BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020802
(321 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2YIJ|A Chain A, Crystal Structure Of Phospholipase A1
pdb|2YIJ|B Chain B, Crystal Structure Of Phospholipase A1
Length = 419
Score = 234 bits (596), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/286 (44%), Positives = 169/286 (59%), Gaps = 12/286 (4%)
Query: 7 ADNWKELSGSNNWDGLLKPLNINLRRYIIHYGERAQANYDSFNDETISKMYGFPRYAPED 66
A W++LSG N+W G L+PL+ +LR YIIHYGE AQA YD+FN T S+ G Y+ +D
Sbjct: 20 AKRWRDLSGQNHWKGXLQPLDQDLREYIIHYGEXAQAGYDTFNINTESQFAGASIYSRKD 79
Query: 67 FFYHVALHNGNPY-KYTVTNYLYGRSDTDLSDWVL---------PDQSAWIGYVAVATDE 116
FF V L +PY KY VT ++Y SD + + L +S W GYVAV D+
Sbjct: 80 FFAKVGLEIAHPYTKYKVTKFIYATSDIHVPESFLLFPISREGWSKESNWXGYVAVTDDQ 139
Query: 117 GKTLLGRRDILISWRGTQSAAEWFKDFQFPLTPASDLFGDTYDPTPMVHLGFHSLYVQSN 176
G LLGRRDI++SWRG+ EW +DF+F L A +FG+ D +H G++S+Y +
Sbjct: 140 GTALLGRRDIVVSWRGSVQPLEWVEDFEFGLVNAIKIFGERNDQV-QIHQGWYSIYXSQD 198
Query: 177 PDSTYCKFSAKDQVRSAVRTLVDKYGDEEMSITVIGHSLGSXXXXXXXXXXXXXGYNKPT 236
S + K +A+DQV V L++KY DEE+SIT+ GHSLG+ GYN+P
Sbjct: 199 ERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDIVANGYNRPK 258
Query: 237 GSDTASGCMVTTIVFASPRVGDSAFKTAFEDQKLLRLLRITNKNDI 282
S C VT VFASPRVGDS F+ F + +R+LR N D+
Sbjct: 259 SRPDKS-CPVTAFVFASPRVGDSDFRKLFSGLEDIRVLRTRNLPDV 303
>pdb|1DT3|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT3|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|E Chain E, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|F Chain F, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|G Chain G, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|H Chain H, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DU4|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1EIN|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1TIB|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|4DYH|A Chain A, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4DYH|B Chain B, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4EA6|A Chain A, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4EA6|B Chain B, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4FLF|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4FLF|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4GBG|A Chain A, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GBG|B Chain B, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GI1|A Chain A, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GI1|B Chain B, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GLB|A Chain A, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GLB|B Chain B, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GWL|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GWL|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GHW|A Chain A, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
pdb|4GHW|B Chain B, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
Length = 269
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 60/157 (38%), Gaps = 30/157 (19%)
Query: 126 ILISWRGTQSAAEWFKDFQFPLTPASDLFGDTYDPTPMVHLGFHSLYVQSNPDSTYCKFS 185
I++S+RG++S W + F L +D+ H GF S + S
Sbjct: 76 IVLSFRGSRSIENWIGNLNFDLKEINDICSGCRG-----HDGFTSSWR-----------S 119
Query: 186 AKDQVRSAVRTLVDKYGDEEMSITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCM 245
D +R V V ++ D + T GHSLG GY+
Sbjct: 120 VADTLRQKVEDAVREHPDYRVVFT--GHSLGGALATVAGADLRGNGYD------------ 165
Query: 246 VTTIVFASPRVGDSAFKTAFEDQKLLRLLRITNKNDI 282
+ + +PRVG+ AF Q L RIT+ NDI
Sbjct: 166 IDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDI 202
>pdb|1GT6|A Chain A, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
pdb|1GT6|B Chain B, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
Length = 269
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 30/157 (19%)
Query: 126 ILISWRGTQSAAEWFKDFQFPLTPASDLFGDTYDPTPMVHLGFHSLYVQSNPDSTYCKFS 185
I++S+RG++S W + F L +D+ H GF S + S
Sbjct: 76 IVLSFRGSRSIENWIGNLNFDLKEINDICSGCRG-----HDGFTSSWR-----------S 119
Query: 186 AKDQVRSAVRTLVDKYGDEEMSITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCM 245
D +R V V ++ D + T GH+LG GY+
Sbjct: 120 VADTLRQKVEDAVREHPDYRVVFT--GHALGGALATVAGADLRGNGYD------------ 165
Query: 246 VTTIVFASPRVGDSAFKTAFEDQKLLRLLRITNKNDI 282
+ + +PRVG+ AF Q L RIT+ NDI
Sbjct: 166 IDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDI 202
>pdb|2HL6|A Chain A, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2HL6|B Chain B, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2IX9|A Chain A, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
pdb|2IX9|B Chain B, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
Length = 260
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 75/202 (37%), Gaps = 62/202 (30%)
Query: 91 SDTDLSDWVLPDQSAWIGYVAVATDEGKTLLGRRDILISWRGTQSAAEWFKDFQFPLTPA 150
+ TD++ W+L D ++ ++I+ +RGT S D + LTP
Sbjct: 44 AQTDINGWILRDDTS------------------KEIITVFRGTGSDTNLQLDTNYTLTP- 84
Query: 151 SDLFGDTYDPTPM-----VHLGFHSLYVQSNPDSTYCKFSAKDQVRSAVRTLVDKYGDEE 205
+D P VH G++ ++ S +DQV S V+ +Y D
Sbjct: 85 -------FDTLPQCNDCEVHGGYYIGWI-----------SVQDQVESLVKQQASQYPD-- 124
Query: 206 MSITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCMVTTIVFASPRVGDSAFKTAF 265
++TV GHSLG+ N V F PR G+ AF +
Sbjct: 125 YALTVTGHSLGASMAALTAAQLSATYDN------------VRLYTFGEPRSGNQAFASYM 172
Query: 266 EDQ------KLLRLLRITNKND 281
D + + R+T+ ND
Sbjct: 173 NDAFQVSSPETTQYFRVTHSND 194
>pdb|1USW|A Chain A, Crystal Structure Of Ferulic Acid Esterase From
Aspergillus Niger
Length = 260
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 75/203 (36%), Gaps = 62/203 (30%)
Query: 90 RSDTDLSDWVLPDQSAWIGYVAVATDEGKTLLGRRDILISWRGTQSAAEWFKDFQFPLTP 149
+ TD++ W+L D ++ ++I+ +RGT S D + LTP
Sbjct: 43 NAQTDINGWILRDDTS------------------KEIITVFRGTGSDTNLQLDTNYTLTP 84
Query: 150 ASDLFGDTYDPTPM-----VHLGFHSLYVQSNPDSTYCKFSAKDQVRSAVRTLVDKYGDE 204
+D P VH G++ ++ S +DQV S V+ +Y D
Sbjct: 85 --------FDTLPQCNDCEVHGGYYIGWI-----------SVQDQVESLVKQQASQYPD- 124
Query: 205 EMSITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCMVTTIVFASPRVGDSAFKTA 264
++TV GHSLG+ N V F PR G+ AF +
Sbjct: 125 -YALTVTGHSLGASMAALTAAQLSATYDN------------VRLYTFGEPRSGNQAFASY 171
Query: 265 FEDQ------KLLRLLRITNKND 281
D + + R+T+ ND
Sbjct: 172 MNDAFQVSSPETTQYFRVTHSND 194
>pdb|1UWC|A Chain A, Feruloyl Esterase From Aspergillus Niger
pdb|1UWC|B Chain B, Feruloyl Esterase From Aspergillus Niger
pdb|1UZA|A Chain A, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
pdb|1UZA|B Chain B, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
Length = 261
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 75/202 (37%), Gaps = 62/202 (30%)
Query: 91 SDTDLSDWVLPDQSAWIGYVAVATDEGKTLLGRRDILISWRGTQSAAEWFKDFQFPLTPA 150
+ TD++ W+L D ++ ++I+ +RGT S D + LTP
Sbjct: 44 AQTDINGWILRDDTS------------------KEIITVFRGTGSDTNLQLDTNYTLTP- 84
Query: 151 SDLFGDTYDPTPM-----VHLGFHSLYVQSNPDSTYCKFSAKDQVRSAVRTLVDKYGDEE 205
+D P VH G++ ++ S +DQV S V+ +Y D
Sbjct: 85 -------FDTLPQCNDCEVHGGYYIGWI-----------SVQDQVESLVKQQASQYPD-- 124
Query: 206 MSITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCMVTTIVFASPRVGDSAFKTAF 265
++TV GHSLG+ N V F PR G+ AF +
Sbjct: 125 YALTVTGHSLGASMAALTAAQLSATYDN------------VRLYTFGEPRSGNQAFASYM 172
Query: 266 EDQ------KLLRLLRITNKND 281
D + + R+T+ ND
Sbjct: 173 NDAFQVSSPETTQYFRVTHSND 194
>pdb|2BJH|A Chain A, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|B Chain B, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|C Chain C, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
Length = 260
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 75/203 (36%), Gaps = 62/203 (30%)
Query: 90 RSDTDLSDWVLPDQSAWIGYVAVATDEGKTLLGRRDILISWRGTQSAAEWFKDFQFPLTP 149
+ TD++ W+L D ++ ++I+ +RGT S D + LTP
Sbjct: 43 NAQTDINGWILRDDTS------------------KEIITVFRGTGSDTNLQLDTNYTLTP 84
Query: 150 ASDLFGDTYDPTPM-----VHLGFHSLYVQSNPDSTYCKFSAKDQVRSAVRTLVDKYGDE 204
+D P VH G++ ++ S +DQV S V+ +Y D
Sbjct: 85 --------FDTLPQCNDCEVHGGYYIGWI-----------SVQDQVESLVKQQASQYPD- 124
Query: 205 EMSITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCMVTTIVFASPRVGDSAFKTA 264
++TV GH+LG+ N V F PR G+ AF +
Sbjct: 125 -YALTVTGHALGASMAALTAAQLSATYDN------------VRLYTFGEPRSGNQAFASY 171
Query: 265 FEDQ------KLLRLLRITNKND 281
D + + R+T+ ND
Sbjct: 172 MNDAFQVSSPETTQYFRVTHSND 194
>pdb|3TGL|A Chain A, Structure And Molecular Model Refinement Of Rhizomucor
Miehei Triacylglyceride Lipase: A Case Study Of The Use
Of Simulated Annealing In Partial Model Refinement
Length = 269
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 30/141 (21%)
Query: 123 RRDILISWRGTQSAAEWFKDFQFPLTPASDLFGDTYDPTP--MVHLGFHSLYVQSNPDST 180
+ I I +RG+ S W D F P S Y P VH GF Y +
Sbjct: 72 EKTIYIVFRGSSSIRNWIADLTF--VPVS------YPPVSGTKVHKGFLDSYGE------ 117
Query: 181 YCKFSAKDQVRSAVRTLVDKYGDEEMSITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDT 240
++++ + V +Y ++++T GHSLG Y + G +
Sbjct: 118 -----VQNELVATVLDQFKQYPSYKVAVT--GHSLGGATVLLCALDL----YQREEGLSS 166
Query: 241 ASGCMVTTIVFASPRVGDSAF 261
++ + T PRVGD AF
Sbjct: 167 SNLFLYTQ---GQPRVGDPAF 184
>pdb|2ORY|A Chain A, Crystal Structure Of M37 Lipase
pdb|2ORY|B Chain B, Crystal Structure Of M37 Lipase
Length = 346
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 191 RSAVRTLVDKYGDE-EMSITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCMVTTI 249
++ ++ L +K G E + I V GHS G G + ++TI
Sbjct: 150 KTILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALWLKDI-----QGVKLSQNIDISTI 204
Query: 250 VFASPRVGDSAFKTAFEDQKLLRLLRITNKNDI 282
FA P G++ F F+D + RI N DI
Sbjct: 205 PFAGPTAGNADFADYFDDCLGDQCTRIANSLDI 237
>pdb|3UUF|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 278
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 208 ITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCMVTTIVFASPRVGDSAFKTAFED 267
+TVIGHSLG+ G + T +F PR+G+ F +F D
Sbjct: 139 VTVIGHSLGAAMGLLCAMDIELR----------MDGGLYKTYLFGLPRLGNPTF-ASFVD 187
Query: 268 QKL 270
QK+
Sbjct: 188 QKI 190
>pdb|3UUE|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 279
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 208 ITVIGHSLGSXXXXXXXXXXXXXGYNKPTGSDTASGCMVTTIVFASPRVGDSAFKTAFED 267
+TVIGHSLG+ G + T +F PR+G+ F +F D
Sbjct: 140 VTVIGHSLGAAMGLLCAMDIELR----------MDGGLYKTYLFGLPRLGNPTF-ASFVD 188
Query: 268 QKL 270
QK+
Sbjct: 189 QKI 191
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,870,602
Number of Sequences: 62578
Number of extensions: 410413
Number of successful extensions: 772
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 762
Number of HSP's gapped (non-prelim): 18
length of query: 321
length of database: 14,973,337
effective HSP length: 99
effective length of query: 222
effective length of database: 8,778,115
effective search space: 1948741530
effective search space used: 1948741530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)