Query 020804
Match_columns 321
No_of_seqs 80 out of 82
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 08:25:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020804.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020804hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ivf_C Ethylbenzene dehydrogen 99.9 3.7E-22 1.3E-26 179.8 6.1 119 147-290 11-140 (214)
2 2k1k_A Ephrin type-A receptor 96.8 0.00021 7.4E-09 49.2 0.4 32 80-111 4-35 (38)
3 2ks1_B Epidermal growth factor 96.1 0.0014 4.7E-08 46.6 1.0 34 85-118 9-43 (44)
4 1i82_A Xylanase A, endo-1,4-be 96.1 0.0073 2.5E-07 50.6 5.4 90 140-234 2-94 (189)
5 2l2t_A Receptor tyrosine-prote 95.5 0.0031 1E-07 45.0 0.5 36 84-119 7-43 (44)
6 2jwa_A Receptor tyrosine-prote 95.3 0.0031 1E-07 45.0 0.0 32 87-118 12-43 (44)
7 1q55_A EP-cadherin, C-cadherin 92.4 0.024 8.3E-07 59.0 0.0 31 81-111 699-729 (880)
8 2k9y_A Ephrin type-A receptor 92.3 0.03 1E-06 37.7 0.4 14 86-99 12-25 (41)
9 2knc_A Integrin alpha-IIB; tra 90.2 0.1 3.4E-06 38.6 1.4 35 84-118 10-44 (54)
10 2l8s_A Integrin alpha-1; trans 88.0 0.13 4.5E-06 38.1 0.7 35 86-120 9-43 (54)
11 2klu_A T-cell surface glycopro 86.3 0.38 1.3E-05 37.3 2.4 30 92-121 12-42 (70)
12 2l34_A TYRO protein tyrosine k 82.7 0.26 8.7E-06 33.0 0.1 25 83-107 3-27 (33)
13 2k1a_A Integrin alpha-IIB; sin 80.8 0.51 1.7E-05 33.2 1.0 34 84-117 8-41 (42)
14 2llm_A Amyloid beta A4 protein 76.8 0.61 2.1E-05 33.2 0.0 27 85-111 15-41 (43)
15 2k9y_A Ephrin type-A receptor 73.2 1.2 4.1E-05 29.7 1.2 19 86-104 9-27 (41)
16 1cd1_A CD1, MCD1D.1; immunolog 72.7 0.74 2.5E-05 42.0 0.0 10 40-49 214-223 (315)
17 2jo1_A Phospholemman; FXYD1, N 68.1 2.2 7.5E-05 33.3 1.7 16 114-129 45-60 (72)
18 1s7q_A H-2KB, H-2 class I hist 65.1 1.3 4.5E-05 41.3 0.0 16 85-100 279-294 (348)
19 2jwa_A Receptor tyrosine-prote 64.1 2.1 7.2E-05 30.4 0.9 28 92-119 14-41 (44)
20 2ks1_B Epidermal growth factor 63.7 3.5 0.00012 29.1 2.0 31 89-119 10-41 (44)
21 2lp1_A C99; alzheimer'S D memb 63.4 2 6.8E-05 36.3 0.0 25 85-109 28-52 (122)
22 2l6w_A Beta-type platelet-deri 62.1 2.2 7.5E-05 29.9 0.0 17 102-118 21-37 (39)
23 2knc_B Integrin beta-3; transm 52.8 4.1 0.00014 31.5 0.8 12 85-96 9-20 (79)
24 2l2t_A Receptor tyrosine-prote 52.3 5.9 0.0002 28.1 1.5 29 91-119 11-40 (44)
25 1iij_A ERBB-2 receptor protein 51.9 4.5 0.00015 27.6 0.8 7 89-95 10-16 (35)
26 2knc_B Integrin beta-3; transm 50.0 1.4 4.9E-05 34.1 -2.2 24 89-113 10-33 (79)
27 3hd7_A Vesicle-associated memb 39.9 14 0.00048 28.7 2.1 18 93-110 73-90 (91)
28 3aqp_A Probable secdf protein- 39.9 6.4 0.00022 40.4 0.1 41 87-127 700-740 (741)
29 2jp3_A FXYD domain-containing 37.3 10 0.00034 29.2 0.8 9 90-98 20-28 (67)
30 1q55_A EP-cadherin, C-cadherin 37.2 7.1 0.00024 40.8 0.0 12 282-293 863-874 (880)
31 2kog_A Vesicle-associated memb 36.7 15 0.00052 30.1 1.9 18 93-110 101-118 (119)
32 2k9p_A Pheromone alpha factor 34.9 22 0.00076 27.7 2.5 15 89-103 24-38 (80)
33 2cqw_A Sushi domain containing 33.4 6.9 0.00023 31.2 -0.7 16 37-52 67-82 (84)
34 4grv_A Neurotensin receptor ty 30.6 11 0.00036 35.4 0.0 16 108-123 487-502 (510)
35 1q2j_A MU-conotoxin SMIIIA; HE 30.2 30 0.001 22.3 2.0 19 234-252 1-19 (26)
36 2zxe_G FXYD10, phospholemman-l 29.9 15 0.0005 28.8 0.7 8 90-97 22-29 (74)
37 1zza_A Stannin, AG8_1; helix, 29.2 39 0.0013 26.8 3.0 27 96-122 22-48 (90)
38 2k1k_A Ephrin type-A receptor 23.3 28 0.00095 23.6 1.0 11 92-102 12-22 (38)
39 3ug3_A Alpha-L-arabinofuranosi 21.5 24 0.00083 35.2 0.7 50 261-316 49-114 (504)
40 2k9j_B Integrin beta-3; transm 21.0 42 0.0014 23.2 1.6 12 85-96 8-19 (43)
No 1
>2ivf_C Ethylbenzene dehydrogenase gamma-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=99.85 E-value=3.7e-22 Score=179.82 Aligned_cols=119 Identities=21% Similarity=0.305 Sum_probs=107.7
Q ss_pred eeeecCCCCCcccccCcccccccc-----CCCCC-----CCCCCCCeeEEEEeecCccEEEEEEecCceeeecCC-cccC
Q 020804 147 LITLDGHADDWEDIDGSEFSLLPA-----LDPHA-----EHEYKGGKMNVKALHDGHDVYFLLQVDGEYVYSKGE-NTRC 215 (321)
Q Consensus 147 ~~tldg~~~dw~~i~~~~~~l~pa-----l~~d~-----~~~y~~g~~~vk~~hdg~~~ffll~v~g~y~~~~~~-~~~c 215 (321)
.|++|+++.+|++++..+++|.|+ +|+++ ..++...+|+|||+|||++|||||+.+.+|++...+ ...|
T Consensus 11 ~~~~d~~~~~W~~ap~~~v~L~~~~~~~p~~~~~~~~~~~~~~~~~~v~VkAa~dg~~i~f~l~W~D~t~~~~~~~~~f~ 90 (214)
T 2ivf_C 11 ELLLDLDAPIWAGAESTTFEMFPTPLVMVKEVSPFLALSEGHGVIKRLDVAALHNGSMIALRLKWASEKHDKIVDLNSFV 90 (214)
T ss_dssp HHHTCTTCHHHHTSCEEEEECEECCGGGGTTTCTTGGGCCSCCCCCEEEEEEEECSSEEEEEEEEECCCCCSCCSTTCCC
T ss_pred cccCCCChHHHhcCCceEEEccCCccccccccccccccccCCCCceEEEEEEEECCCeEEEEEEECCCCCCccccccccC
Confidence 568999999999999999999999 88887 788999999999999999999999999999998777 7779
Q ss_pred CceeeeeeecCCceeeecCCCCCCCCcccccccCCceeeEEEEEeccccCceecCCCCCCCCCCCCCCcccccee
Q 020804 216 PSIALMFQIGEDATYHNMGGCKEGIGSCTSKTCKGHEVDIMHFSIGSAIPGRLYGGNPVDNSEGNGGDRFGHLVD 290 (321)
Q Consensus 216 ~svalmf~~g~~a~y~nmggc~~~~~~c~~~~c~g~evdi~hf~i~~aipgr~yg~n~~d~~~g~g~d~~g~l~d 290 (321)
..||+||++|++++|+.||. .|++|||+||..+. |.++|..++| ||++.+
T Consensus 91 D~vAvmfp~~~~~~~~~MG~-------------~~~~vdiw~Wka~~---------~~~~~~~a~G---fgs~~~ 140 (214)
T 2ivf_C 91 DGVGAMFPVARGAQAVTMGA-------------TGRPVNAWYWKANA---------NEPMEIVAEG---FSAVRR 140 (214)
T ss_dssp CEEEEEEESSTTCCGGGTCB-------------TTBCEEEEEEETTC---------SSCEEEEESS---TTSEEE
T ss_pred ceEEEEeEcCCCCcccccCC-------------CCcEEEEEEEecCC---------CcceeeccCC---cccccc
Confidence 99999999999999999994 67999999999875 3577777766 999887
No 2
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=96.84 E-value=0.00021 Score=49.18 Aligned_cols=32 Identities=16% Similarity=0.059 Sum_probs=22.9
Q ss_pred CCCCccceEEEeehhhHHHHHHHHHHHhhhee
Q 020804 80 KGKHSNLILLFGIGTGLLITAIISVLIICSCA 111 (321)
Q Consensus 80 KkKklS~iaIVGIaVG~vilLLL~VliLcLC~ 111 (321)
.++.+|..+|.||++|.++.+++++.+++|+.
T Consensus 4 ~~~~ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 4 VSRGLTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp SSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 34567899999999999986655545444443
No 3
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=96.13 E-value=0.0014 Score=46.62 Aligned_cols=34 Identities=15% Similarity=-0.008 Sum_probs=16.8
Q ss_pred cceEEEeehhhHHHHH-HHHHHHhhheeecccCCC
Q 020804 85 NLILLFGIGTGLLITA-IISVLIICSCAFRRRNSK 118 (321)
Q Consensus 85 S~iaIVGIaVG~vilL-LL~VliLcLC~~Rrkkkk 118 (321)
+..+|++-++|+++++ ++++++.++.++||++||
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 3455666666655543 333334444444444444
No 4
>1i82_A Xylanase A, endo-1,4-beta-xylanase A; cellobiose complex, hydrolase; HET: BGC; 1.90A {Thermotoga maritima} SCOP: b.1.9.2 PDB: 1i8a_A* 1i8u_A
Probab=96.09 E-value=0.0073 Score=50.55 Aligned_cols=90 Identities=19% Similarity=0.272 Sum_probs=55.8
Q ss_pred EEEeeCceeeecCCCCC-cccccCccccccccCCCCCCCCCCCCeeEEEEeecCccEEEEEEecCceeeecC-CcccCCc
Q 020804 140 LAEFKPGLITLDGHADD-WEDIDGSEFSLLPALDPHAEHEYKGGKMNVKALHDGHDVYFLLQVDGEYVYSKG-ENTRCPS 217 (321)
Q Consensus 140 ~a~~~pg~~tldg~~~d-w~~i~~~~~~l~pal~~d~~~~y~~g~~~vk~~hdg~~~ffll~v~g~y~~~~~-~~~~c~s 217 (321)
+|....|.|+|||..+| |+..+-......- .+...+.=+-+||++||++.+|++++|--+.-.... .--.--+
T Consensus 2 ~a~~~~~~~~IDG~ld~~W~~a~~~~~~~~~-----~g~~~~~~~t~~~~~~d~~~LYv~~~v~D~~~~~~~~~~~~~D~ 76 (189)
T 1i82_A 2 VATAKYGTPVIDGEIDEIWNTTEEIETKAVA-----MGSLDKNATAKVRVLWDENYLYVLAIVKDPVLNKDNSNPWEQDS 76 (189)
T ss_dssp EEEEEECCCCSSSSCCGGGGGSCEEECCEEE-----ESCTTTSCEEEEEEEECSSEEEEEEEEECSSCCCCSSSGGGSSE
T ss_pred eeeeccCCceECCccchhhccCccEeeeeee-----cCCcCCCCcEEEEEEEcCCceEEEEEEECCCcccCCCCCccCCe
Confidence 36667889999999998 9987763321111 122223447899999999999999999776543211 1111234
Q ss_pred eeeeeee-cCCceeeecC
Q 020804 218 IALMFQI-GEDATYHNMG 234 (321)
Q Consensus 218 valmf~~-g~~a~y~nmg 234 (321)
|-+.+.- ++..+||+.+
T Consensus 77 veifid~~~~~~~~y~~~ 94 (189)
T 1i82_A 77 VEIFIDENNHKTGYYEDD 94 (189)
T ss_dssp EEEEEETTCCCCSSCCTT
T ss_pred EEEEECCCCCCCcccccc
Confidence 5555443 3444577654
No 5
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=95.47 E-value=0.0031 Score=44.96 Aligned_cols=36 Identities=14% Similarity=0.054 Sum_probs=18.4
Q ss_pred ccceEEEeehhhHHHHHHH-HHHHhhheeecccCCCC
Q 020804 84 SNLILLFGIGTGLLITAII-SVLIICSCAFRRRNSKA 119 (321)
Q Consensus 84 lS~iaIVGIaVG~vilLLL-~VliLcLC~~Rrkkkka 119 (321)
++..+|++-++|+++++++ .+++.++.++||+++|+
T Consensus 7 s~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 7 ARTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 3556677777776654333 33334444444444443
No 6
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=95.29 E-value=0.0031 Score=45.02 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=16.8
Q ss_pred eEEEeehhhHHHHHHHHHHHhhheeecccCCC
Q 020804 87 ILLFGIGTGLLITAIISVLIICSCAFRRRNSK 118 (321)
Q Consensus 87 iaIVGIaVG~vilLLL~VliLcLC~~Rrkkkk 118 (321)
..|+|+++|.++++++.++++++.++||.++|
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~~k 43 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRRQQKIR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCC
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehhhhhcc
Confidence 34777888844444444444444444444443
No 7
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=92.36 E-value=0.024 Score=59.03 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=0.0
Q ss_pred CCCccceEEEeehhhHHHHHHHHHHHhhhee
Q 020804 81 GKHSNLILLFGIGTGLLITAIISVLIICSCA 111 (321)
Q Consensus 81 kKklS~iaIVGIaVG~vilLLL~VliLcLC~ 111 (321)
.-.++.++|+||.+|.+++|+++++++|++|
T Consensus 699 ~~~l~~~aii~il~~~~~ll~~~ll~~~~~~ 729 (880)
T 1q55_A 699 VGGFDLPIILVILGSVLALLILFLLLLLFLK 729 (880)
T ss_dssp -------------------------------
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3457788899888887766555544444333
No 8
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=92.26 E-value=0.03 Score=37.74 Aligned_cols=14 Identities=7% Similarity=-0.076 Sum_probs=5.7
Q ss_pred ceEEEeehhhHHHH
Q 020804 86 LILLFGIGTGLLIT 99 (321)
Q Consensus 86 ~iaIVGIaVG~vil 99 (321)
..+|++.+++++++
T Consensus 12 ~~~I~~~vv~Gv~l 25 (41)
T 2k9y_A 12 NLAVIGGVAVGVVL 25 (41)
T ss_dssp STHHHHHHHHHHHH
T ss_pred eEEEEeehhHHHHH
Confidence 34444334444433
No 9
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=90.17 E-value=0.1 Score=38.58 Aligned_cols=35 Identities=23% Similarity=0.189 Sum_probs=19.6
Q ss_pred ccceEEEeehhhHHHHHHHHHHHhhheeecccCCC
Q 020804 84 SNLILLFGIGTGLLITAIISVLIICSCAFRRRNSK 118 (321)
Q Consensus 84 lS~iaIVGIaVG~vilLLL~VliLcLC~~Rrkkkk 118 (321)
...+.|+..++|+++++.+++.++.-|-|-||+|+
T Consensus 10 vp~wiIi~svl~GLllL~li~~~LwK~GFFkR~~~ 44 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNRP 44 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCC
Confidence 34666665666666655555555555554444443
No 10
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=88.04 E-value=0.13 Score=38.07 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=18.9
Q ss_pred ceEEEeehhhHHHHHHHHHHHhhheeecccCCCCC
Q 020804 86 LILLFGIGTGLLITAIISVLIICSCAFRRRNSKAS 120 (321)
Q Consensus 86 ~iaIVGIaVG~vilLLL~VliLcLC~~Rrkkkka~ 120 (321)
.+.|+.-++|+++++.+++.++.-|-|-||+||..
T Consensus 9 ~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~~~~ 43 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKK 43 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCcch
Confidence 56666555666665555555555555544444433
No 11
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=86.27 E-value=0.38 Score=37.30 Aligned_cols=30 Identities=13% Similarity=0.036 Sum_probs=13.8
Q ss_pred ehhhHHHHHHHHHH-HhhheeecccCCCCCC
Q 020804 92 IGTGLLITAIISVL-IICSCAFRRRNSKASP 121 (321)
Q Consensus 92 IaVG~vilLLL~Vl-iLcLC~~Rrkkkka~~ 121 (321)
|++|+++.+|+... .|++|.+++.+||+++
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrqAe 42 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQAE 42 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSSCT
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 56666664443333 2333443444444444
No 12
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=82.72 E-value=0.26 Score=33.04 Aligned_cols=25 Identities=24% Similarity=0.309 Sum_probs=18.6
Q ss_pred CccceEEEeehhhHHHHHHHHHHHh
Q 020804 83 HSNLILLFGIGTGLLITAIISVLII 107 (321)
Q Consensus 83 klS~iaIVGIaVG~vilLLL~VliL 107 (321)
++|..+|+||++|.+++.+++.+.+
T Consensus 3 ~L~~gaIaGIVvgdi~~t~~i~~~v 27 (33)
T 2l34_A 3 TVSPGVLAGIVVGDLVLTVLIALAV 27 (33)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcceEEeEeHHHHHHHHHHHHHH
Confidence 4678899999999998666553433
No 13
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=80.75 E-value=0.51 Score=33.17 Aligned_cols=34 Identities=24% Similarity=0.201 Sum_probs=18.2
Q ss_pred ccceEEEeehhhHHHHHHHHHHHhhheeecccCC
Q 020804 84 SNLILLFGIGTGLLITAIISVLIICSCAFRRRNS 117 (321)
Q Consensus 84 lS~iaIVGIaVG~vilLLL~VliLcLC~~Rrkkk 117 (321)
...+.|+.-++|+++++.+++.++.-|-|-||+|
T Consensus 8 vp~wiIi~s~l~GLllL~li~~~LwK~GFFkR~~ 41 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNR 41 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 3466666555666655555545555454444443
No 14
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=76.82 E-value=0.61 Score=33.23 Aligned_cols=27 Identities=19% Similarity=0.253 Sum_probs=20.1
Q ss_pred cceEEEeehhhHHHHHHHHHHHhhhee
Q 020804 85 NLILLFGIGTGLLITAIISVLIICSCA 111 (321)
Q Consensus 85 S~iaIVGIaVG~vilLLL~VliLcLC~ 111 (321)
|+.+++|+.++++.++.++|+-+++.+
T Consensus 15 srga~iGL~v~gVai~~vIVvsl~mlR 41 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVIVITLVMLK 41 (43)
Confidence 678888999888877777766665544
No 15
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=73.19 E-value=1.2 Score=29.74 Aligned_cols=19 Identities=5% Similarity=0.025 Sum_probs=12.5
Q ss_pred ceEEEeehhhHHHHHHHHH
Q 020804 86 LILLFGIGTGLLITAIISV 104 (321)
Q Consensus 86 ~iaIVGIaVG~vilLLL~V 104 (321)
..-+.+|++|.+..+++++
T Consensus 9 ~~~~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 9 GSGNLAVIGGVAVGVVLLL 27 (41)
T ss_dssp CCSSTHHHHHHHHHHHHHH
T ss_pred CCceEEEEeehhHHHHHHH
Confidence 5666766667766666655
No 16
>1cd1_A CD1, MCD1D.1; immunology, MHC, TCR, glycoprotein, signal, immunoglobulin fold, T-cell; 2.67A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=72.66 E-value=0.74 Score=41.99 Aligned_cols=10 Identities=10% Similarity=0.312 Sum_probs=6.5
Q ss_pred EEEEEecCCC
Q 020804 40 LLNFTWFEPP 49 (321)
Q Consensus 40 VINVTwF~P~ 49 (321)
-|+|+|++-+
T Consensus 214 ~i~v~W~~~g 223 (315)
T 1cd1_A 214 PVWVMWMRGD 223 (315)
T ss_dssp CEEEEEEETT
T ss_pred CcEEEEEEcc
Confidence 4678887543
No 17
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=68.14 E-value=2.2 Score=33.28 Aligned_cols=16 Identities=13% Similarity=0.459 Sum_probs=8.3
Q ss_pred ccCCCCCCCcccCCcc
Q 020804 114 RRNSKASPKETESGKW 129 (321)
Q Consensus 114 rkkkka~~~~~~~~~~ 129 (321)
++|+++..-++|.|.+
T Consensus 45 ~qk~r~~~p~~e~g~~ 60 (72)
T 2jo1_A 45 NQQQRTGEPDEEEGTF 60 (72)
T ss_dssp CTTTSSSCCCTTTSTH
T ss_pred CCCCCCCCCccccccH
Confidence 4444444556666644
No 18
>1s7q_A H-2KB, H-2 class I histocompatibility antigen, K-B alpha chain; LCMV, MHC class I, immune escape, immune system; 1.99A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1s7r_A 1s7s_A 1s7t_A 1bii_A 3qul_A 1s7v_A 1s7w_A 1s7x_A 3quk_A 1s7u_A 1nez_A*
Probab=65.10 E-value=1.3 Score=41.28 Aligned_cols=16 Identities=6% Similarity=0.027 Sum_probs=0.0
Q ss_pred cceEEEeehhhHHHHH
Q 020804 85 NLILLFGIGTGLLITA 100 (321)
Q Consensus 85 S~iaIVGIaVG~vilL 100 (321)
+.+.||||++|.++++
T Consensus 279 ~~~~~~~i~~~~~~l~ 294 (348)
T 1s7q_A 279 STVSNMATVAVLVVLG 294 (348)
T ss_dssp ----------------
T ss_pred CcccEEEEEeehhhHH
Confidence 4577788888866543
No 19
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=64.07 E-value=2.1 Score=30.41 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=15.9
Q ss_pred ehhhHHHHHHHHHHHhhheeecccCCCC
Q 020804 92 IGTGLLITAIISVLIICSCAFRRRNSKA 119 (321)
Q Consensus 92 IaVG~vilLLL~VliLcLC~~Rrkkkka 119 (321)
|+.|.+-+++++++.+.+..+.||||..
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 4444454555555555566666766654
No 20
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=63.72 E-value=3.5 Score=29.08 Aligned_cols=31 Identities=16% Similarity=0.303 Sum_probs=17.9
Q ss_pred EEeehhhHHHHHHHHHHHhhheee-cccCCCC
Q 020804 89 LFGIGTGLLITAIISVLIICSCAF-RRRNSKA 119 (321)
Q Consensus 89 IVGIaVG~vilLLL~VliLcLC~~-Rrkkkka 119 (321)
+-+|++|.+..++++++++.+..+ .|+||++
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 346666666667777665544444 4555543
No 21
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=63.40 E-value=2 Score=36.34 Aligned_cols=25 Identities=20% Similarity=0.299 Sum_probs=18.3
Q ss_pred cceEEEeehhhHHHHHHHHHHHhhh
Q 020804 85 NLILLFGIGTGLLITAIISVLIICS 109 (321)
Q Consensus 85 S~iaIVGIaVG~vilLLL~VliLcL 109 (321)
|+.+++|+.+|+++++.++|+.+.+
T Consensus 28 ~~~a~igL~v~~vai~~viVv~l~v 52 (122)
T 2lp1_A 28 NKGAIIGLMVGGVVIATVIVITLVM 52 (122)
Confidence 5668899998888776666555555
No 22
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=62.11 E-value=2.2 Score=29.85 Aligned_cols=17 Identities=6% Similarity=0.177 Sum_probs=9.2
Q ss_pred HHHHHhhheeecccCCC
Q 020804 102 ISVLIICSCAFRRRNSK 118 (321)
Q Consensus 102 L~VliLcLC~~Rrkkkk 118 (321)
+++++++|...++||.|
T Consensus 21 ~iisLIiLi~~w~qKPr 37 (39)
T 2l6w_A 21 TIISLIILIMLWQKKPR 37 (39)
Confidence 33345555555666665
No 23
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=52.76 E-value=4.1 Score=31.52 Aligned_cols=12 Identities=8% Similarity=0.243 Sum_probs=5.1
Q ss_pred cceEEEeehhhH
Q 020804 85 NLILLFGIGTGL 96 (321)
Q Consensus 85 S~iaIVGIaVG~ 96 (321)
+.++|++-++|+
T Consensus 9 n~~~Iv~gvi~g 20 (79)
T 2knc_B 9 DILVVLLSVMGA 20 (79)
T ss_dssp CSHHHHHHHHHH
T ss_pred CchhhHHHHHHH
Confidence 345554333333
No 24
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=52.32 E-value=5.9 Score=28.06 Aligned_cols=29 Identities=28% Similarity=0.259 Sum_probs=15.4
Q ss_pred eehhhHHHHHHHHHHHhhheee-cccCCCC
Q 020804 91 GIGTGLLITAIISVLIICSCAF-RRRNSKA 119 (321)
Q Consensus 91 GIaVG~vilLLL~VliLcLC~~-Rrkkkka 119 (321)
+|++|.+..++++++++.+..+ .|+||++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4555555456666555544333 5665554
No 25
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=51.93 E-value=4.5 Score=27.57 Aligned_cols=7 Identities=14% Similarity=0.335 Sum_probs=2.8
Q ss_pred EEeehhh
Q 020804 89 LFGIGTG 95 (321)
Q Consensus 89 IVGIaVG 95 (321)
|++.++|
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 3333444
No 26
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=49.95 E-value=1.4 Score=34.10 Aligned_cols=24 Identities=8% Similarity=0.178 Sum_probs=12.0
Q ss_pred EEeehhhHHHHHHHHHHHhhheeec
Q 020804 89 LFGIGTGLLITAIISVLIICSCAFR 113 (321)
Q Consensus 89 IVGIaVG~vilLLL~VliLcLC~~R 113 (321)
|.+|+.| +++.+|++.+++||.+|
T Consensus 10 ~~~Iv~g-vi~gilliGllllliwk 33 (79)
T 2knc_B 10 ILVVLLS-VMGAILLIGLAALLIWK 33 (79)
T ss_dssp SHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred chhhHHH-HHHHHHHHHHHHHHHHH
Confidence 4444444 44545554555555554
No 27
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=39.92 E-value=14 Score=28.73 Aligned_cols=18 Identities=17% Similarity=0.351 Sum_probs=10.1
Q ss_pred hhhHHHHHHHHHHHhhhe
Q 020804 93 GTGLLITAIISVLIICSC 110 (321)
Q Consensus 93 aVG~vilLLL~VliLcLC 110 (321)
++|.++++++.++++.+|
T Consensus 73 ii~~iv~~il~ii~~~~~ 90 (91)
T 3hd7_A 73 ILGVICAIILIIIIVYFS 90 (91)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 445555555555666665
No 28
>3aqp_A Probable secdf protein-export membrane protein; translocon, cell membrane, MEM protein transport, translocation, transmembrane, transport; 3.30A {Thermus thermophilus} PDB: 2rrn_A
Probab=39.90 E-value=6.4 Score=40.44 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=13.4
Q ss_pred eEEEeehhhHHHHHHHHHHHhhheeecccCCCCCCCcccCC
Q 020804 87 ILLFGIGTGLLITAIISVLIICSCAFRRRNSKASPKETESG 127 (321)
Q Consensus 87 iaIVGIaVG~vilLLL~VliLcLC~~Rrkkkka~~~~~~~~ 127 (321)
.+++|++++.+..++++=.++.++.+|+++++++.+|+||-
T Consensus 700 ~~~~Gl~~~~~~sl~l~Pal~~~~~~~~~~~~~~~~~~~~~ 740 (741)
T 3aqp_A 700 AIFVGIFVGTYSSIYVVSALVVAWKNRRKAQEASKAHHHHH 740 (741)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccccccC
Confidence 34455555555444444334455556777777777887763
No 29
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=37.34 E-value=10 Score=29.21 Aligned_cols=9 Identities=33% Similarity=0.242 Sum_probs=3.8
Q ss_pred EeehhhHHH
Q 020804 90 FGIGTGLLI 98 (321)
Q Consensus 90 VGIaVG~vi 98 (321)
.|++.++++
T Consensus 20 gGLifA~vL 28 (67)
T 2jp3_A 20 GGLIFGGLL 28 (67)
T ss_dssp HHHHHHHHH
T ss_pred cchhhHHHH
Confidence 344444443
No 30
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=37.23 E-value=7.1 Score=40.78 Aligned_cols=12 Identities=50% Similarity=1.030 Sum_probs=0.0
Q ss_pred CCccccceeeee
Q 020804 282 GDRFGHLVDVYA 293 (321)
Q Consensus 282 ~d~~g~l~d~ya 293 (321)
|-||-+|-|+|.
T Consensus 863 gprF~~LA~~~~ 874 (880)
T 1q55_A 863 GSRFRKLADMYG 874 (880)
T ss_dssp ------------
T ss_pred chhhHHHHHHhC
Confidence 345666666554
No 31
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=36.69 E-value=15 Score=30.08 Aligned_cols=18 Identities=17% Similarity=0.351 Sum_probs=9.2
Q ss_pred hhhHHHHHHHHHHHhhhe
Q 020804 93 GTGLLITAIISVLIICSC 110 (321)
Q Consensus 93 aVG~vilLLL~VliLcLC 110 (321)
++|.++++||+++++.+|
T Consensus 101 ii~~iv~iii~iIi~~~c 118 (119)
T 2kog_A 101 ILGVICAIILIIIIVYFS 118 (119)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhee
Confidence 344555555555555555
No 32
>2k9p_A Pheromone alpha factor receptor; GPCR, micelle, structurral biology, fragment, G-protein COUP receptor, glycoprotein, membrane; NMR {Saccharomyces cerevisiae}
Probab=34.95 E-value=22 Score=27.67 Aligned_cols=15 Identities=33% Similarity=0.660 Sum_probs=8.3
Q ss_pred EEeehhhHHHHHHHH
Q 020804 89 LFGIGTGLLITAIIS 103 (321)
Q Consensus 89 IVGIaVG~vilLLL~ 103 (321)
+-|.-+|+.++++++
T Consensus 24 ~~G~~iGAs~lllii 38 (80)
T 2k9p_A 24 LFGVRSGAAALTLIV 38 (80)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 345556776555544
No 33
>2cqw_A Sushi domain containing 2; somatomedin_B-like domain, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=33.36 E-value=6.9 Score=31.24 Aligned_cols=16 Identities=31% Similarity=0.929 Sum_probs=13.4
Q ss_pred ceEEEEEEecCCCCCC
Q 020804 37 DYKLLNFTWFEPPAPS 52 (321)
Q Consensus 37 DYkVINVTwF~P~~PS 52 (321)
|+.|+|++||.|.-|+
T Consensus 67 df~v~~~~~~~~~~~~ 82 (84)
T 2cqw_A 67 DFVVQHLKWTDPSGPS 82 (84)
T ss_dssp CCCCCCCCCCCCCCCC
T ss_pred eeEEeeecccCCCCCC
Confidence 7899999999877665
No 34
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=30.59 E-value=11 Score=35.35 Aligned_cols=16 Identities=31% Similarity=0.524 Sum_probs=0.0
Q ss_pred hheeecccCCCCCCCc
Q 020804 108 CSCAFRRRNSKASPKE 123 (321)
Q Consensus 108 cLC~~Rrkkkka~~~~ 123 (321)
|.|+.+|+|||+---|
T Consensus 487 C~C~~~r~RR~~~~~~ 502 (510)
T 4grv_A 487 CLCPGWRHRRKAHHHH 502 (510)
T ss_dssp ----------------
T ss_pred hcCCCCCCCCcccccc
Confidence 3344345555544333
No 35
>1q2j_A MU-conotoxin SMIIIA; HET: PCA; NMR {Synthetic} SCOP: j.30.1.1 PDB: 2yen_A*
Probab=30.23 E-value=30 Score=22.25 Aligned_cols=19 Identities=32% Similarity=0.812 Sum_probs=16.9
Q ss_pred CCCCCCCCcccccccCCce
Q 020804 234 GGCKEGIGSCTSKTCKGHE 252 (321)
Q Consensus 234 ggc~~~~~~c~~~~c~g~e 252 (321)
++|=+.+.-|.++-|++|-
T Consensus 1 ~~CC~~pngCs~rWCrdha 19 (26)
T 1q2j_A 1 ERCCNGRRGCSSRWCRDHS 19 (26)
T ss_dssp CCSCSSSSCCCSSSSSSSS
T ss_pred CCccCCCCcccchhhcccc
Confidence 5788999999999999984
No 36
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=29.93 E-value=15 Score=28.80 Aligned_cols=8 Identities=13% Similarity=0.256 Sum_probs=3.5
Q ss_pred EeehhhHH
Q 020804 90 FGIGTGLL 97 (321)
Q Consensus 90 VGIaVG~v 97 (321)
.|++.+++
T Consensus 22 gGLifA~v 29 (74)
T 2zxe_G 22 VGLIVAAV 29 (74)
T ss_dssp HHHHHHHH
T ss_pred ccchhHHH
Confidence 34444444
No 37
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=29.20 E-value=39 Score=26.84 Aligned_cols=27 Identities=22% Similarity=0.433 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhhheeecccCCCCCCC
Q 020804 96 LLITAIISVLIICSCAFRRRNSKASPK 122 (321)
Q Consensus 96 ~vilLLL~VliLcLC~~Rrkkkka~~~ 122 (321)
.++++|-.++..|.|.+|-+|--+++.
T Consensus 22 iavaalg~li~gcwcylrlqri~qsed 48 (90)
T 1zza_A 22 IAIAALGALILGCWCYLRLQRISQSED 48 (90)
T ss_dssp HHHHHHHHHHHHHHTTTSSCSSCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 334444555667888888777666554
No 38
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=23.30 E-value=28 Score=23.61 Aligned_cols=11 Identities=0% Similarity=0.069 Sum_probs=4.5
Q ss_pred ehhhHHHHHHH
Q 020804 92 IGTGLLITAII 102 (321)
Q Consensus 92 IaVG~vilLLL 102 (321)
.++|+++..++
T Consensus 12 aIAGiVvG~v~ 22 (38)
T 2k1k_A 12 EIVAVIFGLLL 22 (38)
T ss_dssp HHHHHHHHHHH
T ss_pred ceeeeehHHHH
Confidence 34444443333
No 39
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A
Probab=21.48 E-value=24 Score=35.17 Aligned_cols=50 Identities=34% Similarity=0.751 Sum_probs=31.0
Q ss_pred ccccCceecCC-CCCCCCCCCCCC-------------cc--ccceeeeecCCcccccCCCCCCCCCcccccc
Q 020804 261 GSAIPGRLYGG-NPVDNSEGNGGD-------------RF--GHLVDVYAWTPHCRYLDGMGPSGIKLNHFRS 316 (321)
Q Consensus 261 ~~aipgr~yg~-n~~d~~~g~g~d-------------~~--g~l~d~yawnphcr~~dg~~p~~~~~~~~~~ 316 (321)
|.+|=|..||. .++.|.+|-=.| || |..+|.|-|. |||||...-....+.
T Consensus 49 gr~iy~gi~~~~s~~~~~~G~R~dv~~alk~l~~~~lR~PGG~~~~~y~W~------d~iGP~~~Rp~~~~~ 114 (504)
T 3ug3_A 49 GRCIYGGIYEEGSPLSDERGFRKDVLEAVKRIKVPNLRWPGGNFVSNYHWE------DGIGPKDQRPVRFDL 114 (504)
T ss_dssp TTSTBTTTBCTTCTTBCTTSBBHHHHHHHHHTTCSEEEESCSGGGGGCCGG------GGCSSGGGSCCEEET
T ss_pred hccccccccCCCCCCccccCcHHHHHHHHHhcCCCeEEeCCCcccCcchhc------cCcCChHHCCCCccc
Confidence 33344444542 446666665444 67 8899998774 899998755544443
No 40
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=21.01 E-value=42 Score=23.19 Aligned_cols=12 Identities=8% Similarity=0.243 Sum_probs=5.6
Q ss_pred cceEEEeehhhH
Q 020804 85 NLILLFGIGTGL 96 (321)
Q Consensus 85 S~iaIVGIaVG~ 96 (321)
|..+|++-++|+
T Consensus 8 n~~~Iv~gvi~~ 19 (43)
T 2k9j_B 8 DILVVLLSVMGA 19 (43)
T ss_dssp HHHHHHHHHHHH
T ss_pred CEeehHHHHHHH
Confidence 455555334443
Done!