BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020804
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74031|FWDC_METWO Tungsten-containing formylmethanofuran dehydrogenase 2 subunit C
OS=Methanobacterium wolfei GN=fwdC PE=2 SV=1
Length = 270
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 116 NSKASPKETESGKWSCESDSEIRVLAEFKPGLITLDGHADDW--EDIDGSEFSLLPALDP 173
N+K +E +G+ + + V A K G IT++G+A W +D+ G E +L D
Sbjct: 75 NTKRIGQEMTAGEIIVRGNVNMYVGAGMKGGKITVEGNAGSWAGQDMRGGEIEILGDADD 134
Query: 174 HAEHEYKG 181
+ Y+G
Sbjct: 135 YVGSSYRG 142
>sp|P83555|KI3L1_MOUSE Killer cell immunoglobulin-like receptor 3DL1 OS=Mus musculus
GN=Kir3dl1 PE=2 SV=1
Length = 432
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 59 SPPMKAPTHRASPSLPSSTSNKGKHSNLILLFGIGTGLLITAIISVLII-CSCAFRRRNS 117
S P+ P P+ + + + NL +L TGLL+T ++ V+II SC F ++N
Sbjct: 309 SDPLYLPAKGNCPAYTEADTKTNNYKNLHIL----TGLLVTMVLVVIIIFYSCYFSKQN- 363
Query: 118 KASPKETESGKWSCESDSEIR 138
K + S E + E++
Sbjct: 364 ----KSQKQAAASMEQEYEVK 380
>sp|Q59579|FWDC_METTM Tungsten-containing formylmethanofuran dehydrogenase 2 subunit C
OS=Methanothermobacter marburgensis (strain DSM 2133 /
14651 / NBRC 100331 / OCM 82 / Marburg) GN=fwdC PE=2
SV=2
Length = 270
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 116 NSKASPKETESGKWSCESDSEIRVLAEFKPGLITLDGHADDW--EDIDGSEFSLLPALDP 173
N+K +E +G+ + + + V A K G IT++G+A W +D+ G E +L
Sbjct: 75 NTKRIGQEMTAGEILVKGNVNMYVGAGMKGGRITVEGNAASWAGQDMRGGELEILGNAAD 134
Query: 174 HAEHEYKG 181
+ Y+G
Sbjct: 135 YVGSSYRG 142
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 33.9 bits (76), Expect = 1.8, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 17/32 (53%)
Query: 47 EPPAPSQAPLASSPPMKAPTHRASPSLPSSTS 78
EPP PS PLASSP P RA P S S
Sbjct: 4994 EPPIPSPLPLASSPESARPKPRARPPEESEDS 5025
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 33.5 bits (75), Expect = 2.1, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 47 EPPAPSQAPLASSPPMKAPTHRASP 71
EPP PS PLASSP P RA P
Sbjct: 4943 EPPVPSPLPLASSPESARPKPRARP 4967
>sp|Q12866|MERTK_HUMAN Tyrosine-protein kinase Mer OS=Homo sapiens GN=MERTK PE=1 SV=2
Length = 999
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 59 SPPMKA--PTHRASPSLPSSTSNKGKHSNLILLFGIGTGLLITAIISVLIICSCAFRRRN 116
S P+K P H PSST G ++++FG G + +I +++ S A R+R
Sbjct: 473 SDPVKIFIPAHGWVDYAPSSTPAPGNADPVLIIFGCFCGFI---LIGLILYISLAIRKRV 529
Query: 117 SKASPKETESGKWSCESDSEIRV 139
+ET+ G E DSE+ V
Sbjct: 530 -----QETKFGNAFTEEDSELVV 547
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,571,931
Number of Sequences: 539616
Number of extensions: 6144966
Number of successful extensions: 18241
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 18181
Number of HSP's gapped (non-prelim): 83
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)