 333445667899999998 667777788898886521 123344455678999999999977666566789
Q ss_pred EEEecCCcceeeeeecC-----cccEEEEEECCCCCEEEE----eeC-------------CCcEEEEecCCCEEEEEEeC
Q 020798 98 RLWDVPTATCLKTLIGH-----TNYVFCVNFNPQSNMIVS----GAF-------------DETVRIWDVKTGKCLKVLPA 155 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~~wd~~~~~~~~~~~~ 155 (321)
.+|+.. ++. ..+..+ ...+..++++|+|+.+++ +.. .+.|+.+|..+++.....
T Consensus 110 ~~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-- 185 (305)
T 3dr2_A 110 TRSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-- 185 (305)
T ss_dssp EEECTT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--
T ss_pred EEECCC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--
Confidence 999976 442 222111 123567899999998886 332 256788887666543332
Q ss_pred CCCCeeEEEEccCCCEEEEEeCC------CeEEEEeCCCCcee--eeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 156 HSDPVTAVDFNRDGTMIVTSSYD------GLCRIWDASTGHCM--KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 156 ~~~~v~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
.......++|+|+++.|+.+... +.|..|++...... ..+..........++++++|++. ++..+ .|.+|
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~ 263 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVF 263 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEE
Confidence 33456789999999977776654 78999998654311 11111112234568899999954 44444 59999
Q ss_pred eCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC
Q 020798 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267 (321)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 267 (321)
+. +++.+..+..... . ....+. ++++.|..++.++
T Consensus 264 ~~-~g~~~~~~~~~~~-~--~~~~f~-~d~~~L~it~~~~ 298 (305)
T 3dr2_A 264 DS-DGQLLGHIPTPGT-A--SNCTFD-QAQQRLFITGGPC 298 (305)
T ss_dssp CT-TSCEEEEEECSSC-C--CEEEEC-TTSCEEEEEETTE
T ss_pred CC-CCCEEEEEECCCc-e--eEEEEe-CCCCEEEEEcCCe
Confidence 97 5777777765442 2 223344 6776666666554
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.51 E-value=6.6e-11 Score=97.76 Aligned_cols=219 Identities=12% Similarity=0.057 Sum_probs=142.7
Q ss_pred EEEEEECCCC-CEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe
Q 020798 76 VSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 76 i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 154 (321)
.....|+|++ .++++...++.|..||..+++.. .+. ....+.+++++|+++++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 4567899974 45566667889999999877542 222 34578899999998877654 33 49999988776543322
Q ss_pred CC----CCCeeEEEEccCCCEEEEEeC------CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCe
Q 020798 155 AH----SDPVTAVDFNRDGTMIVTSSY------DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNT 223 (321)
Q Consensus 155 ~~----~~~v~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~ 223 (321)
.. ...+..++++|+|+++++... .+.+..++ +++.. .+.. .......++|+|+|+.++.+. .++.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~-~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFA-DISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEE-EESSEEEEEECTTSCEEEEEETTTCE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeC-CCcccCCeEEcCCCCEEEEEECCCCE
Confidence 11 134788999999987665442 24566666 34332 2211 122456889999998776554 5689
Q ss_pred EEEEeCC--CC-cE-----EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEe
Q 020798 224 LRLWNYS--TG-KI-----LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295 (321)
Q Consensus 224 i~i~d~~--~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 295 (321)
|.+||+. ++ +. ...+...... .......++|.++++...++.|.+||. +++.+..+..+...+.+++|
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~---p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGG---MDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSE---EEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCC---CCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence 9999985 55 31 2222111111 223334467877776666788999998 56777777777777999999
Q ss_pred c-CCCceEEEEe
Q 020798 296 H-PTENIIASGA 306 (321)
Q Consensus 296 ~-p~~~~l~s~~ 306 (321)
+ |+++.|..++
T Consensus 279 ~g~d~~~L~vt~ 290 (326)
T 2ghs_A 279 IGPDASRLLVTS 290 (326)
T ss_dssp ESTTSCEEEEEE
T ss_pred ecCCCCEEEEEe
Confidence 8 8877664443
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.50 E-value=6.1e-12 Score=114.59 Aligned_cols=241 Identities=15% Similarity=0.166 Sum_probs=146.8
Q ss_pred CCcccEEEEEECCCCCEEEE-----ecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCC
Q 020798 21 GHLRAISSVKFSHDGRLLAS-----SSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 21 ~h~~~v~~~~~s~~g~~l~~-----~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~ 95 (321)
+|...+..++|||||++||. |+....|+++|+.+.. .+. ...+......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--------~~~-~~~~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--------PLE-TPLKDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--------EEE-EEEEEEESCCCEEE-TTTEEEEEESSC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--------CCc-cccCCceeccEEEe-CCCEEEEEEecC
Confidence 46667889999999999984 4444688999886432 111 11111112567899 999998888774
Q ss_pred -------------cEEEEecCCcce----eeeeec-CcccEEEEEECCCCCEEEEee----CCCcEEEEecCCCE-EEEE
Q 020798 96 -------------TIRLWDVPTATC----LKTLIG-HTNYVFCVNFNPQSNMIVSGA----FDETVRIWDVKTGK-CLKV 152 (321)
Q Consensus 96 -------------~i~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~----~dg~i~~wd~~~~~-~~~~ 152 (321)
.|++|++.+... +..... |......+.++||+++|+... ....|+++|+.++. ....
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 399999877642 222222 344577889999999875432 23589999987653 3344
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEe-C---CCeEEEEeCCCCce--eeeeccCCCCCeEEEEEccCCCEEEEEecC-C--e
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSS-Y---DGLCRIWDASTGHC--MKTLIDDENPPVSFVKFSPNGKFILVGTLD-N--T 223 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~-~---dg~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d-~--~ 223 (321)
+..+....... +++++..|+..+ . .+.|..+|+.++.. ...+... ...+. .|+++++.|+....+ + .
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~--~~s~~g~~lv~~~~~~g~~~ 351 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE-RQQVL--TVHSGSGYLFAEYMVDATAR 351 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSSCE--EEEEETTEEEEEEEETTEEE
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-CCCEE--EEEEECCEEEEEEEECCeeE
Confidence 55555555444 566666555443 3 35789999987643 2333333 23333 889999888776654 3 6
Q ss_pred EEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeC----CCCeEEEEEcccce
Q 020798 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGS----EDSCVYLWELQSRK 278 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~dg~i~vwd~~~~~ 278 (321)
|++||+..+ ....+...... . +......+++..++... ..+.|..||+.+++
T Consensus 352 l~~~d~~g~-~~~~l~~p~~~-~-~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 352 VEQFDYEGK-RVREVALPGLG-S-VSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEECTTSC-EEEEECCSSSS-E-EEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEECCCC-eeEEeecCCCc-e-EEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 899998744 44444322111 1 21111223454444332 23789999987664
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.50 E-value=2.5e-11 Score=102.75 Aligned_cols=240 Identities=11% Similarity=0.065 Sum_probs=156.8
Q ss_pred EEEECCCCCEEEEec----------CCceEEEeeccccCCCCCCCCCccccccc-------ccccEEEEEECCCCCEEEE
Q 020798 28 SVKFSHDGRLLASSS----------ADKTLLTYSLSSISNSDSTPPSPLQKFTG-------HEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~-------h~~~i~~~~~~~~~~~l~~ 90 (321)
.++++|||++|+++. .++.|.++|..... .+..+.- .......+.++|||+++++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV 193 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--------PIADIELPDAPRFLVGTYQWMNALTPDNKNLLF 193 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--------EEEEEECCCccccccCCCcceEEEcCCCCEEEE
Confidence 789999999988876 36788898875432 1222110 0123456899999999998
Q ss_pred EeC--CCcEEEEecCCcceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCCCEEEEE----EeCCCCCe-eE
Q 020798 91 ASD--DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKTGKCLKV----LPAHSDPV-TA 162 (321)
Q Consensus 91 ~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~----~~~~~~~v-~~ 162 (321)
+.. ++.|.+.|+.+.+.+..+..-.. ....|++ ..+++.+.||.+.+.+..+++.... +.....++ ..
T Consensus 194 ~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~ 269 (426)
T 3c75_H 194 YQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINH 269 (426)
T ss_dssp EECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSC
T ss_pred EecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeE
Confidence 764 57899999999988776653221 2233433 4556666778877777755543321 22122222 23
Q ss_pred EEEccCCCEEEEEeCCCeEEEEeCCCCcee--eeeccC--C-------CCCeEEEEEccCCCEEEEEec----------C
Q 020798 163 VDFNRDGTMIVTSSYDGLCRIWDASTGHCM--KTLIDD--E-------NPPVSFVKFSPNGKFILVGTL----------D 221 (321)
Q Consensus 163 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~--~~~~~~--~-------~~~~~~~~~~~~g~~l~~~~~----------d 221 (321)
+.+.+++..++..+..+.+.+.|....... ..+... . ......++++|+++.+++... +
T Consensus 270 ~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 270 PAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp CEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 567888888877788899999998654321 111000 0 011123689999888777643 3
Q ss_pred CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe-EEEEeC-CCCeEEEEEcccceEEEEe
Q 020798 222 NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGS-EDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 222 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~~~~~~~~~ 283 (321)
+.|.++|+.+.+.+..+..... ...+ ...+|++ ++++.. .++.|.|+|+.+.+.++++
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~~-P~gi---a~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGHE-IDSI---NVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEEE-ECEE---EECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCC-cCeE---EEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 5799999999999988864321 2222 2346787 777776 6999999999999999887
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.44 E-value=4.7e-14 Score=118.63 Aligned_cols=204 Identities=15% Similarity=0.109 Sum_probs=115.9
Q ss_pred CCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCC-Cee-
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSD-PVT- 161 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-~v~- 161 (321)
++..+++++.|+.|..||..+++.+..+.. ..+.+..+..++..+++++.|+.|+.||.++++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567889999999999999999988776654 3344444456677788888999999999988876544432211 010
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 162 AVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
+..+. .+..+++++.++.++.||.++++....+.... ...++|++..+++++.++.|+.||.++++.+..+...
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 00111 34567788889999999999988765443221 2345668888999999999999999998866554321
Q ss_pred CCceeEEEeEEEecCC---eEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEE-EEecCCCce
Q 020798 242 TNSKYCISSTFSVTNG---KYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVIS-VASHPTENI 301 (321)
Q Consensus 242 ~~~~~~~~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~-~~~~p~~~~ 301 (321)
... ......+. ..+++++.||.|+.||..+++.+.+... ..++.. ..+++++..
T Consensus 160 ~~~-----~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 160 DYA-----ASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLR 217 (369)
T ss_dssp EEC-----CBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCE
T ss_pred ccc-----CccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceE
Confidence 100 00111111 4566788899999999999998887763 445544 456666653
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.43 E-value=2e-10 Score=104.19 Aligned_cols=257 Identities=11% Similarity=0.117 Sum_probs=159.2
Q ss_pred CCEEEEecCCceEEEeeccccCCCCCCCCCccccccc--ccccEEEEEECC---CCCEEEEEe------CCCcEEEEecC
Q 020798 35 GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTG--HEQGVSDLVFSS---DSRFLVSAS------DDKTIRLWDVP 103 (321)
Q Consensus 35 g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~--h~~~i~~~~~~~---~~~~l~~~~------~d~~i~iwd~~ 103 (321)
+..+++++.|+.+..+|..+... +..+.. +......+..+| ++. ++.++ .++.|..||..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~--------~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~ 191 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQR--------AWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAE 191 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCE--------EEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETT
T ss_pred CCEEEEEccCCEEEEEECCCCCE--------eeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECC
Confidence 55777888899998888754321 111110 000000111112 444 44443 36899999999
Q ss_pred CcceeeeeecC-------------------------------cccEEEEEECCCCCEEEEeeCCCc--------------
Q 020798 104 TATCLKTLIGH-------------------------------TNYVFCVNFNPQSNMIVSGAFDET-------------- 138 (321)
Q Consensus 104 ~~~~~~~~~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~dg~-------------- 138 (321)
+++.+..+... ......++++|+.+.++.+..++.
T Consensus 192 tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~ 271 (689)
T 1yiq_A 192 TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDN 271 (689)
T ss_dssp TCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCC
T ss_pred CCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCc
Confidence 99876554310 001125678888888888877653
Q ss_pred -----EEEEecCCCEEEEEEeC--CC-------CCeeEEEEccCCC---EEEEEeCCCeEEEEeCCCCceeeeeccCC--
Q 020798 139 -----VRIWDVKTGKCLKVLPA--HS-------DPVTAVDFNRDGT---MIVTSSYDGLCRIWDASTGHCMKTLIDDE-- 199 (321)
Q Consensus 139 -----i~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-- 199 (321)
|..+|.++++.+-.++. |. .+........+|+ .++.++.+|.++++|.++++.+.......
T Consensus 272 ~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~ 351 (689)
T 1yiq_A 272 LFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQS 351 (689)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCS
T ss_pred eeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccc
Confidence 99999999998776654 21 1222222233554 68888999999999999998763221100
Q ss_pred -------------------------C-----------CCeEEEEEccCCCEEEEEec-----------------------
Q 020798 200 -------------------------N-----------PPVSFVKFSPNGKFILVGTL----------------------- 220 (321)
Q Consensus 200 -------------------------~-----------~~~~~~~~~~~g~~l~~~~~----------------------- 220 (321)
. ..-..++++|+...+++...
T Consensus 352 w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (689)
T 1yiq_A 352 WTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQ 431 (689)
T ss_dssp SEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCC
T ss_pred cccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccc
Confidence 0 00112678888777776532
Q ss_pred ----------------------CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce
Q 020798 221 ----------------------DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 221 ----------------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
++.|..||+.+++.+-.+..+..... ..+. ..+.+++.|+.||.|+.||.++++
T Consensus 432 ~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~---g~~~-tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 432 LGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNG---GTLS-TAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp CSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCC---CEEE-ETTTEEEEECTTSEEEEEETTTCC
T ss_pred cCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccC---ccce-ECCCEEEEECCCCcEEEEECCCCc
Confidence 37799999999998877765432111 1112 356678889999999999999999
Q ss_pred EEEEecCCCCC-eEEEEecCCCceEEE
Q 020798 279 VVQKLEGHTDP-VISVASHPTENIIAS 304 (321)
Q Consensus 279 ~~~~~~~h~~~-v~~~~~~p~~~~l~s 304 (321)
.+.+++..... -.-+.|..+|+..++
T Consensus 508 ~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 508 KLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp EEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred cceeeeCCCCcccCceEEEECCEEEEE
Confidence 99888754322 234666778875544
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=1.1e-09 Score=90.34 Aligned_cols=220 Identities=15% Similarity=0.050 Sum_probs=137.7
Q ss_pred ccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 24 RAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 24 ~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
.-...++|+|++ .++++...++.|..|+..... ...+. ....+.+++++++|+++++. .+ .|.+||.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~ 116 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGR---------KTVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDT 116 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------EEEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEET
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEEC
Confidence 345678999975 456666678889888764321 11111 23568999999999877654 44 4999998
Q ss_pred CCcceeeeeec----CcccEEEEEECCCCCEEEEeeC------CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEE
Q 020798 103 PTATCLKTLIG----HTNYVFCVNFNPQSNMIVSGAF------DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMI 172 (321)
Q Consensus 103 ~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 172 (321)
.+++....... ....+..++++|+|+++++... .+.|..++ +++.... .........++|+|+++.+
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~-~~~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL-FADISIPNSICFSPDGTTG 193 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE-EEEESSEEEEEECTTSCEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe-eCCCcccCCeEEcCCCCEE
Confidence 87764322111 1245789999999987665432 24566666 4554332 2223346789999999866
Q ss_pred EEE-eCCCeEEEEeCC--CC-cee--eee--ccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc
Q 020798 173 VTS-SYDGLCRIWDAS--TG-HCM--KTL--IDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS 244 (321)
Q Consensus 173 ~~~-~~dg~i~~~d~~--~~-~~~--~~~--~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 244 (321)
+.+ +.++.|.+||+. ++ ... ..+ ..........+.++++|.+.++...++.|.+||. +++.+..+..+...
T Consensus 194 yv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~ 272 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQ 272 (326)
T ss_dssp EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSB
T ss_pred EEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCC
Confidence 554 557899999975 44 311 111 1112234567899999987776666788999998 67777776544332
Q ss_pred eeEEEeEEEecCCeEEE
Q 020798 245 KYCISSTFSVTNGKYIV 261 (321)
Q Consensus 245 ~~~~~~~~~~~~~~~l~ 261 (321)
..+ ..+..+++..|+
T Consensus 273 ~~~--~af~g~d~~~L~ 287 (326)
T 2ghs_A 273 TTC--PAFIGPDASRLL 287 (326)
T ss_dssp EEE--EEEESTTSCEEE
T ss_pred cEE--EEEecCCCCEEE
Confidence 222 233325555443
No 224
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.37 E-value=3.6e-10 Score=93.28 Aligned_cols=267 Identities=14% Similarity=0.065 Sum_probs=162.9
Q ss_pred CcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 22 HLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 22 h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
+...+.++...++|. |..++.+ +..++..... +..+...........+. +..+..++.++.|..+|
T Consensus 58 ~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~~g~~---------~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d 123 (330)
T 3hxj_A 58 GEIIECRPSIGKDGT-IYFGSDK--VYAINPDGTE---------KWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAIN 123 (330)
T ss_dssp GGEEEECCEETTTTE-ECCSSCE--EEEECCCGGG---------GGGSCC-----CCEEEE--TTEEEEECTTSEEEEEC
T ss_pred CCCcccceEEecCCc-EEEecCc--EEEECCCCcE---------EEEEECCCCcccCceEE--CCEEEEEecCCEEEEEc
Confidence 334567777777776 4445444 6666542211 11111111112222222 44577788889999999
Q ss_pred cCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeE
Q 020798 102 VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLC 181 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 181 (321)
.. ++...........+.++...+++. +..++.++.|..+|.. ++....+......+.++...+++.+++ ++ +.+
T Consensus 124 ~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l 197 (330)
T 3hxj_A 124 TD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKV 197 (330)
T ss_dssp TT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSE
T ss_pred CC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEE
Confidence 88 665555444444455666676766 5556778999999988 776666665556677777777777554 44 778
Q ss_pred EEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEE
Q 020798 182 RIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIV 261 (321)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 261 (321)
..+| .+++....... ....+..+...++|. +.+++.++.|..+|. +++.+..+......... .....++ .|.
T Consensus 198 ~~~d-~~g~~~~~~~~-~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~---~~~~~~g-~l~ 269 (330)
T 3hxj_A 198 YAIN-PDGTEKWNFYA-GYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESS---PVIGNTD-TIY 269 (330)
T ss_dssp EEEC-TTSCEEEEECC-SSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSC---CEECTTS-CEE
T ss_pred EEEC-CCCcEEEEEcc-CCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCcccc---ceEcCCC-eEE
Confidence 8999 66655444332 223456677787775 455677788888884 56666555433221111 1222344 566
Q ss_pred EeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 262 SGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 262 ~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.++.+|.|..+|. +++.+..+......+.++...+++.+++.+ .+|.+++...+.
T Consensus 270 v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt---~~G~~~~~~~~~ 324 (330)
T 3hxj_A 270 FGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGT---RNGKFYALFNLE 324 (330)
T ss_dssp EECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEEC---TTSCEEEEEC--
T ss_pred EecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEc---CCCeEEEEeccc
Confidence 6788888999995 677666665555667788887888777653 468888876653
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.36 E-value=1.2e-09 Score=91.87 Aligned_cols=223 Identities=13% Similarity=0.163 Sum_probs=143.6
Q ss_pred CCCCEEE-EEeCCCcEEEEecCCc----ceeeeee------cC-cccEEEEEECCCCCEEEEeeCC------CcEEEEec
Q 020798 83 SDSRFLV-SASDDKTIRLWDVPTA----TCLKTLI------GH-TNYVFCVNFNPQSNMIVSGAFD------ETVRIWDV 144 (321)
Q Consensus 83 ~~~~~l~-~~~~d~~i~iwd~~~~----~~~~~~~------~~-~~~v~~~~~~~~~~~l~~~~~d------g~i~~wd~ 144 (321)
+++++|+ .+..++.|.++|+.+. +..+.+. .. ......+...|+| .++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7777765 5667788999998654 4444441 01 1234567788999 77766555 78999999
Q ss_pred CCCEEEEEEeCCCCC---eeEEEEccCCCEEEEEe-------------------CCCeEEEEeCCCCceeeeeccC-CCC
Q 020798 145 KTGKCLKVLPAHSDP---VTAVDFNRDGTMIVTSS-------------------YDGLCRIWDASTGHCMKTLIDD-ENP 201 (321)
Q Consensus 145 ~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~-------------------~dg~i~~~d~~~~~~~~~~~~~-~~~ 201 (321)
++.+.+..++....+ ...+.|+|+++.+++.. .+.+|.+||+.+++...++... ...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 999988887633222 34588899999888875 3689999999987766665443 112
Q ss_pred CeEEEEE--ccCCCEEEEEec------CCeEEEEeCCCCcE--EEEE--ecc--CCc-----------eeEEEeEEEecC
Q 020798 202 PVSFVKF--SPNGKFILVGTL------DNTLRLWNYSTGKI--LKTY--TGH--TNS-----------KYCISSTFSVTN 256 (321)
Q Consensus 202 ~~~~~~~--~~~g~~l~~~~~------d~~i~i~d~~~~~~--~~~~--~~~--~~~-----------~~~~~~~~~~~~ 256 (321)
....+.| +|+++++++++. +++|.+|....++. ++.+ ... ... ..........+|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3344555 999999888774 55787776554432 1111 110 000 001122334578
Q ss_pred CeEEEEeC-CCCeEEEEEccc---ceEEEEecCCC----------C----CeEEEEecCCCceEEEEe
Q 020798 257 GKYIVSGS-EDSCVYLWELQS---RKVVQKLEGHT----------D----PVISVASHPTENIIASGA 306 (321)
Q Consensus 257 ~~~l~~~~-~dg~i~vwd~~~---~~~~~~~~~h~----------~----~v~~~~~~p~~~~l~s~~ 306 (321)
|++|.++. ..+.|.+||+.. .+++..+.... . .-..++++|||++|.++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 88777654 578999999853 35555543220 1 237899999999988876
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.34 E-value=1.3e-09 Score=98.78 Aligned_cols=257 Identities=12% Similarity=0.119 Sum_probs=160.2
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccc-c----ccEEE-EEECCCCCEEEEEeC------CCcEEEEe
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGH-E----QGVSD-LVFSSDSRFLVSASD------DKTIRLWD 101 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h-~----~~i~~-~~~~~~~~~l~~~~~------d~~i~iwd 101 (321)
++..+++++.|+.+..+|..+... +..+..+ . ..+.. ... .+..++.++. ++.|..+|
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~--------~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D 196 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKE--------VWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYD 196 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCE--------EEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCE--------EeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEE
Confidence 356777888899998888754321 1111111 0 01110 011 1334444443 68999999
Q ss_pred cCCcceeeeeecCcc--------------------------------cEEEEEECCCCCEEEEeeCCC------------
Q 020798 102 VPTATCLKTLIGHTN--------------------------------YVFCVNFNPQSNMIVSGAFDE------------ 137 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~--------------------------------~v~~~~~~~~~~~l~~~~~dg------------ 137 (321)
..+++.+..+..... ....++++|+++.++.+..++
T Consensus 197 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~ 276 (677)
T 1kb0_A 197 AETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKG 276 (677)
T ss_dssp TTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTC
T ss_pred CCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccC
Confidence 999987655432111 112467888888888776553
Q ss_pred -------cEEEEecCCCEEEEEEeC--CC-------CCeeEEEEccCC---CEEEEEeCCCeEEEEeCCCCceeeeeccC
Q 020798 138 -------TVRIWDVKTGKCLKVLPA--HS-------DPVTAVDFNRDG---TMIVTSSYDGLCRIWDASTGHCMKTLIDD 198 (321)
Q Consensus 138 -------~i~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 198 (321)
.|..+|.++++.+-.++. |. .....+....+| ..++.++.+|.++++|.++++.+......
T Consensus 277 gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~ 356 (677)
T 1kb0_A 277 GDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFV 356 (677)
T ss_dssp CCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred CCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccc
Confidence 499999999988766653 21 112223333466 57888999999999999999876543211
Q ss_pred CC----------CCe------------------------EEEEEccCCCEEEEEecC-----------------------
Q 020798 199 EN----------PPV------------------------SFVKFSPNGKFILVGTLD----------------------- 221 (321)
Q Consensus 199 ~~----------~~~------------------------~~~~~~~~g~~l~~~~~d----------------------- 221 (321)
.. .++ ..++++|++.++++...+
T Consensus 357 ~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~ 436 (677)
T 1kb0_A 357 PVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQS 436 (677)
T ss_dssp CCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTG
T ss_pred ccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccc
Confidence 10 000 146788988888775431
Q ss_pred --------------------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE
Q 020798 222 --------------------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ 281 (321)
Q Consensus 222 --------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (321)
+.|..||+.+++.+-.+..... ... ..+. .++..++.++.||.+++||.++++.+.
T Consensus 437 ~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~--g~~~-~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 437 GTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP-WNG--GTLT-TAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp GGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS-CCC--CEEE-ETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC-CcC--cceE-eCCCEEEEECCCCcEEEEECCCCceee
Confidence 6799999999998877653321 111 1122 356677778999999999999999998
Q ss_pred EecCCC-CCeEEEEecCCCceEEE
Q 020798 282 KLEGHT-DPVISVASHPTENIIAS 304 (321)
Q Consensus 282 ~~~~h~-~~v~~~~~~p~~~~l~s 304 (321)
.+.... ..-.-+.+.++|+.++.
T Consensus 513 ~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 513 EAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEECSSCCCSCCEEEEETTEEEEE
T ss_pred eeeCCCCcccCCEEEEeCCEEEEE
Confidence 887443 22234556678865544
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.34 E-value=1.4e-10 Score=96.51 Aligned_cols=218 Identities=6% Similarity=-0.064 Sum_probs=132.5
Q ss_pred cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEee----------CCCcEEEEecCCCEEEEEEeCCC-------C
Q 020798 96 TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA----------FDETVRIWDVKTGKCLKVLPAHS-------D 158 (321)
Q Consensus 96 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~~wd~~~~~~~~~~~~~~-------~ 158 (321)
.|.++|..+++.+..+..-..+ .+.++||+++++.+. .++.|.+||+.+++.+..++... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999988877544444 799999999888875 36889999999999888876441 2
Q ss_pred CeeEEEEccCCCEEEEEeC--CCeEEE--EeCCCCceeeeeccCCCCC------eEEEEE--------------------
Q 020798 159 PVTAVDFNRDGTMIVTSSY--DGLCRI--WDASTGHCMKTLIDDENPP------VSFVKF-------------------- 208 (321)
Q Consensus 159 ~v~~~~~~~~~~~l~~~~~--dg~i~~--~d~~~~~~~~~~~~~~~~~------~~~~~~-------------------- 208 (321)
....++++|||++++++.. +..+.+ +|+.+ +..+....... -..+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 3567999999999888874 467888 88865 12221100000 000111
Q ss_pred -----------------ccCCCEEEEEecCCeEEEEeCCCCc--EEEEEecc------CCc-eeEEEeEEEecCCeEEEE
Q 020798 209 -----------------SPNGKFILVGTLDNTLRLWNYSTGK--ILKTYTGH------TNS-KYCISSTFSVTNGKYIVS 262 (321)
Q Consensus 209 -----------------~~~g~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~------~~~-~~~~~~~~~~~~~~~l~~ 262 (321)
.+++..++..+. +.+.+.|+.... .+..+... ... ..........++++.++.
T Consensus 202 v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV 280 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred EEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence 222222233333 556666664322 22211100 000 000000122356665554
Q ss_pred eCC---------CCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 263 GSE---------DSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 263 ~~~---------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+.. ++.+.++|+.+.+.+.++.... ...+++|+||++++..+....++.|.++|.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred EeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 322 2356699999999988876543 57999999999855444432357899999753
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.34 E-value=3.4e-09 Score=89.24 Aligned_cols=260 Identities=12% Similarity=0.069 Sum_probs=154.7
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeec
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG 113 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 113 (321)
++..+++++.++.+..+|..+.. .+............... .+..++.++.++.|..+|..+++.+.....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~--------~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGT--------VAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCC--------EEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--------EEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 35567777788888888765321 11111111110011111 134677788899999999999887655443
Q ss_pred CcccE-----EEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCC-------eeEEEEcc--CCCEEEEEeCCC
Q 020798 114 HTNYV-----FCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDP-------VTAVDFNR--DGTMIVTSSYDG 179 (321)
Q Consensus 114 ~~~~v-----~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-------v~~~~~~~--~~~~l~~~~~dg 179 (321)
..... ...... +..++.+..++.+..+|.++++..-........ +..+...| .+..++.++.++
T Consensus 172 ~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g 249 (376)
T 3q7m_A 172 DMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG 249 (376)
T ss_dssp CC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTS
T ss_pred CCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCc
Confidence 22111 111111 457778888999999999998876655432110 00000111 245677888899
Q ss_pred eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeE
Q 020798 180 LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKY 259 (321)
Q Consensus 180 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (321)
.+..+|.++++....... .....+.. ++..+++++.++.|..+|..+++.+........... ..... .+..
T Consensus 250 ~l~~~d~~tG~~~w~~~~---~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~--~~~~~--~~~~ 320 (376)
T 3q7m_A 250 NLTALDLRSGQIMWKREL---GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLL--TSPVL--YNGN 320 (376)
T ss_dssp CEEEEETTTCCEEEEECC---CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCC--CCCEE--ETTE
T ss_pred EEEEEECCCCcEEeeccC---CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcc--cCCEE--ECCE
Confidence 999999998876654321 12333333 456788888899999999999998776652211111 00111 2456
Q ss_pred EEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 260 IVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
|+.++.+|.|.++|..+++.+.........+.+.....++ .|..++ .+|.|..|+
T Consensus 321 l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~-~l~v~~--~~G~l~~~~ 375 (376)
T 3q7m_A 321 LVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADG-KLLIQA--KDGTVYSIT 375 (376)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETT-EEEEEB--TTSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECC-EEEEEe--CCCEEEEEe
Confidence 7778889999999999999887776533343322222244 444454 457888876
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.33 E-value=1e-09 Score=92.41 Aligned_cols=262 Identities=8% Similarity=0.009 Sum_probs=154.7
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccc---------cccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGH---------EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h---------~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
++..+++++.++.+..+|..+... +...... ...+.... ..++..++.++.++.|..+|..+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~--------~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~t 122 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKE--------IWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSD 122 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCE--------EEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTT
T ss_pred ECCEEEEEcCCCeEEEEEccCCce--------eeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCC
Confidence 356777788888898888753221 1111100 12222211 12345677888999999999999
Q ss_pred cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCe-----eEEEEccCCCEEEEEeCCC
Q 020798 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPV-----TAVDFNRDGTMIVTSSYDG 179 (321)
Q Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg 179 (321)
++.................. +..++.++.++.|..+|.++++.+.......... ...... +..++++..++
T Consensus 123 G~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g 198 (376)
T 3q7m_A 123 GTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNG 198 (376)
T ss_dssp CCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTT
T ss_pred CCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCC
Confidence 98765544332211111121 4577788889999999999998776655432111 111222 34677788899
Q ss_pred eEEEEeCCCCceeeeeccCCCCCe---EE---EEEcc--CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeE
Q 020798 180 LCRIWDASTGHCMKTLIDDENPPV---SF---VKFSP--NGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISST 251 (321)
Q Consensus 180 ~i~~~d~~~~~~~~~~~~~~~~~~---~~---~~~~~--~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 251 (321)
.+..+|..+++............. .. +...| .+..+++++.++.+..+|..+++.+...... .... .
T Consensus 199 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~---~ 273 (376)
T 3q7m_A 199 RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG--SVND---F 273 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC--CEEE---E
T ss_pred EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC--CCCC---c
Confidence 999999998876654432111000 00 00011 2456777788999999999999887665422 1111 1
Q ss_pred EEecCCeEEEEeCCCCeEEEEEcccceEEEEecCC-CCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH-TDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
. . ++..+..++.++.|..+|..+++.+...... ...+...... +..|..++ .+|.|..+|.+
T Consensus 274 ~-~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~--~~g~l~~~d~~ 336 (376)
T 3q7m_A 274 I-V-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGD--SEGYLHWINVE 336 (376)
T ss_dssp E-E-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEEC--TTSEEEEEETT
T ss_pred e-E-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEe--CCCeEEEEECC
Confidence 1 1 2455666778899999999999988776522 2222233332 34555554 35778888764
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.33 E-value=2.3e-10 Score=95.28 Aligned_cols=245 Identities=13% Similarity=0.065 Sum_probs=152.1
Q ss_pred EEEECCCCCEEEEec----------CCceEEEeeccccCCCCCCCCCcccccccc-------cccEEEEEECCCCCEEEE
Q 020798 28 SVKFSHDGRLLASSS----------ADKTLLTYSLSSISNSDSTPPSPLQKFTGH-------EQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 28 ~~~~s~~g~~l~~~~----------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~i~~~~~~~~~~~l~~ 90 (321)
.++++|||++++++. .++.|.+||..... .+..+..+ ......++++|||+++++
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--------vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyV 140 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--------PIADIELPDAPRFSVGPRVHIIGNCASSACLLF 140 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--------EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--------EEEEEECCCccccccCCCcceEEEcCCCCEEEE
Confidence 699999999998885 36889999876532 22332211 023457899999999998
Q ss_pred EeC--CCcEEE--EecCCcceeeeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecCC-----CEEEE----EEeCC
Q 020798 91 ASD--DKTIRL--WDVPTATCLKTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVKT-----GKCLK----VLPAH 156 (321)
Q Consensus 91 ~~~--d~~i~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~~-----~~~~~----~~~~~ 156 (321)
+.. +..+.+ +|..+ +..+..-.. ..+.|++ ..+++.+.|+.+.+.|+.+ ++... .+...
T Consensus 141 an~~~~~~v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg 213 (368)
T 1mda_H 141 FLFGSSAAAGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCS 213 (368)
T ss_dssp EECSSSCEEEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBC
T ss_pred EccCCCCeEEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCC
Confidence 864 456888 88876 333321110 1123444 3455566788888888876 33221 11122
Q ss_pred CCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCc--eeeeeccC------CC---CCeEEEEEccCCCEEEEEec-C---
Q 020798 157 SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGH--CMKTLIDD------EN---PPVSFVKFSPNGKFILVGTL-D--- 221 (321)
Q Consensus 157 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~------~~---~~~~~~~~~~~g~~l~~~~~-d--- 221 (321)
..+. . .+++..++..+. +.+.+.|..+.. ....+... .. .....++++|+++.++++.. +
T Consensus 214 ~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~ 288 (368)
T 1mda_H 214 SQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRS 288 (368)
T ss_dssp SCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSC
T ss_pred CCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCc
Confidence 2333 3 556666666666 899999986532 22221100 00 11122679999998887643 2
Q ss_pred -----CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCe-EEEEeC-CCCeEEEEEcccceEEEEecCCCCCeEEEE
Q 020798 222 -----NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGK-YIVSGS-EDSCVYLWELQSRKVVQKLEGHTDPVISVA 294 (321)
Q Consensus 222 -----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 294 (321)
+.+.++|+.+.+.+..+..... ...+ ...+||+ .+++.. .++.|.++|+.+++.+..+.....+ ..++
T Consensus 289 ~~~~~~~~~ViD~~t~~vv~~i~vg~~-p~gi---~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P-~~i~ 363 (368)
T 1mda_H 289 CLAAAENTSSVTASVGQTSGPISNGHD-SDAI---IAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP-ESLS 363 (368)
T ss_dssp TTSCEEEEEEEESSSCCEEECCEEEEE-ECEE---EECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCC-CEEE
T ss_pred ccccCCCEEEEECCCCeEEEEEECCCC-cceE---EECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCC-CEEE
Confidence 3577999999998887754331 2222 2346776 566666 5999999999999999998866544 6666
Q ss_pred ecC
Q 020798 295 SHP 297 (321)
Q Consensus 295 ~~p 297 (321)
+.+
T Consensus 364 ~~~ 366 (368)
T 1mda_H 364 VQN 366 (368)
T ss_dssp CCC
T ss_pred eec
Confidence 654
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.32 E-value=2.6e-08 Score=79.62 Aligned_cols=221 Identities=6% Similarity=0.006 Sum_probs=139.5
Q ss_pred ccEEEEEECCCCCEEE-EEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCCcEEEEecCCCEEEE
Q 020798 74 QGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~ 151 (321)
..+..++|+++++.|+ +-..++.|..+++..................++++|+++.++ +....+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 4577899999765555 555678899999876543322222224578899999766554 44556789999986433222
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeC---CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEE
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSY---DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLW 227 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~ 227 (321)
...........++++|++..++.+.. .+.|..+++.... ...+..........+++++++..|..+. ..+.|.++
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 22222245688999997665555543 4688888876432 2222222223467899999877666555 56789999
Q ss_pred eCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC-CCeEEEEecCCCc
Q 020798 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT-DPVISVASHPTEN 300 (321)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~ 300 (321)
|+............ .....+. ..++..+++....+.|.++|..+++.+..+.... .....+++.|++.
T Consensus 195 ~~~g~~~~~~~~~~-~~P~gi~----~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 195 NPAQPGRRKVLEGL-QYPFAVT----SYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ETTEEEEEEEEECC-CSEEEEE----EETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred ecCCCceEEEecCC-CCceEEE----EeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 98755443333322 1222222 2356666666677899999999898888776433 2357788888764
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.31 E-value=1.4e-09 Score=98.41 Aligned_cols=232 Identities=12% Similarity=0.087 Sum_probs=150.4
Q ss_pred CCCEEEEEeCCCcEEEEecCCcceeeeeecC-c----ccEE-EEEECCCCCEEEEeeC------CCcEEEEecCCCEEEE
Q 020798 84 DSRFLVSASDDKTIRLWDVPTATCLKTLIGH-T----NYVF-CVNFNPQSNMIVSGAF------DETVRIWDVKTGKCLK 151 (321)
Q Consensus 84 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~----~~v~-~~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~~~ 151 (321)
.+..++.++.|+.|..+|..+++.+..+... . ..+. ...+ .+..++.++. ++.|+.+|.++++.+-
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 3567888899999999999999887666543 1 1111 0111 2345555543 6899999999998876
Q ss_pred EEeCCCCC--------------------------------eeEEEEccCCCEEEEEeCCC-------------------e
Q 020798 152 VLPAHSDP--------------------------------VTAVDFNRDGTMIVTSSYDG-------------------L 180 (321)
Q Consensus 152 ~~~~~~~~--------------------------------v~~~~~~~~~~~l~~~~~dg-------------------~ 180 (321)
.+...... ...++++|++..++.+..++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 66432211 13578888888888877654 5
Q ss_pred EEEEeCCCCceeeeeccCCC--------CCeEEEEEccCC---CEEEEEecCCeEEEEeCCCCcEEEEEeccCCc-ee--
Q 020798 181 CRIWDASTGHCMKTLIDDEN--------PPVSFVKFSPNG---KFILVGTLDNTLRLWNYSTGKILKTYTGHTNS-KY-- 246 (321)
Q Consensus 181 i~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~g---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~-- 246 (321)
|..+|.++++..-.+..... .....+....+| ..++.++.+|.+.++|..+++++..+...... ..
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 99999999987655432111 112233344477 67888999999999999999988766422100 00
Q ss_pred -----EEE------------------------eEEEecCCeEEEEeCC--------------------------------
Q 020798 247 -----CIS------------------------STFSVTNGKYIVSGSE-------------------------------- 265 (321)
Q Consensus 247 -----~~~------------------------~~~~~~~~~~l~~~~~-------------------------------- 265 (321)
.+. .....++..+++++..
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 000 0112244444544321
Q ss_pred -----------CCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 266 -----------DSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 266 -----------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.|.|..||+.+++.+.++.. ..++.+..+..++.++..++ .++.+++||.+.
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~--~dg~l~a~D~~t 507 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGT--ADGRLVAYHAAT 507 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEEC--TTSEEEEEETTT
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEEC--CCCcEEEEECCC
Confidence 27899999999999887753 34566666777777777775 568999999763
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.30 E-value=1.1e-09 Score=99.42 Aligned_cols=281 Identities=11% Similarity=0.086 Sum_probs=162.8
Q ss_pred CCEEEEecCCceEEEeeccccCCCCC-CCCCccccccccc-ccE-EEEEECCCCCEEEEEeCCCcEEEEecCCcceeeee
Q 020798 35 GRLLASSSADKTLLTYSLSSISNSDS-TPPSPLQKFTGHE-QGV-SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL 111 (321)
Q Consensus 35 g~~l~~~~~d~~v~~~~~~~~~~~~~-~~~~~~~~~~~h~-~~i-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 111 (321)
+..+++++.++.+..+|..+...... ............. ..+ ..+.+ .+..++.++.|+.|..+|..+++.+...
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 55677777788888887654321100 0000000000000 000 11122 3457888889999999999999876554
Q ss_pred ecC--cccEEEEEECC--CCCEEEEee------CCCcEEEEecCCCEEEEEEeCCC------------------------
Q 020798 112 IGH--TNYVFCVNFNP--QSNMIVSGA------FDETVRIWDVKTGKCLKVLPAHS------------------------ 157 (321)
Q Consensus 112 ~~~--~~~v~~~~~~~--~~~~l~~~~------~dg~i~~wd~~~~~~~~~~~~~~------------------------ 157 (321)
... ......+..+| .+..++.+. .++.|+.||.++++.+-.+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 431 11101111122 133444443 36899999999998776554210
Q ss_pred -------CCeeEEEEccCCCEEEEEeCCCe-------------------EEEEeCCCCceeeeeccC-C-------CCCe
Q 020798 158 -------DPVTAVDFNRDGTMIVTSSYDGL-------------------CRIWDASTGHCMKTLIDD-E-------NPPV 203 (321)
Q Consensus 158 -------~~v~~~~~~~~~~~l~~~~~dg~-------------------i~~~d~~~~~~~~~~~~~-~-------~~~~ 203 (321)
.....+++.|+...++.+..++. |..+|.++++..-..... + ....
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~ 307 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 307 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCc
Confidence 01125788888888888887763 999999999876554322 1 1112
Q ss_pred EEEEEccCCC---EEEEEecCCeEEEEeCCCCcEEEEEeccCCc-eeE------------------------EEe-----
Q 020798 204 SFVKFSPNGK---FILVGTLDNTLRLWNYSTGKILKTYTGHTNS-KYC------------------------ISS----- 250 (321)
Q Consensus 204 ~~~~~~~~g~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~------------------------~~~----- 250 (321)
.......+|+ .++.++.+|.++++|..+++++......... ... +.+
T Consensus 308 ~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~G 387 (689)
T 1yiq_A 308 ILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWG 387 (689)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTC
T ss_pred EEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCccc
Confidence 2222333565 6888899999999999999987544321100 000 000
Q ss_pred ------EEEecCCeEEEEeC---------------------------------------------CCCeEEEEEcccceE
Q 020798 251 ------TFSVTNGKYIVSGS---------------------------------------------EDSCVYLWELQSRKV 279 (321)
Q Consensus 251 ------~~~~~~~~~l~~~~---------------------------------------------~dg~i~vwd~~~~~~ 279 (321)
....++..+++++. .+|.|+.||+.+++.
T Consensus 388 g~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~ 467 (689)
T 1yiq_A 388 AHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA 467 (689)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE
T ss_pred ccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe
Confidence 11123333343321 148899999999999
Q ss_pred EEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 280 VQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 280 ~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
+.++..+. ++....+...+.++..|+ .|+.|+.||.+.
T Consensus 468 ~W~~~~~~-~~~~g~~~tagglvf~gt--~dg~l~a~D~~t 505 (689)
T 1yiq_A 468 AWEVPYVT-IFNGGTLSTAGNLVFEGS--ADGRVIAYAADT 505 (689)
T ss_dssp EEEEEESS-SCCCCEEEETTTEEEEEC--TTSEEEEEETTT
T ss_pred EeEccCCC-CccCccceECCCEEEEEC--CCCcEEEEECCC
Confidence 88876543 344445666777888876 468999999763
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.30 E-value=1.2e-09 Score=94.99 Aligned_cols=220 Identities=15% Similarity=0.174 Sum_probs=149.7
Q ss_pred CCCCEEEEEeC-CCcEEEEecCCcceeeeeecC-cccEEEEEE-C-CCCCEEEEee------------------CCCcEE
Q 020798 83 SDSRFLVSASD-DKTIRLWDVPTATCLKTLIGH-TNYVFCVNF-N-PQSNMIVSGA------------------FDETVR 140 (321)
Q Consensus 83 ~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~~------------------~dg~i~ 140 (321)
+||++++.... ++.|.+.|+.+.++.+.+.-. ......+++ . |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 37888876654 557999999999877744321 234677887 5 8999988874 345789
Q ss_pred EEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC--------------------------------------eEE
Q 020798 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG--------------------------------------LCR 182 (321)
Q Consensus 141 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------------------------------~i~ 182 (321)
+.|..+.+...++.... ....++++|+|+++++++.+. .+.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999988887776433 346688999999988887553 356
Q ss_pred EEeCCC--Cce-eeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCc------------EEEEEeccCCcee
Q 020798 183 IWDAST--GHC-MKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGK------------ILKTYTGHTNSKY 246 (321)
Q Consensus 183 ~~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~------------~~~~~~~~~~~~~ 246 (321)
+.|.++ ++. +..+... .....+.++|||+++++++ .+.+|.++|+.+.+ .+.......++
T Consensus 258 VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP-- 333 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP-- 333 (595)
T ss_dssp EEECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE--
T ss_pred EEeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc--
Confidence 666665 322 2222111 1234689999999988766 57899999998653 33333222222
Q ss_pred EEEeEEEecCCeEEEEeCCCCeEEEEEccc----------ceEEEEecCCCCCe-----EEEEecCCCceEEEEeecC
Q 020798 247 CISSTFSVTNGKYIVSGSEDSCVYLWELQS----------RKVVQKLEGHTDPV-----ISVASHPTENIIASGALDN 309 (321)
Q Consensus 247 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~----------~~~~~~~~~h~~~v-----~~~~~~p~~~~l~s~~~d~ 309 (321)
.-..| .++|...++.-.|+.|.+||+.. .+.+.++..|.++- .++..+|||++|.+...-.
T Consensus 334 -~h~aF-~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 334 -LHTAF-DGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp -EEEEE-CTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred -ceEEE-CCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCC
Confidence 22233 46786666778999999999987 56777887776542 2346789999999875433
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.27 E-value=3.8e-10 Score=93.88 Aligned_cols=224 Identities=10% Similarity=0.084 Sum_probs=137.2
Q ss_pred ccEEEEEECCCCCEEEEEe--CCCcEEEEecCCcceeeee-------ecCcccEEEEEECCCCCEEEEeeC-----CCcE
Q 020798 74 QGVSDLVFSSDSRFLVSAS--DDKTIRLWDVPTATCLKTL-------IGHTNYVFCVNFNPQSNMIVSGAF-----DETV 139 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i 139 (321)
..+..++++++|+.+++.. .++.++||.+.+++. ..+ ..+...+..++++++++.+++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5688999999999888753 234355555544432 211 124457899999999876555433 5789
Q ss_pred EEEecCCCEEEEEEeCC------CCCeeEEEEccCCCE-EEEEe---CCCeEEEEeCCCCceeeeeccCCCC-CeEEEEE
Q 020798 140 RIWDVKTGKCLKVLPAH------SDPVTAVDFNRDGTM-IVTSS---YDGLCRIWDASTGHCMKTLIDDENP-PVSFVKF 208 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~ 208 (321)
.+||+.+++.+..+... ......+++++++.. +++.. .++.|.+||+.+++..+.+. .+.. ......+
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~-~~~~~~~~~~~~ 174 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ-GYPGIAPEDIDL 174 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT-TCTTTSCCSCCC
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec-CCCcccccccce
Confidence 99999999877666532 234578999986544 45554 67899999998776544332 1110 0001334
Q ss_pred ccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC-eEEEEEccc---c-----eE
Q 020798 209 SPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS-CVYLWELQS---R-----KV 279 (321)
Q Consensus 209 ~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~vwd~~~---~-----~~ 279 (321)
.++|..+.+...++.++.|.. ... .....++++.|+.+..++ .+..++... + +.
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~--------------~~~---gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~ 237 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHL--------------GVN---GIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAEL 237 (343)
T ss_dssp EETTEECBEECTTSCEECCCC--------------CEE---EEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHH
T ss_pred eECCEEEEeccCCCceeceec--------------ccc---eeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhh
Confidence 556776766677777766531 111 122346787777665555 555554321 0 00
Q ss_pred EE--EecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 280 VQ--KLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 280 ~~--~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
.. ...++......++++++|+++++.. .++.|.+|+.
T Consensus 238 ~~~~~~~g~~g~pdgia~d~~G~l~va~~--~~~~V~~~d~ 276 (343)
T 2qe8_A 238 GSKIERYSEKPICDGISIDKDHNIYVGDL--AHSAIGVITS 276 (343)
T ss_dssp HTTCEEEEECCSCSCEEECTTCCEEEEEG--GGTEEEEEET
T ss_pred hcceEecccCCCCceEEECCCCCEEEEcc--CCCeEEEEEC
Confidence 00 1112333557899999999888865 3478999987
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.25 E-value=1.7e-12 Score=109.15 Aligned_cols=188 Identities=13% Similarity=0.036 Sum_probs=101.9
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeec
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG 113 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 113 (321)
++..+++++.|+.+..||..+.. .+..+.. ..+.+..+..+++.+++++.|+.|+.||..+++.+.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--------~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--------IKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--------EEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--------EEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeec
Confidence 57789999999999999865422 2222322 2333444556777788888999999999988876555433
Q ss_pred Cccc-EE-EEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce
Q 020798 114 HTNY-VF-CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC 191 (321)
Q Consensus 114 ~~~~-v~-~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 191 (321)
+... +. ...+. .+..+++++.++.++.||.++|+.+..+..+. ...++|++..+++++.++.++.||.++++.
T Consensus 78 ~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 78 TIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp CHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred cCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 3211 10 00111 34567788889999999999998776665443 234567788899999999999999998875
Q ss_pred eeeeccCCCCCeEEEEEccCC---CEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 192 MKTLIDDENPPVSFVKFSPNG---KFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~g---~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
........ .....+.++. ..+++++.++.+..||..+++.+-.+.
T Consensus 153 ~W~~~~~~---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 153 RWNATYFD---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CCEEEEEE---ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred EEeEeccc---ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 54332110 1112223321 456778889999999999998877665
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.24 E-value=2.4e-08 Score=78.88 Aligned_cols=197 Identities=12% Similarity=0.047 Sum_probs=132.4
Q ss_pred EEEEEECCCCCEEEEEeC--CCcEEEEecCCcceeeeeecCc-ccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEE
Q 020798 76 VSDLVFSSDSRFLVSASD--DKTIRLWDVPTATCLKTLIGHT-NYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~ 151 (321)
...+.|++++.++++.+. ++.|.++|+.+++.+..+.-.. .....+++. ++.| ++...++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999998755555443 5789999999999877654211 122344554 4454 445567899999999999888
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCC----CCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN----PPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
.++.... ....+++++..++++..++.+.++|..+.+....+..... ...+.+.+. +|..++....++.|.+.
T Consensus 101 ~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 101 NFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 8864311 1234566787777777789999999998877766543221 135567777 67554444457899999
Q ss_pred eCCCCcEEEEEeccC----------CceeEEEeEEEecC-CeEEEEeCCCCeEEEEEcccc
Q 020798 228 NYSTGKILKTYTGHT----------NSKYCISSTFSVTN-GKYIVSGSEDSCVYLWELQSR 277 (321)
Q Consensus 228 d~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~ 277 (321)
|..+++.+..+.... ............++ .++++++...+.|.+.++...
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999999998886421 00011222333344 577888888899999988654
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.22 E-value=1.8e-08 Score=79.48 Aligned_cols=195 Identities=12% Similarity=0.049 Sum_probs=129.6
Q ss_pred cEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEEEeCCCCC-eeEEEEccCCCEEE-EEeCCCeEEEEeCCCCcee
Q 020798 117 YVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIV-TSSYDGLCRIWDASTGHCM 192 (321)
Q Consensus 117 ~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~~~ 192 (321)
....+.+++++..+++.+. ++.|+++|+.+++.+..++....+ ...+++. +..+. +.-.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 3578999998654454443 579999999999988877643322 2345554 44444 4556889999999998877
Q ss_pred eeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc--eeEEEeEEEecCCeEEEEeCCCCeEE
Q 020798 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS--KYCISSTFSVTNGKYIVSGSEDSCVY 270 (321)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~ 270 (321)
.++... .+. ...++++|+.++++..++.|.++|..+.+.+..+.-.... ...+.-.... ++..++....++.|.
T Consensus 100 ~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 100 KNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EEEECC-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence 776433 111 2446678887877777889999999999888877643221 1111112222 677666666788999
Q ss_pred EEEcccceEEEEecCC-------------CCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 271 LWELQSRKVVQKLEGH-------------TDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 271 vwd~~~~~~~~~~~~h-------------~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+.|..+++.+..+.-. ......++|+|+++.|..++. ....+..-++
T Consensus 176 vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk-~~~~v~~i~l 235 (266)
T 2iwa_A 176 RISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK-LWPKLFEIKL 235 (266)
T ss_dssp EEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET-TCSEEEEEEE
T ss_pred EEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC-CCCeEEEEEE
Confidence 9999999988877531 124589999999865444432 2345555444
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.19 E-value=2.5e-09 Score=88.22 Aligned_cols=260 Identities=14% Similarity=0.076 Sum_probs=151.8
Q ss_pred EEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCcc
Q 020798 27 SSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT 106 (321)
Q Consensus 27 ~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 106 (321)
.++....+|. +..++.++.+..|+ .... .+.....+...+.++...+++. |..++.+ |..+|. +++
T Consensus 23 ~~~~~d~~g~-l~v~t~~~~l~~~d-~~g~--------~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~ 88 (330)
T 3hxj_A 23 SSPILAKNGT-IYLGSSNKNLYAIN-TDGS--------VKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGT 88 (330)
T ss_dssp CCCEECTTSC-EECSSTTTTTEEEC-TTSC--------EEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGG
T ss_pred cCceEccCCe-EEEEcCCCEEEEEC-CCCc--------EEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCc
Confidence 3445555554 56667778787776 3211 1112222334456777777776 4445444 888886 444
Q ss_pred eeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeC
Q 020798 107 CLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDA 186 (321)
Q Consensus 107 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~ 186 (321)
................+. +..+..++.++.+..+|.. ++...........+.++...+++. +..++.++.+..+|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~ 164 (330)
T 3hxj_A 89 EKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINP 164 (330)
T ss_dssp GGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECT
T ss_pred EEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECC
Confidence 333222222222222222 4567778888999999988 766655555555566677777776 556778899999998
Q ss_pred CCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC
Q 020798 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED 266 (321)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 266 (321)
. ++........ ...+..+...++|..++ ++ +.|..+| .+++.+..+........+ .....++. +..++.+
T Consensus 165 ~-g~~~~~~~~~-~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~---~~~~~~g~-l~v~t~~ 234 (330)
T 3hxj_A 165 D-GTEKWRFKTN-DAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTR---PAISEDGT-IYVTSLD 234 (330)
T ss_dssp T-SCEEEEEECS-SCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSC---CEECTTSC-EEEEETT
T ss_pred C-CCEeEEEecC-CCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceec---eEECCCCe-EEEEcCC
Confidence 8 6654443322 23455566777887554 44 7899999 777776666543322222 22234554 5556667
Q ss_pred CeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 267 SCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 267 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
+.|..+|. +++.+..+......+.++...+++.+.+. + .++.|..+|.
T Consensus 235 ~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-t--~~ggl~~~d~ 282 (330)
T 3hxj_A 235 GHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFG-S--YDGHLYAINP 282 (330)
T ss_dssp TEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEE-C--TTCEEEEECT
T ss_pred CeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEe-c--CCCCEEEECC
Confidence 88888874 55555555544444455666666665554 3 2456777764
No 240
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.16 E-value=3.7e-08 Score=76.92 Aligned_cols=183 Identities=12% Similarity=0.122 Sum_probs=124.3
Q ss_pred cEEEEEECCCCCEEEEeeCCC--cEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE-eCCCeEEEEeCCCCceee
Q 020798 117 YVFCVNFNPQSNMIVSGAFDE--TVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS-SYDGLCRIWDASTGHCMK 193 (321)
Q Consensus 117 ~v~~~~~~~~~~~l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~ 193 (321)
....+.|+ ++..+.+.+.+| .|+++|+++++....++.... .......++++.+... -.++.+.++|..+.+.+.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 34678888 566666777665 899999999998888765433 3333233345555544 468899999999988877
Q ss_pred eeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC--ceeEEEeEEEecCCeEEEEeCCCCeEEE
Q 020798 194 TLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTN--SKYCISSTFSVTNGKYIVSGSEDSCVYL 271 (321)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~dg~i~v 271 (321)
++..... ...++++++.|+.+..++.|.++|..+.+.+..+..... +...+.-.-. .+|+.++..-.+..|.+
T Consensus 122 ti~~~~e----G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 122 SFNYDGE----GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW-VDGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEECSSC----CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTSSEEEE
T ss_pred EEECCCC----ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE-ECCEEEEEEccCCeEEE
Confidence 7654322 234456788887777788899999999998888764321 1111111112 26877776667889999
Q ss_pred EEcccceEEEEecCC------------CCCeEEEEecCCCceEEEEe
Q 020798 272 WELQSRKVVQKLEGH------------TDPVISVASHPTENIIASGA 306 (321)
Q Consensus 272 wd~~~~~~~~~~~~h------------~~~v~~~~~~p~~~~l~s~~ 306 (321)
.|.++++.+..+.-. .+-.+++|++|+++.|...+
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 999999988776532 12458899999876554443
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.14 E-value=7.4e-08 Score=79.24 Aligned_cols=246 Identities=11% Similarity=0.080 Sum_probs=145.2
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcc-----------cccccccccEEEEEECC-CCCEEEEE
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPL-----------QKFTGHEQGVSDLVFSS-DSRFLVSA 91 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~-----------~~~~~h~~~i~~~~~~~-~~~~l~~~ 91 (321)
.....++|.++|+++.++..++.|..|+............... .........+..+++.+ +++++ .+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~-v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY-IV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE-EE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE-EE
Confidence 4456789999999888888888898886543110000000000 00001123578899997 66544 45
Q ss_pred eCCCcEEEEecCCcceeeeeec-----CcccEEEEEECC-CCCEEEEeeC-----------------CCcEEEEecCCCE
Q 020798 92 SDDKTIRLWDVPTATCLKTLIG-----HTNYVFCVNFNP-QSNMIVSGAF-----------------DETVRIWDVKTGK 148 (321)
Q Consensus 92 ~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~~wd~~~~~ 148 (321)
...+.+..+|..++.. ..+.. .......+++.+ +|+..++... ++.|..+|..+++
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 4445588888765532 22211 112467899999 8887666432 3678889987776
Q ss_pred EEEEEeCCCCCeeEEEEccCCCEEEEE-eCCCeEEEEeCCCCc--eeeeeccCCCCCeEEEEEccCCCEEEEEec-----
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGTMIVTS-SYDGLCRIWDASTGH--CMKTLIDDENPPVSFVKFSPNGKFILVGTL----- 220 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~----- 220 (321)
....... ......++++|+++.++.+ ...+.|..|++.... ....+.. ... ...++++++|++.++...
T Consensus 177 ~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 177 TTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCccccc
Confidence 4332221 1234679999999866555 567899999987421 1111111 112 677899999987666544
Q ss_pred -----CCeEEEEeCCCCcEEEEEeccCCc-eeEEEeEEEecCCeEEEEeCCCCeEEEEEccc
Q 020798 221 -----DNTLRLWNYSTGKILKTYTGHTNS-KYCISSTFSVTNGKYIVSGSEDSCVYLWELQS 276 (321)
Q Consensus 221 -----d~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (321)
.+.|..+|. .++.+..+....+. ...+..... .++.++++...++.|..+++..
T Consensus 254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 467888886 47777777543221 011111112 4677777777788899998753
No 242
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.09 E-value=1.3e-07 Score=79.55 Aligned_cols=193 Identities=11% Similarity=0.142 Sum_probs=127.1
Q ss_pred CCCCEEE-EeeCCCcEEEEecCCC----EEEEEEe-------CCCCCeeEEEEccCCCEEEEEeCC------CeEEEEeC
Q 020798 125 PQSNMIV-SGAFDETVRIWDVKTG----KCLKVLP-------AHSDPVTAVDFNRDGTMIVTSSYD------GLCRIWDA 186 (321)
Q Consensus 125 ~~~~~l~-~~~~dg~i~~wd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~~d~ 186 (321)
++.++|+ .+..++.|+++|+.+. +....+. ........+.+.|+| +++++..+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 6777765 5667889999998755 5555552 111234567788999 77766555 78999999
Q ss_pred CCCceeeeeccCCCCC--eEEEEEccCCCEEEEEe-------------------cCCeEEEEeCCCCcEEEEEeccCCce
Q 020798 187 STGHCMKTLIDDENPP--VSFVKFSPNGKFILVGT-------------------LDNTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 187 ~~~~~~~~~~~~~~~~--~~~~~~~~~g~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
.+.+.+.++....... ...+.|+|+++.++++. ...+|.+||+.+++.+..+.......
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9988877775332221 23477899999888874 36899999999988888876531111
Q ss_pred eEEEeEE-EecCCeEEEEeC------CCCeEEEEEcccceE--EEE--ecCC----------------CCCeEEEEecCC
Q 020798 246 YCISSTF-SVTNGKYIVSGS------EDSCVYLWELQSRKV--VQK--LEGH----------------TDPVISVASHPT 298 (321)
Q Consensus 246 ~~~~~~~-~~~~~~~l~~~~------~dg~i~vwd~~~~~~--~~~--~~~h----------------~~~v~~~~~~p~ 298 (321)
...-..+ ..++++++..++ .+++|.+|....++. .+. +... ......+.++||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 1111112 356787776665 567887776554321 111 1110 134678999999
Q ss_pred CceEEEEeecCCccEEEcccc
Q 020798 299 ENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 299 ~~~l~s~~~d~~~~i~iw~~~ 319 (321)
+++|-++... .+.|.+|+..
T Consensus 332 GrfLYVSnrg-~d~VavfdV~ 351 (462)
T 2ece_A 332 DKFLYLSLWG-IGEVRQYDIS 351 (462)
T ss_dssp SCEEEEEETT-TTEEEEEECS
T ss_pred CCEEEEEeCC-CCEEEEEEec
Confidence 9998887765 4689999864
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.09 E-value=5.4e-08 Score=75.99 Aligned_cols=180 Identities=11% Similarity=0.068 Sum_probs=122.6
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCee--EEEEccCCCEEEEEeCCCeEEEEeCCCCceeee
Q 020798 117 YVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVT--AVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT 194 (321)
Q Consensus 117 ~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 194 (321)
....+.|+. +..+.+.+.+|.|+++|+++++.+..+ ... ... .+++.. ++++.+.-.++.+.+||..+.+.+.+
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 346777773 556677788889999999999877666 322 333 345432 33444555788999999999888877
Q ss_pred eccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCce--eEEEeEEEecCCeEEEEeCCCCeEEEE
Q 020798 195 LIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSK--YCISSTFSVTNGKYIVSGSEDSCVYLW 272 (321)
Q Consensus 195 ~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~dg~i~vw 272 (321)
+..... ...++++++.|+.+..++.|.++|..+.+.+..+.-..... ..+.-.-+ .+|+.++..-.+..|.+.
T Consensus 132 i~~~~e----GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~-~dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 132 TRYSGE----GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC-ANGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EECSSC----CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTCSEEEEE
T ss_pred EeCCCc----eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE-eCCEEEEEECCCCeEEEE
Confidence 654322 13344678888888778999999999999888876433211 11111112 278777666678899999
Q ss_pred EcccceEEEEecCC-------------CCCeEEEEecCCCc-eEEEE
Q 020798 273 ELQSRKVVQKLEGH-------------TDPVISVASHPTEN-IIASG 305 (321)
Q Consensus 273 d~~~~~~~~~~~~h-------------~~~v~~~~~~p~~~-~l~s~ 305 (321)
|.++++.+..+.-. .+-.+++|++|+++ +++||
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999988776431 13468899999764 55554
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.08 E-value=4.2e-07 Score=70.35 Aligned_cols=183 Identities=13% Similarity=0.060 Sum_probs=122.3
Q ss_pred ccEEEEEECCCCCEEEEeeCC--CcEEEEecCCCEEEEEEeCCCCCe-eEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q 020798 116 NYVFCVNFNPQSNMIVSGAFD--ETVRIWDVKTGKCLKVLPAHSDPV-TAVDFNRDGTMIVTSSYDGLCRIWDASTGHCM 192 (321)
Q Consensus 116 ~~v~~~~~~~~~~~l~~~~~d--g~i~~wd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 192 (321)
.....+.|++ +..+.+.+.. +.|+.+|+++++....++...... ..+++. .++.+...-.++.+.++|..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3456888886 4555666654 489999999999888776544322 233433 2334444557899999999998887
Q ss_pred eeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCc--eeEEEeEEEecCCeEEEEeCCCCeEE
Q 020798 193 KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNS--KYCISSTFSVTNGKYIVSGSEDSCVY 270 (321)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~ 270 (321)
.++..... ...+.+++..|+++..++.|.++|..+.+.+..+.-.... ...+.-.-. .+|+.++..-.+..|.
T Consensus 99 ~ti~~~~~----Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~-~~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 99 ARFRYPGE----GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW-VNGELLANVWLTSRIA 173 (243)
T ss_dssp EEEECSSC----CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTTTEEE
T ss_pred EEEeCCCC----ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE-eCCEEEEEECCCCeEE
Confidence 77654322 2344567777777777889999999999988887643221 111111111 3687776665678999
Q ss_pred EEEcccceEEEEecCC------------C-CCeEEEEecCCCc-eEEEE
Q 020798 271 LWELQSRKVVQKLEGH------------T-DPVISVASHPTEN-IIASG 305 (321)
Q Consensus 271 vwd~~~~~~~~~~~~h------------~-~~v~~~~~~p~~~-~l~s~ 305 (321)
+.|.++++.+..+.-. . +-.+++|++|+++ +++||
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 9999999988776521 1 2458899999765 45554
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.08 E-value=3.6e-07 Score=75.08 Aligned_cols=234 Identities=15% Similarity=0.147 Sum_probs=139.3
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeec--------------------CcccEEEEEECCCCCEEEEee
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIG--------------------HTNYVFCVNFNPQSNMIVSGA 134 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~~~ 134 (321)
...++++.+++++++++..++.|..|+..+++.. .+.. .......+++.+++..|+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3467889999987888888999999998765432 1110 012467899997333455554
Q ss_pred CCCcEEEEecCCCEEEEEEeC-----CCCCeeEEEEcc-CCCEEEEEeC-----------------CCeEEEEeCCCCce
Q 020798 135 FDETVRIWDVKTGKCLKVLPA-----HSDPVTAVDFNR-DGTMIVTSSY-----------------DGLCRIWDASTGHC 191 (321)
Q Consensus 135 ~dg~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~~~d~~~~~~ 191 (321)
..+.|..+|..++.. ..+.. .......+++.+ +|+++++... ++.+..+|..+++.
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 445588888765532 22211 113467899999 8987666432 36788888876653
Q ss_pred eeeeccCCCCCeEEEEEccCCCEEEEE-ecCCeEEEEeCCCCc--EEEEEeccCCceeEEEeEEEecCCeEEEEeCC---
Q 020798 192 MKTLIDDENPPVSFVKFSPNGKFILVG-TLDNTLRLWNYSTGK--ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE--- 265 (321)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 265 (321)
.... .. ......++++|+|+.|.++ ...+.|.+|++.... ....+..... . ......++|.++++...
T Consensus 178 ~~~~-~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P---~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 178 TLLL-KE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-P---GNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp EEEE-EE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-E---EEEEECTTSCEEEEEEEETT
T ss_pred EEec-cC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-C---CCeEECCCCCEEEEecCccc
Confidence 2211 11 1224568999999876665 456899999987421 1122211111 1 12233467776665543
Q ss_pred -------CCeEEEEEcccceEEEEecCC----CCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 266 -------DSCVYLWELQSRKVVQKLEGH----TDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 266 -------dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
.+.|..+|.. ++.+..+... ...+.++++ .++.++++.. .++.|..+++++
T Consensus 252 ~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~--~~~~i~~~~~~~ 313 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTL--FHGSVGILVYDK 313 (322)
T ss_dssp SSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECS--SCSEEEEEEC--
T ss_pred ccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeec--CCCceEEEeccc
Confidence 4668888864 6666555433 234677776 4566665543 346788887753
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.05 E-value=5.2e-06 Score=76.90 Aligned_cols=271 Identities=11% Similarity=0.112 Sum_probs=163.4
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...|.++...++|. |..|+.++.+..++................. .....|.++...++|++. .|+.++-|..|+.
T Consensus 309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~--l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNS--LSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSS--CSCSSEEEEEECTTSCEE-EEESSSCEEEECT
T ss_pred CCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCC--CCCCeeEEEEECCCCCEE-EEECCCCeEEEcC
Confidence 35799999998887 4556667777777654321100000000001 124569999998888744 5777777999998
Q ss_pred CCcceeeeee--------cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe----CCCCCeeEEEEccCCC
Q 020798 103 PTATCLKTLI--------GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP----AHSDPVTAVDFNRDGT 170 (321)
Q Consensus 103 ~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~----~~~~~v~~~~~~~~~~ 170 (321)
.+++...... .....|.++...++++.|..|+.++-|..||.++++...... .....|.++...+++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 464 (795)
T 4a2l_A 385 ITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN 464 (795)
T ss_dssp TTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC
T ss_pred CCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC
Confidence 7665432211 123568899888888746667776779999988776433221 1245688888888887
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeecc-----CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec---cC
Q 020798 171 MIVTSSYDGLCRIWDASTGHCMKTLID-----DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG---HT 242 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~ 242 (321)
+.+. +.+| +..||..+++....... .....+..+..+++|++.+. +. +-|..||..+++. .+.. ..
T Consensus 465 lwig-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~-~Gl~~~~~~~~~~--~~~~~~~~~ 538 (795)
T 4a2l_A 465 LWLG-TLSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG-GE-EGLSVFKQEGLDI--QKASILPVS 538 (795)
T ss_dssp EEEE-ESSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEE-ES-SCEEEEEEETTEE--EECCCSCSC
T ss_pred EEEE-ecCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEE-eC-CceEEEeCCCCeE--EEecCCCCC
Confidence 5554 4444 77899877654322111 11245788888888876554 44 4588899876654 3321 10
Q ss_pred -CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEE--ecC-CCCCeEEEEecCCCceEEEE
Q 020798 243 -NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK--LEG-HTDPVISVASHPTENIIASG 305 (321)
Q Consensus 243 -~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~-h~~~v~~~~~~p~~~~l~s~ 305 (321)
.....+...+...+|.+.++. .. -|..||..+.+...- ..+ ....|.++...++|++.+++
T Consensus 539 ~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 539 NVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp GGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE
T ss_pred CCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc
Confidence 111123334444567655543 33 578889876654321 122 23568899999899887765
No 247
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.03 E-value=2.6e-06 Score=67.85 Aligned_cols=225 Identities=10% Similarity=0.014 Sum_probs=128.2
Q ss_pred CEEEEEeCCCcEEEEecCCccee-----eeeecCcccEEEEEECCCCCEEEE-eeCCCcEEEEecCCCEEEEEEeCCCCC
Q 020798 86 RFLVSASDDKTIRLWDVPTATCL-----KTLIGHTNYVFCVNFNPQSNMIVS-GAFDETVRIWDVKTGKCLKVLPAHSDP 159 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~wd~~~~~~~~~~~~~~~~ 159 (321)
++|+.+.. +.|+.+++...... ..+......+..++++++++.|+. ....+.|..+++........+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 44555443 47888887654321 111112235678999997666554 445789999998765443333333346
Q ss_pred eeEEEEccCCCEEE-EEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec---CCeEEEEeCCCCcEE
Q 020798 160 VTAVDFNRDGTMIV-TSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL---DNTLRLWNYSTGKIL 235 (321)
Q Consensus 160 v~~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~---d~~i~i~d~~~~~~~ 235 (321)
...+++.+++..++ +....+.|.++++.... ...+..........++++|++..|..+.. .+.|..+++.... .
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~ 158 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-R 158 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-C
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-c
Confidence 78999999765554 45567889999986433 22222222234678999997666655553 3688888875432 2
Q ss_pred EEEe-ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEE
Q 020798 236 KTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVK 314 (321)
Q Consensus 236 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~ 314 (321)
..+. ..... .....+.+..+.++++-...+.|.++|.........+.+... -.+++.. +..|..+..+ .+.|.
T Consensus 159 ~~~~~~~~~~--P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~-P~gi~~d--~~~lyva~~~-~~~v~ 232 (267)
T 1npe_A 159 RILAQDNLGL--PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY-PFAVTSY--GKNLYYTDWK-TNSVI 232 (267)
T ss_dssp EEEECTTCSC--EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS-EEEEEEE--TTEEEEEETT-TTEEE
T ss_pred EEEEECCCCC--CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCC-ceEEEEe--CCEEEEEECC-CCeEE
Confidence 2221 11111 122223322355566667788999999976544333333222 3566654 3344443333 46787
Q ss_pred Ecccc
Q 020798 315 IWTQE 319 (321)
Q Consensus 315 iw~~~ 319 (321)
.++.+
T Consensus 233 ~~d~~ 237 (267)
T 1npe_A 233 AMDLA 237 (267)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 77764
No 248
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.03 E-value=5.9e-08 Score=87.80 Aligned_cols=271 Identities=10% Similarity=0.066 Sum_probs=147.1
Q ss_pred EEEECC-CCCEEEEecCCc-----------eEEEeeccccCCCCCCCCCcccccc-cccccEEEEEECCCCCEEEEEeC-
Q 020798 28 SVKFSH-DGRLLASSSADK-----------TLLTYSLSSISNSDSTPPSPLQKFT-GHEQGVSDLVFSSDSRFLVSASD- 93 (321)
Q Consensus 28 ~~~~s~-~g~~l~~~~~d~-----------~v~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~~~~~~l~~~~~- 93 (321)
..++.| +|++++.|+.+. .+.+||.....- ..+..+. .+..-..++++..+++.++.|+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w------~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV------SDRTVTVTKHDMFCPGISMDGNGQIVVTGGND 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB------CCCEEEECSCCCSSCEEEECTTSCEEEECSSS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcE------EeCcccCCCCCCccccccCCCCCCEEEeCCCC
Confidence 456667 888888876543 466777654221 1111111 12222345677889999998884
Q ss_pred CCcEEEEecCCcceeeeeecCcc-cEEEEEECCCCCEEEEee-CC-----CcEEEEecCCCEEEEE-----EeCCCCCee
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTN-YVFCVNFNPQSNMIVSGA-FD-----ETVRIWDVKTGKCLKV-----LPAHSDPVT 161 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~d-----g~i~~wd~~~~~~~~~-----~~~~~~~v~ 161 (321)
+..+.+||..+.+....-.-+.. .-.+++..++++.++.|+ .+ ..+.+||..+++-... .+..... .
T Consensus 264 ~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~ 342 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-K 342 (656)
T ss_dssp TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-T
T ss_pred CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-c
Confidence 45899999887654322111111 112445667889888888 34 4689999987763322 0000000 0
Q ss_pred EEEEccCCCEEEEEeCCC---------eEEEEeCCCCceeeeeccCC--------CCCeEEEEEc-cCCCEEEEEecCC-
Q 020798 162 AVDFNRDGTMIVTSSYDG---------LCRIWDASTGHCMKTLIDDE--------NPPVSFVKFS-PNGKFILVGTLDN- 222 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~dg---------~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~-~~g~~l~~~~~d~- 222 (321)
...+..++..++.++.+| .+..||..+........... ...-..+.+. .++++++.|+.++
T Consensus 343 ~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 343 QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 112234455556665443 46778877654322111000 0112333443 3677788877532
Q ss_pred ----------eEEEEeCCCCcEEEEE--eccCCceeEEEeEEEecCCeEEEEeCCC-----------CeEEEEEcccceE
Q 020798 223 ----------TLRLWNYSTGKILKTY--TGHTNSKYCISSTFSVTNGKYIVSGSED-----------SCVYLWELQSRKV 279 (321)
Q Consensus 223 ----------~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----------g~i~vwd~~~~~~ 279 (321)
.+.+||..+....... ......... .....++++.++.|+.+ ..+.+||..+.+-
T Consensus 423 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~--~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W 500 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFH--TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF 500 (656)
T ss_dssp SSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSC--EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE
T ss_pred CCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccC--CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCce
Confidence 6888888776644332 111111111 11223588999988754 4689999877653
Q ss_pred EE--EecCCCCCeEEEEecCCCceEEEEee
Q 020798 280 VQ--KLEGHTDPVISVASHPTENIIASGAL 307 (321)
Q Consensus 280 ~~--~~~~h~~~v~~~~~~p~~~~l~s~~~ 307 (321)
.. .+......-....+.|++++++.||.
T Consensus 501 ~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 501 YKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 21 12111222234456789999999984
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.03 E-value=7.1e-07 Score=80.76 Aligned_cols=261 Identities=13% Similarity=0.179 Sum_probs=151.5
Q ss_pred CCEEEEecCCceEEEeeccccCCCCCCCC-CcccccccccccEEEEEECCCCCEEEEEeC------CCcEEEEecCCcce
Q 020798 35 GRLLASSSADKTLLTYSLSSISNSDSTPP-SPLQKFTGHEQGVSDLVFSSDSRFLVSASD------DKTIRLWDVPTATC 107 (321)
Q Consensus 35 g~~l~~~~~d~~v~~~~~~~~~~~~~~~~-~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~ 107 (321)
+..++.++.|+.+..+|..+......... .+..........+ + .++ .++++.. ++.|..+|..+++.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~----v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR----V-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKL 190 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE----E-ETT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE----E-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence 45677778888888887654321100000 0000000000111 1 133 4444432 58899999999987
Q ss_pred eeeeecC---c----------------------------ccEEEEEECCCCCEEEEeeCCC-------------------
Q 020798 108 LKTLIGH---T----------------------------NYVFCVNFNPQSNMIVSGAFDE------------------- 137 (321)
Q Consensus 108 ~~~~~~~---~----------------------------~~v~~~~~~~~~~~l~~~~~dg------------------- 137 (321)
+..+... . .....++++|+.+.++.+..++
T Consensus 191 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 191 AWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 6654311 0 0112367888888888777665
Q ss_pred cEEEEecCCCEEEEEEeC--CC-------CCeeEEEEccCCC---EEEEEeCCCeEEEEeCCCCceeeeeccCC------
Q 020798 138 TVRIWDVKTGKCLKVLPA--HS-------DPVTAVDFNRDGT---MIVTSSYDGLCRIWDASTGHCMKTLIDDE------ 199 (321)
Q Consensus 138 ~i~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~~~d~~~~~~~~~~~~~~------ 199 (321)
.|..+|.++++.+-.++. |. .+.....+..+++ .++.++.+|.++++|..+++.+.......
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 399999999998776654 22 2222233334564 58888999999999999988763221100
Q ss_pred -----CCC------------------------eEEEEEccCCCEEEEEe-------------------------------
Q 020798 200 -----NPP------------------------VSFVKFSPNGKFILVGT------------------------------- 219 (321)
Q Consensus 200 -----~~~------------------------~~~~~~~~~g~~l~~~~------------------------------- 219 (321)
..+ -..++++|+...+++..
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 000 01256777766655421
Q ss_pred -----cCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCe-EEE
Q 020798 220 -----LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPV-ISV 293 (321)
Q Consensus 220 -----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v-~~~ 293 (321)
.++.|..||+.+++.+-........ .. .... ..+.+++.++.||.|+.||.++++.+.+++...... .-+
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~-~~--~~~~-t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~ 506 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYPTHW-NG--GTLS-TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPM 506 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEESSSC-CC--CEEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCCCCC-cC--ceeE-eCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCce
Confidence 2378999999999987766543221 11 1111 246677888999999999999999988876543211 123
Q ss_pred EecCCCc-eEEEE
Q 020798 294 ASHPTEN-IIASG 305 (321)
Q Consensus 294 ~~~p~~~-~l~s~ 305 (321)
.+..+|+ +++.+
T Consensus 507 ~~~~~G~~yva~~ 519 (668)
T 1kv9_A 507 TFELAGRQYVAIM 519 (668)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEECCEEEEEEE
Confidence 3344665 44444
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.02 E-value=1.1e-07 Score=74.15 Aligned_cols=159 Identities=13% Similarity=0.178 Sum_probs=110.1
Q ss_pred EEEEEECCCCCEEEEEeCCC--cEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEE-eeCCCcEEEEecCCCEEEEE
Q 020798 76 VSDLVFSSDSRFLVSASDDK--TIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS-GAFDETVRIWDVKTGKCLKV 152 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~wd~~~~~~~~~ 152 (321)
...+.|+ ++.++.+++.+| .|+++|+.+++.+..+.... ..+...+.++++.|.. ...++.+.+||.++.+.+..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 3678888 666667777766 89999999999877765332 2333223334555544 44688999999999998888
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCC-C---CCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDE-N---PPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~---~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
++.... ...+++++..|+.+..++.+.++|..+.+....+.... . ..++.+.+. +|+..+..-.++.|.+.|
T Consensus 123 i~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 123 FNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred EECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 875332 22334567777777678899999999887776654321 1 224456665 676555444688999999
Q ss_pred CCCCcEEEEEec
Q 020798 229 YSTGKILKTYTG 240 (321)
Q Consensus 229 ~~~~~~~~~~~~ 240 (321)
..+++.+..+..
T Consensus 199 p~tG~V~~~Id~ 210 (262)
T 3nol_A 199 PETGKVTGIIDL 210 (262)
T ss_dssp TTTCBEEEEEEC
T ss_pred CCCCcEEEEEEC
Confidence 999999988864
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.99 E-value=7.3e-06 Score=75.93 Aligned_cols=277 Identities=15% Similarity=0.184 Sum_probs=163.5
Q ss_pred EEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc
Q 020798 26 ISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA 105 (321)
Q Consensus 26 v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 105 (321)
|.++...++|++.+ ++.++.+..|+....... ... ...+...|.++...+++.+.+ |+.++-+..||..++
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~------~~~-~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~ 245 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFE------KVI-PILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTK 245 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEE------ECC-----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTT
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEE------Eec-CCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCC
Confidence 78888888876554 555545777765331100 000 011245688888877777555 444444888998776
Q ss_pred ceeeeeec-------CcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeC-------CCCCeeEEEEccCCCE
Q 020798 106 TCLKTLIG-------HTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPA-------HSDPVTAVDFNRDGTM 171 (321)
Q Consensus 106 ~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~ 171 (321)
+....... ....|.++...++|...+ |..+ -|.+||..+++....... ....|.++...++|.+
T Consensus 246 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l 323 (795)
T 4a2l_A 246 EIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM 323 (795)
T ss_dssp EEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE
T ss_pred eEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE
Confidence 54322111 235689999988887554 4444 588899877764432211 2356889988888864
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeec-----cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc-----
Q 020798 172 IVTSSYDGLCRIWDASTGHCMKTLI-----DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH----- 241 (321)
Q Consensus 172 l~~~~~dg~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----- 241 (321)
-.|+.++-+..++..+........ .-....|.++..+++|.+ .+|+.++-|..||..+++........
T Consensus 324 -Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 401 (795)
T 4a2l_A 324 -WLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESAR 401 (795)
T ss_dssp -EEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------
T ss_pred -EEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCccc
Confidence 456666668888865543211110 012345788888888874 45777777999998776543322111
Q ss_pred CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec----CCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE----GHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
......+...+...++..|..|+.++-|..||..+++...... .+...|.++...+++++.+... + -+.+|+
T Consensus 402 ~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~---~-Gl~~~~ 477 (795)
T 4a2l_A 402 GIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL---S-ALVRFN 477 (795)
T ss_dssp CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES---S-CEEEEE
T ss_pred CCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec---C-ceeEEe
Confidence 0011123334444567635567776779999988765433211 1345789999988888766542 2 366666
Q ss_pred cc
Q 020798 318 QE 319 (321)
Q Consensus 318 ~~ 319 (321)
.+
T Consensus 478 ~~ 479 (795)
T 4a2l_A 478 PE 479 (795)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.99 E-value=1.4e-07 Score=85.39 Aligned_cols=231 Identities=11% Similarity=0.140 Sum_probs=141.1
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcc-cEEEEEECC--CCCEEEEeeC------CCcEEEEecCCCEEEEEEeC
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTN-YVFCVNFNP--QSNMIVSGAF------DETVRIWDVKTGKCLKVLPA 155 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~------dg~i~~wd~~~~~~~~~~~~ 155 (321)
+..++.++.|+.|..+|..+++.+........ ....+...| .+..++.+.. +|.|+.+|.++++.+-.+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 45678888999999999999987665543110 000011111 1345555543 58999999999988766542
Q ss_pred CC-C------------------------------CeeEEEEccCCCEEEEEeCCC-------------------eEEEEe
Q 020798 156 HS-D------------------------------PVTAVDFNRDGTMIVTSSYDG-------------------LCRIWD 185 (321)
Q Consensus 156 ~~-~------------------------------~v~~~~~~~~~~~l~~~~~dg-------------------~i~~~d 185 (321)
.. . ....+++.|+...++.+..++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 10 0 112467888888888887665 389999
Q ss_pred CCCCceeeeeccC-CC-------CCeEEEEEccCCC---EEEEEecCCeEEEEeCCCCcEEEEEeccCCc-eeEE-----
Q 020798 186 ASTGHCMKTLIDD-EN-------PPVSFVKFSPNGK---FILVGTLDNTLRLWNYSTGKILKTYTGHTNS-KYCI----- 248 (321)
Q Consensus 186 ~~~~~~~~~~~~~-~~-------~~~~~~~~~~~g~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~----- 248 (321)
.++++..-..... +. .+.....+..+|+ .++.++.+|.+.++|..+++++........+ ...+
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 9999876554322 11 2222233334665 6888899999999999999988544321100 0000
Q ss_pred ----------------------------EeEEEecCCeEEEE------------------------------------eC
Q 020798 249 ----------------------------SSTFSVTNGKYIVS------------------------------------GS 264 (321)
Q Consensus 249 ----------------------------~~~~~~~~~~~l~~------------------------------------~~ 264 (321)
...+. ++...+.. ..
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~d-p~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFN-PGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEE-TTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CccccccccccCCeeEECCCCccccCCCcceEC-CCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 01111 22222221 12
Q ss_pred CCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEcccc
Q 020798 265 EDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 265 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.+|.|..||+.+++.+.+...+ .+.........+.++..|+ .++.++.||.+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~--~dg~l~a~d~~ 487 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGT--AAGQMHAYSAD 487 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEEC--TTSEEEEEETT
T ss_pred ccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEEC--Ccccchhhhhh
Confidence 3488999999999988776643 2344444445677777775 56899999875
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.98 E-value=6.7e-06 Score=66.95 Aligned_cols=224 Identities=13% Similarity=0.034 Sum_probs=131.9
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC--CcEEEEecCCCEEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD--ETVRIWDVKTGKCLK 151 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~wd~~~~~~~~ 151 (321)
.....++|+++++++++-..++.|..||..... ...+ ........+++.++++.+++.... ..|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 346789999999977776678899999976542 2222 233467889999999866654332 247777777776543
Q ss_pred EEeCC-CCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce-eee--------eccCCCCCeEEEEEccCCCEEEEEe-c
Q 020798 152 VLPAH-SDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC-MKT--------LIDDENPPVSFVKFSPNGKFILVGT-L 220 (321)
Q Consensus 152 ~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-~~~--------~~~~~~~~~~~~~~~~~g~~l~~~~-~ 220 (321)
..... ......++..+++..+++...++.|..+|..++.. +.. .....-.....+ +++++.|.++. .
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 33221 12234455555554455544688999999865421 110 000111233445 78887766654 5
Q ss_pred CCeEEEEeCCC-CcE--EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceE--EEEecCCCCCeEEEEe
Q 020798 221 DNTLRLWNYST-GKI--LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV--VQKLEGHTDPVISVAS 295 (321)
Q Consensus 221 d~~i~i~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~ 295 (321)
.+.|..|++.. ++. ...+.....+ .. ....++|.++++....+.|.+++.. ++. +..+.......++++|
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~~~~P-~g---i~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~ 262 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVEQTNI-DD---FAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAF 262 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEESCCC-SS---EEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEE
T ss_pred CCEEEEEEeCCCCCCCccEEEeccCCC-CC---eEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEE
Confidence 67899999864 321 1111111111 11 2223678877777778899999975 544 2233333356799999
Q ss_pred c---CCCceEEEEe
Q 020798 296 H---PTENIIASGA 306 (321)
Q Consensus 296 ~---p~~~~l~s~~ 306 (321)
. |+++.|..+.
T Consensus 263 ~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 263 GQTEGDCTAIYVVT 276 (306)
T ss_dssp CCSTTTTTEEEEEE
T ss_pred ecccCCCCEEEEEC
Confidence 8 8866554443
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.97 E-value=7.3e-07 Score=69.66 Aligned_cols=157 Identities=10% Similarity=0.041 Sum_probs=110.9
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEE--EEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE
Q 020798 76 VSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVF--CVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL 153 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 153 (321)
...+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ - ....+ .+++.. +..+.....++.+.+||.++.+.+..+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 3577786 3566678888899999999999887776 2 22333 355543 234445567889999999999999888
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCC----CCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN----PPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
+.... -..++ +++..|+.+..++.+.++|..+.+....+..... ..++.+.|. +|+..+....++.|.+.|.
T Consensus 133 ~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 133 RYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp ECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred eCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 75332 23444 5677888777799999999999887766543221 134556665 6765544446789999999
Q ss_pred CCCcEEEEEec
Q 020798 230 STGKILKTYTG 240 (321)
Q Consensus 230 ~~~~~~~~~~~ 240 (321)
.+++.+..+..
T Consensus 209 ~TG~V~~~Idl 219 (268)
T 3nok_A 209 ATGTVVGVIDA 219 (268)
T ss_dssp TTCBEEEEEEC
T ss_pred CCCcEEEEEEC
Confidence 99999988864
No 255
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=2.8e-07 Score=80.27 Aligned_cols=186 Identities=13% Similarity=0.113 Sum_probs=123.5
Q ss_pred CCCEEEEee-CCCcEEEEecCCCEEEEEEeCC-CCCeeEEEE-c-cCCCEEEEEe------------------CCCeEEE
Q 020798 126 QSNMIVSGA-FDETVRIWDVKTGKCLKVLPAH-SDPVTAVDF-N-RDGTMIVTSS------------------YDGLCRI 183 (321)
Q Consensus 126 ~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~~------------------~dg~i~~ 183 (321)
||++++.+. .+..|.+.|+.+.++...+... ......+++ . |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 777776655 4567999999999987744432 245778887 4 8999888874 3457899
Q ss_pred EeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC--------------------------------------eEE
Q 020798 184 WDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN--------------------------------------TLR 225 (321)
Q Consensus 184 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~--------------------------------------~i~ 225 (321)
.|..+.+...++....+ ...++++|+|+++++.+.+. .+.
T Consensus 180 ID~~t~~v~~qI~Vgg~--pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeCCC--ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99998877776654332 35678999999999887543 366
Q ss_pred EEeCCC--CcE-EEEEeccCCceeEEEeEEEecCCeEEE-EeCCCCeEEEEEcccce------------EEEEecCCCCC
Q 020798 226 LWNYST--GKI-LKTYTGHTNSKYCISSTFSVTNGKYIV-SGSEDSCVYLWELQSRK------------VVQKLEGHTDP 289 (321)
Q Consensus 226 i~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~------------~~~~~~~h~~~ 289 (321)
+.|.++ ++. +..+.....+. ++ ...|||++++ ++..+.+|.++|+.+.+ .+..+..- ..
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~Ph-Gv---~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~g 332 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPH-GC---NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LG 332 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCC-CE---EECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SC
T ss_pred EEeCcccCCceeEEEEecCCCce-EE---EEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CC
Confidence 666665 333 33443222211 12 2347887655 45578899999998653 33444322 34
Q ss_pred eEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 290 VISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 290 v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
-+.++|+|+|...++.- -++.|..|+.++
T Consensus 333 P~h~aF~~dG~aY~t~~--ldsqV~kwdi~~ 361 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLF--LDSQVVKWNIED 361 (595)
T ss_dssp EEEEEECTTSEEEEEET--TTTEEEEEEHHH
T ss_pred cceEEECCCCeEEEEEe--cCCcEEEEEhhH
Confidence 58999999994444443 347899999864
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.95 E-value=1.2e-06 Score=77.62 Aligned_cols=259 Identities=12% Similarity=0.120 Sum_probs=149.4
Q ss_pred CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccc--cEEE-EEECCCCCEEEEEeC------CCcEEEEecCCc
Q 020798 35 GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQ--GVSD-LVFSSDSRFLVSASD------DKTIRLWDVPTA 105 (321)
Q Consensus 35 g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~--~i~~-~~~~~~~~~l~~~~~------d~~i~iwd~~~~ 105 (321)
+..++.++.|+.+..+|..+...... .....+.. .+.+ ... .++ .++.++. ++.|..+|..++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~------~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWE------VEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEE------EECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEE------ecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCC
Confidence 45677777788888877643221100 00011100 1110 011 134 4555544 789999999998
Q ss_pred ceeeeeecCccc--------------------------------------EEEEEECCCCCEEEEeeCC-----------
Q 020798 106 TCLKTLIGHTNY--------------------------------------VFCVNFNPQSNMIVSGAFD----------- 136 (321)
Q Consensus 106 ~~~~~~~~~~~~--------------------------------------v~~~~~~~~~~~l~~~~~d----------- 136 (321)
+.+..+...... ...+++.++...++.+..+
T Consensus 187 ~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~g 266 (571)
T 2ad6_A 187 ELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPG 266 (571)
T ss_dssp CEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCS
T ss_pred cEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCC
Confidence 876554321100 0124566666666655432
Q ss_pred -----CcEEEEecCCCEEEEEEeCC--C--------CCeeEEEEccCCC---EEEEEeCCCeEEEEeCCCCceeeeeccC
Q 020798 137 -----ETVRIWDVKTGKCLKVLPAH--S--------DPVTAVDFNRDGT---MIVTSSYDGLCRIWDASTGHCMKTLIDD 198 (321)
Q Consensus 137 -----g~i~~wd~~~~~~~~~~~~~--~--------~~v~~~~~~~~~~---~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 198 (321)
+.|..+|.++++.+-.++.. . .++ -+...++|+ .++.++.+|.+.++|..+++.+......
T Consensus 267 d~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 267 DNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp CCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred CceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence 35899999999877666532 1 222 122234664 5677889999999999998766443211
Q ss_pred C------------CCCe--------------------------EEEEEccCCCEEEEEe---------------------
Q 020798 199 E------------NPPV--------------------------SFVKFSPNGKFILVGT--------------------- 219 (321)
Q Consensus 199 ~------------~~~~--------------------------~~~~~~~~g~~l~~~~--------------------- 219 (321)
. ..++ ..++++|+...+++..
T Consensus 346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~ 425 (571)
T 2ad6_A 346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV 425 (571)
T ss_dssp TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccc
Confidence 1 0011 2356788777776653
Q ss_pred ----------------cCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 220 ----------------LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 220 ----------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
.++.|..||+.+++.+-.+...... .. .... ..+..++.++.||.|+.||.++++.+.++
T Consensus 426 g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~-~~--~~~~-t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAA-WG--GTLY-TKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCC-CS--BCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCc-cc--eeEE-ECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 2478999999999987776532211 11 1111 23455666899999999999999999887
Q ss_pred cCCCCC-eEEEEecCCCceEEEEe
Q 020798 284 EGHTDP-VISVASHPTENIIASGA 306 (321)
Q Consensus 284 ~~h~~~-v~~~~~~p~~~~l~s~~ 306 (321)
+..... -.-+.+..+++.++...
T Consensus 502 ~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 502 KMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp ECSSCCCSCCEEEEETTEEEEEEE
T ss_pred eCCCCcEeeeEEEEECCEEEEEEE
Confidence 643211 12233556777666543
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.94 E-value=4.8e-06 Score=67.85 Aligned_cols=209 Identities=9% Similarity=0.105 Sum_probs=122.1
Q ss_pred CcceeeeeccCCcccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEE
Q 020798 11 RPYTLTQTLNGHLRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVS 90 (321)
Q Consensus 11 ~~~~~~~~~~~h~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~ 90 (321)
.+.++...+... .....++|+|+|+++++-..++.|..++.... ....+ .-...+..+++.++|+++++
T Consensus 20 ~~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~---------~~~~~-~~~~~p~gia~~~dG~l~va 88 (306)
T 2p4o_A 20 APAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN---------QQIHA-TVEGKVSGLAFTSNGDLVAT 88 (306)
T ss_dssp CCEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC---------EEEEE-ECSSEEEEEEECTTSCEEEE
T ss_pred CCceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc---------eEEEE-eCCCCceeEEEcCCCcEEEE
Confidence 344455555432 45678999999997777767888888865321 11111 11245788999999996665
Q ss_pred EeCCC--cEEEEecCCcceeeeee-cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEE-EEEEe---------CCC
Q 020798 91 ASDDK--TIRLWDVPTATCLKTLI-GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKC-LKVLP---------AHS 157 (321)
Q Consensus 91 ~~~d~--~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-~~~~~---------~~~ 157 (321)
..... .|..++..+++...... ........++..+++..+++...++.|+++|...++. +.... ..-
T Consensus 89 d~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 89 GWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred eccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence 54332 46667777766432211 1122234455555554455544688999999876531 11110 011
Q ss_pred CCeeEEEEccCCCEEEE-EeCCCeEEEEeCCC-Cce--eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCc
Q 020798 158 DPVTAVDFNRDGTMIVT-SSYDGLCRIWDAST-GHC--MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGK 233 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~-~~~dg~i~~~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~ 233 (321)
.....+ +|+++.++. -...+.|..+|+.. +.. ...+... .....++++++|+++++....+.|.++|.. ++
T Consensus 169 ~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~ 243 (306)
T 2p4o_A 169 PAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS 243 (306)
T ss_dssp CSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC
T ss_pred CcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC
Confidence 123444 778775554 45678999999864 321 1111111 224568899999877766667889999965 65
Q ss_pred EE
Q 020798 234 IL 235 (321)
Q Consensus 234 ~~ 235 (321)
..
T Consensus 244 ~~ 245 (306)
T 2p4o_A 244 TT 245 (306)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 258
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=2e-06 Score=73.58 Aligned_cols=240 Identities=13% Similarity=0.170 Sum_probs=136.4
Q ss_pred cEEEEEECC-CCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC-CC----cEEEEecCCCE
Q 020798 75 GVSDLVFSS-DSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF-DE----TVRIWDVKTGK 148 (321)
Q Consensus 75 ~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg----~i~~wd~~~~~ 148 (321)
....|+++| ++..|+.+...+.|+.+|+..+... .+.........++++++++.|+.+.. .+ .+.+++....-
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 456889998 4555665555478999998876543 33334455789999999996665554 22 23334432211
Q ss_pred E-EEEEeCCCCCeeEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEE
Q 020798 149 C-LKVLPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLR 225 (321)
Q Consensus 149 ~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~ 225 (321)
. ...+.. ......++++| ++.++++-..++.|..++...+................++++|+|++|..+. ..+.|.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 0 122221 23346788999 6776666667889999998866542222222223457899999999655554 567899
Q ss_pred EEeCCC--CcE--EEEEecc---CCc---------eeEEE-eEEEe--------cCCeEEEEeCCCCeEEEEEcccceEE
Q 020798 226 LWNYST--GKI--LKTYTGH---TNS---------KYCIS-STFSV--------TNGKYIVSGSEDSCVYLWELQSRKVV 280 (321)
Q Consensus 226 i~d~~~--~~~--~~~~~~~---~~~---------~~~~~-~~~~~--------~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (321)
.++... ++. +..+.+. .+. ..... ..+.. .++.++++-...+.|+.++. .++..
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~ 374 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVT 374 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEE
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEE
Confidence 987643 221 1222211 000 00011 12221 23566666566778888883 44432
Q ss_pred EEec-------C----------CCCCeEEEEecCC-CceEEEEeecCCccEEEcccc
Q 020798 281 QKLE-------G----------HTDPVISVASHPT-ENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 281 ~~~~-------~----------h~~~v~~~~~~p~-~~~l~s~~~d~~~~i~iw~~~ 319 (321)
.... + .-..-..+++.|+ +.++++-. .+.+|+..+.|
T Consensus 375 ~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~--~n~rIr~i~~e 429 (430)
T 3tc9_A 375 TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR--ENRRIRKIGYE 429 (430)
T ss_dssp EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG--GGTEEEEEEEC
T ss_pred EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC--CCCeEEEEccC
Confidence 2211 1 0113589999995 66665533 34678888776
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.90 E-value=2.4e-06 Score=75.87 Aligned_cols=163 Identities=16% Similarity=0.222 Sum_probs=101.0
Q ss_pred CcEEEEecCCCEEEEEEeC--CC--------CCeeEEEEc-cCCC---EEEEEeCCCeEEEEeCCCCceeeeeccCC---
Q 020798 137 ETVRIWDVKTGKCLKVLPA--HS--------DPVTAVDFN-RDGT---MIVTSSYDGLCRIWDASTGHCMKTLIDDE--- 199 (321)
Q Consensus 137 g~i~~wd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--- 199 (321)
+.|..+|.++++.+-.++. |. .++. +... .+|+ .++.++.+|.++++|.++++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5799999999988766643 21 1221 2221 4563 67788999999999999887654332111
Q ss_pred ---------CCC--------------------------------eEEEEEccCCCEEEEEe-------------------
Q 020798 200 ---------NPP--------------------------------VSFVKFSPNGKFILVGT------------------- 219 (321)
Q Consensus 200 ---------~~~--------------------------------~~~~~~~~~g~~l~~~~------------------- 219 (321)
..+ -..++++|+...+++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 000 01245666554444432
Q ss_pred --------------cCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC
Q 020798 220 --------------LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 220 --------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
.++.|..||+.+++.+-+....... .. .... ..+.+++.|+.||.++.||.++++.+.+++.
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~-~~--g~~~-tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPL-WA--GVLA-TAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCC-CS--CCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCC-cc--cceE-eCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 2578999999999987666533211 10 0111 2355677799999999999999999988875
Q ss_pred CCCCe-EEEEecCCCceEEE
Q 020798 286 HTDPV-ISVASHPTENIIAS 304 (321)
Q Consensus 286 h~~~v-~~~~~~p~~~~l~s 304 (321)
....+ .-+.+..+|+..++
T Consensus 526 ~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 526 GSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp SSCCCSCCEEEEETTEEEEE
T ss_pred CCCcccCceEEEECCEEEEE
Confidence 43221 12556678875444
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.89 E-value=1.8e-06 Score=66.82 Aligned_cols=157 Identities=13% Similarity=0.092 Sum_probs=107.9
Q ss_pred EEEEEECCCCCEEEEEeCCC--cEEEEecCCcceeeeeecCccc-EEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEE
Q 020798 76 VSDLVFSSDSRFLVSASDDK--TIRLWDVPTATCLKTLIGHTNY-VFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 76 i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~ 151 (321)
...+.|++ +.++.+.+.+| .|+.+|+.+++.+..+...... --.+++. ++.| .....++.+.+||.++.+.+.
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 55788886 56666666654 8999999999987766432221 1233333 4444 445578899999999999998
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCC----CCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDEN----PPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
.++..... ..++ +++..|+.+..++.|.++|..+.+...++..... ..++.+.+. +|+.++..-.+..|.+.
T Consensus 100 ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 100 RFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEE
Confidence 88754322 3444 5677777777789999999998877666543211 234455554 66655444467899999
Q ss_pred eCCCCcEEEEEe
Q 020798 228 NYSTGKILKTYT 239 (321)
Q Consensus 228 d~~~~~~~~~~~ 239 (321)
|.++++.+..+.
T Consensus 176 Dp~tG~V~~~id 187 (243)
T 3mbr_X 176 DPASGKVVAWID 187 (243)
T ss_dssp CTTTCBEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 999999998886
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.87 E-value=2.6e-06 Score=75.67 Aligned_cols=206 Identities=15% Similarity=0.185 Sum_probs=125.4
Q ss_pred CCCcEEEEecCCcceeeeeecCccc-------------------------------------E-EEEEECCCCCEEEEee
Q 020798 93 DDKTIRLWDVPTATCLKTLIGHTNY-------------------------------------V-FCVNFNPQSNMIVSGA 134 (321)
Q Consensus 93 ~d~~i~iwd~~~~~~~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~ 134 (321)
.++.|+.+|..+++.+-.+...... + ...++.++.+.++.+.
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3789999999999876544321110 0 1345566777777665
Q ss_pred CC----------------CcEEEEecCCCEEEEEEeCCC----------CCeeEEEEc-cCC---CEEEEEeCCCeEEEE
Q 020798 135 FD----------------ETVRIWDVKTGKCLKVLPAHS----------DPVTAVDFN-RDG---TMIVTSSYDGLCRIW 184 (321)
Q Consensus 135 ~d----------------g~i~~wd~~~~~~~~~~~~~~----------~~v~~~~~~-~~~---~~l~~~~~dg~i~~~ 184 (321)
.+ +.|..+|.++++.+-.++... .++. +... .+| ..++.++.+|.+.++
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~l 338 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTL 338 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEE
Confidence 54 379999999998876655322 1221 2222 456 457778899999999
Q ss_pred eCCCCceeeeeccCC------------CCCe--------------------------EEEEEccCCCEEEEEe-------
Q 020798 185 DASTGHCMKTLIDDE------------NPPV--------------------------SFVKFSPNGKFILVGT------- 219 (321)
Q Consensus 185 d~~~~~~~~~~~~~~------------~~~~--------------------------~~~~~~~~g~~l~~~~------- 219 (321)
|.++++.+....... ..++ ..++++|+..++++..
T Consensus 339 D~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~ 418 (599)
T 1w6s_A 339 DRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDW 418 (599)
T ss_dssp ETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred ECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceee
Confidence 999988664432110 0000 1345666655554421
Q ss_pred --------------------------------cCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC
Q 020798 220 --------------------------------LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS 267 (321)
Q Consensus 220 --------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 267 (321)
..+.|..||+.+++.+-....... .. ..... ..+.+++.++.||
T Consensus 419 ~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~-~~--~g~~~-tagg~vf~gt~dg 494 (599)
T 1w6s_A 419 EPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA-VW--GGTMA-TAGDLVFYGTLDG 494 (599)
T ss_dssp EECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC-CC--SBCEE-ETTTEEEEECTTS
T ss_pred ecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC-cc--CcceE-ecCCEEEEECCCC
Confidence 346899999999988776642211 11 00011 2355666789999
Q ss_pred eEEEEEcccceEEEEecCCCCCe-EEEEecCCCceEE
Q 020798 268 CVYLWELQSRKVVQKLEGHTDPV-ISVASHPTENIIA 303 (321)
Q Consensus 268 ~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~p~~~~l~ 303 (321)
.++.||.++++.+.+++.....+ .-+.+..+|+..+
T Consensus 495 ~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 495 YLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYV 531 (599)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred eEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEE
Confidence 99999999999998876433211 2244556776433
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.85 E-value=2.5e-05 Score=64.87 Aligned_cols=206 Identities=6% Similarity=-0.063 Sum_probs=124.4
Q ss_pred ccEEEEEECCCCCEEE-EEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEE
Q 020798 74 QGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~ 151 (321)
..+..++|++.+..|+ +-...+.|..+++........+.........+++.+.++.| ++-...+.|.+.++.......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 3478899997655554 55567889999987665333222222345678888765554 555566789999986543333
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEE-eCC-CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEe
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTS-SYD-GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWN 228 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~-~~d-g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d 228 (321)
.+...-.....+++.|.+..++.+ ... +.|..+++.... ...+..........++++|++..|..+. ..+.|..+|
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 333333556889999866555544 444 778888876432 2233222233467899998776666654 467899999
Q ss_pred CCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEec
Q 020798 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE 284 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 284 (321)
+........+.........++. .++..+.+-...+.|..++..+++....+.
T Consensus 232 ~dG~~~~~~~~~~~~~P~giav----~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 232 LDGSHRKAVISQGLPHPFAITV----FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TTSCSCEEEECSSCSSEEEEEE----ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCceEEEEeCCCCCceEEEE----ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 7654333333222222233332 356677777778888888865555444443
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=3.2e-05 Score=71.45 Aligned_cols=274 Identities=9% Similarity=0.100 Sum_probs=159.0
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCc-ccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSP-LQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~-~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
...|.++...++|. |..|+.++.|..++.............. ...-......|.++...++|++. .|+.++-|..|+
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~ 389 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFE 389 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEE
Confidence 45789999988886 5566666677777654211100000000 00001123568999998888744 566556688898
Q ss_pred cCCcceeeee---ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe--CCCCCeeEEEEccCCCEEEEEe
Q 020798 102 VPTATCLKTL---IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP--AHSDPVTAVDFNRDGTMIVTSS 176 (321)
Q Consensus 102 ~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 176 (321)
..++...... ......|.++...++++..+ |..++-+..+|.++++...... .....|.++...+++.+. .++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw-igt 467 (781)
T 3v9f_A 390 NGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW-IGT 467 (781)
T ss_dssp TTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE-EEE
T ss_pred CCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE-EEE
Confidence 7655322111 12345688888888776544 6666678889987775433221 234578888888777644 455
Q ss_pred CCCeEEEEeCCCCceeeeeccC----CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC-CceeEEEeE
Q 020798 177 YDGLCRIWDASTGHCMKTLIDD----ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHT-NSKYCISST 251 (321)
Q Consensus 177 ~dg~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~ 251 (321)
. +-+..+|..+++........ ....+..+...++|.+.+ |+.++-|..||..+++. ..+.... -+...+...
T Consensus 468 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i 544 (781)
T 3v9f_A 468 H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQI 544 (781)
T ss_dssp T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEE
T ss_pred C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEE
Confidence 5 45788888765433221111 124578888888887554 55544488898766543 3343211 111223334
Q ss_pred EEecCCeEEEEeCCCCeEEEEEcccceEEEEec---C-CCCCeEEEEecCCCceEEEE
Q 020798 252 FSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLE---G-HTDPVISVASHPTENIIASG 305 (321)
Q Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~-h~~~v~~~~~~p~~~~l~s~ 305 (321)
+...+|.+.++ +.+|.|..||..+++.. .+. + ....|.++...++|++.+++
T Consensus 545 ~~d~~g~lWi~-T~~Glv~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 545 YRSSKGQMWLA-TGEGLVCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp EECTTSCEEEE-ETTEEEEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred EECCCCCEEEE-ECCCceEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEEc
Confidence 44456665554 44666588887765432 222 2 23468889888888887765
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.80 E-value=1e-06 Score=79.75 Aligned_cols=243 Identities=11% Similarity=0.120 Sum_probs=135.8
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEecCCcceee--eee-cCcccEEEEEECCCCCEEEEeeC-CCcEEE
Q 020798 78 DLVFSS-DSRFLVSASDDK-----------TIRLWDVPTATCLK--TLI-GHTNYVFCVNFNPQSNMIVSGAF-DETVRI 141 (321)
Q Consensus 78 ~~~~~~-~~~~l~~~~~d~-----------~i~iwd~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~ 141 (321)
..++.+ +++.++.|+.+. .+.+||..+++... .+. .+.....++++.+++..++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 455666 888888887543 58889988775322 221 12233335677888999998884 458999
Q ss_pred EecCCCEEEEEEeCCCCC-eeEEEEccCCCEEEEEe-CC-----CeEEEEeCCCCceeeeec---cCCCCCeEEEEEccC
Q 020798 142 WDVKTGKCLKVLPAHSDP-VTAVDFNRDGTMIVTSS-YD-----GLCRIWDASTGHCMKTLI---DDENPPVSFVKFSPN 211 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~-~d-----g~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~ 211 (321)
||..+++-...-..+... -.+++..+++++++.|+ .+ ..+.+||..+..-...-. ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 999877533321112111 23456667899988888 34 468899988764322100 000000000112234
Q ss_pred CCEEEEEecC---------CeEEEEeCCCCcEEEEEeccCC-------ceeEEEeEEEecCCeEEEEeCCCC--------
Q 020798 212 GKFILVGTLD---------NTLRLWNYSTGKILKTYTGHTN-------SKYCISSTFSVTNGKYIVSGSEDS-------- 267 (321)
Q Consensus 212 g~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~dg-------- 267 (321)
+..++.++.+ ..+..||..+............ ........+...++++++.|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 4444555443 4578888877654432221110 011122223234788888888543
Q ss_pred ---eEEEEEcccceEEEEe--cCCCCCe-EEEEecCCCceEEEEeecCC---------ccEEEccccc
Q 020798 268 ---CVYLWELQSRKVVQKL--EGHTDPV-ISVASHPTENIIASGALDND---------RTVKIWTQEK 320 (321)
Q Consensus 268 ---~i~vwd~~~~~~~~~~--~~h~~~v-~~~~~~p~~~~l~s~~~d~~---------~~i~iw~~~~ 320 (321)
.|.+||..+..-.... .-+.... .+.+..|++++++.|+.+.. ..+.+||.+.
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 6778887765433222 1122222 34566789999999986421 4588888753
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.79 E-value=1.1e-05 Score=68.92 Aligned_cols=239 Identities=13% Similarity=0.154 Sum_probs=135.8
Q ss_pred cEEEEEECCC--CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC---C-cEEEEecCCCE
Q 020798 75 GVSDLVFSSD--SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD---E-TVRIWDVKTGK 148 (321)
Q Consensus 75 ~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g-~i~~wd~~~~~ 148 (321)
....++|+|+ +..|+.+...+.|+.+|..+++.. .+.........++++++++.+++.... . .+...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4568999984 334444433388999998777643 333344557899999999944443311 1 13333322111
Q ss_pred E-EEEEeCCCCCeeEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeeecc-CCCCCeEEEEEccCCCEEEEEe-cCCeE
Q 020798 149 C-LKVLPAHSDPVTAVDFNR-DGTMIVTSSYDGLCRIWDASTGHCMKTLID-DENPPVSFVKFSPNGKFILVGT-LDNTL 224 (321)
Q Consensus 149 ~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~-~d~~i 224 (321)
. ...+. .......++++| ++.++++-..++.|+.+|..++.....+.. ........++++|+|++|..+. ..+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 0 01121 123346688999 676666666778999999886654222221 1222234699999999665554 56789
Q ss_pred EEEeCC--CCcE--EEEEecc---CC----------ceeEEEeEEE--------ecCCeEEEEeCCCCeEEEEEcccceE
Q 020798 225 RLWNYS--TGKI--LKTYTGH---TN----------SKYCISSTFS--------VTNGKYIVSGSEDSCVYLWELQSRKV 279 (321)
Q Consensus 225 ~i~d~~--~~~~--~~~~~~~---~~----------~~~~~~~~~~--------~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (321)
..++.. ++.. ...+.+. .+ ........+. ..++.++++-...+.|+.++. .+..
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 998764 2321 1122221 00 0001112221 355677777777888999885 4433
Q ss_pred EEEecCC------------------CCCeEEEEec-CCCceEEEEeecCCccEEEcccc
Q 020798 280 VQKLEGH------------------TDPVISVASH-PTENIIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 280 ~~~~~~h------------------~~~v~~~~~~-p~~~~l~s~~~d~~~~i~iw~~~ 319 (321)
. .+.+. -..-.+|++. +++.++++=. .+.+|+..++|
T Consensus 377 ~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~--~n~rIr~i~~e 432 (433)
T 4hw6_A 377 T-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC--DNHRVRKIAPE 432 (433)
T ss_dssp E-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG--GGTEEEEEEEC
T ss_pred E-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC--CCCEEEEEecC
Confidence 2 22211 1235789999 6677666543 35688888876
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.79 E-value=2.5e-06 Score=78.41 Aligned_cols=194 Identities=10% Similarity=0.066 Sum_probs=109.2
Q ss_pred cEEEEEEC-CCCCEEEEEeC-CC----cEEEEecCCc-ceeeeeecCcccEEEEEECCCCCEEEEeeCC-----CcEEEE
Q 020798 75 GVSDLVFS-SDSRFLVSASD-DK----TIRLWDVPTA-TCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIW 142 (321)
Q Consensus 75 ~i~~~~~~-~~~~~l~~~~~-d~----~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~w 142 (321)
.+....|| |||++|+.+.. +| .|+++|+.++ +.+.... ......+.|+||++.|+....+ ..|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~--~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV--SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE--EEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc--cCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57789999 99998875533 33 4999999988 5321100 1113467899999888776654 258888
Q ss_pred ecCCCEE--EEEEe-CCCCCeeEEEEccCCCEEEEEeC---CCeEEEEeCCCCc-ee--eeeccCCCCCeEEEEEccCCC
Q 020798 143 DVKTGKC--LKVLP-AHSDPVTAVDFNRDGTMIVTSSY---DGLCRIWDASTGH-CM--KTLIDDENPPVSFVKFSPNGK 213 (321)
Q Consensus 143 d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~-~~--~~~~~~~~~~~~~~~~~~~g~ 213 (321)
++.++.. ...+. ........+.|+||++.|+.... ...+.++|+.++. .. ..+..........+.|+. |.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~ 331 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TS 331 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CC
Confidence 8876531 22222 22234567899999998776552 3468888987652 12 333322233333444443 55
Q ss_pred EEE-EEecC----CeEEEEeCCCC-cEEE-EEeccCCceeEEEeEEEecCCeEEEEeCCCCeE--EEEEc
Q 020798 214 FIL-VGTLD----NTLRLWNYSTG-KILK-TYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCV--YLWEL 274 (321)
Q Consensus 214 ~l~-~~~~d----~~i~i~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i--~vwd~ 274 (321)
.|+ .+..+ ..|..+|+.++ +... .+. +.... .+.. +...++.++++...+|.. .++++
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~-~~~~~-~l~~-~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVD-HSEDV-FMES-IAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEEC-CCSSE-EEEE-EEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEEC-CCCCc-EEEE-EEEECCEEEEEEEeCCEEEEEEEec
Confidence 444 44333 36777777642 2112 222 22211 1221 222345666777777754 45564
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.77 E-value=4.3e-05 Score=64.37 Aligned_cols=216 Identities=6% Similarity=-0.059 Sum_probs=128.4
Q ss_pred ccEEEEEECCCCCEE-EEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEE
Q 020798 74 QGVSDLVFSSDSRFL-VSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~ 151 (321)
..+..++|++.+..| .+-...+.|..+++........+.........+++++.+..| ++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 457889999755544 455567889999987665333222222334567888765554 455556788888876543333
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEe-CC-CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEe
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSS-YD-GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWN 228 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d 228 (321)
.+.........+++.|.+..|+.+. .. +.|..++..... ...+..........++++|++..|..+. ..+.|..+|
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 3333335568899998766555544 44 678888876432 2233222233467899998766666554 467899999
Q ss_pred CCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEE
Q 020798 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVA 294 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~ 294 (321)
+........+.........++. ..+..+.+....+.|..++..+++.+..+........+++
T Consensus 275 ~dG~~~~~~~~~~~~~P~giav----~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~ 336 (386)
T 3v65_B 275 LDGSHRKAVISQGLPHPFAITV----FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH 336 (386)
T ss_dssp TTSCSCEEEECSSCSSEEEEEE----ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEE
T ss_pred CCCCeeEEEEECCCCCceEEEE----ECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEE
Confidence 7654333333222222233332 3566777777888899888666655554443323334443
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.77 E-value=8.6e-06 Score=72.25 Aligned_cols=155 Identities=14% Similarity=0.052 Sum_probs=95.9
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcc-cEEEEEECC--CCCEEEEeeC------CCcEEEEecCCCEEEEEEeC
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTN-YVFCVNFNP--QSNMIVSGAF------DETVRIWDVKTGKCLKVLPA 155 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~------dg~i~~wd~~~~~~~~~~~~ 155 (321)
+..++.++.|+.+..+|..+++.+........ .-..+.-+| .+..++.++. ++.|+.+|.++++.+-.+..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 45677888899999999999987655432110 000011111 1345555544 78999999999987765543
Q ss_pred CCCC--------------------------------------eeEEEEccCCCEEEEEeCC----------------CeE
Q 020798 156 HSDP--------------------------------------VTAVDFNRDGTMIVTSSYD----------------GLC 181 (321)
Q Consensus 156 ~~~~--------------------------------------v~~~~~~~~~~~l~~~~~d----------------g~i 181 (321)
.... ...+++.++...++.+..+ +.+
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 2110 0135666666666665532 358
Q ss_pred EEEeCCCCceeeeeccCC--------CCCeEEEEEccCCC---EEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 182 RIWDASTGHCMKTLIDDE--------NPPVSFVKFSPNGK---FILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~---~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
..+|.++++..-...... ......+....+|+ .++.++.+|.+.++|..+++++..+.
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 999999988765543221 01111223334774 56778889999999999999887664
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.77 E-value=0.00012 Score=67.78 Aligned_cols=285 Identities=12% Similarity=0.072 Sum_probs=162.1
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCC------CcccccccccccEEEEEECCCCCEEEEEeCCCcE
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPP------SPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTI 97 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~------~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i 97 (321)
..|.++...++|.+ ..|+..+.+..++............ .+..........|.++...++|. |-.|+.++-|
T Consensus 258 ~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl 335 (781)
T 3v9f_A 258 SYIFSIKQLKDNKL-WIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGI 335 (781)
T ss_dssp CCEEEEEECTTSEE-EEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCE
T ss_pred ceEEEEEECCCCCE-EEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeE
Confidence 46888888888764 4455545677777643221110000 00000112346799999998887 4456666678
Q ss_pred EEEecCCcceeeee---------ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE---eCCCCCeeEEEE
Q 020798 98 RLWDVPTATCLKTL---------IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL---PAHSDPVTAVDF 165 (321)
Q Consensus 98 ~iwd~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~---~~~~~~v~~~~~ 165 (321)
..++.......... ......|.++...++++. ..|+.++-|..||..++...... ......|.++..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 414 (781)
T 3v9f_A 336 NFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLK 414 (781)
T ss_dssp EEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEE
T ss_pred EEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEE
Confidence 88887655422110 012356889988887764 44555566888887654322211 123356888888
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeec-cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc--C
Q 020798 166 NRDGTMIVTSSYDGLCRIWDASTGHCMKTLI-DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH--T 242 (321)
Q Consensus 166 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~ 242 (321)
.+++.+. .|+.++-+..+|..+++...... ......+..+...++|.+. .|+. +-|..||..+++........ .
T Consensus 415 d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~ 491 (781)
T 3v9f_A 415 DSEGNLW-FGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNSQ 491 (781)
T ss_dssp CTTSCEE-EEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEECTTTSS
T ss_pred CCCCCEE-EEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecccCcccc
Confidence 7777654 46766678889887665332211 1123457788888877644 4555 56899998776544332221 0
Q ss_pred CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecC----CCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 243 NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEG----HTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
.....+.......+|.+.+ |+..+-|..||..+++.. .+.. ....|.++...++|.+.++.. +|.|..|+.
T Consensus 492 ~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~---~Glv~~~d~ 566 (781)
T 3v9f_A 492 LLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLATG---EGLVCFPSA 566 (781)
T ss_dssp CSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEET---TEEEEESCT
T ss_pred cccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEEC---CCceEEECC
Confidence 0011233344445666554 444334777887665433 2321 235789999988988776542 354467765
Q ss_pred c
Q 020798 319 E 319 (321)
Q Consensus 319 ~ 319 (321)
+
T Consensus 567 ~ 567 (781)
T 3v9f_A 567 R 567 (781)
T ss_dssp T
T ss_pred C
Confidence 4
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.76 E-value=2.9e-05 Score=60.91 Aligned_cols=202 Identities=12% Similarity=0.166 Sum_probs=125.6
Q ss_pred eeccCCcccEEEEEECCCCCEEE-EecCCceEEEeeccccCCCCCCCCCcccccc-cccccEEEEEECCCCCEEEEEeCC
Q 020798 17 QTLNGHLRAISSVKFSHDGRLLA-SSSADKTLLTYSLSSISNSDSTPPSPLQKFT-GHEQGVSDLVFSSDSRFLVSASDD 94 (321)
Q Consensus 17 ~~~~~h~~~v~~~~~s~~g~~l~-~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~~~~~~l~~~~~d 94 (321)
+.+.|-...++.++|+|++..|+ +...++.|...|... ..++.+. +-......|++.+++.++++.-.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g---------~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNG---------DLIRTIPLDFVKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTC---------CEEEEEECSSCSSEEEEEECSTTEEEEEETTT
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCC---------CEEEEEecCCCCChHHeEEeCCCEEEEEECCC
Confidence 56777778899999999876554 566677777776541 1222221 112456788899988877766667
Q ss_pred CcEEEEecCCccee---eeee------cCcccEEEEEECCCCCEEEEeeCCCcEEEEecC---CCEEEEEEe-------C
Q 020798 95 KTIRLWDVPTATCL---KTLI------GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK---TGKCLKVLP-------A 155 (321)
Q Consensus 95 ~~i~iwd~~~~~~~---~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~---~~~~~~~~~-------~ 155 (321)
+.+.++++.....+ .... ..+.....++++|.++.|+++.......+|.++ ....+..+. .
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence 78989887654321 1111 123446899999999887777665555555543 111111111 1
Q ss_pred CCCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeeccC--------CCCCeEEEEEccCCCEEEEEecCCeEEE
Q 020798 156 HSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLIDD--------ENPPVSFVKFSPNGKFILVGTLDNTLRL 226 (321)
Q Consensus 156 ~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~~~~~d~~i~i 226 (321)
+.....+++++|... +++.......+..+|... +....+.-. .-+....+++.++|+..+ .++.+.+..
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~ 248 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYR 248 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEE
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEE
Confidence 234568999999755 555666777888898764 333332211 123567899999998554 466676776
Q ss_pred EeC
Q 020798 227 WNY 229 (321)
Q Consensus 227 ~d~ 229 (321)
|..
T Consensus 249 f~~ 251 (255)
T 3qqz_A 249 FTP 251 (255)
T ss_dssp EEC
T ss_pred EEe
Confidence 653
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.74 E-value=2e-06 Score=78.98 Aligned_cols=194 Identities=13% Similarity=0.111 Sum_probs=108.9
Q ss_pred cEEEEEEC-CCCCEEEEecC-----CceEEEeecccc-CCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC---
Q 020798 25 AISSVKFS-HDGRLLASSSA-----DKTLLTYSLSSI-SNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD--- 94 (321)
Q Consensus 25 ~v~~~~~s-~~g~~l~~~~~-----d~~v~~~~~~~~-~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d--- 94 (321)
.+...+|| |||++||.+.. ...|.++++.+. ... + ..+. .....+.|+|||+.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l---~----~~~~---~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI---A----DKVS---GTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC---C----CCEE---EECSCCEECSSTTEEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC---C----cccc---CceeeEEEecCCCEEEEEEECCCC
Confidence 67889999 99998885432 235888887653 210 0 1111 123468899999888776654
Q ss_pred --CcEEEEecCCccee--eeee-cCcccEEEEEECCCCCEEEEee---CCCcEEEEecCCC--EE--EEEEeCCCCCeeE
Q 020798 95 --KTIRLWDVPTATCL--KTLI-GHTNYVFCVNFNPQSNMIVSGA---FDETVRIWDVKTG--KC--LKVLPAHSDPVTA 162 (321)
Q Consensus 95 --~~i~iwd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~---~dg~i~~wd~~~~--~~--~~~~~~~~~~v~~ 162 (321)
..|.++++.++... ..+. ........+.|+|||++|+... ....|+++|+.++ +. ............+
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 25788888775421 1111 2233456789999999877654 2346888898765 22 2223333445566
Q ss_pred EEEccCCCEEEEEeCC----CeEEEEeCCCCceeee-eccCCCCCeEEEEEccCCCEE-EEEecCCe--EEEEeC
Q 020798 163 VDFNRDGTMIVTSSYD----GLCRIWDASTGHCMKT-LIDDENPPVSFVKFSPNGKFI-LVGTLDNT--LRLWNY 229 (321)
Q Consensus 163 ~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~l-~~~~~d~~--i~i~d~ 229 (321)
+.|+..+.+++....+ ..|..+|+.++..... +... ...+..-.+.+.+..| ++...++. |.++|+
T Consensus 325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-SEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-CSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-CCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 6655444444444443 2566677764322222 2222 2222222333444554 45556664 566665
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.70 E-value=4.4e-05 Score=59.85 Aligned_cols=201 Identities=12% Similarity=0.172 Sum_probs=127.0
Q ss_pred eeecCcccEEEEEECCCCCEEE-EeeCCCcEEEEecCCCEEEEEEeCC-CCCeeEEEEccCCCEEEEEeCCCeEEEEeCC
Q 020798 110 TLIGHTNYVFCVNFNPQSNMIV-SGAFDETVRIWDVKTGKCLKVLPAH-SDPVTAVDFNRDGTMIVTSSYDGLCRIWDAS 187 (321)
Q Consensus 110 ~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~ 187 (321)
.+.+-...+..++++|+++.|+ +...++.|...|.. ++....++.. ......+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3445555789999999877655 46778889999987 7777766532 2457789999888776766677888888875
Q ss_pred CCce---eeeec-----cCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC---CCcEEEEEec-------cCCceeEEE
Q 020798 188 TGHC---MKTLI-----DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS---TGKILKTYTG-------HTNSKYCIS 249 (321)
Q Consensus 188 ~~~~---~~~~~-----~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~---~~~~~~~~~~-------~~~~~~~~~ 249 (321)
.... ..... ...+.....++++|.++.|+++.......+|.+. ....+..... +..... .
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S--~ 177 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS--G 177 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC--E
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCce--e
Confidence 4321 12221 1234456899999999888877766555555543 1111222211 011111 2
Q ss_pred eEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC---------CCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 250 STFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT---------DPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~---------~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
..+.+..+++++.....+.|.++|.. ++.+..+.-.. ..-..+++.|+|++.++ ++ ...++.+.
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE--~n~~y~f~ 250 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SE--PNRFYRFT 250 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ET--TTEEEEEE
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cC--CceEEEEE
Confidence 23445678888888888999999976 44544432211 24479999999998887 43 34455444
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.69 E-value=1.8e-05 Score=70.29 Aligned_cols=198 Identities=15% Similarity=0.144 Sum_probs=122.4
Q ss_pred CCEEEEEeC-CCcEEEEec-CCcceeeeeecCcc-----------cEEEEEECCCCCE----EEEeeCCCcEEEEecCCC
Q 020798 85 SRFLVSASD-DKTIRLWDV-PTATCLKTLIGHTN-----------YVFCVNFNPQSNM----IVSGAFDETVRIWDVKTG 147 (321)
Q Consensus 85 ~~~l~~~~~-d~~i~iwd~-~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~----l~~~~~dg~i~~wd~~~~ 147 (321)
+..+++++. ++.|.-+|. .+++.+-+...... ....+++.|.+.. ++.++.|+.+..+|.+++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 345666666 788888998 88877654432111 0123455444444 788888999999999999
Q ss_pred EEEEEEeCCCC----CeeE-EEEccCCCEEEEEe------CCCeEEEEeCCCCceeeeeccCCCC---------------
Q 020798 148 KCLKVLPAHSD----PVTA-VDFNRDGTMIVTSS------YDGLCRIWDASTGHCMKTLIDDENP--------------- 201 (321)
Q Consensus 148 ~~~~~~~~~~~----~v~~-~~~~~~~~~l~~~~------~dg~i~~~d~~~~~~~~~~~~~~~~--------------- 201 (321)
+.+-....... .+.+ ..+ .++ .+++++ .++.|+.+|.++++.+-+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 87765543220 1111 111 134 455544 3789999999998876543221100
Q ss_pred ----------------------CeEEEEEccCCCEEEEEecC----------------CeEEEEeCCCCcEEEEEeccCC
Q 020798 202 ----------------------PVSFVKFSPNGKFILVGTLD----------------NTLRLWNYSTGKILKTYTGHTN 243 (321)
Q Consensus 202 ----------------------~~~~~~~~~~g~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~~~ 243 (321)
.-...++.+....++.+..+ +.|..+|..+++.+-.++....
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 00134566777777777655 3799999999999887764321
Q ss_pred ce-------eEEEeEEEecCC---eEEEEeCCCCeEEEEEcccceEEEEec
Q 020798 244 SK-------YCISSTFSVTNG---KYIVSGSEDSCVYLWELQSRKVVQKLE 284 (321)
Q Consensus 244 ~~-------~~~~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~ 284 (321)
.. ..+.......+| ..++.++.+|.++++|..+++++....
T Consensus 300 d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 300 DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 10 111111111356 577889999999999999999876553
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.66 E-value=0.00012 Score=61.85 Aligned_cols=216 Identities=8% Similarity=-0.025 Sum_probs=129.6
Q ss_pred cccEEEEEECCCCCEEE-EEeCCCcEEEEecCCc----ceeeeeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCC
Q 020798 73 EQGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTA----TCLKTLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKT 146 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~ 146 (321)
...+..++|++.+..|+ +-...+.|..+++... .....+.........+++.+.++ .+++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 45678999998655554 4456678888888652 12222222334567888988544 445555678899999876
Q ss_pred CEEEEEEeCCCCCeeEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCe
Q 020798 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY--DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNT 223 (321)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~ 223 (321)
......+.........+++.|.+..|+.+.. .+.|...++.... ...+....-.....+++++++..|..+. ..+.
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~-~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc-cEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 5444444434455789999997666655542 3678888876433 2233222234567899998777776665 4678
Q ss_pred EEEEeCCCCcEEEEEecc--CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEE
Q 020798 224 LRLWNYSTGKILKTYTGH--TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISV 293 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 293 (321)
|..+|+............ ......++ . ..+..+.+....+.|..+|..+++.+..+........++
T Consensus 270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~--v--~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i 337 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEKRLAHPFSLA--V--FEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDM 337 (400)
T ss_dssp EEEEETTSCCCEEEEECSSTTSSEEEEE--E--ETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEE
T ss_pred EEEEeCCCCccEEEEeCCCCCCCCEEEE--E--eCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceE
Confidence 999998654333323221 12222232 2 356667777778889999976766555444333333444
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.66 E-value=4.3e-05 Score=65.29 Aligned_cols=152 Identities=9% Similarity=0.062 Sum_probs=91.2
Q ss_pred cEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC-CC----cEE
Q 020798 25 AISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD-DK----TIR 98 (321)
Q Consensus 25 ~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~-d~----~i~ 98 (321)
....++++| ++..|..+...+.|..++..... +..+.........++|++++++|+.+.. ++ .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~---------v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY---------VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNY 208 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE---------EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE---------EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEE
Confidence 456789998 45556555544777777664311 1122223455789999999996665543 22 233
Q ss_pred EEecCCccee--eeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecCCCEEEEEEeCC-CCCeeEEEEccCCCEE-E
Q 020798 99 LWDVPTATCL--KTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVKTGKCLKVLPAH-SDPVTAVDFNRDGTMI-V 173 (321)
Q Consensus 99 iwd~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l-~ 173 (321)
..+. .+... ..+. .......++++| ++..+++-...+.|+.++...+......... ......++|+|+++.| +
T Consensus 209 ~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 209 ILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp EEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred EEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 3332 22211 1221 122345778999 6666666667789999998877643322221 2345789999999954 4
Q ss_pred EEeCCCeEEEEeCC
Q 020798 174 TSSYDGLCRIWDAS 187 (321)
Q Consensus 174 ~~~~dg~i~~~d~~ 187 (321)
+-...+.|..++..
T Consensus 287 ~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 287 VVVNQHYILRSDYD 300 (430)
T ss_dssp EETTTTEEEEEEEE
T ss_pred EECCCCEEEEEeCC
Confidence 55567888887754
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.64 E-value=8.1e-05 Score=63.62 Aligned_cols=201 Identities=11% Similarity=0.077 Sum_probs=111.1
Q ss_pred ccEEEEEECCC--CCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCC---Cc-E
Q 020798 24 RAISSVKFSHD--GRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDD---KT-I 97 (321)
Q Consensus 24 ~~v~~~~~s~~--g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d---~~-i 97 (321)
.....++|+|+ +..|+.+...+.|+.++..... +..+.........++++++|+++++.... .. +
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~---------v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY---------VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGI 209 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTE---------EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCE---------EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceE
Confidence 34568899985 3344444433777777653211 11222233457899999999944443321 11 3
Q ss_pred EEEecCCcceeeeeecCcccEEEEEECC-CCCEEEEeeCCCcEEEEecCCCEEEE-EEeCCC-CCeeEEEEccCCCEEE-
Q 020798 98 RLWDVPTATCLKTLIGHTNYVFCVNFNP-QSNMIVSGAFDETVRIWDVKTGKCLK-VLPAHS-DPVTAVDFNRDGTMIV- 173 (321)
Q Consensus 98 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~~-~~v~~~~~~~~~~~l~- 173 (321)
...+...................++++| ++..+++-..++.|+.+|..++.... .+.... .....++|+|+++.|+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 210 YLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp EEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEE
T ss_pred EEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEE
Confidence 3333221111001111123345678899 66666666677889999988676522 222211 2234699999998554
Q ss_pred EEeCCCeEEEEeCC--CCce--eeeeccC--------------CCCCeEEEEE---------ccCCCEEEEEecCCeEEE
Q 020798 174 TSSYDGLCRIWDAS--TGHC--MKTLIDD--------------ENPPVSFVKF---------SPNGKFILVGTLDNTLRL 226 (321)
Q Consensus 174 ~~~~dg~i~~~d~~--~~~~--~~~~~~~--------------~~~~~~~~~~---------~~~g~~l~~~~~d~~i~i 226 (321)
+-...+.|+.++.. ++.. ...+... .-.....+++ .++|.++++-...+.|+.
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~ 369 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRV 369 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEE
Confidence 45567889997764 2221 0111110 0112456888 677776666566788999
Q ss_pred EeCCCCcE
Q 020798 227 WNYSTGKI 234 (321)
Q Consensus 227 ~d~~~~~~ 234 (321)
++. ++..
T Consensus 370 ~~~-~G~v 376 (433)
T 4hw6_A 370 LTP-EGRV 376 (433)
T ss_dssp ECT-TSEE
T ss_pred ECC-CCCE
Confidence 984 5543
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.60 E-value=0.00014 Score=59.38 Aligned_cols=205 Identities=9% Similarity=-0.009 Sum_probs=122.0
Q ss_pred ccEEEEEECCCCCEE-EEEeCCCcEEEEecCCc---ceeeee-ecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCC
Q 020798 74 QGVSDLVFSSDSRFL-VSASDDKTIRLWDVPTA---TCLKTL-IGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTG 147 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~ 147 (321)
..+..++|++.+..| .+-...+.|..+++... .....+ .........+++++.++.| ++-...+.|.+.++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 456789999865544 45556688999998751 222222 2122345678888755544 55466788999998754
Q ss_pred EEEEEEeCCCCCeeEEEEccCCCEEEEEeC-C-CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeE
Q 020798 148 KCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-D-GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTL 224 (321)
Q Consensus 148 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i 224 (321)
.....+.........+++.|.+..++.+.. . +.|..+++... ....+....-.....+++++++..|..+. ..+.|
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 433333333456789999986665555543 3 67888887543 23333222234567899998877776655 45789
Q ss_pred EEEeCCCCcEEEEEecc--CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 225 RLWNYSTGKILKTYTGH--TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 225 ~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
..+|+............ ......++. ..+..+.+-...+.|..++..+++.+..+
T Consensus 189 ~~~d~dg~~~~~~~~~~~~~~~P~giav----~~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 189 SSIDVNGGNRKTILEDEKRLAHPFSLAV----FEDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEE----ETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEecCCCceEEEeecCCccCCcEEEEE----ECCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 99998643322222211 112223322 24677777778889999997666544444
No 278
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.56 E-value=0.00019 Score=61.80 Aligned_cols=242 Identities=16% Similarity=0.168 Sum_probs=138.0
Q ss_pred cEEEEEECCC-CCEEE-EEeCCCcEEEEecCCcceeeeeec---CcccEEEEEE-------CCCCCEEEEeeCCC-----
Q 020798 75 GVSDLVFSSD-SRFLV-SASDDKTIRLWDVPTATCLKTLIG---HTNYVFCVNF-------NPQSNMIVSGAFDE----- 137 (321)
Q Consensus 75 ~i~~~~~~~~-~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~dg----- 137 (321)
....|+|+|. +..|+ +....+.|++.|+..+........ .......++| +++++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568999983 44444 444446788899888765433221 1234789999 99999666665543
Q ss_pred --cEEEEecCC-CEEE-----EEEeCCCCCeeEEEEccC-CCEEEEEeCCCeEEEEeCC-------CCce----------
Q 020798 138 --TVRIWDVKT-GKCL-----KVLPAHSDPVTAVDFNRD-GTMIVTSSYDGLCRIWDAS-------TGHC---------- 191 (321)
Q Consensus 138 --~i~~wd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~-------~~~~---------- 191 (321)
.+.+++... +... ..+... .....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665333 1111 122211 23457788995 5555566678889999987 4432
Q ss_pred -eeeec-cCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeC--CCCcE--EEEEecc---CC---------c-eeEEEeE
Q 020798 192 -MKTLI-DDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNY--STGKI--LKTYTGH---TN---------S-KYCISST 251 (321)
Q Consensus 192 -~~~~~-~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~--~~~~~--~~~~~~~---~~---------~-~~~~~~~ 251 (321)
...+. .........++++|+|+.|..+. ....|+.++. ..+.. ...+.+. .+ . .......
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 11211 12223356899999999655554 5678888664 33321 1222221 00 0 0011022
Q ss_pred EEe-------cCCeEEEEeCCCCeEEEEEcccceEEEEecCC------------------------CCCeEEEEecCC-C
Q 020798 252 FSV-------TNGKYIVSGSEDSCVYLWELQSRKVVQKLEGH------------------------TDPVISVASHPT-E 299 (321)
Q Consensus 252 ~~~-------~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h------------------------~~~v~~~~~~p~-~ 299 (321)
+.. .++.++++-..+.+|+.++. ++. +..+.+. -..-.+|++.++ +
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 222 35667777777888999983 443 2233211 123468999997 7
Q ss_pred ceEEEEeecCCccEEEcccccC
Q 020798 300 NIIASGALDNDRTVKIWTQEKE 321 (321)
Q Consensus 300 ~~l~s~~~d~~~~i~iw~~~~~ 321 (321)
.++++=. .+.+|+.++++.+
T Consensus 457 ~lyVaD~--~N~rIrki~~~~~ 476 (496)
T 3kya_A 457 MFYVHDQ--VGHTIRTISMEQE 476 (496)
T ss_dssp EEEEEET--TTTEEEEEEECCC
T ss_pred EEEEEeC--CCCEEEEEECCCC
Confidence 7666533 4578999888754
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.50 E-value=0.00068 Score=62.27 Aligned_cols=208 Identities=9% Similarity=-0.035 Sum_probs=124.8
Q ss_pred cccEEEEEECCCCC-EEEEEeCCCcEEEEecCCc----ceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCC
Q 020798 73 EQGVSDLVFSSDSR-FLVSASDDKTIRLWDVPTA----TCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKT 146 (321)
Q Consensus 73 ~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~ 146 (321)
...+..|+|.+.+. ++++-...+.|+.+++... .....+.........|++.+.++.| ++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 35577899988544 4455556678888888653 1122222223345678888877555 4555678899999875
Q ss_pred CEEEEEEeCCCCCeeEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCe
Q 020798 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY--DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNT 223 (321)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~ 223 (321)
......+.........|++.|.+..|+.+.. .+.|...++.... ...+....-.....+++++.+..|+.+. ..+.
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 5444444444456789999997666655543 3678888876433 3333333334567899998776766664 4568
Q ss_pred EEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 224 LRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 224 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
|..+++..................+.... ..+.++++-...+.|...+..+++.+..+
T Consensus 582 I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 99999865444333332211111222222 24566667677788888887666544444
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.49 E-value=9.7e-05 Score=60.26 Aligned_cols=185 Identities=14% Similarity=0.298 Sum_probs=114.8
Q ss_pred CCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC----CC---EEEEEe-C--CCeEEEEeC--CCCceee
Q 020798 126 QSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD----GT---MIVTSS-Y--DGLCRIWDA--STGHCMK 193 (321)
Q Consensus 126 ~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~-~--dg~i~~~d~--~~~~~~~ 193 (321)
....++.....+-+.+||+ +++.++.++. ..+..+...|+ ++ ++++.. . ++++.+|++ .++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456666677788999999 7887877753 56677776663 22 223333 3 578999966 3333 33
Q ss_pred eecc---C--CC-CCeEEEEE--ccC-CC-EEEEEecCCeEEEEeCC-------CCcEEEEEeccCCceeEEEeEEEecC
Q 020798 194 TLID---D--EN-PPVSFVKF--SPN-GK-FILVGTLDNTLRLWNYS-------TGKILKTYTGHTNSKYCISSTFSVTN 256 (321)
Q Consensus 194 ~~~~---~--~~-~~~~~~~~--~~~-g~-~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (321)
.+.. . .. ..+..+++ +|. ++ ++++...++.+..|++. +.++++.+...... ..+...+.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~----EgcvvDd~ 190 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQT----EGMAADDE 190 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCE----EEEEEETT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCc----ceEEEcCC
Confidence 3311 0 11 23344555 664 54 67778888999999872 33567777654432 23344455
Q ss_pred CeEEEEeCCCCeEEEEEcc-----cceEEEEec-CC-CCCeEEEEe--cCCCc-eEEEEeecCCccEEEcccc
Q 020798 257 GKYIVSGSEDSCVYLWELQ-----SRKVVQKLE-GH-TDPVISVAS--HPTEN-IIASGALDNDRTVKIWTQE 319 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~-----~~~~~~~~~-~h-~~~v~~~~~--~p~~~-~l~s~~~d~~~~i~iw~~~ 319 (321)
...|+.+-++.-|..++.+ +++++..+. ++ ...+..|++ .++++ +|++.+.+ +.+..+|+.+
T Consensus 191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG-~~s~~Vydr~ 262 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG-NSSYAIYDRQ 262 (355)
T ss_dssp TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG-GTEEEEEESS
T ss_pred CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC-CCEEEEEECC
Confidence 6677888888666666654 345665553 22 246888887 56666 67776654 5688899875
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.49 E-value=0.00018 Score=63.96 Aligned_cols=156 Identities=12% Similarity=0.105 Sum_probs=96.5
Q ss_pred CCEEEEEeCCCcEEEEecCCcceeeeeecCcc----cEE---EEEEC-CCCC-EEEEee------CCCcEEEEecCCCEE
Q 020798 85 SRFLVSASDDKTIRLWDVPTATCLKTLIGHTN----YVF---CVNFN-PQSN-MIVSGA------FDETVRIWDVKTGKC 149 (321)
Q Consensus 85 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~v~---~~~~~-~~~~-~l~~~~------~dg~i~~wd~~~~~~ 149 (321)
+..++.++.|+.|..+|..+++.+........ .+. .+.-. .+++ .+++++ .++.|+.+|.++++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45677788999999999999987655432210 010 11111 1222 566654 378999999999987
Q ss_pred EEEEeCCCCC-----------------------------------------eeEEEEccCCCEEEEEeC-----------
Q 020798 150 LKVLPAHSDP-----------------------------------------VTAVDFNRDGTMIVTSSY----------- 177 (321)
Q Consensus 150 ~~~~~~~~~~-----------------------------------------v~~~~~~~~~~~l~~~~~----------- 177 (321)
+-..+..... -..+++.|....++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 6554321100 013456666667766552
Q ss_pred ---------C----CeEEEEeCCCCceeeeeccC-CC-------CCeEEEEEc-cCCC---EEEEEecCCeEEEEeCCCC
Q 020798 178 ---------D----GLCRIWDASTGHCMKTLIDD-EN-------PPVSFVKFS-PNGK---FILVGTLDNTLRLWNYSTG 232 (321)
Q Consensus 178 ---------d----g~i~~~d~~~~~~~~~~~~~-~~-------~~~~~~~~~-~~g~---~l~~~~~d~~i~i~d~~~~ 232 (321)
| +.|..+|.++++..-..... +. .....+... .+|+ .++.++.+|.+.++|..++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 58999999999876554322 11 111112222 4674 6778899999999999999
Q ss_pred cEEEEEec
Q 020798 233 KILKTYTG 240 (321)
Q Consensus 233 ~~~~~~~~ 240 (321)
+++..+..
T Consensus 357 ~~lw~~~~ 364 (582)
T 1flg_A 357 KLQNAFPF 364 (582)
T ss_dssp CEEEEEES
T ss_pred CEeccccc
Confidence 98876643
No 282
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.49 E-value=0.00033 Score=58.05 Aligned_cols=232 Identities=8% Similarity=0.025 Sum_probs=130.3
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEe-eCCCcEEEEecCCCEEEEEEeC
Q 020798 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG-AFDETVRIWDVKTGKCLKVLPA 155 (321)
Q Consensus 77 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~ 155 (321)
.|.+..++. +|+.+ ....|+..++........+. ....+..++|++..+.|+.+ ...+.|+.+++........+..
T Consensus 37 ~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 37 SCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp CEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred cccccccCc-eeEee-cccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 444555533 44433 34568888887655433332 23346789999876665544 4668899999876543333333
Q ss_pred CCCCeeEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cC-CeEEEEeCCCC
Q 020798 156 HSDPVTAVDFNRDGT-MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LD-NTLRLWNYSTG 232 (321)
Q Consensus 156 ~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d-~~i~i~d~~~~ 232 (321)
.......+++.+.+. ++++-...+.|.+.++.... ...+..........++++|.+..|+.+. .. +.|..+++...
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 334457889887554 44555567889999987543 2233322334467899998666555544 34 77888887643
Q ss_pred cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCcc
Q 020798 233 KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~ 312 (321)
.. ..+.. ..........+.+.++.+.++-...+.|..+++........+......-.++++. .+.++++-. ..+.
T Consensus 193 ~~-~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~--~~~~ 267 (349)
T 3v64_C 193 GR-RIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDW--HTKS 267 (349)
T ss_dssp SC-EESCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEET--TTTE
T ss_pred Cc-EEEEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecC--CCCe
Confidence 22 22211 1111122223333456666666777899999986543322233333345677773 444444432 2345
Q ss_pred EEEcc
Q 020798 313 VKIWT 317 (321)
Q Consensus 313 i~iw~ 317 (321)
|...+
T Consensus 268 V~~~~ 272 (349)
T 3v64_C 268 INSAN 272 (349)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 283
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.47 E-value=0.00042 Score=58.31 Aligned_cols=232 Identities=8% Similarity=0.020 Sum_probs=132.2
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEE-EeeCCCcEEEEecCCCEEEEEEeC
Q 020798 77 SDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIV-SGAFDETVRIWDVKTGKCLKVLPA 155 (321)
Q Consensus 77 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~ 155 (321)
.+.+..++ .+|+.+ ....|+..++.......... .......++|++.++.|+ +-...+.|+.+++........+..
T Consensus 80 ~C~~~~~~-~~l~~~-~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 80 SCKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp CEEECSSC-CEEEEE-CBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred eECCcccc-ceeEee-cCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 34444443 344433 44678888887665433332 334577899998666555 445668899999876654443333
Q ss_pred CCCCeeEEEEccCCCE-EEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-C-CeEEEEeCCCC
Q 020798 156 HSDPVTAVDFNRDGTM-IVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-D-NTLRLWNYSTG 232 (321)
Q Consensus 156 ~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d-~~i~i~d~~~~ 232 (321)
.......+++.+.+.. +++-...+.|.+.++.... ...+..........++++|.+..|+.+.. . +.|..+++...
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 3334567888875554 4555567788888876543 22333233345678999987666655543 3 67888887643
Q ss_pred cEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEEeecCCcc
Q 020798 233 KILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASGALDNDRT 312 (321)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~ 312 (321)
........... ......+.+.++.+.++-...+.|..+++........+......-.++++. .+.++++-. ..+.
T Consensus 236 ~~~~~~~~~~~--~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~--~~~~ 310 (386)
T 3v65_B 236 GRRIIADTHLF--WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDW--HTKS 310 (386)
T ss_dssp SCEEEECSSCS--CEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEET--TTTE
T ss_pred CcEEEEECCCC--CeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeC--CCCe
Confidence 33222221111 122223333456666666778899999986543322233333345777773 444455432 3455
Q ss_pred EEEcc
Q 020798 313 VKIWT 317 (321)
Q Consensus 313 i~iw~ 317 (321)
|..++
T Consensus 311 V~~~~ 315 (386)
T 3v65_B 311 INSAN 315 (386)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66555
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.43 E-value=0.00042 Score=56.58 Aligned_cols=204 Identities=5% Similarity=-0.040 Sum_probs=122.0
Q ss_pred cEEEEEECCCC-CEEEEEeCCCcEEEEecCCcceee-eeecCcccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCEEEE
Q 020798 75 GVSDLVFSSDS-RFLVSASDDKTIRLWDVPTATCLK-TLIGHTNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 75 ~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~ 151 (321)
....++|.+.+ +++.+-...+.|..+++....... .+...-.....+++.+.+.. +++-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 46688998854 444555667889999887653211 11111223557888875554 4555566789999986543222
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEe--CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEe
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSS--YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWN 228 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d 228 (321)
...........+++.|.+..++.+. ..+.|...+..... ...+....-.....+++++++..|..+. ..+.|..+|
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 2323345568899998766665555 35778888876432 2233222233467899999776666654 467899999
Q ss_pred CCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
+..................++. ..+..+.+-...+.|..++..+++....+
T Consensus 195 ~dG~~~~~~~~~~~~~P~glav----~~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 195 LDGTNRQAVVKGSLPHPFALTL----FEDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TTSCSCEEEECSCCSCEEEEEE----ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCceEEEecCCCCCceEEEE----eCCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 8643322222222222233322 24566667777889999998766544443
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.42 E-value=0.00046 Score=56.62 Aligned_cols=276 Identities=8% Similarity=0.054 Sum_probs=138.9
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccc-ccccccccEEEEEECCCCCEEEEEeCCCcEEEEe
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQ-KFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD 101 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~-~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 101 (321)
...+.++.|.+++..+++| ..+.+.. ........ ..+. ........+..+.+.+ ++.++ ++..+.|.. .
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i~~-s~DgG~tW-----~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S 104 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATLME-TRDGGQTW-----EPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-T 104 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEEEE-ESSTTSSC-----EECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-E
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeEEE-eCCCCCCC-----eECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-E
Confidence 3578999998888877755 4665432 22111110 1110 0111234678888876 44444 455664433 3
Q ss_pred cCCcceeeeee---cCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE-eCCCCCeeEEEEccCCCEEEEEeC
Q 020798 102 VPTATCLKTLI---GHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL-PAHSDPVTAVDFNRDGTMIVTSSY 177 (321)
Q Consensus 102 ~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~ 177 (321)
.+.++...... .+...+..+.+.+++..++.+ .++.|..- ...++.-... ......+..+++.|++..++.+..
T Consensus 105 ~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 182 (327)
T 2xbg_A 105 TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSR 182 (327)
T ss_dssp SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETT
T ss_pred CCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECC
Confidence 33333322221 123446677776666555544 45554321 1223222222 234456889999998887766654
Q ss_pred CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc-CCceeEEEeEEEecC
Q 020798 178 DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH-TNSKYCISSTFSVTN 256 (321)
Q Consensus 178 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 256 (321)
.+..+-.|.. +..-..+.......+..+.+.++++.+ +++.+|.+.+.+...++.-..+... ......+......++
T Consensus 183 G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 183 GSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp SSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS
T ss_pred CcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC
Confidence 4444444421 111111112233457788888988765 4556787777642223322222111 001111222223345
Q ss_pred CeEEEEeCCCCeEEEEEcccceEEEEec---CCCCCeEEEEecCCCceEEEEeecCCccEEEcc
Q 020798 257 GKYIVSGSEDSCVYLWELQSRKVVQKLE---GHTDPVISVASHPTENIIASGALDNDRTVKIWT 317 (321)
Q Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~ 317 (321)
+..++++. +|.| ++....++.-..+. .+...+.++.|.+++..++.| ++|.|.-++
T Consensus 261 ~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G---~~G~i~~~~ 319 (327)
T 2xbg_A 261 NEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG---QKGILLRYV 319 (327)
T ss_dssp SCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC---STTEEEEEC
T ss_pred CEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc---CCceEEEEc
Confidence 66666554 6766 34544454433333 234567889887677666665 357776554
No 286
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.41 E-value=0.00054 Score=56.81 Aligned_cols=223 Identities=15% Similarity=0.134 Sum_probs=117.4
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcce--eeeee---cCcccEEEEEECCC---CCEEEEeeC-C-----CcEE
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC--LKTLI---GHTNYVFCVNFNPQ---SNMIVSGAF-D-----ETVR 140 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~i~ 140 (321)
....++|.|+|++++ +...+.|.+++ .++. +..+. .-......++++|+ +..|+.+.. . ..|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 467899999998555 45669999998 3321 11111 11345788999998 555544432 2 5677
Q ss_pred EEecCCCE-----E-EEEEeC---CCCCeeEEEEccCCCEEEEEeC-------------CCeEEEEeCCCC---------
Q 020798 141 IWDVKTGK-----C-LKVLPA---HSDPVTAVDFNRDGTMIVTSSY-------------DGLCRIWDASTG--------- 189 (321)
Q Consensus 141 ~wd~~~~~-----~-~~~~~~---~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~~d~~~~--------- 189 (321)
.++...+. . ...++. .......++|.|+|.++++.+. .|.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 88876431 1 112331 1123468999999976666432 145555554421
Q ss_pred ---ceeeeeccCCCCCeEEEEEcc-CCCEEEEEecCCe--------EEEEeCCC----------------CcEEEEEecc
Q 020798 190 ---HCMKTLIDDENPPVSFVKFSP-NGKFILVGTLDNT--------LRLWNYST----------------GKILKTYTGH 241 (321)
Q Consensus 190 ---~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~~--------i~i~d~~~----------------~~~~~~~~~~ 241 (321)
.....+.... .....++|+| +|.++++-...+. |.+..... ..++..+..+
T Consensus 189 ~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 267 (352)
T 2ism_A 189 RRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQG 267 (352)
T ss_dssp CTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCC
Confidence 0001111111 1244678999 6665555333222 33332110 0111112111
Q ss_pred CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce----E--EEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK----V--VQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----~--~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
. ....+ .+ .+|.++++.-..+.|...++.... . ...+-.-...+.++++.|||.++++..
T Consensus 268 ~-ap~G~--~~--~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 268 F-PPGNL--AF--FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp C-CEEEE--EE--ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred C-CCcce--EE--ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 1 11112 22 357777777677788888775432 1 122212235789999999998877754
No 287
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.34 E-value=0.00061 Score=55.61 Aligned_cols=199 Identities=14% Similarity=0.274 Sum_probs=119.2
Q ss_pred EEEECCC---CCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCC----CCE--E-E-EeeC--CCcEEEEec
Q 020798 78 DLVFSSD---SRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQ----SNM--I-V-SGAF--DETVRIWDV 144 (321)
Q Consensus 78 ~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l-~-~~~~--dg~i~~wd~ 144 (321)
.+..+|. ..+++.....+-+.+||+ .++.+..+.. +.+..+.+-|. ++. + + +.-. +.+|.+|++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 3444453 345666677788999999 6776666643 44566665552 221 2 2 3333 578999976
Q ss_pred --CCCEEEEEEeC-------CCCCeeEEEE--ccC-CC-EEEEEeCCCeEEEEeCC---C----CceeeeeccCCCCCeE
Q 020798 145 --KTGKCLKVLPA-------HSDPVTAVDF--NRD-GT-MIVTSSYDGLCRIWDAS---T----GHCMKTLIDDENPPVS 204 (321)
Q Consensus 145 --~~~~~~~~~~~-------~~~~v~~~~~--~~~-~~-~l~~~~~dg~i~~~d~~---~----~~~~~~~~~~~~~~~~ 204 (321)
.+++ +..+.. ....+..+++ +|. +. ++++...+|.+..|++. . .+.++++.. ...+.
T Consensus 107 Dp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--gsq~E 183 (355)
T 3amr_A 107 DGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM--NSQTE 183 (355)
T ss_dssp CTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC--SSCEE
T ss_pred CCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC--CCCcc
Confidence 3333 333311 1144556777 664 43 57778888999998872 2 234445433 34577
Q ss_pred EEEEccCCCEEEEEecCCeEEEEeCC-----CCcEEEEEec-cC-CceeEEEeEEEecCCe-EEEEeC-CCCeEEEEEcc
Q 020798 205 FVKFSPNGKFILVGTLDNTLRLWNYS-----TGKILKTYTG-HT-NSKYCISSTFSVTNGK-YIVSGS-EDSCVYLWELQ 275 (321)
Q Consensus 205 ~~~~~~~g~~l~~~~~d~~i~i~d~~-----~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~vwd~~ 275 (321)
.+..++....|+++-++..|..|+.. +++.+..+.. +- ...-.+. .+..++++ +|++.+ .+.++.+||.+
T Consensus 184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLa-i~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLT-IYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEE-EEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEE-EEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 88899988899999998778888854 3445554421 11 1223333 22233444 555444 67799999996
Q ss_pred -cceEEEEe
Q 020798 276 -SRKVVQKL 283 (321)
Q Consensus 276 -~~~~~~~~ 283 (321)
+.+.+..+
T Consensus 263 ~~~~~vg~f 271 (355)
T 3amr_A 263 GKNKYVADF 271 (355)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEEEEE
Confidence 55666555
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.33 E-value=0.00099 Score=56.29 Aligned_cols=212 Identities=10% Similarity=0.029 Sum_probs=124.4
Q ss_pred cccEEEEEECCCCCEE-EEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeCCCcEEEE
Q 020798 23 LRAISSVKFSHDGRLL-ASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLW 100 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l-~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iw 100 (321)
...+..++|++.+..| .+-...+.|..+++..... .......+.........+++.+. +++.++-...+.|.+.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~----~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~ 186 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG----VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 186 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC----------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC----CCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEE
Confidence 4567789999865554 4444567777776643110 00011111222345678899874 4555555667889999
Q ss_pred ecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE-eC
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS-SY 177 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~ 177 (321)
+++.......+.........++++|.+..|+.+.. .+.|...++............-.....+++++++..|+.+ ..
T Consensus 187 ~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~ 266 (400)
T 3p5b_L 187 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 266 (400)
T ss_dssp CTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC
Confidence 98765433333333345788999997776665543 3678888876443333333333456889999877766655 45
Q ss_pred CCeEEEEeCCCCceeeeeccC--CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 020798 178 DGLCRIWDASTGHCMKTLIDD--ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTG 240 (321)
Q Consensus 178 dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 240 (321)
.+.|..+|+.... ...+... .......+++. .+..+++-...+.|..+|..+++.+..+..
T Consensus 267 ~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 267 LHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp TTEEEEEETTSCC-CEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred CCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 6789999986543 2222221 12234455552 334444545567899999777776666543
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.30 E-value=1.1e-05 Score=73.24 Aligned_cols=216 Identities=7% Similarity=-0.039 Sum_probs=121.5
Q ss_pred cEEEEEECCCCCEEEEE-eCCCcEEEEecCC----cceeeeeecCcccEEEEEECCCCCE-EEEeeCCCcEEEEecCCCE
Q 020798 75 GVSDLVFSSDSRFLVSA-SDDKTIRLWDVPT----ATCLKTLIGHTNYVFCVNFNPQSNM-IVSGAFDETVRIWDVKTGK 148 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~-~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~ 148 (321)
.+..++|.+.+..|+.+ ...+.|..+++.. ......+.........+++.+.++. +++-...+.|.++++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 45678898866655544 4567899998875 2211111111123456788865544 4444566889999987554
Q ss_pred EEEEEeCCCCCeeEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE-ecCCeEE
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGTMIVTSSY--DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG-TLDNTLR 225 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~d~~i~ 225 (321)
....+.........+++.|.+..|+.+.. .+.|..+++.... ...+..........++++|++..|+.+ ...+.|.
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 33333322344578899987655554442 2677777665322 222222222334678999876555554 4567899
Q ss_pred EEeCCCCcEEEEEeccC--CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEe
Q 020798 226 LWNYSTGKILKTYTGHT--NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVAS 295 (321)
Q Consensus 226 i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 295 (321)
.+++........+.... .....++. ..+.++++....+.|..++..+++.+..+........+|++
T Consensus 566 ~~d~dG~~~~~~~~~~~~~~~P~glav----d~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 566 SIDVNGGNRKTILEDEKRLAHPFSLAV----FEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp EECSSSSCCEEECCCSSSCSSCCCCEE----ETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred EEccCCCceEEEEecCCcCCCceEeEE----ECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence 99986433222222111 11112221 23466667777889999998888877766543333455543
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.30 E-value=0.00085 Score=54.28 Aligned_cols=198 Identities=11% Similarity=0.101 Sum_probs=121.0
Q ss_pred EEEEEECCCCCEEE-EEeCCCcEEEEecCCcceeeeeecC-------cccEEEEEE---CCCCCEEEEee----------
Q 020798 76 VSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGH-------TNYVFCVNF---NPQSNMIVSGA---------- 134 (321)
Q Consensus 76 i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~---------- 134 (321)
..+++|++....|. +.-..++|..|+...+......... ...+..+.+ .|+++.+++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34678977544454 4447899999998765433222211 113578999 68876666543
Q ss_pred ---CCCcEEEEecC---CCEEEEEEeC-------------CCCCeeEEEEccCCCEEEEEeCC-CeEEEEeCCCCceeee
Q 020798 135 ---FDETVRIWDVK---TGKCLKVLPA-------------HSDPVTAVDFNRDGTMIVTSSYD-GLCRIWDASTGHCMKT 194 (321)
Q Consensus 135 ---~dg~i~~wd~~---~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d-g~i~~~d~~~~~~~~~ 194 (321)
.+..+..||+. +++.+..... .......++..++|+..++++.. +.|...+..... ...
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-Eee
Confidence 25779999998 6765543331 11236789999999999999888 888777766432 222
Q ss_pred ecc-----CCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcE--EEEE-ecc---CCceeEEEeEEEecCCeE-EEE
Q 020798 195 LID-----DENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKI--LKTY-TGH---TNSKYCISSTFSVTNGKY-IVS 262 (321)
Q Consensus 195 ~~~-----~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~--~~~~-~~~---~~~~~~~~~~~~~~~~~~-l~~ 262 (321)
+.. ......+.++++|+|+.|++....+.|..+|+..... +..- .+. -.....+ .....+|+. +++
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgi--lp~~~~G~vllV~ 251 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKI--VTVPVGNESVLVG 251 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEE--EEEEETTEEEEEE
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccc--cccccCCEEEEEE
Confidence 211 1122366899999999998887799999999885433 2211 011 0111112 122246776 455
Q ss_pred eCCCCeEEEEEccc
Q 020798 263 GSEDSCVYLWELQS 276 (321)
Q Consensus 263 ~~~dg~i~vwd~~~ 276 (321)
.+..+.+.+.+...
T Consensus 252 ~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 252 ARAPYAISFRSWDN 265 (334)
T ss_dssp EETTEEEEEECSST
T ss_pred cCCCCEEEEECCCC
Confidence 55566655655433
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.29 E-value=0.00095 Score=54.46 Aligned_cols=207 Identities=6% Similarity=0.031 Sum_probs=121.5
Q ss_pred ccEEEEEECCCC-CEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC-CCEEEEEeCCCcEEEEe
Q 020798 24 RAISSVKFSHDG-RLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD-SRFLVSASDDKTIRLWD 101 (321)
Q Consensus 24 ~~v~~~~~s~~g-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd 101 (321)
.....++|.+.+ .+..+-...+.|..++...... ....+...-.....+++.+. ++++++-...+.|.+++
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~-------~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~ 107 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-------VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSN 107 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC-------CCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc-------eEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEE
Confidence 345688999854 4455555667787776643210 00111111234567888874 44555556677899999
Q ss_pred cCCcceeeeeecCcccEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE-eCC
Q 020798 102 VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS-SYD 178 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 178 (321)
+..................++++|.+..++.+.. .+.|...++............-.....++++|++..|+.+ ...
T Consensus 108 ~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 108 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCC
Confidence 8754322222233345678999987666665553 5778888875432222222223445789999876655554 567
Q ss_pred CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 179 GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
+.|..+|+.... ...+..........+++.. +..+.+-...+.|..++..+++....+.
T Consensus 188 ~~I~~~d~dG~~-~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 188 NFIHKSNLDGTN-RQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TEEEEEETTSCS-CEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CEEEEEcCCCCc-eEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 889999986432 2333332233445666643 3344444456789999987776655554
No 292
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.25 E-value=0.00068 Score=54.74 Aligned_cols=227 Identities=14% Similarity=0.160 Sum_probs=112.6
Q ss_pred CCCEEEEEe-CC-----CcEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCC-----CcEEEEecCCCE--
Q 020798 84 DSRFLVSAS-DD-----KTIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIWDVKTGK-- 148 (321)
Q Consensus 84 ~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~-- 148 (321)
++..++.|+ .+ ..+.+||+.+.+.... +.........+. .++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 344555565 22 3688888877653221 111111111222 245666777654 468899987654
Q ss_pred -E--EEEEeCCCCCeeEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec
Q 020798 149 -C--LKVLPAHSDPVTAVDFNRDGTMIVTSSYD-----GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL 220 (321)
Q Consensus 149 -~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 220 (321)
- +..++........+. .++.+++.|+.+ ..+.+||+.+.+-........ ......+...+++.++.|+.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-AREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp CCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS-CCBSCEEEEETTEEEEECCB
T ss_pred eeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC-CcccceEEEECCEEEEECCC
Confidence 2 222221111112222 256677777643 358889987654322111111 11111112236777777765
Q ss_pred C-----CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccceEE--EEecCCCC
Q 020798 221 D-----NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRKVV--QKLEGHTD 288 (321)
Q Consensus 221 d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~--~~~~~h~~ 288 (321)
+ ..+.+||+.+.+....-.... +....... ..++..++.|+.+ ..+.+||+.+.+-. ..+.....
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 245 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMAT-KRSGAGVA--LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRC 245 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCc-ccccceEE--EECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCccc
Confidence 4 468999988765443311111 11111111 1367777877754 46889999776432 22221111
Q ss_pred CeEEEEecCCCceEEEEeecCC---ccEEEccccc
Q 020798 289 PVISVASHPTENIIASGALDND---RTVKIWTQEK 320 (321)
Q Consensus 289 ~v~~~~~~p~~~~l~s~~~d~~---~~i~iw~~~~ 320 (321)
.-..+.+ ++.+++.|+.++. ..|.+||.+.
T Consensus 246 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 246 YVGATVL--RGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp SCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred ceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCC
Confidence 1122222 6778888876543 3567777653
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.20 E-value=0.0037 Score=57.46 Aligned_cols=209 Identities=10% Similarity=0.016 Sum_probs=120.5
Q ss_pred cccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEE-EEEeCCCcEEEE
Q 020798 23 LRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFL-VSASDDKTIRLW 100 (321)
Q Consensus 23 ~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l-~~~~~d~~i~iw 100 (321)
...+..++|.+... ++++-...+.|..+++...... ......+.........|++.+.++.| ++-...+.|.+.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~----~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV----SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCC----cceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEE
Confidence 34567889988544 4455555677777766432100 01111122123456678898776544 455667889999
Q ss_pred ecCCcceeeeeecCcccEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE-eC
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS-SY 177 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~ 177 (321)
++........+.........|+++|.+..|+.+.. .+.|.+.++........+...-.....|++.+.+..|+.+ ..
T Consensus 499 ~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 499 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 98765433323333345789999998666665543 2678888886544433333333567889999776666555 45
Q ss_pred CCeEEEEeCCCCceeeeeccC--CCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCCCcEEEEE
Q 020798 178 DGLCRIWDASTGHCMKTLIDD--ENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYSTGKILKTY 238 (321)
Q Consensus 178 dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~~~~~~~~ 238 (321)
.+.|..+++..... ..+... .-.....+++ .+..|+.+. ..+.|...|..+++.+..+
T Consensus 579 ~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 579 LHSISSIDVNGGNR-KTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TTEEEEEETTSCSC-EEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CCcEEEEecCCCce-EEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 67899999865432 222221 1122334555 333555444 5678888887776554444
No 294
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.15 E-value=0.002 Score=52.51 Aligned_cols=218 Identities=10% Similarity=0.065 Sum_probs=122.8
Q ss_pred CCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEE-eeCCCcEEEEecCC----CEEEEEEeCCCCCeeEEEEccC
Q 020798 94 DKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVS-GAFDETVRIWDVKT----GKCLKVLPAHSDPVTAVDFNRD 168 (321)
Q Consensus 94 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~wd~~~----~~~~~~~~~~~~~v~~~~~~~~ 168 (321)
...|+..|+.+.+....+. .......++|++.++.|+. -...+.|+.+++.. ......+.........+++.+.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 3568888988765443332 3445678999987665554 45568899999875 2222223222234578899875
Q ss_pred CC-EEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC--CeEEEEeCCCCcEEEEEeccCCce
Q 020798 169 GT-MIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD--NTLRLWNYSTGKILKTYTGHTNSK 245 (321)
Q Consensus 169 ~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~ 245 (321)
+. ++++-...+.|.++++.... ...+..........++++|.+..|+.+... +.|..+++.. +....+.... ..
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~-~~ 164 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTEN-IQ 164 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSS-CS
T ss_pred CCeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECC-CC
Confidence 54 44555677899999987543 223332223456789999876666555543 6888888753 3333332111 11
Q ss_pred eEEEeEEEecCCeEEEEeCCCCeEEEEEcccce--EEEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccc
Q 020798 246 YCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK--VVQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQ 318 (321)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~ 318 (321)
......+...++.++++-...+.|..+|+.... .+.........-.++++. .+.++++-. ..+.|..++.
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~--~~~~V~~~~~ 236 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDI--INEAIFSANR 236 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEET--TTTEEEEEET
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEEC--CCCeEEEEeC
Confidence 112222333345666666777899999986432 222211122334677775 344455432 3456666653
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.14 E-value=0.002 Score=52.12 Aligned_cols=163 Identities=4% Similarity=0.008 Sum_probs=101.0
Q ss_pred ccEEEEEECCCCCEEEEee-CCCcEEEEecCCCEEEEE-EeC----CCC--CeeEEEE---ccCCCEEEEEe--------
Q 020798 116 NYVFCVNFNPQSNMIVSGA-FDETVRIWDVKTGKCLKV-LPA----HSD--PVTAVDF---NRDGTMIVTSS-------- 176 (321)
Q Consensus 116 ~~v~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~-~~~----~~~--~v~~~~~---~~~~~~l~~~~-------- 176 (321)
....+++|++....|..++ ..+.|..||...+..... ++. ... .+..+.| .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 3345678987666655555 789999999875543322 221 111 3578899 68877776543
Q ss_pred -----CCCeEEEEeCC---CCceeeeecc-----C-------CCCCeEEEEEccCCCEEEEEecC-CeEEEEeCCCCcEE
Q 020798 177 -----YDGLCRIWDAS---TGHCMKTLID-----D-------ENPPVSFVKFSPNGKFILVGTLD-NTLRLWNYSTGKIL 235 (321)
Q Consensus 177 -----~dg~i~~~d~~---~~~~~~~~~~-----~-------~~~~~~~~~~~~~g~~l~~~~~d-~~i~i~d~~~~~~~ 235 (321)
.+..+..+|+. +++.+..... . .......++..++|+..++++.. +.|..++.......
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~ 172 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVS 172 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEe
Confidence 25778999998 6655433210 0 11236789999999999998888 88888886543222
Q ss_pred EEEeccC--CceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce
Q 020798 236 KTYTGHT--NSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 236 ~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
.-+.... .....+.-....+++..|++....|.|..+|+....
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv 217 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY 217 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc
Confidence 2221111 111112223345778777777669999999988543
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.09 E-value=0.0046 Score=55.35 Aligned_cols=203 Identities=5% Similarity=-0.015 Sum_probs=115.8
Q ss_pred ccEEEEEECCCCCEEE-EEeCCCcEEEEecCCcceeeee-ecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEE
Q 020798 74 QGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTL-IGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCL 150 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~ 150 (321)
..+..++|++.+..|+ +-...+.|..+++........+ ..--.....+++++.++.| ++-...+.|.+.++......
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 3467899998666555 4445677888888655321222 2222457789999866555 44456788999998754333
Q ss_pred EEEeCCCCCeeEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEE
Q 020798 151 KVLPAHSDPVTAVDFNRDGTMIVTSSY--DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLW 227 (321)
Q Consensus 151 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~ 227 (321)
..+...-.....+++.|.+..|+.+.. .+.|...++... ....+..........+++++++..|..+. ..+.|..+
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~-~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC-ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 333233345678999997665555543 456666666532 22333333334567899999766666654 45789999
Q ss_pred eCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE
Q 020798 228 NYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ 281 (321)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (321)
|+..........+.......+.. ..+..+.+-...+.|...|..+++...
T Consensus 199 ~~dG~~~~~~~~~~~~~P~gi~~----~~~~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 199 NLDGTNRQAVVKGSLPHPFALTL----FEDILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp SSSCCEEC---------CCCEEE----SSSEEEEECTTTCSEEEEESSSCCCCE
T ss_pred cCCCCccEEEEeCCCCCceEEEE----eCCEEEEecCCCCEEEEEECCCCcccE
Confidence 88653322222111111122221 233556666677889888887765433
No 297
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.08 E-value=0.0027 Score=51.34 Aligned_cols=227 Identities=11% Similarity=0.103 Sum_probs=112.8
Q ss_pred CEEEEEeC--CCcEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCC----CcEEEEecCCCEEEEEEeCCC
Q 020798 86 RFLVSASD--DKTIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD----ETVRIWDVKTGKCLKVLPAHS 157 (321)
Q Consensus 86 ~~l~~~~~--d~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~~~~ 157 (321)
.+++.|+. ...+.+||..+.+.... +.........+.+ ++..++.|+.+ ..+.+||+.+.+-...-....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555654 35788999887653221 1111111112222 45566777654 568889988775332221111
Q ss_pred CCeeEEEEccCCCEEEEEeCC------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec---------CC
Q 020798 158 DPVTAVDFNRDGTMIVTSSYD------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL---------DN 222 (321)
Q Consensus 158 ~~v~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~---------d~ 222 (321)
......+..-++.+++.|+.+ ..+.+||+.+..-...-.... +.....+...+++.++.|+. -.
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT-QRCSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC-CcceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 111111112256677777754 458889987764322111111 11111112236666666653 34
Q ss_pred eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccceE--EEEecCCCCCeEEEEe
Q 020798 223 TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRKV--VQKLEGHTDPVISVAS 295 (321)
Q Consensus 223 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~--~~~~~~h~~~v~~~~~ 295 (321)
.+.+||+.+.+-...-.... ....-.... .++.+++.|+.+ ..+.+||..+.+- +..+.........+.+
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIE-ARKNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp CEEEEETTTTEEEEECCCSS-CCBSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE
T ss_pred eEEEeCCCCCeEEECCCccc-hhhcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE
Confidence 58899988775433221111 111111111 267777777654 3588899877542 2222211122223333
Q ss_pred cCCCceEEEEeecCC---ccEEEccccc
Q 020798 296 HPTENIIASGALDND---RTVKIWTQEK 320 (321)
Q Consensus 296 ~p~~~~l~s~~~d~~---~~i~iw~~~~ 320 (321)
++.+++.|+.++. ..+.+||.+.
T Consensus 247 --~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 247 --GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp --TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred --CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 6778888876533 3577777654
No 298
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.0043 Score=53.47 Aligned_cols=206 Identities=12% Similarity=0.098 Sum_probs=111.2
Q ss_pred cEEEEEECCC-CCEEEEe-cCCceEEEeeccccCCCCCCCCCccccc-ccccccEEEEEE-------CCCCCEEEEEeCC
Q 020798 25 AISSVKFSHD-GRLLASS-SADKTLLTYSLSSISNSDSTPPSPLQKF-TGHEQGVSDLVF-------SSDSRFLVSASDD 94 (321)
Q Consensus 25 ~v~~~~~s~~-g~~l~~~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~-------~~~~~~l~~~~~d 94 (321)
....|+|+|. ...|..+ ...+.|++.|+...... .+... .........++| ++++++|+.+...
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~------~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS------SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE------EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE------EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 3567899983 4444444 43456666665432110 00000 111235789999 9999966666554
Q ss_pred C-------cEEEEecCC-ccee-----eeeecCcccEEEEEECCCC-CEEEEeeCCCcEEEEecC-------CCEE----
Q 020798 95 K-------TIRLWDVPT-ATCL-----KTLIGHTNYVFCVNFNPQS-NMIVSGAFDETVRIWDVK-------TGKC---- 149 (321)
Q Consensus 95 ~-------~i~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~wd~~-------~~~~---- 149 (321)
+ .|.+++... +... ..+.. ......++++|++ .++++-..++.|+.+|+. ++..
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred CCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 3 255665333 1211 11211 1234567889954 455566677889999987 4443
Q ss_pred -------EEE-EeC-CCCCeeEEEEccCCCE-EEEEeCCCeEEEEeC--CCCcee--eeeccC---CC-----------C
Q 020798 150 -------LKV-LPA-HSDPVTAVDFNRDGTM-IVTSSYDGLCRIWDA--STGHCM--KTLIDD---EN-----------P 201 (321)
Q Consensus 150 -------~~~-~~~-~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~d~--~~~~~~--~~~~~~---~~-----------~ 201 (321)
... +.. .......++|+|+++. +++-.....|+.++. ..+... ..+... .. .
T Consensus 293 ~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~ 372 (496)
T 3kya_A 293 VKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMN 372 (496)
T ss_dssp GGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCS
T ss_pred ccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccC
Confidence 111 222 1234578999999995 445556778888654 332210 111110 00 1
Q ss_pred CeE-EEEEc-------cCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 202 PVS-FVKFS-------PNGKFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 202 ~~~-~~~~~-------~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
... .+... ++|.++++=..+..|+.++ .++. +.++.
T Consensus 373 ~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~Tia 416 (496)
T 3kya_A 373 NPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYA 416 (496)
T ss_dssp SEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEE
T ss_pred CCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEe
Confidence 123 44554 4566665555678899998 4564 44443
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.98 E-value=0.0045 Score=50.68 Aligned_cols=232 Identities=10% Similarity=0.050 Sum_probs=116.1
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...+.++.|.| ++.++. +..+.+..- ...... -..+.....+...+..+.+.++++.++++ .++.|.. ..
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i~~S-~DgG~t-----W~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~ 148 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIMLHT-TDGGQS-----WSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TK 148 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEEEEE-SSTTSS-----CEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ES
T ss_pred CccEEEEEecC-CeEEEE-ECCCeEEEE-CCCCCC-----ceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-Ec
Confidence 34678888876 444444 445544331 111111 01111111122346777777777666554 4554432 12
Q ss_pred CCcceeee-eecCcccEEEEEECCCCCEEEEeeCCCcEEEEec--CCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC
Q 020798 103 PTATCLKT-LIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDV--KTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179 (321)
Q Consensus 103 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 179 (321)
+.++.... ...+...+..+.+.|++..++.+...+..+-.|- .+-+.+. ......+..+.+.+++..+ .++.+|
T Consensus 149 DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G 225 (327)
T 2xbg_A 149 DSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGG 225 (327)
T ss_dssp STTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTT
T ss_pred CCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCc
Confidence 22322222 2344556888999998877766544333333442 2222221 2234567889998888655 555678
Q ss_pred eEEEEeCCCCceeeeeccC---CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc---CCceeEEEeEEE
Q 020798 180 LCRIWDASTGHCMKTLIDD---ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH---TNSKYCISSTFS 253 (321)
Q Consensus 180 ~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~ 253 (321)
.+++.+...++.-..+... ....+..+.+.+++..++++ .++.+ ++....++.-..+... ....+.+. +.
T Consensus 226 ~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~--~~ 301 (327)
T 2xbg_A 226 KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKIL--FF 301 (327)
T ss_dssp EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEE--EE
T ss_pred eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEE--EE
Confidence 7777643323322222111 12346778888887766654 46656 3444444433333211 12233332 22
Q ss_pred ecCCeEEEEeCCCCeEEEEE
Q 020798 254 VTNGKYIVSGSEDSCVYLWE 273 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd 273 (321)
.++. +++++.+|.|.-++
T Consensus 302 -~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 302 -SPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp -ETTE-EEEECSTTEEEEEC
T ss_pred -CCCc-eEEEcCCceEEEEc
Confidence 3455 44556788776554
No 300
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.98 E-value=0.0042 Score=50.11 Aligned_cols=225 Identities=14% Similarity=0.175 Sum_probs=109.7
Q ss_pred CEEEEEeCC----CcEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCC-----CcEEEEecCCCEEEEE--
Q 020798 86 RFLVSASDD----KTIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIWDVKTGKCLKV-- 152 (321)
Q Consensus 86 ~~l~~~~~d----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~-- 152 (321)
..++.|+.+ ..+..||+.+.+.... +.........+.+ ++..++.|+.+ ..+.+||..+.+-...
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 445555533 3577888876653221 1110111112222 45666777654 3588899887753322
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeCCC-----eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC------
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSYDG-----LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD------ 221 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d------ 221 (321)
++...... +++. .++.+++.|+.++ .+.+||+.+.+-...........-..+ ...+++.++.|+.+
T Consensus 95 ~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 95 MRDRRSTL-GAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGV-GVVGGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CSSCCBSC-EEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEECCEETTTTEE
T ss_pred CCccccce-EEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceE-EEECCEEEEEeCCCCCCCcc
Confidence 22111111 2222 2567777777553 477888876543221111111111112 22366666666542
Q ss_pred -CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccceEE--EEecCCCCCeEEE
Q 020798 222 -NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRKVV--QKLEGHTDPVISV 293 (321)
Q Consensus 222 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~--~~~~~h~~~v~~~ 293 (321)
..+.+||+.+.+-...-.... ........ ..++..++.|+.+ ..+.+||..+.+-. ..+...... .++
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~ 247 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMST-RRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN-AGV 247 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSS-CCBSCEEE--EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEE
T ss_pred ccEEEEEeCCCCcEEECCCCcc-ccccccEE--EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc-CeE
Confidence 458899988765433211111 11111111 1367788888754 36889998775432 222111111 122
Q ss_pred EecCCCceEEEEeecCC---ccEEEccccc
Q 020798 294 ASHPTENIIASGALDND---RTVKIWTQEK 320 (321)
Q Consensus 294 ~~~p~~~~l~s~~~d~~---~~i~iw~~~~ 320 (321)
+. .++.+++.|+.++. ..|.+||.+.
T Consensus 248 ~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 248 CA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp EE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 22 26778888876532 3478888754
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.96 E-value=0.00014 Score=66.08 Aligned_cols=210 Identities=10% Similarity=0.020 Sum_probs=114.5
Q ss_pred ccEEEEEECCCCCEEEEe-cCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCC-CEEEEEeCCCcEEEEe
Q 020798 24 RAISSVKFSHDGRLLASS-SADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDS-RFLVSASDDKTIRLWD 101 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~-~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd 101 (321)
..+..++|.+.+..|+.+ ...+.|..+++...... . .....+.........|++.+.+ +++++-...+.|.+++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~--~--~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d 481 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV--S--SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 481 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC---C--CCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEB
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCC--c--ceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEe
Confidence 345578898876665544 44567777776531100 0 0011111111234567888544 4445545677899999
Q ss_pred cCCcceeeeeecCcccEEEEEECCCCCEEEEeeC--CCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCE-EEEEeCC
Q 020798 102 VPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAF--DETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTM-IVTSSYD 178 (321)
Q Consensus 102 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d 178 (321)
+........+.........++++|.+..|+.+.. .+.|.++++........+...-.....|+|+|++.. +++-...
T Consensus 482 ~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~ 561 (699)
T 1n7d_A 482 TKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 561 (699)
T ss_dssp SSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTT
T ss_pred cCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCC
Confidence 8765432222222234567889987665555443 267887776533221111122234567999987554 4555567
Q ss_pred CeEEEEeCCCCceeeeeccC--CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 179 GLCRIWDASTGHCMKTLIDD--ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
+.|..+|+.... ...+... .......+++..+ .++++....+.|..+|..+++.+..+.
T Consensus 562 ~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 562 HSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp TEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred CeEEEEccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 889999986432 2222221 1112233455443 344444556789999988887776654
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.91 E-value=0.011 Score=52.87 Aligned_cols=202 Identities=7% Similarity=-0.061 Sum_probs=122.3
Q ss_pred ccEEEEEECCCCCEEE-EEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEE-EEeeCCCcEEEEecCCCEEEE
Q 020798 74 QGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~ 151 (321)
..+..++|++.+..|+ +-..++.|..+++........+..-......+++.+.++.| ++-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 3577899998665554 55667889989887654322222112345678888766555 444556789999886543222
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEe
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSY--DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWN 228 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d 228 (321)
.+...-.....+++.|....|+.+.. .+.|...++.... ...+.. .......+++++++..|..+. ..+.|..+|
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d 194 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSN 194 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEc
Confidence 23233345689999986555555543 5677777776433 223322 234567899999877776665 467899999
Q ss_pred CCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEE
Q 020798 229 YSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQK 282 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 282 (321)
+..... ..+.........++. ..+..+.+-...+.|...|..+++....
T Consensus 195 ~dG~~~-~v~~~~l~~P~glav----~~~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 195 MLGLNR-EVIADDLPHPFGLTQ----YQDYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp TTSCSC-EEEEECCSCEEEEEE----ETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CCCCce-EEeeccCCCceEEEE----ECCEEEEecCCCCEEEEEECCCCCceEE
Confidence 865433 223222222233322 2356666666788899888766654333
No 303
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.91 E-value=0.0054 Score=49.65 Aligned_cols=226 Identities=10% Similarity=0.090 Sum_probs=110.2
Q ss_pred CCCEEEEEeCC----CcEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeC----C-----CcEEEEecCCCE
Q 020798 84 DSRFLVSASDD----KTIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAF----D-----ETVRIWDVKTGK 148 (321)
Q Consensus 84 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~----d-----g~i~~wd~~~~~ 148 (321)
++..++.|+.+ ..+.+||..+.+.... +.........+.+ ++..++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 45556666532 3578888877653221 1100111111222 4556666665 2 457889988765
Q ss_pred EEEE--EeCCCCCeeEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeeeccCC-CCCeEEEEEccCCCEEEEEec
Q 020798 149 CLKV--LPAHSDPVTAVDFNRDGTMIVTSSYD-----GLCRIWDASTGHCMKTLIDDE-NPPVSFVKFSPNGKFILVGTL 220 (321)
Q Consensus 149 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~ 220 (321)
-... ++........+. -++.+++.|+.+ ..+.+||+.+.+-........ ...-..+.+ ++++++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 3222 111111112222 256667776643 357888887654222110011 111122222 6667777765
Q ss_pred C-----CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccceEEE--EecCCCC
Q 020798 221 D-----NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRKVVQ--KLEGHTD 288 (321)
Q Consensus 221 d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~--~~~~h~~ 288 (321)
+ ..+.+||+.+.+-...-.... +........ .++..++.|+.+ ..+.+||+.+.+-.. .+.....
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNT-IRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS 254 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCC-ccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc
Confidence 4 468999988765432211111 111111111 267777877654 458899987764321 1211111
Q ss_pred CeEEEEecCCCceEEEEeecCC---ccEEEccccc
Q 020798 289 PVISVASHPTENIIASGALDND---RTVKIWTQEK 320 (321)
Q Consensus 289 ~v~~~~~~p~~~~l~s~~~d~~---~~i~iw~~~~ 320 (321)
. .+++. -++.+++.|+.++. ..|.+||.+.
T Consensus 255 ~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 255 A-LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp S-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred c-eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 1 12222 25778888876532 3467777653
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.86 E-value=0.0068 Score=48.79 Aligned_cols=189 Identities=16% Similarity=0.174 Sum_probs=96.0
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCcc---eeee--eecCcccEEEEEECCCCCEEEEeeCC-----CcEEEEecCCCE
Q 020798 84 DSRFLVSASDD-----KTIRLWDVPTAT---CLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIWDVKTGK 148 (321)
Q Consensus 84 ~~~~l~~~~~d-----~~i~iwd~~~~~---~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~ 148 (321)
+++.++.|+.+ ..+.+||+.+.+ .... +.........+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56677777754 468899987765 3221 1111111112222 45666666643 358889988775
Q ss_pred EEEEEeCCCCCeeEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC--
Q 020798 149 CLKVLPAHSDPVTAVDFNRDGTMIVTSSYD-----GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD-- 221 (321)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d-- 221 (321)
-...-+.........+...++.+++.|+.+ ..+.+||+.+..-...-.... +.....+...+++.++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMAT-KRSGAGVALLNDHIYVVGGFDGT 218 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCBCSS
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCc-ccccceEEEECCEEEEEeCCCCC
Confidence 332221111111111122366677777654 458889987764322111111 111111222366777777654
Q ss_pred ---CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccce
Q 020798 222 ---NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRK 278 (321)
Q Consensus 222 ---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 278 (321)
..+.+||+.+.+....-..... ....... ..++..++.|+.+ ..+.+||..+.+
T Consensus 219 ~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSWTTVTSMTTP-RCYVGAT--VLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSC-CBSCEEE--EETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred cccceEEEEeCCCCcEEECCCCCCc-ccceeEE--EECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 4689999987764433211111 1111111 1367777777755 357788876653
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.84 E-value=0.015 Score=52.09 Aligned_cols=158 Identities=9% Similarity=-0.004 Sum_probs=88.3
Q ss_pred ccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeC--CCcEEEE
Q 020798 24 RAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASD--DKTIRLW 100 (321)
Q Consensus 24 ~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~--d~~i~iw 100 (321)
.....+++.+.+. +..+-...+.|.+.++..... . ......-.....|++.|.+.+|+.+.. .+.|...
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~------~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~ 155 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR------K--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERA 155 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------E--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE------E--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEE
Confidence 4577889988555 445556677888887654211 0 011122234678999887555554432 3567666
Q ss_pred ecCCcceeeeeecCcccEEEEEECCCCCEEEEe-eCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCC
Q 020798 101 DVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSG-AFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDG 179 (321)
Q Consensus 101 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 179 (321)
+++...........-.....++++++++.|+.+ ...+.|...|+..................+++..+ ..+.+-...+
T Consensus 156 ~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~ 234 (619)
T 3s94_A 156 GMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTH 234 (619)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTC
T ss_pred ECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCC
Confidence 765433222222233456789999977666555 45678888888654433222211222346676654 3444444567
Q ss_pred eEEEEeCCCCc
Q 020798 180 LCRIWDASTGH 190 (321)
Q Consensus 180 ~i~~~d~~~~~ 190 (321)
.|...|..+++
T Consensus 235 ~V~~~d~~tg~ 245 (619)
T 3s94_A 235 SILACNKYTGE 245 (619)
T ss_dssp SEEEEESSSCC
T ss_pred EEEEEECCCCc
Confidence 78888876654
No 306
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.76 E-value=0.033 Score=53.54 Aligned_cols=280 Identities=13% Similarity=0.111 Sum_probs=141.6
Q ss_pred cccEEEEEECCC------CCEEEEecC-CceEEEeeccccCCCCCCCCCcccccccccccEEEEEEC--CCCCEEEEEeC
Q 020798 23 LRAISSVKFSHD------GRLLASSSA-DKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFS--SDSRFLVSASD 93 (321)
Q Consensus 23 ~~~v~~~~~s~~------g~~l~~~~~-d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~--~~~~~l~~~~~ 93 (321)
...|+|+++.|. ++++++|.. |+.++++++...... ..+.+.. .....++.+. ....+|..|-.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~------~~~~L~~-~~~p~si~l~~~~~~~~L~igl~ 625 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL------HKEMLGG-EIIPRSILMTTFESSHYLLCALG 625 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE------EEEECCS-SCCEEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE------EEEECCC-CCCCcEEEEEEeCCCcEEEEEeC
Confidence 457999999863 368999986 999999988642110 1111211 1122333322 23457889999
Q ss_pred CCcEEEEecC--Ccceee---eeecCcccEEEEEECCCCC-EEEEeeCCCcEEEEecCCCEEEEEEeCCCCCe-eEEEEc
Q 020798 94 DKTIRLWDVP--TATCLK---TLIGHTNYVFCVNFNPQSN-MIVSGAFDETVRIWDVKTGKCLKVLPAHSDPV-TAVDFN 166 (321)
Q Consensus 94 d~~i~iwd~~--~~~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v-~~~~~~ 166 (321)
||.+..+.++ ++.... ...|. .++.-..+...+. -+++++. ....++--+ ++.... +..-.++ ....|+
T Consensus 626 dG~l~~~~~d~~tg~l~d~r~~~LG~-~pv~L~~~~~~~~~~V~a~s~-rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~ 701 (1158)
T 3ei3_A 626 DGALFYFGLNIETGLLSDRKKVTLGT-QPTVLRTFRSLSTTNVFACSD-RPTVIYSSN-HKLVFS-NVNLKEVNYMCPLN 701 (1158)
T ss_dssp TSEEEEEEECTTTCCEEEEEEEECCS-SCCEEEEEESSSCEEEEEESS-SCEEEEESS-SSEEEE-EBSSSCCCEEEEEC
T ss_pred CCeEEEEEEcCCCCccccceeEEcCC-CceEEEEEeeCCceeEEEECC-CCEEEEEcC-CceEEe-ccChHHhceEeccC
Confidence 9988666553 333221 12222 2332222322333 2333333 333333322 222211 1122223 233454
Q ss_pred cC--CCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC-----------------------
Q 020798 167 RD--GTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD----------------------- 221 (321)
Q Consensus 167 ~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d----------------------- 221 (321)
.. .+-++..+ ++.+++..+..........-.-...+..++++|..+.++++..+
T Consensus 702 se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1158)
T 3ei3_A 702 SDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALS 780 (1158)
T ss_dssp CSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSE
T ss_pred cccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhh
Confidence 32 12344444 34588876643221111111223456677777766655443311
Q ss_pred --------------------------CeEEEEeCCCCcEEEEEeccCCc-eeEEEeEEEe-cCCeEEEEeC---------
Q 020798 222 --------------------------NTLRLWNYSTGKILKTYTGHTNS-KYCISSTFSV-TNGKYIVSGS--------- 264 (321)
Q Consensus 222 --------------------------~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~l~~~~--------- 264 (321)
+.|+++|..+.+.+..+.-.... ..++...... ....+++.|+
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~ 860 (1158)
T 3ei3_A 781 SSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAE 860 (1158)
T ss_dssp EEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSS
T ss_pred hcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCC
Confidence 24777887777777666543322 2233222221 2246788775
Q ss_pred -CCCeEEEEEcccceE--EEEecCCCCCeEEEEecCCCceEEEEeecCCccEEEccccc
Q 020798 265 -EDSCVYLWELQSRKV--VQKLEGHTDPVISVASHPTENIIASGALDNDRTVKIWTQEK 320 (321)
Q Consensus 265 -~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~~i~iw~~~~ 320 (321)
..|.|++|++..+++ +++. ...++|++++-- .|++||+-+ ..|++|+.++
T Consensus 861 ~~~Gri~vf~v~~~kL~lv~~~-~v~g~v~al~~~-~g~Lla~ig----~~l~vy~l~~ 913 (1158)
T 3ei3_A 861 PKQGRIVVFQYSDGKLQTVAEK-EVKGAVYSMVEF-NGKLLASIN----STVRLYEWTT 913 (1158)
T ss_dssp CCCEEEEEEEEETTEEEEEEEE-EESSCEEEEEEE-TTEEEEEET----TEEEEEEECT
T ss_pred CCceEEEEEEEECCEEEEEEEE-EcCCcCEEEeee-CCEEEEEcC----CEEEEEECCC
Confidence 458899999975443 2222 235788888633 355555432 5799998864
No 307
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.73 E-value=0.014 Score=48.39 Aligned_cols=225 Identities=11% Similarity=0.066 Sum_probs=119.7
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcc-eeeeee---cCcccEEEEEECCC---CCEEEEeeC----C----CcE
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT-CLKTLI---GHTNYVFCVNFNPQ---SNMIVSGAF----D----ETV 139 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----g~i 139 (321)
....|+|.|+|++++ +..++.|.+++. .++ .+..+. .-......++++|+ +..|+.+.. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 467899999998555 456699999973 343 222111 11245788999997 555544432 2 567
Q ss_pred EEEecCCC-------EE-EEEEeCC-CCCeeEEEEccCCCEEEEEeC-------------CCeEEEEeCCCCc-------
Q 020798 140 RIWDVKTG-------KC-LKVLPAH-SDPVTAVDFNRDGTMIVTSSY-------------DGLCRIWDASTGH------- 190 (321)
Q Consensus 140 ~~wd~~~~-------~~-~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~~d~~~~~------- 190 (321)
..|+.... +. ...++.. ......++|.|+|.++++.+. .|.|.-++....-
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 77776543 11 1123311 123467999999987666432 1345555543210
Q ss_pred eeeeeccCCCCCeEEEEEcc-CCCEEEEEecCC---eEEEEeCCC--------C--------cEEEEE-eccCCceeEEE
Q 020798 191 CMKTLIDDENPPVSFVKFSP-NGKFILVGTLDN---TLRLWNYST--------G--------KILKTY-TGHTNSKYCIS 249 (321)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~d~---~i~i~d~~~--------~--------~~~~~~-~~~~~~~~~~~ 249 (321)
....+.... .....++|+| +|+++++-...+ .|.+..... + .++..+ ..+. .. ..
T Consensus 188 ~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~-ap--~G 263 (354)
T 3a9g_A 188 NSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETW-AP--SG 263 (354)
T ss_dssp TCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCC-CE--EE
T ss_pred CCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCc-CC--cc
Confidence 001111111 2245789999 676555432221 244432110 0 111122 1111 11 11
Q ss_pred eEEE------ecCCeEEEEeCCCCeEEEEEcccc-eEE--EEe-cCCCCCeEEEEecCCCceEEEE
Q 020798 250 STFS------VTNGKYIVSGSEDSCVYLWELQSR-KVV--QKL-EGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 250 ~~~~------~~~~~~l~~~~~dg~i~vwd~~~~-~~~--~~~-~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
..+. ..+|.++++.-..+.|...++... +.. ..+ .+....+.++++.|||.++++.
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 2221 146777777777788988888753 222 222 2334578999999999877775
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.67 E-value=0.014 Score=46.89 Aligned_cols=186 Identities=14% Similarity=0.211 Sum_probs=94.4
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCCC-----cEEEEecCCCEEEE
Q 020798 84 DSRFLVSASDD-----KTIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFDE-----TVRIWDVKTGKCLK 151 (321)
Q Consensus 84 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~~ 151 (321)
+++.++.|+.+ ..+.+||..+.+.... +.........+.+ ++..++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56677777654 3588899877653221 1111111112222 456666776543 47788887765332
Q ss_pred E--EeCCCCCeeEEEEccCCCEEEEEeCC-------CeEEEEeCCCCceeeeeccCC-CCCeEEEEEccCCCEEEEEecC
Q 020798 152 V--LPAHSDPVTAVDFNRDGTMIVTSSYD-------GLCRIWDASTGHCMKTLIDDE-NPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 152 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~d 221 (321)
. ++..... .+++. -++.+++.|+.+ ..+.+||+.+..-........ ......+ ..++++++.|+.+
T Consensus 139 ~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG--VLNNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBS
T ss_pred cCCCCCcccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEE--EECCEEEEECCCC
Confidence 2 1111111 12222 256666666542 357889987654322111111 1111222 2366777777654
Q ss_pred -----CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC-----eEEEEEcccce
Q 020798 222 -----NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS-----CVYLWELQSRK 278 (321)
Q Consensus 222 -----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~ 278 (321)
..+.+||+.+.+-...-.... ........ ..++..++.|+.++ .+.+||..+.+
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~-~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNM-CRRNAGVC--AVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSS-CCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCC-ccccCeEE--EECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 468999988765433221111 11111111 13677888887654 48888887654
No 309
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.55 E-value=0.023 Score=45.94 Aligned_cols=186 Identities=10% Similarity=0.107 Sum_probs=93.3
Q ss_pred CCCEEEEEeC----C-----CcEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCC-----CcEEEEecCCC
Q 020798 84 DSRFLVSASD----D-----KTIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD-----ETVRIWDVKTG 147 (321)
Q Consensus 84 ~~~~l~~~~~----d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 147 (321)
+++.++.|+. + ..+.+||+.+.+.... +.........+.+ ++..++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5666677665 2 4688899877653221 1111111122222 45566666543 35788898876
Q ss_pred EEEEE--EeCCCCCeeEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeeeccCC-CCCeEEEEEccCCCEEEEEe
Q 020798 148 KCLKV--LPAHSDPVTAVDFNRDGTMIVTSSYD-----GLCRIWDASTGHCMKTLIDDE-NPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 148 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~ 219 (321)
+-... ++........+.+ ++.+++.|+.+ ..+.+||+.+..-........ ......+.+ ++++++.|+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeC
Confidence 53322 1111111122222 56677777654 458888987654321110011 111122222 667777776
Q ss_pred cC-----CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccce
Q 020798 220 LD-----NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRK 278 (321)
Q Consensus 220 ~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 278 (321)
.+ ..+.+||+.+.+-...-.... ......... .++++++.|+.+ ..+.+||..+.+
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKH-RRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCC-CccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 54 469999988765433211111 111111111 367777877754 357788876653
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.51 E-value=0.025 Score=45.52 Aligned_cols=188 Identities=10% Similarity=0.082 Sum_probs=94.9
Q ss_pred CCCEEEEEeCC----CcEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCC------CcEEEEecCCCEEEE
Q 020798 84 DSRFLVSASDD----KTIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD------ETVRIWDVKTGKCLK 151 (321)
Q Consensus 84 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~wd~~~~~~~~ 151 (321)
+++.++.|+.+ ..+.+||+.+.+.... +.........+.+ ++..++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56677777754 5688899887653221 1111111112222 45666777654 458889988775332
Q ss_pred EEeCCCCCe-eEEEEccCCCEEEEEeC---------CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEecC
Q 020798 152 VLPAHSDPV-TAVDFNRDGTMIVTSSY---------DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLD 221 (321)
Q Consensus 152 ~~~~~~~~v-~~~~~~~~~~~l~~~~~---------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d 221 (321)
.-....... .+++. -++.+++.|+. -..+.+||+.+..-...-.... +.....+..-++++++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIE-ARKNHGLVFVKDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCEE
T ss_pred CCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccc-hhhcceEEEECCEEEEEeCCC
Confidence 211111111 12222 35666666653 3457889987764322111111 111111122266677776643
Q ss_pred -----CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccce
Q 020798 222 -----NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRK 278 (321)
Q Consensus 222 -----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 278 (321)
..+.+||+.+.+-...-... .......... .++..++.|+.+ ..+.+||..+.+
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKMVSPMP-WKGVTVKCAA--VGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEECCCCS-CCBSCCEEEE--ETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCceEEEeeCCCCcEEECCCCC-CCccceeEEE--ECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 46899998876543321111 1111111111 267778877744 468889987653
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.49 E-value=0.031 Score=46.21 Aligned_cols=225 Identities=13% Similarity=0.114 Sum_probs=116.0
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcc--eeeee----ecCcccEEEEEECCC---CCEEEEee-C-------CC
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTAT--CLKTL----IGHTNYVFCVNFNPQ---SNMIVSGA-F-------DE 137 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~-------dg 137 (321)
....|+|.|+|++|+.+...|.|++++..... .+..+ .........++++|+ +..|+.+. . ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 45789999999834445567999999853221 11111 111234678999996 45544432 2 23
Q ss_pred cEEEEecCCC--E--EEE-EE---eC---CCCCeeEEEEccCCCEEEEEeCC-------------CeEEEEeCCCCc---
Q 020798 138 TVRIWDVKTG--K--CLK-VL---PA---HSDPVTAVDFNRDGTMIVTSSYD-------------GLCRIWDASTGH--- 190 (321)
Q Consensus 138 ~i~~wd~~~~--~--~~~-~~---~~---~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~--- 190 (321)
.|..++...+ . ... .+ +. .......++|.|+|.++++.+.. |.|.-++....-
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666666432 1 111 11 11 11223579999999766654432 355555554210
Q ss_pred ---------eeeeeccCCCCCeEEEEEcc-CCCEEEEEec-CC--eEEEEeCCCCc------------------------
Q 020798 191 ---------CMKTLIDDENPPVSFVKFSP-NGKFILVGTL-DN--TLRLWNYSTGK------------------------ 233 (321)
Q Consensus 191 ---------~~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~-d~--~i~i~d~~~~~------------------------ 233 (321)
....+... ......++|+| +|+++++-.. ++ .|.+. ..+.
T Consensus 179 npf~~~~~~~~~i~a~G-~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i--~~G~nyGwp~~~~~~~~~~~~~~~~~~~ 255 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYG-IRNPQGMAMNPWSNALWLNEHGPRGGDEINIP--QKGKNYGWPLATWGINYSGFKIPEAKGE 255 (353)
T ss_dssp CTTTTSTTSCTTEEEEC-CSEEEEEEEETTTTEEEEEEECSBSCEEEECC--CTTCBCCTTTBCSSBCTTSSCCTTCCBS
T ss_pred CCCcCCCCCCccEEEEc-CcCccceEEECCCCCEEEEecCCCCCcEEeEe--ccCCcCCCCCccCCCCCCCCccCcccCC
Confidence 01111111 12356789999 5655443221 11 23222 1110
Q ss_pred -------EEEEEeccCCceeEEEeEEEe------cCCeEEEEeCCCCeEEEEEcccceEEEE---ecCCCCCeEEEEecC
Q 020798 234 -------ILKTYTGHTNSKYCISSTFSV------TNGKYIVSGSEDSCVYLWELQSRKVVQK---LEGHTDPVISVASHP 297 (321)
Q Consensus 234 -------~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~p 297 (321)
++..+..+. . .....+.. .++.++++.-..+.|...++..++.... +......+.++++.|
T Consensus 256 ~~~~~~~P~~~~~~~~-a--p~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 256 IVAGTEQPVFYWKDSP-A--VSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp SCTTSCCCSEEESSCC-C--EEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCccCCeEEeCCCc-C--cceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 111111111 1 11122221 2477787777788888888876544322 222235789999999
Q ss_pred CCceEEEE
Q 020798 298 TENIIASG 305 (321)
Q Consensus 298 ~~~~l~s~ 305 (321)
||.++++.
T Consensus 333 dG~lyv~t 340 (353)
T 2g8s_A 333 DGYLYVLT 340 (353)
T ss_dssp TSCEEEEE
T ss_pred CCcEEEEE
Confidence 99877753
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.47 E-value=0.018 Score=43.64 Aligned_cols=140 Identities=14% Similarity=0.067 Sum_probs=78.4
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcce------eeee--ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC------LKTL--IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK 145 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~ 145 (321)
..+.+++|+|+|.+.++ .+|.+.-.+..+... ...+ .+... ...+.|.|+|.+.++ .||.|+-++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 35779999999986555 677776666544221 1111 01222 467889999988777 56998888753
Q ss_pred CCEE-------EEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCce-----eeeecc-CCCCCeEEEEEccCC
Q 020798 146 TGKC-------LKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHC-----MKTLID-DENPPVSFVKFSPNG 212 (321)
Q Consensus 146 ~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-----~~~~~~-~~~~~~~~~~~~~~g 212 (321)
+... ...-..--..+..+.+.|+|.+.++. ++.++-....+... ...... ..-.....+.|.++|
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 2110 01111112457899999999877666 77654333221110 011111 111123446688888
Q ss_pred CEEEEEecCC
Q 020798 213 KFILVGTLDN 222 (321)
Q Consensus 213 ~~l~~~~~d~ 222 (321)
...++. ++
T Consensus 194 ~l~~v~--~g 201 (236)
T 1tl2_A 194 TLFGVQ--GG 201 (236)
T ss_dssp CEEEEE--TT
T ss_pred cEEEEe--CC
Confidence 766655 55
No 313
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.43 E-value=0.024 Score=46.78 Aligned_cols=220 Identities=14% Similarity=0.101 Sum_probs=102.6
Q ss_pred CCCEEEEEeCC-CcEEEEecCC--cce--eeeee-cCcccEEEEEECCCCCEEEEeeC-C---------CcEEEEecCCC
Q 020798 84 DSRFLVSASDD-KTIRLWDVPT--ATC--LKTLI-GHTNYVFCVNFNPQSNMIVSGAF-D---------ETVRIWDVKTG 147 (321)
Q Consensus 84 ~~~~l~~~~~d-~~i~iwd~~~--~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~~wd~~~~ 147 (321)
+++.++.|+.+ ..+.+||+.. .+. +..+. ........+.+ ++..++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666666543 4688888864 322 11111 01111112222 4556666665 2 46888998876
Q ss_pred EEEEEEeCC-CCCeeEEEEccCCCEEEEEeCC---------------------------------------CeEEEEeCC
Q 020798 148 KCLKVLPAH-SDPVTAVDFNRDGTMIVTSSYD---------------------------------------GLCRIWDAS 187 (321)
Q Consensus 148 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~~~d~~ 187 (321)
+-...-... .......+...++.+++.|+.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 532221111 1111111222567777888754 578899987
Q ss_pred CCceeeeeccCCCCCe-EEEEEccCCCEEEEEec------CCeEEEEeC--CCCcEEEEEeccCCc--eeEEEeEEEecC
Q 020798 188 TGHCMKTLIDDENPPV-SFVKFSPNGKFILVGTL------DNTLRLWNY--STGKILKTYTGHTNS--KYCISSTFSVTN 256 (321)
Q Consensus 188 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~l~~~~~------d~~i~i~d~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 256 (321)
+.+-...-........ ..+.. .++++++.|+. ...+.+||+ .+.+-.. +.....+ ..... ....+
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~-~~~~~~~~~~~~~~--~~~~~ 252 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK-LAPVSSPDGVAGGF--AGISN 252 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEE-CCCSSTTTCCBSCE--EEEET
T ss_pred CCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEe-cCCCCCCcccccce--EEEEC
Confidence 7543221111111111 12222 25666666653 245777876 4333222 1111111 11111 11236
Q ss_pred CeEEEEeCCC----------------------CeEEEEEcccce--EEEEecCCCCCeEEEEecCCCceEEEEeecCCc
Q 020798 257 GKYIVSGSED----------------------SCVYLWELQSRK--VVQKLEGHTDPVISVASHPTENIIASGALDNDR 311 (321)
Q Consensus 257 ~~~l~~~~~d----------------------g~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~~~d~~~ 311 (321)
+.+++.|+.+ ..+.+||+.+.+ .+..+......-.++ ..++++++.|+.+.++
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~ 329 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGG 329 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGG
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCC
Confidence 7777777632 247788987653 333333222221222 2467888888876544
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.42 E-value=0.034 Score=44.99 Aligned_cols=211 Identities=12% Similarity=0.126 Sum_probs=102.2
Q ss_pred EEEEeCCCcEEEEecCCcceeee-eecCcccEEEEEECCCCCEEEEeeC----C-------CcEEEEecCCCEEEEE--E
Q 020798 88 LVSASDDKTIRLWDVPTATCLKT-LIGHTNYVFCVNFNPQSNMIVSGAF----D-------ETVRIWDVKTGKCLKV--L 153 (321)
Q Consensus 88 l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~----d-------g~i~~wd~~~~~~~~~--~ 153 (321)
++.|+ ..+.+||..+.+.... +..............++..++.|+. + ..+..||..+.+-... +
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 44455 5688999888764321 1111112222233456677777773 1 1277888887653221 1
Q ss_pred eCCCCCeeEEEEccCCCEEEEEeCC--------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-C---
Q 020798 154 PAHSDPVTAVDFNRDGTMIVTSSYD--------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-D--- 221 (321)
Q Consensus 154 ~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d--- 221 (321)
+..... .+++. -++.+++.|+.+ ..+.+||+.+.+-....... .+.....+...+++.++.|+. +
T Consensus 86 p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 86 PSPRCL-FGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-YVVYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp SSCEES-CEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred Ccchhc-eeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-CcccceeEEEECCEEEEEeCCCCCCc
Confidence 111111 11222 255666666632 35888898765422111001 111111122246667777765 2
Q ss_pred --CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC-----eEEEEEcccceE--EEEecCCCCCeEE
Q 020798 222 --NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS-----CVYLWELQSRKV--VQKLEGHTDPVIS 292 (321)
Q Consensus 222 --~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~--~~~~~~h~~~v~~ 292 (321)
..+.+||+.+.+-...-.... +...-... ..++..++.|+.++ .+.+||..+.+- +..+......-..
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQT-ARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSL 239 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSS-CCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred ccceEEEEeCCCCeEEECCCCCC-chhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeE
Confidence 468999988765433211111 11111111 12677777776544 578889876542 2222211111122
Q ss_pred EEecCCCceEEEEeec
Q 020798 293 VASHPTENIIASGALD 308 (321)
Q Consensus 293 ~~~~p~~~~l~s~~~d 308 (321)
+.+ ++.+++.|+.+
T Consensus 240 ~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 240 VSL--VGTLYAIGGFA 253 (315)
T ss_dssp EEE--TTEEEEEEEEE
T ss_pred EEE--CCEEEEECCcc
Confidence 222 56778888764
No 315
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.36 E-value=0.042 Score=44.56 Aligned_cols=224 Identities=15% Similarity=0.182 Sum_probs=107.0
Q ss_pred EEEEEeCCCcEEEEecCCcceeee-eecCcccEEEEEECCCCCEEEEeeC----CC-------cEEEEecCCCEEEEE--
Q 020798 87 FLVSASDDKTIRLWDVPTATCLKT-LIGHTNYVFCVNFNPQSNMIVSGAF----DE-------TVRIWDVKTGKCLKV-- 152 (321)
Q Consensus 87 ~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~~wd~~~~~~~~~-- 152 (321)
.++.|+. .+..||..+.+.... ...............++..++.|+. ++ .+..||..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 378899887764331 1111111122233456677777773 11 177788877653321
Q ss_pred EeCCCCCeeEEEEccCCCEEEEEeCC-------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-----
Q 020798 153 LPAHSDPVTAVDFNRDGTMIVTSSYD-------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL----- 220 (321)
Q Consensus 153 ~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~----- 220 (321)
++..... .+++. -++.+++.|+.+ ..+.+||+.+.+-....... .+.....+...+++.++.|+.
T Consensus 96 ~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCL-FGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKVYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp BSSCBCS-CEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCEESCEEEEETTEEEEECCEESSSC
T ss_pred CCccccc-cceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-CcccccEEEEECCEEEEEcCCCCCCC
Confidence 2211111 12222 256677777753 24778888765432211001 111111122246777777664
Q ss_pred -CCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC-----CeEEEEEcccceE--EEEecCCCCCeEE
Q 020798 221 -DNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED-----SCVYLWELQSRKV--VQKLEGHTDPVIS 292 (321)
Q Consensus 221 -d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~--~~~~~~h~~~v~~ 292 (321)
-..+.+||+.+.+-...-.... +........ .++..++.|+.+ ..+.+||..+.+- +..+......- +
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~ 248 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKT-PRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI-S 248 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSS-CCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC-E
T ss_pred ccceEEEEcCCCCEEEECCCCCC-CcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce-E
Confidence 2358999988765433221111 111111111 357777777543 3467888876542 22222111111 2
Q ss_pred EEecCCCceEEEEeecC------------CccEEEccccc
Q 020798 293 VASHPTENIIASGALDN------------DRTVKIWTQEK 320 (321)
Q Consensus 293 ~~~~p~~~~l~s~~~d~------------~~~i~iw~~~~ 320 (321)
++. .++.+++.|+.+. ...+.+||.+.
T Consensus 249 ~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 249 LVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp EEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred EEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 222 2567778777542 13477777653
No 316
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.33 E-value=0.082 Score=47.39 Aligned_cols=200 Identities=10% Similarity=0.006 Sum_probs=118.2
Q ss_pred ccEEEEEECCCCCEEE-EEeCCCcEEEEecCCcceeeeeec------CcccEEEEEECCCCCEE-EEeeCCCcEEEEecC
Q 020798 74 QGVSDLVFSSDSRFLV-SASDDKTIRLWDVPTATCLKTLIG------HTNYVFCVNFNPQSNMI-VSGAFDETVRIWDVK 145 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l-~~~~~dg~i~~wd~~ 145 (321)
..+..++|.+.+..|+ +-...+.|+.+++........+.. ....+..+++.+.++.| .+-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 4477899988655555 444567788888764332222221 12357789999876655 455667889999886
Q ss_pred CCEEEEEEeCCCCCeeEEEEccC-CCEEEEEeCCC--eEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-C
Q 020798 146 TGKCLKVLPAHSDPVTAVDFNRD-GTMIVTSSYDG--LCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-D 221 (321)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d 221 (321)
.......+........++++.|. |.++.+-.... .|...++.. .....+....-.....+++++.++.|..+.. .
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG-~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~ 498 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDG-TEREVLFFSGLSKPIALALDSRLGKLFWADSDL 498 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCC-CCcEEEEeccCCCccEEEEeCCCCEEEEEeCCC
Confidence 44322333334456789999994 54444433332 465555543 3233333333344688999998777776654 5
Q ss_pred CeEEEEeCCCCcEEEEEe-ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceE
Q 020798 222 NTLRLWNYSTGKILKTYT-GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV 279 (321)
Q Consensus 222 ~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (321)
+.|..+++.... .+.+. ........++. ..+..+.+-...+.|...|..+++.
T Consensus 499 ~~I~~~~~dG~~-r~~~~~~~~~~P~glav----~~~~ly~tD~~~~~i~~~~k~~G~~ 552 (628)
T 4a0p_A 499 RRIESSDLSGAN-RIVLEDSNILQPVGLTV----FENWLYWIDKQQQMIEKIDMTGREG 552 (628)
T ss_dssp TEEEEEETTSCS-CEEEECSSCSCEEEEEE----ETTEEEEEETTTTEEEEEETTSSSC
T ss_pred CEEEEEeCCCCc-eEEEEcCCCCCcEEEEE----ECCEEEEEECCCCeEEEEECcCCCC
Confidence 789999985433 33332 22222233322 2466666767777888888766543
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.31 E-value=0.053 Score=44.79 Aligned_cols=148 Identities=11% Similarity=0.117 Sum_probs=75.2
Q ss_pred cccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC---CCEEEEE-eC----
Q 020798 23 LRAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD---SRFLVSA-SD---- 93 (321)
Q Consensus 23 ~~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~---~~~l~~~-~~---- 93 (321)
......++|.|+|+ +++ +...+.|.+++.......... ..+ ........+...|+++|+ +..|+.+ +.
T Consensus 17 l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~-~~~-~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLS-GVP-DVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp ESSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCB-SCC-CCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEec-CCc-ccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 34567899999999 554 455788888764321110000 000 011122456789999995 4444433 22
Q ss_pred ---CCcEEEEecCCc--c--eeeee-ec------CcccEEEEEECCCCCEEEEeeC-------------CCcEEEEecCC
Q 020798 94 ---DKTIRLWDVPTA--T--CLKTL-IG------HTNYVFCVNFNPQSNMIVSGAF-------------DETVRIWDVKT 146 (321)
Q Consensus 94 ---d~~i~iwd~~~~--~--~~~~~-~~------~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~wd~~~ 146 (321)
...|..|++... + ....+ .. .......++|.|+|.++++.+. .|.|..++...
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 235666665432 1 11111 11 0111346899999966555433 24566666542
Q ss_pred CE------------EEEEE-eCCCCCeeEEEEcc-CCCEEEE
Q 020798 147 GK------------CLKVL-PAHSDPVTAVDFNR-DGTMIVT 174 (321)
Q Consensus 147 ~~------------~~~~~-~~~~~~v~~~~~~~-~~~~l~~ 174 (321)
.- ....+ ..+ .....++|.| +++++++
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 10 01111 122 2357899999 5655444
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.23 E-value=0.065 Score=44.17 Aligned_cols=154 Identities=13% Similarity=0.207 Sum_probs=88.8
Q ss_pred ccEEEEEECCCCCEEEEEe------------CCCcEEEEecCCc--cee-eeeec-----CcccEEEEEECC--CCC-EE
Q 020798 74 QGVSDLVFSSDSRFLVSAS------------DDKTIRLWDVPTA--TCL-KTLIG-----HTNYVFCVNFNP--QSN-MI 130 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~------------~d~~i~iwd~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l 130 (321)
.+..++...|+|..+++++ .+|.|.++|..+. +.. ..+.+ ..-....+.+.+ ++. +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 3556788888876555442 6899999998742 211 12222 112455666654 343 34
Q ss_pred EEe-eC--CCcEEEEecCC--CEE--EEEEeCC-CCCeeEEEEccCCCEEEEEe-----------------CCCeEEEEe
Q 020798 131 VSG-AF--DETVRIWDVKT--GKC--LKVLPAH-SDPVTAVDFNRDGTMIVTSS-----------------YDGLCRIWD 185 (321)
Q Consensus 131 ~~~-~~--dg~i~~wd~~~--~~~--~~~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~~~d 185 (321)
+.+ .. +..|.+|++.. +.. +..+... -....++.+.++|+++++.. ..|.+.-+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 444 22 45677777654 222 2223221 23467899999998777654 124455555
Q ss_pred CCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe-cCCeEEEEeCCC
Q 020798 186 ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT-LDNTLRLWNYST 231 (321)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~~i~i~d~~~ 231 (321)
.. + ...+.. .-...+.++|+||++.+.++. ..+.|..|++..
T Consensus 210 ~~--~-~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 210 PN--D-VRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp TT--C-CEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CC--e-EEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 42 2 222221 123467899999998887765 568899999863
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.17 E-value=0.068 Score=43.22 Aligned_cols=191 Identities=10% Similarity=0.066 Sum_probs=92.0
Q ss_pred CCCCCEEEEEeC-----C------CcEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCC--------CcEE
Q 020798 82 SSDSRFLVSASD-----D------KTIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD--------ETVR 140 (321)
Q Consensus 82 ~~~~~~l~~~~~-----d------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~ 140 (321)
..+++.++.|+. . ..+.+||..+.+.... +.........+.+ ++..++.|+.+ ..+.
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEE
Confidence 346777777773 1 1277888877653221 1100011111222 45566666632 4588
Q ss_pred EEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-C-----CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCE
Q 020798 141 IWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-D-----GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKF 214 (321)
Q Consensus 141 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 214 (321)
+||..+.+-...-+.........+...++.+++.|+. + ..+.+||+.+..-....... .+.....+..-+++.
T Consensus 121 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i 199 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQ-TARSLFGATVHDGRI 199 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEE
T ss_pred EECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCC-CchhceEEEEECCEE
Confidence 8998876532211111111111122245667777765 2 36888998765422211001 111111122236677
Q ss_pred EEEEecCC-----eEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCCC--------------eEEEEEcc
Q 020798 215 ILVGTLDN-----TLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDS--------------CVYLWELQ 275 (321)
Q Consensus 215 l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--------------~i~vwd~~ 275 (321)
++.|+.++ .+.+||+.+.+-...-.... +....... ..++..++.|+.++ .+.+||..
T Consensus 200 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 276 (315)
T 4asc_A 200 IVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ-ERSSLSLV--SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEE 276 (315)
T ss_dssp EEEEEECSSSEEEEEEEEETTTTEEEEECCCSS-CCBSCEEE--EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT
T ss_pred EEEeccCCCCccceEEEEECCCCeEEECCCCCC-cccceeEE--EECCEEEEECCccccCcCCccccccccCcEEEecCC
Confidence 77777654 58899988765433221111 11111111 13567777776532 36677776
Q ss_pred cce
Q 020798 276 SRK 278 (321)
Q Consensus 276 ~~~ 278 (321)
+.+
T Consensus 277 ~~~ 279 (315)
T 4asc_A 277 EKK 279 (315)
T ss_dssp TTE
T ss_pred CCh
Confidence 653
No 320
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.15 E-value=0.08 Score=43.64 Aligned_cols=197 Identities=12% Similarity=0.140 Sum_probs=109.1
Q ss_pred cEEEEEECCCCCEEEEec------------CCceEEEeeccccCCCCCCCCCccccccc-----ccccEEEEEECC--CC
Q 020798 25 AISSVKFSHDGRLLASSS------------ADKTLLTYSLSSISNSDSTPPSPLQKFTG-----HEQGVSDLVFSS--DS 85 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~------------~d~~v~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~i~~~~~~~--~~ 85 (321)
+.-.++..|+|..+++++ .+|.|.++|..+... ....+ .+.+ ..-....+.+.+ ++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~----~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg 125 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP----AVSEL-EIIGNTLDISSFNPHGISTFIDDDN 125 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSC----CEEEC-EEECSSCCGGGCCEEEEEEEECTTC
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCC----ceEEE-EccCCCCCcCceeeeeeEEEECCCC
Confidence 444566789887766662 688899998753211 01111 1111 122445566544 44
Q ss_pred C-EEEEE-eC--CCcEEEEecCCcc----eeeeeecC-cccEEEEEECCCCCEEEEee-----------------CCCcE
Q 020798 86 R-FLVSA-SD--DKTIRLWDVPTAT----CLKTLIGH-TNYVFCVNFNPQSNMIVSGA-----------------FDETV 139 (321)
Q Consensus 86 ~-~l~~~-~~--d~~i~iwd~~~~~----~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~dg~i 139 (321)
. +|+.+ .. +.++.+|++.... .+..+.+. -...+.+.+.++|+++++.. ..|.+
T Consensus 126 ~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 126 TVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp CEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred cEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEE
Confidence 3 34433 22 4678888765432 12223221 23467888999998777654 12455
Q ss_pred EEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEE-eCCCeEEEEeCCC-Ccee-eeeccCCCCCeEEEEEcc-CCCEE
Q 020798 140 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTS-SYDGLCRIWDAST-GHCM-KTLIDDENPPVSFVKFSP-NGKFI 215 (321)
Q Consensus 140 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~-~g~~l 215 (321)
+.+|. ++.. .+...-...+.++|+|+++.++.+ +..+.|..|++.. +... .+.. ........+++++ +|++.
T Consensus 206 yr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 206 TYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp EEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEE
T ss_pred EEEEC--CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEE
Confidence 55554 3222 222222345789999999876665 4678999999853 3221 1122 2234567889999 59887
Q ss_pred EEEecC-CeEEEEeCC
Q 020798 216 LVGTLD-NTLRLWNYS 230 (321)
Q Consensus 216 ~~~~~d-~~i~i~d~~ 230 (321)
+++..+ +.|..|+..
T Consensus 282 va~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 282 VGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEESCHHHHHSCCTT
T ss_pred EEecCCceEEEEECCC
Confidence 766544 344445543
No 321
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.11 E-value=0.088 Score=43.45 Aligned_cols=106 Identities=11% Similarity=0.144 Sum_probs=58.8
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCC---CCEEEEE-eCC----
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSD---SRFLVSA-SDD---- 94 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~---~~~l~~~-~~d---- 94 (321)
......++|.|+|+++++ ..++.|.+++ .... .....+..+.........|+++|+ +..|+.+ ...
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~----~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR-EGRL----STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE-TTEE----EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE-CCCc----cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 345678999999996555 4568888876 2110 000000011122356789999998 4445443 322
Q ss_pred -CcEEEEecCCcc-----ee-eeee---cCcccEEEEEECCCCCEEEEee
Q 020798 95 -KTIRLWDVPTAT-----CL-KTLI---GHTNYVFCVNFNPQSNMIVSGA 134 (321)
Q Consensus 95 -~~i~iwd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~ 134 (321)
+.|..++..... .+ ..+. +.......++|.|+|..+++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 567778776432 11 1122 1111235789999997766643
No 322
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.08 E-value=0.034 Score=46.62 Aligned_cols=108 Identities=21% Similarity=0.289 Sum_probs=73.7
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcce------------eeeeec------CcccEEEEEECCC---CCEEEEe
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC------------LKTLIG------HTNYVFCVNFNPQ---SNMIVSG 133 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------------~~~~~~------~~~~v~~~~~~~~---~~~l~~~ 133 (321)
.|..+..+|+|++||..+. ..|.|-.++.+.. .+.+.- ....|..+.|+|- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 5778999999999987754 5788888763210 111211 2466999999995 4678888
Q ss_pred eCCCcEEEEecCCC--EEEEEEe---------CCCCCeeEEEEccCCCEEEEEe--CCCeEEEE
Q 020798 134 AFDETVRIWDVKTG--KCLKVLP---------AHSDPVTAVDFNRDGTMIVTSS--YDGLCRIW 184 (321)
Q Consensus 134 ~~dg~i~~wd~~~~--~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~ 184 (321)
..|+.|++||+... ++. .+. .....|.+++|.+++-.|...+ ..|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999999752 111 221 2235688999998776666644 77877643
No 323
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.07 E-value=0.17 Score=46.06 Aligned_cols=222 Identities=11% Similarity=0.126 Sum_probs=109.8
Q ss_pred CCCCEEEEEeCC----CcEEEEecCCcceeeee-e------cC-cccEEEEEECCCCCEEEEeeCC------CcEEEEec
Q 020798 83 SDSRFLVSASDD----KTIRLWDVPTATCLKTL-I------GH-TNYVFCVNFNPQSNMIVSGAFD------ETVRIWDV 144 (321)
Q Consensus 83 ~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~-~------~~-~~~v~~~~~~~~~~~l~~~~~d------g~i~~wd~ 144 (321)
.++..++.|+.+ ..+.+||..+++....- . .. ......+.+..++..++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 46888998776533221 1 01 1112223332256677777654 34788888
Q ss_pred CCCEEEEE--EeCCCCCeeEEEEccCCCEEEEEeCCC--eEEEEeCCCCceeeeec----cCCCCCeEEEEEccC-CCEE
Q 020798 145 KTGKCLKV--LPAHSDPVTAVDFNRDGTMIVTSSYDG--LCRIWDASTGHCMKTLI----DDENPPVSFVKFSPN-GKFI 215 (321)
Q Consensus 145 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~-g~~l 215 (321)
.+.+-... ++.... -.+++...++.+++.|+.++ .+.+||+.+..-..... .........+.+..+ ++.+
T Consensus 476 ~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 87643221 111111 12333324777888887654 68899988754322110 001111223445544 6677
Q ss_pred EEEec--C-----CeEEEEeCCCCc------EEEEEeccCCceeEEEeEEEecCCeEEEEeCC--------CCeEEEEEc
Q 020798 216 LVGTL--D-----NTLRLWNYSTGK------ILKTYTGHTNSKYCISSTFSVTNGKYIVSGSE--------DSCVYLWEL 274 (321)
Q Consensus 216 ~~~~~--d-----~~i~i~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------dg~i~vwd~ 274 (321)
+.|+. + +.+.+||+.+.+ ................... ..++..++.|+. ...+.+||.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY-ITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE-EETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE-eCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 77765 2 468999988776 2221111001111111111 223777777774 345899999
Q ss_pred ccceEEEEecCCCC------Ce---EEEEecCCCceEEEEee
Q 020798 275 QSRKVVQKLEGHTD------PV---ISVASHPTENIIASGAL 307 (321)
Q Consensus 275 ~~~~~~~~~~~h~~------~v---~~~~~~p~~~~l~s~~~ 307 (321)
.+.+-. .+..... +. .+.+..+++++++.||.
T Consensus 634 ~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 634 LSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp TTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred CCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 876532 1211100 00 23444456677777764
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.05 E-value=0.099 Score=43.05 Aligned_cols=141 Identities=14% Similarity=0.031 Sum_probs=62.3
Q ss_pred CcEEEEecCCCEEEEEEeCCC-CCe-eEEEEccCCCEEEEEeC------CCeEEEEeC--CCCceeeeeccCCC-CCeEE
Q 020798 137 ETVRIWDVKTGKCLKVLPAHS-DPV-TAVDFNRDGTMIVTSSY------DGLCRIWDA--STGHCMKTLIDDEN-PPVSF 205 (321)
Q Consensus 137 g~i~~wd~~~~~~~~~~~~~~-~~v-~~~~~~~~~~~l~~~~~------dg~i~~~d~--~~~~~~~~~~~~~~-~~~~~ 205 (321)
..+.+||+.+.+-...-+... ... .+++. -++.+++.|+. ...+..||+ .+..-......... .....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 468899988775332211111 111 22332 25566666653 235667776 33321111000111 11111
Q ss_pred EEEccCCCEEEEEecC----------------------CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEe
Q 020798 206 VKFSPNGKFILVGTLD----------------------NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263 (321)
Q Consensus 206 ~~~~~~g~~l~~~~~d----------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (321)
.+...++++++.|+.+ ..+.+||+.+.+-...-........... . ..+++.++.|
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~--~~~~~i~v~G 323 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS-L--PWNNSLLIIG 323 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE-E--EETTEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee-E--EeCCEEEEEe
Confidence 1233466677777632 2578899876543322111111111111 1 1367777777
Q ss_pred CCCC------eEEEEEcccceEEE
Q 020798 264 SEDS------CVYLWELQSRKVVQ 281 (321)
Q Consensus 264 ~~dg------~i~vwd~~~~~~~~ 281 (321)
+.++ .|.++++++.+.+.
T Consensus 324 G~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp EECGGGCEEEEEEEEEC-CCSCEE
T ss_pred eeCCCCCEeeeEEEEEEcCcEeEe
Confidence 7543 35556777766544
No 325
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.025 Score=46.18 Aligned_cols=194 Identities=10% Similarity=0.075 Sum_probs=100.2
Q ss_pred CEEEEEeCCCcEEEEecCCcceeeeeecC-cccEEEEEE--CC-CCCEEEEe-eCCCcEEEEecCCCEEEEEEeC----C
Q 020798 86 RFLVSASDDKTIRLWDVPTATCLKTLIGH-TNYVFCVNF--NP-QSNMIVSG-AFDETVRIWDVKTGKCLKVLPA----H 156 (321)
Q Consensus 86 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~--~~-~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~----~ 156 (321)
..++.++.||.|.-.|..+++..-.+... ..++....- .+ ++..++.. ..||.|+.++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46788999999999999998877665432 112211110 01 22333333 5899999999888754433321 1
Q ss_pred CCCeeE---EEE-c----cCCCEEEEEeCCCeEEEEeCCCCceeeeeccCCCCC------eEEEEEc-----cCCCEEEE
Q 020798 157 SDPVTA---VDF-N----RDGTMIVTSSYDGLCRIWDASTGHCMKTLIDDENPP------VSFVKFS-----PNGKFILV 217 (321)
Q Consensus 157 ~~~v~~---~~~-~----~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~------~~~~~~~-----~~g~~l~~ 217 (321)
..++.. ... . ..+..+++++.+|.+...|+++|+.+..+....... ..+.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 122211 000 0 135578899999999999999998877664332110 0011110 12356777
Q ss_pred EecCCeEEEEeCCCCcE----EEEEeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEE
Q 020798 218 GTLDNTLRLWNYSTGKI----LKTYTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQ 281 (321)
Q Consensus 218 ~~~d~~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (321)
+..+..+.+.+ ++++. ...+.................++.+ +.++.||.|.-+|..+++.+.
T Consensus 171 g~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777777766 44431 1111111000000000000013444 335677777777777776655
No 326
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.86 E-value=0.048 Score=41.32 Aligned_cols=141 Identities=11% Similarity=0.094 Sum_probs=76.6
Q ss_pred ccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCccccccccccc--------EEEEEECCCCCEEEEEeCCC
Q 020798 24 RAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQG--------VSDLVFSSDSRFLVSASDDK 95 (321)
Q Consensus 24 ~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~--------i~~~~~~~~~~~l~~~~~d~ 95 (321)
..+..++|+|+|.+.++ .++.+.-.+.. .... ..+-+-... ...+.|.|+|.+.++ .||
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~--------t~~~-~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG 107 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPP--------THDN-DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKD 107 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCC--------CSTT-CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETT
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCC--------CCCc-ccccccccEecccccccceEEEECCCCCEEEe--CCC
Confidence 36779999999997776 56655333211 0000 111111222 378899999987766 569
Q ss_pred cEEEEecCCccee------eee-ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE------EEEEEe-CCCCCee
Q 020798 96 TIRLWDVPTATCL------KTL-IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK------CLKVLP-AHSDPVT 161 (321)
Q Consensus 96 ~i~iwd~~~~~~~------~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~------~~~~~~-~~~~~v~ 161 (321)
.|.-++..+.... ..+ ..-=..+..+.+.|+|.+.+.. |+.++-...-++. ....+. .....-.
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr 185 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFK 185 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEE
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEE
Confidence 9888876442211 011 1111356899999999877766 7775433221110 001111 2222334
Q ss_pred EEEEccCCCEEEEEeCCCeE
Q 020798 162 AVDFNRDGTMIVTSSYDGLC 181 (321)
Q Consensus 162 ~~~~~~~~~~l~~~~~dg~i 181 (321)
.+.|.+++.+.++. ++.+
T Consensus 186 ~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 186 FLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEEECTTSCEEEEE--TTEE
T ss_pred EEEECCCCcEEEEe--CCeE
Confidence 46688888766555 6643
No 327
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.83 E-value=0.18 Score=42.40 Aligned_cols=143 Identities=15% Similarity=0.145 Sum_probs=89.9
Q ss_pred CCCCEEEEEeCCCcEEEEecCCcceeeeeecC----cccEEEEEECCCCCEEEEeeCCCcEEEEecCCCE----------
Q 020798 83 SDSRFLVSASDDKTIRLWDVPTATCLKTLIGH----TNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGK---------- 148 (321)
Q Consensus 83 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~---------- 148 (321)
.+|..++.+ .++.||.-++......+.+... -..+..+..+|+|++|+..+. ..|.+..+..+.
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 445545443 2366776676644333333322 224677999999999988764 578888775221
Q ss_pred --EEEEEeC------CCCCeeEEEEccC---CCEEEEEeCCCeEEEEeCCCCce-eeeec--------cCCCCCeEEEEE
Q 020798 149 --CLKVLPA------HSDPVTAVDFNRD---GTMIVTSSYDGLCRIWDASTGHC-MKTLI--------DDENPPVSFVKF 208 (321)
Q Consensus 149 --~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~-~~~~~--------~~~~~~~~~~~~ 208 (321)
..+.+.. ...+|..+.|+|- +..|++-..|+.|++||+..... ...+. ......+.+++|
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 1122221 2567999999995 45899999999999999975221 11111 111245788999
Q ss_pred ccCCCEEEEEe--cCCeEEEE
Q 020798 209 SPNGKFILVGT--LDNTLRLW 227 (321)
Q Consensus 209 ~~~g~~l~~~~--~d~~i~i~ 227 (321)
.+++-.|.+.+ ..|.|.-.
T Consensus 188 g~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEE
T ss_pred cCCCcEEEEEecCCCCCEEEE
Confidence 99887777755 67777554
No 328
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.74 E-value=0.19 Score=41.49 Aligned_cols=197 Identities=15% Similarity=0.118 Sum_probs=101.7
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccc---cccccccEEEEEECCC---CCEEEEEeC---
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQK---FTGHEQGVSDLVFSSD---SRFLVSASD--- 93 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~---~~~h~~~i~~~~~~~~---~~~l~~~~~--- 93 (321)
......++|.|+|+++++ ..++.|.+++.... ..+.. ..........|+++|+ +..|+.+..
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~G~--------~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISPSGK--------KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECSSCE--------EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeCCCc--------eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 456678999999985555 45588887752211 11111 1122356889999997 444444332
Q ss_pred -C----CcEEEEecCCc--c-----ee-eeeec-CcccEEEEEECCCCCEEEEeeC-------------CCcEEEEecCC
Q 020798 94 -D----KTIRLWDVPTA--T-----CL-KTLIG-HTNYVFCVNFNPQSNMIVSGAF-------------DETVRIWDVKT 146 (321)
Q Consensus 94 -d----~~i~iwd~~~~--~-----~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~wd~~~ 146 (321)
+ +.|..|+.... . .+ ..+.. .......++|.|+|.++++.+. .|.|..++...
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 3 56777776543 1 11 11211 1112356899999987776432 24555555432
Q ss_pred C---------EEEEEEeCCCCCeeEEEEcc-CCCEEEEEeCCC---eEEEEeCCC--------C--------ceeeeecc
Q 020798 147 G---------KCLKVLPAHSDPVTAVDFNR-DGTMIVTSSYDG---LCRIWDAST--------G--------HCMKTLID 197 (321)
Q Consensus 147 ~---------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~~~d~~~--------~--------~~~~~~~~ 197 (321)
. ..+. ...+. ....++|+| +++++++-.... .|.+..... + .....+ .
T Consensus 179 ~~p~~npf~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~ 255 (354)
T 3a9g_A 179 RPPADNPFPNSPIW-SYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDT-G 255 (354)
T ss_dssp CCCTTSSSTTCCEE-EECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-T
T ss_pred CCCCCCCCCCCcEE-EEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeec-C
Confidence 1 0111 11232 346799999 666555433222 244332111 0 000111 0
Q ss_pred CCCCCeEEEEEc-------cCCCEEEEEecCCeEEEEeCCC
Q 020798 198 DENPPVSFVKFS-------PNGKFILVGTLDNTLRLWNYST 231 (321)
Q Consensus 198 ~~~~~~~~~~~~-------~~g~~l~~~~~d~~i~i~d~~~ 231 (321)
........+++. .+|.++++....+.|..+++..
T Consensus 256 ~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 256 SETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp TCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred CCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 112235667773 5676666655667788888764
No 329
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.55 E-value=0.25 Score=40.51 Aligned_cols=226 Identities=14% Similarity=0.135 Sum_probs=120.2
Q ss_pred ccEEEEEECCCCCEEEEEeCCCcEEEEecCCcce--eeee----ecCcccEEEEEECCC---CCEEEEe---eCCCcEEE
Q 020798 74 QGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATC--LKTL----IGHTNYVFCVNFNPQ---SNMIVSG---AFDETVRI 141 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~dg~i~~ 141 (321)
.....|+|.|+|+++++--..|.|++++...++. +..+ ..-......++++|+ +..|+.. ..+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 3467899999999777665589999998655442 1111 112345789999995 3444432 23455666
Q ss_pred EecCCC----------EEE-EEEeC-CCCCeeEEEEccCCCEEEEEeC-------------CCeEEEEeCCCCc------
Q 020798 142 WDVKTG----------KCL-KVLPA-HSDPVTAVDFNRDGTMIVTSSY-------------DGLCRIWDASTGH------ 190 (321)
Q Consensus 142 wd~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~~d~~~~~------ 190 (321)
|....+ +.+ ..++. .......+.|.|+|.++++.+. .|.|.-.+....-
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 655431 111 12321 1123457999999987776542 2333333433210
Q ss_pred -eeeeeccCCCCCeEEEEEccCCCEEEEEe-cCC--eEEEEeCCCCc------------------EEEEEeccCCceeEE
Q 020798 191 -CMKTLIDDENPPVSFVKFSPNGKFILVGT-LDN--TLRLWNYSTGK------------------ILKTYTGHTNSKYCI 248 (321)
Q Consensus 191 -~~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~d~--~i~i~d~~~~~------------------~~~~~~~~~~~~~~~ 248 (321)
....+...+ .....++|+|+|.+.++-. .++ .|.+. ..+. ++..+..+.... .
T Consensus 192 ~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i--~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap--~ 266 (347)
T 3das_A 192 PGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAI--KPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP--S 266 (347)
T ss_dssp TTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEE--CTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE--E
T ss_pred CCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEE--cCCCEecCCcccCCCCCccccCCcEecCCCCCCC--c
Confidence 001111122 2245689999887665432 222 23332 1111 111121111111 1
Q ss_pred EeEEEecCCeEEEEeCCCCeEEEEEcccceE----EEEecCCCCCeEEEEecCCCceEEEEe
Q 020798 249 SSTFSVTNGKYIVSGSEDSCVYLWELQSRKV----VQKLEGHTDPVISVASHPTENIIASGA 306 (321)
Q Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~h~~~v~~~~~~p~~~~l~s~~ 306 (321)
...+. ++..+...-..+.|....+..... ...+.+...++.+|+..|||.++++-.
T Consensus 267 G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 267 GIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred ceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 22222 567676666666676666654432 223444456899999999998877753
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.40 E-value=0.28 Score=39.54 Aligned_cols=190 Identities=13% Similarity=0.095 Sum_probs=90.8
Q ss_pred CCCCCEEEEEeC----CC-------cEEEEecCCcceeee--eecCcccEEEEEECCCCCEEEEeeCC-------CcEEE
Q 020798 82 SSDSRFLVSASD----DK-------TIRLWDVPTATCLKT--LIGHTNYVFCVNFNPQSNMIVSGAFD-------ETVRI 141 (321)
Q Consensus 82 ~~~~~~l~~~~~----d~-------~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~~ 141 (321)
..+++.++.|+. ++ .+.+||..+.+.... +.........+.+ ++..++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 456777777773 11 177788876653221 1110111112222 45566666653 24778
Q ss_pred EecCCCEEEEEEeCCCCCe-eEEEEccCCCEEEEEeC------CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCE
Q 020798 142 WDVKTGKCLKVLPAHSDPV-TAVDFNRDGTMIVTSSY------DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKF 214 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 214 (321)
||+.+.+-...-+...... .+++. .++.+++.|+. -..+.+||+.+.+-...........-..+. .-+++.
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i 209 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVA-IHKGKI 209 (318)
T ss_dssp EETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEE
T ss_pred EeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEE-EECCEE
Confidence 8887765332211111111 12222 45666677653 235888998876432211111111111122 236677
Q ss_pred EEEEecC-----CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEeCCC--------------CeEEEEEcc
Q 020798 215 ILVGTLD-----NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSGSED--------------SCVYLWELQ 275 (321)
Q Consensus 215 l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------------g~i~vwd~~ 275 (321)
++.|+.+ ..+.+||+.+.+-...-.... ........ ..++.+++.|+.+ ..+.+||..
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ-ERSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTTCCEEECCCCSS-CCBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETT
T ss_pred EEEcCcCCCCccceEEEEECCCCeEEECCCCCC-cccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCC
Confidence 7777643 357889988765433211111 11111111 2357777777654 347778877
Q ss_pred cce
Q 020798 276 SRK 278 (321)
Q Consensus 276 ~~~ 278 (321)
+.+
T Consensus 287 ~~~ 289 (318)
T 2woz_A 287 KKE 289 (318)
T ss_dssp TTE
T ss_pred CCE
Confidence 654
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.36 E-value=0.57 Score=42.56 Aligned_cols=196 Identities=9% Similarity=0.071 Sum_probs=97.5
Q ss_pred CCCCEEEEeeCC----CcEEEEecCCCEEEEEE-e-----CCCC-CeeEEEEcc-CCCEEEEEeCC------CeEEEEeC
Q 020798 125 PQSNMIVSGAFD----ETVRIWDVKTGKCLKVL-P-----AHSD-PVTAVDFNR-DGTMIVTSSYD------GLCRIWDA 186 (321)
Q Consensus 125 ~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~-~-----~~~~-~v~~~~~~~-~~~~l~~~~~d------g~i~~~d~ 186 (321)
.++..++.|+.+ ..+.+||..+++-...- + .... .-.+++..+ ++..++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 345666777643 45788888776532221 1 1111 112333333 67777777643 24778888
Q ss_pred CCCceeeeeccCCCCCeEEEEEccCCCEEEEEecCC--eEEEEeCCCCcEEEEEec--cCCceeEEE-eEEEecCCeEEE
Q 020798 187 STGHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDN--TLRLWNYSTGKILKTYTG--HTNSKYCIS-STFSVTNGKYIV 261 (321)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~--~i~i~d~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~l~ 261 (321)
.+..-...-.......-..+....+++.++.|+.++ .+.+||..+.+....-.. ...+..... ..+...++..++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 765322111001111111233324788888887654 699999887654332210 000111111 122222266777
Q ss_pred EeCC--C-----CeEEEEEcccceE-----EEEecC---CCCCeEEEEecCCCceEEEEeecCC------ccEEEccccc
Q 020798 262 SGSE--D-----SCVYLWELQSRKV-----VQKLEG---HTDPVISVASHPTENIIASGALDND------RTVKIWTQEK 320 (321)
Q Consensus 262 ~~~~--d-----g~i~vwd~~~~~~-----~~~~~~---h~~~v~~~~~~p~~~~l~s~~~d~~------~~i~iw~~~~ 320 (321)
.|+. + ..+.+||+.+..- -..+.. ....-.+++...++.+++.||.+.+ ..|.+||.+.
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 7765 2 3588999877651 111111 1111122333333778888876432 3578887753
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.35 E-value=0.3 Score=41.84 Aligned_cols=106 Identities=13% Similarity=0.170 Sum_probs=57.8
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccc------cccccEEEEEECCC---CCEEEEE-e
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT------GHEQGVSDLVFSSD---SRFLVSA-S 92 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~------~h~~~i~~~~~~~~---~~~l~~~-~ 92 (321)
......++|.|+|+++++-...+.|.+++..... ...+..+. ....+...|+|+|+ +..|+.+ +
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~------~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGS------VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC------EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc------EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 3456799999999977776544567666432110 00111111 13467889999995 4444433 2
Q ss_pred C------------CCcEEEEecCCc-------ceee-eee-cCcccEEEEEECCCCCEEEEee
Q 020798 93 D------------DKTIRLWDVPTA-------TCLK-TLI-GHTNYVFCVNFNPQSNMIVSGA 134 (321)
Q Consensus 93 ~------------d~~i~iwd~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~ 134 (321)
. ...|..++.... +.+. .+. ........++|.|||.++++.+
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2 134555554321 1111 111 1112367899999998777644
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.02 E-value=0.63 Score=39.83 Aligned_cols=103 Identities=13% Similarity=0.146 Sum_probs=60.1
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCccee--eeeec------CcccEEEEEECCC---CCEEEEeeC--------
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCL--KTLIG------HTNYVFCVNFNPQ---SNMIVSGAF-------- 135 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~~~~~-------- 135 (321)
....|+|.|+|+++++-...+.|.+++..+++.. ..+.. .......++++|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4578999999997776544457888876544321 11211 1345678999996 555544332
Q ss_pred -----CCcEEEEecCCC--E-----EEE-EEeC-CCCCeeEEEEccCCCEEEEEeC
Q 020798 136 -----DETVRIWDVKTG--K-----CLK-VLPA-HSDPVTAVDFNRDGTMIVTSSY 177 (321)
Q Consensus 136 -----dg~i~~wd~~~~--~-----~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~ 177 (321)
...|..++...+ + .+. .++. .......++|.|+|.++++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555654321 1 111 1221 1234678999999987776543
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.84 E-value=1.1 Score=43.75 Aligned_cols=198 Identities=9% Similarity=0.190 Sum_probs=101.6
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-EEEEEEeCC-
Q 020798 79 LVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-KCLKVLPAH- 156 (321)
Q Consensus 79 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~- 156 (321)
.-.+|..+.+|.=. ..++.|+|+++...+++..-.. .|.-=.|-.+.. |+-.+ +..|+-|++... .+.+.+..|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 45678877666543 6789999998887666654333 333334443333 32222 357999998642 333333333
Q ss_pred ---CCCeeEEEEccCCCEEEEEe-------CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEc--cCCCEEEE-Ee---c
Q 020798 157 ---SDPVTAVDFNRDGTMIVTSS-------YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFS--PNGKFILV-GT---L 220 (321)
Q Consensus 157 ---~~~v~~~~~~~~~~~l~~~~-------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~l~~-~~---~ 220 (321)
...|..-..+++.++++..+ -.|.+.+|..+.+. .....+|......+... +....+++ +. .
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc--chhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 34566666677888765433 24677888765432 11111111111111110 11111222 11 1
Q ss_pred CCeEEEEeCCCC---c------EEEE-EeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 221 DNTLRLWNYSTG---K------ILKT-YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 221 d~~i~i~d~~~~---~------~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
.+.++|.++... . .+.. ++........+....+ +....+..-+.-|.|.+||+.++..+..-
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs-~k~g~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEec-cccCEEEEEecCceEEEEecccchhhhhc
Confidence 257888887432 1 0111 1111112233333333 34455666788899999999998876543
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.21 E-value=1.8 Score=39.63 Aligned_cols=231 Identities=12% Similarity=0.142 Sum_probs=122.6
Q ss_pred cccEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeee-ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEE
Q 020798 73 EQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL-IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLK 151 (321)
Q Consensus 73 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 151 (321)
...|.+|.-..+|.+ -.|+.+| +..||-...+..... ......|.++....++ .|..++.+| +..||..+.+...
T Consensus 21 ~n~V~~I~qD~~G~l-WigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~ 96 (758)
T 3ott_A 21 ASVVSCFLQDSEGLI-WIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ 96 (758)
T ss_dssp CCCEEEEEECTTSCE-EEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC
T ss_pred cceEEEEEECCCCCE-EEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC
Confidence 356888888888764 4466676 666774332211100 1123458887777665 455555555 7889987765322
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec---cCCCCCeEEEEEccCCCEEEEEecCCeEEEEe
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTLI---DDENPPVSFVKFSPNGKFILVGTLDNTLRLWN 228 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d 228 (321)
........|.++.. .++ .+..++.+ -+..+|..+++...... ......+..+....+|.+.+ ++.+ -|..|+
T Consensus 97 ~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~ 171 (758)
T 3ott_A 97 PETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYI 171 (758)
T ss_dssp CSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEE
T ss_pred cccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCc
Confidence 11111234666653 345 45556665 57788877654322100 11223477777777777654 4544 477888
Q ss_pred CCCCcEEEEEeccCC---ceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 229 YSTGKILKTYTGHTN---SKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 229 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
..+++.. .+..... ....+...+...++..|..|+. +-|..+|..+++...........|.++....++.+.+..
T Consensus 172 ~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 172 PSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp TTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE
T ss_pred cCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe
Confidence 7766533 2221110 1111333333344444444443 457788877654322111123468888888787776643
Q ss_pred eecCCccEEEccc
Q 020798 306 ALDNDRTVKIWTQ 318 (321)
Q Consensus 306 ~~d~~~~i~iw~~ 318 (321)
+ +| +.+++.
T Consensus 250 --~-~G-l~~~~~ 258 (758)
T 3ott_A 250 --D-NG-LYVYHN 258 (758)
T ss_dssp --T-TE-EEEECC
T ss_pred --C-Cc-eeEEec
Confidence 2 23 555554
No 336
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.02 E-value=1.1 Score=36.23 Aligned_cols=234 Identities=11% Similarity=0.157 Sum_probs=129.6
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc-ce
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA-TC 107 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~ 107 (321)
.-.+|..+.+|.=. ...+.+++++... .+..+.- ...|.--.|-.+. .|+..+ +..|+-|+++.. .+
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~--------klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P 139 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKS--------KMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP 139 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTE--------EEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCC
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhh--------hhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCC
Confidence 34578888777654 6789999876421 1111111 2344444555433 344333 357999998753 44
Q ss_pred eeeeecCc----ccEEEEEECCCCCEEEEee-------CCCcEEEEecCCCEEEEEEeCCCCCeeEEEEc--cC-CCEEE
Q 020798 108 LKTLIGHT----NYVFCVNFNPQSNMIVSGA-------FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN--RD-GTMIV 173 (321)
Q Consensus 108 ~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l~ 173 (321)
.+-+..|. ..|..-..+++.++++..+ -.|.+.+|..+.+. -+.+.+|......+... +. ..+++
T Consensus 140 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~ 218 (365)
T 2xzh_A 140 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFC 218 (365)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEE
T ss_pred ceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEE
Confidence 44444443 3466666788888765433 23678888876553 44556665433222221 11 12344
Q ss_pred EEeC---CCeEEEEeCCCC---c-e----eeee-ccC--CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 174 TSSY---DGLCRIWDASTG---H-C----MKTL-IDD--ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 174 ~~~~---dg~i~~~d~~~~---~-~----~~~~-~~~--~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
.+.. .+.+++.++... . . ...+ ... ...-.-.+..++.-..+..-+.-|.|++||+.++..+..-.
T Consensus 219 fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 219 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp EEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec
Confidence 4432 257888887432 1 0 1111 111 11123356777777788888999999999999999887765
Q ss_pred ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce
Q 020798 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
-...++. ++ +.....+. +++-...|.|.-..+....
T Consensus 299 IS~d~iF-~t-a~~~~~~G-i~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 299 ISGETIF-VT-APHEATAG-IIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp CCSSCEE-EE-EEEGGGTE-EEEEETTCEEEEEEECTTT
T ss_pred cCCCceE-Ee-cccCCCCc-EEEEcCCCEEEEEEECccc
Confidence 5444432 22 22222333 3444577777666665544
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.77 E-value=0.14 Score=41.91 Aligned_cols=116 Identities=11% Similarity=0.202 Sum_probs=69.8
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeccCCCCCeEEEEE--c-cCCCEEEEE-ecCCeEEEEeCCCCcEEEEEeccC--C
Q 020798 170 TMIVTSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKF--S-PNGKFILVG-TLDNTLRLWNYSTGKILKTYTGHT--N 243 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--~-~~g~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~--~ 243 (321)
..++.++.||.+.-+|..+|+..-++......++....- . .++..++.. ..||.|..++..+|.....+.... .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 478889999999999999988766654331111111100 0 123333333 579999999998885544332211 0
Q ss_pred -ceeEEEeEEEe------cCCeEEEEeCCCCeEEEEEcccceEEEEecC
Q 020798 244 -SKYCISSTFSV------TNGKYIVSGSEDSCVYLWELQSRKVVQKLEG 285 (321)
Q Consensus 244 -~~~~~~~~~~~------~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 285 (321)
........... ..+..+++|+.+|.+...|+++++.+..+..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 00000000000 1466788999999999999999999888753
No 338
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.61 E-value=1.4 Score=35.33 Aligned_cols=174 Identities=9% Similarity=0.075 Sum_probs=94.0
Q ss_pred EECCCCCEEEEEeCC--------------CcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEee----CCCcEEE
Q 020798 80 VFSSDSRFLVSASDD--------------KTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGA----FDETVRI 141 (321)
Q Consensus 80 ~~~~~~~~l~~~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~~ 141 (321)
-+++++++|+.+... ..|+..++...+.. .+.. .. ...+++++++|+-.. ....|+.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDP--DP--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEEC--SC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eeec--CC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 457888888766443 35666777665432 2221 11 225677888887665 3445666
Q ss_pred EecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeC-CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec
Q 020798 142 WDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSY-DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL 220 (321)
Q Consensus 142 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 220 (321)
.++.... ...+..+.. .+++|+++.|+-.+. ...|...++..+.. +.+... .. ...+.|++.+|+-...
T Consensus 134 ~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~-~~l~~~---~~-~~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 134 IRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE-ALFYDC---NC-YKPVVLDDTNVYYMDV 203 (302)
T ss_dssp EETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE-EEEECS---CE-EEEEEEETTEEEEEEG
T ss_pred EECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE-EEEeCC---Cc-cceeeecCCEEEEEEc
Confidence 6665433 333433332 346778887776654 67888888876543 233221 12 2346688888877654
Q ss_pred C--CeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEe--CCCCeEEEEEccc
Q 020798 221 D--NTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG--SEDSCVYLWELQS 276 (321)
Q Consensus 221 d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~dg~i~vwd~~~ 276 (321)
. ..|..-++.... ...+.. ... . .+ .+++.+|.-+ ...+.|..-++..
T Consensus 204 ~~~~~I~~~~ldG~~-~~~Lt~--~~~---~-~~-~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 204 NRDNAIVHVNINNPN-PVVLTE--ANI---E-HY-NVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp GGTTEEEEECSSSCC-CEECSC--SCE---E-EE-EEETTEEEEEECSSSCEEEEEETTS
T ss_pred CCCcEEEEEECCCCC-eEEEeC--CCc---c-eE-EECCCEEEEEECCCCcEEEEEECCC
Confidence 3 356666665443 222321 111 1 12 2345555533 3345666666654
No 339
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.48 E-value=1.7 Score=35.64 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=48.1
Q ss_pred EEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeee--e---ccCCCCCeEEEEEccC---CCEEEEE-e--c
Q 020798 152 VLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKT--L---IDDENPPVSFVKFSPN---GKFILVG-T--L 220 (321)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~--~---~~~~~~~~~~~~~~~~---g~~l~~~-~--~ 220 (321)
.+...-...+.++|.|+|+++++--..|.|++++...+..... + ..........++++|+ +.+|.+. + .
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3333345668999999998766665589999998765543211 1 1122345678999995 3344432 2 3
Q ss_pred CCeEEEEeCCC
Q 020798 221 DNTLRLWNYST 231 (321)
Q Consensus 221 d~~i~i~d~~~ 231 (321)
++.|.-|.+..
T Consensus 106 ~~~v~R~~~~~ 116 (347)
T 3das_A 106 DNRIVRMLYDE 116 (347)
T ss_dssp SEEEEEEEBCT
T ss_pred CCEEEEEEeCC
Confidence 45566665543
No 340
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.09 E-value=1.9 Score=34.90 Aligned_cols=209 Identities=11% Similarity=0.223 Sum_probs=118.8
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC-CEEEEEEeCC
Q 020798 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT-GKCLKVLPAH 156 (321)
Q Consensus 78 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~ 156 (321)
+.-.+|..+.+|.-. ...+.++|+++.+.++...-. +.|.-=.|-.+. .|+-.. +..|+-|++.. ..+.+.+..|
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 345689888777654 678999999999887776543 344444554443 333322 35799999864 3455555544
Q ss_pred C----CCeeEEEEccCCCEEEEEe---C----CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCC-----EEEEEec
Q 020798 157 S----DPVTAVDFNRDGTMIVTSS---Y----DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGK-----FILVGTL 220 (321)
Q Consensus 157 ~----~~v~~~~~~~~~~~l~~~~---~----dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~l~~~~~ 220 (321)
. ..|..-..+++.++++..+ . .|.+.+|..+.+. ......|. .....+-.+|+ .+..+..
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGha--a~F~~~~~~g~~~~~~lf~fa~r 222 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHA--ASFAQFKMEGNAEESTLFCFAVR 222 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE--EEEECCSE--EEEEEECCTTCSSCEEEEEEEEE
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc--cceeeeee--eeeEEEecCCCCCCceEEEEEEe
Confidence 3 3455666677888665443 2 3567888776542 22222222 12222322221 2222221
Q ss_pred ---CCeEEEEeCCCC--------c-EEEEE-eccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC
Q 020798 221 ---DNTLRLWNYSTG--------K-ILKTY-TGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287 (321)
Q Consensus 221 ---d~~i~i~d~~~~--------~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~ 287 (321)
.+.++|.++... + .+..+ .........+....+ +.-..+..-+.-|.|++||++++.++..-+--.
T Consensus 223 ~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs-~kygviyviTK~G~ihlyDleTgt~i~~nrIS~ 301 (365)
T 2xzh_A 223 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 301 (365)
T ss_dssp ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEE-TTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEec-ccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC
Confidence 257888887432 1 11111 111223344544444 344566667888999999999999887665555
Q ss_pred CCeEEEEe
Q 020798 288 DPVISVAS 295 (321)
Q Consensus 288 ~~v~~~~~ 295 (321)
++|...+-
T Consensus 302 d~iF~ta~ 309 (365)
T 2xzh_A 302 ETIFVTAP 309 (365)
T ss_dssp SCEEEEEE
T ss_pred CceEEecc
Confidence 56654443
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.83 E-value=1.4 Score=38.48 Aligned_cols=72 Identities=11% Similarity=0.131 Sum_probs=49.7
Q ss_pred eeEEEEccCCCEEEEEe-CCCeEEEEeCCCCce-----------eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEE
Q 020798 160 VTAVDFNRDGTMIVTSS-YDGLCRIWDASTGHC-----------MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLW 227 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~ 227 (321)
...+..+|||++++.++ -+.++.++|.+.-.. ...-....+......+|+++|....+-..|.+|.-|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 46788999999888776 478999999874211 000011223446678999999555555689999999
Q ss_pred eCCC
Q 020798 228 NYST 231 (321)
Q Consensus 228 d~~~ 231 (321)
++..
T Consensus 405 ni~~ 408 (638)
T 3sbq_A 405 NMEE 408 (638)
T ss_dssp EHHH
T ss_pred eccH
Confidence 9865
No 342
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.44 E-value=3.2 Score=35.17 Aligned_cols=210 Identities=12% Similarity=0.250 Sum_probs=118.4
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC-CEEEEEEeCC
Q 020798 78 DLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT-GKCLKVLPAH 156 (321)
Q Consensus 78 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~ 156 (321)
+.-.+|..+.+|.=. ...+.|+|+++...++...-...-++- .|-.+ +.|+-.+ +..|+-|++.. ..+.+.+..|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfW-kWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFW-KWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEE-EEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEECC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEE-EecCC-CeEEEEc-CCeeEEecccCCCCchhheecc
Confidence 456788888777654 678999999998877776544433332 33332 3343333 35799999864 3455555544
Q ss_pred C----CCeeEEEEccCCCEEEEEe-------CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCC-----CEEEEEec
Q 020798 157 S----DPVTAVDFNRDGTMIVTSS-------YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNG-----KFILVGTL 220 (321)
Q Consensus 157 ~----~~v~~~~~~~~~~~l~~~~-------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~l~~~~~ 220 (321)
. ..|..-..+++.++++..+ -.|.+.+|..+.+. ......|.. ....+-.+| ..+..+..
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa--~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAA--SFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC--EEEECCSEE--EEEEEECTTCSSEEEEEEEEEC
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc--cchheeeee--eeEEEecCCCCCCceEEEEEEe
Confidence 3 3455666678888766443 23567888776432 222223221 222222222 12222322
Q ss_pred ---CCeEEEEeCCCC--------cE-EEE-EeccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceEEEEecCCC
Q 020798 221 ---DNTLRLWNYSTG--------KI-LKT-YTGHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKLEGHT 287 (321)
Q Consensus 221 ---d~~i~i~d~~~~--------~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~ 287 (321)
.+.++|.++... +. +.. +.........+....+ +....+..-+.-|.|.+||+.++.++..-+--.
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs-~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEE-TTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEec-ccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 268888887432 11 111 1111223344544444 345566667888999999999999887655445
Q ss_pred CCeEEEEec
Q 020798 288 DPVISVASH 296 (321)
Q Consensus 288 ~~v~~~~~~ 296 (321)
++|.-.+.+
T Consensus 301 ~~iF~t~~~ 309 (494)
T 1bpo_A 301 ETIFVTAPH 309 (494)
T ss_dssp SCEEEEEEE
T ss_pred CceEEeccc
Confidence 555444433
No 343
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.32 E-value=6.8 Score=38.64 Aligned_cols=233 Identities=12% Similarity=0.164 Sum_probs=118.4
Q ss_pred ECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc-ceee
Q 020798 31 FSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA-TCLK 109 (321)
Q Consensus 31 ~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~ 109 (321)
.+|..+.+|.=. ...+.++++...... ..+.- ...|.--.|-.+. .|+..+ +..|.-|++... .+.+
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~kl--------ks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k 140 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKM--------KAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVK 140 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhh--------ccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHH
Confidence 466666666543 677888877543221 11111 1233333454333 343332 457999999643 3333
Q ss_pred eeecC----cccEEEEEECCCCCEEEEee-------CCCcEEEEecCCCEEEEEEeCCCCCeeEEEEc--cC-CCEEEEE
Q 020798 110 TLIGH----TNYVFCVNFNPQSNMIVSGA-------FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFN--RD-GTMIVTS 175 (321)
Q Consensus 110 ~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l~~~ 175 (321)
-+..| ...|..-..+++.++++..| -.|.+.+|..+.+. .+.+.+|......+... +. ...++.+
T Consensus 141 ~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred HHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEE
Confidence 33333 34455666678888765432 34778888775432 33344554433332221 11 1233333
Q ss_pred eC---CCeEEEEeCCCC---c-ee-ee----eccC--CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 020798 176 SY---DGLCRIWDASTG---H-CM-KT----LIDD--ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGH 241 (321)
Q Consensus 176 ~~---dg~i~~~d~~~~---~-~~-~~----~~~~--~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 241 (321)
.. .+.+++.++... . .. +. .... ...-.-.+..++.-..+..-+.-|.|.+||+.++..+..-.-.
T Consensus 220 ~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris 299 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (1630)
T ss_pred EecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcccc
Confidence 22 367888887432 1 10 11 1111 0111234667777677888889999999999999877554333
Q ss_pred CCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccceE
Q 020798 242 TNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRKV 279 (321)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (321)
..++.. + +...+.+. +++....|.|.-..+.....
T Consensus 300 ~~~iF~-~-~~~~~~~g-~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 300 GETIFV-T-APHEATAG-IIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred CCceEE-e-ccCCCCCc-eEEEcCCceEEEEEEccchh
Confidence 333221 1 11222233 33445667666555554443
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.43 E-value=8.3 Score=35.27 Aligned_cols=260 Identities=14% Similarity=0.166 Sum_probs=139.1
Q ss_pred cccEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 23 LRAISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 23 ~~~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
...|.++.-..+|. |..|+.+| +..||-........ .. . .....|.++.-..++. |-.|+.+| +..||.
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~--~~---~--~~~~~i~~i~~d~~g~-lWigT~~G-l~~yd~ 89 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFT--YG---E--NNNTRIYCGVIIDNTY-LYMGTDNG-ILVYNY 89 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSC--TT---S--TTSSCEEEEEEETTTE-EEEEETTE-EEEEET
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEc--cC---C--CCCceEEEEEEcCCCc-EEEEeCCC-eEEEeC
Confidence 46799999888885 44555566 44565322111000 00 0 1234688887777765 55566665 788998
Q ss_pred CCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEE----eCCCCCeeEEEEccCCCEEEEEeCC
Q 020798 103 PTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVL----PAHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
.+.+...........|.++.. .++ .|..++.+ -+..+|..+++..... ......|.++...+++.+.+ ++.+
T Consensus 90 ~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~ 165 (758)
T 3ott_A 90 RADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN 165 (758)
T ss_dssp TTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT
T ss_pred CCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC
Confidence 765432211111234666654 344 45555555 5788888765533220 11234577887777777554 4454
Q ss_pred CeEEEEeCCCCceeeeeccC----CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEe
Q 020798 179 GLCRIWDASTGHCMKTLIDD----ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSV 254 (321)
Q Consensus 179 g~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (321)
| +..++..+++........ ....+..+...+++..|.+|+. +-+..+|..+++... +... ....+...+..
T Consensus 166 G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l--~~~~i~~i~~d 240 (758)
T 3ott_A 166 G-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAF--HNNSIKSLALD 240 (758)
T ss_dssp E-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEE-EEEE--EEEEEEEEEEC
T ss_pred C-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCC--CCCeEEEEEEc
Confidence 4 667887665432211111 1123677777777665555554 458889987665432 2111 11123334444
Q ss_pred cCCeEEEEeCCCCeEEEEEcccceEEEEec-------CCCCCeEEEEecCCCceEEE
Q 020798 255 TNGKYIVSGSEDSCVYLWELQSRKVVQKLE-------GHTDPVISVASHPTENIIAS 304 (321)
Q Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------~h~~~v~~~~~~p~~~~l~s 304 (321)
.+|.+.+ |+.+ -+.+++..+.+...... -....|.++....+|.+-+.
T Consensus 241 ~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiG 295 (758)
T 3ott_A 241 GNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLG 295 (758)
T ss_dssp TTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEE
T ss_pred CCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEE
Confidence 4555444 4444 57788876654322111 02245888888777766553
No 345
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=90.39 E-value=6 Score=31.81 Aligned_cols=195 Identities=10% Similarity=0.072 Sum_probs=105.2
Q ss_pred CCCCEEEEecCCceEEEeeccccCCCCCCC-CCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC---Cc---
Q 020798 33 HDGRLLASSSADKTLLTYSLSSISNSDSTP-PSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP---TA--- 105 (321)
Q Consensus 33 ~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~--- 105 (321)
|+..++++.+.+|.++--.+..+....... ......+... +.+..+........++..+..|.++-.... ..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 566788889999999988776553322110 1101122222 334444444455567777888887666542 21
Q ss_pred ---cee---eeeecCcccEEEEEECC---CCCEEEEeeCCCcEEEEecCC-------CEEEEEEeCCCCCeeEEEEccCC
Q 020798 106 ---TCL---KTLIGHTNYVFCVNFNP---QSNMIVSGAFDETVRIWDVKT-------GKCLKVLPAHSDPVTAVDFNRDG 169 (321)
Q Consensus 106 ---~~~---~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~~~ 169 (321)
..+ ..+. ..+.+..+...+ +...++..+..|.++.-.+.. +.....+.. .+.+..+......
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 100 0111 123344443322 456788889999998887632 222222333 4455555554445
Q ss_pred CEEEEEeCCCeEEEEeCCCCce-------eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 170 TMIVTSSYDGLCRIWDASTGHC-------MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
..++..+.+|.+..+....-.. +..+....+..+..+..-.++..+++.+..|..+...+.
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 6788888899888876543111 111111223344444444456678888888988888764
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.13 E-value=6.2 Score=31.55 Aligned_cols=139 Identities=8% Similarity=0.044 Sum_probs=76.2
Q ss_pred CCCCEEEEEe--CCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCC--------------CcEEEEecCC
Q 020798 83 SDSRFLVSAS--DDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFD--------------ETVRIWDVKT 146 (321)
Q Consensus 83 ~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~~wd~~~ 146 (321)
+++.+++... .++.|...+.+... ...+.. .. +--+++++++|+-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 4666666553 24556555654433 222321 12 23457788887766542 3577777765
Q ss_pred CEEEEEEeCCCCCeeEEEEccCCCEEEEEe----CCCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEec-C
Q 020798 147 GKCLKVLPAHSDPVTAVDFNRDGTMIVTSS----YDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGTL-D 221 (321)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-d 221 (321)
++... +.. .. ...|+++++.++-.. ....|...++.... ...+..... .+++++++.|.-.+. .
T Consensus 98 ~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~-----~~~~~~g~~iy~t~~g~ 166 (302)
T 3s25_A 98 HGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL-----FTCNTSDRYFYYNNPKN 166 (302)
T ss_dssp CCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC-----CCSEEETTEEEEECTTT
T ss_pred CcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc-----eEeeEECCEEEEEeCCC
Confidence 54322 221 22 236778888887665 34456666666432 333332211 345778888876554 5
Q ss_pred CeEEEEeCCCCcEEEE
Q 020798 222 NTLRLWNYSTGKILKT 237 (321)
Q Consensus 222 ~~i~i~d~~~~~~~~~ 237 (321)
..|.+.++..+.....
T Consensus 167 ~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 167 GQLYRYDTASQSEALF 182 (302)
T ss_dssp CCEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCCEEEE
Confidence 6788888776554433
No 347
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.92 E-value=8.3 Score=32.73 Aligned_cols=234 Identities=11% Similarity=0.149 Sum_probs=130.4
Q ss_pred EEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCCc-ce
Q 020798 29 VKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPTA-TC 107 (321)
Q Consensus 29 ~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~ 107 (321)
.-.+|..+.+|.=. ...+.+++++... .+..+.-. ..|.--.|-.+ +.|+.. .+..|+-|++... .+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~--------klks~~~~-e~VvfWkWis~-~~l~lV-T~taVyHWsi~~~s~P 138 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKS--------KMKAHTMT-DDVTFWKWISL-NTVALV-TDNAVYHWSMEGESQP 138 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTE--------EEEEEECS-SCCCEEEEEET-TEEEEE-CSSEEEEEESSSSCCC
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhh--------hhcceecC-CCceEEEecCC-CeEEEE-cCCeeEEecccCCCCc
Confidence 34577777777654 6788888875421 11111111 23333344333 334433 3467999999653 34
Q ss_pred eeeeecCc----ccEEEEEECCCCCEEEEee-------CCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccC---CCEEE
Q 020798 108 LKTLIGHT----NYVFCVNFNPQSNMIVSGA-------FDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRD---GTMIV 173 (321)
Q Consensus 108 ~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~ 173 (321)
.+-+..|. ..|..-..+++.++++..+ -.|.+.+|..+.+. -+.+.+|......+....+ ...++
T Consensus 139 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~ 217 (494)
T 1bpo_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFC 217 (494)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEE
T ss_pred hhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEE
Confidence 45454443 3466666788888876433 24678888876543 4455666544333333211 12444
Q ss_pred EEeC---CCeEEEEeCCCC---c-----eeeee-ccC--CCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 020798 174 TSSY---DGLCRIWDASTG---H-----CMKTL-IDD--ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYT 239 (321)
Q Consensus 174 ~~~~---dg~i~~~d~~~~---~-----~~~~~-~~~--~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~ 239 (321)
.+.. .+.+++.++... . ....+ ... ...-.-.+..++.-..+..-+.-|.|++||+.++..+..-.
T Consensus 218 fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp EEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 4443 378888887432 1 01111 111 11123457788877788888999999999999999887765
Q ss_pred ccCCceeEEEeEEEecCCeEEEEeCCCCeEEEEEcccce
Q 020798 240 GHTNSKYCISSTFSVTNGKYIVSGSEDSCVYLWELQSRK 278 (321)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (321)
-...++.. .+.....+. +++-...|.|.-..+....
T Consensus 298 Is~~~iF~--t~~~~~~~G-i~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 298 ISGETIFV--TAPHEATAG-IIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp CCSSCEEE--EEEETTTTE-EEEEETTCEEEEEEECTTT
T ss_pred ccCCceEE--ecccCCCCc-EEEEccCceEEEEEEcccc
Confidence 44444322 222223343 4444577777666655443
No 348
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.92 E-value=15 Score=35.64 Aligned_cols=223 Identities=10% Similarity=0.111 Sum_probs=118.2
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcceee-eeecCcccEEEEEECCC------CCEEEEeeC-CCcEEEEecCC
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLK-TLIGHTNYVFCVNFNPQ------SNMIVSGAF-DETVRIWDVKT 146 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~------~~~l~~~~~-dg~i~~wd~~~ 146 (321)
.|...+.+. ++++.++ ++.+.++.+..++... .-..-...|.|+++.|. +.+++.|.+ |++++++++.+
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 455555443 4565554 5778888776543211 11123457999998763 368888886 99999999987
Q ss_pred CEEEEEEeCC-CCCeeEEEEcc--CCCEEEEEeCCCeEEEE--eCCCCceee--eeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 147 GKCLKVLPAH-SDPVTAVDFNR--DGTMIVTSSYDGLCRIW--DASTGHCMK--TLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 147 ~~~~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~dg~i~~~--d~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
-+.+...... .....++.+.. ...+|..|-.||.+.-+ |..++.... ....+ ..++.-..+...|..-+.+.
T Consensus 592 l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~ 670 (1158)
T 3ei3_A 592 FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFAC 670 (1158)
T ss_dssp CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEE
T ss_pred CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEE
Confidence 6655443322 12344444432 23467788899987544 444444321 12222 23444444544444433444
Q ss_pred cCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecC-CeEEEEeCCCCeEEEEEcccce--EEEEecCCCCCeEEEEec
Q 020798 220 LDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTN-GKYIVSGSEDSCVYLWELQSRK--VVQKLEGHTDPVISVASH 296 (321)
Q Consensus 220 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~ 296 (321)
.+....+|.-+ ++....... ......+ +.|.... ..-++..+ ++.++|..+...+ .+.++. ....++.++++
T Consensus 671 s~rp~liy~~~-~~l~~s~l~-~~~v~~~-~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~ 745 (1158)
T 3ei3_A 671 SDRPTVIYSSN-HKLVFSNVN-LKEVNYM-CPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQ 745 (1158)
T ss_dssp SSSCEEEEESS-SSEEEEEBS-SSCCCEE-EEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEE
T ss_pred CCCCEEEEEcC-CceEEeccC-hHHhceE-eccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEc
Confidence 45555555433 333222111 1111122 2232221 12233333 4559998875432 223333 23578999999
Q ss_pred CCCceEEEEe
Q 020798 297 PTENIIASGA 306 (321)
Q Consensus 297 p~~~~l~s~~ 306 (321)
|..+.++.+.
T Consensus 746 ~~~~~~~v~~ 755 (1158)
T 3ei3_A 746 EVSQCFGVLS 755 (1158)
T ss_dssp GGGTEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9988776654
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.56 E-value=1.9 Score=37.67 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=63.2
Q ss_pred EEEEECCCCCEEEEe-cCCceEEEeeccccCCCCC----CCCCcc-cccccccccEEEEEECCCCCEEEEEeCCCcEEEE
Q 020798 27 SSVKFSHDGRLLASS-SADKTLLTYSLSSISNSDS----TPPSPL-QKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLW 100 (321)
Q Consensus 27 ~~~~~s~~g~~l~~~-~~d~~v~~~~~~~~~~~~~----~~~~~~-~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iw 100 (321)
..+..+|||++++.+ --+.++.+++...+..... .+...+ .... -.-+....+|.++|.-..+--.|.+|.-|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 356889999987664 5577899999875422100 000000 1111 12456778999999544455689999999
Q ss_pred ecCCc----------ceeeeeecCcccEEEEE-----ECCCCCEEEEee
Q 020798 101 DVPTA----------TCLKTLIGHTNYVFCVN-----FNPQSNMIVSGA 134 (321)
Q Consensus 101 d~~~~----------~~~~~~~~~~~~v~~~~-----~~~~~~~l~~~~ 134 (321)
++... ..+..+.-|-..-...+ -.|+|++|++..
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 98653 23334443433322221 257888888864
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.28 E-value=11 Score=32.15 Aligned_cols=104 Identities=12% Similarity=0.143 Sum_probs=59.0
Q ss_pred cEEEEEECCCCC-EEEEEeCCCcEEEEecCCcc---eeeee---ec------CcccEEEEEECCC----CCEEEEeeC--
Q 020798 75 GVSDLVFSSDSR-FLVSASDDKTIRLWDVPTAT---CLKTL---IG------HTNYVFCVNFNPQ----SNMIVSGAF-- 135 (321)
Q Consensus 75 ~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~---~~~~~---~~------~~~~v~~~~~~~~----~~~l~~~~~-- 135 (321)
....|+|.|+|. .|+++...|.|++++..... .+..+ .. .......++++|+ +.++++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 356899999986 45556788999999754321 11111 11 1345788999996 333333221
Q ss_pred C----------CcEEEEecCC----------CEEEEEEe--CCCCCeeEEEEccCCCEEEEEeCC
Q 020798 136 D----------ETVRIWDVKT----------GKCLKVLP--AHSDPVTAVDFNRDGTMIVTSSYD 178 (321)
Q Consensus 136 d----------g~i~~wd~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d 178 (321)
+ ..|.-|.+.. .+.+..+. ........++|.|||.++++.+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455432 12333332 122345789999999877776544
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.15 E-value=8.3 Score=36.48 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=27.1
Q ss_pred EEEecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 251 TFSVTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
....++..++++-+.|+++|+|++.+++++...
T Consensus 241 ~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 241 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 334456778999999999999999999887654
No 352
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=86.49 E-value=11 Score=30.14 Aligned_cols=195 Identities=12% Similarity=0.095 Sum_probs=97.4
Q ss_pred CCCCEEEEecCCceEEEeeccccCCCCCCC-CCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe---cCCc---
Q 020798 33 HDGRLLASSSADKTLLTYSLSSISNSDSTP-PSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD---VPTA--- 105 (321)
Q Consensus 33 ~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd---~~~~--- 105 (321)
|+..++++.+.+|.++--.+..+....... ......+..+ +.+..+........|+..+..|.+.-+. ++..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 456678888999999877665433211110 0000112222 3343444444455666677788765544 3222
Q ss_pred ---ceeeee--ecCcccEEEEEE-C--CCCCEEEEeeCCCcEEEEecCC-------CEEEEEEeCCCCCeeEEEEccCCC
Q 020798 106 ---TCLKTL--IGHTNYVFCVNF-N--PQSNMIVSGAFDETVRIWDVKT-------GKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 106 ---~~~~~~--~~~~~~v~~~~~-~--~~~~~l~~~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
..+..+ ....+.|..+.. . .++.+++..+..|.++.-.+.. +.....+..+ +.+..+.......
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 111111 112344554433 2 3456788889999999887631 2222223333 4555554444455
Q ss_pred EEEEEeCCCeEEEEeCCCCce-------eeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeC
Q 020798 171 MIVTSSYDGLCRIWDASTGHC-------MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNY 229 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~ 229 (321)
.++..+.+|.+.-+....-.. +.-+....+..+..+...+++..+++.+..|..+-.++
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 677788888877776532111 11111122233444444445567888888888887765
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=85.31 E-value=17 Score=31.11 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=58.3
Q ss_pred ccEEEEEECCCCC-EEEEecCCceEEEeeccccCCCCCCCCCcccccc----cccccEEEEEECCC----CCEEEEEeC-
Q 020798 24 RAISSVKFSHDGR-LLASSSADKTLLTYSLSSISNSDSTPPSPLQKFT----GHEQGVSDLVFSSD----SRFLVSASD- 93 (321)
Q Consensus 24 ~~v~~~~~s~~g~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~----~h~~~i~~~~~~~~----~~~l~~~~~- 93 (321)
..-..|+|.|+|+ .|+++...|.|++++.............+..... ....+...|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4556899999996 4555667888888854321100000000000111 12467889999996 443333221
Q ss_pred -C----------CcEEEEecCCc----------ceeeeee----cCcccEEEEEECCCCCEEEEeeC
Q 020798 94 -D----------KTIRLWDVPTA----------TCLKTLI----GHTNYVFCVNFNPQSNMIVSGAF 135 (321)
Q Consensus 94 -d----------~~i~iwd~~~~----------~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~ 135 (321)
+ ..|.-|.+... +.+..+. .|. ...|+|.|||.++++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeCC
Confidence 1 13444555321 1222221 243 568999999987776554
No 354
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=82.19 E-value=20 Score=29.58 Aligned_cols=153 Identities=11% Similarity=0.084 Sum_probs=82.6
Q ss_pred CCCCCEEEEecCCceEEEeeccccCCCCCCC-CCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe---cCCc--
Q 020798 32 SHDGRLLASSSADKTLLTYSLSSISNSDSTP-PSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD---VPTA-- 105 (321)
Q Consensus 32 s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd---~~~~-- 105 (321)
-|+..++++.+.+|.|+--.+..+....... ...-..+. ..+.+..+........|+..+..|.+.-+. ++..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 3677889999999999976655433211110 01111122 234555555555556677677788765554 3321
Q ss_pred ----ceeeee--ecCcccEEEEE-EC--CCCCEEEEeeCCCcEEEEecCC-------CEEEEEEeCCCCCeeEEEEccCC
Q 020798 106 ----TCLKTL--IGHTNYVFCVN-FN--PQSNMIVSGAFDETVRIWDVKT-------GKCLKVLPAHSDPVTAVDFNRDG 169 (321)
Q Consensus 106 ----~~~~~~--~~~~~~v~~~~-~~--~~~~~l~~~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~~~ 169 (321)
..+..+ ......|..+. +. .++.+|+.++..|.++.-.+.. +.....+.. .+.+-.+......
T Consensus 83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD 161 (370)
T ss_dssp TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC
T ss_pred ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC
Confidence 111111 11234454443 32 2356888899999999887532 222222322 3444444444445
Q ss_pred CEEEEEeCCCeEEEEeC
Q 020798 170 TMIVTSSYDGLCRIWDA 186 (321)
Q Consensus 170 ~~l~~~~~dg~i~~~d~ 186 (321)
..++..+..|.+.-+..
T Consensus 162 ~~i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGE 178 (370)
T ss_dssp CEEEEEETTSEEEEEEG
T ss_pred ceEEEEeCCCeEEEEEc
Confidence 56777788887766654
No 355
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=76.63 E-value=25 Score=27.56 Aligned_cols=142 Identities=13% Similarity=0.092 Sum_probs=66.5
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEe
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLP 154 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 154 (321)
.|..++..... .++. . ||.|..|-....-.+..-......|..++..... .++. . ||.++.|-.......-.-.
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 46666665432 2333 4 8999999654321111000112235555554332 2233 4 7888888654321110000
Q ss_pred CCCCCeeEEEEccCCCEEEEEeCCCeEEEEeCCC-CceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCC
Q 020798 155 AHSDPVTAVDFNRDGTMIVTSSYDGLCRIWDAST-GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYS 230 (321)
Q Consensus 155 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~ 230 (321)
.-...|..++.-.. +.+.-. +|.++.|-... ++.-.. ......+..++.-. ...+.-. |+.+..|-..
T Consensus 99 ~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~--~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n 167 (282)
T 3qhy_B 99 EARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVP--AEAQSGVTALDGGV--YTALAVK-NGGVIAWGDN 167 (282)
T ss_dssp GGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCC--GGGGSSEEEEEECS--SEEEEEE-TTEEEEEECC
T ss_pred ccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCC--ccCCCCeEEEEccc--CEEEEEE-CCEEEEecCC
Confidence 01235666665543 333334 89999996543 221111 01123354444332 2333333 7888888654
No 356
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=76.30 E-value=29 Score=28.03 Aligned_cols=159 Identities=8% Similarity=0.060 Sum_probs=87.5
Q ss_pred EEEEEECC--CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC
Q 020798 26 ISSVKFSH--DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP 103 (321)
Q Consensus 26 v~~~~~s~--~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 103 (321)
+..+...+ +..+++..+.+|.++--.+..+..... .......+... +.+..+........|+..+..|.+..+...
T Consensus 98 ~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~~rf~~~ 175 (327)
T 3uc1_A 98 AQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-GGIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQSIRFSAT 175 (327)
T ss_dssp EEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-SCEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEECC
T ss_pred EEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-CceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeEEEEECc
Confidence 33344443 578899999999999988876553321 11112223333 344444444455677778889988877765
Q ss_pred --Cccee-------eee-ecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCC-------EEEEEE--eCCCCCeeEEE
Q 020798 104 --TATCL-------KTL-IGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTG-------KCLKVL--PAHSDPVTAVD 164 (321)
Q Consensus 104 --~~~~~-------~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-------~~~~~~--~~~~~~v~~~~ 164 (321)
.-... ..+ ....+.|..+...+++..++..+..|.++.-.+..- +-+..+ ....+.+-.+.
T Consensus 176 ~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~ 255 (327)
T 3uc1_A 176 DEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGAL 255 (327)
T ss_dssp TTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEE
T ss_pred ccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEE
Confidence 22111 111 112445666666666678888889999888765321 111112 12123344443
Q ss_pred EccCCCEEEEEeCCCeEEEEeC
Q 020798 165 FNRDGTMIVTSSYDGLCRIWDA 186 (321)
Q Consensus 165 ~~~~~~~l~~~~~dg~i~~~d~ 186 (321)
...+...++..+.+|.+.-++.
T Consensus 256 ~~~~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 256 IVDDDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp EECTTCEEEEEEGGGCEEEEEG
T ss_pred EeCCCccEEEEcCCCeEEEEeh
Confidence 3333445555666666555554
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.57 E-value=47 Score=31.44 Aligned_cols=37 Identities=24% Similarity=0.368 Sum_probs=30.9
Q ss_pred CeeEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee
Q 020798 159 PVTAVDFNRDGTMIVTSSYDGLCRIWDASTGHCMKTL 195 (321)
Q Consensus 159 ~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 195 (321)
.+.+++..++..++++-+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3566777778889999999999999999999877654
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.29 E-value=18 Score=32.04 Aligned_cols=58 Identities=22% Similarity=0.382 Sum_probs=39.9
Q ss_pred eEEEEccCCCEEEEEeCC------------CeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEE
Q 020798 161 TAVDFNRDGTMIVTSSYD------------GLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVG 218 (321)
Q Consensus 161 ~~~~~~~~~~~l~~~~~d------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 218 (321)
=-|+|+|.|++++.-..+ ..+.+.+..+++..+-+.......++.+.|+||++.|++.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 358899999866654322 2355556666665555555556778999999999988765
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=71.54 E-value=8.5 Score=37.27 Aligned_cols=30 Identities=17% Similarity=0.205 Sum_probs=25.7
Q ss_pred ecCCeEEEEeCCCCeEEEEEcccceEEEEe
Q 020798 254 VTNGKYIVSGSEDSCVYLWELQSRKVVQKL 283 (321)
Q Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (321)
.++..++++-+.|+++|+|++.+++++...
T Consensus 246 ~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 246 LSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp ETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred cCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 356778999999999999999999887664
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=68.58 E-value=30 Score=30.44 Aligned_cols=60 Identities=20% Similarity=0.342 Sum_probs=39.9
Q ss_pred eeEEEEccCCCEEEEEeC------------CCeEEEEeCCCCceeeeeccCCCCCeEEEEEccCCCEEEEEe
Q 020798 160 VTAVDFNRDGTMIVTSSY------------DGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGT 219 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 219 (321)
.-.+.|.++|.+.+.... ...+..++..+++....+.......++.++|+||++.|+++-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 457899999987764322 125666677667654433323345678999999999988764
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=66.29 E-value=45 Score=26.08 Aligned_cols=158 Identities=11% Similarity=0.081 Sum_probs=85.9
Q ss_pred ccEEEEEECC-CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEec
Q 020798 24 RAISSVKFSH-DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 24 ~~v~~~~~s~-~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 102 (321)
..|..+-... +..+++..+.+|.++...+..+. ... .......+.. .+.+..+....+...++..+..|.+..+..
T Consensus 68 e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~-~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 68 EKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YKA-QGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp CCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TCS-TTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hhc-CCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 3454443321 56789999999999998877654 111 1111122332 345555555556667888889999888765
Q ss_pred CCcce-------ee--eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC-------CEEEEEEeCCCCCeeEEEEc
Q 020798 103 PTATC-------LK--TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT-------GKCLKVLPAHSDPVTAVDFN 166 (321)
Q Consensus 103 ~~~~~-------~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~ 166 (321)
..-.. .. .+. ..+.+..+...+++..++..+..|.++...+.. ++-+..+ ...+.+..+...
T Consensus 145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~ 222 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI 222 (276)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE
T ss_pred hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe
Confidence 32111 11 111 234455554445566788888889988887532 1112222 223344433332
Q ss_pred cCCCEEEEEeCCCeEEE--EeC
Q 020798 167 RDGTMIVTSSYDGLCRI--WDA 186 (321)
Q Consensus 167 ~~~~~l~~~~~dg~i~~--~d~ 186 (321)
.+...++..+.+|.+.. ++.
T Consensus 223 ~~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 223 KEEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp SSEEEEEEEETTSCEEEEEEEG
T ss_pred CCCCEEEEEcCCCeEEEeeeCH
Confidence 33335555666666555 554
No 362
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=66.18 E-value=46 Score=26.08 Aligned_cols=244 Identities=14% Similarity=0.079 Sum_probs=109.0
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecCC
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVPT 104 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 104 (321)
.|..++.... ..++. . |+.+..|-....-.. ..|.. ....|..++..... .++. . ||.|..|-...
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gql----g~p~~----~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~ 90 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQL----TMPAA----TQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNE 90 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTT----SCCGG----GGSCCCEEEECSSE-EEEE-E-TTEEEEEECCT
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCC----CCCcc----CCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCC
Confidence 4556665433 22333 4 888888864432111 11111 12356666665443 2333 4 89999886543
Q ss_pred cceeeeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCCCEEEEEEeCCCCCeeEEEEccCCCEEEEEeCCCeEEEE
Q 020798 105 ATCLKTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGTMIVTSSYDGLCRIW 184 (321)
Q Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 184 (321)
.-.+..-..-...|..++.... ..+.-. +|.|+.|-......+-........|..++.-..... .-. +|.+..|
T Consensus 91 ~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~--~l~-~G~v~~w 164 (282)
T 3qhy_B 91 DGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTAL--AVK-NGGVIAW 164 (282)
T ss_dssp TSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEE--EEE-TTEEEEE
T ss_pred CCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEE--EEE-CCEEEEe
Confidence 2111100001234555655443 222234 888999865432111100111234666665433322 223 7889988
Q ss_pred eCCC-CceeeeeccCCCCCeEEEEEccCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCceeEEEeEEEecCCeEEEEe
Q 020798 185 DAST-GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYSTGKILKTYTGHTNSKYCISSTFSVTNGKYIVSG 263 (321)
Q Consensus 185 d~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (321)
-... ++.-.. ......+..++.-.. ..++- .|+.+..|-......+.........+..+. .- ....++.
T Consensus 165 G~n~~gqlg~p--~~~~~~v~~i~~G~~--hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~---~G-~~h~~al- 234 (282)
T 3qhy_B 165 GDNYFGQTTVP--AEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIA---SG-EWYSLAL- 234 (282)
T ss_dssp ECCTTSTTSCC--GGGGSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEE---EC-SSCEEEE-
T ss_pred cCCCCCCCCCc--eecCCCeEEEEecCC--EEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEE---cC-CCEEEEE-
Confidence 6543 221100 011233555544332 33333 589999996543211110000011122222 11 2223333
Q ss_pred CCCCeEEEEEcccceEEEEecCCCCCeEEEEecCCCceEE
Q 020798 264 SEDSCVYLWELQSRKVVQKLEGHTDPVISVASHPTENIIA 303 (321)
Q Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 303 (321)
. ||.|..|=.....++. -...|.+++..+.....+
T Consensus 235 ~-~g~v~~wG~n~~gq~~----v~~~v~~iaaG~~h~~al 269 (282)
T 3qhy_B 235 K-NGKVIAWGSSRTAPSS----VQSGVSSIEAGPNAAYAL 269 (282)
T ss_dssp E-TTEEEEESTTCCCCGG----GSSCEEEEEECSSCEEEE
T ss_pred E-CCEEEEecCCCCcccc----CCCCcEEEEECcCeEEEE
Confidence 3 8888888654432221 133577777665544433
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=65.84 E-value=21 Score=32.34 Aligned_cols=29 Identities=17% Similarity=0.563 Sum_probs=24.9
Q ss_pred CCeEEEEeCCCCeEEEEEcccceEEEEec
Q 020798 256 NGKYIVSGSEDSCVYLWELQSRKVVQKLE 284 (321)
Q Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 284 (321)
+..++++-+.|.++|+|++.+++++....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 46789999999999999999998876544
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=64.94 E-value=59 Score=26.92 Aligned_cols=165 Identities=9% Similarity=0.074 Sum_probs=89.2
Q ss_pred cEEEEecCCC--EEEEEEeCC------CCCeeEEEEc---cC----CCEEE-EEeCCCeEEEEeCCCCceeeeec---cC
Q 020798 138 TVRIWDVKTG--KCLKVLPAH------SDPVTAVDFN---RD----GTMIV-TSSYDGLCRIWDASTGHCMKTLI---DD 198 (321)
Q Consensus 138 ~i~~wd~~~~--~~~~~~~~~------~~~v~~~~~~---~~----~~~l~-~~~~dg~i~~~d~~~~~~~~~~~---~~ 198 (321)
.|.+||++++ +.++.+... ......+++. |. +.++. +-...+.|.++|+.+++.-+..- ..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5667888888 777666432 2345666666 22 23433 33456789999998876543321 01
Q ss_pred C--------------CCCeEEEEEccC----CCEEEEEecCCeEEEEeCC-----CCc---EEEEEeccCCc-eeEEEeE
Q 020798 199 E--------------NPPVSFVKFSPN----GKFILVGTLDNTLRLWNYS-----TGK---ILKTYTGHTNS-KYCISST 251 (321)
Q Consensus 199 ~--------------~~~~~~~~~~~~----g~~l~~~~~d~~i~i~d~~-----~~~---~~~~~~~~~~~-~~~~~~~ 251 (321)
. ...+..++++|+ ++.|.-....+ -++|.+. +.. .++.+ +..++ ..+....
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 1 124667888887 66666554433 2333322 211 11211 11211 1122222
Q ss_pred EEecCCeEEEEeCCCCeEEEEEccc-c------eEEEEecCCCCCeEEEEecCCCceEEEE
Q 020798 252 FSVTNGKYIVSGSEDSCVYLWELQS-R------KVVQKLEGHTDPVISVASHPTENIIASG 305 (321)
Q Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~-~------~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 305 (321)
....+|.++++--....|..|+..+ . +.+.. ..--....++.+.++|.+.+..
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~-d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT-SSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEE-CTTCCSEEEEEECTTSCEEEEE
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEE-CCCccccCeEEECCCCeEEEEE
Confidence 2124677778778888999999875 1 12221 1123456788887787766654
No 365
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=62.88 E-value=63 Score=26.54 Aligned_cols=103 Identities=10% Similarity=-0.001 Sum_probs=51.0
Q ss_pred cEEEEEECCC--CCEEEEEeCCCcEEEEecCCcceeeeee-------------------cCcccEEEEEECCC-CCEEEE
Q 020798 75 GVSDLVFSSD--SRFLVSASDDKTIRLWDVPTATCLKTLI-------------------GHTNYVFCVNFNPQ-SNMIVS 132 (321)
Q Consensus 75 ~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------------------~~~~~v~~~~~~~~-~~~l~~ 132 (321)
.|.++++.|. ...+.+++..+-|...+- .++....+. .....+.++.++|. .+.++.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 5778999862 455666655555544432 222212111 01235778889874 344544
Q ss_pred eeCCCcEEEEecCCCEEEEEEeC-----C--------CCCeeEEEEccC-CCEEEEEeCCC
Q 020798 133 GAFDETVRIWDVKTGKCLKVLPA-----H--------SDPVTAVDFNRD-GTMIVTSSYDG 179 (321)
Q Consensus 133 ~~~dg~i~~wd~~~~~~~~~~~~-----~--------~~~v~~~~~~~~-~~~l~~~~~dg 179 (321)
+..++.|...+ ..++.-..+.. + ...+..+.+.|. ...+..+...+
T Consensus 195 g~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 195 GMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred EECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 54444444332 12221111110 0 124788899886 35666666555
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.40 E-value=7.7 Score=37.55 Aligned_cols=37 Identities=27% Similarity=0.482 Sum_probs=30.1
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeee
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL 111 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 111 (321)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455566678889999999999999999999887653
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.43 E-value=86 Score=27.69 Aligned_cols=61 Identities=16% Similarity=0.283 Sum_probs=40.8
Q ss_pred ccEEEEEECCCCCEEEEEeC------------CCcEEEEecCCcceeeeeecC-cccEEEEEECCCCCEEEEee
Q 020798 74 QGVSDLVFSSDSRFLVSASD------------DKTIRLWDVPTATCLKTLIGH-TNYVFCVNFNPQSNMIVSGA 134 (321)
Q Consensus 74 ~~i~~~~~~~~~~~l~~~~~------------d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 134 (321)
.....|.|.++|.+.+.... ...+..++..+++....+.+. ...++.++|+||++.|+.+-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999987763321 124666676667654434332 35689999999998887653
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.07 E-value=20 Score=32.50 Aligned_cols=35 Identities=20% Similarity=0.533 Sum_probs=28.0
Q ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEecCCcceeeee
Q 020798 75 GVSDLVFSSDSRFLVSASDDKTIRLWDVPTATCLKTL 111 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 111 (321)
.|.++.+ +..++++-+.|.++|+|++.+++++...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 4565555 3679999999999999999999876654
No 369
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=56.20 E-value=77 Score=25.46 Aligned_cols=192 Identities=12% Similarity=0.097 Sum_probs=101.5
Q ss_pred CCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEe---cCCc----
Q 020798 33 HDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWD---VPTA---- 105 (321)
Q Consensus 33 ~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd---~~~~---- 105 (321)
|+..++++.+.+|.|+--.+..+...... -..+... +.+..+........|+..+..|.+.-+. ++..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~----~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a 77 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQ----DFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKD 77 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTC----CCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCcc----ccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCC
Confidence 56778888999999987765543221100 1112222 3344444444555677777888765554 3221
Q ss_pred --ceeeee--ecCcccEEEE-EECC--CCCEEEEeeCCCcEEEEecCC--------CEEEEEEeCCCCCeeEEEEccCCC
Q 020798 106 --TCLKTL--IGHTNYVFCV-NFNP--QSNMIVSGAFDETVRIWDVKT--------GKCLKVLPAHSDPVTAVDFNRDGT 170 (321)
Q Consensus 106 --~~~~~~--~~~~~~v~~~-~~~~--~~~~l~~~~~dg~i~~wd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~ 170 (321)
.++..+ ....+.|..+ ...+ ++.+++.++..|.++.-.+.. +.....+.. .+.+..+.......
T Consensus 78 ~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~ 156 (323)
T 1wp5_A 78 LGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMN 156 (323)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCS
T ss_pred CCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCC
Confidence 111111 1123344443 3432 256788889999999887631 222112332 24555555444555
Q ss_pred EEEEEeCCCeEEEEeCCCCc-------eeeeeccCCCCCeEEEEEccCCC-EEEEEecCCeEEEEeCC
Q 020798 171 MIVTSSYDGLCRIWDASTGH-------CMKTLIDDENPPVSFVKFSPNGK-FILVGTLDNTLRLWNYS 230 (321)
Q Consensus 171 ~l~~~~~dg~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~d~~i~i~d~~ 230 (321)
.++..+.+|.+..+....-. -++-+....+..+..+..-+++. .+++.+..|..+..++.
T Consensus 157 ~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 67788888887777653211 11111112223344443333344 67788888887777653
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=55.22 E-value=74 Score=28.18 Aligned_cols=59 Identities=19% Similarity=0.307 Sum_probs=38.6
Q ss_pred cEEEEEECCCCCEEEEEeCC------------CcEEEEecCCcceeeeeecC-cccEEEEEECCCCCEEEEe
Q 020798 75 GVSDLVFSSDSRFLVSASDD------------KTIRLWDVPTATCLKTLIGH-TNYVFCVNFNPQSNMIVSG 133 (321)
Q Consensus 75 ~i~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 133 (321)
..-.|+|++.|++++.-..+ ..+.+.+..+++...-+.++ ..+++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45679999999966644221 23455566666654444443 4678899999998877664
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=53.35 E-value=79 Score=24.69 Aligned_cols=154 Identities=11% Similarity=0.031 Sum_probs=85.1
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECC--CCCEEEEEeCCCcEEEEec
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSS--DSRFLVSASDDKTIRLWDV 102 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~--~~~~l~~~~~d~~i~iwd~ 102 (321)
.+..+.-.....+|+.-++.|.++.-...+..... .. . + +. ....|..+.. + +..+++..+.+|.++...+
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~-~~-~-l--l~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l 97 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGS-KV-S-L--KS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPL 97 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSE-EC-C-C--SS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEG
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCc-cc-c-c--CC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEH
Confidence 45444444444556566667776543332221100 00 1 2 32 2445665544 4 4678999999999999876
Q ss_pred CCcc----eee--eeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecCC---------CEEEEEEeCCCCCeeEEEEcc
Q 020798 103 PTAT----CLK--TLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVKT---------GKCLKVLPAHSDPVTAVDFNR 167 (321)
Q Consensus 103 ~~~~----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~~---------~~~~~~~~~~~~~v~~~~~~~ 167 (321)
.... -.. .+. -.+.+..+........++..+..|.+..+.... |.....+. ....+..+...+
T Consensus 98 ~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~ 175 (276)
T 3no0_A 98 AEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWN 175 (276)
T ss_dssp GGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEES
T ss_pred HHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeC
Confidence 5432 011 122 234455555555556777788889888876421 22211222 234565555555
Q ss_pred CCCEEEEEeCCCeEEEEeCC
Q 020798 168 DGTMIVTSSYDGLCRIWDAS 187 (321)
Q Consensus 168 ~~~~l~~~~~dg~i~~~d~~ 187 (321)
++..++..+..|.++...+.
T Consensus 176 ~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 176 GEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp SCSEEEEEETTSCEEEEEGG
T ss_pred CCCEEEEEeCCCcEEEeEHH
Confidence 56678888899988877653
No 372
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=46.80 E-value=1.7e+02 Score=26.63 Aligned_cols=238 Identities=11% Similarity=0.114 Sum_probs=113.0
Q ss_pred cEEEEE-ECCCCCEEEEE-eCC----CcEEEEecCCcceeeeeecCc--c------cEEEEEECCCCCEEEEe-------
Q 020798 75 GVSDLV-FSSDSRFLVSA-SDD----KTIRLWDVPTATCLKTLIGHT--N------YVFCVNFNPQSNMIVSG------- 133 (321)
Q Consensus 75 ~i~~~~-~~~~~~~l~~~-~~d----~~i~iwd~~~~~~~~~~~~~~--~------~v~~~~~~~~~~~l~~~------- 133 (321)
....+. ++|++++++.+ +.. ..++++|+.+++.+..-.... . ....++|..++.++++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 344555 88999887754 222 359999999887653211100 0 01233665333333321
Q ss_pred ---eCCCcEEEEecCCCE--EEEEEeCCCCCe-eEEEEccCCC-----EEEEEe---CCCeEEEEeCCC--Cceeeeecc
Q 020798 134 ---AFDETVRIWDVKTGK--CLKVLPAHSDPV-TAVDFNRDGT-----MIVTSS---YDGLCRIWDAST--GHCMKTLID 197 (321)
Q Consensus 134 ---~~dg~i~~wd~~~~~--~~~~~~~~~~~v-~~~~~~~~~~-----~l~~~~---~dg~i~~~d~~~--~~~~~~~~~ 197 (321)
+....++.|.+-+.. ....+......+ .....+++++ .+++.+ ....+.+.|... ++ ...+..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeec
Confidence 123568888765432 222333333332 2344556655 244433 224566666653 22 222222
Q ss_pred CCCCCeEEEEEccCCCEEEEE----------ecCCeEEEEeCCCCc-------EEEEEeccCCceeEEEeEEEecCCeEE
Q 020798 198 DENPPVSFVKFSPNGKFILVG----------TLDNTLRLWNYSTGK-------ILKTYTGHTNSKYCISSTFSVTNGKYI 260 (321)
Q Consensus 198 ~~~~~~~~~~~~~~g~~l~~~----------~~d~~i~i~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (321)
.... .+....++.+++.. ...+.|...|+.++. ....+-.+.... .+..... ..+.++
T Consensus 289 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~-~~~~l~ 363 (711)
T 4hvt_A 289 PSDA---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANE-VFNFIST-TKDRVF 363 (711)
T ss_dssp CTTC---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTE-EEEEEEE-CSSCEE
T ss_pred CCcc---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCC-eEEEEEE-ECCEEE
Confidence 2221 12334455555432 135678888876531 122211222221 2322222 234666
Q ss_pred EEeCCCCe--EEEEEcccce-EEEE-ecCC-CCCeEEEEecCCCceEEE--EeecCCccEEEccc
Q 020798 261 VSGSEDSC--VYLWELQSRK-VVQK-LEGH-TDPVISVASHPTENIIAS--GALDNDRTVKIWTQ 318 (321)
Q Consensus 261 ~~~~~dg~--i~vwd~~~~~-~~~~-~~~h-~~~v~~~~~~p~~~~l~s--~~~d~~~~i~iw~~ 318 (321)
++...++. |.++++.+++ .... +.-. ...+......+++..++. .+......+..++.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 428 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVK 428 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC
Confidence 66666664 6677766554 1222 2221 245666666677654333 23334456666664
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=42.38 E-value=1.3e+02 Score=24.14 Aligned_cols=160 Identities=9% Similarity=0.120 Sum_probs=84.8
Q ss_pred cEEEEEECCCCCEEEEecCCceEEEeeccccCCCC-CCCCCcc---cccccccccEEEE-EECC--CCCEEEEEeCCCcE
Q 020798 25 AISSVKFSHDGRLLASSSADKTLLTYSLSSISNSD-STPPSPL---QKFTGHEQGVSDL-VFSS--DSRFLVSASDDKTI 97 (321)
Q Consensus 25 ~v~~~~~s~~g~~l~~~~~d~~v~~~~~~~~~~~~-~~~~~~~---~~~~~h~~~i~~~-~~~~--~~~~l~~~~~d~~i 97 (321)
.+..+.-......|+.-+..|.+......+..... .....++ ..+.. ...|..+ .... +..+++..+.+|.+
T Consensus 43 ~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G~i 121 (327)
T 3uc1_A 43 IVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNGLV 121 (327)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTSEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCCEE
Confidence 34444333344455555556665544333322211 1112221 12222 2344444 4442 57789999999999
Q ss_pred EEEecCCccee-------eeeecCcccEEEEEECCCCCEEEEeeCCCcEEEEecC--C---------CEEEEEEeCCCCC
Q 020798 98 RLWDVPTATCL-------KTLIGHTNYVFCVNFNPQSNMIVSGAFDETVRIWDVK--T---------GKCLKVLPAHSDP 159 (321)
Q Consensus 98 ~iwd~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~wd~~--~---------~~~~~~~~~~~~~ 159 (321)
+.-.+...... ..+.. .+.+..+........++..+..|.+..+... . |...-.+. ....
T Consensus 122 Kr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~ 199 (327)
T 3uc1_A 122 KKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDR 199 (327)
T ss_dssp EEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCC
T ss_pred EEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCE
Confidence 99876543211 11222 3334444444445667777888888777665 2 11111122 2345
Q ss_pred eeEEEEccCCCEEEEEeCCCeEEEEeCC
Q 020798 160 VTAVDFNRDGTMIVTSSYDGLCRIWDAS 187 (321)
Q Consensus 160 v~~~~~~~~~~~l~~~~~dg~i~~~d~~ 187 (321)
|.++...+.+..++..+..|.++.-.+.
T Consensus 200 Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 200 LLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 6666666666688899999988877653
No 374
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=31.36 E-value=3e+02 Score=25.01 Aligned_cols=194 Identities=9% Similarity=0.037 Sum_probs=94.6
Q ss_pred EEEE-ECCCCCEEEEe-e----CCCcEEEEecCCCEEEEE-Ee-CCCC------CeeEEEEccCCCEEEEE---------
Q 020798 119 FCVN-FNPQSNMIVSG-A----FDETVRIWDVKTGKCLKV-LP-AHSD------PVTAVDFNRDGTMIVTS--------- 175 (321)
Q Consensus 119 ~~~~-~~~~~~~l~~~-~----~dg~i~~wd~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~--------- 175 (321)
..+. ++|++++++.+ + .-..++++|+.+++.+.. +. .-+. ....++|..+...+++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 3444 78998876543 2 224689999999876531 11 0000 11345887444444432
Q ss_pred -eCCCeEEEEeCCCCcee-eeeccCCCCC-eEEEEEccCCCE-----EEEEec---CCeEEEEeCCC--CcEEEEEeccC
Q 020798 176 -SYDGLCRIWDASTGHCM-KTLIDDENPP-VSFVKFSPNGKF-----ILVGTL---DNTLRLWNYST--GKILKTYTGHT 242 (321)
Q Consensus 176 -~~dg~i~~~d~~~~~~~-~~~~~~~~~~-~~~~~~~~~g~~-----l~~~~~---d~~i~i~d~~~--~~~~~~~~~~~ 242 (321)
+....++.|.+-+.... ..+....... ......++++++ ++..+. ...+.+.|... ++.. .+....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-EeecCC
Confidence 12246888877654321 1122222222 223445666652 333331 23566666543 3322 222211
Q ss_pred CceeEEEeEEEecCCeEEEEe----------CCCCeEEEEEcccce-------EEEE-e-cCCCCCeEEEEecCCCceEE
Q 020798 243 NSKYCISSTFSVTNGKYIVSG----------SEDSCVYLWELQSRK-------VVQK-L-EGHTDPVISVASHPTENIIA 303 (321)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~----------~~dg~i~vwd~~~~~-------~~~~-~-~~h~~~v~~~~~~p~~~~l~ 303 (321)
.. .+ . ...++.+++.. ...+.|.+.++.++. .... + ......+.++.+..+ .+++
T Consensus 291 ~~--~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 291 DA--TL--Q-GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp TC--EE--E-EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEE
T ss_pred cc--eE--e-eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEE
Confidence 11 11 1 11345555532 146778889987642 1122 2 223346778888866 4555
Q ss_pred EEeecCCccEEEcccc
Q 020798 304 SGALDNDRTVKIWTQE 319 (321)
Q Consensus 304 s~~~d~~~~i~iw~~~ 319 (321)
+...+....+.+++.+
T Consensus 365 ~~~~~~~~~l~~~~~~ 380 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLE 380 (711)
T ss_dssp EEEETTEEEEEEECEE
T ss_pred EEEECCEEEEEEEECC
Confidence 5544444457777653
No 375
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=22.61 E-value=3.2e+02 Score=22.39 Aligned_cols=68 Identities=9% Similarity=0.079 Sum_probs=42.1
Q ss_pred CCCEEEEecCCceEEEeeccccCCCCCCCCCcccccccccccEEEEEECCCCCEEEEEeCCCcEEEEecC
Q 020798 34 DGRLLASSSADKTLLTYSLSSISNSDSTPPSPLQKFTGHEQGVSDLVFSSDSRFLVSASDDKTIRLWDVP 103 (321)
Q Consensus 34 ~g~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 103 (321)
++.+|+.++..|.++.-.+..+..... .......+.. .+.+..+........++..+.+|.+..++..
T Consensus 112 ~~~~ll~~T~~G~vKrt~l~e~~~~~~-~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 112 DNRYVFMATRNGTVKKTPLSEFAFRLA-RGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCSCCT-TCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred CCcEEEEEeCCCeEEEeEHHHhhcccC-CceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 456899999999999988877654221 1111223333 3344444444445567778888888878753
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=22.56 E-value=2.8e+02 Score=24.16 Aligned_cols=66 Identities=9% Similarity=0.141 Sum_probs=40.6
Q ss_pred EEEEEECCCC--CEEEEeeCCCcEEEEecCCC----EEEEEEe--CCCCCee-EEEEccCCCEEEEEeCCCeEEE
Q 020798 118 VFCVNFNPQS--NMIVSGAFDETVRIWDVKTG----KCLKVLP--AHSDPVT-AVDFNRDGTMIVTSSYDGLCRI 183 (321)
Q Consensus 118 v~~~~~~~~~--~~l~~~~~dg~i~~wd~~~~----~~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~ 183 (321)
.+.++....+ ..++.|..+|.|+-.-+... .....+. ....+|. .+.+++++..|++++..+.+++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3444444333 34677888888765444322 1222232 2246785 8999999999999988876665
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.36 E-value=3.6e+02 Score=23.19 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=35.9
Q ss_pred EEEEeeCCCcEEEEecC-CCE-------EEEEEeC--CCCCeeEEEEccCCCEEEEEeCCCeEEE
Q 020798 129 MIVSGAFDETVRIWDVK-TGK-------CLKVLPA--HSDPVTAVDFNRDGTMIVTSSYDGLCRI 183 (321)
Q Consensus 129 ~l~~~~~dg~i~~wd~~-~~~-------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 183 (321)
.++.|..+|.|+-.-+. .+. .+..+.. ...+|..+.++++...|++++..+.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46778888887543322 211 1222222 3578999999999999999998887665
Done!