Query 020799
Match_columns 321
No_of_seqs 315 out of 1516
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 08:21:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020799.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020799hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 8.1E-41 2.8E-45 285.0 7.9 109 143-252 2-112 (138)
2 1jer_A Cucumber stellacyanin; 100.0 9.5E-39 3.2E-43 272.2 7.9 108 24-132 2-111 (138)
3 1ws8_A Mavicyanin; oxidized fo 100.0 6.3E-38 2.2E-42 257.4 8.0 106 144-251 2-107 (109)
4 1x9u_A Umecyanin; cupredoxin, 100.0 1.9E-37 6.6E-42 257.1 8.9 106 145-251 2-108 (116)
5 1ws8_A Mavicyanin; oxidized fo 100.0 1E-37 3.5E-42 256.1 6.5 104 25-130 2-105 (109)
6 1x9u_A Umecyanin; cupredoxin, 100.0 2.9E-37 9.8E-42 256.1 7.4 105 26-131 2-107 (116)
7 2cbp_A Cucumber basic protein; 100.0 5.5E-36 1.9E-40 240.6 8.0 96 145-247 1-96 (96)
8 2cbp_A Cucumber basic protein; 100.0 1.5E-35 5.2E-40 238.0 7.2 96 26-128 1-96 (96)
9 1f56_A Plantacyanin; cupredoxi 100.0 1.6E-32 5.4E-37 218.4 9.0 91 145-247 1-91 (91)
10 1f56_A Plantacyanin; cupredoxi 100.0 6.4E-32 2.2E-36 215.0 7.7 90 27-128 2-91 (91)
11 1qhq_A Protein (auracyanin); e 99.2 8.8E-11 3E-15 98.5 8.7 95 143-247 15-139 (140)
12 1qhq_A Protein (auracyanin); e 99.1 6.7E-11 2.3E-15 99.2 7.0 96 23-128 14-139 (140)
13 2cal_A Rusticyanin; iron respi 99.0 3.7E-10 1.3E-14 97.1 6.7 76 171-247 62-154 (154)
14 1bxv_A Plastocyanin; copper pr 99.0 6.7E-10 2.3E-14 85.6 6.6 71 170-247 19-91 (91)
15 1bxv_A Plastocyanin; copper pr 99.0 6.8E-10 2.3E-14 85.5 6.1 85 27-128 4-91 (91)
16 2cal_A Rusticyanin; iron respi 98.9 1.6E-09 5.3E-14 93.2 6.7 76 52-128 62-154 (154)
17 1paz_A Pseudoazurin precursor; 98.7 2.7E-08 9.3E-13 82.4 8.1 81 31-129 11-94 (123)
18 1pmy_A Pseudoazurin; electron 98.7 2.5E-08 8.4E-13 82.7 7.8 83 31-130 11-95 (123)
19 1iuz_A Plastocyanin; electron 98.7 2E-08 6.8E-13 79.0 6.6 76 170-247 18-98 (98)
20 1pmy_A Pseudoazurin; electron 98.7 6.7E-08 2.3E-12 80.1 9.4 73 170-249 21-95 (123)
21 2aan_A Auracyanin A; cupredoxi 98.7 6.6E-08 2.3E-12 80.8 9.3 94 24-128 17-139 (139)
22 1plc_A Plastocyanin; electron 98.7 3.6E-08 1.2E-12 77.3 6.9 76 170-247 17-99 (99)
23 2aan_A Auracyanin A; cupredoxi 98.7 1E-07 3.6E-12 79.6 10.2 77 170-247 35-139 (139)
24 2gim_A Plastocyanin; beta shee 98.7 3.5E-08 1.2E-12 78.1 6.5 90 146-247 5-105 (106)
25 1paz_A Pseudoazurin precursor; 98.7 7.9E-08 2.7E-12 79.6 8.8 71 170-248 21-94 (123)
26 2gim_A Plastocyanin; beta shee 98.7 1E-07 3.5E-12 75.4 9.1 90 27-128 5-105 (106)
27 3erx_A Pseudoazurin; copper pr 98.6 5.6E-08 1.9E-12 80.6 6.9 71 52-129 22-94 (123)
28 1iuz_A Plastocyanin; electron 98.6 3.7E-08 1.3E-12 77.4 5.4 90 27-128 3-98 (98)
29 1plc_A Plastocyanin; electron 98.6 1.2E-07 4E-12 74.4 8.1 89 28-128 3-99 (99)
30 3tu6_A Pseudoazurin (blue copp 98.6 8.8E-08 3E-12 79.9 7.2 84 30-130 11-97 (127)
31 3erx_A Pseudoazurin; copper pr 98.6 1.4E-07 4.7E-12 78.3 8.0 72 170-248 21-94 (123)
32 1kdj_A Plastocyanin; electron 98.6 1.3E-07 4.4E-12 74.4 7.4 76 170-247 17-102 (102)
33 1byp_A Protein (plastocyanin); 98.6 1.1E-07 3.9E-12 74.3 6.6 76 170-247 17-99 (99)
34 2plt_A Plastocyanin; electron 98.5 7.8E-08 2.7E-12 75.0 5.6 76 170-247 18-98 (98)
35 1b3i_A PETE protein, protein ( 98.5 2.3E-07 8E-12 72.3 8.2 74 170-247 19-97 (97)
36 1b3i_A PETE protein, protein ( 98.5 2E-07 6.7E-12 72.7 7.3 88 27-128 4-97 (97)
37 3tu6_A Pseudoazurin (blue copp 98.5 1.7E-07 5.9E-12 78.1 7.3 73 170-249 23-97 (127)
38 3ef4_A Pseudoazurin, blue copp 98.5 2.3E-07 7.8E-12 77.2 8.0 82 31-129 10-95 (124)
39 1byp_A Protein (plastocyanin); 98.5 1.5E-07 5.3E-12 73.6 6.6 89 28-128 3-99 (99)
40 1kdj_A Plastocyanin; electron 98.5 2.3E-07 7.7E-12 73.0 7.2 89 28-128 3-102 (102)
41 2plt_A Plastocyanin; electron 98.5 1.3E-07 4.5E-12 73.7 5.5 90 27-128 3-98 (98)
42 3ef4_A Pseudoazurin, blue copp 98.5 4.5E-07 1.5E-11 75.4 8.9 73 170-249 22-96 (124)
43 1pcs_A Plastocyanin; electron 98.4 4E-07 1.4E-11 71.0 5.4 76 170-247 19-98 (98)
44 1pcs_A Plastocyanin; electron 98.3 1.1E-06 3.7E-11 68.5 7.3 90 27-128 4-98 (98)
45 4hci_A Cupredoxin 1; structura 98.0 4.6E-06 1.6E-10 65.6 3.8 67 170-247 28-100 (100)
46 1cuo_A Protein (azurin ISO-2); 97.9 5.3E-05 1.8E-09 63.1 9.8 92 145-247 3-128 (129)
47 2ux6_A Pseudoazurin; type-1 co 97.9 3.7E-05 1.3E-09 63.3 7.6 69 52-129 22-92 (122)
48 3ay2_A Lipid modified azurin p 97.8 4E-05 1.4E-09 66.7 7.6 92 145-247 43-166 (167)
49 3cvb_A Plastocyanin; cupredoxi 97.8 4.5E-05 1.5E-09 59.6 7.1 74 170-247 19-104 (105)
50 3c75_A Amicyanin; copper prote 97.8 4.9E-05 1.7E-09 63.2 7.7 66 52-128 61-132 (132)
51 3cvb_A Plastocyanin; cupredoxi 97.8 5.6E-05 1.9E-09 59.1 7.4 88 27-128 4-104 (105)
52 3ay2_A Lipid modified azurin p 97.8 5.7E-05 1.9E-09 65.8 7.9 92 26-128 43-166 (167)
53 1cuo_A Protein (azurin ISO-2); 97.8 0.00017 5.8E-09 60.0 10.2 91 27-128 4-128 (129)
54 4hci_A Cupredoxin 1; structura 97.7 1.6E-05 5.3E-10 62.5 2.9 66 52-128 29-100 (100)
55 1id2_A Amicyanin; beta barrel, 97.7 0.0001 3.4E-09 58.7 7.3 67 170-247 34-106 (106)
56 2ux6_A Pseudoazurin; type-1 co 97.7 0.0001 3.6E-09 60.5 7.5 70 170-248 21-92 (122)
57 2ov0_A Amicyanin; beta-sandwic 97.7 9.6E-05 3.3E-09 58.6 6.9 67 170-247 33-105 (105)
58 2ov0_A Amicyanin; beta-sandwic 97.6 0.00013 4.5E-09 57.8 6.3 82 25-128 18-105 (105)
59 1iko_P Ephrin-B2; greek KEY, g 97.5 5.7E-05 2E-09 66.4 4.3 80 55-134 26-145 (178)
60 1nwp_A Azurin; electron transp 97.5 0.00013 4.4E-09 60.7 6.2 92 145-247 3-128 (128)
61 2iaa_C Azurin; quinoprotein, t 97.5 0.00056 1.9E-08 56.8 10.1 91 146-247 3-127 (128)
62 1nwp_A Azurin; electron transp 97.5 0.00013 4.3E-09 60.7 5.8 91 27-128 4-128 (128)
63 3c75_A Amicyanin; copper prote 97.5 0.00022 7.6E-09 59.1 7.3 67 170-247 60-132 (132)
64 2ccw_A Azurin II, AZN-2; elect 97.5 0.00036 1.2E-08 58.0 8.4 92 145-247 3-128 (129)
65 2ccw_A Azurin II, AZN-2; elect 97.5 0.00061 2.1E-08 56.6 9.4 91 27-128 4-128 (129)
66 1id2_A Amicyanin; beta barrel, 97.4 0.00035 1.2E-08 55.5 7.1 66 52-128 35-106 (106)
67 2iaa_C Azurin; quinoprotein, t 97.4 0.00047 1.6E-08 57.2 7.7 90 28-128 4-127 (128)
68 1oe1_A Dissimilatory copper-co 97.3 0.0084 2.9E-07 56.4 16.9 189 53-251 67-321 (336)
69 2dv6_A Nitrite reductase; elec 97.3 0.0017 5.9E-08 63.4 12.0 181 51-249 55-282 (447)
70 1iko_P Ephrin-B2; greek KEY, g 97.3 9E-05 3.1E-09 65.1 2.6 79 173-251 25-143 (178)
71 1mzy_A Copper-containing nitri 97.0 0.016 5.5E-07 54.5 15.0 193 53-251 66-321 (333)
72 2x11_B Ephrin-A5; receptor-sig 96.9 0.0013 4.6E-08 57.5 6.4 74 53-129 52-162 (177)
73 3czu_B Ephrin-A1; ATP-binding, 96.7 0.0039 1.3E-07 54.8 7.5 77 52-131 49-162 (182)
74 1iby_A Nitrosocyanin; RED copp 96.5 0.0042 1.4E-07 49.2 5.7 67 170-247 38-111 (112)
75 3gdc_A Multicopper oxidase; be 96.4 0.021 7.1E-07 52.9 10.9 183 52-248 67-288 (288)
76 1shx_A Ephrin-A5; ephrin signa 96.3 0.0079 2.7E-07 50.7 6.7 74 53-129 23-133 (138)
77 1shx_A Ephrin-A5; ephrin signa 96.2 0.011 3.6E-07 49.9 7.2 76 172-250 23-135 (138)
78 3czu_B Ephrin-A1; ATP-binding, 96.1 0.0089 3E-07 52.5 6.4 78 171-251 49-163 (182)
79 2x11_B Ephrin-A5; receptor-sig 96.1 0.011 3.9E-07 51.6 7.0 77 172-251 52-165 (177)
80 2vsm_B Ephrin-B2; developmenta 96.1 0.0065 2.2E-07 51.3 5.2 75 55-129 25-139 (140)
81 1iby_A Nitrosocyanin; RED copp 96.0 0.0054 1.8E-07 48.6 4.1 66 52-128 39-111 (112)
82 3d12_B Ephrin-B3; beta propell 95.9 0.01 3.5E-07 50.2 5.4 76 172-247 22-140 (141)
83 1kbv_A ANIA, major outer membr 95.9 0.13 4.4E-06 48.3 13.6 187 52-250 71-309 (327)
84 3d12_B Ephrin-B3; beta propell 95.6 0.014 4.7E-07 49.4 5.1 75 54-128 23-140 (141)
85 2vsm_B Ephrin-B2; developmenta 95.4 0.012 4.2E-07 49.6 4.2 76 173-248 24-139 (140)
86 2cua_A Protein (CUA); CUA cent 95.1 0.058 2E-06 44.8 7.2 66 171-247 61-134 (135)
87 2wo3_B Ephrin-A2; transferase- 95.0 0.038 1.3E-06 47.5 6.1 74 53-129 32-143 (157)
88 3fsa_A Azurin; copper, cupredo 95.0 0.24 8.3E-06 40.8 10.8 73 171-247 19-125 (125)
89 2wo3_B Ephrin-A2; transferase- 94.9 0.079 2.7E-06 45.5 7.8 76 172-250 32-145 (157)
90 3fsa_A Azurin; copper, cupredo 94.9 0.33 1.1E-05 40.1 11.2 87 28-128 5-125 (125)
91 2zoo_A Probable nitrite reduct 94.8 0.37 1.3E-05 46.7 13.2 181 52-251 61-300 (442)
92 2cua_A Protein (CUA); CUA cent 94.7 0.061 2.1E-06 44.7 6.5 66 52-128 61-134 (135)
93 3kw8_A Laccase, putative coppe 94.5 0.56 1.9E-05 42.9 13.1 184 53-251 38-268 (276)
94 2bw4_A Copper-containing nitri 94.1 1.2 4.1E-05 41.6 14.9 191 53-251 73-327 (340)
95 2dv6_A Nitrite reductase; elec 93.3 0.12 4E-06 50.3 6.4 78 170-251 55-135 (447)
96 3cg8_A Laccase; oxidoreductase 92.1 2.3 7.7E-05 40.2 13.4 132 105-251 151-309 (343)
97 3hei_B Ephrin-A1; EPH receptor 92.0 0.26 9E-06 41.0 5.9 35 53-87 22-67 (132)
98 3g5w_A Multicopper oxidase typ 91.9 2.4 8.1E-05 39.5 13.2 185 52-250 35-278 (318)
99 1sdd_A Coagulation factor V; c 91.6 0.23 8E-06 46.1 5.8 138 105-249 140-301 (306)
100 1fwx_A Nitrous oxide reductase 91.0 0.26 8.8E-06 50.6 5.9 69 170-249 513-593 (595)
101 3hei_B Ephrin-A1; EPH receptor 90.5 0.33 1.1E-05 40.4 5.0 77 171-247 21-131 (132)
102 3sbq_A Nitrous-oxide reductase 89.8 0.58 2E-05 48.0 7.1 67 170-248 558-637 (638)
103 3tas_A Small laccase, multi-co 89.6 9 0.00031 35.3 14.8 137 103-252 114-275 (313)
104 3t9w_A Small laccase, multi-co 89.1 8.3 0.00028 35.5 14.1 137 103-252 130-291 (299)
105 3sbq_A Nitrous-oxide reductase 87.7 0.5 1.7E-05 48.5 5.0 67 52-129 559-637 (638)
106 2r7e_B Coagulation factor VIII 87.3 0.58 2E-05 49.3 5.4 140 103-247 269-455 (770)
107 3s8f_B Cytochrome C oxidase su 87.3 1.2 4.2E-05 38.3 6.6 68 171-248 94-168 (168)
108 3s8f_B Cytochrome C oxidase su 87.0 1.3 4.5E-05 38.1 6.6 68 51-128 93-167 (168)
109 1fwx_A Nitrous oxide reductase 86.9 0.56 1.9E-05 48.1 4.9 67 52-129 514-592 (595)
110 1sdd_B Coagulation factor V; c 86.8 8.5 0.00029 39.1 13.7 149 97-248 131-327 (647)
111 2zwn_A Two-domain type laccase 86.4 9.6 0.00033 35.5 12.9 185 52-250 36-279 (339)
112 1oe1_A Dissimilatory copper-co 78.9 3.4 0.00012 38.4 6.4 77 171-250 66-154 (336)
113 1mzy_A Copper-containing nitri 78.9 2.8 9.5E-05 39.0 5.8 76 171-249 65-153 (333)
114 2j5w_A Ceruloplasmin, ferroxid 77.1 9.1 0.00031 41.5 10.0 75 52-130 633-718 (1065)
115 2r7e_A Coagulation factor VIII 76.6 14 0.00048 38.5 10.9 141 104-251 154-332 (742)
116 1kbv_A ANIA, major outer membr 72.6 3.6 0.00012 38.3 4.7 75 170-249 70-157 (327)
117 2zoo_A Probable nitrite reduct 68.9 3.4 0.00012 39.9 3.8 76 170-249 60-147 (442)
118 2r7e_A Coagulation factor VIII 65.2 46 0.0016 34.6 11.7 74 52-129 245-329 (742)
119 2bw4_A Copper-containing nitri 65.2 8.4 0.00029 35.7 5.6 76 171-249 72-159 (340)
120 4i1k_A B3 domain-containing tr 43.9 8.3 0.00028 32.1 1.5 26 169-194 112-137 (146)
121 3l6w_A Hemocyanin 1; cupredoxi 41.9 26 0.0009 34.9 4.9 75 52-128 412-491 (491)
122 2zwn_A Two-domain type laccase 40.8 31 0.0011 32.0 5.1 77 170-249 35-127 (339)
123 3iuw_A Activating signal coint 38.9 12 0.00041 28.6 1.5 16 53-68 36-52 (83)
124 1v10_A Laccase; multicopper bl 37.3 44 0.0015 33.0 5.8 33 98-130 117-150 (521)
125 1cyx_A CYOA; electron transpor 35.2 31 0.001 30.5 3.8 65 171-247 42-115 (205)
126 3gdc_A Multicopper oxidase; be 34.3 22 0.00074 32.3 2.8 32 98-129 257-288 (288)
127 1aoz_A Ascorbate oxidase; oxid 32.8 71 0.0024 31.6 6.5 79 52-131 35-125 (552)
128 2q9o_A Laccase-1; multicopper 31.2 58 0.002 32.5 5.6 76 52-130 68-158 (559)
129 2xu9_A Laccase; oxidoreductase 30.9 3.5E+02 0.012 25.6 11.6 75 172-246 350-438 (439)
130 3hb3_B Cytochrome C oxidase su 30.5 40 0.0014 31.4 3.9 67 171-249 190-265 (298)
131 2q9o_A Laccase-1; multicopper 30.4 57 0.002 32.5 5.4 76 171-249 68-158 (559)
132 1cyx_A CYOA; electron transpor 30.4 35 0.0012 30.2 3.3 30 97-128 83-115 (205)
133 1yel_A AT1G16640; CESG, protei 29.9 16 0.00054 28.2 0.9 24 50-75 73-96 (104)
134 2gsm_B Cytochrome C oxidase su 29.7 43 0.0015 30.4 4.0 66 171-248 172-246 (262)
135 1aoz_A Ascorbate oxidase; oxid 29.3 97 0.0033 30.6 6.8 77 171-250 35-125 (552)
136 4i1k_A B3 domain-containing tr 28.8 23 0.00079 29.3 1.8 26 50-75 112-137 (146)
137 3cg8_A Laccase; oxidoreductase 28.6 1E+02 0.0036 28.5 6.6 29 102-130 279-307 (343)
138 1sdd_A Coagulation factor V; c 28.5 9.6 0.00033 35.0 -0.7 33 97-129 268-300 (306)
139 1zpu_A Iron transport multicop 27.9 82 0.0028 31.2 6.0 76 52-130 35-125 (534)
140 1v54_B Cytochrome C oxidase po 27.1 42 0.0014 29.8 3.3 30 217-248 183-215 (227)
141 3sqr_A Laccase; multicopper ox 26.8 90 0.0031 31.5 6.1 76 171-249 99-188 (580)
142 1zpu_A Iron transport multicop 26.6 97 0.0033 30.6 6.3 77 171-250 35-126 (534)
143 1yel_A AT1G16640; CESG, protei 26.6 23 0.00078 27.2 1.3 19 169-187 73-91 (104)
144 3t6v_A Laccase; beta barrel, o 26.3 86 0.0029 30.8 5.7 76 52-130 36-130 (495)
145 3hb3_B Cytochrome C oxidase su 25.7 41 0.0014 31.3 3.1 31 97-129 231-264 (298)
146 3sqr_A Laccase; multicopper ox 25.6 1.1E+02 0.0037 30.9 6.4 34 97-130 155-188 (580)
147 2z0t_A Putative uncharacterize 25.5 25 0.00086 27.9 1.4 11 53-63 32-42 (109)
148 3pxl_A Laccase; 4-copper prote 25.0 93 0.0032 30.6 5.7 76 52-130 35-129 (499)
149 2gsm_B Cytochrome C oxidase su 24.6 46 0.0016 30.3 3.1 31 97-129 213-246 (262)
150 3t6v_A Laccase; beta barrel, o 23.1 1.1E+02 0.0037 30.1 5.8 77 171-250 36-131 (495)
151 1v54_B Cytochrome C oxidase po 23.0 45 0.0015 29.7 2.7 30 98-129 183-215 (227)
152 3pxl_A Laccase; 4-copper prote 22.6 1.2E+02 0.004 29.9 5.9 34 217-250 96-130 (499)
153 1xne_A Hypothetical protein PF 22.5 21 0.00072 28.6 0.4 12 53-64 33-44 (113)
154 2uxt_A Protein SUFI, SUFI; oxi 21.8 75 0.0026 30.7 4.3 70 53-130 52-139 (451)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=8.1e-41 Score=284.98 Aligned_cols=109 Identities=32% Similarity=0.563 Sum_probs=101.7
Q ss_pred CceeeeecCccccccCCCCCcccccccccceeEeCCEEEEeecCCCCcEEEe-CccccccccCCCCcccccCCCeEEEe-
Q 020799 143 TPVNYTVGGNIGWAIPPGGALFYASWASFYSFFVCDTLVFNFANGTQDVAIV-PKDVYETCNINSTIAVFTSSPVKITL- 220 (321)
Q Consensus 143 sa~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~h~V~~V-~~~~y~~C~~~~p~~~~~~G~~~v~L- 220 (321)
++++|+|||+.||+++++ ..+|++||++++|+|||+|+|+|.+++|+|+|| ++++|+.|+.++++..+++|+++|+|
T Consensus 2 ~a~~~~VGg~~GW~~~~~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~ 80 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSS-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERL 80 (138)
T ss_dssp CCCEEETTGGGCSSCCSS-TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEEC
T ss_pred CceEEEECCcCcCcCCCC-ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEec
Confidence 467899999999999754 468999999999999999999999999999999 99999999999999999999999999
Q ss_pred ecCeeEEEEcCCCCCCCCCCeEEEEEeCCCCC
Q 020799 221 KFPGEYYFTSTYLSHCSLGQRLAINVTGTSTP 252 (321)
Q Consensus 221 ~~~G~~yFic~~~~HC~~GmKl~I~V~~~~~~ 252 (321)
+++|++||||++++||++||||+|+|.+...+
T Consensus 81 ~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~ 112 (138)
T 1jer_A 81 DELGMHYFVCTVGTHCSNGQKLSINVVAANAT 112 (138)
T ss_dssp CSSEEEEEECCSTTTGGGTCEEEEEEECCC--
T ss_pred cCCcCEEEEcCCCCccccCCEEEEEEcCCCCC
Confidence 99999999999999999999999999987654
No 2
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=9.5e-39 Score=272.24 Aligned_cols=108 Identities=34% Similarity=0.685 Sum_probs=101.0
Q ss_pred cceEEEeeCCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEe-CcccccccCCCCCCCccCCCCcEEEe-
Q 020799 24 AETTHVVGGDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASV-TKEAYENCNPASPISRKTTGPAEFSL- 101 (321)
Q Consensus 24 aa~~~~VGg~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v-~~~~Y~~C~~~~~~~~~~~G~~~v~L- 101 (321)
++++|+|||+.||+++++ ..+|++||++++|+|||+|+|+|.+++|+|+|| ++++|+.|+..+++..+++|+++|+|
T Consensus 2 ~a~~~~VGg~~GW~~~~~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~ 80 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSS-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERL 80 (138)
T ss_dssp CCCEEETTGGGCSSCCSS-TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEEC
T ss_pred CceEEEECCcCcCcCCCC-ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEec
Confidence 467899999999999754 478999999999999999999999999999999 99999999999999999999999999
Q ss_pred cccccEEEEecCccccccCceeEEEecCCCC
Q 020799 102 EAAGDYYFICTLELHCTLGQKLAIHVTGPAP 132 (321)
Q Consensus 102 ~~~G~~yFic~~~~HC~~GmKl~I~V~~~~p 132 (321)
+++|++||||++++||++||||+|+|....+
T Consensus 81 ~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 81 DELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp CSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred cCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 9999999999999999999999999997543
No 3
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=6.3e-38 Score=257.38 Aligned_cols=106 Identities=37% Similarity=0.642 Sum_probs=98.7
Q ss_pred ceeeeecCccccccCCCCCcccccccccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCCcccccCCCeEEEeecC
Q 020799 144 PVNYTVGGNIGWAIPPGGALFYASWASFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINSTIAVFTSSPVKITLKFP 223 (321)
Q Consensus 144 a~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~ 223 (321)
+++|+|||+.||++++ ..+|++||++++|+|||+|+|+|.++.|+|+||++++|++|+.++++..+++|+++|+|+++
T Consensus 2 a~~~~VG~~~GW~~~~--~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~ 79 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRP 79 (109)
T ss_dssp CCEEETTGGGCSCSSS--CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSS
T ss_pred CcEEEeCCCCCccCCC--CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCC
Confidence 5789999999999864 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEcCCCCCCCCCCeEEEEEeCCCC
Q 020799 224 GEYYFTSTYLSHCSLGQRLAINVTGTST 251 (321)
Q Consensus 224 G~~yFic~~~~HC~~GmKl~I~V~~~~~ 251 (321)
|++||||++++||++||||+|+|++.++
T Consensus 80 G~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 80 GTFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEECC---
T ss_pred cCEEEECCCCCcccCCCEEEEEEcCCCC
Confidence 9999999999999999999999987543
No 4
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=1.9e-37 Score=257.10 Aligned_cols=106 Identities=40% Similarity=0.759 Sum_probs=97.6
Q ss_pred eeeeecCccccccCCCCCcccccccccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCCcccccCCCeEEEeecCe
Q 020799 145 VNYTVGGNIGWAIPPGGALFYASWASFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINSTIAVFTSSPVKITLKFPG 224 (321)
Q Consensus 145 ~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G 224 (321)
++|+|||+.||+++. ...+|++||++++|+|||+|+|+|.+++|+|+||++++|++|+.++++..+++|+++|+|+++|
T Consensus 2 ~~~~VG~~~GW~~~~-~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPS-DPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGCSSCCS-STTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCE
T ss_pred eEEEECCcCcCcCCC-CCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCC
Confidence 579999999999873 3468999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCCCCCCCeEEE-EEeCCCC
Q 020799 225 EYYFTSTYLSHCSLGQRLAI-NVTGTST 251 (321)
Q Consensus 225 ~~yFic~~~~HC~~GmKl~I-~V~~~~~ 251 (321)
++||||++++||++||||+| +|.+.+.
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred CEEEECCCCCccccCCEEEEEEECCCCC
Confidence 99999999999999999999 8876544
No 5
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=1e-37 Score=256.14 Aligned_cols=104 Identities=38% Similarity=0.769 Sum_probs=98.3
Q ss_pred ceEEEeeCCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCCCCccCCCCcEEEeccc
Q 020799 25 ETTHVVGGDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASPISRKTTGPAEFSLEAA 104 (321)
Q Consensus 25 a~~~~VGg~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~~~~~~~G~~~v~L~~~ 104 (321)
|++|+|||+.||++++ ..+|++||++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|+++|+|+++
T Consensus 2 a~~~~VG~~~GW~~~~--~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~ 79 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRP 79 (109)
T ss_dssp CCEEETTGGGCSCSSS--CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSS
T ss_pred CcEEEeCCCCCccCCC--CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCC
Confidence 5689999999999964 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecCccccccCceeEEEecCC
Q 020799 105 GDYYFICTLELHCTLGQKLAIHVTGP 130 (321)
Q Consensus 105 G~~yFic~~~~HC~~GmKl~I~V~~~ 130 (321)
|++||||++++||++||||+|+|..+
T Consensus 80 G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 80 GTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred cCEEEECCCCCcccCCCEEEEEEcCC
Confidence 99999999999999999999999864
No 6
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=2.9e-37 Score=256.07 Aligned_cols=105 Identities=46% Similarity=0.835 Sum_probs=97.2
Q ss_pred eEEEeeCCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCCCCccCCCCcEEEecccc
Q 020799 26 TTHVVGGDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASPISRKTTGPAEFSLEAAG 105 (321)
Q Consensus 26 ~~~~VGg~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~~~~~~~G~~~v~L~~~G 105 (321)
++|+|||+.||+++. ...+|++|+++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|+++|+|+++|
T Consensus 2 ~~~~VG~~~GW~~~~-~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPS-DPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGCSSCCS-STTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCE
T ss_pred eEEEECCcCcCcCCC-CCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCC
Confidence 479999999999873 2578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCccccccCceeEE-EecCCC
Q 020799 106 DYYFICTLELHCTLGQKLAI-HVTGPA 131 (321)
Q Consensus 106 ~~yFic~~~~HC~~GmKl~I-~V~~~~ 131 (321)
++||||++++||++||||+| +|..+.
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred CEEEECCCCCccccCCEEEEEEECCCC
Confidence 99999999999999999999 777643
No 7
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=5.5e-36 Score=240.63 Aligned_cols=96 Identities=32% Similarity=0.615 Sum_probs=92.4
Q ss_pred eeeeecCccccccCCCCCcccccccccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCCcccccCCCeEEEeecCe
Q 020799 145 VNYTVGGNIGWAIPPGGALFYASWASFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINSTIAVFTSSPVKITLKFPG 224 (321)
Q Consensus 145 ~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G 224 (321)
++|+|||+.||++ +|++||++++|+|||+|+|+|.+++|+|+||++++|++|+.++++..+++|+++|+| ++|
T Consensus 1 ~~~~VG~~~GW~~------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g 73 (96)
T 2cbp_A 1 AVYVVGGSGGWTF------NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKG 73 (96)
T ss_dssp CEEETTGGGCSCS------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSE
T ss_pred CEEEECCcCCCcc------ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCC
Confidence 3699999999996 499999999999999999999999999999999999999999999999999999999 999
Q ss_pred eEEEEcCCCCCCCCCCeEEEEEe
Q 020799 225 EYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 225 ~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
++||||++++||++||||+|+|+
T Consensus 74 ~~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 74 QSYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EEEEECCSTTTGGGTCEEEEEEC
T ss_pred CEEEEcCCCCccccCCEEEEEEC
Confidence 99999999999999999999995
No 8
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.5e-35 Score=238.04 Aligned_cols=96 Identities=33% Similarity=0.700 Sum_probs=91.8
Q ss_pred eEEEeeCCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCCCCccCCCCcEEEecccc
Q 020799 26 TTHVVGGDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASPISRKTTGPAEFSLEAAG 105 (321)
Q Consensus 26 ~~~~VGg~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~~~~~~~G~~~v~L~~~G 105 (321)
++|+|||+.||++ +|++||++++|++||+|+|+|.+++|+|+||++++|+.|+..+++..+++|++.|+| ++|
T Consensus 1 ~~~~VG~~~GW~~------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g 73 (96)
T 2cbp_A 1 AVYVVGGSGGWTF------NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKG 73 (96)
T ss_dssp CEEETTGGGCSCS------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSE
T ss_pred CEEEECCcCCCcc------ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCC
Confidence 3699999999996 499999999999999999999999999999999999999999999899999999999 899
Q ss_pred cEEEEecCccccccCceeEEEec
Q 020799 106 DYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 106 ~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
++||||++++||++||||+|+|+
T Consensus 74 ~~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 74 QSYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EEEEECCSTTTGGGTCEEEEEEC
T ss_pred CEEEEcCCCCccccCCEEEEEEC
Confidence 99999999999999999999985
No 9
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.97 E-value=1.6e-32 Score=218.44 Aligned_cols=91 Identities=30% Similarity=0.576 Sum_probs=86.2
Q ss_pred eeeeecCccccccCCCCCcccccccccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCCcccccCCCeEEEeecCe
Q 020799 145 VNYTVGGNIGWAIPPGGALFYASWASFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINSTIAVFTSSPVKITLKFPG 224 (321)
Q Consensus 145 ~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G 224 (321)
++|+| ||+++ ++||++++|+|||+|+|+|.+++|+|+||++++|++|+.++++..+++|+++|+|+ +|
T Consensus 1 ~~y~V----gW~~~-------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g 68 (91)
T 1f56_A 1 AVYNI----GWSFN-------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RG 68 (91)
T ss_dssp CEEEE----ECSSS-------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SE
T ss_pred CEEEE----eCCCC-------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CC
Confidence 36888 89973 79999999999999999999999999999999999999999999999999999996 89
Q ss_pred eEEEEcCCCCCCCCCCeEEEEEe
Q 020799 225 EYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 225 ~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
++||||++++||++||||+|+|.
T Consensus 69 ~~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 69 QNYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEC
T ss_pred CeEEEcCCCCccccCCEEEEEEC
Confidence 99999999999999999999984
No 10
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.97 E-value=6.4e-32 Score=214.95 Aligned_cols=90 Identities=31% Similarity=0.662 Sum_probs=85.3
Q ss_pred EEEeeCCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCCCCccCCCCcEEEeccccc
Q 020799 27 THVVGGDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASPISRKTTGPAEFSLEAAGD 106 (321)
Q Consensus 27 ~~~VGg~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~~~~~~~G~~~v~L~~~G~ 106 (321)
+|+| ||+++ ++|+++++|++||+|+|+|.+++|+|+||++++|+.|+..+++..+++|++.|+|+ +|+
T Consensus 2 ~y~V----gW~~~-------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~ 69 (91)
T 1f56_A 2 VYNI----GWSFN-------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQ 69 (91)
T ss_dssp EEEE----ECSSS-------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEE
T ss_pred EEEE----eCCCC-------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCC
Confidence 6888 79973 79999999999999999999999999999999999999999999999999999996 899
Q ss_pred EEEEecCccccccCceeEEEec
Q 020799 107 YYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 107 ~yFic~~~~HC~~GmKl~I~V~ 128 (321)
+||||++++||++||||+|+|.
T Consensus 70 ~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 70 NYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EEEECCSTTTTTTTCEEEEEEC
T ss_pred eEEEcCCCCccccCCEEEEEEC
Confidence 9999999999999999999984
No 11
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.15 E-value=8.8e-11 Score=98.45 Aligned_cols=95 Identities=17% Similarity=0.217 Sum_probs=65.8
Q ss_pred CceeeeecCc-cccccCCCCCcccccccccceeEeCCEEEEeecC-----CCCcEEEeCcc-ccccc-------------
Q 020799 143 TPVNYTVGGN-IGWAIPPGGALFYASWASFYSFFVCDTLVFNFAN-----GTQDVAIVPKD-VYETC------------- 202 (321)
Q Consensus 143 sa~~~~VGg~-~gW~~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~-----~~h~V~~V~~~-~y~~C------------- 202 (321)
...++.|+-. .+|.+.+ +..+++.||+|.|.|.+ ..|+++..... ++..+
T Consensus 15 ~~~~v~V~~~~~~~~F~P----------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (140)
T 1qhq_A 15 PAQTVEVRAAPDALAFAQ----------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALF 84 (140)
T ss_dssp CSEEEEEEBCSSSSSBSC----------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTT
T ss_pred CCEEEEEEEeCCCceEeC----------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccc
Confidence 3456777653 3477644 46899999999999876 57999887532 22111
Q ss_pred ----cCC------CCcccccCCCeEEEeecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 203 ----NIN------STIAVFTSSPVKITLKFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 203 ----~~~------~p~~~~~~G~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
+.. ..+....++..+|+++++|.|||+|++++||+.|||+.|+|.
T Consensus 85 ~~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 85 VPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cCccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 000 111222234457888999999999999999999999999985
No 12
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.13 E-value=6.7e-11 Score=99.16 Aligned_cols=96 Identities=19% Similarity=0.289 Sum_probs=66.3
Q ss_pred ccceEEEeeCC-CCCcCCCCCCcCcccccCCCeeEeCCEEEEEecC-----CCccEEEeCcc-ccccc------------
Q 020799 23 AAETTHVVGGD-LGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTT-----GQQDVASVTKE-AYENC------------ 83 (321)
Q Consensus 23 aaa~~~~VGg~-~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~-----~~hsV~~v~~~-~Y~~C------------ 83 (321)
++..++.|+-. .+|.+.+. ..+++.||+|.|.+.+ ..|+++..... ++..+
T Consensus 14 ~~~~~v~V~~~~~~~~F~P~----------~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQT----------SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADAL 83 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSCS----------EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGT
T ss_pred CCCEEEEEEEeCCCceEeCC----------eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhccccc
Confidence 34456777753 46888653 5789999999998876 57999887432 22111
Q ss_pred -----CCC------CCCCccCCCCcEEEecccccEEEEecCccccccCceeEEEec
Q 020799 84 -----NPA------SPISRKTTGPAEFSLEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 84 -----~~~------~~~~~~~~G~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
+.. ..+....++..+|+++++|.|||+|++++||+.|||..|+|.
T Consensus 84 ~~~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 84 FVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TCCCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ccCccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 000 011112233456888899999999999999999999999996
No 13
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.01 E-value=3.7e-10 Score=97.08 Aligned_cols=76 Identities=17% Similarity=0.162 Sum_probs=59.3
Q ss_pred cceeEeCCEEEEeecCC----CCcEEEeCc-cccccccCCCCccc-------ccCCC---e--EEEeecCeeEEEEcCCC
Q 020799 171 FYSFFVCDTLVFNFANG----TQDVAIVPK-DVYETCNINSTIAV-------FTSSP---V--KITLKFPGEYYFTSTYL 233 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~----~h~V~~V~~-~~y~~C~~~~p~~~-------~~~G~---~--~v~L~~~G~~yFic~~~ 233 (321)
..++++||+|+|++.+. .|++..++. .+|+.|.....+.. ...|. . +|++ ++|+|||+|+++
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 57999999999999753 699999964 47878876543321 12332 3 5678 999999999999
Q ss_pred CCCCCCCeEEEEEe
Q 020799 234 SHCSLGQRLAINVT 247 (321)
Q Consensus 234 ~HC~~GmKl~I~V~ 247 (321)
+||+.|||..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999984
No 14
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.98 E-value=6.7e-10 Score=85.55 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=53.9
Q ss_pred ccceeEeCCEEEEeecC-CCCcEEEeCccccccccCCCCcccccCC-CeEEEeecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 170 SFYSFFVCDTLVFNFAN-GTQDVAIVPKDVYETCNINSTIAVFTSS-PVKITLKFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~-~~h~V~~V~~~~y~~C~~~~p~~~~~~G-~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
+..++++||+|.|.+.. ..|+|......++. .....+..| ..+++++++|+|+|+|. .||..||+..|+|.
T Consensus 19 ~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-----~~~~~~~~g~~~~~~f~~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 19 STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-----HKDLAFSPGETFEATFSEPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SEEEECTTCEEEEEECSSCCEEEEETTCGGGC-----EEEEECSTTCEEEEECCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEECCCCEEEEEECCCCCcEEEEeCCCccC-----cccceeCCCCEEEEEeCCCEEEEEEeC--CCccCCCEEEEEEC
Confidence 35799999999999874 68999876643321 011223344 45788999999999999 89999999999984
No 15
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.97 E-value=6.8e-10 Score=85.51 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=61.1
Q ss_pred EEEeeCC-CCCcCCCCCCcCcccccCCCeeEeCCEEEEEecC-CCccEEEeCcccccccCCCCCCCccCCC-CcEEEecc
Q 020799 27 THVVGGD-LGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTT-GQQDVASVTKEAYENCNPASPISRKTTG-PAEFSLEA 103 (321)
Q Consensus 27 ~~~VGg~-~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~-~~hsV~~v~~~~Y~~C~~~~~~~~~~~G-~~~v~L~~ 103 (321)
+..+|++ .+|.+.|+ ..++++||+|.|.+.. ..|+|.......+. . .. .....| ..++++++
T Consensus 4 ~v~~~~~~~~~~f~P~----------~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-~---~~-~~~~~g~~~~~~f~~ 68 (91)
T 1bxv_A 4 AIKMGADNGMLAFEPS----------TIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-H---KD-LAFSPGETFEATFSE 68 (91)
T ss_dssp EEEESCTTSCSSEESS----------EEEECTTCEEEEEECSSCCEEEEETTCGGGC-E---EE-EECSTTCEEEEECCS
T ss_pred EEEEecCCCccEEeCC----------EEEECCCCEEEEEECCCCCcEEEEeCCCccC-c---cc-ceeCCCCEEEEEeCC
Confidence 3456654 46777653 5689999999999874 68999876533221 0 00 123334 46788999
Q ss_pred cccEEEEecCccccccCceeEEEec
Q 020799 104 AGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 104 ~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
+|.|+|+|+ .||..||+..|.|.
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 79999999999984
No 16
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.91 E-value=1.6e-09 Score=93.18 Aligned_cols=76 Identities=18% Similarity=0.301 Sum_probs=58.4
Q ss_pred CCeeEeCCEEEEEecCC----CccEEEeC-cccccccCCCCCCC-------ccCCCC---c--EEEecccccEEEEecCc
Q 020799 52 MQTFSVGDILLFNFTTG----QQDVASVT-KEAYENCNPASPIS-------RKTTGP---A--EFSLEAAGDYYFICTLE 114 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~----~hsV~~v~-~~~Y~~C~~~~~~~-------~~~~G~---~--~v~L~~~G~~yFic~~~ 114 (321)
..++++||+|+|++.+. .|++..++ ...|+.|.....+. ....|. . +|++ ++|+|||+|+++
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 46889999999999753 69999984 45787886554321 122332 2 5678 999999999999
Q ss_pred cccccCceeEEEec
Q 020799 115 LHCTLGQKLAIHVT 128 (321)
Q Consensus 115 ~HC~~GmKl~I~V~ 128 (321)
+||+.|||..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999884
No 17
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.73 E-value=2.7e-08 Score=82.41 Aligned_cols=81 Identities=20% Similarity=0.314 Sum_probs=58.7
Q ss_pred eCCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEeCcccccccCCCC--CCCccCCC-CcEEEecccccE
Q 020799 31 GGDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPAS--PISRKTTG-PAEFSLEAAGDY 107 (321)
Q Consensus 31 Gg~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~--~~~~~~~G-~~~v~L~~~G~~ 107 (321)
|++.++.+.|. ..++++||+|.|.+....|+|... +.|.... .... ..| ..+++++++|.|
T Consensus 11 g~~g~~~F~P~----------~i~V~~GdtV~f~~~~~~H~v~~~-----~~~~p~~~~~~~~-~pG~t~~~tF~~~G~y 74 (123)
T 1paz_A 11 GAEGAMVFEPA----------YIKANPGDTVTFIPVDKGHNVESI-----KDMIPEGAEKFKS-KINENYVLTVTQPGAY 74 (123)
T ss_dssp ETTEEEEEESS----------EEEECTTCEEEEEESSSSCCCEEC-----TTCSCTTCCCCBC-CTTCCEEEECCSCEEE
T ss_pred cCCCCceEeCC----------EEEECCCCEEEEEECCCCeEEEEe-----cccCCCCccceec-CCCCEEEEEeCCCEEE
Confidence 55445666553 568999999999998778999864 1222211 1111 123 357899999999
Q ss_pred EEEecCccccccCceeEEEecC
Q 020799 108 YFICTLELHCTLGQKLAIHVTG 129 (321)
Q Consensus 108 yFic~~~~HC~~GmKl~I~V~~ 129 (321)
+|+|+ .||..||+..|+|..
T Consensus 75 ~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 75 LVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp EEECT--TTGGGTCEEEEEESS
T ss_pred EEEeC--CcccCCCEEEEEEcC
Confidence 99998 499999999999985
No 18
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.72 E-value=2.5e-08 Score=82.69 Aligned_cols=83 Identities=22% Similarity=0.319 Sum_probs=59.4
Q ss_pred eCCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCCCC-ccCCC-CcEEEecccccEE
Q 020799 31 GGDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASPIS-RKTTG-PAEFSLEAAGDYY 108 (321)
Q Consensus 31 Gg~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~~~-~~~~G-~~~v~L~~~G~~y 108 (321)
|++.++.+.|. ..++++||+|.|.+....|+|+... .|....... ....| ..+++++++|.|+
T Consensus 11 g~~g~~~F~P~----------~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~ 75 (123)
T 1pmy_A 11 GPGGMMVFDPA----------LVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYG 75 (123)
T ss_dssp ETTEEEEEESS----------EEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEE
T ss_pred cCCCCceEeCC----------EEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEE
Confidence 54445666553 5689999999999987799998752 222221110 11123 3578999999999
Q ss_pred EEecCccccccCceeEEEecCC
Q 020799 109 FICTLELHCTLGQKLAIHVTGP 130 (321)
Q Consensus 109 Fic~~~~HC~~GmKl~I~V~~~ 130 (321)
|+|+ .||..||+..|+|..+
T Consensus 76 y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 76 FKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp EECS--TTTTTTCEEEEEESSC
T ss_pred EEeC--CccccCCEEEEEEcCC
Confidence 9999 4999999999999853
No 19
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.71 E-value=2e-08 Score=79.00 Aligned_cols=76 Identities=17% Similarity=0.139 Sum_probs=54.2
Q ss_pred ccceeEeCCEEEEeecC-CCCcEEEeCc---cccccccCCCCcccccCCC-eEEEeecCeeEEEEcCCCCCCCCCCeEEE
Q 020799 170 SFYSFFVCDTLVFNFAN-GTQDVAIVPK---DVYETCNINSTIAVFTSSP-VKITLKFPGEYYFTSTYLSHCSLGQRLAI 244 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~-~~h~V~~V~~---~~y~~C~~~~p~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl~I 244 (321)
+..++++||+|.|.+.. ..|+|...+. +.++.+........+..|. .+++++++|.|+|+|.. ||+.||+..|
T Consensus 18 ~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf~~~G~y~y~C~~--H~~~gM~G~I 95 (98)
T 1iuz_A 18 SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLSTPGVYGVYCEP--HAGAGMKMTI 95 (98)
T ss_dssp SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECCSCEEEEEECTT--TGGGTCEEEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEcCCCEEEEEEchh--hccCCCEEEE
Confidence 36899999999999875 4899986642 1233322111112234454 47889999999999995 9999999999
Q ss_pred EEe
Q 020799 245 NVT 247 (321)
Q Consensus 245 ~V~ 247 (321)
.|.
T Consensus 96 ~V~ 98 (98)
T 1iuz_A 96 TVQ 98 (98)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 20
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.69 E-value=6.7e-08 Score=80.05 Aligned_cols=73 Identities=14% Similarity=0.158 Sum_probs=53.6
Q ss_pred ccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCCc-ccccCC-CeEEEeecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 170 SFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINSTI-AVFTSS-PVKITLKFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p~-~~~~~G-~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
+..++++||+|.|.+....|+|+... .|...... .....| ..+++++++|.|+|+|. .||..||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEc
Confidence 35899999999999987789998752 12111100 011123 35799999999999998 59999999999997
Q ss_pred CC
Q 020799 248 GT 249 (321)
Q Consensus 248 ~~ 249 (321)
..
T Consensus 94 ~~ 95 (123)
T 1pmy_A 94 DK 95 (123)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 21
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.68 E-value=6.6e-08 Score=80.78 Aligned_cols=94 Identities=21% Similarity=0.258 Sum_probs=64.3
Q ss_pred cceEEEee-CCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCC----CccEEEeCcc------------------cc
Q 020799 24 AETTHVVG-GDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTG----QQDVASVTKE------------------AY 80 (321)
Q Consensus 24 aa~~~~VG-g~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~----~hsV~~v~~~------------------~Y 80 (321)
+..++.|| +..++.+.++ ..++++||++.|.+.+. .|++...... +|
T Consensus 17 ~~~~V~v~~~~~~~~F~p~----------~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~ 86 (139)
T 2aan_A 17 GPVTIEIGSKGEELAFDKT----------ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANY 86 (139)
T ss_dssp CCEEEEEEBCTTSSSBSCS----------EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTT
T ss_pred cCEEEEEEecCCccEEcCC----------eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccc
Confidence 44456675 2346777653 56899999999887654 7999987532 46
Q ss_pred cccCCCCCC---CccCCCC-cEE--EecccccEEEEecCccccccCceeEEEec
Q 020799 81 ENCNPASPI---SRKTTGP-AEF--SLEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 81 ~~C~~~~~~---~~~~~G~-~~v--~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
..|...+.+ ..+..|. .+| +++++|.|+|+|.+.+||+ ||+..|.|.
T Consensus 87 ~p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 87 LPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CCSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred cCcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 666533211 1233443 344 4458999999999999999 999999884
No 22
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.67 E-value=3.6e-08 Score=77.34 Aligned_cols=76 Identities=18% Similarity=0.273 Sum_probs=53.8
Q ss_pred ccceeEeCCEEEEeecCC-CCcEEEeCcc---ccccccCC--CCcccccCCC-eEEEeecCeeEEEEcCCCCCCCCCCeE
Q 020799 170 SFYSFFVCDTLVFNFANG-TQDVAIVPKD---VYETCNIN--STIAVFTSSP-VKITLKFPGEYYFTSTYLSHCSLGQRL 242 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~-~h~V~~V~~~---~y~~C~~~--~p~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl 242 (321)
+..++++||+|.|.+..+ .|+|...+.. ..+.+... ........|. .+++++++|+|.|+|. +||++||+.
T Consensus 17 ~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~~~G~y~~~C~--~H~~~gM~G 94 (99)
T 1plc_A 17 SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCS--PHQGAGMVG 94 (99)
T ss_dssp SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECCSCEEEEEECG--GGTTTTCEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEECCCceEEEEcC--CCcccCCEE
Confidence 468999999999988754 8999876532 12222110 0001233443 4789999999999999 899999999
Q ss_pred EEEEe
Q 020799 243 AINVT 247 (321)
Q Consensus 243 ~I~V~ 247 (321)
.|+|.
T Consensus 95 ~i~V~ 99 (99)
T 1plc_A 95 KVTVN 99 (99)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99984
No 23
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.67 E-value=1e-07 Score=79.55 Aligned_cols=77 Identities=17% Similarity=0.221 Sum_probs=55.6
Q ss_pred ccceeEeCCEEEEeecCC----CCcEEEeCcc------------------ccccccCCCCc---ccccCCC-eE--EEee
Q 020799 170 SFYSFFVCDTLVFNFANG----TQDVAIVPKD------------------VYETCNINSTI---AVFTSSP-VK--ITLK 221 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~----~h~V~~V~~~------------------~y~~C~~~~p~---~~~~~G~-~~--v~L~ 221 (321)
...++++||+|.|.+.+. .|+++....+ +|..|...+.+ ..+..|. .+ |+++
T Consensus 35 ~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~~ 114 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAP 114 (139)
T ss_dssp SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEECC
T ss_pred CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEECC
Confidence 457899999999888643 7999988632 46666533211 1234453 24 4445
Q ss_pred cCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 222 FPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 222 ~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
++|.|+|+|.+++||+ ||+..|.|.
T Consensus 115 ~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 115 AAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp SSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 8999999999999999 999999884
No 24
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.66 E-value=3.5e-08 Score=78.09 Aligned_cols=90 Identities=17% Similarity=0.148 Sum_probs=59.3
Q ss_pred eeeecCc-cccccCCCCCcccccccccceeEeCCEEEEeecC-CCCcEEEeCcccc-----ccccCCCCcccccCC-CeE
Q 020799 146 NYTVGGN-IGWAIPPGGALFYASWASFYSFFVCDTLVFNFAN-GTQDVAIVPKDVY-----ETCNINSTIAVFTSS-PVK 217 (321)
Q Consensus 146 ~~~VGg~-~gW~~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~-~~h~V~~V~~~~y-----~~C~~~~p~~~~~~G-~~~ 217 (321)
++.+|.+ .++.+.+ ...++++||+|.|.+.. ..|+|...+.... +.............| ..+
T Consensus 5 ~V~~~~~~~~~~F~P----------~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~ 74 (106)
T 2gim_A 5 TVKLGSDKGLLVFEP----------AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTS 74 (106)
T ss_dssp EEEESCTTCCSSEES----------SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEE
T ss_pred EEEEEecCCcceEcC----------CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEEE
Confidence 4556543 4565543 35789999999999764 5799986543211 000000001122334 347
Q ss_pred EEe---ecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 218 ITL---KFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 218 v~L---~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
+++ +++|.|+|+|. .||++||+..|+|.
T Consensus 75 ~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 75 TTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 888 89999999999 89999999999996
No 25
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.65 E-value=7.9e-08 Score=79.60 Aligned_cols=71 Identities=18% Similarity=0.235 Sum_probs=52.9
Q ss_pred ccceeEeCCEEEEeecCCCCcEEEeCccccccccCCC--CcccccCC-CeEEEeecCeeEEEEcCCCCCCCCCCeEEEEE
Q 020799 170 SFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINS--TIAVFTSS-PVKITLKFPGEYYFTSTYLSHCSLGQRLAINV 246 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~--p~~~~~~G-~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V 246 (321)
+..++++||+|.|.+....|+|.... .|.... .... ..| ..+++++++|.|+|+|. .||+.||+..|+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~-~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V 92 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKS-KINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAV 92 (123)
T ss_dssp SEEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBC-CTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CEEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceec-CCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEE
Confidence 35899999999999987789998642 121111 1111 123 34789999999999998 5999999999999
Q ss_pred eC
Q 020799 247 TG 248 (321)
Q Consensus 247 ~~ 248 (321)
..
T Consensus 93 ~~ 94 (123)
T 1paz_A 93 GD 94 (123)
T ss_dssp SS
T ss_pred cC
Confidence 75
No 26
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.65 E-value=1e-07 Score=75.39 Aligned_cols=90 Identities=21% Similarity=0.201 Sum_probs=59.8
Q ss_pred EEEeeCC-CCCcCCCCCCcCcccccCCCeeEeCCEEEEEecC-CCccEEEeCccccc-----ccCCCCCCCccCCC-CcE
Q 020799 27 THVVGGD-LGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTT-GQQDVASVTKEAYE-----NCNPASPISRKTTG-PAE 98 (321)
Q Consensus 27 ~~~VGg~-~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~-~~hsV~~v~~~~Y~-----~C~~~~~~~~~~~G-~~~ 98 (321)
+..+|.+ .++.+.|. ..++++||+|.|.+.. ..|++...+....+ .............| ..+
T Consensus 5 ~V~~~~~~~~~~F~P~----------~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~ 74 (106)
T 2gim_A 5 TVKLGSDKGLLVFEPA----------KLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTS 74 (106)
T ss_dssp EEEESCTTCCSSEESS----------EEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEE
T ss_pred EEEEEecCCcceEcCC----------EEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEEE
Confidence 4556643 56777653 5689999999998764 47999865322110 00000001112334 357
Q ss_pred EEe---cccccEEEEecCccccccCceeEEEec
Q 020799 99 FSL---EAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 99 v~L---~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
+++ +++|.|+|+|. .||++||+..|.|.
T Consensus 75 ~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 75 TTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 788 88999999999 79999999999986
No 27
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.62 E-value=5.6e-08 Score=80.63 Aligned_cols=71 Identities=20% Similarity=0.293 Sum_probs=53.8
Q ss_pred CCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCC--CCccCCCCcEEEecccccEEEEecCccccccCceeEEEecC
Q 020799 52 MQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASP--ISRKTTGPAEFSLEAAGDYYFICTLELHCTLGQKLAIHVTG 129 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~--~~~~~~G~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~~ 129 (321)
..++++||++.|......|+|...+. |...+. ...--+...+++++++|.|+|+|. .||..||+-.|.|..
T Consensus 22 ~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 57899999999999888899986421 222211 111112346889999999999999 699999999999986
No 28
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.61 E-value=3.7e-08 Score=77.40 Aligned_cols=90 Identities=18% Similarity=0.220 Sum_probs=60.1
Q ss_pred EEEeeC-CCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecC-CCccEEEeCc---ccccccCCCCCCCccCCCC-cEEE
Q 020799 27 THVVGG-DLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTT-GQQDVASVTK---EAYENCNPASPISRKTTGP-AEFS 100 (321)
Q Consensus 27 ~~~VGg-~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~-~~hsV~~v~~---~~Y~~C~~~~~~~~~~~G~-~~v~ 100 (321)
+..+|+ +.++.+.|. ..++++||+|.|.... ..|+|...+. ++++.+...........|. .+++
T Consensus 3 ~V~m~~~~~~~~F~P~----------~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~t 72 (98)
T 1iuz_A 3 IVKLGGDDGSLAFVPS----------KISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRK 72 (98)
T ss_dssp EEEESCTTSCCSEESS----------EEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEecCCCCcEEeCC----------EEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEE
Confidence 344554 456777653 5689999999998765 4899986532 1222221110001233444 4788
Q ss_pred ecccccEEEEecCccccccCceeEEEec
Q 020799 101 LEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 101 L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
++++|.|+|+|.. ||+.||+..|.|.
T Consensus 73 f~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 73 LSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred cCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999999996 9999999999884
No 29
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.61 E-value=1.2e-07 Score=74.39 Aligned_cols=89 Identities=19% Similarity=0.321 Sum_probs=59.6
Q ss_pred EEeeC-CCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCC-CccEEEeCcc---cccccCCC--CCCCccCCCC-cEE
Q 020799 28 HVVGG-DLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTG-QQDVASVTKE---AYENCNPA--SPISRKTTGP-AEF 99 (321)
Q Consensus 28 ~~VGg-~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~-~hsV~~v~~~---~Y~~C~~~--~~~~~~~~G~-~~v 99 (321)
..+|+ +.++.+.|. ..++++||+|.|+...+ .|+|...+.. +.+.+... ........|. .++
T Consensus 3 v~m~~~~~~~~F~P~----------~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~ 72 (99)
T 1plc_A 3 VLLGADDGSLAFVPS----------EFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEV 72 (99)
T ss_dssp EEESCTTCCSCEESS----------EEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEE
T ss_pred EEEecCCCcceEeCC----------EEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEE
Confidence 45664 345666542 56899999999987654 8999876432 12222100 0001223343 578
Q ss_pred EecccccEEEEecCccccccCceeEEEec
Q 020799 100 SLEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 100 ~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
+++++|.|+|+|. .||+.||+..|.|.
T Consensus 73 tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 73 ALSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp ECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 8999999999999 79999999999984
No 30
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.58 E-value=8.8e-08 Score=79.91 Aligned_cols=84 Identities=21% Similarity=0.275 Sum_probs=60.3
Q ss_pred eeCCC-CCcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCC--CCccCCCCcEEEeccccc
Q 020799 30 VGGDL-GWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASP--ISRKTTGPAEFSLEAAGD 106 (321)
Q Consensus 30 VGg~~-GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~--~~~~~~G~~~v~L~~~G~ 106 (321)
+|.+. +..+.|. ..++++||+|.|.+....|+|...+. +..... ...--+...+++++++|.
T Consensus 11 ~g~~g~~~~F~P~----------~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~ 75 (127)
T 3tu6_A 11 KAADGRVMAFEPA----------VIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGV 75 (127)
T ss_dssp ECTTSCEEEEESS----------EEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEE
T ss_pred cCCCCcccEEeCC----------EEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeE
Confidence 35443 4676553 57899999999999877899986532 111111 111112236899999999
Q ss_pred EEEEecCccccccCceeEEEecCC
Q 020799 107 YYFICTLELHCTLGQKLAIHVTGP 130 (321)
Q Consensus 107 ~yFic~~~~HC~~GmKl~I~V~~~ 130 (321)
|+|+|. .||..||+..|.|..+
T Consensus 76 y~y~C~--~H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 76 YMYQCA--PHVGMGMIGAIVVGEP 97 (127)
T ss_dssp EEEECT--TTGGGTCEEEEEESSC
T ss_pred EEEEeC--CCCcCCcEEEEEECcC
Confidence 999999 5999999999999864
No 31
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.57 E-value=1.4e-07 Score=78.29 Aligned_cols=72 Identities=17% Similarity=0.192 Sum_probs=54.1
Q ss_pred ccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCC--cccccCCCeEEEeecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 170 SFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINST--IAVFTSSPVKITLKFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p--~~~~~~G~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
+..++++||+|.|.+....|+|...+. |..... ...--....+++++++|.|+|+|. .||..||+-.|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 468999999999999888899986432 111111 111112245899999999999999 89999999999998
Q ss_pred C
Q 020799 248 G 248 (321)
Q Consensus 248 ~ 248 (321)
.
T Consensus 94 ~ 94 (123)
T 3erx_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 6
No 32
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.57 E-value=1.3e-07 Score=74.40 Aligned_cols=76 Identities=13% Similarity=0.136 Sum_probs=53.8
Q ss_pred ccceeEeCCEEEEeecC-CCCcEEEeCccccc----cccCCCC----cccccCC-CeEEEeecCeeEEEEcCCCCCCCCC
Q 020799 170 SFYSFFVCDTLVFNFAN-GTQDVAIVPKDVYE----TCNINST----IAVFTSS-PVKITLKFPGEYYFTSTYLSHCSLG 239 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~-~~h~V~~V~~~~y~----~C~~~~p----~~~~~~G-~~~v~L~~~G~~yFic~~~~HC~~G 239 (321)
...++++||+|.|.+.. ..|+|...+.+.++ .|..... ......| ..+++++++|+|.|+|. +||++|
T Consensus 17 ~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~y~C~--~H~~~g 94 (102)
T 1kdj_A 17 DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKVSTPGTYTFYCT--PHKSAN 94 (102)
T ss_dssp SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCCSCEEEEEECS--TTGGGT
T ss_pred CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEeCCCeEEEEEeC--CCcccC
Confidence 35799999999999765 47999876543331 1211111 1123334 34788899999999999 999999
Q ss_pred CeEEEEEe
Q 020799 240 QRLAINVT 247 (321)
Q Consensus 240 mKl~I~V~ 247 (321)
|+..|.|.
T Consensus 95 M~G~i~V~ 102 (102)
T 1kdj_A 95 MKGTLTVK 102 (102)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 33
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.55 E-value=1.1e-07 Score=74.32 Aligned_cols=76 Identities=18% Similarity=0.197 Sum_probs=53.6
Q ss_pred ccceeEeCCEEEEeecCC-CCcEEEeCc---cccccccCC--CCcccccCCC-eEEEeecCeeEEEEcCCCCCCCCCCeE
Q 020799 170 SFYSFFVCDTLVFNFANG-TQDVAIVPK---DVYETCNIN--STIAVFTSSP-VKITLKFPGEYYFTSTYLSHCSLGQRL 242 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~-~h~V~~V~~---~~y~~C~~~--~p~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl 242 (321)
+..++++||+|.|++... .|+|...+. +.++.+... .....+..|. .+++++++|.|.|+|. .||++||+.
T Consensus 17 ~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~~~G~y~~~C~--~H~~~gM~G 94 (99)
T 1byp_A 17 SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCA--PHAGAGMVG 94 (99)
T ss_dssp SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECSCEEEEEECG--GGTTTTCEE
T ss_pred CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeCCCcEEEEEcC--CccccCCEE
Confidence 357899999999988753 799987643 123322110 0001233443 4788999999999999 899999999
Q ss_pred EEEEe
Q 020799 243 AINVT 247 (321)
Q Consensus 243 ~I~V~ 247 (321)
.|+|.
T Consensus 95 ~i~V~ 99 (99)
T 1byp_A 95 KVTVN 99 (99)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99984
No 34
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.55 E-value=7.8e-08 Score=75.01 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=53.2
Q ss_pred ccceeEeCCEEEEeecCC-CCcEEEeCc---cccccccCCCCcccccCCC-eEEEeecCeeEEEEcCCCCCCCCCCeEEE
Q 020799 170 SFYSFFVCDTLVFNFANG-TQDVAIVPK---DVYETCNINSTIAVFTSSP-VKITLKFPGEYYFTSTYLSHCSLGQRLAI 244 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~-~h~V~~V~~---~~y~~C~~~~p~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl~I 244 (321)
...++++||+|.|.+..+ .|++..... ++++.+........+..|. .+++++++|+|.|+|. .||+.||+..|
T Consensus 18 ~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~y~C~--~H~~~gM~G~i 95 (98)
T 2plt_A 18 KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTAAGEYGYYCE--PHQGAGMVGKI 95 (98)
T ss_dssp SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCSCEEEEEECG--GGGGGTCEEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCCCeEEEEEcC--CccccCCeEEE
Confidence 357899999999988753 799986542 1222221111011233454 4788999999999999 79999999999
Q ss_pred EEe
Q 020799 245 NVT 247 (321)
Q Consensus 245 ~V~ 247 (321)
+|.
T Consensus 96 ~V~ 98 (98)
T 2plt_A 96 IVQ 98 (98)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 35
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.54 E-value=2.3e-07 Score=72.26 Aligned_cols=74 Identities=23% Similarity=0.249 Sum_probs=52.6
Q ss_pred ccceeEeCCEEEEeecC-CCCcEEEeCccc---cccccCCCCcccccCC-CeEEEeecCeeEEEEcCCCCCCCCCCeEEE
Q 020799 170 SFYSFFVCDTLVFNFAN-GTQDVAIVPKDV---YETCNINSTIAVFTSS-PVKITLKFPGEYYFTSTYLSHCSLGQRLAI 244 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~-~~h~V~~V~~~~---y~~C~~~~p~~~~~~G-~~~v~L~~~G~~yFic~~~~HC~~GmKl~I 244 (321)
+..++++||+|.|.+.. ..|++...+... .+.+.... .....| ..+++++++|.|.|+|. +||+.||+..|
T Consensus 19 ~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~tf~~~G~y~y~C~--~H~~~gM~G~i 94 (97)
T 1b3i_A 19 KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK--LAIAPGSFYSVTLGTPGTYSFYCT--PHRGAGMVGTI 94 (97)
T ss_dssp SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC--CCCSCSCCEEEECCSCSEEEEECS--STTTTTCEEEE
T ss_pred CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc--eecCCCCEEEEEeCCCeEEEEEcc--ChhhcCCEEEE
Confidence 35799999999999765 479998764321 11111111 122333 45788999999999999 99999999999
Q ss_pred EEe
Q 020799 245 NVT 247 (321)
Q Consensus 245 ~V~ 247 (321)
+|.
T Consensus 95 ~V~ 97 (97)
T 1b3i_A 95 TVE 97 (97)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 36
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.52 E-value=2e-07 Score=72.69 Aligned_cols=88 Identities=24% Similarity=0.289 Sum_probs=59.5
Q ss_pred EEEeeCC-CCCcCCCCCCcCcccccCCCeeEeCCEEEEEecC-CCccEEEeCccc---ccccCCCCCCCccCCC-CcEEE
Q 020799 27 THVVGGD-LGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTT-GQQDVASVTKEA---YENCNPASPISRKTTG-PAEFS 100 (321)
Q Consensus 27 ~~~VGg~-~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~-~~hsV~~v~~~~---Y~~C~~~~~~~~~~~G-~~~v~ 100 (321)
+..+|++ .++.+.|. ..++++||+|.|.... ..|++...+... .+.+.... . ....| ..+++
T Consensus 4 ~V~~~~~~~~~~F~P~----------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~~~t 71 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEPK----------ALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK-L-AIAPGSFYSVT 71 (97)
T ss_dssp EEEEEETTTEEEEESS----------EEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC-C-CCSCSCCEEEE
T ss_pred EEEEeccCCccEEeCC----------EEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc-e-ecCCCCEEEEE
Confidence 4456643 55666552 4689999999998765 379998763221 11111111 1 12233 45788
Q ss_pred ecccccEEEEecCccccccCceeEEEec
Q 020799 101 LEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 101 L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 f~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 72 LGTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CCSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred eCCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 899999999999 89999999999884
No 37
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.52 E-value=1.7e-07 Score=78.14 Aligned_cols=73 Identities=19% Similarity=0.214 Sum_probs=54.3
Q ss_pred ccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCCcc-cccCC-CeEEEeecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 170 SFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINSTIA-VFTSS-PVKITLKFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p~~-~~~~G-~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
+..++++||+|.|.+....|+|...+. +....... ....| ..+++++++|.|+|+|. .||..||+..|+|.
T Consensus 23 ~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 468999999999999877899986542 11111000 00123 35899999999999999 69999999999998
Q ss_pred CC
Q 020799 248 GT 249 (321)
Q Consensus 248 ~~ 249 (321)
..
T Consensus 96 ~~ 97 (127)
T 3tu6_A 96 EP 97 (127)
T ss_dssp SC
T ss_pred cC
Confidence 64
No 38
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.52 E-value=2.3e-07 Score=77.17 Aligned_cols=82 Identities=23% Similarity=0.362 Sum_probs=60.4
Q ss_pred eCCCC--CcCCCCCCcCcccccCCCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCCC-CccCCC-CcEEEeccccc
Q 020799 31 GGDLG--WQIPPGGAIAYVTWASMQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASPI-SRKTTG-PAEFSLEAAGD 106 (321)
Q Consensus 31 Gg~~G--W~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~~-~~~~~G-~~~v~L~~~G~ 106 (321)
+|++| +.+.|. ..++++||+|.|.+....|+|...+. +...+.. .....| ..+++++++|.
T Consensus 10 ~g~~G~~~~F~P~----------~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~ 74 (124)
T 3ef4_A 10 KDDAGNTMVFQPG----------FVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGL 74 (124)
T ss_dssp ECTTSCEEEEESS----------EEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEE
T ss_pred cCCCCceeEEeCC----------EEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeE
Confidence 34455 887663 57899999999999888999987522 2222211 111223 36889999999
Q ss_pred EEEEecCccccccCceeEEEecC
Q 020799 107 YYFICTLELHCTLGQKLAIHVTG 129 (321)
Q Consensus 107 ~yFic~~~~HC~~GmKl~I~V~~ 129 (321)
|.|+|. .||..||+-.|+|..
T Consensus 75 y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 75 YVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp EEEECT--TTGGGTCEEEEEESS
T ss_pred EEEEcC--CCCcCCCEEEEEECC
Confidence 999998 699999999999986
No 39
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.52 E-value=1.5e-07 Score=73.57 Aligned_cols=89 Identities=20% Similarity=0.303 Sum_probs=59.6
Q ss_pred EEeeC-CCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCC-CccEEEeCcc---cccccCCC--CCCCccCCC-CcEE
Q 020799 28 HVVGG-DLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTG-QQDVASVTKE---AYENCNPA--SPISRKTTG-PAEF 99 (321)
Q Consensus 28 ~~VGg-~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~-~hsV~~v~~~---~Y~~C~~~--~~~~~~~~G-~~~v 99 (321)
..+|+ +.++.+.|. ..++++||+|.|+.... .|+|...+.. .++.+... ........| ..++
T Consensus 3 V~~~~~~~~~~F~P~----------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~ 72 (99)
T 1byp_A 3 VLLGSSDGGLAFVPS----------DLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSV 72 (99)
T ss_dssp EEESCTTSCCSEESS----------EEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEE
T ss_pred EEEecCCCcceEeCC----------EEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEE
Confidence 45654 446666552 46899999999987653 7999876421 22222110 000122334 3578
Q ss_pred EecccccEEEEecCccccccCceeEEEec
Q 020799 100 SLEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 100 ~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
+++++|.|.|+|. .||+.||+..|.|.
T Consensus 73 ~f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 73 TLTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EeCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 8999999999999 79999999999884
No 40
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.50 E-value=2.3e-07 Score=73.00 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=60.0
Q ss_pred EEeeCC-CCCcCCCCCCcCcccccCCCeeEeCCEEEEEecC-CCccEEEeCccccc----ccCCCCCC----CccCCC-C
Q 020799 28 HVVGGD-LGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTT-GQQDVASVTKEAYE----NCNPASPI----SRKTTG-P 96 (321)
Q Consensus 28 ~~VGg~-~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~-~~hsV~~v~~~~Y~----~C~~~~~~----~~~~~G-~ 96 (321)
..+|++ .++.+.|. ..++++||+|.|.... ..|++...+.+.++ .|.....+ .....| .
T Consensus 3 V~~g~~~~~~~F~P~----------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~ 72 (102)
T 1kdj_A 3 VEVGDEVGNFKFYPD----------SITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPS 72 (102)
T ss_dssp EEESCTTCCCCEESS----------EEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCE
T ss_pred EEEecCCCccEEeCC----------EEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCE
Confidence 456753 45666542 4689999999998764 47999876433321 11111111 112334 3
Q ss_pred cEEEecccccEEEEecCccccccCceeEEEec
Q 020799 97 AEFSLEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 97 ~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
.+++++++|.|+|+|. .||++||+..|.|.
T Consensus 73 ~~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 73 FKAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 5788899999999999 89999999999884
No 41
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.49 E-value=1.3e-07 Score=73.72 Aligned_cols=90 Identities=20% Similarity=0.233 Sum_probs=59.3
Q ss_pred EEEeeC-CCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCC-CccEEEeCcc---cccccCCCCCCCccCCCC-cEEE
Q 020799 27 THVVGG-DLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTG-QQDVASVTKE---AYENCNPASPISRKTTGP-AEFS 100 (321)
Q Consensus 27 ~~~VGg-~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~-~hsV~~v~~~---~Y~~C~~~~~~~~~~~G~-~~v~ 100 (321)
+..+|+ +.++.+.|. ..++++||+|.|..... .|++...+.. +++.+...........|. .+++
T Consensus 3 ~V~m~~~~~~~~F~P~----------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~t 72 (98)
T 2plt_A 3 TVKLGADSGALEFVPK----------TLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVK 72 (98)
T ss_dssp EEEESCTTCCSSEESS----------EEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEecCCCCceEeCC----------EEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEE
Confidence 445664 345776552 46899999999987653 7999865321 122111000001223343 4788
Q ss_pred ecccccEEEEecCccccccCceeEEEec
Q 020799 101 LEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 101 L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
++++|+|.|+|. .||+.||+..|.|.
T Consensus 73 f~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 73 LTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred eCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 899999999999 79999999999884
No 42
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.48 E-value=4.5e-07 Score=75.39 Aligned_cols=73 Identities=16% Similarity=0.157 Sum_probs=54.8
Q ss_pred ccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCCc-ccccCC-CeEEEeecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 170 SFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINSTI-AVFTSS-PVKITLKFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p~-~~~~~G-~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
+..++++||+|.|.+....|+|...+. +...... .....| ..+++++++|.|.|+|. .||..||+-.|+|.
T Consensus 22 ~~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 368999999999999888999986532 2111111 111223 35899999999999997 89999999999998
Q ss_pred CC
Q 020799 248 GT 249 (321)
Q Consensus 248 ~~ 249 (321)
..
T Consensus 95 ~p 96 (124)
T 3ef4_A 95 KP 96 (124)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 43
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.36 E-value=4e-07 Score=71.03 Aligned_cols=76 Identities=13% Similarity=0.191 Sum_probs=51.6
Q ss_pred ccceeEeCCEEEEeecC-CCCcEEEeCccc--cccccCCCCcccccCCC-eEEEeecCeeEEEEcCCCCCCCCCCeEEEE
Q 020799 170 SFYSFFVCDTLVFNFAN-GTQDVAIVPKDV--YETCNINSTIAVFTSSP-VKITLKFPGEYYFTSTYLSHCSLGQRLAIN 245 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~-~~h~V~~V~~~~--y~~C~~~~p~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl~I~ 245 (321)
...++++||+|.|.+.. ..|+|...+... -+..+..........|. .+++++++|+|.|+|. .||.+||+..|.
T Consensus 19 ~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~~~C~--~H~~~gM~G~i~ 96 (98)
T 1pcs_A 19 STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTEPGTYTYYCE--PHRGAGMVGKVV 96 (98)
T ss_dssp SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCSCEEEEEECG--GGTTTTCEEEEE
T ss_pred CEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCCCeEEEEEcC--CccccCCeEEEE
Confidence 35799999999999764 479988654210 00000000011223343 4788899999999999 899999999999
Q ss_pred Ee
Q 020799 246 VT 247 (321)
Q Consensus 246 V~ 247 (321)
|.
T Consensus 97 V~ 98 (98)
T 1pcs_A 97 VE 98 (98)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 44
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.34 E-value=1.1e-06 Score=68.54 Aligned_cols=90 Identities=14% Similarity=0.167 Sum_probs=58.5
Q ss_pred EEEeeCC-CCCcCCCCCCcCcccccCCCeeEeCCEEEEEecC-CCccEEEeCccc--ccccCCCCCCCccCCC-CcEEEe
Q 020799 27 THVVGGD-LGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTT-GQQDVASVTKEA--YENCNPASPISRKTTG-PAEFSL 101 (321)
Q Consensus 27 ~~~VGg~-~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~-~~hsV~~v~~~~--Y~~C~~~~~~~~~~~G-~~~v~L 101 (321)
+..+|.+ .++.+.|. ..++++||++.|.... ..|++...+... -+..+..........| ..++++
T Consensus 4 ~V~~~~~~~~~~F~P~----------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf 73 (98)
T 1pcs_A 4 TVKMGSDSGALVFEPS----------TVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTF 73 (98)
T ss_dssp EEEESCTTSCSSEESS----------EEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEEC
T ss_pred EEEEecCCCccEEeCC----------EEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEc
Confidence 4456643 56776552 4689999999998764 479988753210 0000000000112334 347888
Q ss_pred cccccEEEEecCccccccCceeEEEec
Q 020799 102 EAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 102 ~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
+++|+|.|+|. .||..||+..|.|.
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 99999999999 79999999999884
No 45
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.96 E-value=4.6e-06 Score=65.62 Aligned_cols=67 Identities=15% Similarity=0.152 Sum_probs=46.2
Q ss_pred ccceeEeCCEEEEeecCC---CCcEEEeCccccccccCCCCcccccCCC---eEEEeecCeeEEEEcCCCCCCCCCCeEE
Q 020799 170 SFYSFFVCDTLVFNFANG---TQDVAIVPKDVYETCNINSTIAVFTSSP---VKITLKFPGEYYFTSTYLSHCSLGQRLA 243 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~---~h~V~~V~~~~y~~C~~~~p~~~~~~G~---~~v~L~~~G~~yFic~~~~HC~~GmKl~ 243 (321)
+..++++||+|.|.+.+. .|++..-... . ......|. ..++.+++|.|.|+|. .||..||+..
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~-~--------~~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~ 96 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLG-I--------DVVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGK 96 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGT-E--------EEEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCC-c--------ceeecCCcceeEEEecccCceEEEECc--cccCCCCEEE
Confidence 468999999999987532 3666532111 0 01122232 3566789999999996 6999999999
Q ss_pred EEEe
Q 020799 244 INVT 247 (321)
Q Consensus 244 I~V~ 247 (321)
|.|.
T Consensus 97 i~Ve 100 (100)
T 4hci_A 97 VIVK 100 (100)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 46
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.92 E-value=5.3e-05 Score=63.09 Aligned_cols=92 Identities=14% Similarity=0.160 Sum_probs=58.2
Q ss_pred eeeeecCccccccCCCCCcccccccccceeEeC-CEEEEeecC-C-------CCcEEEeCccc----------------c
Q 020799 145 VNYTVGGNIGWAIPPGGALFYASWASFYSFFVC-DTLVFNFAN-G-------TQDVAIVPKDV----------------Y 199 (321)
Q Consensus 145 ~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~vG-D~LvF~y~~-~-------~h~V~~V~~~~----------------y 199 (321)
.++.|+......+.+ +..+++.| |.+.|.+.+ + .|+++..+.++ |
T Consensus 3 ~~v~i~~~d~m~F~p----------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~ 72 (129)
T 1cuo_A 3 CETTVTSGDTMTYST----------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNF 72 (129)
T ss_dssp CEEEEEECSSSCCSC----------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTT
T ss_pred EEEEEEeCCCceEcc----------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccc
Confidence 345565544555543 35788999 977777643 3 39998876442 2
Q ss_pred ccccCCCC---cccccCCCe-EEEee-----cCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 200 ETCNINST---IAVFTSSPV-KITLK-----FPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 200 ~~C~~~~p---~~~~~~G~~-~v~L~-----~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
..=+..+- ......|.+ .++++ ++|+|+|+|.+++|=+ |||-.|+|.
T Consensus 73 v~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 73 VTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp SCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred cccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 11011110 122344543 44444 8999999999999999 899999985
No 47
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.85 E-value=3.7e-05 Score=63.27 Aligned_cols=69 Identities=20% Similarity=0.242 Sum_probs=50.1
Q ss_pred CCeeEeCCEEEEEecCCCccEEEeCcccccccCCCCC--CCccCCCCcEEEecccccEEEEecCccccccCceeEEEecC
Q 020799 52 MQTFSVGDILLFNFTTGQQDVASVTKEAYENCNPASP--ISRKTTGPAEFSLEAAGDYYFICTLELHCTLGQKLAIHVTG 129 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~~hsV~~v~~~~Y~~C~~~~~--~~~~~~G~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~~ 129 (321)
..++++||+|.|......|+|...+ .+-.... ...-.+...+++++++|.|.|+|.. |+. |+..|.|..
T Consensus 22 ~i~V~~GdtV~f~n~d~~H~v~~~~-----~~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTDKGHNVETIK-----GMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEECTTEEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCcEEEEcc-----cccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 4689999999999877789998753 1111111 1111122358889999999999997 887 999999985
No 48
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.82 E-value=4e-05 Score=66.73 Aligned_cols=92 Identities=13% Similarity=0.184 Sum_probs=58.3
Q ss_pred eeeeecCccccccCCCCCccccccccccee-EeCCEEEEeec--CC------CCcEEEeCccccc---------------
Q 020799 145 VNYTVGGNIGWAIPPGGALFYASWASFYSF-FVCDTLVFNFA--NG------TQDVAIVPKDVYE--------------- 200 (321)
Q Consensus 145 ~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F-~vGD~LvF~y~--~~------~h~V~~V~~~~y~--------------- 200 (321)
.++.|+..+++.+.+ +..++ +.||+|.|.+. .. .|+++..+.++++
T Consensus 43 ~~V~I~~~d~m~F~P----------~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v 112 (167)
T 3ay2_A 43 CAATVESNDNMQFNT----------KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYV 112 (167)
T ss_dssp CEEEEEECTTSCBSC----------SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTS
T ss_pred eEEEEEeCCCceEec----------ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccc
Confidence 456676555666544 34666 67997666664 23 2999887654322
Q ss_pred cccCCCC---cccccCCCe-EEEee----cCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 201 TCNINST---IAVFTSSPV-KITLK----FPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 201 ~C~~~~p---~~~~~~G~~-~v~L~----~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
.=+..+- ......|.+ .|+++ ++|.|+|+|.+++|=+ |||..|+|.
T Consensus 113 ~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 113 KPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 1001110 122344543 56665 7999999999999999 999999986
No 49
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=97.81 E-value=4.5e-05 Score=59.65 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=49.8
Q ss_pred ccceeEeCCEEEEeecC-CCCcEEEeCcccccccc-------CCCCcccccCCC-eEEEe---ecCeeEEEEcCCCCCCC
Q 020799 170 SFYSFFVCDTLVFNFAN-GTQDVAIVPKDVYETCN-------INSTIAVFTSSP-VKITL---KFPGEYYFTSTYLSHCS 237 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~-~~h~V~~V~~~~y~~C~-------~~~p~~~~~~G~-~~v~L---~~~G~~yFic~~~~HC~ 237 (321)
...++++||+|.|.... ..|++..-... ..+. ..........|. .++++ +++|+|+|.|. .|+.
T Consensus 19 ~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~--~H~~ 94 (105)
T 3cvb_A 19 ANVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA--PHRG 94 (105)
T ss_dssp SEEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--TTGG
T ss_pred CEEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--Cchh
Confidence 35789999999998653 47998764321 1110 000001223343 36777 79999999999 8999
Q ss_pred CCCeEEEEEe
Q 020799 238 LGQRLAINVT 247 (321)
Q Consensus 238 ~GmKl~I~V~ 247 (321)
.||+..|.|.
T Consensus 95 ~GM~G~i~V~ 104 (105)
T 3cvb_A 95 AGMVGKITVE 104 (105)
T ss_dssp GTCEEEEEEC
T ss_pred cCCEEEEEEc
Confidence 9999999985
No 50
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.81 E-value=4.9e-05 Score=63.15 Aligned_cols=66 Identities=18% Similarity=0.230 Sum_probs=47.1
Q ss_pred CCeeEeCCEEEEEecCC-CccEEEeCccc----ccccCCCCCCCccCCCC-cEEEecccccEEEEecCccccccCceeEE
Q 020799 52 MQTFSVGDILLFNFTTG-QQDVASVTKEA----YENCNPASPISRKTTGP-AEFSLEAAGDYYFICTLELHCTLGQKLAI 125 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~-~hsV~~v~~~~----Y~~C~~~~~~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl~I 125 (321)
..++++||+|.|..... .|+|...+... |+. .....|. .+++++++|.|.|+|+. |. ||+..|
T Consensus 61 ~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g~~~~~s-------~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~I 129 (132)
T 3c75_A 61 EVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGKV 129 (132)
T ss_dssp EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEEE
T ss_pred EEEECCCCEEEEEECCCCceEEEEeCCCCCcccccc-------cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEEE
Confidence 56899999999986543 69998753221 110 1122333 47888999999999997 76 999999
Q ss_pred Eec
Q 020799 126 HVT 128 (321)
Q Consensus 126 ~V~ 128 (321)
.|.
T Consensus 130 ~V~ 132 (132)
T 3c75_A 130 IVE 132 (132)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 51
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=97.80 E-value=5.6e-05 Score=59.10 Aligned_cols=88 Identities=22% Similarity=0.225 Sum_probs=56.8
Q ss_pred EEEeeCC-CCCcCCCCCCcCcccccCCCeeEeCCEEEEEecC-CCccEEEeCcccccccC-------CCCCCCccCCCC-
Q 020799 27 THVVGGD-LGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTT-GQQDVASVTKEAYENCN-------PASPISRKTTGP- 96 (321)
Q Consensus 27 ~~~VGg~-~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~-~~hsV~~v~~~~Y~~C~-------~~~~~~~~~~G~- 96 (321)
+..+|.+ .+..+.+. ..+++.||+|.|.... ..|++..-... ..+. ..........|.
T Consensus 4 ~V~~~~~~~~~~f~p~----------~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~~~i~pG~~ 71 (105)
T 3cvb_A 4 TVKMGADSGLFQFEPA----------NVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQLMFSPGES 71 (105)
T ss_dssp EEEESCTTCCSCEESS----------EEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEEEECSTTCE
T ss_pred EEEEeecCCccEEeCC----------EEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccccccCCCCe
Confidence 4556643 56776542 4689999999997653 47998764321 1110 000001122333
Q ss_pred cEEEe---cccccEEEEecCccccccCceeEEEec
Q 020799 97 AEFSL---EAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 97 ~~v~L---~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
.++++ +++|+|+|.|. .|+..||+..|.|.
T Consensus 72 ~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 72 YEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 46677 78999999999 69999999999985
No 52
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.78 E-value=5.7e-05 Score=65.76 Aligned_cols=92 Identities=15% Similarity=0.184 Sum_probs=58.2
Q ss_pred eEEEeeCCCCCcCCCCCCcCcccccCCCee-EeCCEEEEEecC--C------CccEEEeCccccc---------------
Q 020799 26 TTHVVGGDLGWQIPPGGAIAYVTWASMQTF-SVGDILLFNFTT--G------QQDVASVTKEAYE--------------- 81 (321)
Q Consensus 26 ~~~~VGg~~GW~~~~~~~~~Y~~Was~~~F-~vGD~LvF~y~~--~------~hsV~~v~~~~Y~--------------- 81 (321)
.++.|+.++++.|.+. ..++ +.||++.|.+.+ . .|+++..+..+++
T Consensus 43 ~~V~I~~~d~m~F~P~----------~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v 112 (167)
T 3ay2_A 43 CAATVESNDNMQFNTK----------DIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYV 112 (167)
T ss_dssp CEEEEEECTTSCBSCS----------EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTS
T ss_pred eEEEEEeCCCceEecc----------eEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccc
Confidence 4566776667887653 3466 679976665543 2 3999877544322
Q ss_pred ccCCCCC---CCccCCCC-cEEEec----ccccEEEEecCccccccCceeEEEec
Q 020799 82 NCNPASP---ISRKTTGP-AEFSLE----AAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 82 ~C~~~~~---~~~~~~G~-~~v~L~----~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
.=+..+. ......|. ..|+++ ++|.|+|+|++++|=+ |||-.|.|.
T Consensus 113 ~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 113 KPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 1011110 11233443 355554 7899999999999998 999999985
No 53
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.76 E-value=0.00017 Score=60.02 Aligned_cols=91 Identities=9% Similarity=0.107 Sum_probs=57.6
Q ss_pred EEEeeCCCCCcCCCCCCcCcccccCCCeeEeC-CEEEEEecCC--------CccEEEeCccc----------------cc
Q 020799 27 THVVGGDLGWQIPPGGAIAYVTWASMQTFSVG-DILLFNFTTG--------QQDVASVTKEA----------------YE 81 (321)
Q Consensus 27 ~~~VGg~~GW~~~~~~~~~Y~~Was~~~F~vG-D~LvF~y~~~--------~hsV~~v~~~~----------------Y~ 81 (321)
+..|+..+.+.+.+. ..+++.| |.+.|.+.+. .|+++..+..+ |.
T Consensus 4 ~v~i~~~d~m~F~p~----------~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v 73 (129)
T 1cuo_A 4 ETTVTSGDTMTYSTR----------SISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFV 73 (129)
T ss_dssp EEEEEECSSSCCSCS----------EEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTS
T ss_pred EEEEEeCCCceEccC----------eEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccc
Confidence 445665556777653 4688999 9766666432 39998875442 21
Q ss_pred ccCCCCCC---CccCCCC-cEEEe--c---ccccEEEEecCccccccCceeEEEec
Q 020799 82 NCNPASPI---SRKTTGP-AEFSL--E---AAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 82 ~C~~~~~~---~~~~~G~-~~v~L--~---~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
.=+..+.+ .....|. ..+++ + ++|.|+|+|++++|=+ |||-.|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 74 TPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 11111111 1233443 24444 3 7899999999999999 999999985
No 54
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.70 E-value=1.6e-05 Score=62.52 Aligned_cols=66 Identities=15% Similarity=0.241 Sum_probs=45.3
Q ss_pred CCeeEeCCEEEEEecCC---CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecCccccccCceeEE
Q 020799 52 MQTFSVGDILLFNFTTG---QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLELHCTLGQKLAI 125 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~---~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~~HC~~GmKl~I 125 (321)
..++++||++.|.+.+. .|++..-.. ..+ .....|. ..|+.+++|.|.|+|. .||..||+-.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~-~~~--------~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i 97 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKL-GID--------VVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGKV 97 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGG-TEE--------EEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecC-Ccc--------eeecCCcceeEEEecccCceEEEECc--cccCCCCEEEE
Confidence 57899999999987543 366654211 110 1122232 3566789999999997 59999999999
Q ss_pred Eec
Q 020799 126 HVT 128 (321)
Q Consensus 126 ~V~ 128 (321)
.|.
T Consensus 98 ~Ve 100 (100)
T 4hci_A 98 IVK 100 (100)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 55
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.68 E-value=0.0001 Score=58.73 Aligned_cols=67 Identities=19% Similarity=0.154 Sum_probs=48.0
Q ss_pred ccceeEeCCEEEEeecCC-CCcEEEeCccc----cccccCCCCcccccCCC-eEEEeecCeeEEEEcCCCCCCCCCCeEE
Q 020799 170 SFYSFFVCDTLVFNFANG-TQDVAIVPKDV----YETCNINSTIAVFTSSP-VKITLKFPGEYYFTSTYLSHCSLGQRLA 243 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~-~h~V~~V~~~~----y~~C~~~~p~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl~ 243 (321)
+..++++||+|.|..... .|+|...+... |++ ..+..|. .+++++++|.|.|+|.. |. ||+..
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~~~~~~~s-------~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~ 102 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 102 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCCCcccccc-------cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 357899999999996543 69987654220 111 1233343 47888999999999997 77 99999
Q ss_pred EEEe
Q 020799 244 INVT 247 (321)
Q Consensus 244 I~V~ 247 (321)
|.|.
T Consensus 103 I~V~ 106 (106)
T 1id2_A 103 VIVE 106 (106)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 56
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.67 E-value=0.0001 Score=60.54 Aligned_cols=70 Identities=19% Similarity=0.110 Sum_probs=50.3
Q ss_pred ccceeEeCCEEEEeecCCCCcEEEeCccccccccCCCCcc-cccCC-CeEEEeecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 170 SFYSFFVCDTLVFNFANGTQDVAIVPKDVYETCNINSTIA-VFTSS-PVKITLKFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~~h~V~~V~~~~y~~C~~~~p~~-~~~~G-~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
...++++||+|.|......|+|...+. +-...... ....| ..+++++++|.|.|+|.. |+. |+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~ 91 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVG 91 (122)
T ss_dssp SEEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEe
Confidence 357899999999999877899987541 11111000 01123 357899999999999997 887 99999997
Q ss_pred C
Q 020799 248 G 248 (321)
Q Consensus 248 ~ 248 (321)
.
T Consensus 92 ~ 92 (122)
T 2ux6_A 92 D 92 (122)
T ss_dssp S
T ss_pred C
Confidence 5
No 57
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.66 E-value=9.6e-05 Score=58.58 Aligned_cols=67 Identities=18% Similarity=0.153 Sum_probs=47.5
Q ss_pred ccceeEeCCEEEEeecCC-CCcEEEeCccc----cccccCCCCcccccCCC-eEEEeecCeeEEEEcCCCCCCCCCCeEE
Q 020799 170 SFYSFFVCDTLVFNFANG-TQDVAIVPKDV----YETCNINSTIAVFTSSP-VKITLKFPGEYYFTSTYLSHCSLGQRLA 243 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~-~h~V~~V~~~~----y~~C~~~~p~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl~ 243 (321)
...++++||+|.|..... .|+|...+..+ ++.. .+..|. .+++++++|+|+|.|.. |- ||+..
T Consensus 33 ~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~~tf~~~G~y~y~C~~--H~--gM~G~ 101 (105)
T 2ov0_A 33 PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYSLTFTEAGTYDYHCTP--HP--FMRGK 101 (105)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 357999999999986644 79988653221 2221 122343 46888999999999997 54 99999
Q ss_pred EEEe
Q 020799 244 INVT 247 (321)
Q Consensus 244 I~V~ 247 (321)
|.|.
T Consensus 102 i~V~ 105 (105)
T 2ov0_A 102 VVVE 105 (105)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 58
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.55 E-value=0.00013 Score=57.76 Aligned_cols=82 Identities=17% Similarity=0.147 Sum_probs=54.7
Q ss_pred ceEEEeeCCCCCcCCCCCCcCcccccCCCeeEeCCEEEEEecCC-CccEEEeCccc----ccccCCCCCCCccCCC-CcE
Q 020799 25 ETTHVVGGDLGWQIPPGGAIAYVTWASMQTFSVGDILLFNFTTG-QQDVASVTKEA----YENCNPASPISRKTTG-PAE 98 (321)
Q Consensus 25 a~~~~VGg~~GW~~~~~~~~~Y~~Was~~~F~vGD~LvF~y~~~-~hsV~~v~~~~----Y~~C~~~~~~~~~~~G-~~~ 98 (321)
+.++.|.- .+|.+.|. ..++++||+|.|..... .|+|...+..+ ++.. ....| ..+
T Consensus 18 a~~~~V~~-~~~~F~P~----------~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~ 79 (105)
T 2ov0_A 18 DGAIVVDI-AKMKYETP----------ELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYS 79 (105)
T ss_dssp TTCEEEEE-ETTEESSS----------EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEE
T ss_pred CcCEEEEE-eecEEcCC----------EEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEE
Confidence 34455542 35777553 56899999999986544 79988643210 2211 12233 347
Q ss_pred EEecccccEEEEecCccccccCceeEEEec
Q 020799 99 FSLEAAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 99 v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
++++++|+|+|.|.. |- ||+..|.|.
T Consensus 80 ~tf~~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 80 LTFTEAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp EEECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred EEeCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 888999999999998 54 999999884
No 59
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.54 E-value=5.7e-05 Score=66.37 Aligned_cols=80 Identities=21% Similarity=0.292 Sum_probs=52.2
Q ss_pred eEeCCEEEEE---ecC------CCccEEEeCcccccccCCCCCC---CccCC--CCcEEEec-------------ccc-c
Q 020799 55 FSVGDILLFN---FTT------GQQDVASVTKEAYENCNPASPI---SRKTT--GPAEFSLE-------------AAG-D 106 (321)
Q Consensus 55 F~vGD~LvF~---y~~------~~hsV~~v~~~~Y~~C~~~~~~---~~~~~--G~~~v~L~-------------~~G-~ 106 (321)
.++||.|-|- |+. ..+.+++|++++|+.|+..... ..-+. +...|++. ++| .
T Consensus 26 v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~~ 105 (178)
T 1iko_P 26 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKD 105 (178)
T ss_dssp CCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 4669999874 542 2478999999999999886321 11122 22333332 356 7
Q ss_pred EEEEecCc-----------ccccc-CceeEEEecCCCCCC
Q 020799 107 YYFICTLE-----------LHCTL-GQKLAIHVTGPAPQP 134 (321)
Q Consensus 107 ~yFic~~~-----------~HC~~-GmKl~I~V~~~~p~p 134 (321)
|||||+-. ++|.. +|||.|.|...+..+
T Consensus 106 YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~~ 145 (178)
T 1iko_P 106 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASSA 145 (178)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC----
T ss_pred eEEEecCCcccccccccCCCccccceeEEEEEeecCCCCC
Confidence 99999863 79974 999999998755443
No 60
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.53 E-value=0.00013 Score=60.73 Aligned_cols=92 Identities=14% Similarity=0.197 Sum_probs=56.6
Q ss_pred eeeeecCccccccCCCCCccccccccccee-EeCCEEEEeecC--C------CCcEEEeCccccc---------------
Q 020799 145 VNYTVGGNIGWAIPPGGALFYASWASFYSF-FVCDTLVFNFAN--G------TQDVAIVPKDVYE--------------- 200 (321)
Q Consensus 145 ~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F-~vGD~LvF~y~~--~------~h~V~~V~~~~y~--------------- 200 (321)
.++.|+.+.++.+.+ +..++ +.||++.|.+.+ . .|+++..+.++.+
T Consensus 3 ~~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~ 72 (128)
T 1nwp_A 3 CKVTVDSTDQMSFNT----------KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQY 72 (128)
T ss_dssp CEEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTT
T ss_pred EEEEEEeCCCccEec----------CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccc
Confidence 355666555566644 34667 779987777743 2 2999876543221
Q ss_pred -cccCCCC---cccccCCCe-EEEee----cCee-EEEEcCCCCCCCCCCeEEEEEe
Q 020799 201 -TCNINST---IAVFTSSPV-KITLK----FPGE-YYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 201 -~C~~~~p---~~~~~~G~~-~v~L~----~~G~-~yFic~~~~HC~~GmKl~I~V~ 247 (321)
.=+..+- ...+..|.+ .++++ ++|. |.|+|.+++|=+ |||-.|+|.
T Consensus 73 ~~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 73 LKDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp SCTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred cccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 1000110 112444543 55555 5676 999999999999 999999883
No 61
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.53 E-value=0.00056 Score=56.80 Aligned_cols=91 Identities=18% Similarity=0.304 Sum_probs=54.8
Q ss_pred eeeecCccccccCCCCCccccccccccee-EeCCEEEEeecC-C-------CCcEEEeCccc----------------cc
Q 020799 146 NYTVGGNIGWAIPPGGALFYASWASFYSF-FVCDTLVFNFAN-G-------TQDVAIVPKDV----------------YE 200 (321)
Q Consensus 146 ~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F-~vGD~LvF~y~~-~-------~h~V~~V~~~~----------------y~ 200 (321)
++.|....++.+.+ +..++ +.||++.|.+.+ + .|+++..+.++ |.
T Consensus 3 ~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~ 72 (128)
T 2iaa_C 3 DVSIEGNDSMQFNT----------KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYV 72 (128)
T ss_dssp EEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEeCCCceEec----------CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhcccccccc
Confidence 34555555566543 23455 559977777643 2 39998765432 21
Q ss_pred cccCCCC---cccccCCCe-EEEee----cCe-eEEEEcCCCCCCCCCCeEEEEEe
Q 020799 201 TCNINST---IAVFTSSPV-KITLK----FPG-EYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 201 ~C~~~~p---~~~~~~G~~-~v~L~----~~G-~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
.=+..+- ...+..|.+ .++++ ++| .|.|+|.+++|=+ |||-.|+|.
T Consensus 73 ~~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 73 KAGDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccccchhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 1011110 122344543 55555 678 5999999999999 999999985
No 62
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.50 E-value=0.00013 Score=60.73 Aligned_cols=91 Identities=14% Similarity=0.188 Sum_probs=56.3
Q ss_pred EEEeeCCCCCcCCCCCCcCcccccCCCee-EeCCEEEEEecCC--------CccEEEeCccccc----------------
Q 020799 27 THVVGGDLGWQIPPGGAIAYVTWASMQTF-SVGDILLFNFTTG--------QQDVASVTKEAYE---------------- 81 (321)
Q Consensus 27 ~~~VGg~~GW~~~~~~~~~Y~~Was~~~F-~vGD~LvF~y~~~--------~hsV~~v~~~~Y~---------------- 81 (321)
+..|+.++++.+.+. ..++ +.||++.|.+.+. .|+++..+..+.+
T Consensus 4 ~v~v~~~d~m~F~p~----------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~ 73 (128)
T 1nwp_A 4 KVTVDSTDQMSFNTK----------DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYL 73 (128)
T ss_dssp EEEEEECTTSCBSCS----------EEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTS
T ss_pred EEEEEeCCCccEecC----------EEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccc
Confidence 455665567888653 3466 7799776666432 3999876543221
Q ss_pred ccCCCCCC---CccCCCC-cEEEec----cccc-EEEEecCccccccCceeEEEec
Q 020799 82 NCNPASPI---SRKTTGP-AEFSLE----AAGD-YYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 82 ~C~~~~~~---~~~~~G~-~~v~L~----~~G~-~yFic~~~~HC~~GmKl~I~V~ 128 (321)
.=+..+-+ .....|. .+++++ ++|. |.|+|++++|=+ |||-.|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 74 KDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 10100101 1234443 355554 4676 999999999999 999999883
No 63
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.50 E-value=0.00022 Score=59.13 Aligned_cols=67 Identities=19% Similarity=0.137 Sum_probs=48.2
Q ss_pred ccceeEeCCEEEEeecCC-CCcEEEeCccc----cccccCCCCcccccCCC-eEEEeecCeeEEEEcCCCCCCCCCCeEE
Q 020799 170 SFYSFFVCDTLVFNFANG-TQDVAIVPKDV----YETCNINSTIAVFTSSP-VKITLKFPGEYYFTSTYLSHCSLGQRLA 243 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~-~h~V~~V~~~~----y~~C~~~~p~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl~ 243 (321)
+..++++||+|.|..... .|+|...+..+ |+ ...+..|. .+++++++|+|.|+|.. |. ||+..
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g~~~~~-------s~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~ 128 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFR-------GEMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 128 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEE-------CCCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCCccccc-------ccccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEE
Confidence 357899999999986543 69998654321 11 01223343 46888999999999997 76 99999
Q ss_pred EEEe
Q 020799 244 INVT 247 (321)
Q Consensus 244 I~V~ 247 (321)
|.|.
T Consensus 129 I~V~ 132 (132)
T 3c75_A 129 VIVE 132 (132)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9884
No 64
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.49 E-value=0.00036 Score=58.01 Aligned_cols=92 Identities=12% Similarity=0.191 Sum_probs=54.3
Q ss_pred eeeeecCccccccCCCCCccccccccccee-EeCCEEEEeecC--C------CCcEEEeCccc----------------c
Q 020799 145 VNYTVGGNIGWAIPPGGALFYASWASFYSF-FVCDTLVFNFAN--G------TQDVAIVPKDV----------------Y 199 (321)
Q Consensus 145 ~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F-~vGD~LvF~y~~--~------~h~V~~V~~~~----------------y 199 (321)
.++.|+.+.+..+.+ +..++ +.||++.|.+.+ . .|+++..+.++ |
T Consensus 3 ~~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~ 72 (129)
T 2ccw_A 3 CEATVESNDAMQYNV----------KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDY 72 (129)
T ss_dssp SEEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTT
T ss_pred EEEEEEeCCCccEec----------ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccc
Confidence 345565554555543 23444 559977666643 2 39999876442 2
Q ss_pred ccccCCCC---cccccCCCe-EEEee----cCee-EEEEcCCCCCCCCCCeEEEEEe
Q 020799 200 ETCNINST---IAVFTSSPV-KITLK----FPGE-YYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 200 ~~C~~~~p---~~~~~~G~~-~v~L~----~~G~-~yFic~~~~HC~~GmKl~I~V~ 247 (321)
..=+..+- ......|.+ .++++ ++|. |+|+|.+++|=+ |||-.|+|.
T Consensus 73 ~~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 73 VKAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp SCTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred cccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 11011110 112344543 45554 5665 999999999999 999999985
No 65
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.46 E-value=0.00061 Score=56.61 Aligned_cols=91 Identities=13% Similarity=0.187 Sum_probs=54.2
Q ss_pred EEEeeCCCCCcCCCCCCcCcccccCCCee-EeCCEEEEEecCC--------CccEEEeCccc----------------cc
Q 020799 27 THVVGGDLGWQIPPGGAIAYVTWASMQTF-SVGDILLFNFTTG--------QQDVASVTKEA----------------YE 81 (321)
Q Consensus 27 ~~~VGg~~GW~~~~~~~~~Y~~Was~~~F-~vGD~LvF~y~~~--------~hsV~~v~~~~----------------Y~ 81 (321)
+..|+.+++..+.+. ..++ +.||++.|.+.+. .|+++..+..+ |.
T Consensus 4 ~v~v~~~d~m~F~p~----------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~ 73 (129)
T 2ccw_A 4 EATVESNDAMQYNVK----------EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYV 73 (129)
T ss_dssp EEEEEECTTSCBSCS----------EEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEeCCCccEecc----------eEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccc
Confidence 455665566777652 2344 4499766666432 39998775432 21
Q ss_pred ccCCCCCC---CccCCCC-cEEEec----cccc-EEEEecCccccccCceeEEEec
Q 020799 82 NCNPASPI---SRKTTGP-AEFSLE----AAGD-YYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 82 ~C~~~~~~---~~~~~G~-~~v~L~----~~G~-~yFic~~~~HC~~GmKl~I~V~ 128 (321)
.=+..+-+ .....|. ..++++ ++|. |+|+|++++|=+ |||-.|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 74 KAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 11111101 1233443 345544 5665 999999999999 999999985
No 66
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.41 E-value=0.00035 Score=55.55 Aligned_cols=66 Identities=18% Similarity=0.230 Sum_probs=47.0
Q ss_pred CCeeEeCCEEEEEecCC-CccEEEeCccc----ccccCCCCCCCccCCCC-cEEEecccccEEEEecCccccccCceeEE
Q 020799 52 MQTFSVGDILLFNFTTG-QQDVASVTKEA----YENCNPASPISRKTTGP-AEFSLEAAGDYYFICTLELHCTLGQKLAI 125 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~-~hsV~~v~~~~----Y~~C~~~~~~~~~~~G~-~~v~L~~~G~~yFic~~~~HC~~GmKl~I 125 (321)
..++++||+|.|..... .|+|...+... |+. ..+..|. .+++++++|.|.|+|.. |. ||+..|
T Consensus 35 ~i~V~~G~tV~~~N~d~~~H~v~~~~~~~~~~~~~s-------~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~I 103 (106)
T 1id2_A 35 EVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGKV 103 (106)
T ss_dssp EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCCCCCcccccc-------cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEEE
Confidence 56899999999986543 69987653220 110 1122333 47888999999999998 77 999999
Q ss_pred Eec
Q 020799 126 HVT 128 (321)
Q Consensus 126 ~V~ 128 (321)
.|.
T Consensus 104 ~V~ 106 (106)
T 1id2_A 104 IVE 106 (106)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 67
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.37 E-value=0.00047 Score=57.23 Aligned_cols=90 Identities=18% Similarity=0.238 Sum_probs=54.8
Q ss_pred EEeeCCCCCcCCCCCCcCcccccCCCee-EeCCEEEEEecCC--------CccEEEeCccc----------------ccc
Q 020799 28 HVVGGDLGWQIPPGGAIAYVTWASMQTF-SVGDILLFNFTTG--------QQDVASVTKEA----------------YEN 82 (321)
Q Consensus 28 ~~VGg~~GW~~~~~~~~~Y~~Was~~~F-~vGD~LvF~y~~~--------~hsV~~v~~~~----------------Y~~ 82 (321)
..|+..+++.+.+. ..++ +.||++.|.+.+. .|+++..+.++ |..
T Consensus 4 v~v~~~d~m~F~p~----------~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~ 73 (128)
T 2iaa_C 4 VSIEGNDSMQFNTK----------SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVK 73 (128)
T ss_dssp EEEEECTTSCBSCS----------EEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSC
T ss_pred EEEEeCCCceEecC----------EEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccc
Confidence 44555567887652 2344 5599766666432 39998765332 211
Q ss_pred cCCCCC---CCccCCCC-cEEEec----ccc-cEEEEecCccccccCceeEEEec
Q 020799 83 CNPASP---ISRKTTGP-AEFSLE----AAG-DYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 83 C~~~~~---~~~~~~G~-~~v~L~----~~G-~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
=+..+- ......|. ..++++ ++| .|.|+|++++|=+ |||-.|+|.
T Consensus 74 ~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 74 AGDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCTTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cccchhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 111110 11234443 355554 678 4999999999999 999999985
No 68
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=97.33 E-value=0.0084 Score=56.43 Aligned_cols=189 Identities=16% Similarity=0.222 Sum_probs=102.2
Q ss_pred CeeEeCCEEEEEecCC-----CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecCc----cccccC
Q 020799 53 QTFSVGDILLFNFTTG-----QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLE----LHCTLG 120 (321)
Q Consensus 53 ~~F~vGD~LvF~y~~~-----~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~----~HC~~G 120 (321)
.+++.||+|.+++.+. .|++..=.....+. ...+.....|. ..|+++++|++||-|... .|=..|
T Consensus 67 i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~~---~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~G 143 (336)
T 1oe1_A 67 LVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALG---GAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSG 143 (336)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEcCCCCCccccceECCCCCCCC---CcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCC
Confidence 4678999999888653 46665421111000 01111233343 366778899999999975 366789
Q ss_pred ceeEEEecCCCCCCCCCCCCCCCceeeeecCccccccCC---------------------------------CCCc-ccc
Q 020799 121 QKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGWAIPP---------------------------------GGAL-FYA 166 (321)
Q Consensus 121 mKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW~~~~---------------------------------~~~~-~Y~ 166 (321)
|.-.|.|......+-+-+.|..-..++.+.- ..|.... |+.. .|+
T Consensus 144 l~G~liV~~~~~~~~~~~~~~~~D~e~~l~~-~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~ 222 (336)
T 1oe1_A 144 MSGTLMVLPRDGLKDPQGKPLHYDRAYTIGE-FDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT 222 (336)
T ss_dssp CEEEEEEECTTCCBCTTSCBCCCSEEEEEEE-EEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS
T ss_pred CeEEEEEecCcCCcccccCcccCCceeEeee-eeeeeccccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCC
Confidence 9999999754322111111112223343321 1132210 0000 011
Q ss_pred cccccceeEeCCEEEEeecCC----------CCcEEEeCccccccccCCCC-c---cc--ccCC---CeEEEeecCeeEE
Q 020799 167 SWASFYSFFVCDTLVFNFANG----------TQDVAIVPKDVYETCNINST-I---AV--FTSS---PVKITLKFPGEYY 227 (321)
Q Consensus 167 ~Wa~~~~F~vGD~LvF~y~~~----------~h~V~~V~~~~y~~C~~~~p-~---~~--~~~G---~~~v~L~~~G~~y 227 (321)
.| ...+++.|+++.|..... .|....+. +. ....+ . .+ ...| ...|+.+++|.|+
T Consensus 223 ~~-~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~-DG----~~~~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~ 296 (336)
T 1oe1_A 223 GA-NALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE-TG----KFANPPQRDLETWFIRGGSAGAALYTFKQPGVYA 296 (336)
T ss_dssp GG-GCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET-TC----CTTSCCEEEESBCCBCTTEEEEEEEECCSCEEEE
T ss_pred CC-cceEcCCCCEEEEEecCCCCccceEEECCcCceEeC-CC----cCcCCccccceEEEECCCCcEEEEEEcCCCceEE
Confidence 11 346788899888754321 12222221 11 11111 1 11 1223 2367778999999
Q ss_pred EEcCCCCCC-CCCCeEEEEEeCCCC
Q 020799 228 FTSTYLSHC-SLGQRLAINVTGTST 251 (321)
Q Consensus 228 Fic~~~~HC-~~GmKl~I~V~~~~~ 251 (321)
|.|....|+ .+||...|.|.....
T Consensus 297 ~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 297 YLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEechhhccccCCCeEEEEECCCCC
Confidence 999998898 999999999987554
No 69
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=97.30 E-value=0.0017 Score=63.37 Aligned_cols=181 Identities=16% Similarity=0.197 Sum_probs=101.7
Q ss_pred CCCeeEeCCEEEEEecCC---CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecCccccccCceeE
Q 020799 51 SMQTFSVGDILLFNFTTG---QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLELHCTLGQKLA 124 (321)
Q Consensus 51 s~~~F~vGD~LvF~y~~~---~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~~HC~~GmKl~ 124 (321)
...+++.||+|.|++.+. .|++..-....-..|. ...|. .+|+++++|+++|.|.+.+|=..||+..
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~-------i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~ 127 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV-------NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGN 127 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB-------CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee-------cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEE
Confidence 357899999999988643 3776532222222232 22232 3566688999999999999999999999
Q ss_pred EEecCCCCCCCC----------CCCCC----CCce--eeee----------cC--ccccccCCCCCcccccccccceeEe
Q 020799 125 IHVTGPAPQPSP----------GPSLP----RTPV--NYTV----------GG--NIGWAIPPGGALFYASWASFYSFFV 176 (321)
Q Consensus 125 I~V~~~~p~p~p----------~~~p~----ssa~--~~~V----------Gg--~~gW~~~~~~~~~Y~~Wa~~~~F~v 176 (321)
|.|..+...... -+.|. ..+. .+.. +| ..-|.++.. +- ....+++.
T Consensus 128 i~V~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~----~p--gp~i~v~~ 201 (447)
T 2dv6_A 128 IQVLPGNRAEMKSSGADITRDPADLPGPIGPRQAKTVRIDLETVEVKGQLDDNTTYTYWTFNGK----VP--GPFLRVRV 201 (447)
T ss_dssp EEEESSCCCCCCCSSBCCBCCTTCSCCCCCSCCCCEEEEEEEEEEEEEEEETTEEEEEEEETTB----BS--CCCEEEET
T ss_pred EEEeCCccccCCCcchhhccChhhcCCccccCCCcEEEEEEEEEEEEEeccCCceeEEEEECCc----cC--CCeEEecC
Confidence 999875432110 01111 1111 1111 11 112444211 10 13468888
Q ss_pred CCEEEEeecCC-----CCcEEE--eCccccccccCCCCcccccCCC---eEEEeecCeeEEEEcCCC---CCCCCCCeEE
Q 020799 177 CDTLVFNFANG-----TQDVAI--VPKDVYETCNINSTIAVFTSSP---VKITLKFPGEYYFTSTYL---SHCSLGQRLA 243 (321)
Q Consensus 177 GD~LvF~y~~~-----~h~V~~--V~~~~y~~C~~~~p~~~~~~G~---~~v~L~~~G~~yFic~~~---~HC~~GmKl~ 243 (321)
||++++++.+. .|++.. +...|-.. . ......|. ..|+++++|+|||-|... .|=..||.-.
T Consensus 202 G~~v~~rl~N~~~~~~~~~ih~Hg~~~~DG~~----~-~~~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~ 276 (447)
T 2dv6_A 202 GDTVELHLKNHKDSLMVHSVDFHGATGPGGAA----A-FTQTDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGMYGL 276 (447)
T ss_dssp TCEEEEEEEECTTCSSCBCCEETTCCSGGGGG----G-GCCBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHHTTCEEE
T ss_pred CCEEEEEEEeCCCCceeEEEeeccccCCCCCC----c-cEEeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHhCCCEEE
Confidence 99999988643 244432 11111100 0 01123343 256778899999999762 2335799888
Q ss_pred EEEeCC
Q 020799 244 INVTGT 249 (321)
Q Consensus 244 I~V~~~ 249 (321)
|.|...
T Consensus 277 l~v~~~ 282 (447)
T 2dv6_A 277 LLVEPE 282 (447)
T ss_dssp EEEECT
T ss_pred EEEeCC
Confidence 888643
No 70
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.29 E-value=9e-05 Score=65.10 Aligned_cols=79 Identities=23% Similarity=0.315 Sum_probs=53.3
Q ss_pred eeEeCCEEEEe---ecC------CCCcEEEeCccccccccCCC-C--cccccC--CCeEEEee-------------cCe-
Q 020799 173 SFFVCDTLVFN---FAN------GTQDVAIVPKDVYETCNINS-T--IAVFTS--SPVKITLK-------------FPG- 224 (321)
Q Consensus 173 ~F~vGD~LvF~---y~~------~~h~V~~V~~~~y~~C~~~~-p--~~~~~~--G~~~v~L~-------------~~G- 224 (321)
..++||.|-|- |.. ..+.|++|++++|++|+... . +...+. +...+++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 44569999876 332 23788999999999999863 2 222222 23344442 356
Q ss_pred eEEEEcCCC-----------CCCCC-CCeEEEEEeCCCC
Q 020799 225 EYYFTSTYL-----------SHCSL-GQRLAINVTGTST 251 (321)
Q Consensus 225 ~~yFic~~~-----------~HC~~-GmKl~I~V~~~~~ 251 (321)
.|||||+-. |+|.. +|||.|.|.....
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~ 143 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDAS 143 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC--
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCCC
Confidence 899999864 78986 8999999966543
No 71
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=96.99 E-value=0.016 Score=54.48 Aligned_cols=193 Identities=14% Similarity=0.157 Sum_probs=102.2
Q ss_pred CeeEeCCEEEEEecCC-----CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecCc-----ccccc
Q 020799 53 QTFSVGDILLFNFTTG-----QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLE-----LHCTL 119 (321)
Q Consensus 53 ~~F~vGD~LvF~y~~~-----~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~-----~HC~~ 119 (321)
.+++.||+|.+++.+. -|.+..-.....+.- ..+.....|. ..|+++++|++||-|... .|=..
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~---~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~ 142 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG---GGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVS 142 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG---GGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHT
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCCC---CceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhC
Confidence 5689999999988754 366654221111110 1111233343 367778899999999986 37788
Q ss_pred CceeEEEecCCCCCCCCCCCCCCCceeeeecCcccc-----------------------------------ccCCCCCcc
Q 020799 120 GQKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGW-----------------------------------AIPPGGALF 164 (321)
Q Consensus 120 GmKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW-----------------------------------~~~~~~~~~ 164 (321)
||.-.+.|......+.+...|.....++.+.- ..| .++.. ...
T Consensus 143 Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l-~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~-~~~ 220 (333)
T 1mzy_A 143 GMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGE-SDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGA-VGA 220 (333)
T ss_dssp TCEEEEEEECTTCCBCTTSCBCCCSEEEEEEE-EEECCCBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTS-TTT
T ss_pred CCEEEEEEccCcCccccccCCCccchheeeee-eeeccCccccccccccccccccccchhHHhhccCCcEEEECCc-ccc
Confidence 99999888743221111111111123332211 113 22110 001
Q ss_pred cccccccceeEeCCEEEEeecCC--CCcEEEeC-ccc--cccccC-CCCc---c--cccCC---CeEEEeecCeeEEEEc
Q 020799 165 YASWASFYSFFVCDTLVFNFANG--TQDVAIVP-KDV--YETCNI-NSTI---A--VFTSS---PVKITLKFPGEYYFTS 230 (321)
Q Consensus 165 Y~~Wa~~~~F~vGD~LvF~y~~~--~h~V~~V~-~~~--y~~C~~-~~p~---~--~~~~G---~~~v~L~~~G~~yFic 230 (321)
|.. ....+++.|+++.|...+. .+....+. ... ...-.. ..+. . ...-| ...|+.+++|.++|.|
T Consensus 221 ~~~-~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~c 299 (333)
T 1mzy_A 221 LTG-EGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFLQPGVYAYVN 299 (333)
T ss_dssp TSG-GGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEE
T ss_pred cCC-CcceEecCCCEEEEEECCCCCccccEEECCCCeEEEeCCcccCCCccCcceEEECCCceEEEEEEcCCCEEEEEec
Confidence 110 1236788899988866421 22222211 000 000011 1111 1 11223 2357778999999999
Q ss_pred CCCCCC-CCCCeEEEEEeCCCC
Q 020799 231 TYLSHC-SLGQRLAINVTGTST 251 (321)
Q Consensus 231 ~~~~HC-~~GmKl~I~V~~~~~ 251 (321)
-...|+ ..||.-.+.|.....
T Consensus 300 h~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 300 HNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp SSHHHHHTTCCEEEEEEESCCC
T ss_pred ChhhhHhhCCCEEEEEEcCCCC
Confidence 999999 999999999986443
No 72
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=96.94 E-value=0.0013 Score=57.49 Aligned_cols=74 Identities=24% Similarity=0.449 Sum_probs=48.1
Q ss_pred CeeEeCCEEEEE---ecC-------CCccEEEeCcccccccCCCCCCC-c------c-CCCCcEEEec------------
Q 020799 53 QTFSVGDILLFN---FTT-------GQQDVASVTKEAYENCNPASPIS-R------K-TTGPAEFSLE------------ 102 (321)
Q Consensus 53 ~~F~vGD~LvF~---y~~-------~~hsV~~v~~~~Y~~C~~~~~~~-~------~-~~G~~~v~L~------------ 102 (321)
...++||.|-+- |+. ....++.|++++|++|+...... . . ..|..+|++.
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 468899999774 542 24567899999999998754321 1 1 1133333332
Q ss_pred -ccc-cEEEEecC-----ccccccCceeEEEecC
Q 020799 103 -AAG-DYYFICTL-----ELHCTLGQKLAIHVTG 129 (321)
Q Consensus 103 -~~G-~~yFic~~-----~~HC~~GmKl~I~V~~ 129 (321)
++| .||||++- ++-| |||.|.|..
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p 162 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRP 162 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECC
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEc
Confidence 456 68888763 2346 999999985
No 73
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=96.70 E-value=0.0039 Score=54.80 Aligned_cols=77 Identities=27% Similarity=0.488 Sum_probs=48.0
Q ss_pred CCeeEeCCEEEEE---ecC--------CCccEEEeCcccccccCCCC-CCCc------cC-CCCcEEEec----------
Q 020799 52 MQTFSVGDILLFN---FTT--------GQQDVASVTKEAYENCNPAS-PISR------KT-TGPAEFSLE---------- 102 (321)
Q Consensus 52 ~~~F~vGD~LvF~---y~~--------~~hsV~~v~~~~Y~~C~~~~-~~~~------~~-~G~~~v~L~---------- 102 (321)
...+++||.|-+- |+. ....+++|++++|+.|+... +... .. .|..+|++.
T Consensus 49 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~G 128 (182)
T 3czu_B 49 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLG 128 (182)
T ss_dssp EEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTS
T ss_pred eEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCC
Confidence 3567999999774 542 23567899999999998764 2111 11 122223221
Q ss_pred ---ccc-cEEEEecC----ccccccCceeEEEecCCC
Q 020799 103 ---AAG-DYYFICTL----ELHCTLGQKLAIHVTGPA 131 (321)
Q Consensus 103 ---~~G-~~yFic~~----~~HC~~GmKl~I~V~~~~ 131 (321)
++| .||||++- ++.| |||.|.|....
T Consensus 129 lEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~ 162 (182)
T 3czu_B 129 KEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKI 162 (182)
T ss_dssp CCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC--
T ss_pred eeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCC
Confidence 456 68888863 4566 89999998643
No 74
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.46 E-value=0.0042 Score=49.22 Aligned_cols=67 Identities=13% Similarity=0.078 Sum_probs=44.0
Q ss_pred ccceeEeCCEEEEeecCC---CCcEEEeCccccccccCCCCcccccCCCe---EEEeecCeeEEEEcCCCCCCCC-CCeE
Q 020799 170 SFYSFFVCDTLVFNFANG---TQDVAIVPKDVYETCNINSTIAVFTSSPV---KITLKFPGEYYFTSTYLSHCSL-GQRL 242 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~---~h~V~~V~~~~y~~C~~~~p~~~~~~G~~---~v~L~~~G~~yFic~~~~HC~~-GmKl 242 (321)
...++++||.+.|.+.+. .|++..-+.. . ......|.+ .|+.+++|.|+|.|.. ||.. +|+.
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~~~H~~~i~~~~------~---~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g 106 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSPISEGFSIDAFG------V---QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPG 106 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSSCEEEEEGGGT------E---EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCE
T ss_pred CEEEEeCCCEEEEEEEECCCCeEEEEEcCCC------c---eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEE
Confidence 357899999999987532 5776532211 0 112333432 3445899999999987 6643 3999
Q ss_pred EEEEe
Q 020799 243 AINVT 247 (321)
Q Consensus 243 ~I~V~ 247 (321)
.|.|.
T Consensus 107 ~i~V~ 111 (112)
T 1iby_A 107 TLNVV 111 (112)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99885
No 75
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=96.41 E-value=0.021 Score=52.87 Aligned_cols=183 Identities=15% Similarity=0.183 Sum_probs=101.5
Q ss_pred CCeeEeCCEEEEEecCC---CccEEEe--CcccccccCCCCCCCccCCCC---cEEEecccccEEEEecCc---cccccC
Q 020799 52 MQTFSVGDILLFNFTTG---QQDVASV--TKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLE---LHCTLG 120 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~---~hsV~~v--~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~---~HC~~G 120 (321)
..+++.||+|.+++.+. .|++.-= .....|.= ..........|. ..|+.+.+|++||-|-.. .|=..|
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~-p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~G 145 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGT-PGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKG 145 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCC-TTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCC-CCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCc
Confidence 35789999999988643 3444321 11111110 000001122333 367778899999999986 477899
Q ss_pred ceeEEEecCCCCCCCCCCCCCCCceeeeec--C--------ccccccCCCCCcccccc---cccceeEeCCEEEEeecC-
Q 020799 121 QKLAIHVTGPAPQPSPGPSLPRTPVNYTVG--G--------NIGWAIPPGGALFYASW---ASFYSFFVCDTLVFNFAN- 186 (321)
Q Consensus 121 mKl~I~V~~~~p~p~p~~~p~ssa~~~~VG--g--------~~gW~~~~~~~~~Y~~W---a~~~~F~vGD~LvF~y~~- 186 (321)
|.-.|.|......+ ....++.+- + ..-|.++. ..| ....+++.||++.|...+
T Consensus 146 l~G~liV~~~~~~~-------~~d~e~~l~~~d~~~~~g~~~~~~~iNG------~~~~~~~~~l~v~~Ge~vr~~l~N~ 212 (288)
T 3gdc_A 146 LYGGFIVEPKEGRP-------PADDEMVMVMNGYNTDGGDDNEFYSVNG------LPFHFMDFPVKVKQHELVRIHLINV 212 (288)
T ss_dssp CEEEEEEECSSCCC-------CCSEEEEEEEEEECCSSTTCCSEEEETT------STTHHHHSCEEEETTCCEEEEEEEC
T ss_pred CeEEEEEeCCccCC-------CCcceEEEEEeeEecCCCCCcceEEECc------ccccccCcccccCCCCEEEEEEEeC
Confidence 99999998643322 111333211 1 11244321 122 134688999999988853
Q ss_pred C----CCcEEEeC--ccccccc-cCCCCc--c--cccCCC---eEEEeecCeeEEEEcCCCCCCCCCCeEEEEEeC
Q 020799 187 G----TQDVAIVP--KDVYETC-NINSTI--A--VFTSSP---VKITLKFPGEYYFTSTYLSHCSLGQRLAINVTG 248 (321)
Q Consensus 187 ~----~h~V~~V~--~~~y~~C-~~~~p~--~--~~~~G~---~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~~ 248 (321)
+ .|.+..-- ..-++.= ....+. . ....|. ..++.+.+|.+.|.|-+..|=++||...+.|.+
T Consensus 213 g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 213 LEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp CCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 2 15554311 1000000 000111 0 112222 356667999999999999999999999999864
No 76
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.31 E-value=0.0079 Score=50.70 Aligned_cols=74 Identities=24% Similarity=0.433 Sum_probs=47.8
Q ss_pred CeeEeCCEEEEE---ecC-------CCccEEEeCcccccccCCCCCCC-cc--C-----CCCcEEEec------------
Q 020799 53 QTFSVGDILLFN---FTT-------GQQDVASVTKEAYENCNPASPIS-RK--T-----TGPAEFSLE------------ 102 (321)
Q Consensus 53 ~~F~vGD~LvF~---y~~-------~~hsV~~v~~~~Y~~C~~~~~~~-~~--~-----~G~~~v~L~------------ 102 (321)
...++||.|-+- |+. ....++.|++++|+.|+...... .+ + .+...|++.
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 467899999774 542 24567899999999998754321 11 1 133333332
Q ss_pred -ccc-cEEEEecC-----ccccccCceeEEEecC
Q 020799 103 -AAG-DYYFICTL-----ELHCTLGQKLAIHVTG 129 (321)
Q Consensus 103 -~~G-~~yFic~~-----~~HC~~GmKl~I~V~~ 129 (321)
++| .||||++- ++-| |||.|.|..
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p 133 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRP 133 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECC
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEc
Confidence 356 68888763 2446 999999984
No 77
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.24 E-value=0.011 Score=49.92 Aligned_cols=76 Identities=25% Similarity=0.408 Sum_probs=50.0
Q ss_pred ceeEeCCEEEEe---ecC-------CCCcEEEeCccccccccCCCCcc-cc--c-----CCCeEEEee------------
Q 020799 172 YSFFVCDTLVFN---FAN-------GTQDVAIVPKDVYETCNINSTIA-VF--T-----SSPVKITLK------------ 221 (321)
Q Consensus 172 ~~F~vGD~LvF~---y~~-------~~h~V~~V~~~~y~~C~~~~p~~-~~--~-----~G~~~v~L~------------ 221 (321)
...++||.|-+- |.. ....+++|++++|++|+...... .+ + .+..++++.
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 567789999775 331 24567799999999998755321 11 1 144455442
Q ss_pred -cCe-eEEEEcCC-----CCCCCCCCeEEEEEeCCC
Q 020799 222 -FPG-EYYFTSTY-----LSHCSLGQRLAINVTGTS 250 (321)
Q Consensus 222 -~~G-~~yFic~~-----~~HC~~GmKl~I~V~~~~ 250 (321)
++| .||||++- ++-| |||.|.|....
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 456 78888753 3446 99999997654
No 78
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=96.15 E-value=0.0089 Score=52.52 Aligned_cols=78 Identities=23% Similarity=0.396 Sum_probs=49.7
Q ss_pred cceeEeCCEEEEe---ecC--------CCCcEEEeCccccccccCCC-Ccccc------c-CCCeEEEee----------
Q 020799 171 FYSFFVCDTLVFN---FAN--------GTQDVAIVPKDVYETCNINS-TIAVF------T-SSPVKITLK---------- 221 (321)
Q Consensus 171 ~~~F~vGD~LvF~---y~~--------~~h~V~~V~~~~y~~C~~~~-p~~~~------~-~G~~~v~L~---------- 221 (321)
....++||.|-+- |.. ....+++|++++|++|+... ....+ . .|..++++.
T Consensus 49 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~G 128 (182)
T 3czu_B 49 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLG 128 (182)
T ss_dssp EEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTS
T ss_pred eEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCC
Confidence 4677889999775 432 23567899999999999764 22211 1 233444432
Q ss_pred ---cCe-eEEEEcC----CCCCCCCCCeEEEEEeCCCC
Q 020799 222 ---FPG-EYYFTST----YLSHCSLGQRLAINVTGTST 251 (321)
Q Consensus 222 ---~~G-~~yFic~----~~~HC~~GmKl~I~V~~~~~ 251 (321)
++| .||||++ .+|.| |||.|.|.....
T Consensus 129 lEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~ 163 (182)
T 3czu_B 129 KEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKIT 163 (182)
T ss_dssp CCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC---
T ss_pred eeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCCC
Confidence 456 7889986 35666 999999986544
No 79
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=96.14 E-value=0.011 Score=51.63 Aligned_cols=77 Identities=25% Similarity=0.409 Sum_probs=51.0
Q ss_pred ceeEeCCEEEEe---ecC-------CCCcEEEeCccccccccCCCCcc-cc--c-----CCCeEEEee------------
Q 020799 172 YSFFVCDTLVFN---FAN-------GTQDVAIVPKDVYETCNINSTIA-VF--T-----SSPVKITLK------------ 221 (321)
Q Consensus 172 ~~F~vGD~LvF~---y~~-------~~h~V~~V~~~~y~~C~~~~p~~-~~--~-----~G~~~v~L~------------ 221 (321)
...++||.|-+- |+. ....+++|++++|++|+..+... .+ + .|..++++.
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 567789999775 432 24567799999999998755331 11 1 134455442
Q ss_pred -cCe-eEEEEcCC-----CCCCCCCCeEEEEEeCCCC
Q 020799 222 -FPG-EYYFTSTY-----LSHCSLGQRLAINVTGTST 251 (321)
Q Consensus 222 -~~G-~~yFic~~-----~~HC~~GmKl~I~V~~~~~ 251 (321)
++| .||||++- ++-| |||.|.|...+.
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 556 78888763 2346 999999987654
No 80
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.11 E-value=0.0065 Score=51.34 Aligned_cols=75 Identities=21% Similarity=0.295 Sum_probs=48.3
Q ss_pred eEeCCEEEEE---ecCC------CccEEEeCcccccccCCCCC-CCcc--C--CCCcEEEec-------------ccc-c
Q 020799 55 FSVGDILLFN---FTTG------QQDVASVTKEAYENCNPASP-ISRK--T--TGPAEFSLE-------------AAG-D 106 (321)
Q Consensus 55 F~vGD~LvF~---y~~~------~hsV~~v~~~~Y~~C~~~~~-~~~~--~--~G~~~v~L~-------------~~G-~ 106 (321)
.++||.|-+- |+.+ ...++.|++++|+.|+.... ...+ + .+...|++. ++| .
T Consensus 25 v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~~ 104 (140)
T 2vsm_B 25 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNKD 104 (140)
T ss_dssp CCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 4679999774 4322 46788899999999988632 1111 1 122333332 445 6
Q ss_pred EEEEecC-----------ccccc-cCceeEEEecC
Q 020799 107 YYFICTL-----------ELHCT-LGQKLAIHVTG 129 (321)
Q Consensus 107 ~yFic~~-----------~~HC~-~GmKl~I~V~~ 129 (321)
||||++- +|-|. +.|||.|.|..
T Consensus 105 YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 105 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred eEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 8888774 35896 58999999963
No 81
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.02 E-value=0.0054 Score=48.59 Aligned_cols=66 Identities=15% Similarity=0.191 Sum_probs=43.1
Q ss_pred CCeeEeCCEEEEEecCC---CccEEEeCcccccccCCCCCCCccCCCC-cEEEe--cccccEEEEecCccccc-cCceeE
Q 020799 52 MQTFSVGDILLFNFTTG---QQDVASVTKEAYENCNPASPISRKTTGP-AEFSL--EAAGDYYFICTLELHCT-LGQKLA 124 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~---~hsV~~v~~~~Y~~C~~~~~~~~~~~G~-~~v~L--~~~G~~yFic~~~~HC~-~GmKl~ 124 (321)
..+++.||.+.|.+.+. .|++..-+. . . ......|. .++++ +++|.|+|.|.. ||. .+|+..
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---~---~---~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~ 107 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---G---V---QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGT 107 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---T---E---EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---C---c---eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEE
Confidence 46899999999976543 577653221 1 0 11123343 24444 899999999998 674 349999
Q ss_pred EEec
Q 020799 125 IHVT 128 (321)
Q Consensus 125 I~V~ 128 (321)
|.|.
T Consensus 108 i~V~ 111 (112)
T 1iby_A 108 LNVV 111 (112)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9885
No 82
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=95.88 E-value=0.01 Score=50.16 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=50.5
Q ss_pred ceeEeCCEEEEe---ecC---------CCCcEEEeCccccccccCCC-Ccccc--c--CCCeEEEee-------------
Q 020799 172 YSFFVCDTLVFN---FAN---------GTQDVAIVPKDVYETCNINS-TIAVF--T--SSPVKITLK------------- 221 (321)
Q Consensus 172 ~~F~vGD~LvF~---y~~---------~~h~V~~V~~~~y~~C~~~~-p~~~~--~--~G~~~v~L~------------- 221 (321)
...++||.|-+- |.. ....+++|++++|++|+... +...+ + .+..++++.
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF 101 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEF 101 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceee
Confidence 466778999775 332 24568889999999999863 22221 1 233344432
Q ss_pred cCe-eEEEEcCC-----------CCCCCC-CCeEEEEEe
Q 020799 222 FPG-EYYFTSTY-----------LSHCSL-GQRLAINVT 247 (321)
Q Consensus 222 ~~G-~~yFic~~-----------~~HC~~-GmKl~I~V~ 247 (321)
++| .||||++- +|-|.. .|||.|.|.
T Consensus 102 ~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 102 RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 455 88899864 467885 899999985
No 83
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=95.86 E-value=0.13 Score=48.35 Aligned_cols=187 Identities=14% Similarity=0.175 Sum_probs=98.8
Q ss_pred CCeeEeCCEEEEEecCC-----CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecC---ccccccC
Q 020799 52 MQTFSVGDILLFNFTTG-----QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTL---ELHCTLG 120 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~-----~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~---~~HC~~G 120 (321)
..+++.||++.+++.+. .|++..=.....|. ... ......|. ..|+.+++|++||-|.. ..|-..|
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG--~~~-~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~G 147 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG--GAA-ATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANG 147 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG--GTT-TTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC--CCc-ceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcc
Confidence 35789999999987654 45554311011110 000 11123343 35667889999999986 4567789
Q ss_pred ceeEEEecCCCCCCCCCCCCCCCceeeeecCccccccCCC------------------C---Cccccccc----ccceeE
Q 020799 121 QKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGWAIPPG------------------G---ALFYASWA----SFYSFF 175 (321)
Q Consensus 121 mKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW~~~~~------------------~---~~~Y~~Wa----~~~~F~ 175 (321)
|.-.|.|....+.| . ...++.+-- ..|..... . ..+=..|. ...+++
T Consensus 148 l~G~~iV~~~~~~p------~-~d~e~~l~~-~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~ 219 (327)
T 1kbv_A 148 MYGLILVEPKEGLP------K-VDKEFYIVQ-GDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKAK 219 (327)
T ss_dssp CEEEEEEECTTCCC------C-CSEEEEEEE-EEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTTTSGGGCEEEE
T ss_pred eEEEEEEecCCCCC------C-CceEEEEEe-eeeeccCccccccccccChhHhccCCCceEEEcCcccCCCCceeEEeC
Confidence 99999998643211 1 112222110 01211100 0 00001121 235778
Q ss_pred eCCEEEEeecC----CCCcEEEeCcccccc----ccCCCCc----ccccCCC---eEEEeecCeeEEEEcCCCCCC-CCC
Q 020799 176 VCDTLVFNFAN----GTQDVAIVPKDVYET----CNINSTI----AVFTSSP---VKITLKFPGEYYFTSTYLSHC-SLG 239 (321)
Q Consensus 176 vGD~LvF~y~~----~~h~V~~V~~~~y~~----C~~~~p~----~~~~~G~---~~v~L~~~G~~yFic~~~~HC-~~G 239 (321)
.|+++.|..-+ ..|.+..... .++- -....+. -....|. ..|+.+++|.++|.|....|| ..|
T Consensus 220 ~G~~vRlRliN~~~~~~~~~~l~Gh-~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g 298 (327)
T 1kbv_A 220 AGETVRMYVGNGGPNLVSSFHVIGE-IFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKG 298 (327)
T ss_dssp TTEEEEEEEEEEESSCCEEEEEETC-CBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSS
T ss_pred CCCEEEEEEECCCCCCceeEEEeCC-EEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCC
Confidence 89999888753 2344433211 0000 0000111 1122232 356778899999999999998 789
Q ss_pred CeEEEEEeCCC
Q 020799 240 QRLAINVTGTS 250 (321)
Q Consensus 240 mKl~I~V~~~~ 250 (321)
|...|.|....
T Consensus 299 ~~a~l~~~g~~ 309 (327)
T 1kbv_A 299 ALGQLKVEGAE 309 (327)
T ss_dssp CEEEEEEESCC
T ss_pred cEEEEEECCCC
Confidence 98888887543
No 84
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=95.60 E-value=0.014 Score=49.37 Aligned_cols=75 Identities=21% Similarity=0.243 Sum_probs=48.5
Q ss_pred eeEeCCEEEEE---ecC---------CCccEEEeCcccccccCCCC-CCCcc--C--CCCcEEEec-------------c
Q 020799 54 TFSVGDILLFN---FTT---------GQQDVASVTKEAYENCNPAS-PISRK--T--TGPAEFSLE-------------A 103 (321)
Q Consensus 54 ~F~vGD~LvF~---y~~---------~~hsV~~v~~~~Y~~C~~~~-~~~~~--~--~G~~~v~L~-------------~ 103 (321)
..++||.|-+- |+. ....++.|++++|+.|+... +...+ + .+...|++. +
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF~ 102 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEFR 102 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCCC
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceeee
Confidence 57889999774 543 24567889999999998762 21111 0 122222221 3
Q ss_pred cc-cEEEEecC-----------ccccc-cCceeEEEec
Q 020799 104 AG-DYYFICTL-----------ELHCT-LGQKLAIHVT 128 (321)
Q Consensus 104 ~G-~~yFic~~-----------~~HC~-~GmKl~I~V~ 128 (321)
+| .||||++- +|-|. +.|||.|.|.
T Consensus 103 pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 103 SHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp TTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred CCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 45 68899874 46796 4899999986
No 85
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=95.41 E-value=0.012 Score=49.61 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=49.7
Q ss_pred eeEeCCEEEEeec---C------CCCcEEEeCccccccccCCC-Ccccc--c--CCCeEEEee-------------cCe-
Q 020799 173 SFFVCDTLVFNFA---N------GTQDVAIVPKDVYETCNINS-TIAVF--T--SSPVKITLK-------------FPG- 224 (321)
Q Consensus 173 ~F~vGD~LvF~y~---~------~~h~V~~V~~~~y~~C~~~~-p~~~~--~--~G~~~v~L~-------------~~G- 224 (321)
..++||.|-+-=. . ....+++|++++|++|+... +...+ + .+...+++. ++|
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~ 103 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNK 103 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 4456999987632 2 14678889999999999763 22111 1 233444443 455
Q ss_pred eEEEEcCC-----------CCCCCC-CCeEEEEEeC
Q 020799 225 EYYFTSTY-----------LSHCSL-GQRLAINVTG 248 (321)
Q Consensus 225 ~~yFic~~-----------~~HC~~-GmKl~I~V~~ 248 (321)
.||||++- +|-|.. .|||.|.|..
T Consensus 104 ~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 104 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred ceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 78888874 357885 8999999853
No 86
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.06 E-value=0.058 Score=44.83 Aligned_cols=66 Identities=20% Similarity=0.216 Sum_probs=45.0
Q ss_pred cceeEeCCEEEEeecCC--CCcEEEeCccccccccCCCCcccccCC---CeEEEeecCeeEEEEcCC---CCCCCCCCeE
Q 020799 171 FYSFFVCDTLVFNFANG--TQDVAIVPKDVYETCNINSTIAVFTSS---PVKITLKFPGEYYFTSTY---LSHCSLGQRL 242 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~p~~~~~~G---~~~v~L~~~G~~yFic~~---~~HC~~GmKl 242 (321)
..++.+||.+.|...+. .|++..-+.. .+ .....| ...++++++|.|+|.|.. .+| .+|+.
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip~~~-~k--------~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H--~~M~g 129 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVEGTN-IN--------VEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH--QNMFG 129 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEETTSS-CE--------EEECBTBCEEEEEECCSCEEEEEECCSCCSTTS--TTCEE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEecCCC-ce--------eEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc--CCCEE
Confidence 67899999999998653 4655432211 00 111223 347889999999999986 344 68999
Q ss_pred EEEEe
Q 020799 243 AINVT 247 (321)
Q Consensus 243 ~I~V~ 247 (321)
.|.|.
T Consensus 130 ~v~V~ 134 (135)
T 2cua_A 130 TIVVK 134 (135)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 87
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=95.04 E-value=0.038 Score=47.46 Aligned_cols=74 Identities=24% Similarity=0.413 Sum_probs=45.4
Q ss_pred CeeEeCCEEEEE---ecCC--------CccEEEeCcccccccCCCCCCC-c------c-CCCCcEEEec-----------
Q 020799 53 QTFSVGDILLFN---FTTG--------QQDVASVTKEAYENCNPASPIS-R------K-TTGPAEFSLE----------- 102 (321)
Q Consensus 53 ~~F~vGD~LvF~---y~~~--------~hsV~~v~~~~Y~~C~~~~~~~-~------~-~~G~~~v~L~----------- 102 (321)
..+++||.|-+- |+.+ ...+++|++++|+.|+...... . . ..|...|++.
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~ 111 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGF 111 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCe
Confidence 457889999774 5321 2347899999999998765221 1 1 0122222221
Q ss_pred --ccc-cEEEEecC-----ccccccCceeEEEecC
Q 020799 103 --AAG-DYYFICTL-----ELHCTLGQKLAIHVTG 129 (321)
Q Consensus 103 --~~G-~~yFic~~-----~~HC~~GmKl~I~V~~ 129 (321)
++| .||||++- ++-| |||.|.|..
T Consensus 112 EF~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~ 143 (157)
T 2wo3_B 112 EFRPGHEYYYISATPPNAVDRPC---LRLKVYVRP 143 (157)
T ss_dssp CCCTTCEEEEEEECTTCSCCTTC---CEEEEEECC
T ss_pred eeeCCCeEEEEEecCCCCCCCcc---eeEEEEEEc
Confidence 345 69999874 3456 577777764
No 88
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.03 E-value=0.24 Score=40.83 Aligned_cols=73 Identities=12% Similarity=0.227 Sum_probs=43.5
Q ss_pred cceeEe-CCEEEEeecC-C-------CCcEEEeCccccc----------------cccCCCCc---ccccCCC-eEEEee
Q 020799 171 FYSFFV-CDTLVFNFAN-G-------TQDVAIVPKDVYE----------------TCNINSTI---AVFTSSP-VKITLK 221 (321)
Q Consensus 171 ~~~F~v-GD~LvF~y~~-~-------~h~V~~V~~~~y~----------------~C~~~~p~---~~~~~G~-~~v~L~ 221 (321)
..++.. |+++.|.+.+ + .|+++..+.++-+ .=+..+-+ ..+..|. ..++++
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf~ 98 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFD 98 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEEE
T ss_pred EEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEEe
Confidence 344443 9998887763 3 3999987433221 10111111 1234454 356555
Q ss_pred -----cCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 222 -----FPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 222 -----~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
++|.|-|+|+ +|= |||-.|+|.
T Consensus 99 ~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 99 VSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp GGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred CcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 5699999999 887 999999873
No 89
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=94.92 E-value=0.079 Score=45.48 Aligned_cols=76 Identities=24% Similarity=0.353 Sum_probs=48.1
Q ss_pred ceeEeCCEEEEe---ecC--------CCCcEEEeCccccccccCCCCcc-cc--cC-----CCeEEEee-----------
Q 020799 172 YSFFVCDTLVFN---FAN--------GTQDVAIVPKDVYETCNINSTIA-VF--TS-----SPVKITLK----------- 221 (321)
Q Consensus 172 ~~F~vGD~LvF~---y~~--------~~h~V~~V~~~~y~~C~~~~p~~-~~--~~-----G~~~v~L~----------- 221 (321)
..+++||.|-+- |.. ....+++|++++|++|+...... .+ +. +..++++.
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~ 111 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGF 111 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCe
Confidence 567889999776 321 12347799999999998865322 11 11 33344332
Q ss_pred --cCe-eEEEEcCC-----CCCCCCCCeEEEEEeCCC
Q 020799 222 --FPG-EYYFTSTY-----LSHCSLGQRLAINVTGTS 250 (321)
Q Consensus 222 --~~G-~~yFic~~-----~~HC~~GmKl~I~V~~~~ 250 (321)
++| .||||++- +|-| |||.|.|....
T Consensus 112 EF~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~ 145 (157)
T 2wo3_B 112 EFRPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQ 145 (157)
T ss_dssp CCCTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC
T ss_pred eeeCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCC
Confidence 455 78899864 3456 57888876544
No 90
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.90 E-value=0.33 Score=40.06 Aligned_cols=87 Identities=14% Similarity=0.204 Sum_probs=50.5
Q ss_pred EEeeCCCCCcCCCCCCcCcccccCCCeeEe-CCEEEEEecCCC--------ccEEEeCccccc----------------c
Q 020799 28 HVVGGDLGWQIPPGGAIAYVTWASMQTFSV-GDILLFNFTTGQ--------QDVASVTKEAYE----------------N 82 (321)
Q Consensus 28 ~~VGg~~GW~~~~~~~~~Y~~Was~~~F~v-GD~LvF~y~~~~--------hsV~~v~~~~Y~----------------~ 82 (321)
..|-..++..+.+. ..++.. |+++.|.+.+.. ||++..+.++-+ .
T Consensus 5 v~i~~~d~M~F~p~----------~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~ 74 (125)
T 3fsa_A 5 VDIQGNDQMQFNTN----------AITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLK 74 (125)
T ss_dssp EEEEBCTTSCBSCS----------EEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSC
T ss_pred EEEEccCCcEEecC----------EEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCC
Confidence 34554556777542 234433 999988776433 999987433221 1
Q ss_pred cCCCCCC---CccCCCC-cEEEec-----ccccEEEEecCccccccCceeEEEec
Q 020799 83 CNPASPI---SRKTTGP-AEFSLE-----AAGDYYFICTLELHCTLGQKLAIHVT 128 (321)
Q Consensus 83 C~~~~~~---~~~~~G~-~~v~L~-----~~G~~yFic~~~~HC~~GmKl~I~V~ 128 (321)
=+..+-+ .....|. .+++++ ++|.|-|+|+ +|= |||-.|.|.
T Consensus 75 ~~d~~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 75 PDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp TTCTTCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred CCCccceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 0111111 1234454 355555 5699999999 787 999999873
No 91
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=94.76 E-value=0.37 Score=46.73 Aligned_cols=181 Identities=15% Similarity=0.200 Sum_probs=99.4
Q ss_pred CCeeEeCCEEEEEecCC-----CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEe---cCccccccC
Q 020799 52 MQTFSVGDILLFNFTTG-----QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFIC---TLELHCTLG 120 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~-----~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic---~~~~HC~~G 120 (321)
..+++.||+|++++.+. .|++..=.....+.=. .......|. ..|+++++|++||-| ....|=..|
T Consensus 61 ~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG~~---~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~G 137 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGGGA---ESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANG 137 (442)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGGG---GGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred cEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCCCC---ccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCc
Confidence 35789999999988654 4555431111111000 001123333 366777899999999 445788899
Q ss_pred ceeEEEecCCCCCCCCCCCCCCCceeeeecCccccccCC-------------------------CCCccccccc--ccce
Q 020799 121 QKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGWAIPP-------------------------GGALFYASWA--SFYS 173 (321)
Q Consensus 121 mKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW~~~~-------------------------~~~~~Y~~Wa--~~~~ 173 (321)
|...+.|....+.| . ...++.+-- ..|.... |+. ...+. ...+
T Consensus 138 l~G~~iv~~~~~~~------~-~d~e~~l~l-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~--~~~~~~~~~l~ 207 (442)
T 2zoo_A 138 MYGLILVEPKEGLA------P-VDREYYLVQ-GDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGS--VGSTTDENSLT 207 (442)
T ss_dssp CEEEEEEECTTCCC------C-CSEEEEEEE-EEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTS--TTTTSGGGCEE
T ss_pred cEEEEEEeCCCCCC------C-CCceEEEEe-eeeeccCcccccccccCChhHhccCCCCEEEECCC--cCCCCCCCceE
Confidence 99999888542211 1 112222110 0122211 110 00011 2356
Q ss_pred eEeCCEEEEeecC----CCCcEEEeCccccccccCC---------CCc--c--cccCCC---eEEEeecCeeEEEEcCCC
Q 020799 174 FFVCDTLVFNFAN----GTQDVAIVPKDVYETCNIN---------STI--A--VFTSSP---VKITLKFPGEYYFTSTYL 233 (321)
Q Consensus 174 F~vGD~LvF~y~~----~~h~V~~V~~~~y~~C~~~---------~p~--~--~~~~G~---~~v~L~~~G~~yFic~~~ 233 (321)
++.|+++.|..-+ ..|++... .|... .+. . ....|. ..|+.+++|.|+|.|...
T Consensus 208 v~~G~~vrlrliN~~~~~~~~~~i~------g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~ 281 (442)
T 2zoo_A 208 AKVGETVRLYIGNGGPNLVSSFHVI------GEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSI 281 (442)
T ss_dssp EETTCEEEEEEEEEESSCCEEEEEE------TCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCSCEEEEEEESST
T ss_pred eCCCCEEEEEEEeCCCCCceeeEEc------CCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCCCCeEEEEeccc
Confidence 7889999888754 23444332 12111 011 1 112232 357778999999999999
Q ss_pred CCC-CCCCeEEEEEeCCCC
Q 020799 234 SHC-SLGQRLAINVTGTST 251 (321)
Q Consensus 234 ~HC-~~GmKl~I~V~~~~~ 251 (321)
.|+ ..||...+.|.....
T Consensus 282 ~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 282 FRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp HHHHTTSCEEEEEEESCCC
T ss_pred ccccccCceEEEEecCCCC
Confidence 997 889988888876554
No 92
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=94.72 E-value=0.061 Score=44.68 Aligned_cols=66 Identities=17% Similarity=0.295 Sum_probs=44.7
Q ss_pred CCeeEeCCEEEEEecCC--CccEEEeCcccccccCCCCCCCccCCC---CcEEEecccccEEEEecCccccc---cCcee
Q 020799 52 MQTFSVGDILLFNFTTG--QQDVASVTKEAYENCNPASPISRKTTG---PAEFSLEAAGDYYFICTLELHCT---LGQKL 123 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~--~hsV~~v~~~~Y~~C~~~~~~~~~~~G---~~~v~L~~~G~~yFic~~~~HC~---~GmKl 123 (321)
..++.+||.+.|...+. .|++..-+.. .+ .....| ...++++++|.|+|.|+. +|- .+|+.
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip~~~-~k--------~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~g 129 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVEGTN-IN--------VEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMFG 129 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEETTSS-CE--------EEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCEE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEecCCC-ce--------eEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCEE
Confidence 56899999999998643 4665431110 00 011223 247889999999999987 343 78999
Q ss_pred EEEec
Q 020799 124 AIHVT 128 (321)
Q Consensus 124 ~I~V~ 128 (321)
.|.|.
T Consensus 130 ~v~V~ 134 (135)
T 2cua_A 130 TIVVK 134 (135)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99886
No 93
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=94.50 E-value=0.56 Score=42.85 Aligned_cols=184 Identities=13% Similarity=0.045 Sum_probs=102.1
Q ss_pred CeeEeCCEEEEEecCC---CccEEE--eC-cccccccCCCCCCCccCCCC---cEEEecc-------------cccEEEE
Q 020799 53 QTFSVGDILLFNFTTG---QQDVAS--VT-KEAYENCNPASPISRKTTGP---AEFSLEA-------------AGDYYFI 110 (321)
Q Consensus 53 ~~F~vGD~LvF~y~~~---~hsV~~--v~-~~~Y~~C~~~~~~~~~~~G~---~~v~L~~-------------~G~~yFi 110 (321)
.+++.||+|++++.+. .++|.- +. ....|.-... ......|. ..|++++ .|++||-
T Consensus 38 i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~~DG~~~t--~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH 115 (276)
T 3kw8_A 38 IEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISSDGTAMN--KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYH 115 (276)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCCTTT--TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEE
T ss_pred EEEECCCEEEEEEEECCCCCccEeecCcccCCccCCCcCC--cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEe
Confidence 4789999999988753 233322 10 0111111000 01122333 3566654 4788899
Q ss_pred ecCc------cccccCceeEEEecCCCCCCCCCCCCCCCceeeeecCccccccCCCCCcccccccccceeEeCCEEEEee
Q 020799 111 CTLE------LHCTLGQKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGWAIPPGGALFYASWASFYSFFVCDTLVFNF 184 (321)
Q Consensus 111 c~~~------~HC~~GmKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y 184 (321)
|-.. .|=..||--.|.|....... + ..++.+- -..|.++.. .|. =....+++.||+++|.+
T Consensus 116 ~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-------~-drE~~l~-l~~~~iNG~---~~~-~~p~i~v~~G~~vri~l 182 (276)
T 3kw8_A 116 DHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-------P-DATHTIV-FNDMTINNR---KPH-TGPDFEATVGDRVEIVM 182 (276)
T ss_dssp CSSSSSTTCHHHHHHTCEEEEEEECTTCCC-------C-SEEEEEE-EETTEETTC---CTT-CCCCEEEETTCEEEEEE
T ss_pred cCccccccchhhhhCccEEEEEEecCCCcc-------c-ccceEEE-eccccccee---ccc-CCCCEEEecCCEEEEEE
Confidence 9874 35678999999998653321 1 3444431 234877432 121 12357899999988877
Q ss_pred cC---CCCcEEE------eCcc-ccccccCCCC-c--ccccCCC-e--EEEee---cCeeEEEEcCCCCCCCCCCeEEEE
Q 020799 185 AN---GTQDVAI------VPKD-VYETCNINST-I--AVFTSSP-V--KITLK---FPGEYYFTSTYLSHCSLGQRLAIN 245 (321)
Q Consensus 185 ~~---~~h~V~~------V~~~-~y~~C~~~~p-~--~~~~~G~-~--~v~L~---~~G~~yFic~~~~HC~~GmKl~I~ 245 (321)
.+ ..|.+.. +..+ .++.-..... . .....|. . .++.+ .+|.++|-|-+..|=.+||...+.
T Consensus 183 ~N~~~~~Hp~HlHG~~f~v~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~ 262 (276)
T 3kw8_A 183 ITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFL 262 (276)
T ss_dssp EEESSCCEEEEETTCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEE
T ss_pred ecCCCcceeEEEccceeEEeccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEE
Confidence 53 3455553 2111 1110000000 0 0112232 2 34444 589999999999999999999999
Q ss_pred EeCCCC
Q 020799 246 VTGTST 251 (321)
Q Consensus 246 V~~~~~ 251 (321)
|.....
T Consensus 263 V~~~~~ 268 (276)
T 3kw8_A 263 VKKPDG 268 (276)
T ss_dssp EECTTS
T ss_pred EeCCCC
Confidence 987654
No 94
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=94.14 E-value=1.2 Score=41.56 Aligned_cols=191 Identities=16% Similarity=0.179 Sum_probs=98.7
Q ss_pred CeeEeCCEEEEEecCC-----CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecCc----cccccC
Q 020799 53 QTFSVGDILLFNFTTG-----QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLE----LHCTLG 120 (321)
Q Consensus 53 ~~F~vGD~LvF~y~~~-----~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~----~HC~~G 120 (321)
.+++.||+|.+++.+. .|.+..-.....+. ..+......|. ..|+++++|++||-|... .|=..|
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~~---~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~G 149 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGALG---GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSG 149 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCCC---CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCc
Confidence 4678999999988764 35554321111000 01111233343 367778899999999975 367789
Q ss_pred ceeEEEecCCCCCCCCCCCCCCCceeeeecCccccccC--CCCCc---------------------------ccccc---
Q 020799 121 QKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGWAIP--PGGAL---------------------------FYASW--- 168 (321)
Q Consensus 121 mKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW~~~--~~~~~---------------------------~Y~~W--- 168 (321)
|.-.+.|......+...+.|.....++.+. ...|... ..+.. +=..|
T Consensus 150 l~G~~iV~~~~~~~~~~~~p~~~d~e~~l~-l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~ 228 (340)
T 2bw4_A 150 MNGAIMVLPRDGLKDEKGQPLTYDKIYYVG-EQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALT 228 (340)
T ss_dssp CEEEEEEECTBCEECTTSCEECCSEEEEEE-EEEECCCBCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTS
T ss_pred CEEEEEEccCcCcccccCCCcCcceeEEEe-eeeeeeccccCCcccccccccccccchhhHhhcCCCCEEEECCccCCcc
Confidence 999888875321110000011111233221 1123221 00000 00112
Q ss_pred -cccceeEeCCEEEEeecCC--C--------CcEEEeCccccccccCCCCc---c--cccCCC---eEEEeecCeeEEEE
Q 020799 169 -ASFYSFFVCDTLVFNFANG--T--------QDVAIVPKDVYETCNINSTI---A--VFTSSP---VKITLKFPGEYYFT 229 (321)
Q Consensus 169 -a~~~~F~vGD~LvF~y~~~--~--------h~V~~V~~~~y~~C~~~~p~---~--~~~~G~---~~v~L~~~G~~yFi 229 (321)
....+++.|++++|..... . |....+....+ ...+. . ....|. ..|..+++|.++|.
T Consensus 229 ~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~dG~~----~~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~ 304 (340)
T 2bw4_A 229 GDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWATGKF----RNPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYV 304 (340)
T ss_dssp GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEETTCCT----TSCCEEEESCCCBCTTEEEEEEEECCSCEEEEEE
T ss_pred CCCceEcCCCCEEEEEECCCCCccceEEecCcceEEeCCCcc----cCCccccceEEEeCCCceEEEEEECCCCeeeEEE
Confidence 1346788899888765321 1 22222221111 11111 1 112232 35677899999999
Q ss_pred cCCCC-CCCCCCeEEEEEeCCCC
Q 020799 230 STYLS-HCSLGQRLAINVTGTST 251 (321)
Q Consensus 230 c~~~~-HC~~GmKl~I~V~~~~~ 251 (321)
|.... |=..||.-.|.|.....
T Consensus 305 ~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 305 NHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp ESSHHHHHTTSCEEEEEEESCCC
T ss_pred cCchHHHHhCCCEEEEEECCCCc
Confidence 99874 66889999999986544
No 95
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=93.33 E-value=0.12 Score=50.27 Aligned_cols=78 Identities=18% Similarity=0.161 Sum_probs=52.6
Q ss_pred ccceeEeCCEEEEeecCC---CCcEEEeCccccccccCCCCcccccCCCeEEEeecCeeEEEEcCCCCCCCCCCeEEEEE
Q 020799 170 SFYSFFVCDTLVFNFANG---TQDVAIVPKDVYETCNINSTIAVFTSSPVKITLKFPGEYYFTSTYLSHCSLGQRLAINV 246 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~---~h~V~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V 246 (321)
...+++.||+|+|++.+. .|++..-.......|. +.--.+-..+|+++++|+++|.|.+.+|=..||+..|.|
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~----i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V 130 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV----NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQV 130 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB----CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee----cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEE
Confidence 458899999999888632 3777543322222232 111111123567789999999999999988899999999
Q ss_pred eCCCC
Q 020799 247 TGTST 251 (321)
Q Consensus 247 ~~~~~ 251 (321)
.....
T Consensus 131 ~~~~~ 135 (447)
T 2dv6_A 131 LPGNR 135 (447)
T ss_dssp ESSCC
T ss_pred eCCcc
Confidence 86543
No 96
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=92.12 E-value=2.3 Score=40.16 Aligned_cols=132 Identities=9% Similarity=-0.020 Sum_probs=75.4
Q ss_pred ccEEEEecCc------cccccCceeEEEecCCCCCCCCCCCCCCCceeeeecCccccccCCCCCcccccccccceeEeCC
Q 020799 105 GDYYFICTLE------LHCTLGQKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGWAIPPGGALFYASWASFYSFFVCD 178 (321)
Q Consensus 105 G~~yFic~~~------~HC~~GmKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~vGD 178 (321)
|.+||-|... .|=..||--.|.|....... + ..++.+- -..|.++.. ...+ ....+++.||
T Consensus 151 Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-------p-d~e~~l~-~~d~~iNG~--~~~~--~~~l~v~~Ge 217 (343)
T 3cg8_A 151 GYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-------P-DATHTIV-FNDMTINNR--KPHT--GPDFEATVGD 217 (343)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-------C-SEEEEEE-EETTEETTC--CTTC--CCCEEEETTC
T ss_pred eEEEEecCccccccchhhhhcCCeEEEEEecCCCCC-------C-CceEEEE-cccceeccc--CCCC--CccEEeCCCC
Confidence 6777888752 34567888887776543211 1 1444432 124776431 1111 2357899999
Q ss_pred EEEEeecC---CCCcEEE------eCccc-cccccCCCC-c----ccccCCC-eEEEe-----ecCeeEEEEcCCCCCCC
Q 020799 179 TLVFNFAN---GTQDVAI------VPKDV-YETCNINST-I----AVFTSSP-VKITL-----KFPGEYYFTSTYLSHCS 237 (321)
Q Consensus 179 ~LvF~y~~---~~h~V~~------V~~~~-y~~C~~~~p-~----~~~~~G~-~~v~L-----~~~G~~yFic~~~~HC~ 237 (321)
++.|.+.+ ..|.+.. |..+. |+ ...++ . .....|. ..|.+ +.+|.++|-|-+..|=.
T Consensus 218 ~vri~l~N~g~~~HpfHlHGh~f~v~~~G~~~--~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~ 295 (343)
T 3cg8_A 218 RVEIVMITHGEYYHTFHMHGHRWADNRTGILT--GPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSD 295 (343)
T ss_dssp EEEEEEEEESSCCEEEEETTCCEESSSSSSCC--STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH
T ss_pred EEEEEEEcCCccccccEecCcEEEEeccCccc--CCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHHh
Confidence 99888753 3565543 21111 11 00000 0 0112232 23333 57999999999999999
Q ss_pred CCCeEEEEEeCCCC
Q 020799 238 LGQRLAINVTGTST 251 (321)
Q Consensus 238 ~GmKl~I~V~~~~~ 251 (321)
.||...+.|.....
T Consensus 296 ~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 296 MGMVGLFLVKKPDG 309 (343)
T ss_dssp TTCEEEEEEECTTS
T ss_pred ccCcEEEEEecCCC
Confidence 99999999987654
No 97
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=92.05 E-value=0.26 Score=41.05 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=26.4
Q ss_pred CeeEeCCEEEE---EecCC--------CccEEEeCcccccccCCCC
Q 020799 53 QTFSVGDILLF---NFTTG--------QQDVASVTKEAYENCNPAS 87 (321)
Q Consensus 53 ~~F~vGD~LvF---~y~~~--------~hsV~~v~~~~Y~~C~~~~ 87 (321)
...++||.|-+ +|+.+ ...++.|++++|+.|+...
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 67 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 67 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCC
Confidence 46789999976 45432 3567889999999998765
No 98
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=91.92 E-value=2.4 Score=39.54 Aligned_cols=185 Identities=15% Similarity=0.201 Sum_probs=95.5
Q ss_pred CCeeEeCCEEEEEecCC---CccEEEe--Cc---ccccccCCCCCCCccCCCC---cEEEecccccEEEEecCccc-c--
Q 020799 52 MQTFSVGDILLFNFTTG---QQDVASV--TK---EAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLELH-C-- 117 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~---~hsV~~v--~~---~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~~H-C-- 117 (321)
..+++.||+|++++.+. .|++.-= .. ...|.=. .........|. ..|+++++|++||-|..... .
T Consensus 35 ~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p-~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~ 113 (318)
T 3g5w_A 35 LIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVP-HATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVT 113 (318)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCB-TTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHH
T ss_pred eEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCc-ccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhc
Confidence 35789999999988653 3444321 10 0111100 00001122333 36778889999999987532 1
Q ss_pred ccCceeEEEecCCCCCCCCCCCCCCCceeee--ecC------------------ccccccCCCCCcccccccc--cceeE
Q 020799 118 TLGQKLAIHVTGPAPQPSPGPSLPRTPVNYT--VGG------------------NIGWAIPPGGALFYASWAS--FYSFF 175 (321)
Q Consensus 118 ~~GmKl~I~V~~~~p~p~p~~~p~ssa~~~~--VGg------------------~~gW~~~~~~~~~Y~~Wa~--~~~F~ 175 (321)
..||.-.|.|....+.+- +.....++. .+| ..-|.++. ..|.. ..+++
T Consensus 114 ~~Gl~G~lIV~~~~~~~~----~~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING------~~~~~~~~l~v~ 183 (318)
T 3g5w_A 114 MRGMWGPLIVEPKNPLPI----EKTVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINA------KSFPETQPIRVK 183 (318)
T ss_dssp HSCCEEEEEEECSSCCHH----HHTCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETT------BCBTSSCCEEEC
T ss_pred cCCCEEEEEEcCCCcccc----cccccceeEEEEEeeccccccccccCCCCCCcCcEEEEcC------cCCCCCccEEeC
Confidence 269988888875432110 001122222 121 01133221 11222 25778
Q ss_pred eCCEEEEeecCC---CCcEE-------EeCccccccccCCCCc----ccccCCC---eEEEeecCeeEEEEcCCCCCCC-
Q 020799 176 VCDTLVFNFANG---TQDVA-------IVPKDVYETCNINSTI----AVFTSSP---VKITLKFPGEYYFTSTYLSHCS- 237 (321)
Q Consensus 176 vGD~LvF~y~~~---~h~V~-------~V~~~~y~~C~~~~p~----~~~~~G~---~~v~L~~~G~~yFic~~~~HC~- 237 (321)
.|+++.|.+.+. .|.+. .+..+... ...|. .....|. ..|+.+.+|.+.|-|-+..|-.
T Consensus 184 ~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~---~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~ 260 (318)
T 3g5w_A 184 KGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP---LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTN 260 (318)
T ss_dssp TTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE---EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCB
T ss_pred CCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc---cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhc
Confidence 899998877532 23332 22211100 00111 0112232 3567789999999999999998
Q ss_pred -----CCCeEEEEEeCCC
Q 020799 238 -----LGQRLAINVTGTS 250 (321)
Q Consensus 238 -----~GmKl~I~V~~~~ 250 (321)
.||...|.+....
T Consensus 261 g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 261 GDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp TTBSSCBSEEEEEETTTC
T ss_pred cCcCCCCCEEEEEECCCC
Confidence 5677778876543
No 99
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=91.62 E-value=0.23 Score=46.08 Aligned_cols=138 Identities=10% Similarity=0.081 Sum_probs=58.6
Q ss_pred ccEEEEecCcc--ccccCceeEEEecCCCCCC-CCCCCCCCCceeee--ecC---ccc--------cccCCCCCcccccc
Q 020799 105 GDYYFICTLEL--HCTLGQKLAIHVTGPAPQP-SPGPSLPRTPVNYT--VGG---NIG--------WAIPPGGALFYASW 168 (321)
Q Consensus 105 G~~yFic~~~~--HC~~GmKl~I~V~~~~p~p-~p~~~p~ssa~~~~--VGg---~~g--------W~~~~~~~~~Y~~W 168 (321)
|++||-|-... |-..||--.|.|..+.... .+.+ .....++. ..+ ... |.++.. .|. .
T Consensus 140 GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~--~~~d~e~~l~~~d~d~~~~~~~~~~~~~~ING~---~~~-~ 213 (306)
T 1sdd_A 140 LTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQ--KMFEKQHVLMFAVFDESKSWNQTSSLMYTVNGY---VNG-T 213 (306)
T ss_dssp EEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSB--SSSCCCCCCBCCEEETTSSSSCCCCEEECSSSC---CSS-C
T ss_pred eEEEEeccCCchhhhccCceEEEEEccCCCCCccCCc--CcccceEEEEEEecccccccccCCCcceeeCCE---ecC-C
Confidence 79999998654 6678998888887643210 0101 11111111 111 112 333211 111 1
Q ss_pred cccceeEeCCEEEEeecCC-CC-cEEEeC--cccccc-ccCCCCcccccCC---CeEEEeecCeeEEEEcCCCCCCCCCC
Q 020799 169 ASFYSFFVCDTLVFNFANG-TQ-DVAIVP--KDVYET-CNINSTIAVFTSS---PVKITLKFPGEYYFTSTYLSHCSLGQ 240 (321)
Q Consensus 169 a~~~~F~vGD~LvF~y~~~-~h-~V~~V~--~~~y~~-C~~~~p~~~~~~G---~~~v~L~~~G~~yFic~~~~HC~~Gm 240 (321)
....+++.||++.|..-+. .. ....+. ...++. =.....+. ...| ...|+.+++|.++|.|-...|-.+||
T Consensus 214 ~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~dG~~~dtv~-l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM 292 (306)
T 1sdd_A 214 MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQNHHKISAIT-LVSATSTTANMTVSPEGRWTIASLIPRHFQAGM 292 (306)
T ss_dssp CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEETTEECSCCC-EETTCCBC--------CCCCCBCCSTTTGGGTC
T ss_pred CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeeeCCEEcceEE-ECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCC
Confidence 2346788899999887643 11 222111 111110 00011111 1122 23677789999999999999999999
Q ss_pred eEEEEEeCC
Q 020799 241 RLAINVTGT 249 (321)
Q Consensus 241 Kl~I~V~~~ 249 (321)
...+.|...
T Consensus 293 ~~~~~V~~~ 301 (306)
T 1sdd_A 293 QAYIDIKNC 301 (306)
T ss_dssp BCCC-----
T ss_pred eEEEEEecC
Confidence 999988754
No 100
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.03 E-value=0.26 Score=50.57 Aligned_cols=69 Identities=14% Similarity=0.157 Sum_probs=46.2
Q ss_pred ccceeEeCCEEEEeecCC------CCcEEEeCccccccccCCCCcccccCCC---eEEEeecCeeEEEEcCC---CCCCC
Q 020799 170 SFYSFFVCDTLVFNFANG------TQDVAIVPKDVYETCNINSTIAVFTSSP---VKITLKFPGEYYFTSTY---LSHCS 237 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~------~h~V~~V~~~~y~~C~~~~p~~~~~~G~---~~v~L~~~G~~yFic~~---~~HC~ 237 (321)
...++++||+|.|...+. .|++..-+.. .+ ....-|. ..|+++++|.|||.|.. ..|
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~g-v~--------~~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H-- 581 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYG-VA--------MEIGPQMTSSVTFVAANPGVYWYYCQWFCHALH-- 581 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT-EE--------EEECTTCEEEEEEECCSCEEEEEECCSCCSTTC--
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCC-cc--------eeeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--
Confidence 356888999999997652 4666542211 00 1122243 36788999999999984 356
Q ss_pred CCCeEEEEEeCC
Q 020799 238 LGQRLAINVTGT 249 (321)
Q Consensus 238 ~GmKl~I~V~~~ 249 (321)
.||+..|.|...
T Consensus 582 ~gM~G~IiV~p~ 593 (595)
T 1fwx_A 582 MEMRGRMLVEPK 593 (595)
T ss_dssp TTCEEEEEEECC
T ss_pred cCCEEEEEEEcC
Confidence 499999999753
No 101
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=90.50 E-value=0.33 Score=40.43 Aligned_cols=77 Identities=19% Similarity=0.303 Sum_probs=45.9
Q ss_pred cceeEeCCEEEEe---ecC--------CCCcEEEeCccccccccCCC-Ccccc------c-CCCeEEEee----------
Q 020799 171 FYSFFVCDTLVFN---FAN--------GTQDVAIVPKDVYETCNINS-TIAVF------T-SSPVKITLK---------- 221 (321)
Q Consensus 171 ~~~F~vGD~LvF~---y~~--------~~h~V~~V~~~~y~~C~~~~-p~~~~------~-~G~~~v~L~---------- 221 (321)
....++||.|-+- |+. ....+..|++++|++|+..+ +...+ . .|..++++.
T Consensus 21 ~v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G 100 (132)
T 3hei_B 21 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLG 100 (132)
T ss_dssp EEEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTS
T ss_pred eEEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCC
Confidence 3566789988664 322 23467789999999999765 22221 1 244455442
Q ss_pred ---cCe-eEEEEcCCCCCCCC-CCeEEEEEe
Q 020799 222 ---FPG-EYYFTSTYLSHCSL-GQRLAINVT 247 (321)
Q Consensus 222 ---~~G-~~yFic~~~~HC~~-GmKl~I~V~ 247 (321)
++| .||||++--.|=.. =.||.|.|.
T Consensus 101 ~EF~pG~~YY~ISt~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 101 KEFKEGHSYYYISKPIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCCCTTCEEEEEEEESSCCCCSCCEEEEEEC
T ss_pred eeecCCCcEEEEEccCCCCCCcceEEEEEEE
Confidence 456 78888873222221 168888774
No 102
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.76 E-value=0.58 Score=48.04 Aligned_cols=67 Identities=10% Similarity=0.204 Sum_probs=45.7
Q ss_pred ccceeEeCCEEEEeecCC------CCcEEEeCccccccccCCCCcc-cccCCC---eEEEeecCeeEEEEcCCCCCCCCC
Q 020799 170 SFYSFFVCDTLVFNFANG------TQDVAIVPKDVYETCNINSTIA-VFTSSP---VKITLKFPGEYYFTSTYLSHCSLG 239 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~------~h~V~~V~~~~y~~C~~~~p~~-~~~~G~---~~v~L~~~G~~yFic~~~~HC~~G 239 (321)
...++.+||.+.|...+. .|++..-+.. ++ ...-|. ..++.+++|.|+|+|+. +|..+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG----------IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~ 625 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG----------VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHAL 625 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT----------EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTT
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCC----------ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCC
Confidence 467888999999987652 4666542211 11 122233 36788999999999997 56554
Q ss_pred ---CeEEEEEeC
Q 020799 240 ---QRLAINVTG 248 (321)
Q Consensus 240 ---mKl~I~V~~ 248 (321)
|+..|.|..
T Consensus 626 Hs~M~G~ViVEP 637 (638)
T 3sbq_A 626 HMEMVGRMMVEP 637 (638)
T ss_dssp CTTCEEEEEEEC
T ss_pred cccceEEEEEec
Confidence 999999863
No 103
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=89.62 E-value=9 Score=35.35 Aligned_cols=137 Identities=12% Similarity=0.003 Sum_probs=77.9
Q ss_pred ccccEEEEecCcc------ccccCceeEEEecCCCCCCCCCCCCCCCceeeeecCccccccCCCCCcccccccccceeEe
Q 020799 103 AAGDYYFICTLEL------HCTLGQKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGWAIPPGGALFYASWASFYSFFV 176 (321)
Q Consensus 103 ~~G~~yFic~~~~------HC~~GmKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~v 176 (321)
..|++||-|-+.+ |=..||--.|.|..+.... + ..++.+= -..|++......+ ....++++
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-------~-d~e~~l~-~~d~t~Ng~~~~~----~~~l~v~~ 180 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-------P-DRTHTIV-FNDMTINNRPAHT----GPDFEATV 180 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCBC-------C-SEEEEEE-EETTEETTCCTTC----CCCEEEET
T ss_pred CceEEEEeecCcccccchhhhhccccCceEeecccccc-------c-cccceee-ccchhcccCCccc----cccccccc
Confidence 4589999987643 2457999889888643311 1 2333321 1247764321100 13468899
Q ss_pred CCEEEEeecC---CCCcEEE------eCccccccccCCCCc--c--cccCCC-eEEEe-----ecCeeEEEEcCCCCCCC
Q 020799 177 CDTLVFNFAN---GTQDVAI------VPKDVYETCNINSTI--A--VFTSSP-VKITL-----KFPGEYYFTSTYLSHCS 237 (321)
Q Consensus 177 GD~LvF~y~~---~~h~V~~------V~~~~y~~C~~~~p~--~--~~~~G~-~~v~L-----~~~G~~yFic~~~~HC~ 237 (321)
||.+.|...+ ..|.... |...+...-....+. . ....|. ..+.+ +.||.+.|-|-+..|=.
T Consensus 181 Ge~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~ 260 (313)
T 3tas_A 181 GDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSD 260 (313)
T ss_dssp TCEEEEEEEEESSCCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH
T ss_pred CCEEEEEEecccccceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHH
Confidence 9999888753 3344443 211111111111111 1 112232 22222 35899999999999999
Q ss_pred CCCeEEEEEeCCCCC
Q 020799 238 LGQRLAINVTGTSTP 252 (321)
Q Consensus 238 ~GmKl~I~V~~~~~~ 252 (321)
+||.-.+.|......
T Consensus 261 ~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 261 MGMVGLFLVKKPDGT 275 (313)
T ss_dssp TTCEEEEEEECTTCC
T ss_pred CCCeEEEEEECCCCC
Confidence 999999999987664
No 104
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=89.14 E-value=8.3 Score=35.46 Aligned_cols=137 Identities=12% Similarity=0.036 Sum_probs=77.0
Q ss_pred ccccEEEEecCcc------ccccCceeEEEecCCCCCCCCCCCCCCCceeeeecCccccccCCCCCcccccccccceeEe
Q 020799 103 AAGDYYFICTLEL------HCTLGQKLAIHVTGPAPQPSPGPSLPRTPVNYTVGGNIGWAIPPGGALFYASWASFYSFFV 176 (321)
Q Consensus 103 ~~G~~yFic~~~~------HC~~GmKl~I~V~~~~p~p~p~~~p~ssa~~~~VGg~~gW~~~~~~~~~Y~~Wa~~~~F~v 176 (321)
..|++||-|-..+ |=..||--.|.|..+.... + ..+|.+= -..|.++.. ..++ ....+++.
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~~-------~-d~e~~l~-~~~~~~Ng~--~~~~--~p~l~v~~ 196 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDLL-------P-KRQFTVV-FNDMMINNR--AHHD--APTFEANL 196 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-------C-SEEEEEE-EETTEETTC--CTTC--CCEEEEET
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEecccccC-------c-cccceee-eeeeeecCc--cccc--cccceecC
Confidence 4599999885432 3456999999998643311 1 2343321 124665431 1111 13467889
Q ss_pred CCEEEEeec---CCCCcEEE------eCccccccccCCC-C-cc--cccCCCe-EEE-----eecCeeEEEEcCCCCCCC
Q 020799 177 CDTLVFNFA---NGTQDVAI------VPKDVYETCNINS-T-IA--VFTSSPV-KIT-----LKFPGEYYFTSTYLSHCS 237 (321)
Q Consensus 177 GD~LvF~y~---~~~h~V~~------V~~~~y~~C~~~~-p-~~--~~~~G~~-~v~-----L~~~G~~yFic~~~~HC~ 237 (321)
||++.+... ...|.... |...+-+.-.... + .. ...-|.. .+. .+.||.+.|-|-+..|=+
T Consensus 197 Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~ 276 (299)
T 3t9w_A 197 GERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSD 276 (299)
T ss_dssp TCEEEEEEEEESSCCCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHH
T ss_pred CCEEEEEEEeccccceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHh
Confidence 999887764 34465543 2111111111110 0 01 1122321 222 235899999999999999
Q ss_pred CCCeEEEEEeCCCCC
Q 020799 238 LGQRLAINVTGTSTP 252 (321)
Q Consensus 238 ~GmKl~I~V~~~~~~ 252 (321)
+||...+.|.....+
T Consensus 277 ~GM~~~f~V~~~~~~ 291 (299)
T 3t9w_A 277 MGMAGMFLVRNADGT 291 (299)
T ss_dssp TTCEEEEEEECTTSC
T ss_pred cCCeEEEEEECCCCC
Confidence 999999999877553
No 105
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.69 E-value=0.5 Score=48.50 Aligned_cols=67 Identities=15% Similarity=0.176 Sum_probs=45.7
Q ss_pred CCeeEeCCEEEEEecCC------CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecCccccccC--
Q 020799 52 MQTFSVGDILLFNFTTG------QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLELHCTLG-- 120 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~------~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~~HC~~G-- 120 (321)
..++.+||.+.|...+. .|+...-+.. .+ .....|. ..|+.+++|.|||+|+. .|-.+
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG-IK--------~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~Hs 627 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG-VS--------MEISPQQTSSITFVADKPGLHWYYCSW--FCHALHM 627 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTT-EE--------EEECTTCEEEEEEECCSCEEEEEECCS--CCSTTCT
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecCCC-ce--------eeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCcc
Confidence 56899999999987652 5776542210 00 0122333 36778999999999997 57655
Q ss_pred -ceeEEEecC
Q 020799 121 -QKLAIHVTG 129 (321)
Q Consensus 121 -mKl~I~V~~ 129 (321)
|+..|.|..
T Consensus 628 ~M~G~ViVEP 637 (638)
T 3sbq_A 628 EMVGRMMVEP 637 (638)
T ss_dssp TCEEEEEEEC
T ss_pred cceEEEEEec
Confidence 999999973
No 106
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=87.30 E-value=0.58 Score=49.27 Aligned_cols=140 Identities=11% Similarity=0.091 Sum_probs=77.9
Q ss_pred ccccEEEEecCcc--ccccCceeEEEecCCCCCCCCCCCCCCCceeeee----cC-ccccccCCC-------------CC
Q 020799 103 AAGDYYFICTLEL--HCTLGQKLAIHVTGPAPQPSPGPSLPRTPVNYTV----GG-NIGWAIPPG-------------GA 162 (321)
Q Consensus 103 ~~G~~yFic~~~~--HC~~GmKl~I~V~~~~p~p~p~~~p~ssa~~~~V----Gg-~~gW~~~~~-------------~~ 162 (321)
..|++||-|.+.. |...||--.|.|..+.... +...+...-.++.+ -| ...|....+ ..
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~~~-~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d 347 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLN-PAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMED 347 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEEECSTTSC-SSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSS
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEECCCcccc-cccCCCccceEEEEEEeecCccccchhccchhhcccCccccccCC
Confidence 6799999998865 7889999888888654321 10011112233321 12 222432100 00
Q ss_pred ccc----cccc---------ccceeEeCCEEEEeecCC-----CCcEEE------e-CccccccccCCCCcccccCCC--
Q 020799 163 LFY----ASWA---------SFYSFFVCDTLVFNFANG-----TQDVAI------V-PKDVYETCNINSTIAVFTSSP-- 215 (321)
Q Consensus 163 ~~Y----~~Wa---------~~~~F~vGD~LvF~y~~~-----~h~V~~------V-~~~~y~~C~~~~p~~~~~~G~-- 215 (321)
..+ ..|+ ...+++.||++.|...+. .|.+.. | ..+.+ ....+...-.+.
T Consensus 348 ~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~----~~Dtv~l~Pg~~~~ 423 (770)
T 2r7e_B 348 PTFKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY----KMALYNLYPGVFET 423 (770)
T ss_dssp SSSTTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC----EESEEECCTTCCCE
T ss_pred ccccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc----eeeEEEECCCeEEE
Confidence 000 0011 235788999999988642 354443 2 11111 011111111222
Q ss_pred eEEEeecCeeEEEEcCCCCCCCCCCeEEEEEe
Q 020799 216 VKITLKFPGEYYFTSTYLSHCSLGQRLAINVT 247 (321)
Q Consensus 216 ~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~ 247 (321)
..|+.+.+|.+.|.|-+..|-..||...+.|.
T Consensus 424 v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 424 VEMLPSKAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp EEECCSSCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred EEEEeCCCCceEEEeccccccccccccccccc
Confidence 35666789999999999999999999998884
No 107
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=87.27 E-value=1.2 Score=38.26 Aligned_cols=68 Identities=19% Similarity=0.172 Sum_probs=44.9
Q ss_pred cceeEeCCEEEEeecCC--CCcEEEeCccccccccCCCCccc-ccCC---CeEEEeecCeeEEEEcCC-CCCCCCCCeEE
Q 020799 171 FYSFFVCDTLVFNFANG--TQDVAIVPKDVYETCNINSTIAV-FTSS---PVKITLKFPGEYYFTSTY-LSHCSLGQRLA 243 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~p~~~-~~~G---~~~v~L~~~G~~yFic~~-~~HC~~GmKl~ 243 (321)
...+.+|+.+.|...+. .|+...-+.. ++. ...| ...++.+++|.|||.|.. -|+--.+|+..
T Consensus 94 ~l~VP~G~~Vr~~vTS~DViHsf~IP~lg----------ik~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~ 163 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPDVIHGFHVEGTN----------INVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGT 163 (168)
T ss_dssp SEEEETTSEEEEEEECSSSCEEEEETTSS----------CEEEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEE
T ss_pred EEEEeCCCeEEEEEecCCceEEEEECCCC----------eEEEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEE
Confidence 57899999999988753 3444432211 111 1123 346888999999999995 34444569999
Q ss_pred EEEeC
Q 020799 244 INVTG 248 (321)
Q Consensus 244 I~V~~ 248 (321)
|.|.+
T Consensus 164 V~V~e 168 (168)
T 3s8f_B 164 IVVKE 168 (168)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99863
No 108
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=86.96 E-value=1.3 Score=38.12 Aligned_cols=68 Identities=16% Similarity=0.201 Sum_probs=43.3
Q ss_pred CCCeeEeCCEEEEEecCC--CccEEEeCcccccccCCCCCCC-ccCCCC---cEEEecccccEEEEecC-ccccccCcee
Q 020799 51 SMQTFSVGDILLFNFTTG--QQDVASVTKEAYENCNPASPIS-RKTTGP---AEFSLEAAGDYYFICTL-ELHCTLGQKL 123 (321)
Q Consensus 51 s~~~F~vGD~LvF~y~~~--~hsV~~v~~~~Y~~C~~~~~~~-~~~~G~---~~v~L~~~G~~yFic~~-~~HC~~GmKl 123 (321)
+...+.+|+.+.|...+. .|+...-+ + .++ ....|. ..++.+++|.||+.|+. -|+-..+|+.
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP~---l-------gik~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g 162 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVEG---T-------NINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFG 162 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEETT---S-------SCEEEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEECC---C-------CeEEEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEE
Confidence 345788899998887643 34443211 1 111 112333 46788999999999996 3444467999
Q ss_pred EEEec
Q 020799 124 AIHVT 128 (321)
Q Consensus 124 ~I~V~ 128 (321)
.|.|.
T Consensus 163 ~V~V~ 167 (168)
T 3s8f_B 163 TIVVK 167 (168)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99986
No 109
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=86.88 E-value=0.56 Score=48.06 Aligned_cols=67 Identities=16% Similarity=0.184 Sum_probs=45.2
Q ss_pred CCeeEeCCEEEEEecCC------CccEEEeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecC---cccccc
Q 020799 52 MQTFSVGDILLFNFTTG------QQDVASVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTL---ELHCTL 119 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~------~hsV~~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~---~~HC~~ 119 (321)
..++++||++.|...+. .|++..-+. ..+ + ....|. ..|+++++|.|||.|.. ..| .
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~-gv~-~-------~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~ 582 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNY-GVA-M-------EIGPQMTSSVTFVAANPGVYWYYCQWFCHALH--M 582 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTT-TEE-E-------EECTTCEEEEEEECCSCEEEEEECCSCCSTTC--T
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCC-Ccc-e-------eeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--c
Confidence 45789999999997652 466654221 110 1 122333 46788999999999984 345 4
Q ss_pred CceeEEEecC
Q 020799 120 GQKLAIHVTG 129 (321)
Q Consensus 120 GmKl~I~V~~ 129 (321)
||+..|.|..
T Consensus 583 gM~G~IiV~p 592 (595)
T 1fwx_A 583 EMRGRMLVEP 592 (595)
T ss_dssp TCEEEEEEEC
T ss_pred CCEEEEEEEc
Confidence 9999999974
No 110
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=86.83 E-value=8.5 Score=39.13 Aligned_cols=149 Identities=6% Similarity=-0.003 Sum_probs=79.2
Q ss_pred cEEEecc------cc----cEEEEecCc--cccccCceeEEEecCCCCCCCCCCCCCCCcee--eeecC---ccccccCC
Q 020799 97 AEFSLEA------AG----DYYFICTLE--LHCTLGQKLAIHVTGPAPQPSPGPSLPRTPVN--YTVGG---NIGWAIPP 159 (321)
Q Consensus 97 ~~v~L~~------~G----~~yFic~~~--~HC~~GmKl~I~V~~~~p~p~p~~~p~ssa~~--~~VGg---~~gW~~~~ 159 (321)
..|++++ +| ++||-|-.. .|=..||--.+.|..+.........|.. -.+ ....+ ...|....
T Consensus 131 Y~f~~~~~~gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~-~~e~~l~l~~~d~~~~w~~~~ 209 (647)
T 1sdd_B 131 YVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVD-MREFVLLFMVFDEKKSWYYDK 209 (647)
T ss_dssp CCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSS-CCEEEEEEEEEEGGGSSCCC-
T ss_pred EEEECCcccCCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCc-ceeEEEEEEeecCcccccccc
Confidence 3667765 47 999999873 4667899988888875432110001111 122 22221 11344321
Q ss_pred CCC-----------cccccc--------cccceeEeCCEEEEeecC-C----CCcEEEeCcccccccc----CCCCcccc
Q 020799 160 GGA-----------LFYASW--------ASFYSFFVCDTLVFNFAN-G----TQDVAIVPKDVYETCN----INSTIAVF 211 (321)
Q Consensus 160 ~~~-----------~~Y~~W--------a~~~~F~vGD~LvF~y~~-~----~h~V~~V~~~~y~~C~----~~~p~~~~ 211 (321)
+.. ...+.| ....+++.||++.|...+ + .|.+..-.. .+.--. ....+ ..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~-~f~vi~~d~~~~d~v-~l 287 (647)
T 1sdd_B 210 KPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQ-TLLENGTQQHQLGVW-PL 287 (647)
T ss_dssp --------------CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTC-CEEECSSSCEEESSE-EE
T ss_pred CcccccccCCcchhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCc-EEEEecCCCcccceE-EE
Confidence 100 001111 123567789999888743 2 344432110 010000 00111 11
Q ss_pred cCCC---eEEEeecCeeEEEEcCCCCCCCCCCeEEEEEeC
Q 020799 212 TSSP---VKITLKFPGEYYFTSTYLSHCSLGQRLAINVTG 248 (321)
Q Consensus 212 ~~G~---~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~~ 248 (321)
..|. ..|..+.+|.+.|.|-+..|-.+||...+.|..
T Consensus 288 ~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 288 LPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp CTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred CCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 2232 356678899999999999999999999999974
No 111
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=86.39 E-value=9.6 Score=35.55 Aligned_cols=185 Identities=16% Similarity=0.237 Sum_probs=93.7
Q ss_pred CCeeEeCCEEEEEecCC---CccEE-----EeCcccccccCCCCCCCccCCCC---cEEEecccccEEEEecCcc--ccc
Q 020799 52 MQTFSVGDILLFNFTTG---QQDVA-----SVTKEAYENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLEL--HCT 118 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~---~hsV~-----~v~~~~Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~~--HC~ 118 (321)
..+++.||++.+++.+. .+++. +......|.=.... ......|. ..|+++++|++||-|.... |=.
T Consensus 36 ~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vt-q~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~ 114 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVT-QQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVG 114 (339)
T ss_dssp EEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTT-BCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTT
T ss_pred eEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccc-cCccCCCCeEEEEEECCCCEEEEEEecCCchhhhh
Confidence 35789999999987643 22222 11110011100000 00122333 3677888999999998754 444
Q ss_pred -cCceeEEEecCCCCCCCCCCCCCCCceeeee--cC------------------ccccccCCCCCcccccccc--cceeE
Q 020799 119 -LGQKLAIHVTGPAPQPSPGPSLPRTPVNYTV--GG------------------NIGWAIPPGGALFYASWAS--FYSFF 175 (321)
Q Consensus 119 -~GmKl~I~V~~~~p~p~p~~~p~ssa~~~~V--Gg------------------~~gW~~~~~~~~~Y~~Wa~--~~~F~ 175 (321)
.||--.+.|....+.+ .+.....++.+ +| ..-|.++. ..|.. ..+++
T Consensus 115 ~~Gl~G~liV~p~~~~~----~~~~~d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING------~~~~~~~~~~v~ 184 (339)
T 2zwn_A 115 VRGMWGPLIVDPKQPLP----IEKRVTKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNA------KSFPLTQPLRVK 184 (339)
T ss_dssp TSCCEEEEEEECSSCCT----TGGGCSEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETT------BCTTSSCCEEEC
T ss_pred cCCceEeEEecCCCccc----ccccCCceEEEEeeheecccccccCCCCCCccccceEEEcc------ccCCCcccEEEC
Confidence 8998888887432211 01111222221 21 01122211 01111 25677
Q ss_pred eCCEEEEeecCC---C-------CcEEEeCccccccccCCCCcc----cccCCC---eEEEeecCeeEEEEcCCCCCCC-
Q 020799 176 VCDTLVFNFANG---T-------QDVAIVPKDVYETCNINSTIA----VFTSSP---VKITLKFPGEYYFTSTYLSHCS- 237 (321)
Q Consensus 176 vGD~LvF~y~~~---~-------h~V~~V~~~~y~~C~~~~p~~----~~~~G~---~~v~L~~~G~~yFic~~~~HC~- 237 (321)
.|+++.|..-+. . |+...+..+.. ...+|.. ....|. ..|+.+.+|.++|-|-...||.
T Consensus 185 ~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~---~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~ 261 (339)
T 2zwn_A 185 KGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGL---PLDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTA 261 (339)
T ss_dssp TTCEEEEEEEECSSSCEEEEETTCCEEEEEETTE---EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCB
T ss_pred CCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCe---ecCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhccc
Confidence 799988887532 2 33333322110 0111211 112232 3567789999999999999963
Q ss_pred -----CCCeEEEEEeCCC
Q 020799 238 -----LGQRLAINVTGTS 250 (321)
Q Consensus 238 -----~GmKl~I~V~~~~ 250 (321)
.||...|.+....
T Consensus 262 ~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 262 GGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp TTBSSCSSEEEEEETTSC
T ss_pred ccccCCCcEEEEEECCCC
Confidence 6787777776543
No 112
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=78.93 E-value=3.4 Score=38.37 Aligned_cols=77 Identities=9% Similarity=0.056 Sum_probs=48.9
Q ss_pred cceeEeCCEEEEeecCC-----CCcEEEeCccccccccCCCCcccccCCCe---EEEeecCeeEEEEcCCCC----CCCC
Q 020799 171 FYSFFVCDTLVFNFANG-----TQDVAIVPKDVYETCNINSTIAVFTSSPV---KITLKFPGEYYFTSTYLS----HCSL 238 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~-----~h~V~~V~~~~y~~C~~~~p~~~~~~G~~---~v~L~~~G~~yFic~~~~----HC~~ 238 (321)
..+++.||+|++++.+. .|.+..-.....+ -..+......|.+ .++++++|++||-|...+ |=..
T Consensus 66 ~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~---~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 142 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGAL---GGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVS 142 (336)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred eEEEcCCCEEEEEEEcCCCCCccccceECCCCCCC---CCcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhC
Confidence 46888999999888653 4666542111000 0011112334432 677789999999998764 5568
Q ss_pred CCeEEEEEeCCC
Q 020799 239 GQRLAINVTGTS 250 (321)
Q Consensus 239 GmKl~I~V~~~~ 250 (321)
||.-.|.|....
T Consensus 143 Gl~G~liV~~~~ 154 (336)
T 1oe1_A 143 GMSGTLMVLPRD 154 (336)
T ss_dssp TCEEEEEEECTT
T ss_pred CCeEEEEEecCc
Confidence 999999997543
No 113
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=78.92 E-value=2.8 Score=38.98 Aligned_cols=76 Identities=9% Similarity=0.096 Sum_probs=49.0
Q ss_pred cceeEeCCEEEEeecCC-----CCcEEEeCccccccccCCCCcccccCCC---eEEEeecCeeEEEEcCCCC-----CCC
Q 020799 171 FYSFFVCDTLVFNFANG-----TQDVAIVPKDVYETCNINSTIAVFTSSP---VKITLKFPGEYYFTSTYLS-----HCS 237 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~-----~h~V~~V~~~~y~~C~~~~p~~~~~~G~---~~v~L~~~G~~yFic~~~~-----HC~ 237 (321)
..+++.||+|++++.+. -|.+..-...+.+.- ........|. -.|+++++|++||-|...+ |=.
T Consensus 65 ~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~---~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 141 (333)
T 1mzy_A 65 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG---GGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVV 141 (333)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG---GGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHH
T ss_pred cEEecCCCEEEEEEEECCCCcccccceecCCCCCCCC---CceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhh
Confidence 47889999999988654 366654221111100 1111233343 3677789999999998864 677
Q ss_pred CCCeEEEEEeCC
Q 020799 238 LGQRLAINVTGT 249 (321)
Q Consensus 238 ~GmKl~I~V~~~ 249 (321)
.||.-.+.|...
T Consensus 142 ~Gl~G~~iV~~~ 153 (333)
T 1mzy_A 142 SGMAGCIMVLPR 153 (333)
T ss_dssp TTCEEEEEEECT
T ss_pred CCCEEEEEEccC
Confidence 899999888743
No 114
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=77.12 E-value=9.1 Score=41.55 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=51.5
Q ss_pred CCeeEeCCEEEEEecC-----CCccEEEeC------cccccccCCCCCCCccCCCCcEEEecccccEEEEecCccccccC
Q 020799 52 MQTFSVGDILLFNFTT-----GQQDVASVT------KEAYENCNPASPISRKTTGPAEFSLEAAGDYYFICTLELHCTLG 120 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~-----~~hsV~~v~------~~~Y~~C~~~~~~~~~~~G~~~v~L~~~G~~yFic~~~~HC~~G 120 (321)
..++..||.|+.+... .-|++.+-. ...++.|...- ..+-...++.+..|++++-|-+..|=..|
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~p----g~~~t~~~~~~~~Gt~~~h~h~~~~~~~G 708 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLFP----QTSLTLHMWPDTEGTFNVECLTTDHYTGG 708 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEECT----TCEEEEEECCCSCEEEEEEECSHHHHHTT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEeecC----CceEEEEEecCCCeEEEEecCCCcccCCC
Confidence 4689999999887653 246665532 22244454211 11112466677899999999999999999
Q ss_pred ceeEEEecCC
Q 020799 121 QKLAIHVTGP 130 (321)
Q Consensus 121 mKl~I~V~~~ 130 (321)
|+..+.|...
T Consensus 709 m~g~~~V~~~ 718 (1065)
T 2j5w_A 709 MKQKYTVNQC 718 (1065)
T ss_dssp CEEEEEEECC
T ss_pred cEEEEEEcCC
Confidence 9999999764
No 115
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=76.59 E-value=14 Score=38.53 Aligned_cols=141 Identities=12% Similarity=0.109 Sum_probs=78.9
Q ss_pred cccEEEEecCcc--ccccCceeEEEecCCCCCCCCCCCCCCCceeee----ecC-ccccccCCCC-----------Cccc
Q 020799 104 AGDYYFICTLEL--HCTLGQKLAIHVTGPAPQPSPGPSLPRTPVNYT----VGG-NIGWAIPPGG-----------ALFY 165 (321)
Q Consensus 104 ~G~~yFic~~~~--HC~~GmKl~I~V~~~~p~p~p~~~p~ssa~~~~----VGg-~~gW~~~~~~-----------~~~Y 165 (321)
.|++||-|-... |=..||--.|.|..+........ ... .++. +-| ..+|....+. ....
T Consensus 154 ~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~--~~~-~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~~~~~~~ 230 (742)
T 2r7e_A 154 CLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKT--QTL-HKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWP 230 (742)
T ss_dssp SCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTT--TCC-CEECCCEECCCCSSSSCCCCCC-------CCSCCCCC
T ss_pred cEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccC--cee-eEEEEEeecccCCccccccccccccccCCCccccccC
Confidence 399999998765 56689999999987543221111 111 3332 122 2235432110 0001
Q ss_pred cccc---------ccceeEeCCEEEEeecC-C----CCcEEE------eCccccccccCCCCcccccCCCeEEEeecCee
Q 020799 166 ASWA---------SFYSFFVCDTLVFNFAN-G----TQDVAI------VPKDVYETCNINSTIAVFTSSPVKITLKFPGE 225 (321)
Q Consensus 166 ~~Wa---------~~~~F~vGD~LvF~y~~-~----~h~V~~------V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G~ 225 (321)
..|. ...+++.||++.|..-+ + .|.+.. |....-|.+. +.-...-...++.+.+|.
T Consensus 231 ~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~~~Dtv~----v~Pg~~~~v~~~~~~pG~ 306 (742)
T 2r7e_A 231 KMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASLE----ISPITFLTAQTLLMDLGQ 306 (742)
T ss_dssp CCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTEECCSCC----CCTTCCCEEEECCCSCSE
T ss_pred ceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeEecceEE----eCCCcEEEEEEEeCCCee
Confidence 1111 23578899999988753 2 344432 2110011111 111111223567789999
Q ss_pred EEEEcCCCCCCCCCCeEEEEEeCCCC
Q 020799 226 YYFTSTYLSHCSLGQRLAINVTGTST 251 (321)
Q Consensus 226 ~yFic~~~~HC~~GmKl~I~V~~~~~ 251 (321)
+.|-|-...|=..||.-.+.|.....
T Consensus 307 w~~hCH~~~H~~~GM~~~~~V~~~~~ 332 (742)
T 2r7e_A 307 FLLFCHISSHQHDGMEAYVKVDSCPE 332 (742)
T ss_dssp ECCCCCSSSSSTTSCCBCEEECCCCC
T ss_pred EEEEeCChhHHhCCCeEEEEEecCCc
Confidence 99999999999999998888876543
No 116
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=72.58 E-value=3.6 Score=38.31 Aligned_cols=75 Identities=16% Similarity=0.145 Sum_probs=47.0
Q ss_pred ccceeEeCCEEEEeecCC-----CCcEEE--eCccccccccCCCCcccccCCC---eEEEeecCeeEEEEcCCC---CCC
Q 020799 170 SFYSFFVCDTLVFNFANG-----TQDVAI--VPKDVYETCNINSTIAVFTSSP---VKITLKFPGEYYFTSTYL---SHC 236 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~-----~h~V~~--V~~~~y~~C~~~~p~~~~~~G~---~~v~L~~~G~~yFic~~~---~HC 236 (321)
...+++.||+|++.+.+. .|++.- +...|-. .. ......|. -.++++++|++||-|... .|-
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG~----~~-~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~ 144 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGG----AA-ATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHI 144 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGG----TT-TTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHH
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCCC----Cc-ceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhh
Confidence 357889999999988643 465543 1111100 00 01123343 267778999999999763 455
Q ss_pred CCCCeEEEEEeCC
Q 020799 237 SLGQRLAINVTGT 249 (321)
Q Consensus 237 ~~GmKl~I~V~~~ 249 (321)
..||.-.|.|...
T Consensus 145 ~~Gl~G~~iV~~~ 157 (327)
T 1kbv_A 145 ANGMYGLILVEPK 157 (327)
T ss_dssp HTTCEEEEEEECT
T ss_pred hcceEEEEEEecC
Confidence 6899999999754
No 117
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=68.92 E-value=3.4 Score=39.88 Aligned_cols=76 Identities=17% Similarity=0.155 Sum_probs=46.9
Q ss_pred ccceeEeCCEEEEeecCC-----CCcEEEeCccccccccCCCCc-ccccCCC---eEEEeecCeeEEEEcC---CCCCCC
Q 020799 170 SFYSFFVCDTLVFNFANG-----TQDVAIVPKDVYETCNINSTI-AVFTSSP---VKITLKFPGEYYFTST---YLSHCS 237 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~-----~h~V~~V~~~~y~~C~~~~p~-~~~~~G~---~~v~L~~~G~~yFic~---~~~HC~ 237 (321)
...+++.||+|++.+.+. .|++..=-....+- .+. .....|. -.|+++++|++||-|- ...|=.
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG----~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~ 135 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG----GAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIA 135 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG----GGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHH
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC----CCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHh
Confidence 356888999999988654 45555311000000 000 1123343 2577789999999994 445667
Q ss_pred CCCeEEEEEeCC
Q 020799 238 LGQRLAINVTGT 249 (321)
Q Consensus 238 ~GmKl~I~V~~~ 249 (321)
.||...+.|...
T Consensus 136 ~Gl~G~~iv~~~ 147 (442)
T 2zoo_A 136 NGMYGLILVEPK 147 (442)
T ss_dssp TTCEEEEEEECT
T ss_pred CccEEEEEEeCC
Confidence 899999988754
No 118
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=65.20 E-value=46 Score=34.65 Aligned_cols=74 Identities=15% Similarity=0.115 Sum_probs=46.2
Q ss_pred CCeeEeCCEEEEEecCC-----CccEE------EeCcccccccCCCCCCCccCCCCcEEEecccccEEEEecCccccccC
Q 020799 52 MQTFSVGDILLFNFTTG-----QQDVA------SVTKEAYENCNPASPISRKTTGPAEFSLEAAGDYYFICTLELHCTLG 120 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~-----~hsV~------~v~~~~Y~~C~~~~~~~~~~~G~~~v~L~~~G~~yFic~~~~HC~~G 120 (321)
..+++.||++.+..-+. .|.+. +|....-|.+. +.....-...++.+.+|.+.|-|-...|=..|
T Consensus 245 ~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~~~Dtv~----v~Pg~~~~v~~~~~~pG~w~~hCH~~~H~~~G 320 (742)
T 2r7e_A 245 GLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASLE----ISPITFLTAQTLLMDLGQFLLFCHISSHQHDG 320 (742)
T ss_dssp CCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTEECCSCC----CCTTCCCEEEECCCSCSEECCCCCSSSSSTTS
T ss_pred ceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeEecceEE----eCCCcEEEEEEEeCCCeeEEEEeCChhHHhCC
Confidence 35789999999887542 24442 22111001111 11111122355667899999999999999999
Q ss_pred ceeEEEecC
Q 020799 121 QKLAIHVTG 129 (321)
Q Consensus 121 mKl~I~V~~ 129 (321)
|.-.+.|..
T Consensus 321 M~~~~~V~~ 329 (742)
T 2r7e_A 321 MEAYVKVDS 329 (742)
T ss_dssp CCBCEEECC
T ss_pred CeEEEEEec
Confidence 998888875
No 119
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=65.15 E-value=8.4 Score=35.70 Aligned_cols=76 Identities=12% Similarity=0.153 Sum_probs=48.2
Q ss_pred cceeEeCCEEEEeecCC-----CCcEEEeCccccccccCCCCcccccCCC---eEEEeecCeeEEEEcCCCC----CCCC
Q 020799 171 FYSFFVCDTLVFNFANG-----TQDVAIVPKDVYETCNINSTIAVFTSSP---VKITLKFPGEYYFTSTYLS----HCSL 238 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~-----~h~V~~V~~~~y~~C~~~~p~~~~~~G~---~~v~L~~~G~~yFic~~~~----HC~~ 238 (321)
..+++.||+|++++.+. .|.+..-.....+ . ..+......|. -.|+++++|++||-|...+ |=..
T Consensus 72 ~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~-~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~ 148 (340)
T 2bw4_A 72 LMVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G-GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTS 148 (340)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred cEEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C-CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhC
Confidence 46889999999988754 3665542111000 0 01111233343 2677789999999998764 5668
Q ss_pred CCeEEEEEeCC
Q 020799 239 GQRLAINVTGT 249 (321)
Q Consensus 239 GmKl~I~V~~~ 249 (321)
||.-.+.|...
T Consensus 149 Gl~G~~iV~~~ 159 (340)
T 2bw4_A 149 GMNGAIMVLPR 159 (340)
T ss_dssp TCEEEEEEECT
T ss_pred cCEEEEEEccC
Confidence 99998888754
No 120
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=43.87 E-value=8.3 Score=32.09 Aligned_cols=26 Identities=19% Similarity=0.018 Sum_probs=19.6
Q ss_pred cccceeEeCCEEEEeecCCCCcEEEe
Q 020799 169 ASFYSFFVCDTLVFNFANGTQDVAIV 194 (321)
Q Consensus 169 a~~~~F~vGD~LvF~y~~~~h~V~~V 194 (321)
+..+.+++||.++|++.....-+++|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 45789999999999998643335555
No 121
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=41.91 E-value=26 Score=34.95 Aligned_cols=75 Identities=15% Similarity=0.273 Sum_probs=46.9
Q ss_pred CCeeEeCCEEEEEecCC--CccEEEe-CcccccccCCCCCC-CccCCCCcEEEecccccEEEEecCccccccCc-eeEEE
Q 020799 52 MQTFSVGDILLFNFTTG--QQDVASV-TKEAYENCNPASPI-SRKTTGPAEFSLEAAGDYYFICTLELHCTLGQ-KLAIH 126 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~--~hsV~~v-~~~~Y~~C~~~~~~-~~~~~G~~~v~L~~~G~~yFic~~~~HC~~Gm-Kl~I~ 126 (321)
+..++-|-.|.|.=-.. ..-++.+ +-++...|...--. ..+.= +....| ++|.|||..+...-|++|- |+.|.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (491)
T 3l6w_A 412 KVVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPFSFHAFEL-GKMYSV-ESGDYFMTASTTELCNDNNLRIHVH 489 (491)
T ss_pred eeEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCCccCcccc-cceEec-CCCceEecCChHHHHhCCceeEEEE
Confidence 45678888888853221 1222333 55566778764321 11111 123344 4899999999999999998 99998
Q ss_pred ec
Q 020799 127 VT 128 (321)
Q Consensus 127 V~ 128 (321)
|.
T Consensus 490 ~~ 491 (491)
T 3l6w_A 490 VD 491 (491)
T ss_pred eC
Confidence 74
No 122
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=40.84 E-value=31 Score=32.00 Aligned_cols=77 Identities=10% Similarity=0.065 Sum_probs=44.4
Q ss_pred ccceeEeCCEEEEeecCC---CCcEE-----EeCc--cccccccCCCCcccccCCC---eEEEeecCeeEEEEcCCCC--
Q 020799 170 SFYSFFVCDTLVFNFANG---TQDVA-----IVPK--DVYETCNINSTIAVFTSSP---VKITLKFPGEYYFTSTYLS-- 234 (321)
Q Consensus 170 ~~~~F~vGD~LvF~y~~~---~h~V~-----~V~~--~~y~~C~~~~p~~~~~~G~---~~v~L~~~G~~yFic~~~~-- 234 (321)
...+++.||+|++++.+. .+++. +... .|--.-.+..+ ..-|. ..|+++++|+|||-|....
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~---I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~ 111 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQP---IEAGDSYTYKFKADRIGTLWYHCHVNVNE 111 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCC---BCTTCEEEEEEECCSCEEEEEECCSSHHH
T ss_pred CeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCc---cCCCCeEEEEEECCCCEEEEEEecCCchh
Confidence 357889999999988643 23332 1111 01000000011 12233 3678889999999997654
Q ss_pred CCC-CCCeEEEEEeCC
Q 020799 235 HCS-LGQRLAINVTGT 249 (321)
Q Consensus 235 HC~-~GmKl~I~V~~~ 249 (321)
|=. .||.-.+.|...
T Consensus 112 q~~~~Gl~G~liV~p~ 127 (339)
T 2zwn_A 112 HVGVRGMWGPLIVDPK 127 (339)
T ss_dssp HTTTSCCEEEEEEECS
T ss_pred hhhcCCceEeEEecCC
Confidence 444 799888888643
No 123
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=38.87 E-value=12 Score=28.56 Aligned_cols=16 Identities=44% Similarity=1.024 Sum_probs=12.5
Q ss_pred CeeEeCCEEEEE-ecCC
Q 020799 53 QTFSVGDILLFN-FTTG 68 (321)
Q Consensus 53 ~~F~vGD~LvF~-y~~~ 68 (321)
+.|++||.|+|. |+.+
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 569999999994 6544
No 124
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=37.25 E-value=44 Score=32.96 Aligned_cols=33 Identities=27% Similarity=0.467 Sum_probs=28.1
Q ss_pred EEEe-cccccEEEEecCccccccCceeEEEecCC
Q 020799 98 EFSL-EAAGDYYFICTLELHCTLGQKLAIHVTGP 130 (321)
Q Consensus 98 ~v~L-~~~G~~yFic~~~~HC~~GmKl~I~V~~~ 130 (321)
+|++ ++.|++||=|-...|=..||--.+.|..+
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~ 150 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDP 150 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred EEecCCCCccEEEEeccCCchhcCceEEEEEcCC
Confidence 5664 56899999999988888999999999864
No 125
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=35.21 E-value=31 Score=30.51 Aligned_cols=65 Identities=14% Similarity=0.198 Sum_probs=40.5
Q ss_pred cceeEeCCEEEEeecCC--CCcEEEeCccccccccCCCCcccc-cCCC---eEEEeecCeeEEEEcCCCCCCCC---CCe
Q 020799 171 FYSFFVCDTLVFNFANG--TQDVAIVPKDVYETCNINSTIAVF-TSSP---VKITLKFPGEYYFTSTYLSHCSL---GQR 241 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~p~~~~-~~G~---~~v~L~~~G~~yFic~~~~HC~~---GmK 241 (321)
...+.+|+.+.|.-.+. .|+...-+. .++.. --|. ..++.+++|.||..|.. .|.. .|+
T Consensus 42 ~l~lP~g~~V~~~lTS~DViHSF~IP~l----------gvK~daiPGr~n~l~~~~~~pG~y~g~CsE--~CG~~Hs~M~ 109 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVMHSFFIPRL----------GSQIYAMAGMQTRLHLIANEPGTYDGICAE--ICGPGHSGMK 109 (205)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEEGGG----------TEEEEECTTCCEEEEECCSSSEEEEEEECS--CCSTTSTTCC
T ss_pred eEEEeCCCEEEEEEecCCceeeEEeccc----------CcEEEecCCceEEEEEEeCCCeEEEEEccc--ccccchhhce
Confidence 45677888888887642 233332111 01111 1132 36778999999999974 5665 499
Q ss_pred EEEEEe
Q 020799 242 LAINVT 247 (321)
Q Consensus 242 l~I~V~ 247 (321)
+.|.|.
T Consensus 110 ~~v~vv 115 (205)
T 1cyx_A 110 FKAIAT 115 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999988
No 126
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=34.32 E-value=22 Score=32.28 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=28.0
Q ss_pred EEEecccccEEEEecCccccccCceeEEEecC
Q 020799 98 EFSLEAAGDYYFICTLELHCTLGQKLAIHVTG 129 (321)
Q Consensus 98 ~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~~ 129 (321)
.++.+.+|.+.|.|-+..|=++||.-.+.|.+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 45567899999999999999999999998863
No 127
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=32.76 E-value=71 Score=31.65 Aligned_cols=79 Identities=13% Similarity=0.214 Sum_probs=48.9
Q ss_pred CCeeEeCCEEEEEecCCC----ccEEE----eCccc-ccccCCCCCCCccCCCC---cEEEecccccEEEEecCcccccc
Q 020799 52 MQTFSVGDILLFNFTTGQ----QDVAS----VTKEA-YENCNPASPISRKTTGP---AEFSLEAAGDYYFICTLELHCTL 119 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~~----hsV~~----v~~~~-Y~~C~~~~~~~~~~~G~---~~v~L~~~G~~yFic~~~~HC~~ 119 (321)
..+++.||+|+.++.+.. +++.- +..+. .|.=. .........|. .+|++++.|++||=|-...+=..
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~-~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~ 113 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTA-SISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSA 113 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCB-TTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCc-ccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhc
Confidence 457899999999886542 33321 11111 11100 00000122333 36778889999999999888889
Q ss_pred CceeEEEecCCC
Q 020799 120 GQKLAIHVTGPA 131 (321)
Q Consensus 120 GmKl~I~V~~~~ 131 (321)
||--.|.|..+.
T Consensus 114 Gl~G~liV~~~~ 125 (552)
T 1aoz_A 114 GLYGSLIVDPPQ 125 (552)
T ss_dssp TCEEEEEEECCT
T ss_pred cCeeeEEEeCCc
Confidence 999999998754
No 128
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=31.20 E-value=58 Score=32.45 Aligned_cols=76 Identities=12% Similarity=0.176 Sum_probs=48.4
Q ss_pred CCeeEeCCEEEEEecCCC----ccEEE----eC-ccccccc-CC-CCCCCccCC-CC---cEEEecccccEEEEecCccc
Q 020799 52 MQTFSVGDILLFNFTTGQ----QDVAS----VT-KEAYENC-NP-ASPISRKTT-GP---AEFSLEAAGDYYFICTLELH 116 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~~----hsV~~----v~-~~~Y~~C-~~-~~~~~~~~~-G~---~~v~L~~~G~~yFic~~~~H 116 (321)
..+++.||+|+.++.+.. +++.- +. ....|.= .. ..+ ... |. .+|+++++|++||=|-...|
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~---I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q 144 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECP---IPPKGGQRTYRWRARQYGTSWYHSHFSAQ 144 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCC---BCTTTEEEEEEEECCSCEEEEEEECSTTG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCc---cCCCCCeEEEEEECCCCEEEEEEEcccch
Confidence 356789999999886533 34422 11 1111110 00 011 122 43 37888899999999999888
Q ss_pred cccCceeEEEecCC
Q 020799 117 CTLGQKLAIHVTGP 130 (321)
Q Consensus 117 C~~GmKl~I~V~~~ 130 (321)
=..||--.|.|..+
T Consensus 145 ~~~Gl~G~liV~~~ 158 (559)
T 2q9o_A 145 YGNGVVGTIQINGP 158 (559)
T ss_dssp GGGTCEEEEEEECC
T ss_pred hcCCceEEEEecCC
Confidence 88999999999864
No 129
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=30.92 E-value=3.5e+02 Score=25.62 Aligned_cols=75 Identities=11% Similarity=0.093 Sum_probs=45.1
Q ss_pred ceeEeCCEEEEeecC---CCCcEE-------EeCc--cccccccCCCCcccccCCCe--EEEeecCeeEEEEcCCCCCCC
Q 020799 172 YSFFVCDTLVFNFAN---GTQDVA-------IVPK--DVYETCNINSTIAVFTSSPV--KITLKFPGEYYFTSTYLSHCS 237 (321)
Q Consensus 172 ~~F~vGD~LvF~y~~---~~h~V~-------~V~~--~~y~~C~~~~p~~~~~~G~~--~v~L~~~G~~yFic~~~~HC~ 237 (321)
.+++.|+++++.+.+ ..|-.+ .+.. ..++.=-....+.....|.. .+..+.+|.+.|=|-...|=.
T Consensus 350 ~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~ 429 (439)
T 2xu9_A 350 LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHED 429 (439)
T ss_dssp EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHH
T ss_pred eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhh
Confidence 578889998887754 234332 2332 22220000111122223333 345688999999999999999
Q ss_pred CCCeEEEEE
Q 020799 238 LGQRLAINV 246 (321)
Q Consensus 238 ~GmKl~I~V 246 (321)
.||-..|.|
T Consensus 430 ~GMm~~~~V 438 (439)
T 2xu9_A 430 RGMMGVLEV 438 (439)
T ss_dssp TTCEEEEEE
T ss_pred cCCcEEEEe
Confidence 999888877
No 130
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=30.46 E-value=40 Score=31.36 Aligned_cols=67 Identities=7% Similarity=0.083 Sum_probs=41.8
Q ss_pred cceeEeCCEEEEeecCC--CCcEEEeCccccccccCCCCcccc-cCCC---eEEEeecCeeEEEEcCCCCCCCC---CCe
Q 020799 171 FYSFFVCDTLVFNFANG--TQDVAIVPKDVYETCNINSTIAVF-TSSP---VKITLKFPGEYYFTSTYLSHCSL---GQR 241 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~p~~~~-~~G~---~~v~L~~~G~~yFic~~~~HC~~---GmK 241 (321)
+..+.+|+.+.|.-.+. .|+...-+. .++.. -.|. ..++.+++|.||..|.. -|.. .|+
T Consensus 190 ~lvlP~g~~V~~~ltS~DViHsf~iP~l----------g~k~daiPG~~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~ 257 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTATDVIHAWTIPAF----------AVKQDAVPGRIAQLWFSVDQEGVYFGQCSE--LCGINHAYMP 257 (298)
T ss_dssp CEEEESSSEEEEEEEESSSCEEEEEGGG----------TEEEEECTTCCEEEEEECSSSEEEEECCCS--CCSTTTTSCC
T ss_pred eEEEEcCCEEEEEEEeCCccceeeEccc----------CceEEecCCceEEEEEEeCCCEEEEEEccc--ccCcCccCCe
Confidence 45667788888887642 244332111 01111 1232 36888999999999985 5665 499
Q ss_pred EEEEEeCC
Q 020799 242 LAINVTGT 249 (321)
Q Consensus 242 l~I~V~~~ 249 (321)
+.|.|...
T Consensus 258 ~~v~vvs~ 265 (298)
T 3hb3_B 258 IVVKAVSQ 265 (298)
T ss_dssp EEEEEECH
T ss_pred eEEEEEcH
Confidence 99998865
No 131
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=30.42 E-value=57 Score=32.51 Aligned_cols=76 Identities=12% Similarity=0.123 Sum_probs=48.2
Q ss_pred cceeEeCCEEEEeecCCC----CcEEE----eCc-ccccc-cc-CCCCcccccC-CC---eEEEeecCeeEEEEcCCCCC
Q 020799 171 FYSFFVCDTLVFNFANGT----QDVAI----VPK-DVYET-CN-INSTIAVFTS-SP---VKITLKFPGEYYFTSTYLSH 235 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~~----h~V~~----V~~-~~y~~-C~-~~~p~~~~~~-G~---~~v~L~~~G~~yFic~~~~H 235 (321)
..+++.||+|+.++.+.. ++++- +.. ...|- -. +-.+| .- |. -.++++++|++||=|-...|
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I---~P~G~~~~Y~f~~~q~GT~wYH~H~~~q 144 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPI---PPKGGQRTYRWRARQYGTSWYHSHFSAQ 144 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCB---CTTTEEEEEEEECCSCEEEEEEECSTTG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCcc---CCCCCeEEEEEECCCCEEEEEEEcccch
Confidence 478899999999886432 44432 110 11110 00 00011 22 33 26888999999999999888
Q ss_pred CCCCCeEEEEEeCC
Q 020799 236 CSLGQRLAINVTGT 249 (321)
Q Consensus 236 C~~GmKl~I~V~~~ 249 (321)
=..||--.+.|...
T Consensus 145 ~~~Gl~G~liV~~~ 158 (559)
T 2q9o_A 145 YGNGVVGTIQINGP 158 (559)
T ss_dssp GGGTCEEEEEEECC
T ss_pred hcCCceEEEEecCC
Confidence 88899999988754
No 132
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=30.41 E-value=35 Score=30.17 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=24.4
Q ss_pred cEEEecccccEEEEecCccccccC---ceeEEEec
Q 020799 97 AEFSLEAAGDYYFICTLELHCTLG---QKLAIHVT 128 (321)
Q Consensus 97 ~~v~L~~~G~~yFic~~~~HC~~G---mKl~I~V~ 128 (321)
..++.+++|.||..|+. -|..| |++.|.|.
T Consensus 83 l~~~~~~pG~y~g~CsE--~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 83 LHLIANEPGTYDGICAE--ICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEECCSSSEEEEEEECS--CCSTTSTTCCEEEEEE
T ss_pred EEEEeCCCeEEEEEccc--ccccchhhceEEEEEE
Confidence 36778899999999986 57654 99998887
No 133
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=29.90 E-value=16 Score=28.15 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=17.6
Q ss_pred cCCCeeEeCCEEEEEecCCCccEEEe
Q 020799 50 ASMQTFSVGDILLFNFTTGQQDVASV 75 (321)
Q Consensus 50 as~~~F~vGD~LvF~y~~~~hsV~~v 75 (321)
+..+..++||.|+|+|... +.+.|
T Consensus 73 v~~~~L~~GD~lvF~~~~~--~~f~V 96 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD--RTFYV 96 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS--SEEEE
T ss_pred HHHcCCCCCCEEEEEEcCC--CeEEE
Confidence 4467889999999999753 33444
No 134
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=29.73 E-value=43 Score=30.42 Aligned_cols=66 Identities=9% Similarity=0.130 Sum_probs=40.8
Q ss_pred cceeEeCCEEEEeecCC--CCcEEEeCccccccccCCCCcccc-cCC---CeEEEeecCeeEEEEcCCCCCCCCC---Ce
Q 020799 171 FYSFFVCDTLVFNFANG--TQDVAIVPKDVYETCNINSTIAVF-TSS---PVKITLKFPGEYYFTSTYLSHCSLG---QR 241 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~--~h~V~~V~~~~y~~C~~~~p~~~~-~~G---~~~v~L~~~G~~yFic~~~~HC~~G---mK 241 (321)
...+.+|+.+.|.-.+. .|+...-+.. ++.. -.| ...++.+++|.||..|+. -|..| |+
T Consensus 172 ~l~lP~g~~v~~~~tS~DViHsf~ip~l~----------~k~da~PG~~n~~~~~~~~~G~y~g~Cse--~CG~~H~~M~ 239 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGADVIHSWTVPAFG----------VKQDAVPGRLAQLWFRAEREGIFFGQCSE--LCGISHAYMP 239 (262)
T ss_dssp CEEEETTSEEEEEEEESSSCEEEEEGGGT----------EEEEECBTCCEEEEEECCSCEEEEECCCS--CCSTTGGGCC
T ss_pred eEEEecCCEEEEEEEECcccceeeecccC----------ceEEecCCceeEEEEecCCcEEEEEEChH--hcccCcccCe
Confidence 45677788888877642 2333321110 1110 112 236888999999999984 67765 89
Q ss_pred EEEEEeC
Q 020799 242 LAINVTG 248 (321)
Q Consensus 242 l~I~V~~ 248 (321)
+.|.|..
T Consensus 240 ~~v~vv~ 246 (262)
T 2gsm_B 240 ITVKVVS 246 (262)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 8888875
No 135
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=29.31 E-value=97 Score=30.63 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=48.6
Q ss_pred cceeEeCCEEEEeecCCC----CcEEE----eCccc-ccccc--CCCCcccccCCC---eEEEeecCeeEEEEcCCCCCC
Q 020799 171 FYSFFVCDTLVFNFANGT----QDVAI----VPKDV-YETCN--INSTIAVFTSSP---VKITLKFPGEYYFTSTYLSHC 236 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~~----h~V~~----V~~~~-y~~C~--~~~p~~~~~~G~---~~v~L~~~G~~yFic~~~~HC 236 (321)
..+++.||+|+.++.+.. ++++- +.... .|-=. +-.+| .-|. -.++++++|++||=|-...+=
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I---~PG~s~tY~f~~~~~GT~wYHsH~~~q~ 111 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAI---NPGETFFYNFTVDNPGTFFYHGHLGMQR 111 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECCSCEEEEEEECSTTTG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCc---CCCCeEEEEEECCCCEEEEEEECchhHH
Confidence 478999999999886432 33332 11110 11000 00112 2233 267889999999999998888
Q ss_pred CCCCeEEEEEeCCC
Q 020799 237 SLGQRLAINVTGTS 250 (321)
Q Consensus 237 ~~GmKl~I~V~~~~ 250 (321)
..||--.|.|....
T Consensus 112 ~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 112 SAGLYGSLIVDPPQ 125 (552)
T ss_dssp GGTCEEEEEEECCT
T ss_pred hccCeeeEEEeCCc
Confidence 88999999998753
No 136
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=28.79 E-value=23 Score=29.32 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=18.9
Q ss_pred cCCCeeEeCCEEEEEecCCCccEEEe
Q 020799 50 ASMQTFSVGDILLFNFTTGQQDVASV 75 (321)
Q Consensus 50 as~~~F~vGD~LvF~y~~~~hsV~~v 75 (321)
+..+.+++||.++|.+.....-+++|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 44678999999999998643335554
No 137
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=28.60 E-value=1e+02 Score=28.53 Aligned_cols=29 Identities=24% Similarity=0.495 Sum_probs=26.3
Q ss_pred cccccEEEEecCccccccCceeEEEecCC
Q 020799 102 EAAGDYYFICTLELHCTLGQKLAIHVTGP 130 (321)
Q Consensus 102 ~~~G~~yFic~~~~HC~~GmKl~I~V~~~ 130 (321)
+.+|.++|-|-+..|=+.||...+.|...
T Consensus 279 ~~pG~w~~HCHi~~H~~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 279 VGAGAWMYHCHVQSHSDMGMVGLFLVKKP 307 (343)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred CCCeeEEEeCCCHHHHhccCcEEEEEecC
Confidence 46899999999999999999999999864
No 138
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=28.47 E-value=9.6 Score=34.99 Aligned_cols=33 Identities=15% Similarity=0.325 Sum_probs=20.4
Q ss_pred cEEEecccccEEEEecCccccccCceeEEEecC
Q 020799 97 AEFSLEAAGDYYFICTLELHCTLGQKLAIHVTG 129 (321)
Q Consensus 97 ~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~~ 129 (321)
..|+.+++|.++|.|-+..|-..||...+.|..
T Consensus 268 v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 268 ANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp --------CCCCCBCCSTTTGGGTCBCCC----
T ss_pred EEEEcCCCeEEEEEeCChHHHhcCCeEEEEEec
Confidence 356677899999999999999999999888874
No 139
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=27.94 E-value=82 Score=31.18 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=48.3
Q ss_pred CCeeEeCCEEEEEecCCCc----cE-----EEeCcccccc-cCC-CCCCCccCCCC---cEEEec-ccccEEEEecCccc
Q 020799 52 MQTFSVGDILLFNFTTGQQ----DV-----ASVTKEAYEN-CNP-ASPISRKTTGP---AEFSLE-AAGDYYFICTLELH 116 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~~h----sV-----~~v~~~~Y~~-C~~-~~~~~~~~~G~---~~v~L~-~~G~~yFic~~~~H 116 (321)
..+++.||+|+.++.+... ++ .+-.....|. -.. ..+ ...|. .+|+++ +.|++||=|-...|
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~p---I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q 111 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCP---IAPGSTMLYNFTVDYNVGTYWYHSHTDGQ 111 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCC---BCTTCEEEEEEECSSCCEEEEEECCSSSG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCC---cCCCCeEEEEEEeCccceeEEEEEcCccc
Confidence 4578999999999876432 22 2210011111 000 011 22233 367777 88999999999888
Q ss_pred cccCceeEEEecCC
Q 020799 117 CTLGQKLAIHVTGP 130 (321)
Q Consensus 117 C~~GmKl~I~V~~~ 130 (321)
=..||.-.+.|..+
T Consensus 112 ~~~Gl~G~liV~~~ 125 (534)
T 1zpu_A 112 YEDGMKGLFIIKDD 125 (534)
T ss_dssp GGGTCEEEEEEECT
T ss_pred ccCcceeeEEeCCC
Confidence 88999999999875
No 140
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=27.09 E-value=42 Score=29.82 Aligned_cols=30 Identities=17% Similarity=0.342 Sum_probs=24.6
Q ss_pred EEEeecCeeEEEEcCCCCCCCCC---CeEEEEEeC
Q 020799 217 KITLKFPGEYYFTSTYLSHCSLG---QRLAINVTG 248 (321)
Q Consensus 217 ~v~L~~~G~~yFic~~~~HC~~G---mKl~I~V~~ 248 (321)
.++.+++|.||..|+. -|..| |.+.|.|..
T Consensus 183 ~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCSE--ICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEehh--hcccccccCeEEEEEEc
Confidence 5778899999999975 77776 888888764
No 141
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=26.78 E-value=90 Score=31.49 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=46.5
Q ss_pred cceeEeCCEEEEeecCCC----CcEE-----EeCccccccc--cCCCCcccccCCC---eEEEeecCeeEEEEcCCCCCC
Q 020799 171 FYSFFVCDTLVFNFANGT----QDVA-----IVPKDVYETC--NINSTIAVFTSSP---VKITLKFPGEYYFTSTYLSHC 236 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~~----h~V~-----~V~~~~y~~C--~~~~p~~~~~~G~---~~v~L~~~G~~yFic~~~~HC 236 (321)
..+++.||+|+.+..+.. ++++ +-.....|-= .+--+| ..|. -+|+++++|++||=|-...+=
T Consensus 99 ~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI---~PG~sftY~f~~~q~GT~WYHsH~~~q~ 175 (580)
T 3sqr_A 99 AIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPI---APGDTLTYKFQVTQYGTTWYHSHFSLQY 175 (580)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECCCCEEEEEEECSTTGG
T ss_pred eEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCC---CCCCeEEEEEECCCCcceEEeecccccc
Confidence 378899999988886532 2222 2100000100 000112 2233 268889999999999988887
Q ss_pred CCCCeEEEEEeCC
Q 020799 237 SLGQRLAINVTGT 249 (321)
Q Consensus 237 ~~GmKl~I~V~~~ 249 (321)
..|+.-.|.|...
T Consensus 176 ~~GL~G~lIV~~p 188 (580)
T 3sqr_A 176 GDGLFGPLIINGP 188 (580)
T ss_dssp GGTCEEEEEEECC
T ss_pred cCcCEEEEEeeCc
Confidence 8899888888754
No 142
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=26.61 E-value=97 Score=30.64 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=48.4
Q ss_pred cceeEeCCEEEEeecCCCC----cEE-----EeCcccccc-cc-CCCCcccccCCC---eEEEee-cCeeEEEEcCCCCC
Q 020799 171 FYSFFVCDTLVFNFANGTQ----DVA-----IVPKDVYET-CN-INSTIAVFTSSP---VKITLK-FPGEYYFTSTYLSH 235 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~~h----~V~-----~V~~~~y~~-C~-~~~p~~~~~~G~---~~v~L~-~~G~~yFic~~~~H 235 (321)
..+++.||+|+.++.+... +++ +-.....|- -. +-.+| ..|. -.++++ ++|++||-|-...+
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI---~PG~~~~Y~f~~~~~~GT~wYH~H~~~q 111 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPI---APGSTMLYNFTVDYNVGTYWYHSHTDGQ 111 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECSSCCEEEEEECCSSSG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCc---CCCCeEEEEEEeCccceeEEEEEcCccc
Confidence 4789999999999875432 222 110001110 00 00112 2233 267887 89999999999888
Q ss_pred CCCCCeEEEEEeCCC
Q 020799 236 CSLGQRLAINVTGTS 250 (321)
Q Consensus 236 C~~GmKl~I~V~~~~ 250 (321)
-..|+.-.+.|....
T Consensus 112 ~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 112 YEDGMKGLFIIKDDS 126 (534)
T ss_dssp GGGTCEEEEEEECTT
T ss_pred ccCcceeeEEeCCCC
Confidence 888999999998653
No 143
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=26.60 E-value=23 Score=27.20 Aligned_cols=19 Identities=11% Similarity=-0.017 Sum_probs=16.1
Q ss_pred cccceeEeCCEEEEeecCC
Q 020799 169 ASFYSFFVCDTLVFNFANG 187 (321)
Q Consensus 169 a~~~~F~vGD~LvF~y~~~ 187 (321)
+..+..++||.|+|+|...
T Consensus 73 v~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS
T ss_pred HHHcCCCCCCEEEEEEcCC
Confidence 4578999999999999753
No 144
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=26.30 E-value=86 Score=30.83 Aligned_cols=76 Identities=17% Similarity=0.195 Sum_probs=47.1
Q ss_pred CCeeEeCCEEEEEecCCC--------ccEEE--eCc---ccccccC--CCCCCCccCCCC---cEEEe-cccccEEEEec
Q 020799 52 MQTFSVGDILLFNFTTGQ--------QDVAS--VTK---EAYENCN--PASPISRKTTGP---AEFSL-EAAGDYYFICT 112 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~~--------hsV~~--v~~---~~Y~~C~--~~~~~~~~~~G~---~~v~L-~~~G~~yFic~ 112 (321)
..+++.||+|+.++.+.. +++.- +.+ ...|.=. ...+ ...|. .+|++ ++.|++||=|-
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~p---I~PG~sftY~f~~~~~~GT~wYHsH 112 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCP---IIVGNSFSYNFNVPGMAGTYWYHSH 112 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCC---BCTTCEEEEEEECTTCCEEEEEEEC
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCC---CCCCCeEEEEEEeCCCCceeeeecc
Confidence 357899999999886542 23321 111 1111100 0011 22233 36777 67899999999
Q ss_pred CccccccCceeEEEecCC
Q 020799 113 LELHCTLGQKLAIHVTGP 130 (321)
Q Consensus 113 ~~~HC~~GmKl~I~V~~~ 130 (321)
...+=..||.-.|.|..+
T Consensus 113 ~~~q~~~GL~G~lIV~~~ 130 (495)
T 3t6v_A 113 LTTQYCDGLRGPFVVYDP 130 (495)
T ss_dssp STTGGGGTCEEEEEEECT
T ss_pred chhHHhcCceEEEEEcCc
Confidence 988888999999999764
No 145
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=25.74 E-value=41 Score=31.26 Aligned_cols=31 Identities=19% Similarity=0.437 Sum_probs=25.4
Q ss_pred cEEEecccccEEEEecCcccccc---CceeEEEecC
Q 020799 97 AEFSLEAAGDYYFICTLELHCTL---GQKLAIHVTG 129 (321)
Q Consensus 97 ~~v~L~~~G~~yFic~~~~HC~~---GmKl~I~V~~ 129 (321)
..++.+++|.||..|+. -|.. .|++.|.|.+
T Consensus 231 ~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 231 LWFSVDQEGVYFGQCSE--LCGINHAYMPIVVKAVS 264 (298)
T ss_dssp EEEECSSSEEEEECCCS--CCSTTTTSCCEEEEEEC
T ss_pred EEEEeCCCEEEEEEccc--ccCcCccCCeeEEEEEc
Confidence 36788999999999996 5654 4999999885
No 146
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=25.65 E-value=1.1e+02 Score=30.94 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=29.6
Q ss_pred cEEEecccccEEEEecCccccccCceeEEEecCC
Q 020799 97 AEFSLEAAGDYYFICTLELHCTLGQKLAIHVTGP 130 (321)
Q Consensus 97 ~~v~L~~~G~~yFic~~~~HC~~GmKl~I~V~~~ 130 (321)
.+|++++.|++||=|-...+=..|+.-.|.|..+
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p 188 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGP 188 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCc
Confidence 3788889999999999988888999999999864
No 147
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=25.55 E-value=25 Score=27.95 Aligned_cols=11 Identities=36% Similarity=0.869 Sum_probs=10.0
Q ss_pred CeeEeCCEEEE
Q 020799 53 QTFSVGDILLF 63 (321)
Q Consensus 53 ~~F~vGD~LvF 63 (321)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 47899999999
No 148
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=24.96 E-value=93 Score=30.63 Aligned_cols=76 Identities=16% Similarity=0.279 Sum_probs=47.1
Q ss_pred CCeeEeCCEEEEEecCCC--------ccEEE--eCc---ccccccC--CCCCCCccCCCC---cEEEe-cccccEEEEec
Q 020799 52 MQTFSVGDILLFNFTTGQ--------QDVAS--VTK---EAYENCN--PASPISRKTTGP---AEFSL-EAAGDYYFICT 112 (321)
Q Consensus 52 ~~~F~vGD~LvF~y~~~~--------hsV~~--v~~---~~Y~~C~--~~~~~~~~~~G~---~~v~L-~~~G~~yFic~ 112 (321)
..+++.||+|+.++.+.. +++.- +.+ ...|.=. ...+ ...|. .+|++ ++.|++||=|-
T Consensus 35 ~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~p---I~PG~s~tY~f~~~~~~GT~wYHsH 111 (499)
T 3pxl_A 35 LVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCP---ISPGHSFLYDFQVPDQAGTFWYHSH 111 (499)
T ss_dssp CEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCC---BCTTCEEEEEEECSSCCEEEEEEEC
T ss_pred eEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCC---CCCCCeEEEEEEcCCCCceeeeecc
Confidence 357899999999886542 23321 110 1111100 0001 22333 36777 56899999999
Q ss_pred CccccccCceeEEEecCC
Q 020799 113 LELHCTLGQKLAIHVTGP 130 (321)
Q Consensus 113 ~~~HC~~GmKl~I~V~~~ 130 (321)
...+=..||.-.|.|..+
T Consensus 112 ~~~q~~~GL~G~lIV~~~ 129 (499)
T 3pxl_A 112 LSTQYCDGLRGPFVVYDP 129 (499)
T ss_dssp STTGGGGTCEEEEEEECT
T ss_pred chhHHhccceeEEEEcCC
Confidence 988888999999999864
No 149
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=24.56 E-value=46 Score=30.26 Aligned_cols=31 Identities=19% Similarity=0.433 Sum_probs=25.0
Q ss_pred cEEEecccccEEEEecCccccccC---ceeEEEecC
Q 020799 97 AEFSLEAAGDYYFICTLELHCTLG---QKLAIHVTG 129 (321)
Q Consensus 97 ~~v~L~~~G~~yFic~~~~HC~~G---mKl~I~V~~ 129 (321)
..++.+++|.||..|+. -|..| |++.|.|.+
T Consensus 213 ~~~~~~~~G~y~g~Cse--~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 213 LWFRAEREGIFFGQCSE--LCGISHAYMPITVKVVS 246 (262)
T ss_dssp EEEECCSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEEecCCcEEEEEEChH--hcccCcccCeEEEEEEc
Confidence 36788999999999996 57655 888888874
No 150
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=23.15 E-value=1.1e+02 Score=30.10 Aligned_cols=77 Identities=13% Similarity=0.100 Sum_probs=47.4
Q ss_pred cceeEeCCEEEEeecCCC--------CcEEE--eCc---ccccccc--CCCCcccccCCC---eEEEe-ecCeeEEEEcC
Q 020799 171 FYSFFVCDTLVFNFANGT--------QDVAI--VPK---DVYETCN--INSTIAVFTSSP---VKITL-KFPGEYYFTST 231 (321)
Q Consensus 171 ~~~F~vGD~LvF~y~~~~--------h~V~~--V~~---~~y~~C~--~~~p~~~~~~G~---~~v~L-~~~G~~yFic~ 231 (321)
..+++.||+|+.+..+.. ++++- +.+ ...|-=. +-.+| ..|. -.|++ +++|++||-|-
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI---~PG~sftY~f~~~~~~GT~wYHsH 112 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPI---IVGNSFSYNFNVPGMAGTYWYHSH 112 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCB---CTTCEEEEEEECTTCCEEEEEEEC
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCC---CCCCeEEEEEEeCCCCceeeeecc
Confidence 478999999999886532 23332 110 0111000 00012 2233 26777 67999999999
Q ss_pred CCCCCCCCCeEEEEEeCCC
Q 020799 232 YLSHCSLGQRLAINVTGTS 250 (321)
Q Consensus 232 ~~~HC~~GmKl~I~V~~~~ 250 (321)
...+=..|+.-.|.|....
T Consensus 113 ~~~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 113 LTTQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp STTGGGGTCEEEEEEECTT
T ss_pred chhHHhcCceEEEEEcCcc
Confidence 8888788999999997543
No 151
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=22.96 E-value=45 Score=29.65 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=24.4
Q ss_pred EEEecccccEEEEecCccccccC---ceeEEEecC
Q 020799 98 EFSLEAAGDYYFICTLELHCTLG---QKLAIHVTG 129 (321)
Q Consensus 98 ~v~L~~~G~~yFic~~~~HC~~G---mKl~I~V~~ 129 (321)
.++.+++|.||..|+. -|..| |.+.|.|.+
T Consensus 183 ~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCSE--ICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEehh--hcccccccCeEEEEEEc
Confidence 6778999999999986 57655 888888874
No 152
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=22.65 E-value=1.2e+02 Score=29.93 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=28.6
Q ss_pred EEEe-ecCeeEEEEcCCCCCCCCCCeEEEEEeCCC
Q 020799 217 KITL-KFPGEYYFTSTYLSHCSLGQRLAINVTGTS 250 (321)
Q Consensus 217 ~v~L-~~~G~~yFic~~~~HC~~GmKl~I~V~~~~ 250 (321)
.|++ +++|++||-|-...+=..|+.-.|.|....
T Consensus 96 ~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 96 DFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN 130 (499)
T ss_dssp EEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEcCCCCceeeeeccchhHHhccceeEEEEcCCc
Confidence 6777 679999999998887788999999997543
No 153
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=22.53 E-value=21 Score=28.58 Aligned_cols=12 Identities=33% Similarity=0.728 Sum_probs=10.3
Q ss_pred CeeEeCCEEEEE
Q 020799 53 QTFSVGDILLFN 64 (321)
Q Consensus 53 ~~F~vGD~LvF~ 64 (321)
+.+++||+|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 478999999994
No 154
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=21.79 E-value=75 Score=30.67 Aligned_cols=70 Identities=9% Similarity=0.050 Sum_probs=46.7
Q ss_pred CeeEeCCEEEEEecCC---CccEEE----eCccccc---ccCCCCCCCccCCCC---cEEEecc-cccEEEEecC----c
Q 020799 53 QTFSVGDILLFNFTTG---QQDVAS----VTKEAYE---NCNPASPISRKTTGP---AEFSLEA-AGDYYFICTL----E 114 (321)
Q Consensus 53 ~~F~vGD~LvF~y~~~---~hsV~~----v~~~~Y~---~C~~~~~~~~~~~G~---~~v~L~~-~G~~yFic~~----~ 114 (321)
.+++.||+|+.++.+. .+++.- +.. +.| .|. ...|. .+|++++ .|++||=|-. .
T Consensus 52 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~-~~DG~~~~~-------i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~ 123 (451)
T 2uxt_A 52 IRVWKGDDVKLIYSNRLTENVSMTVAGLQVPG-PLMGGPARM-------MSPNADWAPVLPIRQNAATLWYHANTPNRTA 123 (451)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCG-GGSCSGGGC-------BCTTCEECCEEECCSCSEEEEEEECCTTTHH
T ss_pred EEEeCCCEEEEEEEECCCCCccEEECCccCCC-CCCCCCcCc-------CCCCCeEEEEEEcCCCCcceEEecCCCCchh
Confidence 4678999999998764 334421 111 112 122 22232 4788886 8999999998 5
Q ss_pred cccccCceeEEEecCC
Q 020799 115 LHCTLGQKLAIHVTGP 130 (321)
Q Consensus 115 ~HC~~GmKl~I~V~~~ 130 (321)
.|=..||--.+.|..+
T Consensus 124 ~q~~~Gl~G~liV~~~ 139 (451)
T 2uxt_A 124 QQVYNGLAGMWLVEDE 139 (451)
T ss_dssp HHHHTTCEEEEEEECH
T ss_pred hhHhhcceEEEEEecC
Confidence 5777999999999864
Done!